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Sample records for cotyledon primordium formation

  1. The lateral root initiation index: an integrative measure of primordium formation

    Science.gov (United States)

    Dubrovsky, J. G.; Soukup, A.; Napsucialy-Mendivil, S.; Jeknić, Z.; Ivanchenko, M. G.

    2009-01-01

    Background and Aims Lateral root initiation is an essential and continuous process in the formation of root systems; therefore, its quantitative analysis is indispensable. In this study a new measure of lateral root initiation is proposed and analysed, namely the lateral root initiation index (ILRI), which defines how many lateral roots and/or primordia are formed along a parent-root portion corresponding to 100 cortical cells in a file. Methods For data collection, a commonly used root clearing procedure was employed, and a new simple root clearing procedure is also proposed. The ILRI was determined as 100dl, where d is the density of lateral root initiation events (number mm−1) and l is the average fully elongated cortical cell length (mm). Key Results Analyses of different Arabidopsis thaliana genotypes and of a crop plant, tomato (Solanum lycopersicum), showed that ILRI is a more precise parameter than others commonly used as it normalizes root growth for variations in cell length. Lateral root primordium density varied in the A. thaliana accessions Col, Ler, Ws, and C24; however, in all accessions except Ws, ILRI was similar under the same growth conditions. The nitrogen/carbon ratio in the growth medium did not change the lateral root primordium density but did affect ILRI. The ILRI was also modified in a number of auxin-related mutants, revealing new root branching phenotypes in some of these mutants. The rate of lateral root initiation increased with Arabidopsis seedling age; however, ILRI was not changed in plants between 8 and 14 d post-germination. Conclusions The ILRI allows for a more precise comparison of lateral root initiation under different growth conditions, treatments, genotypes and plant species than other comparable methods. PMID:19151042

  2. Rhizobium nod factors reactivate the cell cycle during infection and nodule primordium formation, but the cycle is only completed in primordium formation.

    NARCIS (Netherlands)

    Yang, W.C.; Blank, de C.; Meskiene, I.; Hirt, H.; Bakker, J.; Kammen, van A.; Franssen, H.; Bisseling, T.

    1994-01-01

    Rhizobia induce the formation of root nodules on the roots of leguminous plants. In temperate legumes, nodule organogenesis starts with the induction of cell divisions in regions of the root inner cortex opposite protoxylem poles, resulting in the formation of nodule primordia. It has been postulate

  3. Ultrastructural features of the differentiating thyroid primordium in the sand lizard (Lacerta agilis L.) from the differentiation of the cellular cords to the formation of the follicular lumen.

    Science.gov (United States)

    Rupik, Weronika; Kowalska, Magdalena; Swadźba, Elwira; Maślak, Robert

    2016-04-01

    The differentiation of the thyroid primordium of lacertilian species is poorly understood. The present study reports on the ultrastructural analysis of the developing thyroid primordium in the sand lizard (Lacerta agilis) during the early stages of differentiation. The early thyroid primordium of sand lizard embryos was composed of cellular cords that contained single cells with a giant lipid droplet, which were eliminated by specific autophagy (lipophagy). The follicular lumens at the periphery of the primordium differentiated even before the division of the cellular cords. When the single cells within the cords started to die through paraptosis, the adjacent cells started to polarise and junctional complexes began to form around them. After polarisation and clearing up after the formation of the lumens, the cellular cords divided into definitive follicles. The cellular cords in the central part of the primordium started to differentiate later than those at the periphery. The cellular cords divided into presumptive follicles first and only later differentiated into definitive follicles. During this process, a population of centrally located cells was removed through apoptosis to form the lumen. Although the follicular lumen in sand lizard embryos is differentiated by cavitation similar to that in the grass snake, there were very important differences during the early stages of the differentiation of the cellular cords and the formation of the thyroid follicles.

  4. 5D imaging via light sheet microscopy reveals cell dynamics during the eye-antenna disc primordium formation in Drosophila

    Science.gov (United States)

    Huang, Yu Shan; Ku, Hui Yu; Tsai, Yun Chi; Chang, Chin Hao; Pao, Sih Hua; Sun, Y. Henry; Chiou, Arthur

    2017-03-01

    5D images of engrailed (en) and eye gone (eyg) gene expressions during the course of the eye-antenna disc primordium (EADP) formation of Drosophila embryos from embryonic stages 13 through 16 were recorded via light sheet microscopy and analyzed to reveal the cell dynamics involved in the development of the EADP. Detailed analysis of the time-lapsed images revealed the process of EADP formation and its invagination trajectory, which involved an inversion of the EADP anterior-posterior axis relative to the body. Furthermore, analysis of the en-expression pattern in the EADP provided strong evidence that the EADP is derived from one of the en-expressing head segments.

  5. Organogenesis and plant formation from cotyledon and callus culture of rape

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    Janina H. Rogozińska

    2014-01-01

    Full Text Available Cotyledon explants of rape were excised from aseptically germinated seedlings and cultured during 2 weeks on M u r a s h i g e and S k o o g medium supplemented with auxins, cytokinins, auxin-cytokinin combinations and abscisic acid. Callus formation occurred on medium with 2,4-dichlorophenoxyacetic acid (2,4-D, naphthalene-l-acetic acid (NAA, indole-3-acetic acid (IAA and on their combinations with kinetin (K or 6-benzylaminopurine (BAP. Regeneration of roots was achieved on media with NAA, IAA and indole-3-butyric acid (IBA and on combinations of these auxins with cytokinins. The presence of 2,4-D in the medium, though it promoted compact callus growth, had an inhibitory effect on root formation. Callus derived from the cotyledons had somewhat different requirements for growth in subculture and the root formation ability diminished in the course of the culture. Lower ABA concentrations stimulated callus growth whereas higher concentrations inhibited it similary as in the case of cotyledons. Shoot buds regenerated from the cotyledons after ca. 3 weeks on media supplemented with NAA + BAP. The 9-week-old plantlets transferred to the soil developed into complete plants. The plants which underwent vernalization formed flowers and normal seeds.

  6. Aescin formation in calli and embryoids from cotyledon and stem explants of Aesculus hippocastanum L.

    Science.gov (United States)

    Profumo, P; Caviglia, A M; Gastaldo, P

    1994-11-01

    Aescin in calli and embryoids obtained from both cotyledon and stem explants of Aesculus hippocastanum were investigated by HPLC. Determinations were carried out on tissues cultured in agarized medium supplemented with growth substances (2,4-dichlorophenoxyacetic acid; kinetin; 1-naphthaleneacetic acid). The results indicate that aescin was produced in all the analysed samples. The amount of active principle present in some samples was higher than that found in horse-chestnut seeds.

  7. The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis

    NARCIS (Netherlands)

    Vroemen, C.W.; Mordhorst, A.P.; Albrecht, C.; Kwaaitaal, M.A.C.J.; Vries, de S.C.

    2003-01-01

    From an enhancer trap screen for genes expressed in Arabidopsis embryos, we identified a gene expressed from the octant stage onward in the boundary between the two presumptive cotyledons and in a variety of postembryonic organ and meristem boundaries. This gene, CUP-SHAPED COTYLEDON3 (CUC3),

  8. The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis

    DEFF Research Database (Denmark)

    Vroemen, Casper W; Mordhorst, Andreas P; Albrecht, Cathy

    2003-01-01

    From an enhancer trap screen for genes expressed in Arabidopsis embryos, we identified a gene expressed from the octant stage onward in the boundary between the two presumptive cotyledons and in a variety of postembryonic organ and meristem boundaries. This gene, CUP-SHAPED COTYLEDON3 (CUC3......), encodes a putative NAC-domain transcription factor that is homologous with CUC1 and CUC2. Analysis of a CUC3 hypomorph and a putative cuc3 null mutant indicates that CUC3 function is partially redundant with that of CUC1 and CUC2 in the establishment of the cotyledon boundary and the shoot meristem, thus...... revealing an even higher degree of redundancy in this class of genes than was thought previously. The CUC3 expression pattern, the cuc3 phenotypes, and CUC3 expression in a series of shoot meristem mutants and transgenes suggest a primary role for CUC3 in the establishment of boundaries that contain cells...

  9. Primordium formation in Hydropus subalpinus (Tricholomatales, Basidiomycetes)

    NARCIS (Netherlands)

    Clémençon, H.

    2004-01-01

    Hydropus subalpinus is exocarpic amphiblemate. The pubescence of the stipe is a cauloblema that sometimes forms a spurious partial veil in young primordia. The pileoblema becomes a gelatinised pileipellis with a few more or less erect cells on the pileus and a few layers of periclinal physalohyphae

  10. Two ways of plant regeneration from immature cotyledons of pea

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    Anna Nadolska-Orczyk

    2014-01-01

    Full Text Available Two different systems of plant regeneration via organogenesis and embryogenesis from immature cotyledons of pea (Pisum sativum L. were developed. The first system was direct multiple shoot regeneration from the proximal to the embryo axis, injured part of cotyledon. The ability of six Polish cultivars to shoot formation was very high. The percent of regenerating cotyledons was from 73 to 86 and mean number of shoots from 3.5 to 9.9 after seven weeks of culture. This multiplification could be prolonged for next several months. The second system was somatic embryogenesis, initiating from the same part of cotyledon simultaneously with slowly proliferating callus. Only three out of six cultivars formed embryoids. The differences of ability to embryo formation ranged between 43% of responding explants for Heiga cultivar to only 6% for Cud Ameryki. The mean number of embryoids was from 4.2 to 2.3.

  11. Molecular cloning and characterization of the genes encoding an auxin efflux carrier and the auxin influx carriers associated with the adventitious root formation in mango (Mangifera indica L.) cotyledon segments.

    Science.gov (United States)

    Li, Yun-He; Zou, Ming-Hong; Feng, Bi-Hong; Huang, Xia; Zhang, Zhi; Sun, Guang-Ming

    2012-06-01

    Polar auxin transport (PAT) plays an important role in the adventitious root formation of mango cotyledon segments, but the molecular mechanism remains unclear. In this study, we cloned a gene encoding an auxin efflux carrier (designated as MiPIN1), and we cloned four genes encoding auxin influx carriers (designated as MiAUX1, MiAUX2, MiAUX3 and MiAUX4). The results of a phylogenetic tree analysis indicated that MiPIN1 and the MiAUXs belong to plant PIN and AUXs/LAXs groups. Quantitative real-time PCR indicated that the expression of MiPIN1 and the MiAUXs was lowest at 0 days but sharply increased on and after day 4. During the root formation in the mango cotyledon segments, the MiPIN1 expression in the distal cut surface (DCS) was always higher than the expression in the proximal cut surface (PCS) whereas the expression of the MiAUXs in the PCS was usually higher than in the DCS. This expression pattern might be result in the PAT from the DCS to the PCS, which is essential for the adventitious root formation in the PCS. Our previous study indicated that a pre-treatment of embryos with indole-3-butyric acid (IBA) significantly promoted adventitious rooting in PCS whereas a pre-treatment with 2,3,5-triiodobenzoic acid (TIBA) completely inhibited this rooting. In this study, however, IBA and TIBA pre-treatments slightly changed the expression of MiPIN1. In contrast, while the MiAUX3 and MiAUX4 expression levels were significantly up-regulated by the IBA pre-treatment, the expression levels were down-regulated by the TIBA pre-treatment. These findings imply that MiAUX3 and MiAUX4 are more sensitive to the IBA and TIBA treatments and that they might play important roles during adventitious root formation in mango cotyledon segments. Copyright © 2012 Elsevier Masson SAS. All rights reserved.

  12. 芒果子叶切段不定根形成的影响因素分析%Factors of Influencing Adventitious Root Formation of Cotyledon Segments in Mango

    Institute of Scientific and Technical Information of China (English)

    李运合; 马杰; 吴永杰; 孙光明

    2011-01-01

    In order to research the factors of influencing adventitious rooting from cut surface of mango cotyledon segments, the segments' rooting abilities of different collect time,different lengths,different cut positions and different varieties were examined. The results showed that rooting ability of cotyledon segments increased with the increase of maturity of fruits, there was no root formation at the 2 cm cotyledon segments from the embryos of 50 and 60 days after flowering. At 70 days after flowering,there was adventitious root formed on PCS (proximal cut surface), the percentage rooting was 28.6%;After that, the rooting ability was increased sharply and reached to 76.7% at 90 days after flowering, but then kept at a steady level until matured at 110 days after flowering. The length (2.0,1.0,0.5 and 0.2 cm) of cotyledon segment from maturated fruits was closely related with the rooting ability:there was no root formed on 0.2 cm segment, whereas roots formed on the other three length segments and the rooting ability increased with the increase of lengths. Compared the rooting abilities of Mangifera indica L. var. Zihua,M. indica L. var. Okrong and Mangifera indica L. var. Zill,all of them were almost same. Cut position of cotyledon segment (i. e. ,close to the proximal or not) has little effect on the rooting.%分别用不同成熟时间、不同取材部位、不同品种、不同大小的芒果子叶切段为外植体进行不定根的诱导,以探讨影响芒果子叶切段不定根形成能力的原因.结果表明,芒果子叶切段的生根能力随着芒果成熟度的增加而逐渐提高,花后50和60 d的2.0 cm长子叶切段都无不定根形成,从花后70 d开始有不定根形成,此时生根率为28.6%,之后其生根能力迅速提高,在花后90 d生根率达到76.7%,之后生根率稳定保持直到110 d果实成熟.成熟芒果的子叶切段长度(2.0、1.0、0.5和0.2 cm)对不定根的形成有显著影响,0.2 cm的子叶切

  13. api, A novel Medicago truncatula symbiotic mutant impaired in nodule primordium invasion.

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    Teillet, Alice; Garcia, Joseph; de Billy, Françoise; Gherardi, Michèle; Huguet, Thierry; Barker, David G; de Carvalho-Niebel, Fernanda; Journet, Etienne-Pascal

    2008-05-01

    Genetic approaches have proved to be extremely useful in dissecting the complex nitrogen-fixing Rhizobium-legume endosymbiotic association. Here we describe a novel Medicago truncatula mutant called api, whose primary phenotype is the blockage of rhizobial infection just prior to nodule primordium invasion, leading to the formation of large infection pockets within the cortex of noninvaded root outgrowths. The mutant api originally was identified as a double symbiotic mutant associated with a new allele (nip-3) of the NIP/LATD gene, following the screening of an ethylmethane sulphonate-mutagenized population. Detailed characterization of the segregating single api mutant showed that rhizobial infection is also defective at the earlier stage of infection thread (IT) initiation in root hairs, as well as later during IT growth in the small percentage of nodules which overcome the primordium invasion block. Neither modulating ethylene biosynthesis (with L-alpha-(2-aminoethoxyvinylglycine or 1-aminocyclopropane-1-carboxylic acid) nor reducing ethylene sensitivity in a skl genetic background alters the basic api phenotype, suggesting that API function is not closely linked to ethylene metabolism or signaling. Genetic mapping places the API gene on the upper arm of the M. truncatula linkage group 4, and epistasis analyses show that API functions downstream of BIT1/ERN1 and LIN and upstream of NIP/LATD and the DNF genes.

  14. Early-born neurons in type II neuroblast lineages establish a larval primordium and integrate into adult circuitry during central complex development in Drosophila.

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    Riebli, Nadia; Viktorin, Gudrun; Reichert, Heinrich

    2013-04-23

    The central complex is a multimodal information-processing center in the insect brain composed of thousands of neurons representing more than 50 neural types arranged in a stereotyped modular neuroarchitecture. In Drosophila, the development of the central complex begins in the larval stages when immature structures termed primordia are formed. However, the identity and origin of the neurons that form these primordia and, hence, the fate of these neurons during subsequent metamorphosis and in the adult brain, are unknown. Here, we used two pointed-Gal4 lines to identify the neural cells that form the primordium of the fan-shaped body, a major component of the Drosophila central complex. We found that these early-born primordium neurons are generated by four identified type II neuroblasts that amplify neurogenesis through intermediate progenitors, and we demonstrate that these neurons generate the fan-shaped body primordium during larval development in a highly specific manner. Moreover, we characterize the extensive growth and differentiation that these early-born primordium neurons undergo during metamorphosis in pupal stages and show that these neurons persist in the adult central complex, where they manifest layer-specific innervation of the mature fan-shaped body. Taken together, these findings indicate that early-born neurons from type II neuroblast lineages have dual roles in the development of a complex brain neuropile. During larval stages they contribute to the formation of a specific central complex primordium; during subsequent pupal development they undergo extensive growth and differentiation and integrate into the modular circuitry of the adult brain central complex.

  15. Histology of Organogenic and Embryogenic Responses in Cotyledons of Somatic Embryos of Quercus Suber L.

    Science.gov (United States)

    Puigderrajols; Celestino; Suils; Toribio; Molinas

    2000-05-01

    In cork oak (Quercus suber L.), recurrent embryogenesis is produced in vitro through autoembryony without exogenous plant growth regulators (PGRs); secondary embryos appear on the embryo axis but seldom on cotyledons. Focusing mainly on the histological origin of neoformations, we investigated the influence of the embryo axis and exogenous PGRs on the embryogenic potential of somatic embryo cotyledons. Isolated cotyledons of somatic embryos became necrotic when cultured on PGR-free medium but gave secondary embryos when cultured on media containing benzyladenine and naphthaleneacetic acid. Cotyledons of cork oak somatic embryos are competent to give embryogenic responses. Isolated cotyledons without a petiole showed a lower percentage of embryogenic response than did those with a petiole. In petioles, somatic embryos arose from inner parenchyma tissues following a multicellular budding pattern. Joined to the embryo axis, cotyledons did not show morphogenic responses when cultured on PGR-free medium but revealed budlike and phylloid formations when cultured on medium with PGRs. The different morphogenic behavior displayed by somatic cotyledons indicates an influence of the embryo axis and indicates a relationship between organogenic and embryogenic regeneration pathways.

  16. Molecular dissection of the migrating posterior lateral line primordium during early development in zebrafish

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    Villablanca Eduardo J

    2010-12-01

    Full Text Available Abstract Background Development of the posterior lateral line (PLL system in zebrafish involves cell migration, proliferation and differentiation of mechanosensory cells. The PLL forms when cranial placodal cells delaminate and become a coherent, migratory primordium that traverses the length of the fish to form this sensory system. As it migrates, the primordium deposits groups of cells called neuromasts, the specialized organs that contain the mechanosensory hair cells. Therefore the primordium provides both a model for studying collective directional cell migration and the differentiation of sensory cells from multipotent progenitor cells. Results Through the combined use of transgenic fish, Fluorescence Activated Cell Sorting and microarray analysis we identified a repertoire of key genes expressed in the migrating primordium and in differentiated neuromasts. We validated the specific expression in the primordium of a subset of the identified sequences by quantitative RT-PCR, and by in situ hybridization. We also show that interfering with the function of two genes, f11r and cd9b, defects in primordium migration are induced. Finally, pathway construction revealed functional relationships among the genes enriched in the migrating cell population. Conclusions Our results demonstrate that this is a robust approach to globally analyze tissue-specific expression and we predict that many of the genes identified in this study will show critical functions in developmental events involving collective cell migration and possibly in pathological situations such as tumor metastasis.

  17. Low-temperature effect on enzyme activities involved in sucrose-starch partitioning in salt-stressed and salt-acclimated cotyledons of quinoa (Chenopodium quinoa Willd.) seedlings.

    Science.gov (United States)

    Rosa, Mariana; Hilal, Mirna; González, Juan A; Prado, Fernando E

    2009-04-01

    The effect of low temperature on growth, sucrose-starch partitioning and related enzymes in salt-stressed and salt-acclimated cotyledons of quinoa (Chenopodium quinoa Willd.) was studied. The growth of cotyledons and growing axes in seedlings grown at 25/20 degrees C (light/dark) and shifted to 5/5 degrees C was lower than in those only growing at 25/20 degrees C (unstressed). However, there were no significant differences between low-temperature control and salt-treated seedlings. The higher activities of sucrose phosphate synthase (SPS, EC 2.4.1.14) and soluble acid invertase (acid INV, EC 3.2.1.25) were observed in salt-stressed cotyledons; however, the highest acid INV activity was observed in unstressed cotyledons. ADP-glucose pyrophosphorylase (ADP-GPPase, EC 2.7.7.27) was higher in unstressed cotyledons than in stressed ones. However, between 0 and 4days the highest value was observed in salt-stressed cotyledons. The lowest value of ADP-GPPase was observed in salt-acclimated cotyledons. Low temperature also affected sucrose synthase (SuSy, EC 2.4.1.13) activity in salt-treated cotyledons. Sucrose and glucose were higher in salt-stressed cotyledons, but fructose was essentially higher in low-temperature control. Starch was higher in low-temperature control; however, the highest content was observed at 0day in salt-acclimated cotyledons. Results demonstrated that low temperature induces different responses on sucrose-starch partitioning in salt-stressed and salt-acclimated cotyledons. Data also suggest that in salt-treated cotyledons source-sink relations (SSR) are changed in order to supply soluble sugars and proline for the osmotic adjustment. Relationships between starch formation and SuSy activity are also discussed.

  18. The Nogo-C2/Nogo receptor complex regulates the morphogenesis of zebrafish lateral line primordium through modulating the expression of dkk1b, a Wnt signal inhibitor.

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    Hao-Wei Han

    Full Text Available The fish lateral line (LL is a mechanosensory system closely related to the hearing system of higher vertebrates, and it is composed of several neuromasts located on the surface of the fish. These neuromasts can detect changes in external water flow, to assist fish in maintaining a stationary position in a stream. In the present study, we identified a novel function of Nogo/Nogo receptor signaling in the formation of zebrafish neuromasts. Nogo signaling in zebrafish, like that in mammals, involves three ligands and four receptors, as well as three co-receptors (TROY, p75, and LINGO-1. We first demonstrated that Nogo-C2, NgRH1a, p75, and TROY are able to form a Nogo-C2 complex, and that disintegration of this complex causes defective neuromast formation in zebrafish. Time-lapse recording of the CldnB::lynEGFP transgenic line revealed that functional obstruction of the Nogo-C2 complex causes disordered morphogenesis, and reduces rosette formation in the posterior LL (PLL primordium during migration. Consistent with these findings, hair-cell progenitors were lost from the PLL primordium in p75, TROY, and Nogo-C2/NgRH1a morphants. Notably, the expression levels of pea3, a downstream marker of Fgf signaling, and dkk1b, a Wnt signaling inhibitor, were both decreased in p75, TROY, and Nogo-C2/NgRH1a morphants; moreover, dkk1b mRNA injection could rescue the defects in neuromast formation resulting from knockdown of p75 or TROY. We thus suggest that a novel Nogo-C2 complex, consisting of Nogo-C2, NgRH1a, p75, and TROY, regulates Fgf signaling and dkk1b expression, thereby ensuring stable organization of the PLL primordium.

  19. Cell cycling and patterned cell proliferation in the wing primordium of Drosophila.

    OpenAIRE

    1996-01-01

    The pattern of cell proliferation in the Drosophila imaginal wing primordium is spatially and temporally heterogeneous. Direct visualization of cells in S, G2, and mitosis phases of the cell cycle reveals several features invariant throughout development. The fraction of cells in the disc in the different cell cycle stages is constant, the majority remaining in G1. Cells in the different phases of the cell cycle mainly appear in small synchronic clusters that are nonclonally derived but resul...

  20. Morphological aspects of starch and cell wall material mobilization in developing lupine cotyledons and the effect of kinetin on these processes

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    Fortunat Młodzianowski

    2015-01-01

    Full Text Available In the cotyledons of dry lupine seeds the presence of starch was not demonstrated. Its formation during seed imbibition in darkness is accompanied by a reduction in the thickness of cell walls containing hemicelluloses. It is believed that the products of hemicellulose hydrolysis, particullarily in isolated cotyledons, arę the main source of materials for the synthesis of starch, In the process of cell wall decomposition the invaginations of plasmalemma appear to be involved. Kinetin enhance the hydrolysis of cell walls and the mobilization of starch in isolated cotyledons.

  1. Aminopeptidase activity from germinated jojoba cotyledons.

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    Johnson, R; Storey, R

    1985-11-01

    One major and two minor aminopeptidase activities from germinated jojoba (Simmondsia chinensis) cotyledon extracts were separated by ammonium sulfate precipitation and chromatofocusing. None of the activities were inhibited by 1,10 phenanthroline.The major aminopeptidase, purified 260-fold, showed a pH optimum of 6.9 with leucine-p-nitroanilide as substrate, a molecular weight estimated at 14,200 by electrophoretic analysis, and an isoelectric point of 4.5 according to the chromatofocusing pattern. Activity was inhibited by p-chloromercuribenzoate, slightly stimulated by 1,10 phenanthroline and 2-mercaptoethanol, and not influenced by Mg(2+) or diethyl pyrocarbonate. Inhibition by p-chloromercuribenzoate was prevented by the presence of cysteine in the assay. Leucine-p-nitroanilide and leucine-beta-naphthylamide were the most rapidly hydrolyzed of 11 carboxy-terminal end blocked synthetic substrates tested. No activity on endopeptidase or carboxypeptidase specific substrates was detected. The major aminopeptidase showed activity on a saline soluble, jojoba seed protein preparation and we suggest a possible physiological role for the enzyme in the concerted degradation of globulin reserve proteins during cotyledon senescence.

  2. Enzymic Synthesis of Caffeoylglucaric Acid from Chlorogenic Acid and Glucaric Acid by a Protein Preparation from Tomato Cotyledons 1

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    Strack, Dieter; Gross, Wiltrud; Wray, Victor; Grotjahn, Lutz

    1987-01-01

    The phenylpropane metabolism of tomato (Lycopersicon esculentum Mill) cotyledons was investigated. The HPLC analysis revealed two hydroxycinnamic-acid conjugates as major components, identified as chlorogenic acid (5-O-caffeoylquinic acid) and caffeoylglucaric acid (2-O- or 5-O-caffeoyl-glucaric acid). Quantitative analyses indicated a precursor-product relationship between the chlorogenic and caffeoylglucaric acids. Protein preparations from tomato cotyledons were found to catalyze the formation of caffeoylglucaric acid with chlorogenic acid as acyl donor and free glucaric acid as acceptor molecule. This enzyme activity, possibly to be classified as hydroxycinnamoylquinic acid:glucaric acid hydroxycinnamoyltransferase, acts together with hydroxycinnamoyl-CoA: quinic acid hydroxycinnamoyltransferase. PMID:16665274

  3. The lung primordium an outpouching from the foregut! Evidence-based dogma or myth?

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    Brown, Ediel; James, Kenneth

    2009-03-01

    This study examines and challenges the "evidence-based legitimacy" of the theory, "the lung primordium is an outpouching from the foregut." A literature review was undertaken using computer database, journals, and relevant anatomical and embryological texts. The independent path of development taken by the tracheobronchial system and the oesophagus once identified as separate entities; the lack of morphologic, molecular, biological, and genetic supportive evidence for the "common-origin" theory; the distinct longitudinal line of demarcation between the nonsegmented muscles of the esophagus and the highly segmented cartilaginous structure of the tracheobronchial tree; the absence of a tracheoesophageal septum in the process of separation; the differences in epithelial lining; and the diametrically opposed mucociliary cascade of the upper airway vs the mucociliary escalator of the tracheobronchial tree all seriously challenge the authenticity of a common origin to these 2 entities. To the extent that the foregut is seen as consisting of 2 separate semitubular splanchnopleuric entities ventrodorsally juxtaposed, it is true that the lung primordium as an outpouching of, and not from, the foregut. This must never be confused with the notion that the esophagus and tracheobronchial tree have a common origin. In fact, they develop from 2 completely separate segments of the trilaminar germ disk, but because of head fold development are brought together to create a common tracheoesophageal chamber that is later separated, facilitated by the prochordal membrane diverticulum.

  4. An Improved Bioassay for Cytokinins Using Cucumber Cotyledons 1

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    Fletcher, R. A.; Kallidumbil, V.; Steele, P.

    1982-01-01

    The cucumber cotyledon greening bioassay is frequently used for detecting cytokinins. Beneficial modifications of the original technique included using 5-day-old cucumber (Cucumus sativus L., cv. National Pickling) cotyledons treated with combinations of 40 millimolar KCl and various concentrations of cytokinins. A dark incubation period of 20 hours was followed by an exposure to light for 3.5 hours. Under these conditions, extremely low (0.0001 milligram per liter) concentrations of N6-benzyladenine, zeatin, kinetin, or zeatin riboside can be detected. Of the four cytokinins tested, kinetin appeared to be the least active. With these improvements, the assay is 10 times more sensitive than is the previously described cucumber cotyledon greening bioassay for cytokinins. PMID:16662273

  5. An improved bioassay for cytokinins using cucumber cotyledons.

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    Fletcher, R A; Kallidumbil, V; Steele, P

    1982-03-01

    The cucumber cotyledon greening bioassay is frequently used for detecting cytokinins. Beneficial modifications of the original technique included using 5-day-old cucumber (Cucumus sativus L., cv. National Pickling) cotyledons treated with combinations of 40 millimolar KCl and various concentrations of cytokinins. A dark incubation period of 20 hours was followed by an exposure to light for 3.5 hours. Under these conditions, extremely low (0.0001 milligram per liter) concentrations of N(6)-benzyladenine, zeatin, kinetin, or zeatin riboside can be detected. Of the four cytokinins tested, kinetin appeared to be the least active. With these improvements, the assay is 10 times more sensitive than is the previously described cucumber cotyledon greening bioassay for cytokinins.

  6. Comparative transcriptomic analysis of developing cotton cotyledons and embryo axis.

    Directory of Open Access Journals (Sweden)

    Xiaoming Jiao

    Full Text Available BACKGROUND: As a by product of higher value cotton fibre, cotton seed has been increasingly recognised to have excellent potential as a source of additional food, feed, biofuel stock and even a renewable platform for the production of many diverse biological molecules for agriculture and industrial enterprises. The large size difference between cotyledon and embryo axis that make up a cotton seed results in the under-representation of embryo axis gene transcript levels in whole seed embryo samples. Therefore, the determination of gene transcript levels in the cotyledons and embryo axes separately should lead to a better understanding of metabolism in these two developmentally diverse tissues. RESULTS: A comparative study of transcriptome changes between cotton developing cotyledon and embryo axis has been carried out. 17,384 unigenes (20.74% of all the unigenes were differentially expressed in the two adjacent embryo tissues, and among them, 7,727 unigenes (44.45% were down-regulated and 9,657 unigenes (55.55% were up-regulated in cotyledon. CONCLUSIONS: Our study has provided a comprehensive dataset that documents the dynamics of the transcriptome at the mid-maturity of cotton seed development and in discrete seed tissues, including embryo axis and cotyledon tissues. The results showed that cotton seed is subject to many transcriptome variations in these two tissue types and the differential gene expression between cotton embryo axis and cotyledon uncovered in our study should provide an important starting point for understanding how gene activity is coordinated during seed development to make a seed. Further, the identification of genes involved in rapid metabolite accumulation stage of seed development will extend our understanding of the complex molecular and cellular events in these developmental processes and provide a foundation for future studies on the metabolism, embryo differentiation of cotton and other dicot oilseed crops.

  7. The Drosophila DOCK family protein Sponge is required for development of the air sac primordium.

    Science.gov (United States)

    Morishita, Kazushge; Anh Suong, Dang Ngoc; Yoshida, Hideki; Yamaguchi, Masamitsu

    2017-05-15

    Dedicator of cytokinesis (DOCK) family genes are known as DOCK1-DOCK11 in mammals. DOCK family proteins mainly regulate actin filament polymerization and/or depolymerization and are GEF proteins, which contribute to cellular signaling events by activating small G proteins. Sponge (Spg) is a Drosophila counterpart to mammalian DOCK3/DOCK4, and plays a role in embryonic central nervous system development, R7 photoreceptor cell differentiation, and adult thorax development. In order to conduct further functional analyses on Spg in vivo, we examined its localization in third instar larval wing imaginal discs. Immunostaining with purified anti-Spg IgG revealed that Spg mainly localized in the air sac primordium (ASP) in wing imaginal discs. Spg is therefore predicted to play an important role in the ASP. The specific knockdown of Spg by the breathless-GAL4 driver in tracheal cells induced lethality accompanied with a defect in ASP development and the induction of apoptosis. The monitoring of ERK signaling activity in wing imaginal discs by immunostaining with anti-diphospho-ERK IgG revealed reductions in the ERK signal cascade in Spg knockdown clones. Furthermore, the overexpression of D-raf suppressed defects in survival and the proliferation of cells in the ASP induced by the knockdown of Spg. Collectively, these results indicate that Spg plays a critical role in ASP development and tracheal cell viability that is mediated by the ERK signaling pathway. Copyright © 2017 Elsevier Inc. All rights reserved.

  8. Influence of kinetin on storage protein mobilization and ultrastructure of plastids in excised lupine cotyledons grown in darkness

    Directory of Open Access Journals (Sweden)

    Marlena Jakubek

    2015-01-01

    Full Text Available Storage protein disappeared first from the peripheral and later from central parts of the lupine cotyledon. Kinetin (500 μM stimulated this process; its effect was most prominent after longer times of incubation. In plastids large, crystalline prolamellar bodies were observed. They some-times split into smaller parts during the course of the experiment, especially in the kinetin-treated material. Kinetin in darkness did not stimulate formation of thylakoid membranes (neither grana nor primary lamellae.

  9. IN VITRO REGENERATION CASTOR (RICINUS COMMUNIS L.) USING COTYLEDON EXPLANTS

    Science.gov (United States)

    A novel plant regeneration protocol was established for castor (Ricinus communis L.), an important oilseed crop. Mature seed-derived cotyledon explants produced adventitious shoots when placed on Murashige and Skoog (MS) medium containing thidiazuron (TDZ). The rate of shoot regeneration was maximal...

  10. Apparent Catalase Synthesis in Sunflower Cotyledons during the Change in Microbody Function: A Mathematical Approach for the Quantitative Evaluation of Density-labeling Data.

    Science.gov (United States)

    Betsche, T; Gerhardt, B

    1978-10-01

    Density-labeling with 10 mm K(15)NO(3)/70% (2)H(2)O has been used to investigate catalase synthesis in different developmental stages of sunflower (Helianthus annuus L.) cotyledons. A mathematical approach is introduced for the quantitative evaluation of the density-labeling data. The method allows, in the presence of preexisting enzyme activity, calculation of this synthesized activity (apparent enzyme synthesis) which results from the balance between actual enzyme synthesis and the degradation of newly synthesized enzyme at a given time. During greening of the cotyledons, when the catalase activity declines and the population of leaf peroxisomes is formed, the apparent catalase synthesis is lower than, or at best equal to, that occurring during a developmental stage when the leaf peroxisome population is established and catalase synthesis and degradation of total catalase are in equilibrium. This result suggests a formation, in fatty cotyledons, of the leaf peroxisomes by transformation of the glyoxysomes rather than by de novo synthesis.

  11. Leading and trailing cells cooperate in collective migration of the zebrafish posterior lateral line primordium.

    Science.gov (United States)

    Dalle Nogare, Damian; Somers, Katherine; Rao, Swetha; Matsuda, Miho; Reichman-Fried, Michal; Raz, Erez; Chitnis, Ajay B

    2014-08-01

    Collective migration of cells in the zebrafish posterior lateral line primordium (PLLp) along a path defined by Cxcl12a expression depends on Cxcr4b receptors in leading cells and on Cxcr7b in trailing cells. Cxcr7b-mediated degradation of Cxcl12a by trailing cells generates a local gradient of Cxcl12a that guides PLLp migration. Agent-based computer models were built to explore how a polarized response to Cxcl12a, mediated by Cxcr4b in leading cells and prevented by Cxcr7b in trailing cells, determines unidirectional migration of the PLLp. These chemokine signaling-based models effectively recapitulate many behaviors of the PLLp and provide potential explanations for the characteristic behaviors that emerge when the PLLp is severed by laser to generate leading and trailing fragments. As predicted by our models, the bilateral stretching of the leading fragment is lost when chemokine signaling is blocked in the PLLp. However, movement of the trailing fragment toward the leading cells, which was also thought to be chemokine dependent, persists. This suggested that a chemokine-independent mechanism, not accounted for in our models, is responsible for this behavior. Further investigation of trailing cell behavior shows that their movement toward leading cells depends on FGF signaling and it can be re-oriented by exogenous FGF sources. Together, our observations reveal the simple yet elegant manner in which leading and trailing cells coordinate migration; while leading cells steer PLLp migration by following chemokine cues, cells further back play follow-the-leader as they migrate toward FGFs produced by leading cells. © 2014. Published by The Company of Biologists Ltd.

  12. Leading and trailing cells cooperate in collective migration of the zebrafish posterior lateral line primordium

    Science.gov (United States)

    Dalle Nogare, Damian; Somers, Katherine; Rao, Swetha; Matsuda, Miho; Reichman-Fried, Michal; Raz, Erez; Chitnis, Ajay B.

    2014-01-01

    Collective migration of cells in the zebrafish posterior lateral line primordium (PLLp) along a path defined by Cxcl12a expression depends on Cxcr4b receptors in leading cells and on Cxcr7b in trailing cells. Cxcr7b-mediated degradation of Cxcl12a by trailing cells generates a local gradient of Cxcl12a that guides PLLp migration. Agent-based computer models were built to explore how a polarized response to Cxcl12a, mediated by Cxcr4b in leading cells and prevented by Cxcr7b in trailing cells, determines unidirectional migration of the PLLp. These chemokine signaling-based models effectively recapitulate many behaviors of the PLLp and provide potential explanations for the characteristic behaviors that emerge when the PLLp is severed by laser to generate leading and trailing fragments. As predicted by our models, the bilateral stretching of the leading fragment is lost when chemokine signaling is blocked in the PLLp. However, movement of the trailing fragment toward the leading cells, which was also thought to be chemokine dependent, persists. This suggested that a chemokine-independent mechanism, not accounted for in our models, is responsible for this behavior. Further investigation of trailing cell behavior shows that their movement toward leading cells depends on FGF signaling and it can be re-oriented by exogenous FGF sources. Together, our observations reveal the simple yet elegant manner in which leading and trailing cells coordinate migration; while leading cells steer PLLp migration by following chemokine cues, cells further back play follow-the-leader as they migrate toward FGFs produced by leading cells. PMID:25063456

  13. Nitric Oxide Synthase-Mediated Phytoalexin Accumulation in Soybean Cotyledons in Response to the Diaporthe phaseolorum f. sp. meridionalis Elicitor1

    Science.gov (United States)

    Modolo, Luzia Valentina; Cunha, Fernando Queiroz; Braga, Márcia Regina; Salgado, Ione

    2002-01-01

    Phytoalexin biosynthesis is part of the defense mechanism of soybean (Glycine max) plants against attack by the fungus Diaporthe phaseolorum f. sp. meridionalis (Dpm), the causal agent of stem canker disease. The treatment of soybean cotyledons with Dpm elicitor or with sodium nitroprusside (SNP), a nitric oxide (NO) donor, resulted in a high accumulation of phytoalexins. This response did not occur when SNP was replaced by ferricyanide, a structural analog of SNP devoid of the NO moiety. Phytoalexin accumulation induced by the fungal elicitor, but not by SNP, was prevented when cotyledons were pretreated with NO synthase (NOS) inhibitors. The Dpm elicitor also induced NOS activity in soybean tissues proximal to the site of inoculation. The induced NOS activity was Ca2+- and NADPH-dependent and was sensitive to the NOS inhibitors NG-nitro-l-arginine methyl ester, aminoguanidine, and l-N6-(iminoethyl) lysine. NOS activity was not observed in SNP-elicited tissues. An antibody to brain NOS labeled a 166-kD protein in elicited and nonelicited cotyledons. Isoflavones (daidzein and genistein), pterocarpans (glyceollins), and flavones (apigenin and luteolin) were identified after exposure to the elicitor or SNP, although the accumulation of glyceollins and apigenin was limited in SNP-elicited compared with fungal-elicited cotyledons. NOS activity preceded the accumulation of these flavonoids in tissues treated with the Dpm elicitor. The accumulation of these metabolites was faster in SNP-elicited than in fungal-elicited cotyledons. We conclude that the response of soybean cotyledons to Dpm elicitor involves NO formation via a constitutive NOS-like enzyme that triggers the biosynthesis of antimicrobial flavonoids. PMID:12427995

  14. Comparing ultraweak bio-chemiluminescence emission in wounded green and etiolated soybean cotyledons

    Science.gov (United States)

    Chen, WenLi; Zhou, Quan; Li, Ling; Xing, Da; Van Wijk, Roeland; Tang, YongHong

    2006-02-01

    Ultraweak bio-chemiluminescence (UBC) from germinating soybean (Glycine max L. Merr) cotyledon under mechanical wounding was observed by a high sensitivity imaging system based on an intensified charge couple device (ICCD) detector or a high sensitive single photon counter (SPC) device. The UBC imaging showed that the intensity of UBC at the injury location on a wounded green cotyledon was greater than on a wounded etiolated cotyledon. Based on results with a SPC UBC intensity of wounded green cotyledon was high at first and then gradually decreased. The emission spectrum of wounded green cotyledon had a greater proportion of red light. The increase in UBC of wounded etiolated soybean cotyledon was less than that of green ones. The emission spectrum of wounded etiolated cotyledon had a greater amount of orange light. The data suggest that most of the UBC in green cotyledon was due to damaged chloroplasts and mitochondria. Our data suggest that oxidation of damage's tissue lead to the production of ROS. Electronic excitation energy was transfered from the excited molecules by ROS to Chl-a in the thylakoid membranes, so the intensity of UBC in the wounded soybean green cotyledon was obviously higher than in the wounded etiolated soybean cotyledon.

  15. Linear sucrose transport in protoplasts from developing soybean cotyledons.

    Science.gov (United States)

    Lin, W

    1985-07-01

    Previous studies with isolated soybean cotyledon protoplasts revealed the presence of a saturable, simple diffusion, and nonsaturating carrier-mediated uptake of sucrose into soybean cotyledon cells. A proton/sucrose cotransport may be involved in the saturable sucrose uptake (Lin et al. 1984 Plant Physiol 75: 936-940 and Schmitt et al. 1984 Plant Physiol 75: 941-946). In this study, we investigated the linear sucrose uptake mechanism by treating isolated protoplasts with 15 micromolar p-trifluoromethoxy-carbonylcyanide phenylhydrazone (FCCP) or 100 micromolar p-chloromecuribenzenesulfonic acid to eliminate the saturable uptake. We found: (a) increasing external pH decreases the linear sucrose uptake; (b) fusicoccin at 20 micromolar stimulates and FCCP at 15 micromolar inhibits this linear sucrose uptake; and (c) the ratio of the initial influx of proton to sucrose is close to one in both saturable and nondiffusive linear (difference between the total linear and diffusive components) uptakes. The results suggest that a proton/sucrose cotransport is also involved in the nondiffusive linear sucrose uptake into soybean cotyledon cells.

  16. BDNF-TrkB axis regulates migration of the lateral line primordium and modulates the maintenance of mechanoreceptor progenitors.

    Directory of Open Access Journals (Sweden)

    Eugene V Gasanov

    Full Text Available BDNF and its specialized receptor TrkB are expressed in the developing lateral line system of zebrafish, but their role in this organ is unknown. To tackle this problem in vivo, we used transgenic animals expressing fluorescent markers in different cell types of the lateral line and combined a BDNF gain-of-function approach by BDNF mRNA overexpression and by soaking embryos in a solution of BDNF, with a loss-of-function approach by injecting the antisence ntrk2b-morpholino and treating embryos with the specific Trk inhibitor K252a. Subsequent analysis demonstrated that the BDNF-TrkB axis regulates migration of the lateral line primordium. In particular, BDNF-TrkB influences the expression level of components of chemokine signaling including Cxcr4b, and the generation of progenitors of mechanoreceptors, at the level of expression of Atoh1a-Atp2b1a.

  17. Wounding stimulates ALLENE OXIDE SYNTHASE gene and increases the level of jasmonic acid in Ipomoea nil cotyledons

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    Emilia Wilmowicz

    2016-03-01

    Full Text Available Allene oxide synthase (AOS encodes the first enzyme in the lipoxygenase pathway, which is responsible for jasmonic acid (JA formation. In this study we report the molecular cloning and characterization of InAOS from Ipomoea nil. The full-length gene is composed of 1662 bp and encodes for 519 amino acids. The predicted InAOS contains PLN02648 motif, which is evolutionarily conserved and characteristic for functional enzymatic proteins. We have shown that wounding led to a strong stimulation of the examined gene activity in cotyledons and an increase in JA level, which suggest that this compound may be a modulator of stress responses in I. nil.

  18. Ultrastructure study of the excretory system and the genital primordium of the infective stage of Onchocerca volvulus (Nematoda:Filarioidea).

    Science.gov (United States)

    Strote, G; Bonow, I

    1995-01-01

    The electron microscopic investigation of the anterior part of the infective third-stage juvenile of Onchocerca volvulus provides first insights into the structure of the excretory system of this developmental stage of the parasite. The most anterior part of this system consists of a cell process of the syncytial excretory cells. At this height the excretory cells enclose the cuticle-lined excretory channel. The channel is in the process of elongation in the anterior-posterior direction, indicated by cell division in this region. More posteriad an ampulla-like structure is forming in the cytoplasm of the excretory cells. The inner surface of this ampulla is lined with a small number of single microvilli. In this part of the system the cytoplasm of the excretory cells is rich in Golgi bodies and endocytic vesicles. The ampulla has direct access to the exterior by the excretory duct. The excretory duct is a cuticle-lined structure surrounded by supporting fibres of an additional cell. This duct cell connects the excretory duct to the body-wall cuticle at the excretory pore. Adjacent to the region of the excretory system a cell is found that resembles a gland cell. This cell is in close contact to the ventral nerve cord. The genital primordia of the third-stage juvenile consist of several dividing cells. The female genital primordium is seen at the junction of the muscular with the glandular oesophagus and the male primordium can be found at the junction of the glandular oesophagus with the gut.

  19. Characterization of the snowy cotyledon 1 mutant of Arabidopsis thaliana: the impact of chloroplast elongation factor G on chloroplast development and plant vitality.

    Science.gov (United States)

    Albrecht, Verónica; Ingenfeld, Anke; Apel, Klaus

    2006-03-01

    During seedling development chloroplast formation marks the transition from heterotrophic to autotrophic growth. The development and activity of chloroplasts may differ in cotyledons that initially serve as a storage organ and true leaves whose primary function is photosynthesis. A genetic screen was used for the identification of genes that affect selectively chloroplast function in cotyledons of Arabidopsis thaliana. Several mutants exhibiting pale cotyledons and green true leaves were isolated and dubbed snowy cotyledon (sco). One of the mutants, sco1, was characterized in more detail. The mutated gene was identified using map-based cloning. The mutant contains a point mutation in a gene encoding the chloroplast elongation factor G, leading to an amino acid exchange within the predicted 70S ribosome-binding domain. The mutation results in a delay in the onset of germination. At this early developmental stage embryos still contain undifferentiated proplastids, whose proper function seems necessary for seed germination. In light-grown sco1 seedlings the greening of cotyledons is severely impaired, whereas the following true leaves develop normally as in wild-type plants. Despite this apparent similarity of chloroplast development in true leaves of mutant and wild-type plants various aspects of mature plant development are also affected by the sco1 mutation such as the onset of flowering, the growth rate, and seed production. The onset of senescence in the mutant and the wild-type plants occurs, however, at the same time, suggesting that in the mutant this particular developmental step does not seem to suffer from reduced protein translation efficiency in chloroplasts.

  20. Gluconeogenesis from storage wax in the cotyledons of jojoba seedlings.

    Science.gov (United States)

    Moreau, R A; Huang, A H

    1977-08-01

    The cotyledons of jojoba (Simmondsia chinensis) seeds contained 50 to 60% of their weight as intracellular wax esters. During germination there was a gradual decrease in the wax content with a concomitant rise in soluble carbohydrates, suggesting that the wax played the role of a food reserve. Thin layer chromatography revealed that both the fatty alcohol and fatty acid were metabolized. The disappearance of wax was matched with an increase of catalase, a marker enzyme of the gluconeogenic process in other fatty seedlings. Subcellular organelles were isolated by sucrose gradient centrifugation from the cotyledons at the peak stage of germination. The enzymes of the beta oxidation of fatty acid and of the glyoxylate cycle were localized in the glyoxysomes but not in the mitochondria. The glyoxysomes had specific activities of individual enzymes similar to those of the castor bean glyoxysomes. An active alkaline lipase was detected in the wax bodies at the peak stage of germination but not in the ungerminated seeds. No lipase was detected in glyoxysomes or mitochondria. After the wax in the wax bodies had been extracted with diethyl ether, the organelle membrane was isolated and it still retained the alkaline lipase. The gluconeogenesis from wax in the jojoba seedling appears to be similar, but with modification, to that from triglyceride in other fatty seedlings.

  1. Identification of genes associated with cotyledon senescence in upland cotton

    Institute of Scientific and Technical Information of China (English)

    SHEN Fafu; YU Shuxun; XIE Qingen; HAN Xiulan; FAN Shuli

    2006-01-01

    In order to unravel the biochemical pathways and understand the molecular mechanisms involved in leaf senescence, suppression subtractive hybridization (SSH) was used to generate a cDNA library enriched for transcripts differentially expressed in developmental senescence cotyledons of upland cotton. After differential screening by membranebased hybridization and subsequent confirmation by reverse Northern blot analysis, selected 678 clones were sequenced and analyzed. Sequencing of these cDNA fragments reveals that 216 of expressed sequence tags (ESTs) represented unique genes. Of these 216 cDNAs, 151 clones (69.9%) show significant homologies to previously known genes, while the remaining 65 do not match any known sequences.151 unique ESTs are assigned to twelve different categories based on their putative functions generated by BLAST analysis. These SAG-encoded proteins are likely to participate in macromolecule degradation, nutrient recycling, detoxification of oxidative metabolites, and signaling and regulatory events.The expression pattern of selection of genes was confirmed using northern hybridization. Northern hybridization confirmed several distinct patterns,from expression at a very early stage to the terminal phase of the senescence syndrome. Clones encoding proteases and proteins involved in macromolecule degradation and gluconeogenesis, as well as stress-related genes, are up regulated in senescence cotyledons.

  2. Biosynthesis of alpha-Amylase in Vigna mungo Cotyledon.

    Science.gov (United States)

    Tomura, H; Koshiba, T

    1985-12-01

    In vitro translation of RNA extracted from Vigna mungo cotyledons showed that alpha-amylase is synthesized as a polypeptide with a molecular mass of 45,000, while cotyledons contain a form of alpha-amylase with a molecular mass of 43,000. To find out whether the 45,000 molecular mass polypeptide is a precursor to the 43,000 found in vivo, the cell free translation systems were supplemented with canine microsomal membrane; when mRNA was translated in the wheat germ system supplemented with canine microsomes, the 45,000 molecular mass form was not processed to a smaller form but the precursor form was partly processed in the membrane-supplemented reticulocyte lysate system. When V. mungo RNA was translated in Xenopus oocyte system, only the smaller form (molecular mass 43,000) was detected. Involvement of contranslational glycosylation in the maturating process of the alpha-amylase was ruled out because there was no effect of tunicamycin, and the polypeptide was resistant to endo-beta-H or endo-beta-D digestion. We interpret these results to mean that the 45,000 molecular mass form is a precursor with a signal peptide or transit sequence, and that the 43,000 molecular mass is the mature form of the protein.

  3. Biosynthesis of α-Amylase in Vigna mungo Cotyledon 1

    Science.gov (United States)

    Tomura, Hideaki; Koshiba, Tomokazu

    1985-01-01

    In vitro translation of RNA extracted from Vigna mungo cotyledons showed that α-amylase is synthesized as a polypeptide with a molecular mass of 45,000, while cotyledons contain a form of α-amylase with a molecular mass of 43,000. To find out whether the 45,000 molecular mass polypeptide is a precursor to the 43,000 found in vivo, the cell free translation systems were supplemented with canine microsomal membrane; when mRNA was translated in the wheat germ system supplemented with canine microsomes, the 45,000 molecular mass form was not processed to a smaller form but the precursor form was partly processed in the membrane-supplemented reticulocyte lysate system. When V. mungo RNA was translated in Xenopus oocyte system, only the smaller form (molecular mass 43,000) was detected. Involvement of contranslational glycosylation in the maturating process of the α-amylase was ruled out because there was no effect of tunicamycin, and the polypeptide was resistant to endo-β-H or endo-β-D digestion. We interpret these results to mean that the 45,000 molecular mass form is a precursor with a signal peptide or transit sequence, and that the 43,000 molecular mass is the mature form of the protein. Images Fig. 1 Fig. 2 Fig. 3 Fig. 4 PMID:16664549

  4. Cell wall proteins in seedling cotyledons of Prosopis chilensis.

    Science.gov (United States)

    Rodríguez, J G; Cardemil, L

    1994-01-01

    Four cell wall proteins of cotyledons of Prosopis chilensis seedlings were characterized by PAGE and Western analyses using a polyclonal antibody, generated against soybean seed coat extensin. These proteins had M(r)s of 180,000, 126,000, 107,000 and 63,000, as determined by SDS-PAGE. The proteins exhibited a fluorescent positive reaction with dansylhydrazine suggesting that they are glycoproteins; they did not show peroxidase activity. The cell wall proteins were also characterized by their amino acid composition and by their amino-terminal sequence. These analyses revealed that there are two groups of related cell wall proteins in the cotyledons. The first group comprises the proteins of M(r)s 180,000, 126,000, 107,000 which are rich in glutamic acid/glutamine and aspartic acid/asparagine and they have almost identical NH2-terminal sequences. The second group comprises the M(r) 63,000 protein which is rich in proline, glycine, valine and tyrosine, with an NH2-terminal sequence which was very similar to that of soybean proline-rich proteins.

  5. Imunohistochemical Localization of alpha-Amylase in Cotyledons of Vigna mungo Seedlings.

    Science.gov (United States)

    Tomura, H; Koshiba, T; Minamikawa, T

    1985-12-01

    We studied the localization of alpha-amylase with indirect fluorescence microscopy in transversely sectioned cotyledons of Vigna mungo seedlings. Tissue sections were fixed in periodate-lysine-paraformaldehyde and treated with anti-alpha-amylase immunoglobulin G followed by fluorescein isothiocyanate labeled goat anti-rabbit immunoglobulin G. alpha-Amylase appeared in the cells farthest from vascular bundles on the second day of growth and appeared gradually closer to the vascular bundles as growth progressed. The pattern of alpha-amylase appearance was similar in detached cotyledons, indicating that attachment of the embryonic axis has no effect on this pattern. However, in attached cotyledons, alpha-amylase disappeared from the regions where starch grains had been digested, but in detached cotyledons there was no disappearance of alpha-amylase, and digestion was slower than in intact cotyledons.

  6. Imunohistochemical Localization of α-Amylase in Cotyledons of Vigna mungo Seedlings 1

    Science.gov (United States)

    Tomura, Hideaki; Koshiba, Tomokazu; Minamikawa, Takao

    1985-01-01

    We studied the localization of α-amylase with indirect fluorescence microscopy in transversely sectioned cotyledons of Vigna mungo seedlings. Tissue sections were fixed in periodate-lysine-paraformaldehyde and treated with anti-α-amylase immunoglobulin G followed by fluorescein isothiocyanate labeled goat anti-rabbit immunoglobulin G. α-Amylase appeared in the cells farthest from vascular bundles on the second day of growth and appeared gradually closer to the vascular bundles as growth progressed. The pattern of α-amylase appearance was similar in detached cotyledons, indicating that attachment of the embryonic axis has no effect on this pattern. However, in attached cotyledons, α-amylase disappeared from the regions where starch grains had been digested, but in detached cotyledons there was no disappearance of α-amylase, and digestion was slower than in intact cotyledons. Images Fig. 1 Fig. 2 Fig. 3 PMID:16664548

  7. Indoleacetic Acid synthesis in soybean cotyledon callus tissue.

    Science.gov (United States)

    Black, R C; Hamilton, R H

    1976-03-01

    Growth of an auxin-requiring soybean cotyledon callus tissue (Glycine max L., Merr. var. Acme) was promoted by tryptophan, tryptamine, indole, indoleacetamide and, to a very slight degree, anthranilic acid. When tryptophan-3-(14)C was supplied in the growth medium, labeled indoleacetic acid (IAA) was found in both the tissue and the medium. Medium, from which the cells had been removed, was also found to convert labeled tryptophan to IAA. Soybean callus contained 0.044 mumole/g free tryptophan, but this is apparently not available for conversion to IAA. These results suggest that while exogenously supplied trytophan could elevate a specific internal pool where IAA synthesis occurs some of the growth on a tryptophan medium can be accounted for by external conversion.

  8. Indoleacetic Acid Synthesis in Soybean Cotyledon Callus Tissue 1

    Science.gov (United States)

    Black, Robert C.; Hamilton, Robert H.

    1976-01-01

    Growth of an auxin-requiring soybean cotyledon callus tissue (Glycine max L., Merr. var. Acme) was promoted by tryptophan, tryptamine, indole, indoleacetamide and, to a very slight degree, anthranilic acid. When tryptophan-3-14C was supplied in the growth medium, labeled indoleacetic acid (IAA) was found in both the tissue and the medium. Medium, from which the cells had been removed, was also found to convert labeled tryptophan to IAA. Soybean callus contained 0.044 μmole/g free tryptophan, but this is apparently not available for conversion to IAA. These results suggest that while exogenously supplied trytophan could elevate a specific internal pool where IAA synthesis occurs some of the growth on a tryptophan medium can be accounted for by external conversion. PMID:16659498

  9. Basic Endochitinases Are Major Proteins in Castanea sativa Cotyledons.

    Science.gov (United States)

    Collada, C; Casado, R; Fraile, A; Aragoncillo, C

    1992-10-01

    Basic endochitinases are abundant proteins in Castanea sativa Mill. cotyledons. Three basic chitinases were purified with molecular masses of 25, 26, and 32 kD (Ch1, Ch2, and Ch3) and with isoelectric points between 8 and 9.5. Antibodies raised against Ch1 cross-reacted with Ch2 and Ch3. However, Ch3 showed differences when compared with the other two enzymes, especially in its higher cysteine content. The size, amino acid composition, and N-terminal sequence of Ch1 indicate that it is a class II endochitinase and, therefore, has no cysteine-rich hevein domain. Ch1 inhibits the growth of the fungus Trichoderma viride. The biological role of these endochitinases is discussed.

  10. Nitric oxide and iron modulate heme oxygenase activity as a long distance signaling response to salt stress in sunflower seedling cotyledons.

    Science.gov (United States)

    Singh, Neha; Bhatla, Satish C

    2016-02-29

    Nitric oxide is a significant component of iron signaling in plants. Heme is one of the iron sensors in plants. Free heme is highly toxic and can cause cell damage as it catalyzes the formation of reactive oxygen species (ROS). Its catabolism is carried out by heme oxygenase (HOs; EC 1.14.99.3) which uses heme both as a prosthetic group and as a substrate. Two significant events, which accompany adaptation to salt stress in sunflower seedlings, are accumulation of ROS and enhanced production of nitric oxide (NO) in roots and cotyledons. Present investigations on the immunolocalization of heme oxygenase distribution in sunflower seedling cotyledons by confocal laser scanning microscopic (CLSM) imaging provide new information on the differential spatial distribution of the inducible form of HO (HO-1) as a long distance in response to NaCl stress. The enzyme is abundantly distributed in the specialized cells around the secretory canals (SCs) in seedling cotyledons. Abundance of tyrosine nitrated proteins has also been observed in the specialized cells around the secretory canals in cotyledons derived from salt stressed seedlings. The spatial distribution of tyrosine nitrated proteins and HO-1 expression further correlates with the abundance of mitochondria in these cells. Present findings, thus, highlight a link among distribution of HO-1 expression, abundance of tyrosine nitrated proteins and mitochondria in specialized cells around the secretory canal as a long distance mechanism of salt stress tolerance in sunflower seedlings. Enhanced spatial distribution of HO-1 in response to NaCl stress in seedling cotyledons is in congruence with the observed increase in specific activity of HO-1 in NaCl stressed conditions. The enzyme activity is further enhanced by hemin (HO-1 inducer) both in the absence or presence of NaCl stress and inhibited by zinc protoporphyrin. Western blot analysis of cotyledon homogenates using anti-HO-1 polyclonal antibody shows one major band (29

  11. In Vivo Synthesis and Turnover of α-Amylase in Attached and Detached Cotyledons of Vigna mungo Seeds 1

    Science.gov (United States)

    Koshiba, Tomokazu; Minamikawa, Takao

    1983-01-01

    α-Amylase activity increased in attached cotyledons of germinated Vigna mungo seeds until the 5th day after imbibition and decreased thereafter, whereas in detached and incubated cotyledons the activity continuously increased and, at the 6th day, reached the value more than three times that of the maximum activity of attached cotyledons. Zymograms of the activities and Ouchterlony double immunodiffusion test on the activities of attached and detached cotyledons showed that the increase of activity in detached cotyledons was due to the identical enzyme as in attached tissues. α-Amylase contents, determined by single radial immunodiffusion method, changed in parallel with enzyme activity in both attached and detached cotyledons, which also suggested the de novo synthesis of α-amylase in V. mungo cotyledons. The rate of incorporation of the label from [3H]leucine into α-amylase and the ratios of dpm in α-amylase/dpm in trichloroacetic acid-insoluble fraction did not show significant difference between attached and detached cotyledons. The results indicated that in attached cotyledons fluctuation of α-amylase activity was regulated by both synthesis and degradation of the enzyme, whereas in detached cotyledons α-amylase was synthesized and accumulated, because of low degrading activity during incubation. Images Fig. 1 Fig. 2 Fig. 4 PMID:16662780

  12. In Vivo Synthesis and Turnover of alpha-Amylase in Attached and Detached Cotyledons of Vigna mungo Seeds.

    Science.gov (United States)

    Koshiba, T; Minamikawa, T

    1983-01-01

    alpha-Amylase activity increased in attached cotyledons of germinated Vigna mungo seeds until the 5th day after imbibition and decreased thereafter, whereas in detached and incubated cotyledons the activity continuously increased and, at the 6th day, reached the value more than three times that of the maximum activity of attached cotyledons. Zymograms of the activities and Ouchterlony double immunodiffusion test on the activities of attached and detached cotyledons showed that the increase of activity in detached cotyledons was due to the identical enzyme as in attached tissues. alpha-Amylase contents, determined by single radial immunodiffusion method, changed in parallel with enzyme activity in both attached and detached cotyledons, which also suggested the de novo synthesis of alpha-amylase in V. mungo cotyledons.The rate of incorporation of the label from [(3)H]leucine into alpha-amylase and the ratios of dpm in alpha-amylase/dpm in trichloroacetic acid-insoluble fraction did not show significant difference between attached and detached cotyledons. The results indicated that in attached cotyledons fluctuation of alpha-amylase activity was regulated by both synthesis and degradation of the enzyme, whereas in detached cotyledons alpha-amylase was synthesized and accumulated, because of low degrading activity during incubation.

  13. [Use of mesquite cotyledon (Prosopis chilensis (Mol) Shuntz) in the manufacturing of cereal bars].

    Science.gov (United States)

    Estévez, A M; Escobar, B; Ugarte, V

    2000-06-01

    Cereal bars with peanut and walnut has shown to be snack foods of good organoleptic characteristics and high caloric value, due to their content of protein, lipids and carbohydrates. Cotyledons of mezquite seeds have a high protein content which biological quality improves with thermal processing like toasting, microwave or moist heat under pressure. The purposes of this research were to study the use of mezquite cotyledon (Prosopis chilensis (Mol) Stuntz) in cereal bars with two different levels of peanut or walnut; and to determine the effect of two thermal treatment applied on the cotyledon upon the bar characteristics. Twelve different kind of bars were developed through the combination of two levels of peanut or walnut (15% and 18%); the use of mezquite cotyledon (0% and 6%); and the application of two thermal processing to the cotyledon (microwave and toasting). Cereal bars were analysed for chemical, physical and sensory characteristics: moisture, water activity, proximate chemical composition, sensory quality and acceptability. Moisture content of bars with peanut ranged between 10.4% and 10.9%; and for those with walnut, between 10.5% and 12.3%. Protein content was higher in the bars with mezquite cotiledon, being higher those with peanut. Thermal processing did not have any effect on the chemical composition. Bars with mezquite cotyledon treated by microwave showed a higher acceptability.

  14. Direct conversion of root primordium into shoot meristem relies on timing of stem cell niche development.

    Science.gov (United States)

    Rosspopoff, Olga; Chelysheva, Liudmila; Saffar, Julie; Lecorgne, Lena; Gey, Delphine; Caillieux, Erwann; Colot, Vincent; Roudier, François; Hilson, Pierre; Berthomé, Richard; Da Costa, Marco; Rech, Philippe

    2017-04-01

    To understand how the identity of an organ can be switched, we studied the transformation of lateral root primordia (LRP) into shoot meristems in Arabidopsis root segments. In this system, the cytokinin-induced conversion does not involve the formation of callus-like structures. Detailed analysis showed that the conversion sequence starts with a mitotic pause and is concomitant with the differential expression of regulators of root and shoot development. The conversion requires the presence of apical stem cells, and only LRP at stages VI or VII can be switched. It is engaged as soon as cell divisions resume because their position and orientation differ in the converting organ compared with the undisturbed emerging LRP. By alternating auxin and cytokinin treatments, we showed that the root and shoot organogenetic programs are remarkably plastic, as the status of the same plant stem cell niche can be reversed repeatedly within a set developmental window. Thus, the networks at play in the meristem of a root can morph in the span of a couple of cell division cycles into those of a shoot, and back, through transdifferentiation. © 2017. Published by The Company of Biologists Ltd.

  15. Glutamate dehydrogenase from pumpkin cotyledons: characterization and isoenzymes.

    Science.gov (United States)

    Chou, K H; Splittstoesser, W E

    1972-04-01

    Glutamate dehydrogenase from pumpkin (Cucurbita moschata Pior. cultivar Dickinson Field) cotyledons was found in both soluble and particulate fractions with the bulk of the activity in the soluble fraction. Both enzymes used NAD(H) and NADP(H) but NAD(H) was favored. The enzymes were classified as glutamate-NAD oxidoreductase, deaminating (EC 1.4.1.3). Both enzymes were heat stable, had a pH optimum for reductive amination of 8.0, and were inhibited by high concentrations of NH(4) (+) or alpha-ketoglutarate. The soluble enzyme was more sensitive to NH(4) (+) inhibition and was activated by metal ions after ammonium sulfate fractionation while the solubilized particulate enzyme was not. Inhibition by ethylenediaminetetraacetate was restored by several divalent ions and inhibition by p-hydroxymercuribenzoate was reversed by glutathione. Particulate glutamate dehydrogenase showed a greater activity with NADP. The molecular weights of the enzymes are 250,000. Separation of the enzymes by disc gel electrophoresis showed that during germination the soluble isoenzymes increased from 1 to 7 in number, while only one particulate isoenzyme was found at any time. This particulate isoenzyme was identical with one of the soluble isoenzymes. A number of methods indicated that the soluble isoenzymes were not simply removed from the particulate fraction and that true isoenzymes were found.

  16. Intracellular sucrose communicates metabolic demand to sucrose transporters in developing pea cotyledons.

    Science.gov (United States)

    Zhou, Yuchan; Chan, Katie; Wang, Trevor L; Hedley, Cliff L; Offler, Christina E; Patrick, John W

    2009-01-01

    Mechanistic inter-relationships in sinks between sucrose compartmentation/metabolism and phloem unloading/translocation are poorly understood. Developing grain legume seeds provide tractable experimental systems to explore this question. Metabolic demand by cotyledons is communicated to phloem unloading and ultimately import by sucrose withdrawal from the seed apoplasmic space via a turgor-homeostat mechanism. What is unknown is how metabolic demand is communicated to cotyledon sucrose transporters responsible for withdrawing sucrose from the apoplasmic space. This question was explored here using a pea rugosus mutant (rrRbRb) compromised in starch biosynthesis compared with its wild-type counterpart (RRRbRb). Sucrose influx into cotyledons was found to account for 90% of developmental variations in their absolute growth and hence starch biosynthetic rates. Furthermore, rr and RR cotyledons shared identical response surfaces, indicating that control of transporter activity was likely to be similar for both lines. In this context, sucrose influx was correlated positively with expression of a sucrose/H(+) symporter (PsSUT1) and negatively with two sucrose facilitators (PsSUF1 and PsSUF4). Sucrose influx exhibited a negative curvilinear relationship with cotyledon concentrations of sucrose and hexoses. In contrast, the impact of intracellular sugars on transporter expression was transporter dependent, with expression of PsSUT1 inhibited, PsSUF1 unaffected, and PsSUF4 enhanced by sugars. Sugar supply to, and sugar concentrations of, RR cotyledons were manipulated using in vitro pod and cotyledon culture. Collectively the results obtained showed that intracellular sucrose was the physiologically active sugar signal that communicated metabolic demand to sucrose influx and this transport function was primarily determined by PsSUT1 regulated at the transcriptional level.

  17. In vitro organogenesis in watermelon cotyledons Organogênese in vitro em cotilédones de melancia

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    Maria Graziela Zagatto Krug

    2005-09-01

    Full Text Available The objective of this work was to study the in vitro organogenesis of Citrullus lanatus, by the induction of adventitious buds in cotyledon segments cultured in medium supplemented with cytokinin. Explants were collected from one, three and five-day-old in vitro germinated seedlings, considering the distal and proximal cotyledon regions. The data obtained showed that in vitro organogenesis of watermelon occurred with higher efficiency, when cotyledon segments from the proximal region collected from three-day-old seedlings were cultivated in medium MS, supplemented with BAP (1 mg L-1 and coconut water (10%. The histological study showed that the organogenesis occurs directly, without callus formation, on epidermal and subepidermal layers of the explants. Adventitious shoots were characterized by the development of shoot apical meristem and leaf primordia. The formation of protuberances, that do not develop into adventitious buds, was also observed.O objetivo do trabalho foi estudar a organogênese in vitro de C. lanatus, pela indução de gemas adventícias, em segmentos de cotilédones, cultivados em meio de cultura suplementado com citocinina. Os explantes consistiram de segmentos das regiões distal e proximal de cotilédones, coletados de plantas germinadas in vitro com um, três e cinco dias de idade. Os dados obtidos mostram que a organogênese de melancia, in vitro, ocorre com maior eficiência em segmentos da região proximal dos cotilédones, coletados de plântulas com três dias de idade e cultivados em meio de cultura MS, suplementado com a combinação BAP (1 mg L-1 e água de coco (10%. Pelo estudo histológico, verificou-se que a organogênese ocorre diretamente, sem a formação de calo, na epiderme e subepiderme do explante. As gemas adventícias foram caracterizadas pela presença de meristema apical e primórdios foliares. Observou-se, também, o desenvolvimento de protuberâncias que não se desenvolvem em gemas adventícias.

  18. Effect of kinetin and chloramphenicol on chlorophyll synthesis and chloroplast development in detached lupin cotyledons under low light intensity

    Directory of Open Access Journals (Sweden)

    Fortunat Młodzianowski

    2015-01-01

    Full Text Available Chlorophyll synthesis in detached lupin cotyledons under low light intensity was stimulated by kinetin at 20 mg/l and inhibited by chloramphenicol at 50 mg/1. Kinetin not only conteracted the inhibitory effect of chloramphenicol, but stimulated1 the chlorophyll syntesis to a greater level than in the control material. Kinetin accelerated the starch degradation and the development of chloroplast; its prolonged, action, however, produced some abnormalities, such as an excessive growth of plastids resulting in some cases in bursting of their envelopes, the formation and release f r om plastids of numerous membrane - bound bodies and the accumulation in released and swollen thylakoids of electron - dense substance. In the presence of chloramphenicol, some disturbances in structure of the stroma thylakoids and the appearance of vesicular structures in the stroma and the enlargement of grana and swelling of their thylakoids were observed. Kinetin prevented some of these abnormalities.

  19. The Control of Storage Xyloglucan Mobilization in Cotyledons of Hymenaea courbaril1

    Science.gov (United States)

    dos Santos, Henrique Pessoa; Purgatto, Eduardo; Mercier, Helenice; Buckeridge, Marcos Silveira

    2004-01-01

    Hymenaea courbaril is a leguminous tree species from the neotropical rain forests. Its cotyledons are largely enriched with a storage cell wall polysaccharide (xyloglucan). Studies of cell wall storage polymers have been focused mostly on the mechanisms of their disassembly, whereas the control of their mobilization and the relationship between their metabolism and seedling development is not well understood. Here, we show that xyloglucan mobilization is strictly controlled by the development of first leaves of the seedling, with the start of its degradation occurring after the beginning of eophyll (first leaves) expansion. During the period of storage mobilization, an increase in the levels of xyloglucan hydrolases, starch, and free sugars were observed in the cotyledons. Xyloglucan mobilization was inhibited by shoot excision, darkness, and by treatment with the auxin-transport inhibitor N-1-naphthylphthalamic acid. Analyses of endogenous indole-3-acetic acid in the cotyledons revealed that its increase in concentration is followed by the rise in xyloglucan hydrolase activities, indicating that auxin is directly related to xyloglucan mobilization. Cotyledons detached during xyloglucan mobilization and treated with 2,4-dichlorophenoxyacetic acid showed a similar mobilization rate as in attached cotyledons. This hormonal control is probably essential for the ecophysiological performance of this species in their natural environment since it is the main factor responsible for promoting synchronism between shoot growth and reserve degradation. This is likely to increase the efficiency of carbon reserves utilization by the growing seedling in the understorey light conditions of the rain forest. PMID:15133152

  20. Influence of Endogenous Cytokinins on Reverse Mobilization in Cotyledons of Cicer arietinum L

    Science.gov (United States)

    Muñoz, Jose Luis; Martin, Luisa; Nicolas, Gregorio; Villalobos, Nieves

    1990-01-01

    The embryonic axis plays an essential role in the mobilization of the main reserves of the cotyledons of seeds of Cicer arietinum L. cv Castellana. This control by the axis of the metabolism of the storage products of the cotyledons largely takes place through the cytokinins, which are transported from the embryonic axis to the cotyledons where the mobilization of reserves begins. The principal regulatory role of the endogenous cytokinins concerns the metabolism of carbohydrates and proteins; there is less influence on lipid metabolism. However, each cytokinin seems to have a different role in the mobilization processes. The glucosides, glucosyl zeatin riboside, and glucosyl zeatin act only as storage forms of the hormones. Zeatin riboside affects mainly the mobilization of carbohydrates and has less effect on protein mobilization. Zeatin regulates both the mobilization of carbohydrates and that of proteins and is more marked in the latter case. PMID:16667549

  1. Differential molecular responses of rapeseed cotyledons to light and dark reveal metabolic adaptations towards autotrophy establishment

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    Dongli He

    2016-07-01

    Full Text Available Photosynthesis competent autotrophy should be established during the postgerminative stage of plant growth. Among the multiple factors, light plays a decisive role in the switch from heterotrophic to autotrophic growth. Under dark condition, the rapeseed hypocotyl extends quickly with an apical hook, and the cotyledon is yellow and folded, and maintains high level of the isocitrate lyase (ICL. By contrast, in the light, the hypocotyl extends slowly, the cotyledon unfolds and turns green, the ICL content changes in parallel with the cotyledon greening. To reveal metabolic adaptations during the establishment of postgerminative autotrophy in rapeseed, we conducted comparative proteomic and metabolomic analyses of the cotyledons of seedlings grown under light versus dark conditions. Under both conditions, the increase of the protease, fatty acids β-oxidation and glyoxylate-cycle related proteins was accompanied with rapid degradation of the stored proteins and lipids with an accumulation of the amino acids, while light condition partially retarded these conversions. Light significantly induced the expression of chlorophyll-binding and photorespiration related proteins, resulting in an increase of the reducing-sugar. However, the levels of some chlide conversion, Calvin-cycle and photorespiration related proteins also accumulated in dark grown cotyledons, implying that the transition from heterotrophy to autotrophy is programmed in the seed rather than induced by light. Various anti-stress systems, e.g., redox related proteins, salicylic acid, proline and chaperones, were employed to release the oxidative stress, which was mainly derived from lipid oxidation or photorespiration, under both conditions. This study provides a comprehensive understanding of the differential molecular responses of rapeseed cotyledons to light and dark conditions, which will facilitate further study on the complex mechanism underlying the transition from heterotrophy to

  2. Isolation, culture and plantlet regeneration from cotyledon and mesophyll protoplasts of two pickling cucumber (Cucumis sativus L.) genotypes.

    Science.gov (United States)

    Punja, Z K; Tang, F A; Sarmento, G G

    1990-07-01

    Optimal protoplast yields from cotyledons (2.0×10(6) protoplasts/ 0.5 g tissue) and from true leaves (5.0×10(6) protoplasts/g tissue) of two Cucumis sativus genotypes were obtained following a 16 h digestion with, respectively, 1.25% pectinase+0.5% Cellulysin and 0.5 % pectinase+ 1.0% Cellulysin. Enzyme solutions were prepared in modified MS medium containing half-strength major salts, full complement of minor salts and vitamins, 2% sucrose and 0.25 M mannitol. A plating density of 3.5-4.0× 10(4) protoplasts/ml or higher was required for sustained division, with first division occurring in 6-7 days, second-third division in 8-9 days, and minicalli formation by day 13. Embedding in 0.4% agarose provided the highest plating efficiency (proportion that formed minicalli) of mesophyll protoplasts, which was 28.3% for genotype 3672 and 15% for genotype 3676. By comparison, liquid culture and droplet culture gave lower plating efficiencies (10-19%). Cotyledon and mesophyll protoplasts of one genotype formed minicalli on MS medium containing 2,4-D/BA at 1.0/2.5 μM and 5.0/5.0 μM, respectively, within 21 days, while mesophyll protoplasts of the second genotype formed minicalli on MS medium containing NAA/BA at 5.0/5.0 μM within 12 days. Shoot buds or somatic embryos were obtained upon subculture of calli to MS medium containing lower concentrations (0.05-0.01 μM) of 2,4-D/BA or NAA/BA and a few plantlets, ca.18, were recovered on hormone-free medium.

  3. Insights from ANA-grade angiosperms into the early evolution of CUP-SHAPED COTYLEDON genes.

    Science.gov (United States)

    Vialette-Guiraud, Aurélie C M; Adam, Hélène; Finet, Cédric; Jasinski, Sophie; Jouannic, Stefan; Scutt, Charles P

    2011-06-01

    The closely related NAC family genes NO APICAL MERISTEM (NAM) and CUP-SHAPED COTYLEDON3 (CUC3) regulate the formation of boundaries within and between plant organs. NAM is post-transcriptionally regulated by miR164, whereas CUC3 is not. To gain insight into the evolution of NAM and CUC3 in the angiosperms, we analysed orthologous genes in early-diverging ANA-grade angiosperms and gymnosperms. We obtained NAM- and CUC3-like sequences from diverse angiosperms and gymnosperms by a combination of reverse transcriptase PCR, cDNA library screening and database searching, and then investigated their phylogenetic relationships by performing maximum-likelihood reconstructions. We also studied the spatial expression patterns of NAM, CUC3 and MIR164 orthologues in female reproductive tissues of Amborella trichopoda, the probable sister to all other flowering plants. Separate NAM and CUC3 orthologues were found in early-diverging angiosperms, but not in gymnosperms, which contained putative orthologues of the entire NAM + CUC3 clade that possessed sites of regulation by miR164. Multiple paralogues of NAM or CUC3 genes were noted in certain taxa, including Brassicaceae. Expression of NAM, CUC3 and MIR164 orthologues from Am. trichopoda was found to co-localize in ovules at the developmental boundary between the chalaza and nucellus. The NAM and CUC3 lineages were generated by duplication, and CUC3 was subsequently lost regulation by miR164, prior to the last common ancestor of the extant angiosperms. However, the paralogous NAM clade genes CUC1 and CUC2 were generated by a more recent duplication, near the base of Brassicaceae. The function of NAM and CUC3 in defining a developmental boundary in the ovule appears to have been conserved since the last common ancestor of the flowering plants, as does the post-transcriptional regulation in ovule tissues of NAM by miR164.

  4. Truncation of LEAFY COTYLEDON1 protein is required for asexual reproduction in Kalanchoë daigremontiana.

    Science.gov (United States)

    Garcês, Helena M P; Koenig, Daniel; Townsley, Brad T; Kim, Minsung; Sinha, Neelima R

    2014-05-01

    Kalanchoë daigremontiana reproduces asexually by generating numerous plantlets on its leaf margins. The formation of plantlets requires the somatic initiation of organogenic and embryogenic developmental programs in the leaves. However, unlike normal embryogenesis in seeds, leaf somatic embryogenesis bypasses seed dormancy to form viable plantlets. In Arabidopsis (Arabidopsis thaliana), seed dormancy and embryogenesis are initiated by the transcription factor LEAFY COTYLEDON1 (LEC1). The K. daigremontiana ortholog of LEC1 is expressed during leaf somatic embryo development. However, KdLEC1 encodes for a LEC1-type protein that has a unique B domain, with 11 unique amino acids and a premature stop codon. Moreover, the truncated KdLEC1 protein is not functional in Arabidopsis. Here, we show that K. daigremontiana transgenic plants expressing a functional, chimeric KdLEC1 gene under the control of Arabidopsis LEC1 promoter caused several developmental defects to leaf somatic embryos, including seed dormancy characteristics. The dormant plantlets also behaved as typical dormant seeds. Transgenic plantlets accumulated oil bodies and responded to the abscisic acid biosynthesis inhibitor fluridone, which broke somatic-embryo dormancy and promoted their normal development. Our results indicate that having a mutated form of LEC1 gene in K. daigremontiana is essential to bypass dormancy in the leaf embryos and generate viable plantlets, suggesting that the loss of a functional LEC1 promotes viviparous leaf somatic embryos and thus enhances vegetative propagation in K. daigremontiana. Mutations resulting in truncated LEC1 proteins may have been of a selective advantage in creating somatic propagules, because such mutations occurred independently in several Kalanchoë species, which form plantlets constitutively.

  5. Plant regeneration from protoplasts of immature Vigna sinensis cotyledons via somatic embryogenesis.

    Science.gov (United States)

    Li, X B; Xu, Z H; Wei, Z M

    1995-12-01

    Protoplasts were isolated from immature cotyledons of Vigna sinensis and cultured in a modified MS Liquid medium containing 0. 2 mg/l 2, 4-dichlorophenoxyacetic acid (2, 4-D), 1 mg/l naphthaleneacetic acid (NAA) and 0. 5 mg/l 6-benzylaminopurine (BAP) in the dark at a density of 1 × 10(5)/ml. The protoplasts began to divide in 3-5 days. Sustained cell division resulted in formation of cell clusters and small calli, with the cell division frequency and plating efficiency of cell colonies reaching 27. 7% and 1. 7% respectively. When calli of 2 mm in size were transferred onto MSB medium (MS salts and B5 vitamins) containing 500mg/l NaCl, 500 mg/ 1 casein hydrolysate (CH), 2 mg/l 2,4-D and 0. 5 mg/l BAP for further growth, approximately 5% of the calli developed embryogenically. The embryogenic calli were selected and subcultured on the same composition of MSB medium and were able to maintain somatic embryogenesis capacity in subculture for a long time. When the calli were moved to MSB medium with 0. 1 mg/l indole-3-acetic acid (IAA), 0. 5mg/l kinetin(KT), 3-5% mannitol and 2% sucrose in the light, many somatic embryos formed from the calli. Only part of the embryoids developed further to the cotyledonary stage, and the others died at the globular, heart-shaped or torpedo stages. Finally, some cotyledonary embryoids germinated and developed into plants or shoots. The shoots were readily rooted on 1/2 strength MS medium with 0. 1-0.3 mg/l indole-3-butyric acid (IBA). The plants grew well in soil and were fertile.

  6. The cotyledon cell wall of the common bean (phaseolus vulgaris) resists digestion in the upper intestine and thus may limit iron bioavailability

    Science.gov (United States)

    Strategies that enhance the Fe bioavailability from the bean are of keen interest to nutritionists, bean breeders and growers. In beans, the cotyledon contains 75-80% of the total seed Fe, most of which appears to be located within the cotyledon cell. The cotyledon cell wall is known to be resistan...

  7. DNA endoreplication level in endosperm and in cotyledons during seed development in three dicotyledonous species

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    Kazimierz Marciniak

    2014-01-01

    Full Text Available The DNA content of nuclear and cellular endosperm and in cotyledons in the course of seed development in Helianthus annuus, Pisum sativum and Vicia faba was cytophotometrically measured after Faulgen's reaction. Helianthus annuus is characterized by the lowest endoreplication dynamics attaining a maximum DNA content of 48C in nuclear endosperm, which corresponds to four endoreplication rounds, and 16C DNA (three rounds in cotyledons. In Pisum sativum cellular endosperm in the studied stages of seed development was absent and the highest DNA content in cotyledons was 512C DNA; this corresponds to eight endoreplication rounds. In Vicia faba, the maximum DNA endoreplication level was 1536C in nuclear endosperm, which corresponds to nine endoreplication rounds; in cotyledons the maximum DNA content was 64C (five rounds. In the course of seed development, differences in the dynamics of DNA endoreplication in throphic tissues of the examined species seem to be similar to differences in the endoreplication level in root and leaf parenchyma, but the DNA endoreplication level is much higher in throphic tissues. Therefore, the endoreplication pattern might be species-specific and genetically conditioned.

  8. Developmental biochemistry of cottonseed embryogenesis and germination. VII. Free amino acid pool composition during cotyledon development

    Energy Technology Data Exchange (ETDEWEB)

    Capdevila, A.M.; Dure, L. III

    1977-01-01

    The composition of the free amino acid pool in embryonic cotton (Gossypium hirsutum) cotyledons is quite distinct from that of endosperm, and that of germinated, greened cotyledons is quite distinct from that of leaves. During germination (including the precocious germination of immature seeds), the pool expands considerably showing a pronounced accumulation of asparagine. The high level of asparagine found in seedling roots and in the cotyledon vascular exudate indicates that this is the major transported amino acid in germination. There is no pool expansion in the presence of abscisic acid. In the presence of actinomycin D, the pool expands, but an enormous accumulation of glutamine takes place. The composition of the pool at any stage is not related to the composition of the isoacceptor transfer RNA pool, nor to the composition of the storage protein. Anaerobiosis leads to an accumulation of aspartate, alanine, and glycine at the expense of asparagine; however, desiccation does not result in an accumulation of proline. Conspicuously high levels of arginine are maintained through embryogenesis and germination. The levels of individual amino acids are presented as nanomol per cotyledon pair and as percent of total pool.

  9. Plant growth regulators induced urease activity in Cucurbita pepo L. cotyledons.

    Science.gov (United States)

    El Shora, Hamed M; Ali, Awatif S

    2016-03-01

    This study is aimed to investigate the activity of urease (EC 3.5.1.5, urea amidohydrolase) that catalyzes the hydrolysis of urea in 5-day-old Cucurbita pepo cotyledons subjected to various concentrations of different growth regulators. The treatment of C. pepo cotyledons with different concentrations (100-600 μmol) of different auxins [indole-3-acetic acid (IAA), indole butyric acid (IBA), indole propionic acid (IPA) and naphthalene acetic acid (NAA)]; or with different concentrations (100-300 μmol) of different cytokinins [kinetin, zeatin and benzyladenine (6-BA)] resulted in a significant increase of urease activity, compared to control. The optimal effects were recorded for each of 500 μmol of IAA and 300 μmol of zeatin treatments. A gradual increase in urease activity was detected in cotyledons treated with various concentrations (0.2-1.0 mM) of 28-homobrassinolide (HBL), in relative to control. A substantial increase in urease activity was observed in cotyledons subjected to different concentrations of triazole (10-60 mg L(-1)), containing either triadimefon (TDM) or hexaconazole (HEX), compared to control. The combination of 300 μmol zeatin with any of protein inhibitors, namely 5-fluorouridine (FUrd), cordycepin and α-amanitin, resulted in the alleviation of their inhibitory effect on the urease activity.

  10. The effect of phosphours and water deficit on phosphatase activity and proline accumulation in seedling cotyledons and roots of oilseed rape as compared to that of excised cotyledons and roots

    Directory of Open Access Journals (Sweden)

    Stanisław Flasiński

    2014-01-01

    Full Text Available Oilseed rape seedlings and excised cotyledons and roots were exposed to phosphorus and osmotic stress (-1 MPa: NaCl or PEG. The stress factors limited the growth of the seedlings and inhibited the growth of the excised roots and cotyledons. The phosphorus content in the cotyledons and roots depended on its level in the media and on the stress factors used. Phosphorus deficiency differentiated total phosphatase activity in seedling cotyledons and increased the activity in the excised cotyledons. In the excised and seedling roots, the lack of phosphorus, its deficiency and stress imposed by the addition of NaCl, caused an increase in total and specific phosphatase activity. Osmotic stress caused proline accumulation in both the seedling and excised cotyledons, but the effect of phosphorus stress was much smaller. Proline increase in seedling roots followed only after the osmotic stress caused by NaCl. The proline content in the excised roots was low. Stress factors lowered the protein content in the seedling and excised cotyledons. In both seedling and excised roots, the lowering of the protein content occurred mainly in response to osmotic stress. Kinetin modified metabolic responses in seedling cotyledons and roots. The use of in vitro culture allowed the elucidation of the tested responses. In excised cotyledons grown under stress conditions, kinetin increased the phosphorus and protein contents and lowered proline accumulation, suggesting that kinetin had the ability to overcome phosphorus and osmotic stress. The excised oilseed rape roots responded only slightly to kinetin (Drozdowska and Rogozińska 1984 and its effect was much smaller.

  11. Ectopic expression of UGT75D1, a glycosyltransferase preferring indole-3-butyric acid, modulates cotyledon development and stress tolerance in seed germination of Arabidopsis thaliana.

    Science.gov (United States)

    Zhang, Gui-Zhi; Jin, Shang-Hui; Jiang, Xiao-Yi; Dong, Rui-Rui; Li, Pan; Li, Yan-Jie; Hou, Bing-Kai

    2016-01-01

    The formation of auxin glucose conjugate is proposed to be one of the molecular modifications controlling auxin homeostasis. However, the involved mechanisms and relevant physiological significances are largely unknown or poorly understood. In this study, Arabidopsis UGT75D1 was at the first time identified to be an indole-3-butyric acid (IBA) preferring glycosyltransferase. Assessment of enzyme activity and IBA conjugates in transgenic plants ectopically expressing UGT75D1 indicated that the UGT75D1 catalytic specificity was maintained in planta. It was found that the expression pattern of UGT75D1 was specific in germinating seeds. Consistently, we found that transgenic seedlings with over-produced UGT75D1 exhibited smaller cotyledons and cotyledon epidermal cells than the wild type. In addition, UGT75D1 was found to be up-regulated under mannitol, salt and ABA treatments and the over-expression lines were tolerant to osmotic and salt stresses during germination, resulting in an increased germination rate. Quantitative RT-PCR analysis revealed that the mRNA levels of ABA INSENSITIVE 3 (ABI3) and ABI5 gene in ABA signaling were substantially down-regulated in the transgenic lines under stress treatments. Interestingly, AUXIN RESPONSE FACTOR 16 (ARF16) gene of transgenic lines was also dramatically down-regulated under the same stress conditions. Since ARF16 functions as an activator of ABI3 transcription, we supposed that UGT75D1 might play a role in stress tolerance during germination through modulating ARF16-ABI3 signaling. Taken together, our work indicated that, serving as the IBA preferring glycosyltransferase but distinct from other auxin glycosyltransferases identified so far, UGT75D1 might be a very important player mediating a crosstalk between cotyledon development and stress tolerance of germination at the early stage of plant growth.

  12. Synthesis and Posttranslational Activation of Sulfhydryl-Endopeptidase in Cotyledons of Germinating Vigna mungo Seeds.

    Science.gov (United States)

    Mitsuhashi, W; Minamikawa, T

    1989-01-01

    A sulfhydryl-endopeptidase was purified as a 33 kilodalton (kD) mass polypeptide from cotyledons of Vigna mungo seedlings. Immunoblot analysis with antiserum made against the purified enzyme showed that the sulfhydryl-endopeptidase was synthesized only in the cotyledons during germination and that the amount of the enzyme increased until 4 days after imbibition and decreased thereafter. Next, an RNA fraction was prepared from cotyledons of 3 day old seedlings and translated in a wheat germ system. The synthesis of a 45 kD polypeptide was shown by the analysis of its translation products by immunoprecipitation with the antiserum to the endopeptidase and gel electrophoresis. When the RNA fraction was translated in the presence of canine microsomal membranes, a smaller polypeptide, having a 43 kD molecular mass, was detected as the translation product. When membrane-bound polysomes, but not free polysomes, prepared from cotyledons were used for translation in the wheat germ system, both the 43 and 45 kD polypeptides were synthesized. By incubation of a crude enzyme extract from cotyledons at 5 +/- 1 degrees C at neutral pH, the 43 kD polypeptide was sequentially cleaved to the 33 kD polypeptide via 39 and 36 kD intermediate polypeptides. The endopeptidase was activated simultaneously with the processing. Two-dimensional polyacrylamide gel electrophoresis showed that the 33 kD polypeptide was the fully activated form of the enzyme, whereas little or no activity was detected in other forms. From the present results, we postulate that the sulfhydryl-endopeptidase is first synthesized as the 45 kD precursor with a 2 kD signal peptide being cleaved, and that the 43 kD polypeptide is further cleaved to give the 33kD mature enzyme.

  13. Synthesis and Posttranslational Activation of Sulfhydryl-Endopeptidase in Cotyledons of Germinating Vigna mungo Seeds 1

    Science.gov (United States)

    Mitsuhashi, Wataru; Minamikawa, Takao

    1989-01-01

    A sulfhydryl-endopeptidase was purified as a 33 kilodalton (kD) mass polypeptide from cotyledons of Vigna mungo seedlings. Immunoblot analysis with antiserum made against the purified enzyme showed that the sulfhydryl-endopeptidase was synthesized only in the cotyledons during germination and that the amount of the enzyme increased until 4 days after imbibition and decreased thereafter. Next, an RNA fraction was prepared from cotyledons of 3 day old seedlings and translated in a wheat germ system. The synthesis of a 45 kD polypeptide was shown by the analysis of its translation products by immunoprecipitation with the antiserum to the endopeptidase and gel electrophoresis. When the RNA fraction was translated in the presence of canine microsomal membranes, a smaller polypeptide, having a 43 kD molecular mass, was detected as the translation product. When membrane-bound polysomes, but not free polysomes, prepared from cotyledons were used for translation in the wheat germ system, both the 43 and 45 kD polypeptides were synthesized. By incubation of a crude enzyme extract from cotyledons at 5 ± 1°C at neutral pH, the 43 kD polypeptide was sequentially cleaved to the 33 kD polypeptide via 39 and 36 kD intermediate polypeptides. The endopeptidase was activated simultaneously with the processing. Two-dimensional polyacrylamide gel electrophoresis showed that the 33 kD polypeptide was the fully activated form of the enzyme, whereas little or no activity was detected in other forms. From the present results, we postulate that the sulfhydryl-endopeptidase is first synthesized as the 45 kD precursor with a 2 kD signal peptide being cleaved, and that the 43 kD polypeptide is further cleaved to give the 33kD mature enzyme. Images Figure 1 Figure 2 Figure 4 Figure 5 Figure 6 PMID:16666526

  14. Purification, properties and alternate substrate specificities of arginase from two different sources: Vigna catjang cotyledon and buffalo liver

    Directory of Open Access Journals (Sweden)

    2005-08-01

    Full Text Available Arginase was purified from Vigna catjang cotyledons and buffalo liver by chromatographic separations using Bio-Gel P-150, DEAE-cellulose and arginine AH Sepharose 4B affinity columns. The native molecular weight of an enzyme estimated on Bio-Gel P-300 column for Vigna catjang was 210 kDa and 120 kDa of buffalo liver, while SDS-PAGE showed a single band of molecular weight 52 kDa for cotyledon and 43 kDa for buffalo liver arginase. The kinetic properties determined for the purified cotyledon and liver arginase showed an optimum pH of 10.0 and pH 9.2 respectively. Optimal cofactor Mn++ ion concentration was found to be 0.6 mM for cotyledon and 2 mM for liver arginase. The Michaelis-Menten constant for cotyledon arginase and hepatic arginase were found to be 42 mM and 2 mM respectively. The activity of guanidino compounds as alternate substrates for Vigna catjang cotyledon and buffalo liver arginase is critically dependent on the length of the amino acid side chain and the number of carbon atoms. In addition to L-arginine cotyledon arginase showed substrate specificity towards agmatine and L-canavanine, whereas the liver arginase showed substrate specificity towards only L-canavanine.

  15. Towards the resolution of a long-standing evolutionary question: muscle identity and attachments are mainly related to topological position and not to primordium or homeotic identity of digits.

    Science.gov (United States)

    Diogo, Rui; Walsh, Sean; Smith, Christopher; Ziermann, Janine M; Abdala, Virginia

    2015-06-01

    Signaling for limb bone development usually precedes that for muscle development, such that cartilage is generally present before muscle formation. It remains obscure, however, if: (i) tetrapods share a general, predictable spatial correlation between bones and muscles; and, if that is the case, if (ii) such a correlation would reflect an obligatory association between the signaling involved in skeletal and muscle morphogenesis. We address these issues here by using the results of a multidisciplinary analysis of the appendicular muscles of all major tetrapod groups integrating dissections, muscle antibody stainings, regenerative and ontogenetic analyses of fluorescently-labeled (GFP) animals, and studies of non-pentadactyl human limbs related to birth defects. Our synthesis suggests that there is a consistent, surprising anatomical pattern in both normal and abnormal phenotypes, in which the identity and attachments of distal limb muscles are mainly related to the topological position, and not to the developmental primordium (anlage) or even the homeotic identity, of the digits to which they are attached. This synthesis is therefore a starting point towards the resolution of a centuries-old question raised by authors such as Owen about the specific associations between limb bones and muscles. This question has crucial implications for evolutionary and developmental biology, and for human medicine because non-pentadactyly is the most common birth defect in human limbs. In particular, this synthesis paves the way for future developmental experimental and mechanistic studies, which are needed to clarify the processes that may be involved in the elaboration of the anatomical patterns described here, and to specifically test the hypothesis that distal limb muscle identity/attachment is mainly related to digit topology.

  16. Involvement of gibberellins in expression of a cysteine proteinase (SH-EP) in cotyledons of Vigna mungo seedlings.

    Science.gov (United States)

    Taneyama, M; Okamoto, T; Yamane, H; Minamikawa, T

    2001-11-01

    The expression of a papain-type proteinase, designated SH-EP, in cotyledons of Vigna mungo seedlings has been shown to require some factors in the embryonic axes. Gibberellin A1 (GA(1)) and GA(20) were identified by GC-MS in embryonic axes of V. mungo seedlings. The level of accumulation of SH-EP in cotyledons of V. mungo seedlings was greatly reduced by treatment of the seeds with uniconazole-P, an inhibitor for GA biosynthesis. The reduced level of accumulation of SH-EP in cotyledons by uniconazole-P was recovered by exogenous application of GA(1) and GA(20) to the seedlings.

  17. Effect of cotyledons and epicotyl upon the activity of endogenous gibberellins in roots of flax (Linum usitatissimum L. seedlings

    Directory of Open Access Journals (Sweden)

    Krystyna M. Janas

    2013-12-01

    Full Text Available In 11-day-old flax seedlings, the level of endogenous gibberellins in roots decreased within 12 hours after the excision of cotyledons and the epicotyl; however, 24 to 48 hours after excision the gibberellin level increased again. The decrease in the gibberellin level within the first 12 hours after excision suggests a participation of the cotyledons and the epicotyl in the biosynthesis of endogenous gibberellins.

  18. Effect of cotyledons and epicotyl upon the activity of endogenous gibberellins in roots of flax (Linum usitatissimum L.) seedlings

    OpenAIRE

    2013-01-01

    In 11-day-old flax seedlings, the level of endogenous gibberellins in roots decreased within 12 hours after the excision of cotyledons and the epicotyl; however, 24 to 48 hours after excision the gibberellin level increased again. The decrease in the gibberellin level within the first 12 hours after excision suggests a participation of the cotyledons and the epicotyl in the biosynthesis of endogenous gibberellins.

  19. Flour from Prosopis alba cotyledons: A natural source of nutrient and bioactive phytochemicals.

    Science.gov (United States)

    Cattaneo, F; Costamagna, M S; Zampini, I C; Sayago, J; Alberto, M R; Chamorro, V; Pazos, A; Thomas-Valdés, S; Schmeda-Hirschmann, G; Isla, M I

    2016-10-01

    The Prosopis alba seed is a waste material in the process to produce pod flour. To suggest a potential use of these seeds it is necessary to determine the nutritional, phytochemical and functional quality of cotyledon flour from Prosopis alba. This flour showed high level of proteins (62%), low content of total carbohydrate and fat. Free polyphenol (1150±20mg GAE/100g flour) and carotenoids (10.55±0.05mg β-CE/100g flour) compounds were the dominant compounds. The main identified constituents in the polyphenolic extracts were C- glycosyl flavones, including schaftoside, isoschaftoside, vicenin II, vitexin and isovitexin. The extract enriched in polyphenolic compounds exhibited ABTS(+) reducing capacity and scavenging activity of H2O2; and was able to inhibit phospholipase, lipoxygenase and cyclooxygenase, three pro-inflammatory enzymes. According to our results, the P. alba cotyledon flour could be considered as a new alternative in the formulation of functional foods or food supplements.

  20. Efficient plant regeneration from cotyledon explants of bottle gourd (Lagenaria siceraria Standl.).

    Science.gov (United States)

    Han, J-S; Oh, D-G; Mok, I-G; Park, H-G; Kim, C K

    2004-11-01

    Using cotyledon explants excised from seedlings germinated in vitro, an efficient plant regeneration system via organogenesis was established for bottle gourd (Lagenaria siceraria Standl.). Maximum shoot regeneration was obtained when the proximal parts of cotyledons from 4-day-old seedlings were cultured on MS medium with 3 mg/l BA and 0.5 mg/l AgNO(3) under a 16-h photoperiod. After 3-4 weeks of culture, 21.9-80.7% of explants from the five cultivars regenerated shoots. Adventitious shoots were successfully rooted on a half-strength MS medium with 0.1 mg/l IAA for 2-3 weeks. Flow cytometric analysis revealed that most of the regenerated plants derived from culture on medium with AgNO(3) were diploid.

  1. Calcium Distribution in Globoid Crystals of Cucurbita Cotyledon Protein Bodies 1

    Science.gov (United States)

    Lott, John N. A.; Spitzer, Ernest; Vollmer, Catherine M.

    1979-01-01

    Energy-dispersive x-ray analysis was used to investigate the location of globoid crystals with relatively high Ca levels within cotyledons of Cucurbita maxima, Cucurbita mixta, and Cucurbita andreana. The small globoid crystals in both upper and lower epidermal cells commonly contained Ca. Ca was present in globoid crystals of all provascular regions with the exception of the very small provascular regions of C. maxima. In C. maxima and C. mixta cotyledons, some cases were observed where Ca was found in the globoid crystals of the first layer of mesophyll cells surrounding the provascular region, but in general Ca was absent from globoid crystals of palisade and spongy mesophyll cells. In C. andreana, globoid crystals of palisade and spongy mesophyll cells commonly contained at least some Ca. Cell position and cell type are factors affecting the Ca content of globoid crystals in protein bodies. PMID:16660825

  2. Somatic embryogenesis in immature cotyledons of Manchurian ash (Fraxinus mandshurica Rupr.)

    Science.gov (United States)

    Somatic embryogenesis was obtained from immature cotyledon explants that were cultured on half-strength Murashige and Skoog (MS) salts and vitamins with 5.4 uM naphthaleneacetic acid (NAA) and 0.2 uM thidiazuron (TDZ) plus a 4x4 factorial combination of 0,9.8, 34.6, or 49.2 uM indole-3-butyric acid ...

  3. Optimizing of a Horizontal Cylinder Type Cocoa Roaster for Dried Cocoa Cotyledon Roasting

    Directory of Open Access Journals (Sweden)

    Sukrisno Widyotomo

    2006-08-01

    Full Text Available The secondary process of cocoa is one of the promising alternatives to increase the value added of dried cocoa beans. One the other hand, the development for secondary cocoa process requires an appropriate technology that is not available yet for small or medium scale business. Cocoa roaster is a basic equipment to produce good and competitive secondary cocoa products for chocolate industry. The Indonesian Coffee and Cocoa Research Institute has, therefore, designed and tested a horizontal cylinder type roaster for drying cocoa cotyledon. The cylinder has 405 mm diameter, 520 mm long and is rotated by a 1 HP (0.75 kW, 220 V, single phase and 1400 rpm electric motor. Assisted with a gear reducer, the final cylinder rotation is adjusted at approximately 6 rpm. The heat for roasting process is generated from kerosene burner. At the end of roasting, the roasted beans are cooled down by ambient air inside a cooling platform by natural air flow. The raw material used in this optimizing test was dried fine cocoa cotyledon. Field tests showed that the optimum performance of the roaster was 7 kg dried fine cocoa cotyledon loaded with roasting temperature 120 oC and 25.57 kg/h optimum capacity. The organoleptic test showed that score of aromatic, flavour, acidity, bitterness, astringency and burnt were 4.8, 5.2, 5.4, 5.2, 4.8 and 0.8 with 10 scale, also 4.2 with 5 scale for likely. The roasting time was 15—25 minutes to get 2.5—3% final water content depend on roasting temperature and cocoa cotyledon loaded. Key words: cocoa, roasting, horizontal cylinder, quality.

  4. Nitrogen and phosphorus compounds in the aleurone grains of Iris pseudoacorus endosperm and Pisum sativum cotyledons

    OpenAIRE

    Ligia Konopska

    2015-01-01

    Aleurone grains from Iris pseudoacorus endosperm and Pisum sativum cotyledons were isolated partly according to Tombs's method (1967). Nitrogen compounds content was determined in them by Kjeldahl's micromethod, and in the particular fractions after Thiman and Laloraya (1960). Mainly protein N was detected in the aleurone grains, constituting 14.8 and 15.2 per cent of the dry mass of pea and Iris seeds, respectively. Moreover, phosphorus compounds were fractionated according to Holden and Pir...

  5. Influence of pericarp, cotyledon and inhibitory substances on sharp tooth oak (Quercus aliena var. acuteserrata germination.

    Directory of Open Access Journals (Sweden)

    Yan Liu

    Full Text Available In order to explore the mechanism of delayed and uneven germination in sharp tooth oak (Quercus aliena var. acuteserrata (STO, mechanical scarification techniques were used to study STO root and shoot germination and growth. The techniques used were: removing cup scar (RS, removing the pericarp (RP, and cutting off 1/2 (HC and 2/3 (TC cotyledons. Germination percentage and root and shoot length for Chinese cabbage (Beassica pekinensis seeds (CCS were also investigated for CCS cultivated in a Sanyo growth cabinet watered by distilled water and 80% methanol extracts from the acorn embryo, cotyledon and pericarp with concentrations of 1.0 g, 0.8 g, 0.6 g and 0.4 g dry acorn weight per ml methanol. The results showed that the majority of roots and shoots from acorns with RP and HC treatment emerged two weeks earlier, more simultaneously, and their total emergencies were more than 46% and 28% higher, respectively. TC accelerated root and shoot emergence time and root length, but root and shoot germination rate and shoot height had no significant difference from the control. Positive consequences were not observed on all indices of RS treatment. The germination rates of CCS watered by 1.0 g · ml(-1 methanol extracts from the embryo and cotyledon were significantly lower than those from the pericarp, and all concentrations resulted in decreased growth of root and shoot. Methanol extracts from pericarp significantly reduced root length of CCS, but presented little response in germination percentage and shoot length. The inhibitory effect was gradually increased with the increasing concentration of the methanol extract. We conclude that both the mechanical restriction of the pericarp and the presence of germination inhibitors in the embryo, cotyledon and pericarp are the causes for delayed and asynchronous germination of STO acorns.

  6. Separation and Characterization of Two Endopeptidases from Cotyledons of Germinating Vigna mungo Seeds.

    Science.gov (United States)

    Mitsuhashi, W; Koshiba, T; Minamikawa, T

    1986-03-01

    Two major endopeptidases were present in cotyledons of germinating Vigna mungo seeds, as detected by the zymogram after polyacrylamide gel electrophoresis. They were not detectable in cotyledons of dry seeds, but their intensities on the zymogram increased during germination. During incubation of detached cotyledons, however, the activities showed only a slight increase for 5 days. These two endopeptidases could be separated by Sephacryl S-200 column chromatography. One of them was found to be a serine-endopeptidase as judged by phenylmethylsulfonylfluoride and diisopropyl fluorophosphate inhibition. The other was a sulfhydryl-endopeptidase because of its dependency on 2-mercaptoethanol and inhibition by leupeptin, chymostatin, and antipain. Analysis by sodium dodecyl sulfate polyacrylamide gel electrophoresis indicatd that the two endopeptidases digested the Vigna mungo seed globulin subunits at different rates. The serine enzyme digested the 56 kilodalton subunit at first, but the sulfhydryl enzyme digested the 54 kilodalton peptide more efficiently than the 56 kilodalton peptide. The pattern of digestion of globulin by the combination of the serine- and sulfhydryl-endopeptidases was similar to that using crude enzyme extracts.

  7. Separation and Characterization of Two Endopeptidases from Cotyledons of Germinating Vigna mungo Seeds 1

    Science.gov (United States)

    Mitsuhashi, Wataru; Koshiba, Tomokazu; Minamikawa, Takao

    1986-01-01

    Two major endopeptidases were present in cotyledons of germinating Vigna mungo seeds, as detected by the zymogram after polyacrylamide gel electrophoresis. They were not detectable in cotyledons of dry seeds, but their intensities on the zymogram increased during germination. During incubation of detached cotyledons, however, the activities showed only a slight increase for 5 days. These two endopeptidases could be separated by Sephacryl S-200 column chromatography. One of them was found to be a serine-endopeptidase as judged by phenylmethylsulfonylfluoride and diisopropyl fluorophosphate inhibition. The other was a sulfhydryl-endopeptidase because of its dependency on 2-mercaptoethanol and inhibition by leupeptin, chymostatin, and antipain. Analysis by sodium dodecyl sulfate polyacrylamide gel electrophoresis indicatd that the two endopeptidases digested the Vigna mungo seed globulin subunits at different rates. The serine enzyme digested the 56 kilodalton subunit at first, but the sulfhydryl enzyme digested the 54 kilodalton peptide more efficiently than the 56 kilodalton peptide. The pattern of digestion of globulin by the combination of the serine- and sulfhydryl-endopeptidases was similar to that using crude enzyme extracts. Images Fig. 2 Fig. 3 Fig. 6 Fig. 7 PMID:16664675

  8. The Cytoskeleton and the Peroxisomal-Targeted SNOWY COTYLEDON3 Protein Are Required for Chloroplast Development in Arabidopsis[W

    Science.gov (United States)

    Albrecht, Verónica; Šimková, Klára; Carrie, Chris; Delannoy, Etienne; Giraud, Estelle; Whelan, Jim; Small, Ian David; Apel, Klaus; Badger, Murray R.; Pogson, Barry James

    2010-01-01

    Here, we describe the snowy cotyledon3 (sco3-1) mutation, which impairs chloroplast and etioplast development in Arabidopsis thaliana seedlings. SCO3 is a member of a largely uncharacterized protein family unique to the plant kingdom. The sco3-1 mutation alters chloroplast morphology and development, reduces chlorophyll accumulation, impairs thylakoid formation and photosynthesis in seedlings, and results in photoinhibition under extreme CO2 concentrations in mature leaves. There are no readily apparent changes to chloroplast biology, such as transcription or assembly that explain the disruption to chloroplast biogenesis. Indeed, SCO3 is actually targeted to another organelle, specifically to the periphery of peroxisomes. However, impaired chloroplast development cannot be attributed to perturbed peroxisomal metabolic processes involving germination, fatty acid β-oxidation or photorespiration, though there are so far undescribed changes in low and high CO2 sensitivity in seedlings and young true leaves. Many of the chloroplasts are bilobed, and some have persistent membranous extensions that encircle other cellular components. Significantly, there are changes to the cytoskeleton in sco3-1, and microtubule inhibitors have similar effects on chloroplast biogenesis as sco3-1 does. The localization of SCO3 to the periphery of the peroxisomes was shown to be dependent on a functional microtubule cytoskeleton. Therefore, the microtubule and peroxisome-associated SCO3 protein is required for chloroplast development, and sco3-1, along with microtubule inhibitors, demonstrates an unexpected role for the cytoskeleton and peroxisomes in chloroplast biogenesis. PMID:20978221

  9. The CUP-SHAPED COTYLEDON2 and 3 genes have a post-meristematic effect on Arabidopsis thaliana phyllotaxis

    KAUST Repository

    Burian, Agata

    2015-02-12

    Background and Aims: The arrangement of flowers in inflorescence shoots of Arabidopsis thaliana represents a regular spiral Fibonacci phyllotaxis. However, in the cuc2 cuc3 double mutant, flower pedicels are fused to the inflorescence stem, and phyllotaxis is aberrant in the mature shoot regions. This study examined the causes of this altered development, and in particular whether the mutant phenotype is a consequence of defects at the shoot apex, or whether post-meristematic events are involved. Methods: The distribution of flower pedicels and vascular traces was examined in cross-sections of mature shoots; sequential replicas were used to investigate the phyllotaxis and geometry of shoot apices, and growth of the young stem surface. The expression pattern of CUC3 was analysed by examining its promoter activity. Key Results: Phyllotaxis irregularity in the cuc2 cuc3 double mutant arises during the post-meristematic phase of shoot development. In particular, growth and cell divisions in nodes of the elongating stem are not restricted in the mutant, resulting in pedicel-stem fusion. On the other hand, phyllotaxis in the mutant shoot apex is nearly as regular as that of the wild type. Vascular phyllotaxis, generated almost simultaneously with the phyllotaxis at the apex, is also much more regular than pedicel phyllotaxis. The most apparent phenotype of the mutant apices is a higher number of contact parastichies. This phenotype is associated with increased meristem size, decreased angular width of primordia and a shorter plastochron. In addition, the appearance of a sharp and deep crease, a characteristic shape of the adaxial primordium boundary, is slightly delayed and reduced in the mutant shoot apices. Conclusions: The cuc2 cuc3 double mutant displays irregular phyllotaxis in the mature shoot but not in the shoot apex, thus showing a post-meristematic effect of the mutations on phyllotaxis. The main cause of this effect is the formation of pedicel-stem fusions

  10. Inducement of Salicylic Acid in Cucumber Cotyledons by Neodymium and Lanthanum

    Institute of Scientific and Technical Information of China (English)

    Zhang Pengying; Chen Kaoshan

    2007-01-01

    The cotyledons of cucumber were used to investigate the effects of Nd3+ and La3+ on physiological characters in respect of plant resistance. The cucumber cotyledons were sprayed with 15 μg·ml-1 Nd3+ and La3+, and the changes on salicylic acid (SA) and SA 2-O-β-glucoside (SAG) contents, the generation of · O-2, and β-1, 3-glucanase and chitinase activities were measured. The results demonstrated that the yields of endogenous SA and SAG in cucumber cotyledons were enhanced significantly in a short time in response to Nd3+ and La3+ treatments. At 3 h after La3+ treatment, the levels of SA and SAG reached the maximum, with 4.3 and 3.3-fold of that in control (CK), respectively. At 12 h after Nd3+ treatment, the contents of SA and SAG reached peak levels, increased by 4.5 and 3.0-fold of that in control (CK), respectively. These two components were kept in a higher level up to 72 h after treatment. The generation rate of · O-2 increased gradually in the treatments of Nd3+ or La3+, and then decreased in cucumber at 12 h. β-1,3-glucanase activity reached peak at 3 h, while chitinase activity reached peak at 12 h, and then both decreased gradually in Nd3+ or La3+ treatments. At 72 h after treatment, activities of β-1, 3-glucanase and chitinase increased by about 30% and 50%, as compared with CK. Therefore, these results suggested that both Nd3+ and La3+ could increase the contents of endogenous SA and its related factors which induce plant resistance through the signal pathway of the salicylic acid.

  11. An effective placental cotyledons proteins extraction method for 2D gel electrophoresis.

    Science.gov (United States)

    Tan, Niu J; Daim, Leona D J; Jamil, Amilia A M; Mohtarrudin, Norhafizah; Thilakavathy, Karuppiah

    2017-03-01

    Effective protein extraction is essential especially in producing a well-resolved proteome on 2D gels. A well-resolved placental cotyledon proteome, with good reproducibility, have allowed researchers to study the proteins underlying the physiology and pathophysiology of pregnancy. The aim of this study is to determine the best protein extraction protocol for the extraction of protein from placental cotyledons tissues for a two-dimensional gel electrophoresis (2D-GE). Based on widely used protein extraction strategies, 12 different extraction methodologies were carefully selected, which included one chemical extraction, two mechanical extraction coupled protein precipitations, and nine chemical extraction coupled protein precipitations. Extracted proteins were resolved in a one-dimensional gel electrophoresis and 2D-GE; then, it was compared with set criteria: extraction efficacy, protein resolution, reproducibility, and recovery efficiency. Our results revealed that a better profile was obtained by chemical extraction in comparison to mechanical extraction. We further compared chemical extraction coupled protein precipitation methodologies, where the DNase/lithium chloride-dense sucrose homogenization coupled dichloromethane-methanol precipitation (DNase/LiCl-DSH-D/MPE) method showed good protein extraction efficiency. This, however, was carried out with the best protein resolution and proteome reproducibility on 2D-gels. DNase/LiCl-DSH-D/MPE was efficient in the extraction of proteins from placental cotyledons tissues. In addition, this methodology could hypothetically allow the protein extraction of any tissue that contains highly abundant lipid and glycogen. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  12. Fatty acid profiling of soybean cotyledons by near-infrared spectroscopy.

    Science.gov (United States)

    Roberts, C A; Ren, C; Beuselinck, P R; Benedict, H R; Bilyeu, K

    2006-11-01

    Genetically improved soybean grain often contains altered fatty acid profiles. Such alterations can have deleterious effects on seed germination and seedling development, making it necessary to monitor fatty acid profiles in follow-up physiological studies. The objective of this research was to quantify the five fatty acids in soybean (Glycine max) cotyledons using near-infrared (NIR) spectroscopy. Soybean cotyledon samples were dried, ground, and scanned with visible and NIR radiation from 400 to 2500 nm, and reflectance was recorded. Samples were also analyzed by gas chromatography (GC) for palmitic, stearic, oleic, linoleic, and linolenic acids and total oil; GC data, expressed as actual concentration and proportion of total oil, were regressed against spectral data to develop calibration equations. Equation statistics indicated that four of the five fatty acids could be predicted accurately by NIR spectroscopy; the fifth fatty acid could be determined by subtraction. Principal component analysis revealed that most of the spectral variation in this population was due to chlorophyll absorbance in the visible region. Therefore, the spectra were trimmed to include the NIR region only (1100-2500 nm), and a second set of equations was developed. Equations based exclusively on NIR spectra had equal or greater precision than equations based on visible and NIR spectra. Principal component analysis and partial least squares analysis revealed that even after trimming, at least 90% of the spectral variation was unrelated to fatty acid, though variation from fatty acid was identified in the second and third principal components. This research provides an NIR method for complete fatty acid profiling of soybean cotyledons. Equations were achieved with NIR spectra only, so spectrophotometers that analyze both the visible and NIR regions are not needed for this analysis. In addition, equations were possible with a 250 mg sample, which is one-tenth the normal sample size for

  13. Bicarbonate blocks iron translocation from cotyledons inducing iron stress responses in Citrus roots.

    Science.gov (United States)

    Martínez-Cuenca, Mary-Rus; Legaz, Francisco; Forner-Giner, M Ángeles; Primo-Millo, Eduardo; Iglesias, Domingo J

    2013-07-01

    The effect of bicarbonate ion (HCO3(-)) on the mobilization of iron (Fe) reserves from cotyledons to roots during early growth of citrus seedlings and its influence on the components of the iron acquisition system were studied. Monoembryonic seeds of Citrus limon (L.) were germinated "in vitro" on two iron-deprived media, supplemented or not with 10mM HCO3(-) (-Fe+Bic and -Fe, respectively). After 21d of culture, Fe concentration in seedling organs was measured, as well as gene expression and enzymatic activities. Finally, the effect of Fe resupply on the above responses was tested in the presence and absence of HCO3(-) (+Fe+Bic or +Fe, respectively). -Fe+Bic seedlings exhibited lower Fe concentration in shoots and roots than -Fe ones but higher in cotyledons, associated to a significative inhibition of NRAMP3 expression. HCO3(-) upregulated Strategy I related genes (FRO1, FRO2, HA1 and IRT1) and FC-R and H(+)-ATPase activities in roots of Fe-starved seedlings. PEPC1 expression and PEPCase activity were also increased. When -Fe+Bic pre-treated seedlings were transferred to Fe-containing media for 15d, Fe content in shoots and roots increased, although to a lower extent in the +Fe+Bic medium. Consequently, the above-described root responses became markedly repressed, however, this effect was less pronounced in +Fe+Bic seedlings. In conclusion, it appears that HCO3(-) prevents Fe translocation from cotyledons to shoot and root, therefore reducing their Fe levels. This triggers Fe-stress responses in the root, enhancing the expression of genes related with Fe uptake and the corresponding enzymatic activities.

  14. Influence of Milling Process of Roasted Cocoa Beans on Size Distribution Change of Cocoa Cotyledon

    Directory of Open Access Journals (Sweden)

    Sukrisno Widyotomo

    2007-05-01

    Full Text Available One of important steps in secondarycocoa process is deshelling cocoa beans roasted. The aim of deshelling is to enrich cotyledon cocoa surface area which affects to reduce energy and processing time with good quality of the chocolate product. The objective of this research is to study the influence of milling process on physical characteristic change of cocoa beans roasted such as size distribution change, geometrical diameter average, uniformity index, fineness modulus, and average dimension of cotyledoncocoa roasted. The Indonesian Coffee and Cocoa Research Institute has designed and tested deshelling of roasted cocoa beans which will be used in this research. Before deshelling process, C grade bulk cocoa beans has been roasted up to 2.5—3% water contents. The result showed that optimal milling process by rotary cutter type milling unit has good size distribution change, geometrical diameter average, uniformity index, fineness modulus, and average dimension on 500 rpm rotary speed and 2.8 m/s air flow. On optimal process condition, 74.5% of cocoa cotyledon roasted has diameter size between 2.0—4.75 mm, 2.116 mm average of geometrical diameter, 0.864 mm average dimension, 3.052 fineness modulus, and 80% as crude size particel-20% as temperate size particel on uniformity index. Therefore, more than 80% of cocoa cotyledon roasted has diameter size between 2.0—4.75 mm with 700—900 rpm rotary cutter speed. Average of geometric diameter was 1.65—2.19 mm, and the dimension average was 0.69—0.89 mm. Uniformity index was crude size particle up to 80—90%, and in temperate size particle10—20%. Fineness modulus value was 2.73—3.09. Key words: cocoa, milling, size distribution, roasted beans.

  15. A green-cotyledon/stay-green mutant exemplifies the ancient whole-genome duplications in soybean.

    Science.gov (United States)

    Nakano, Michiharu; Yamada, Tetsuya; Masuda, Yu; Sato, Yutaka; Kobayashi, Hideki; Ueda, Hiroaki; Morita, Ryouhei; Nishimura, Minoru; Kitamura, Keisuke; Kusaba, Makoto

    2014-10-01

    The recent whole-genome sequencing of soybean (Glycine max) revealed that soybean experienced whole-genome duplications 59 million and 13 million years ago, and it has an octoploid-like genome in spite of its diploid nature. We analyzed a natural green-cotyledon mutant line, Tenshin-daiseitou. The physiological analysis revealed that Tenshin-daiseitou shows a non-functional stay-green phenotype in senescent leaves, which is similar to that of the mutant of Mendel's green-cotyledon gene I, the ortholog of SGR in pea. The identification of gene mutations and genetic segregation analysis suggested that defects in GmSGR1 and GmSGR2 were responsible for the green-cotyledon/stay-green phenotype of Tenshin-daiseitou, which was confirmed by RNA interference (RNAi) transgenic soybean experiments using GmSGR genes. The characterized green-cotyledon double mutant d1d2 was found to have the same mutations, suggesting that GmSGR1 and GmSGR2 are D1 and D2. Among the examined d1d2 strains, the d1d2 strain K144a showed a lower Chl a/b ratio in mature seeds than other strains but not in senescent leaves, suggesting a seed-specific genetic factor of the Chl composition in K144a. Analysis of the soybean genome sequence revealed four genomic regions with microsynteny to the Arabidopsis SGR1 region, which included the GmSGR1 and GmSGR2 regions. The other two regions contained GmSGR3a/GmSGR3b and GmSGR4, respectively, which might be pseudogenes or genes with a function that is unrelated to Chl degradation during seed maturation and leaf senescence. These GmSGR genes were thought to be produced by the two whole-genome duplications, and they provide a good example of such whole-genome duplication events in the evolution of the soybean genome.

  16. Subcellular Compartmentation of the 4-Aminobutyrate Shunt in Protoplasts from Developing Soybean Cotyledons.

    Science.gov (United States)

    Breitkreuz, K. E.; Shelp, B. J.

    1995-05-01

    The subcellular localization of enzymes involved in the 4-ami-nobutyrate shunt was investigated in protoplasts prepared from developing soybean [Glycine max (L.) Merrill cv Maple Arrow] cotyledons. Protoplast lysate was fractionated by differential and continuous Percoll-gradient centrifugation to separate organelle fractions. Glutamate decarboxylase (EC 4.1.1.15) was found exclusively in the cytosol, whereas 4-aminobutyrate:pyruvate transami-nase (EC 2.6.1.19) and succinic semialdehyde dehydrogenase (EC 1.2.1.16) were associated exclusively with the mitochondrial fractions. Mitochondrial fractions also catabolized [U-14C]4-aminobu-tyrate to labeled succinate.

  17. Bacterial expression of an active class Ib chitinase from Castanea sativa cotyledons.

    Science.gov (United States)

    Allona, I; Collada, C; Casado, R; Paz-Ares, J; Aragoncillo, C

    1996-12-01

    Ch3, an endochitinase of 32 kDa present in Castanea sativa cotyledons, showed in vitro antifungal properties when assayed against Trichoderma viride. The characterization of a cDNA clone corresponding to this protein indicated that Ch3 is a class Ib endochitinase that is synthesized as a preprotein with a signal sequence preceding the mature polypeptide. Bacterial expression of mature Ch3 fused to the leader peptide of the periplasmic protein ompT resulted in active Ch3 enzyme. A plate assay was adapted for semi-quantitative determination of chitinase activity secreted from cultured bacteria, which should facilitate the identification of mutants with altered capacity to hydrolyse chitin.

  18. Short communication. Inheritance of cotyledon storage proteins in European sweet chestnut (Castanea sativa Miller)

    Energy Technology Data Exchange (ETDEWEB)

    Martin, M. A.; Alvarez, J. B.; Gutierrez, J. C.; Martin, L. M.

    2012-11-01

    A first approximation to the inheritance of cotyledon storage proteins was studied in European sweet chestnut (Castanea sativa Mill.) by evaluating the offspring of a controlled cross between two local chestnut varieties (Corriente and Pilonga) from southern Spain. The analysis was carried out in 15 polymorphic bands corresponding to the albumin fraction of the storage proteins. The relationship between bands displayed one case of allelism and four of linkage. These results should be considered as the baseline of the genetics of these proteins and suggest that they could be useful for the evaluation of the genetic variability in chestnut. (Author) 13 refs.

  19. Nitrogen and phosphorus compounds in the aleurone grains of Iris pseudoacorus endosperm and Pisum sativum cotyledons

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    Ligia Konopska

    2015-05-01

    Full Text Available Aleurone grains from Iris pseudoacorus endosperm and Pisum sativum cotyledons were isolated partly according to Tombs's method (1967. Nitrogen compounds content was determined in them by Kjeldahl's micromethod, and in the particular fractions after Thiman and Laloraya (1960. Mainly protein N was detected in the aleurone grains, constituting 14.8 and 15.2 per cent of the dry mass of pea and Iris seeds, respectively. Moreover, phosphorus compounds were fractionated according to Holden and Pirie (1955. Analyses demonstrated the presence in aleurone grains of inorganic P, acid-soluble organophosphorus compounds, phospholipids and RNA.

  20. Placental transfer of rilpivirine in an ex vivo human cotyledon perfusion model.

    Science.gov (United States)

    Mandelbrot, Laurent; Duro, Dominique; Belissa, Emilie; Peytavin, Gilles

    2015-05-01

    Placental transfers of the HIV nonnucleoside reverse transcriptase inhibitor rilpivirine were investigated in 8 term human cotyledons perfused with rilpivirine (400 ng/ml) in the maternal-to-fetal direction. The mean fetal transfer rate (FTR) (fetal/maternal concentration at steady state from 15 to 90 min) was 26% ± 8% (mean ± standard deviation), and the clearance index (rilpivirine FTR/antipyrine FTR) was 61% ± 20%. This shows that rilpivirine crosses the placenta at a relatively high rate, suggesting that the fetus is exposed to the compound during treatment of the mother. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  1. Placental transfer of darunavir in an ex vivo human cotyledon perfusion model.

    Science.gov (United States)

    Mandelbrot, Laurent; Duro, Dominique; Belissa, Emilie; Peytavin, Gilles

    2014-09-01

    Placental transfer of the HIV protease inhibitor darunavir was investigated in 5 term human cotyledons perfused with darunavir (1,000 ng/ml) in the maternal to fetal direction. The mean (± the standard deviation [SD]) fetal transfer rate (FTR) (fetal/maternal concentration at steady state from 30 to 90 min) was 15.0%±2.1%, and the mean (±SD) clearance index (darunavir FTR/antipyrine FTR) was 40.3%±5.8%. This shows that darunavir crosses the placenta at a relatively low rate, resulting in fetal exposure. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

  2. IN-VITRO REGENERATION AND CALLUS FORMATION FROM DIFFERENT PARTS OF SEEDLING OF MUCUNA PRURIENS BAK ñ A VALUABLE MEDICINAL PLANT

    Directory of Open Access Journals (Sweden)

    SHALINI PATEL

    2007-01-01

    Full Text Available Callus proliferation was studied on cotyledon, leaf and stem explant of Mucuna pruriens Bakcultured on Murashige and Skoogís medium (MS supplemented with 2,4-D, IBA, NAA and BAPalone or in combination. Light brown callus formation was followed by formation of milky whitecallus on the surface of young excised shoots and leaf tissues of Mucuna pruriens. Sometimesgreen callus was also observed. Development of root and stem with leaves were investigated fromexcised stem, leaf and cotyledon tissues.

  3. Micro-CT observations of the 3D distribution of calcium oxalate crystals in cotyledons during maturation and germination in Lotus miyakojimae seeds.

    Science.gov (United States)

    Yamauchi, Daisuke; Tamaoki, Daisuke; Hayami, Masato; Takeuchi, Miyuki; Karahara, Ichirou; Sato, Mayuko; Toyooka, Kiminori; Nishioka, Hiroshi; Terada, Yasuko; Uesugi, Kentaro; Takano, Hidekazu; Kagoshima, Yasushi; Mineyuki, Yoshinobu

    2013-06-01

    The cotyledon of legume seeds is a storage organ that provides nutrients for seed germination and seedling growth. The spatial and temporal control of the degradation processes within cotyledons has not been elucidated. Calcium oxalate (CaOx) crystals, a common calcium deposit in plants, have often been reported to be present in legume seeds. In this study, micro-computed tomography (micro-CT) was employed at the SPring-8 facility to examine the three-dimensional distribution of crystals inside cotyledons during seed maturation and germination of Lotus miyakojimae (previously Lotus japonicus accession Miyakojima MG-20). Using this technique, we could detect the outline of the embryo, void spaces in seeds and the cotyledon venation pattern. We found several sites that strongly inhibited X-ray transmission within the cotyledons. Light and polarizing microscopy confirmed that these areas corresponded to CaOx crystals. Three-dimensional observations of dry seeds indicated that the CaOx crystals in the L. miyakojimae cotyledons were distributed along lateral veins; however, their distribution was limited to the abaxial side of the procambium. The CaOx crystals appeared at stage II (seed-filling stage) of seed development, and their number increased in dry seeds. The number of crystals in cotyledons was high during germination, suggesting that CaOx crystals are not degraded for their calcium supply. Evidence for the conservation of CaOx crystals in cotyledons during the L. miyakojimae germination process was also supported by the biochemical measurement of oxalic acid levels.

  4. [Storage of cereal bars with mesquite cotyledon (Prosopis chilensis (Mol) Stuntz)].

    Science.gov (United States)

    Escobar, B; Estévez, A M; Guiñez, M A

    2000-06-01

    The use of walnut or peanut in the elaboration of cereal bars represents a possible risk of undesirable changes during their storage due to their high content of unsaturated fatty acids in the oil; oxidizing of the fatty acids is one of the main causes of deterioration. Development of new snack products implies the use of packages that should protect the food against the damage caused by light and reduce the oxygen concentration of in their interior. The objective of this investigation was to evaluate the physical, chemical and sensory changes in the storage of cereal bars with peanut or walnut and mezquite cotyledon subjected to two thermal treatments, packed in cellophane or milky polypropilene. Four types of bars were elaborated with 6% of mezquite cotyledon, treated by microwaves or toasted, and with 18% of peanut or walnut. The bars were stored for 90 days at room temperature; and each 30 days it was measured moisture content, peroxides index, water activity, sensory quality and acceptability. The peroxides values (4.9-13.8 meq/kg of oil) indicates that the shelf life of the bars in all the studied treatments was 90 days. The packaging materials used allows to maintain in good conditions, for 3 months, the cereals bars of moisture (7.4-11.2%), water activity (0.50-0.65) and sensory acceptability.

  5. Patterns of embryo-sac organization, synergid degeneration and cotyledon orientation in Linum usitatissimum L.

    Science.gov (United States)

    Russell, S D; Mao, L J

    1990-08-01

    The embryo sac of Linum usitatissimum consists, as in most angiosperms, of the egg, two synergids, central cell and antipodals. In Linum the embryo sac is strongly polarized in the longitudinal axis, but rotationally random relative to the vascular bundles of the ovule and ovary. Synergids designated right or left based on their orientation relative to the egg can be distinguished unambiguously if viewed from one pole of the embryo sac - in this case, the chalaza was used as the reference point. The synergid most likely to degenerate is the left (60%), proximal (52.3%) or septal-facing (52.7%) synergid. The volume and the surface area of the filiform apparatus of the left synergid is significantly smaller than that of the right synergid. Synergid-degeneration patterns varied between individual plants, indicating genetic control; however, the preference for the proximal and septal-facing synergid, although weak, indicates the possibility of some physiological influence. The cotyledons appear to assume bilateral symmetry with respect to the ovule only once endosperm digestion has begun. As the cotyledons grow, the embryo rotates to occupy the widest part of the embryo sac, thus imposing bilateral symmetry between the embryo and seed; prior to that time, the early and heart-shaped embryos are randomly oriented.

  6. Purification of apyrase from yellow lupin cotyledons after extraction with perchloric acid.

    Science.gov (United States)

    Guranowski, A; Starzyńska, E; Rataj-Guranowska, M; Günther Sillero, M A

    1991-08-01

    Neutralized 1 M perchloric acid (PCA) extracts of yellow lupin (Lupinus luteus) seedling cotyledons contain considerable amounts of apyrase (EC 3.6.1.5). Investigators who use PCA extraction for the estimation of nucleotide levels, particularly in plant tissues, should be aware of this danger. Only when the material is treated with 1.8-2 M PCA are the extracts obtained free of apyrase activity. Chromatography of neutralized 1 M extracts obtained from 7-day-old seedling cotyledons on DEAE-Sephacel and Sephadex G-100 yields almost homogeneous apyrase that shows a band of M(r) 51,000 on sodium dodecyl sulfate-polyacrylamide gel electrophoresis gels. The molecular weight of the native enzyme is also about 51,000. The apyrase preparation is free of nonspecific phosphatases, nucleotidases, and adenosine nucleosidase, as well as dinucleoside polyphosphate-degrading enzymes. The apyrase exhibits a broad pH optimum between 6 and 8. Mg2+ and Ca2+ are required for maximum activity; Zn2+ and Mn2+ are less effective and Co2+, Ni2+, and Cd2+ are without effect. The Km values for ATP and ADP are about 20 microM. All common 5'-nucleoside tri- and diphosphates as well as adenosine 5'-tetraphosphate are substrates.

  7. Cloning, Expression and Purification of an Acetoacetyl CoA Thiolase from Sunflower Cotyledon

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    James H. Dyer, Anthony Maina, Iris D. Gomez, Melissa Cadet, Silke Oeljeklaus, Anke C. Schiedel

    2009-01-01

    Full Text Available Thiolase I and II coexist as part of the glyoxysomal β-oxidation system in sunflower (Helianthus annuus L. cotyledons, the only system shown to have both forms. The importance of thiolases can be underscored not only by their ubiquity, but also by their involvement in a wide variety of processes in plants, animals and bacteria. Here we describe the cloning, expression and purification of acetoacetyl CoA thiolase (AACT in enzymatically active form. Use of the extensive amount of sequence information from the databases facilitated the efficient generation of the gene-specific primers used in the RACE protocols. The recombinant AACT (1233 bp shares 75% similarity with other plant AACTs. Comparison of specific activity of this recombinant AACT to a previously reported enzyme purified from primary sunflower cotyledon tissue was very similar (263 nkat/mg protein vs 220 nkat/mg protein, respectively. Combining the most pure fractions from the affinity column, the enzyme was purified 88-fold with a 55% yield of the enzymatically active, 47 kDa AACT.

  8. Organization of lipid reserves in cotyledons of primed and aged sunflower seeds.

    Science.gov (United States)

    Walters, Christina; Landré, Pierre; Hill, Lisa; Corbineau, Françoise; Bailly, Christophe

    2005-10-01

    Imbibing sunflower (Helianthus annuus L., cv. Briosol) seeds at water potentials between -2 MPa and -5 MPa leads to faster (priming) or slower (accelerated ageing) germination depending on the temperature and duration of treatment. Mobilization of food reserves may be associated with the changes in seed vigor. To study this, morphological, biochemical and phase properties of lipid, the major food reserve in sunflower, were compared in freshly harvested (i.e., control), primed and aged sunflower cotyledons using electron microscopy, biochemical analyses and differential scanning calorimetry, respectively. Lipid bodies became smaller and more dispersed throughout the cytoplasm during priming and ageing. Despite ultrastructural changes, there were few measured changes in biochemistry of the neutral lipid component; lipid content, proportion of saturated and unsaturated fatty acids and level of free fatty acids were unchanged in primed and slightly aged seeds, with only severely aged seeds showing a net decrease in polyunsaturated fatty acids and an increase in free fatty acids. Subtle changes in the calorimetric behavior of lipids within sunflower cotyledons were observed. Sunflower lipids exhibited polymorphic crystalline and amorphous solid phases when cooled to priming decreased the rate of crystallization in vivo and ageing increased the rate of crystallization, but decreased percentage crystallinity. The observed changes in thermal behavior in vivo are consistent with losses and gains, respectively, of interacting non-lipid moieties in the triacylglycerol matrix.

  9. Enzymic degradiation of starch granules in the cotyledons of germinating peas.

    Science.gov (United States)

    Juliano, B O; Varner, J E

    1969-06-01

    Starch, total alpha- and beta-amylase, and phosphorylase levels and the zymogram patterns of these 3 starch-degrading enzymes were determined in the cotyledons of smooth pea (Pisum sativum L.) during the first 15 days of germination. Starch is degraded slowly in the first 6 days; during this time, alpha-amylase is very low, beta-amylase is present at a constant level while phosphorylase gradually increases and reaches a peak on the fifth day. Beginning on the sixth day there is a more rapid degradation of starch which coincides with alpha-amylase production. One phosphorylase band and 2 beta-amylase bands are present in the zymogram of the imbibed cotyledon. An additional phosphorylase band and 1 alpha-amylase band appear during germination. Seeds imbibed in benzyladenine, chloramphenicol, and in cycloheximide show retarded growth and slower starch degradation and enzyme production than the controls. We conclude that alpha-amylase is the major enzyme involved in the initial degradation of starch into more soluble forms while phosphorylase and beta-amylase assist in the further conversion to free sugars.

  10. Formats

    Directory of Open Access Journals (Sweden)

    Gehmann, Ulrich

    2012-03-01

    Full Text Available In the following, a new conceptual framework for investigating nowadays’ “technical” phenomena shall be introduced, that of formats. The thesis is that processes of formatting account for our recent conditions of life, and will do so in the very next future. It are processes whose foundations have been laid in modernity and which will further unfold for the time being. These processes are embedded in the format of the value chain, a circumstance making them resilient to change. In addition, they are resilient in themselves since forming interconnected systems of reciprocal causal circuits.Which leads to an overall situation that our entire “Lebenswelt” became formatted to an extent we don’t fully realize, even influencing our very percep-tion of it.

  11. De novo assembly of a cotyledon-enriched transcriptome map of Vicia faba (L. for transfer cell research

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    Kiruba Shankari eArun Chinnappa

    2015-04-01

    Full Text Available Vicia faba (L. is an important cool-season grain legume species used widely in agriculture but also in plant physiology research, particularly as an experimental model to study transfer cell (TC development. Adaxial epidermal cells of isolated cotyledons can be induced to form functional TCs, thus providing a valuable experimental system to investigate genetic regulation of TC development. The genome of V. faba is exceedingly large (ca. 13 Gb, however, and limited genomic information is available for this species. To provide a resource for transcript profiling of epidermal TC development, we have undertaken de novo assembly of a cotyledon-enriched transcriptome map for V. faba. Illumina paired-end sequencing of total RNA pooled from different tissues and different stages, including isolated cotyledons induced to form TCs, generated 69.5M reads, of which 65.8M were used for assembly following trimming and quality control. Assembly using a De-Bruijn graph-based approach within CLC Genomics Workbench v6.1 generated 21,297 contigs, of which 80.6% were successfully annotated against GO terms. The assembly was validated against known V. faba cDNAs held in GenBank, including transcripts previously identified as being specifically expressed in epidermal cells across TC trans-differentiation. This cotyledon-enriched transcriptome map therefore provides a valuable tool for future transcript profiling of epidermal TC development, and also enriches the genetic resources available for this important legume crop species.

  12. Effect of cytokinins on shoot regeneration from cotyledon and leaf segment of stem mustard (Brassica juncea var. tsatsai)

    NARCIS (Netherlands)

    Guo, D.P.; Zhu, Z.J.; Hu, X.X.; Zheng Sijun, S.J.

    2005-01-01

    Cotyledon and leaf segments of stem mustard (Brassica juncea var. tsatsai) were cultured on Murashige and Skoog medium supplemented with various concentrations of different cytokinins [6-benzyladenine (BA), N-(2-chloro-4-pyridyl)-n-phenylurea (CPPU), 6-furfurylaminopurine (KT) and thidiazuron (TDZ)

  13. Effect of cytokinins on shoot regeneration from cotyledon and leaf segment of stem mustard (Brassica juncea var. tsatsai)

    NARCIS (Netherlands)

    Guo, D.P.; Zhu, Z.J.; Hu, X.X.; Zheng Sijun, S.J.

    2005-01-01

    Cotyledon and leaf segments of stem mustard (Brassica juncea var. tsatsai) were cultured on Murashige and Skoog medium supplemented with various concentrations of different cytokinins [6-benzyladenine (BA), N-(2-chloro-4-pyridyl)-n-phenylurea (CPPU), 6-furfurylaminopurine (KT) and thidiazuron (TDZ)

  14. Analysis of the change of polyamine during the cold treatment in spring radish young cotyledons and hypocotyls

    Energy Technology Data Exchange (ETDEWEB)

    Lee, S.C.; Park, J.W.; Cho, B.H. [University of Suwon, Suwon (Korea, Republic of)

    1999-02-01

    The concentration of polyamine and the relationship between the concentration of PA and cold resistance were analysed during the cold stress in the cotyledons and hypocotyls of young spring radishes. The concentration of PUT was increased during the cold stress in the cotyledons and the concentration of PUT and SPD was changed significantly all the stress time. From the results, we suggested that PUT and SPD were synthesized against cold stress or separated from the bound PA during the cold stress. But, the concentration of SPM was not significantly changed during the cold stress. Only SPD existed in the control hypocotyls. The concentration of SPD was increased during the cold stress, but was decreased dramatically during continuously cold stress. The reactivity against stress of hypocotyls was generally more sensitive during the cold treatment than that of the cotyledons because of the lower concentration of PA in the hypocotyls. PUT and SPD were responsible for the resistance of cold stress in the cotyledons and PA did not play an important role on the resistance of cold stress in the hypocotyls. In this study we suggest that PUT and SPD were responsible for the increase of the resistance against the cold stress. 14 refs., 7 figs.

  15. Ectopic overexpression of castor bean LEAFY COTYLEDON2 (LEC2) in Arabidopsis triggers the expression of genes that encode regulators of seed maturation and oil body proteins in vegetative tissues.

    Science.gov (United States)

    Kim, Hyun Uk; Jung, Su-Jin; Lee, Kyeong-Ryeol; Kim, Eun Ha; Lee, Sang-Min; Roh, Kyung Hee; Kim, Jong-Bum

    2013-01-01

    The LEAFY COTYLEDON2 (LEC2) gene plays critically important regulatory roles during both early and late embryonic development. Here, we report the identification of the LEC2 gene from the castor bean plant (Ricinus communis), and characterize the effects of its overexpression on gene regulation and lipid metabolism in transgenic Arabidopsis plants. LEC2 exists as a single-copy gene in castor bean, is expressed predominantly in embryos, and encodes a protein with a conserved B3 domain, but different N- and C-terminal domains to those found in LEC2 from Arabidopsis. Ectopic overexpression of LEC2 from castor bean under the control of the cauliflower mosaic virus (CaMV) 35S promoter in Arabidopsis plants induces the accumulation of transcripts that encodes five major transcription factors (the LEAFY COTYLEDON1 (LEC1), LEAFY COTYLEDON1-LIKE (L1L), FUSCA3 (FUS3), and ABSCISIC ACID INSENSITIVE 3 (ABI3) transcripts for seed maturation, and WRINKELED1 (WRI1) transcripts for fatty acid biosynthesis), as well as OLEOSIN transcripts for the formation of oil bodies in vegetative tissues. Transgenic Arabidopsis plants that express the LEC2 gene from castor bean show a range of dose-dependent morphological phenotypes and effects on the expression of LEC2-regulated genes during seedling establishment and vegetative growth. Expression of castor bean LEC2 in Arabidopsis increased the expression of fatty acid elongase 1 (FAE1) and induced the accumulation of triacylglycerols, especially those containing the seed-specific fatty acid, eicosenoic acid (20:1(Δ11)), in vegetative tissues.

  16. Ectopic overexpression of castor bean LEAFY COTYLEDON2 (LEC2 in Arabidopsis triggers the expression of genes that encode regulators of seed maturation and oil body proteins in vegetative tissues

    Directory of Open Access Journals (Sweden)

    Hyun Uk Kim

    2014-01-01

    Full Text Available The LEAFY COTYLEDON2 (LEC2 gene plays critically important regulatory roles during both early and late embryonic development. Here, we report the identification of the LEC2 gene from the castor bean plant (Ricinus communis, and characterize the effects of its overexpression on gene regulation and lipid metabolism in transgenic Arabidopsis plants. LEC2 exists as a single-copy gene in castor bean, is expressed predominantly in embryos, and encodes a protein with a conserved B3 domain, but different N- and C-terminal domains to those found in LEC2 from Arabidopsis. Ectopic overexpression of LEC2 from castor bean under the control of the cauliflower mosaic virus (CaMV 35S promoter in Arabidopsis plants induces the accumulation of transcripts that encodes five major transcription factors (the LEAFY COTYLEDON1 (LEC1, LEAFY COTYLEDON1-LIKE (L1L, FUSCA3 (FUS3, and ABSCISIC ACID INSENSITIVE 3 (ABI3 transcripts for seed maturation, and WRINKELED1 (WRI1 transcripts for fatty acid biosynthesis, as well as OLEOSIN transcripts for the formation of oil bodies in vegetative tissues. Transgenic Arabidopsis plants that express the LEC2 gene from castor bean show a range of dose-dependent morphological phenotypes and effects on the expression of LEC2-regulated genes during seedling establishment and vegetative growth. Expression of castor bean LEC2 in Arabidopsis increased the expression of fatty acid elongase 1 (FAE1 and induced the accumulation of triacylglycerols, especially those containing the seed-specific fatty acid, eicosenoic acid (20:1Δ11, in vegetative tissues.

  17. Growth and Allocation of Dry Matter in Bean Seedlings Developed up to the Senescence of the Cotyledons

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    Ramón DÍaz-ruiz

    2008-12-01

    Full Text Available The allocation of dry matter in seedling of the common bean (Phaseolus vulgaris L. depends on the nutrient content in the cotyledons on principle of germination. The importance of these structures for the growth of the seedling ranges from the time of germination to the emergence of the seedling and the time when the simple leaves can realize photosynthesis. The objective of this research was to study and quantify the distribution of dry matter from the stage of germination until senescence of cotyledons during the seedling stage. Two experiments were conducted using the common bean variety Cacahuate-72, one in a greenhouse and another in growth chamber with a constant temperature of 25oC. To determine the dry weight of the structures sampling was carried out at different ages of the seedling. The stem accumulated more dry matter than the root, 56% and 44% respectively. The distribution of dry matter in the shoot structures was in the following order: simple leaves 60%, hypocotyl 25%, epicotyle 8%, petioles 5% and fi rst trifoliate leaf 2%. Root dry matter was distributed in the following order: secondary roots 46%, adventitious roots 42%, taproot 10% and tertiary roots 2%. The cotyledons exhausted its reserves of nutrients by the 18th day and they senesced at the same time. At the time of senescence of the cotyledons the hypocotyl structure was longer than the stem. Considering the root, secondary roots presented more length and were the most abundant in number. The input of fertilizer to the soil is necessary when cotyledons are beginning the process of senescence.

  18. Development and properties of a wax ester hydrolase in the cotyledons of jojoba seedlings.

    Science.gov (United States)

    Huang, A H; Moreau, R A; Liu, K D

    1978-03-01

    The activity of a wax ester hydrolase in the cotyledons of jojoba (Simmondsia chinensis) seedlings increased drastically during germination, parallel to the development of the gluconeogenic process. The enzyme at its peak of development was obtained in association with the wax body membrane, and its properties were studied. It had an optimal activity at alkaline pH (8.5-9). The apparent K(m) value for N-methylindoxylmyristate was 93 muM. It was stable at 40 C for 30 min but was inactivated at higher temperature. Various divalent cations and ethylenediaminetetraacetate had little effect on the activity. p-Chloromercuribenzoate was a strong inhibitor of the enzyme activity, and its effect was reversed by subsequent addition of dithiothreitol. It had a broad substrate specificity with highest activities on monoglycerides, wax esters, and the native substrate (jojoba wax).

  19. Qualitative changes in the proteins of cotyledons during cold and warm stratification of Acer platanoides seeds

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    Tomasz Malinowski

    2014-01-01

    Full Text Available In Norway maple (Acer platanoides L. seeds, during dormancy breakage there appeared some qualitative changes in protein composition of the cotyledons. After 48h of soaking and in the first week of stratification, the number of different proteins decreased. This decrease in number of proteins was probably associated with the effect of hydration of embryo tissue. Protein patterns from imbibed seeds exposed to cold (3oC and warm (15oC treatments were not significantly different. The influence of temperature on protein patterns became visible in the third week of stratification, when a few new proteins appeared. One of them, designated B, appeared only during cold stratification before radicles protrusion. They were also present in seeds that had completed germination. These proteins are presumably associated with the process of dormancy breakage.

  20. Effect of taurocholic acid on fetoplacental arterial pressures in a dual perfusion placental cotyledon model: a novel approach to intrahepatic cholestasis of pregnancy.

    Science.gov (United States)

    Dolinsky, Brad M; Zelig, Craig M; Paonessa, Damian J; Hoeldtke, Nathan J; Napolitano, Peter G

    2014-01-01

    To determine if continuous infusion of taurocholic acid into the fetoplacental and intervillous circulation of a placental cotyledon affects the fetal arterial pressure response after injection of the thromboxane mimetic U44619. Taurine conjugated bile acid is one bile acid putatively mediating intrahepatic cholestasis of pregnancy (ICP). We selected 5 placentas from normal, unlabored patients. Two cotyledons from each placenta were isolated and dually perfused. Taurocholic acid was continuously infused into the fetoplacental and intervillous circulation of the test cotyledon. After 30 minutes U44619 was injected into both the test and control cotyledon vascular circuits. Pressure excursions were measured and compared to baseline pressures using a paired Student's t test. There was significant attenuation of the pressure excursion in the cotyledons perfused with taurocholic acid as compared to controls after injection of U44619. The difference from baseline in the taurocholic cotyledon compared with controls was 44.2 mmHg vs. 71.8 mmHg (p = 0.009). The perfusion of taurocholic acid attenuated the pressure response to thromboxane mimetic U44619 in the fetoplacental arterial circulation of a placental cotyledon as compared to control. This finding in our ex-vivo model may represent changes that occur in the placental vasculature with intrahepatic cholestasis of pregnancy. These placentas may have dysregulated vascular tone, which could contribute to the adverse fetal effects observed in ICP.

  1. Peroxisomal membrane manganese superoxide dismutase: characterization of the isozyme from watermelon (Citrullus lanatus Schrad.) cotyledons.

    Science.gov (United States)

    Rodríguez-Serrano, María; Romero-Puertas, María C; Pastori, Gabriela M; Corpas, Francisco J; Sandalio, Luisa M; del Río, Luis A; Palma, José M

    2007-01-01

    In this work the manganese superoxide dismutase (Mn-SOD) bound to peroxisomal membranes of watermelon cotyledons (Citrullus lanatus Schrad.) was purified to homogeneity and some of its molecular properties were determined. The stepwise purification procedure consisted of ammonium sulphate fractionation, batch anion-exchange chromatography, and anion-exchange and gel-filtration column chromatography using a fast protein liquid chromatography system. Peroxisomal membrane Mn-SOD (perMn-SOD; EC 1.15.1.1) was purified 5600-fold with a yield of 2.6 mug of enzyme g(-1) of cotyledons, and had a specific activity of 480 U mg(-1) of protein. The native molecular mass determined for perMn-SOD was 108 000 Da, and it was composed of four equal subunits of 27 kDa, which indicates that perMn-SOD is a homotetramer. Ultraviolet and visible absorption spectra of the enzyme showed a shoulder at 275 nm and two absorption maxima at 448 nm and 555 nm, respectively. By isoelectric focusing, a pI of 5.75 was determined for perMn-SOD. In immunoblot assays, purified perMn-SOD was recognized by a polyclonal antibody against Mn-SOD from pea leaves, and the peroxisomal enzyme rapidly dissociated in the presence of dithiothreitol and SDS. The potential binding of the Mn-SOD isozyme to the peroxisomal membrane was confirmed by immunoelectron microscopy analysis. The properties of perMn-SOD and the mitMn-SOD are compared and the possible function in peroxisomal membranes of the peripheral protein Mn-SOD is discussed.

  2. TOR-inhibitor insensitive-1 (TRIN1) regulates cotyledons greening in Arabidopsis.

    Science.gov (United States)

    Li, Linxuan; Song, Yun; Wang, Kai; Dong, Pan; Zhang, Xueyan; Li, Fuguang; Li, Zhengguo; Ren, Maozhi

    2015-01-01

    Target of Rapamycin (TOR) is an eukaryotic protein kinase and evolutionally conserved from the last eukaryotic common ancestor (LECA) to humans. The growing evidences have shown that TOR signaling acts as a central controller of cell growth and development. The downstream effectors of TOR have been well-identified in yeast and animals by using the immunosuppression agent rapamycin. However, less is known about TOR in plants. This is largely due to the fact that plants are insensitive to rapamycin. In this study, AZD8055 (AZD), the novel ATP-competitive inhibitor of TOR, was employed to decipher the downstream effectors of TOR in Arabidopsis. One AZD insensitive mutant, T O R - i nhibitor i n sensitive- 1 (trin1), was screened from 10,000 EMS-induced mutation seeds. The cotyledons of trin1 can turn green when its seeds were germinated on ½ MS medium supplemented with 2 μM AZD, whereas the cotyledons greening of wild-type (WT) can be completely blocked at this concentration. Through genetic mapping, TRIN1 was mapped onto the long arm of chromosome 2, between markers SGCSNP26 and MI277. Positional cloning revealed that TRIN1 was an allele of ABI4, which encoded an ABA-regulated AP2 domain transcription factor. Plants containing P35S::TRIN1 or P35S::TRIN1-GUS were hypersensitive to AZD treatment and displayed the opposite phenotype observed in trin1. Importantly, GUS signaling was significantly enhanced in P35S::TRIN1-GUS transgenic plants in response to AZD treatment, indicating that suppression of TOR resulted in the accumulation of TRIN1. These observations revealed that TOR controlled seed-to-seedling transition by negatively regulating the stability of TRIN1 in Arabidopsis. For the first time, TRIN1, the downstream effector of TOR signaling, was identified through a chemical genetics approach.

  3. Sugar Treatments Can Induce AcLEAFY COTYLEDON1 Expression and Trigger the Accumulation of Storage Products during Prothallus Development of Adiantum capillus-veneris

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    Shu-Nong Bai

    2017-04-01

    Full Text Available A seed is an intricate structure. Of the two development processes involved in seed formation, seed maturation, or seed program includes accumulation of storage products, acquisition of desiccation tolerance, and induction of dormancy. Little is known about how these processes were originated and integrated into the life cycle of seed plants. While previous investigation on seed origin was almost exclusively through fossil comparison in paleobotany, a wealth of information about the key role of LEAFY COTYLEDON1 (LEC1 in seed formation of spermatophyte inspired a new approach to investigating the seed origin mystery. Here, we examined the expression pattern of AcLEC1 during the entire life cycle of Adiantum capillus-veneris, a non-seed plant, confirmed no AcLEC1 gene expression detectable in prothalli, demonstrated inductive expressed by both sucrose and glucose in prothalli. As expected, we found that sugar treatments delayed prothallus development, promoted differentiation of reproductive organs, and triggered accumulation of storage products. These findings demonstrated links between the sugar treatments and the induction of AcLEC1 expression, as well as the sugar treatments and the events such as accumulation of storage products, which is similar to those considered as seed maturation process in seed plants. These links support a modified hypothesis that inductive expression of LEC1 homologs during embryogenesis might be a key innovation for the origin of the seed program.

  4. LEAFY COTYLEDON1-CASEIN KINASE I-TCP15-PHYTOCHROME INTERACTING FACTOR4 Network Regulates Somatic Embryogenesis by Regulating Auxin Homeostasis1[OPEN

    Science.gov (United States)

    Min, Ling; Hu, Qin; Li, Yaoyao; Xu, Jiao; Ma, Yizan; Zhu, Longfu; Yang, Xiyan; Zhang, Xianlong

    2015-01-01

    Somatic embryogenesis (SE) is an efficient tool for the propagation of plant species and also, a useful model for studying the regulatory networks in embryo development. However, the regulatory networks underlying the transition from nonembryogenic callus to somatic embryos during SE remain poorly understood. Here, we describe an upland cotton (Gossypium hirsutum) CASEIN KINASE I gene, GhCKI, which is a unique key regulatory factor that strongly affects SE. Overexpressing GhCKI halted the formation of embryoids and plant regeneration because of a block in the transition from nonembryogenic callus to somatic embryos. In contrast, defective GhCKI in plants facilitated SE. To better understand the mechanism by which GhCKI regulates SE, the regulatory network was analyzed. A direct upstream negative regulator protein, cotton LEAFY COTYLEDON1, was identified to be targeted to a cis-element, CTTTTC, in the promoter of GhCKI. Moreover, GhCKI interacted with and phosphorylated cotton CINCINNATA-like TEOSINTE BRANCHED1-CYCLOIDEA-PCF transcription factor15 by coordinately regulating the expression of cotton PHYTOCHROME INTERACTING FACTOR4, finally disrupting auxin homeostasis, which led to increased cell proliferation and aborted somatic embryo formation in GhCKI-overexpressing somatic cells. Our results show a complex process of SE that is negatively regulated by GhCKI through a complex regulatory network. PMID:26491146

  5. LEAFY COTYLEDON1-CASEIN KINASE I-TCP15-PHYTOCHROME INTERACTING FACTOR4 Network Regulates Somatic Embryogenesis by Regulating Auxin Homeostasis.

    Science.gov (United States)

    Min, Ling; Hu, Qin; Li, Yaoyao; Xu, Jiao; Ma, Yizan; Zhu, Longfu; Yang, Xiyan; Zhang, Xianlong

    2015-12-01

    Somatic embryogenesis (SE) is an efficient tool for the propagation of plant species and also, a useful model for studying the regulatory networks in embryo development. However, the regulatory networks underlying the transition from nonembryogenic callus to somatic embryos during SE remain poorly understood. Here, we describe an upland cotton (Gossypium hirsutum) CASEIN KINASE I gene, GhCKI, which is a unique key regulatory factor that strongly affects SE. Overexpressing GhCKI halted the formation of embryoids and plant regeneration because of a block in the transition from nonembryogenic callus to somatic embryos. In contrast, defective GhCKI in plants facilitated SE. To better understand the mechanism by which GhCKI regulates SE, the regulatory network was analyzed. A direct upstream negative regulator protein, cotton LEAFY COTYLEDON1, was identified to be targeted to a cis-element, CTTTTC, in the promoter of GhCKI. Moreover, GhCKI interacted with and phosphorylated cotton CINCINNATA-like TEOSINTE BRANCHED1-CYCLOIDEA-PCF transcription factor15 by coordinately regulating the expression of cotton PHYTOCHROME INTERACTING FACTOR4, finally disrupting auxin homeostasis, which led to increased cell proliferation and aborted somatic embryo formation in GhCKI-overexpressing somatic cells. Our results show a complex process of SE that is negatively regulated by GhCKI through a complex regulatory network.

  6. Appearance and Disappearance of Cyanide-Resistant Respiration in Vigna mungo Cotyledons during and following Germination of the Axis.

    Science.gov (United States)

    Morohashi, Y; Matsushima, H

    1983-09-01

    Mitochondrial preparations isolated from black gram (Vigna mungo L.) cotyledons exhibited cyanide-resistant respiration which was of mitochondrial origin. The appearance and the disappearance of this alternative respiration took place during and following imbibition. During the first 6 hours of imbibition, the respiration was completely inhibited by cyanide, but after this time the alternative respiration markedly developed, reaching a maximal cyanide-resistance 12 to 16 hours after the start of imbibition. Subsequently, the alternative respiration gradually disappeared. The actions of cycloheximide and chloramphenicol indicated that the appearance was dependent on cytoplasmic protein synthesis and that the disappearance depended on both cytoplasmic and mitochondrial protein synthesis. The alternative pathway contributed to state 4 respiration, but not to state 3 respiration, in mitochondria from 1-day-old cotyledons. On day 3, it contributed to neither state 3 nor state 4.

  7. Sugar transport into protoplasts isolated from developing soybean cotyledons : I. Protoplast isolation and general characteristics of sugar transport.

    Science.gov (United States)

    Lin, W; Schmitt, M R; Hitz, W D; Giaquinta, R T

    1984-08-01

    A procedure is described to isolated functional protoplasts from developing soybean (Glycine max L. Merr. cv Wye) cotyledons. Studies of sucrose and hexose uptake into these protoplasts show that the plasmalemma of cotyledons during the stage of rapid seed growth contains a sucrose-specific carrier which is energetically and kinetically distinct from the system(s) involved in hexose transport. For example, sucrose, but not hexose uptake: (a) is inhibited by alkaline pH and the nonpermeant SH modifier, p-chloromercuribenzene sulfonic acid; (b) is stimulated by fusicoccin; (c) shows both a saturable and a linear component of uptake in response to substrate concentration; and (d) displays a sharp temperature response (high Q(10) value and high activation energies).

  8. Long-term, high-resolution confocal time lapse imaging of Arabidopsis cotyledon epidermis during germination.

    Science.gov (United States)

    Peterson, Kylee M; Torii, Keiko U

    2012-12-31

    Imaging in vivo dynamics of cellular behavior throughout a developmental sequence can be a powerful technique for understanding the mechanics of tissue patterning. During animal development, key cell proliferation and patterning events occur very quickly. For instance, in Caenorhabditis elegans all cell divisions required for the larval body plan are completed within six hours after fertilization, with seven mitotic cycles(1); the sixteen or more mitoses of Drosophila embryogenesis occur in less than 24 hr(2). In contrast, cell divisions during plant development are slow, typically on the order of a day (3,4,5) . This imposes a unique challenge and a need for long-term live imaging for documenting dynamic behaviors of cell division and differentiation events during plant organogenesis. Arabidopsis epidermis is an excellent model system for investigating signaling, cell fate, and development in plants. In the cotyledon, this tissue consists of air- and water-resistant pavement cells interspersed with evenly distributed stomata, valves that open and close to control gas exchange and water loss. Proper spacing of these stomata is critical to their function, and their development follows a sequence of asymmetric division and cell differentiation steps to produce the organized epidermis (Fig. 1). This protocol allows observation of cells and proteins in the epidermis over several days of development. This time frame enables precise documentation of stem-cell divisions and differentiation of epidermal cells, including stomata and epidermal pavement cells. Fluorescent proteins can be fused to proteins of interest to assess their dynamics during cell division and differentiation processes. This technique allows us to understand the localization of a novel protein, POLAR(6), during the proliferation stage of stomatal-lineage cells in the Arabidopsis cotyledon epidermis, where it is expressed in cells preceding asymmetric division events and moves to a characteristic area of

  9. The effect of kinetin on cytochemical localization of Mg++ dependent ATP-ase in isolated lupine cotyledons

    Directory of Open Access Journals (Sweden)

    Roman Przymusiński

    2014-01-01

    Full Text Available ATP-ase activity stimulated with Mg++ ions was localized cytochermically in lupine cotyledons. Studies were also made of the effect of kinetin on this activity. Activity of Mg++ dependent ATP-ase was observed in plasmalemma, nucleus, nucleolus, endoplasmic reticulum, thylakoid membranes, prolamellar bodies, cell wall, and irilter-cellular spaces. Kinetin (6-furfurylaminpurine used in the experiment, stimulated ATP-ase activity, but dad not affect its localization.

  10. Response of cotyledon explants of Capsicum annuum L. cv. kujawianka to chosen plant growth regulators in in vitro culture

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    Alicja Fraś

    2014-02-01

    Full Text Available Shoot buds originated directly on cotyledon explants of Capsicum annuum L. cv. Kujawianka, when Linsmaier and Skoog medium was enriched with BAP (2 mg/l. Kinetin (2 mg/l or kinetin with IAA (1 mg/l + 1 mg/l induced indirect shoot buds regeneration from callus. Rooting was obtained with explants cultivated on a medium containing NAA (0,5 mg/l. Occurrence of the early stages of differentiation was proved at the histological level.

  11. Cotyledon cells of Vigna mungo seedlings use at least two distinct autophagic machineries for degradation of starch granules and cellular components.

    Science.gov (United States)

    Toyooka, K; Okamoto, T; Minamikawa, T

    2001-09-01

    alpha-Amylase is expressed in cotyledons of germinated Vigna mungo seeds and is responsible for the degradation of starch that is stored in the starch granule (SG). Immunocytochemical analysis of the cotyledon cells with anti-alpha-amylase antibody showed that alpha-amylase is transported to protein storage vacuole (PSV) and lytic vacuole (LV), which is converted from PSV by hydrolysis of storage proteins. To observe the insertion/degradation processes of SG into/in the inside of vacuoles, ultrastructural analyses of the cotyledon cells were conducted. The results revealed that SG is inserted into LV through autophagic function of LV and subsequently degraded by vacuolar alpha-amylase. The autophagy for SG was structurally similar to micropexophagy detected in yeast cells. In addition to the autophagic process for SG, autophagosome-mediated autophagy for cytoplasm and mitochondria was detected in the cotyledon cells. When the embryo axes were removed from seeds and the detached cotyledons were incubated, the autophagosome-mediated autophagy was observed, but the autophagic process for the degradation of SG was not detected, suggesting that these two autophagic processes were mediated by different cellular mechanisms. The two distinct autophagic processes were thought to be involved in the breakdown of SG and cell components in the cells of germinated cotyledon.

  12. The regulation of electron partitioning between the cytochrome and alternative pathways in soybean cotyledon and root mitochondria

    Energy Technology Data Exchange (ETDEWEB)

    Ribas-Carbo, M.; Lennon, A.M.; Robinson, S.A. [Duke Univ., Durham, NC (United States)] [and others

    1997-03-01

    The regulation of electron partitioning between the cytochrome (Cyt) and alternative pathways in soybean (Glycine max L. cv Ransom) mitochondria in the absence of added inhibitors has been studied using the oxygen isotope fractionation technique. This regulation can depend on several factors, including the amount of alternative oxidase protein, the redox status of the alternative oxidase regulatory sulfhydryl-disulfide system, the degree of activation by {alpha}-keto acids, and the concentration and redox state of the ubiquinone pool. We studied electron partitioning onto the alternative pathway in mitochondria isolated from etiolated and light-grown cotyledons and roots to ascertain how these factors interact in different tissues. In light-grown cotyledon mitochondria there is some partitioning to the alternative pathway in state 4, which is increased dramatically by either pyruvate or dithiothreitol. In etiolated cotyledon mitochondria, the alternative pathway shows little ability to complete for electrons with the Cyt pathway under any circumstances. In root mitochondria, control of alternative pathway activity is exercised by both the ubiquinone pool and the regulatory sulfhydryl-disulfide system. In addition, oxygen isotope fractionation by the Cyt and alternative pathways in mitochondria were identical to the fractionation for the respective pathways seen in intact tissue, suggesting that residual respiration is not present in the absence of inhibitors. 38 refs., 3 figs., 2 tabs.

  13. Extraction and isolation of Ovine Pregnancy-Associated Glycoprotein (ovPAG from cotyledon placenta of Garut sheep

    Directory of Open Access Journals (Sweden)

    E.T. Setiatin

    2009-10-01

    Full Text Available Pregnancy-associated glycoprotein (PAG structurally related to aspartic protease, expressed in the outer epithelial cell layer (trophectoderm of ungulate placenta. Ovine PAG (ovPAG synthesized by mono- and binucleic trophoblast before complete implantation at Day 14-15. Of this, ovPAG could be used as a marker for early pregnancy. The objective of study was to extract and isolate PAG from placenta of Garut Sheep collected at term and to characterize their molecular weight. The procedures included extraction of protein at neutral pH (cotyledon was thawed, minced, added PBS, blended and centrifuged, acidic (H3PO41M, pH 4,5; centrifuged and ammonium sulfate (40% and 80% (NH4SO4, centrifuged precipitation; gel filtration (Sephadex-G75, anion exchange chromatography (DEAE- cellulose. Cotyledon extract was subjected to Sephadex-G75 and DEAE cellulose, and their fractions were measured their absorbances. Absorbances of Sephadex-G75 and DEAE fractions at peak were assayed for protein concentration (Bichinconinic protein assay. Continuously, these fractions were subjected to monogel SDS-PAGE and stained by Commassie Brilliant Blue. It was four different molecular weights isolating from cotyledon of Garut Sheep, namely 68.8, 36.04, 32.39 and 12.18 kDa. However, after chromatography anion exchange (DEAE-cellulose, only three bands exist, those were 71,67; 33,64 and 30,86 kDa.

  14. A purification strategy for analysis of the DNA/RNA-associated sub-proteome from chloroplasts of mustard cotyledons

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    Yvonne eSchröter

    2014-10-01

    Full Text Available Plant cotyledons are a tissue that is particularly active in plastid gene expression in order to develop functional chloroplasts from pro-plastids, the plastid precursor stage in plant embryos. Cotyledons, therefore, represent a material being ideal for the study of composition, function and regulation of protein complexes involved in plastid gene expression. Here, we present a pilot study that uses heparin-Sepharose and phospho-cellulose chromatography in combination with isoelectric focussing and denaturing SDS gel electrophoresis (two-dimensional gel electrophoresis for investigating the nucleotide binding proteome of mustard chloroplasts purified from cotyledons. We describe the technical requirements for a highly resolved biochemical purification of several hundreds of protein spots obtained from such samples. Subsequent mass spectrometry of peptides isolated out of cut spots that had been treated with trypsin identified 58 different proteins within 180 distinct spots. Our analyses indicate a high enrichment of proteins involved in transcription and translation and, in addition, the presence of massive post-translational modification of this plastid protein sub-fraction. The study provides an extended catalogue of plastid proteins from mustard being involved in gene expression and its regulation and describes a suitable purification strategy for further analysis of low abundant gene expression related proteins.

  15. Isolation of a putative receptor for KDEL-tailed cysteine proteinase (SH-EP) from cotyledons of Vigna mungo seedlings.

    Science.gov (United States)

    Tsuru-Furuno, A; Okamoto, T; Minamikawa, T

    2001-10-01

    SH-EP is the major papain-type proteinase expressed in cotyledons of germinated Vigna mungo seeds. The proteinase possesses a KDEL sequence at the C-terminus although the mature form of SH-EP is localized in vacuoles. It has also been shown that the proform of SH-EP is accumulated at the edge or middle region of the endoplasmic reticulum, and the accumulated proSH-EP is directly transported to vacuoles via the KDEL-tailed cysteine proteinase-accumulating vesicle, KV. In this study, to address the transport machinery of proSH-EP through KV, putative receptor for proSH-EP was isolated from membrane proteins of cotyledons of V. mungo seedlings using a proSH-EP-immobilized column. The deduced amino acid sequence from cDNA to the protein revealed that the putative receptor for proSH-EP is a member of vacuolar sorting receptor, VSR, that is known to be localized in the Golgi-complex and/or clathrin coated vesicle. We carried out subcellular fractionation of cotyledon cells and subsequently conducted SDS-PAGE/immunoblotting and immunocytochemistry with anti-V. mungo VSR (VmVSR) or SH-EP antibody. The results showed that VmVSR is co-localized in the fraction of the gradient in which KV existed.

  16. Enzymatic characterization of germination-specific cysteine protease-1 expressed transiently in cotyledons during the early phase of germination.

    Science.gov (United States)

    Tsuji, Akihiko; Tsukamoto, Kana; Iwamoto, Keiko; Ito, Yuka; Yuasa, Keizo

    2013-01-01

    Papain-like cysteine protease activity that shows a unique transient expression profile in cotyledons of daikon radish during germination was detected. The enzyme showed a distinct elution pattern on DEAE-cellulose compared with cathepsin B-like and Responsive to dessication-21 cysteine protease. Although this activity was not detected in seed prior to imbibition, the activity increased markedly and reached a maximum at 2 days after imbibition and then decreased rapidly and completely disappeared after 5 days. Using cystatin-Sepharose, the 26 kDa cysteine protease (DRCP26) was isolated from cotyledons at 2 days after imbibition. The deduced amino acid sequence from the cDNA nucleotide sequence indicated that DRCP26 is an orthologue of Arabidopsis unidentified protein, germination-specific cysteine protease-1, belonging to the C1 family of cysteine protease predicted from genetic information. In an effort to characterize the enzymatic properties of DRCP26, the enzyme was purified to homogeneity from cotyledons at 48 h after imbibition. The best synthetic substrate for the enzyme was carbobenzoxy-Phe-Arg-4-methylcoumaryl-7-amide. All model peptides were digested to small peptides by the enzyme, suggesting that DRCP26 possesses broad cleavage specificity. These results indicated that DRCP26 plays a role in the mobilization of storage proteins in the early phase of seed germination.

  17. The development and geometry of shape change in Arabidopsis thaliana cotyledon pavement cells

    Directory of Open Access Journals (Sweden)

    Halsey Leah E

    2011-02-01

    Full Text Available Abstract Background The leaf epidermis is an important architectural control element that influences the growth properties of underlying tissues and the overall form of the organ. In dicots, interdigitated pavement cells are the building blocks of the tissue, and their morphogenesis includes the assembly of specialized cell walls that surround the apical, basal, and lateral (anticlinal cell surfaces. The microtubule and actin cytoskeletons are highly polarized along the cortex of the anticlinal wall; however, the relationships between these arrays and cell morphogenesis are unclear. Results We developed new quantitative tools to compare population-level growth statistics with time-lapse imaging of cotyledon pavement cells in an intact tissue. The analysis revealed alternating waves of lobe initiation and a phase of lateral isotropic expansion that persisted for days. During lateral isotropic diffuse growth, microtubule organization varied greatly between cell surfaces. Parallel microtubule bundles were distributed unevenly along the anticlinal surface, with subsets marking stable cortical domains at cell indentations and others clearly populating the cortex within convex cell protrusions. Conclusions Pavement cell morphogenesis is discontinuous, and includes punctuated phases of lobe initiation and lateral isotropic expansion. In the epidermis, lateral isotropic growth is independent of pavement cell size and shape. Cortical microtubules along the upper cell surface and stable cortical patches of anticlinal microtubules may coordinate the growth behaviors of orthogonal cell walls. This work illustrates the importance of directly linking protein localization data to the growth behavior of leaf epidermal cells.

  18. Hexose-6-kinases in germinating honey locust cotyledons: substrate specificity of D-fructo-6-kinase.

    Science.gov (United States)

    Myers, D; Matheson, N K

    1994-11-01

    Extracts of the cotyledons of germinated honey locust (Gleditsia triacanthos) seeds, which contain galactomannan as a reserve polysaccharide in the endosperm, were fractionated by chromatography and the fractions examined for the presence of a specific manno-6-kinase which could phosphorylate the D-mannose released by hydrolysis of galactomannan. One particulate hexokinase (the major hexose-6-kinase fraction) and two soluble hexokinase fractions (the minor portion), as well as a soluble fructo-6-kinase fraction, were initially separated. From chromatography, electrophoresis and kinetic studies, no evidence for a specific manno-kinase was obtained. This and the level and kinetic behaviour of the particulate hexokinase implicated it as the enzyme catalysing the phosphorylation of released D-mannose. The fructo-kinase activity was further separated into three fractions. Kinetic studies on one of these with native and synthetic substrates indicated that the structural requirements for the monosaccharide substrate were a beta-D-anomeric 2-OH in the furanose ring, a 4-OH trans to the D-5-CH2OH and a -CH2OH substituent on C2 (trans to the 5-CH2OH) which could be modified. The orientation of the hydroxyl on C-3 had only a limited effect.

  19. Cotyledon thermal behavior and pectic solubility as related to cooking quality in common beans.

    Science.gov (United States)

    Bernal-Lugo, I; Parra, C; Portilla, M; Peña-Valdivia, C B; Moreno, E

    1997-01-01

    The characteristic of proteins, starch and pectic substances in cotyledons of two bean cultivars varying in cooking time were determined to investigate their possible contribution to bean cooking quality. Both cultivars showed the same enthalpies of starch gelatinization but different protein denaturation enthalpies. The proportion of hot water soluble pectins was higher in Michigan, the cultivar with the lower cooking time, than in Ojo de Cabra, the cultivar with the higher cooking time. These results were not due to differences in pectin methylation or in the ratio of monovalent to divalent cations in the tissue, suggesting that in fresh beans the beta-elimination reaction is not the sole or predominant route of thermal pectin degradation. Overall, this study indicates that varietal differences in bean cooking quality may be reflections of the rate of pectin loss during soaking/heating and that the thermal properties of starch and protein fractions seem to have a minor contribution. Researchers involved in this study propose that in fresh beans, the thermal pectin loss results from a two step mechanism: pectin enzymic breakdown during the bean soaking followed by thermal solubilization rather than beta-elimination during the bean heating.

  20. Characterization of anisocotylous leaf formation in Streptocarpus wendlandii (Gesneriaceae): significance of plant growth regulators.

    Science.gov (United States)

    Nishii, Kanae; Kuwabara, Asuka; Nagata, Toshiyuki

    2004-09-01

    Unifoliate species of Gesneriaceae are unique, as they bear only one leaf throughout their life history. The development of this leaf (termed a macrocotyledon) derived from one of two cotyledons is intriguing. The other cotyledon does not develop further and is termed a microcotyledon. This process of unequal cotyledon development is termed anisocotyly. In this study the process of macrocotyeldon formation was studied and the effects of plant hormones on the macrocotyledon development were investigated. Streptocarpus wendlandii was chosen as the main subject material, as it was found to be suitable for experimental studies in laboratory conditions. Morphological analyses were carried out with light and scanning electron microscopy. Plant hormones were applied exogenously. The macrocotyledon of S. wendlandii is produced through cell division activity in the basal meristem of the enlarging cotyledon. The newly developed region in the macrocotyledon displayed distinct morphological changes, including the formation of long, needle-shaped trichomes. The newly formed region was surrounded by lateral veins. No such change was observed in the microcotyledon. Furthermore, it was shown that development of anisocotyly is suppressed by the application of cytokinin, resulting in the formation of two nearly equal-sized cotyledons. Both cotyledons displayed macrocotyledon characteristics. This observation in S. wendlandii was confirmed using Monophyllaea glabra, another unifoliate species in the same family. It is proposed that developmental changes of the macrocotyledon have characteristics of a developmental phase-change, and cytokinins may be involved in its formation. These results are discussed in the light of current knowledge of phase-change transitions in plant vegetative development.

  1. Phyllotactic pattern formation in early stages of cactus ontogeny

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    Edyta M. Gola

    2011-01-01

    Full Text Available Representatives of the family Cactaceae are characterized by a wide range of phyllotaxis. To assess the origin of this diversity, early stages of phyllotactic pattern formation were examined in seedlings. The analysis of the sequence of areole initiation revealed intertribal differences. In seedlings from the Trichocereeae (Gymnocalycium, Rebutia and Notocacteae (Parodia tribes, two opposite cotyledonal areoles developed as the first elements of a pattern. Usually, next pair of areoles was initiated perpendicularly to cotyledonal areoles, starting the decussate pattern. This pattern was subsequently transformed into bijugate or into simple spiral phyllotaxis. In seedlings from the Cacteae tribe (Mammillaria and Thelocactus, cotyledonal areoles were never observed and the first areoles always appeared in the space between cotyledons. It was either areole pair (mainly in Mammillaria, starting a decussate pattern, or a single areole (mainly in Thelocactus quickly followed by areoles spirally arranged, usually in accordance with the main Fibonacci phyllotaxis. Differences in the initial stages of pattern formation do not fully explain the phyllotaxis diversity in mature cacti. Only two, the most common phyllotactic patterns occurred in the early development of studied seedlings, i.e. the main Fibonacci and the decussate pattern. Discrepancy in the range of phyllotactic spectra in seedlings and in mature plants suggests that phyllotaxis diversity emerges during further plant growth. Initial phyllotactic transformations, occurring already in the very early stages, indicate great plasticity of cactus growth and seem to support the hypothesis of the ontogenetic increase of phyllotaxis diversity due to transformations.

  2. 草菇菌丝体与原基差异表达基因分析%Analysis of Differentially Expressed Genes between Mycelium and Primordium of Paddy Straw Mushroom (Volvariella volvacea)

    Institute of Scientific and Technical Information of China (English)

    刘朋虎; 邓优锦; 江玉姬; 谢宝贵; 王海英; 章小寅

    2012-01-01

    采用Solexa测序技术,对草菇菌丝体和原基进行了数字基因表达谱(DGE)测序,在菌丝体和原基文库中分别得到5 701 781个和5 659 262个高质量测序标签(clean tags),对应的标签种数(distinct clean tags)分别为85 626和95 363.将所有高质量测序标签与参考基因库进行比对,在菌丝体和原基文库中,占标签种数的43.32%和52.57% 的标签可以唯一定位(map)到参考序列上,占标签种数的21.65%和21.47%的标签可以被定位到基因组序列上.最终,被菌丝体和原基标签唯一定位的基因数(unambiguous tag-mapped genes)分别为14 794和15 534.差异基因分析显示,两个文库中共有显著性差异表达的基因4 163个,其中在原基中上调、下调的基因数分别为2 486和1 677,只在原基中表达的基因321个.经过Blastnr比对,在原基中特异表达的基因,涉及蛋白质(氨基酸)合成与代谢、糖代谢、脂类代谢和抗逆反应等多个代谢途径.GO功能富集分析结果表明,葡萄糖、己糖和乙醇等代谢途径大部分基因下调表达.Pathway功能富集分析结果表明,合成核糖体蛋白的基因均下调表达,表明原基形成时细胞代谢减弱,蛋白质合成量减小.%The expression profiling of mycelium and primordium of Volvariella volvacea was analyzed by using high-throughput sequencing technology based on the Solexa Genome Analyzer platform. Totally 5 701 781 and 5 659 262 clean tags for mycelium and primordium libraries were obtained corresponding to 85 626 and 95 363 distinct clean tags respectively. Comparing all the clean tags with gene bank, in mycelium and primordium libraries, 43.32% and 52.27% of the distinct clean tags were mapped unambiguously to the reference database respectively, and 21.65% and 21.74% of the distinct clean tags were mapped to the genome database of Volvariella volvacea. Finally, 14 794 and 15 534 unambiguous tag-mapped genes were obtained. Analysis of differentially expressed genes

  3. 草菇菌丝体与原基差异表达基因分析%Analysis of Differentially Expressed Genes between Mycelium and Primordium of Paddy Straw Mushroom(Volvariella volvacea)

    Institute of Scientific and Technical Information of China (English)

    刘朋虎; 邓优锦; 江玉姬; 谢宝贵; 王海英; 章小寅

    2012-01-01

    The expression profiling of mycelium and primordium of Volvariella volvacea was analyzed by using high-throughput sequencing technology based on the Solexa Genome Analyzer platform.Totally 5 701 781 and 5 659 262 clean tags for mycelium and primordium libraries were obtained corresponding to 85 626 and 95 363 distinct clean tags respectively.Comparing all the clean tags with gene bank,in mycelium and primordium libraries,43.32% and 52.27% of the distinct clean tags were mapped unambiguously to the reference database respectively,and 21.65% and 21.74% of the distinct clean tags were mapped to the genome database of Volvariella volvacea.Finally,14 794 and 15 534 unambiguous tag-mapped genes were obtained.Analysis of differentially expressed genes shows that there are 4 163 genes differentially expressed between two libraries,and in the primordium library,2 486 of them are up-regulated while 1 677 of them are down-regulated.There are 321 genes that are only expressed in the primordium library.With Blastnr comparison,they are found to be related to protein and amino metabolism,glucose metabolism,lignin and cellulose degradation,lipid metabolism cytoskeleton,and so on.Gene ontology functional enrichment analysis reveals that most genes related to glucose metabolic process,monosaccharide catabolic process,hexose catabolic process,alcohol catabolic process,and glucose metabolic process are down-regulated.Pathway enrichment analysis shows that genes related to ribosome are all down-regulated,and this indicates that when primordium is developed the cell metabolism slows down and the protein synthesis decreases.%采用Solexa测序技术,对草菇菌丝体和原基进行了数字基因表达谱(DGE)测序,在菌丝体和原基文库中分别得到5701781个和5659262个高质量测序标签(cleantags),对应的标签种数(distinct clean tags)分别为85626和95363。将所有高质量测序标签与参考基因库进行比对,在菌丝体和原

  4. New insights on the evolution of Leafy cotyledon1 (LEC1) type genes in vascular plants.

    Science.gov (United States)

    Cagliari, Alexandro; Turchetto-Zolet, Andreia Carina; Korbes, Ana Paula; Maraschin, Felipe Dos Santos; Margis, Rogerio; Margis-Pinheiro, Marcia

    2014-01-01

    NF-Y is a conserved oligomeric transcription factor found in all eukaryotes. In plants, this regulator evolved with a broad diversification of the genes coding for its three subunits (NF-YA, NF-YB and NF-YC). The NF-YB members can be divided into Leafy Cotyledon1 (LEC1) and non-LEC1 types. Here we presented a comparative genomic study using phylogenetic analyses to validate an evolutionary model for the origin of LEC-type genes in plants and their emergence from non-LEC1-type genes. We identified LEC1-type members in all vascular plant genomes, but not in amoebozoa, algae, fungi, metazoa and non-vascular plant representatives, which present exclusively non-LEC1-type genes as constituents of their NF-YB subunits. The non-synonymous to synonymous nucleotide substitution rates (Ka/Ks) between LEC1 and non-LEC1-type genes indicate the presence of positive selection acting on LEC1-type members to the fixation of LEC1-specific amino acid residues. The phylogenetic analyses demonstrated that plant LEC1-type genes are evolutionary divergent from the non-LEC1-type genes of plants, fungi, amoebozoa, algae and animals. Our results point to a scenario in which LEC1-type genes have originated in vascular plants after gene expansion in plants. We suggest that processes of neofunctionalization and/or subfunctionalization were responsible for the emergence of a versatile role for LEC1-type genes in vascular plants, especially in seed plants. LEC1-type genes besides being phylogenetic divergent also present different expression profile when compared with non-LEC1-type genes. Altogether, our data provide new insights about the LEC1 and non-LEC1 evolutionary relationship during the vascular plant evolution.

  5. Purification and characterization of cysteine protease from germinating cotyledons of horse gram

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    Rao Sridhar K

    2009-11-01

    Full Text Available Abstract Background Proteolytic enzymes play central role in the biochemical mechanism of germination and intricately involved in many aspects of plant physiology and development. To study the mechanism of protein mobilization, undertaken the task of purifying and characterizing proteases, which occur transiently in germinating seeds of horse gram. Results Cysteine protease (CPRHG was purified to homogeneity with 118 fold by four step procedure comprising Crude extract, (NH42SO4 fractionation, DEAE-Cellulose and CM-sephacel chromatography from the 2 day germinating cotyledons of horse gram (Macrotyloma uniflorum (Lam. Verdc.. CPRHG is a monomer with molecular mass of 30 k Da, was determined by SDS-PAGE and gel filtration. The purified enzyme on IEF showed two isoforms having pI values of 5.85 and 6.1. CPRHG composed of high content of aspartic acid, glutamic acid and serine. The enzyme activity was completely inhibited by pCMB, iodoacetate and DEPC indicating cysteine and histidine residues at the active site. However, on addition of sulfhydryl reagents (cysteine, dithiothreitol, glutathione and beta-ME reverse the strong inhibition by pCMB. The enzyme is fairly stable toward pH and temperature. Immunoblot analysis shows that the enzyme synthesized as zymogen (preproenzyme with 81 kDa and processed to a 40 kDa proenzyme which was further degraded to give 30 kDa active enzyme. Conclusion It appears that the newly synthesized protease is inactive, and activation takes place during germination. CPRHG has a broad substrate specificity and stability in pH, temperature, etc. therefore, this protease may turn out to be an efficient choice for the pharmaceutical, medicinal, food, and biotechnology industry.

  6. A TGACGT motif in the 5'-upstream region of alpha-amylase gene from Vigna mungo is a cis-element for expression in cotyledons of germinated seeds.

    Science.gov (United States)

    Yamauchi, D

    2001-06-01

    Alpha-amylase is expressed at high levels in cotyledons of germinated seeds of Vigna mungo. The mRNA for alpha-amylase appeared in cotyledons of the seeds at 1 d after imbibition started (DAI). Two TGACGT motifs at -445 and at -125 in the promoter region of the gene interacted with nuclear proteins from cotyledons of dry seeds and the activities were detected until 3 DAI. A transient assay with particle bombardment showed that the downstream region from -135 in the promoter was required for high level expression in the cotyledons and the activity was reduced by mutation of the TGACGT motif at -125. The activities to bind the TGACGT motifs were detected in the axes of the seeds at 1 DAI but disappeared at 4 DAI, although the mRNA for alpha-amylase in the axes appeared at 4 DAI and increased in level by 6 DAI. A transient assay experiment showed that a positive regulatory element for the expression in the axes was located in the region from -630 to -453. These results indicated that the TGACGT motif at -125 was required for high level expression of the gene in the cotyledons of the germinated seeds.

  7. Direct detection of transcription factors in cotyledons during seedling development using sensitive silicon-substrate photonic crystal protein arrays.

    Science.gov (United States)

    Jones, Sarah I; Tan, Yafang; Shamimuzzaman, Md; George, Sherine; Cunningham, Brian T; Vodkin, Lila

    2015-03-01

    Transcription factors control important gene networks, altering the expression of a wide variety of genes, including those of agronomic importance, despite often being expressed at low levels. Detecting transcription factor proteins is difficult, because current high-throughput methods may not be sensitive enough. One-dimensional, silicon-substrate photonic crystal (PC) arrays provide an alternative substrate for printing multiplexed protein microarrays that have greater sensitivity through an increased signal-to-noise ratio of the fluorescent signal compared with performing the same assay upon a traditional aminosilanized glass surface. As a model system to test proof of concept of the silicon-substrate PC arrays to directly detect rare proteins in crude plant extracts, we selected representatives of four different transcription factor families (zinc finger GATA, basic helix-loop-helix, BTF3/NAC [for basic transcription factor of the NAC family], and YABBY) that have increasing transcript levels during the stages of seedling cotyledon development. Antibodies to synthetic peptides representing the transcription factors were printed on both glass slides and silicon-substrate PC slides along with antibodies to abundant cotyledon proteins, seed lectin, and Kunitz trypsin inhibitor. The silicon-substrate PC arrays proved more sensitive than those performed on glass slides, detecting rare proteins that were below background on the glass slides. The zinc finger transcription factor was detected on the PC arrays in crude extracts of all stages of the seedling cotyledons, whereas YABBY seemed to be at the lower limit of their sensitivity. Interestingly, the basic helix-loop-helix and NAC proteins showed developmental profiles consistent with their transcript patterns, indicating proof of concept for detecting these low-abundance proteins in crude extracts.

  8. Salt stress-induced seedling growth inhibition coincides with differential distribution of serotonin and melatonin in sunflower seedling roots and cotyledons.

    Science.gov (United States)

    Mukherjee, Soumya; David, Anisha; Yadav, Sunita; Baluška, František; Bhatla, Satish Chander

    2014-12-01

    Indoleamines regulate a variety of physiological functions during the growth, morphogenesis and stress-induced responses in plants. Present investigations report the effect of NaCl stress on endogenous serotonin and melatonin accumulation and their differential spatial distribution in sunflower (Helianthus annuus) seedling roots and cotyledons using HPLC and immunohistochemical techniques, respectively. Exogenous serotonin and melatonin treatments lead to variable effect on hypocotyl elongation and root growth under NaCl stress. NaCl stress for 48 h increases endogenous serotonin and melatonin content in roots and cotyledons, thus indicating their involvement in salt-induced long distance signaling from roots to cotyledons. Salt stress-induced accumulation of serotonin and melatonin exhibits differential distribution in the vascular bundles and cortex in the differentiating zones of the primary roots, suggesting their compartmentalization in the growing region of roots. Serotonin and melatonin accumulation in oil body rich cells of salt-treated seedling cotyledons correlates with longer retention of oil bodies in the cotyledons. Present investigations indicate the possible role of serotonin and melatonin in regulating root growth during salt stress in sunflower. Effect of exogenous serotonin and melatonin treatments (15 μM) on sunflower seedlings grown in the absence or presence of 120 mM NaCl substantiates their role on seedling growth. Auxin and serotonin biosynthesis are coupled to the common precursor tryptophan. Salt stress-induced root growth inhibition, thus pertains to partial impairment of auxin functions caused by increased serotonin biosynthesis. In seedling cotyledons, NaCl stress modulates the activity of N-acetylserotonin O-methyltransferase (HIOMT; EC 2.1.1.4), the enzyme responsible for melatonin biosynthesis from N-acetylserotonin.

  9. Heat stress, divergent nutrition level, and late pregnancy in hair sheep: effects upon cotyledon development and litter weight at birth.

    Science.gov (United States)

    Meza-Herrera, César Alberto; Vicente-Pérez, Arnulfo; Osorio-Marín, Yolanda; Girón-Gómez, Blenda Sinahí; Beltran-Calderon, Eira; Avendaño-Reyes, Leonel; Correa-Calderon, Abelardo; Macías-Cruz, Ulises

    2015-06-01

    The effect of two divergent nutritional levels during late pregnancy upon some physiological variables and the number (NC) and diameter (DC) of placental cotyledons along with litter weight at birth (LWB) on heat-stressed (42-45 °C) hair ewes was evaluated. Multiparous Katahdin x Pelibuey ewes (n = 24) at the onset of the 3/3 of pregnancy were randomly assigned to two treatments (n = 12): (1) non-nutritionally restricted (NNR) ewes, with free access to wheat straw plus 500 g/day of concentrate, and (2) nutritionally restricted (NR) ewes, receiving only wheat straw ad libitum. On days 100, 115, 130, and 145 of gestation, the body weight (BW), body condition score (BCS), rectal temperature (RT), respiration rate (RR) were registered in the afternoon (15:00) while the temperature-humidity index (THI) was calculated. At lambing, NC, DC, and LWB were also registered. Analyses considered a completely random design (CRD)-ANOVA with repeated measures across time, considering to litter size (LS) as covariable to reduce any possible influence of LS upon the response variables along experimental diets. BW and BCS were higher in NNR ewes at days 115, 130, and 145. Despite RT similarities (P Nutritional supplementation in hair ewes besides to an increase the energy body reserves (BW and BCS) also improved both the number and size of cotyledons, while generated an increased litter weight at birth.

  10. Halting a Wilful Degeneration into the Abyss: Rhapsodizing the Morass of Despair in Esiaba Irobi’s Inflorescence and Cotyledons

    Directory of Open Access Journals (Sweden)

    Niyi Akingbe

    2014-01-01

    Full Text Available An examination of Nigeria’s nationhood in the themes of Inflorescence (1989 and Cotyledons (2009 reveals a dogged inscription of Esiaba Irobi’s poems within the context of Nigeria’s interweaving socio-political tragedies: the rapacious rape of her resources by the successive political class, the continuous violation of her humanistic ethos by the rampaging military institution, and the ignoble dispossession of her hopeless downtrodden masses. Irobi portrays a dialectical juxtaposition of the fragmented and haunted existentialism in Nigeria against the sanity and sanctity for human rights obtainable in the Western nations. The grounding of Nigeria’s disillusionment further underscores Nigeria’s stand on the brink of a political precipice. The paper aims to evaluate how Esiaba Irobi’s Inflorescence and Cotyledons have implicitly challenged Nigeria’s inability to live up to its expectations of fulfilling the present and future aspirations of its teeming population in the areas of  human and infrastructural developments.

  11. Meristem fate and bulbil formation in Titanotrichum (Gesneriaceae).

    Science.gov (United States)

    Wang, Chun-Neng; Cronk, Quentin C B

    2003-12-01

    Titanotrichum oldhamii (a monotypic genus from Taiwan, Okinawa, and adjacent regions of China) has inflorescences bearing either showy yellow flowers or asexual bulbils. Asexual reproduction by bulbils is important in natural populations, and bulbil production increases in August and September at the end of the flowering season (which runs from June to the end of September). The bulbils are small (∼1-2.5 mm long) and numerous. They consist of a small portion of stem (bract-stem) topped by opposite storage bracts that enclose a minute apical meristem. A secondary root develops from the side of the bract-stem. The floral meristem of T. oldhamii has three possible fates: (1) bulbil formation, (2) flower formation, or (3) bracteose proliferation. Bracteose proliferation rarely occurs and appears to be a developmental transition between the bulbiliferous and racemose inflorescence forms. It is strongly reminiscent of the floricaula and squamosa mutants of Antirrhinum. In the bulbiliferous form a single floral primordium, which would normally produce one flower, gives rise to ∼50-70 bulbils by repeated subdivision of the meristem. This form of bulbil production appears to be unique to Titanotrichum. Occasionally a floral meristem divides, but the subdivision forms multiflowered units of up to four flowers rather than bulbils, suggesting that meristem fate is reversible up to the first or second meristem subdivision. In Titanotrichum, therefore, primordium fate is apparently not determined at inception but becomes irreversibly determined shortly after the appearance of developmental characteristics of the floral or bulbil pathway.

  12. Detailed analysis of seed coat and cotyledon reveals molecular understanding of the hard-to-cook defect of common beans (Phaseolus vulgaris L.).

    Science.gov (United States)

    Yi, Jianyong; Njoroge, Daniel M; Sila, Daniel N; Kinyanjui, Peter K; Christiaens, Stefanie; Bi, Jinfeng; Hendrickx, Marc E

    2016-11-01

    The hard-to-cook (HTC) defect in legumes is characterized by the inability of cotyledons to soften during the cooking process. Changes in the non-starch polysaccharides of common bean seed coat and cotyledon were studied before and after development of the HTC defect induced by storage at 35°C and 75% humidity for 8months. Distinct differences in the yields of alcohol insoluble residues, degree of methoxylation (DM), sugar composition, and molar mass distribution of non-starch polysaccharides were found between the seeds coat and cotyledons. The non-starch polysaccharide profiles, both for seed coats and cotyledons, significantly differed when comparing HTC and easy-to-cook (ETC) beans. In conclusion, differences in the structure, composition and extractability of non-starch polysaccharides between the ETC and HTC beans confirmed the significant role of pectin polysaccharides in interaction with divalent ions in the HTC development, which consequently affect their cooking behaviors. Copyright © 2016 Elsevier Ltd. All rights reserved.

  13. Effect of salicylic acid and structurally related compounds in the accumulation of phytoalexins in cotyledons of common bean (Phaseolus vulgaris L.) cultivars.

    Science.gov (United States)

    Durango, Diego; Pulgarin, Natalia; Echeverri, Fernando; Escobar, Gustavo; Quiñones, Winston

    2013-09-02

    In the present work, isoflavonoid phytoalexin production in response to the application of salicylic acid in cotyledons of four common bean (Phaseolus vulgaris) cultivars (SA) was evaluated. The time-course and dose-response profiles of the induction process were established by quantifying the isoflavonoids by HPLC. Cotyledons of anthracnose-resistant cultivars induced by SA produced substantially higher phytoalexin contents as compared to the susceptible ones. In addition, maximum levels of phytoalexins (50-100 fold increases) were reached between 96 and 144 h, and when a concentration of SA from 3.62 to 14.50 mM was used. The observations also indicate that there was a relatively good correlation between the phytoalexin contents and the inhibitory effect against C. lindemuthianum; the higher antifungal activity was observed during the first 48 hours for extracts from cotyledons treated with SA at 1.45 and 3.62 mM, and between 96 and 144 h after induction. Finally, compounds structurally related to SA (dihydro-quinazolinones and some imines) showed a strong elicitor effect. Moreover, induced extracts from cotyledons treated with these potential elicitors, besides the properly elicitors, displayed a weak to moderated antifungal activity. These compounds may be considered good candidates for developing of new phytoprotectants. Furthermore, phytoalexin-eliciting substances may contribute for selecting disease resistant cultivars.

  14. Effect of Salicylic Acid and Structurally Related Compounds in the Accumulation of Phytoalexins in Cotyledons of Common Bean (Phaseolus vulgaris L. Cultivars

    Directory of Open Access Journals (Sweden)

    Winston Quiñones

    2013-09-01

    Full Text Available In the present work, isoflavonoid phytoalexin production in response to the application of salicylic acid in cotyledons of four common bean (Phaseolus vulgaris cultivars (SA was evaluated. The time-course and dose-response profiles of the induction process were established by quantifying the isoflavonoids by HPLC. Cotyledons of anthracnose-resistant cultivars induced by SA produced substantially higher phytoalexin contents as compared to the susceptible ones. In addition, maximum levels of phytoalexins (50–100 fold increases were reached between 96 and 144 h, and when a concentration of SA from 3.62 to 14.50 mM was used. The observations also indicate that there was a relatively good correlation between the phytoalexin contents and the inhibitory effect against C. lindemuthianum; the higher antifungal activity was observed during the first 48 hours for extracts from cotyledons treated with SA at 1.45 and 3.62 mM, and between 96 and 144 h after induction. Finally, compounds structurally related to SA (dihydro-quinazolinones and some imines showed a strong elicitor effect. Moreover, induced extracts from cotyledons treated with these potential elicitors, besides the properly elicitors, displayed a weak to moderated antifungal activity. These compounds may be considered good candidates for developing of new phytoprotectants. Furthermore, phytoalexin-eliciting substances may contribute for selecting disease resistant cultivars.

  15. Phytochrome-mediated induction of phenylalanine ammonia-lyase in the cotyledons of tomato (Lycopersicon esculentum Mill.) plants.

    Science.gov (United States)

    Lercari, B; Sodi, F; Fastami, C

    1982-01-01

    Phenylalanine ammonia-lyase (PAL; EC 4.3.1.5.) induction in cotyledons from 96-h dark-grown Lycopersicon esculentum Mill. was studied in response to continuous light and hourly light pulses (blue, red, far red). The increases of PAL promoted by blue and red pulses are reversed completely by immediately following 758 nm irradiations. The response to continuous red light could be substituted for by hourly 6-min red light pulses. The effect of continuous red treatments is mainly due to a multiple induction effect of phytochrome. In contrast to red light, hourly light pulses with far red and blue, light can only partially substitute for continuous irradiation. The continuous blue response could be due to a combination of a multiple induction response and of a high irradiance response of phytochrome. The continuous far red response, could represent a high irradiance response of phytochrome. Dichromatic irradiations indicate that phytochrome is the photoreceptor controlling the light response (PAL) in tomato seedlings.

  16. Molecular cloning and characterization of ADP-glucose pyrophosphorylase cDNA clones isolated from pea cotyledons.

    Science.gov (United States)

    Burgess, D; Penton, A; Dunsmuir, P; Dooner, H

    1997-02-01

    Three ADP-glucose pyrophosphorylase (ADPG-PPase) cDNA clones have been isolated and characterized from a pea cotyledon cDNA library. Two of these clones (Psagps1 and Psagps2) encode the small subunit of ADPG-PPase. The deduced amino acid sequences for these two clones are 95% identical. Expression of these two genes differs in that the Psagps2 gene shows comparatively higher expression in seeds relative to its expression in other tissues. Psagps2 expression also peaks midway through seed development at a time in which Psagps1 transcripts are still accumulating. The third cDNA isolated (Psagp11) encodes the large subunit of ADPG-PPase. It shows greater selectivity in expression than either of the small subunit clones. It is highly expressed in sink organs (seed, pod, and seed coat) and undetectable in leaves.

  17. MAP-kinase activity in etiolated Cucumis sativus cotyledons: the effect of red and far-red light irradiation.

    Science.gov (United States)

    Alvarez-Flórez, Fagua; Vidal, Dolors; Simón, Esther

    2013-02-01

    Phytochrome (phy) signalling in plants may be transduced through protein phosphorylation. Mitogen-activated protein kinase (MAP-kinase, MAPK) activity and the effect of R (red) and FR (far-red) light irradiation on MAPK activity were studied in etiolated Cucumis sativus L. cotyledons. By in vitro protein phosphorylation and in-gel assays with myelin basic protein (MBP), a protein band (between 48 and 45 kDa) with MAPK-like activity was detected. The addition to the phosphorylation buffer of specific protein phosphatase (PTP) inhibitors (Na(3)VO(4) and NaF) and genistein, apigenin or PD98059 as MAPK inhibitors allowed us to confirm the MAPK activity of the protein band. Irradiation of etiolated cotyledons with FR light for 5, 10 or 60 min rapidly and transiently stimulated the MAPK activity of the protein band. This suggests that there was a very low fluence response (VLFR) of phys. In addition, 15 min of R light irradiation or a sequential treatment of 15 min of R plus 5 min of FR also increased MAPK activity. The stimulatory effect of R light was also attributed to the same photoreceptor, which suggests that MAPKs are involved in phytochrome signal transduction. Protein immunoprecipitation and immunoblotting analysis with the polyclonal antibody anti-pERK1/2 (Tyr 204) and the monoclonal antibody anti-phosphotyrosine PY20 allowed us to recognize the above mentioned protein band as two proteins with molecular masses (M(r)) of approximately 47 and 45 kDa, and MAPK activity. The biochemical and immunological properties showed by the proteins detected indicated that they were members of the MAPK family phosphorylated in tyrosine residues.

  18. In vitro Induction and Proliferation of Callus from Immature Cotyledons and Embryos of Juglans regia cv. 'Xiangling'

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    Xiao-Dong CAI

    2013-12-01

    Full Text Available Callus holds great potential for biotechnology applications in plants. In this study, several experiments were performed to establish a protocol for in vitro induction of good quality callus by using immature cotyledons and embryos of Juglans regia cv. ‘Xiangling’ as the explants. DKW basal media supplemented with different concentrations of plant growth regulators were applied to determine the induction rate, texture and color of the recovered callus. Results showed that the optimum culture medium for the callus induction from these explants was a DKW basal medium consisting of 1 mg/L BA, 2 mg/L KT 250 mg/L glutamine, 500 mg/L casein hydrolysate, 200 mg/L Vc, 50 g/L sucrose and 2.8 g/L Gelrite (i.e., the T8 medium. The average rate of callus induction on the medium reached 80.7% for the immature cotyledons and 66.7% for the immature embryos, and all the callus was characterized by a friable, creamy or yellow appearance. In vitro proliferation of callus was not very successful as a result of the fact that the friable callus with creamy or yellow color grew very slowly, whereas the fast-growing callus was easy to turn brown and died eventually. Even though further investigation will be required to overcome the problem of browning and assess the regeneration ability of the callus, this approach for the production of friable callus may have valuable applications for walnut and other woody trees.

  19. Epithelial topography for repetitive tooth formation

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    Marcia Gaete

    2015-12-01

    Full Text Available During the formation of repetitive ectodermally derived organs such as mammary glands, lateral line and teeth, the tissue primordium iteratively initiates new structures. In the case of successional molar development, new teeth appear sequentially in the posterior region of the jaw from Sox2+ cells in association with the posterior aspect of a pre-existing tooth. The sequence of molar development is well known, however, the epithelial topography involved in the formation of a new tooth is unclear. Here, we have examined the morphology of the molar dental epithelium and its development at different stages in the mouse in vivo and in molar explants. Using regional lineage tracing we show that within the posterior tail of the first molar the primordium for the second and third molar are organized in a row, with the tail remaining in connection with the surface, where a furrow is observed. The morphology and Sox2 expression of the tail retains characteristics reminiscent of the earlier stages of tooth development, such that position along the A-P axes of the tail correlates with different temporal stages. Sox9, a stem/progenitor cell marker in other organs, is expressed mainly in the suprabasal epithelium complementary with Sox2 expression. This Sox2 and Sox9 expressing molar tail contains actively proliferating cells with mitosis following an apico-basal direction. Snail2, a transcription factor implicated in cell migration, is expressed at high levels in the tip of the molar tail while E-cadherin and laminin are decreased. In conclusion, our studies propose a model in which the epithelium of the molar tail can grow by posterior movement of epithelial cells followed by infolding and stratification involving a population of Sox2+/Sox9+ cells.

  20. Hamowanie syntezy chlorofilu i RNA w izolowanych liścieniach ogórka przez N-hydroksymocznik [Inhibition of chlorophyll and RNA synthesis by N-hydroxyurea in detached cucumber cotyledons

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    A. Rennert

    2015-01-01

    Full Text Available N-hydroxyurea (HU at the concentration of 5 x 10-4 M decreased the content of chlorophyll in detached cucumber cotyledons; at this concentration it has no inhibitory effect on growth. Benzylaminopurine, gibberelic acid and KCl partially reversed the inhibitory effect of HU on chlorophyll synthesis. HU stimulated yellowing of barley first leaf sections. The compound had little effect on leucine-14C incorporation to protein, and markedly inhibited uracil-14C incorporation in to RNA of the greening cucumber cotyledons. It is suggested that the inhibition of RNA and chlorophyll synthesis in HU-treated cucumber cotyledons follows the HU-dependent inhibition of DNA replication.

  1. Synchrotron-based microspectroscopic study on the effects of heat treatments on cotyledon tissues in yellow-type canola (Brassica) seeds.

    Science.gov (United States)

    Yu, Peiqiang; Theodoridou, Katerina; Xin, Hangshu; Huang, Pei-Yu; Lee, Yao-Chang; Wood, Bayden R

    2013-07-31

    Synchrotron-based infrared (IR) microspectroscopy is able to reveal structural features of biomaterials within intact tissue at both cellular and molecular levels. Heat-related treatments have been used to improve nutrient availability of canola seeds and meal. However, hitherto, there has been no study on the sensitivity and response of each layer in canola seeds to heat-related treatments. It is not known which layer (epiderm/mucllage, spermoderm, endosperm, or cotyledon) is the most sensitive to heat when heat treatment is applied to the seeds. Traditional wet chemical analysis is unable to answer such questions. The objective of this study is to use synchrotron IR microspectroscopy with multivariate molecular spectral analyses as a research tool to study heat treatment effects in a fast way on the structural changes in cotyledon tissues of yellow-type canola (Brassica) seeds among raw (treatment code "A"), wet heating (autoclaving at 121 °C for 60 min, treatment code "B"), and dry heating (dry roasting at 120 °C for 60 min, treatment code "C"). The hypothesis of this study was that different heat treatments have different heat penetration abilities on cotyledon tissues in yellow-type canola seeds. The multivariate analytical tools principal component analysis (PCA) and agglomerative hierarchal cluster analysis (AHCA) were applied to investigate variance and groupings within the spectral data set [whole spectral range of ca. 4000-650 cm(-1), spectral range of ca. 1300-900 cm(-1) (cellulose or saccarides), spectral range of ca. 1800-1500 cm(-1) (secondary structures of protein) and spectral range of ca. 1500-1300 cm(-1) (bending motion of methylene and methyl group; this change is consistent with the change in the range of ca. 3000-2800 cm(-1))]. The results showed that there were no clear cluster and groups formed in the cotyledon tissues among the three treatments (A, B, and C). There were no clear distinguished responses of the cotyledon tissues to different

  2. Dormancy and Impotency of Cocklebur Seeds: IV. Effects of Gibberellic Acid, Benzyladenine, Thiourea, and Potassium Nitrate on the Growth of Embryonic Axis and Cotyledon Segments.

    Science.gov (United States)

    Esashi, Y; Katoh, H

    1977-02-01

    Germination of nondormant but impotent small cocklebur seeds (Xanthium pennsylvanicum Wallr.) was promoted profoundly with thiourea or benzyladenine, and slightly with gibberellic acid. Gibberellic acid was ineffective in causing the germination of dormant cocklebur seeds, although thiourea and benzyladenine were effective. Experiments with excised seed pieces showed that the promotive effects of thiourea, benzyladenine, and gibberellic acid on cocklebur seed germination were associated with the enhancement of growth of seed parts; thiourea stimulated predominantly the axial growth, whereas benzyladenine stimulated predominantly the cotyledonary growth.Potassium nitrate or indoleacetic acid had little effect on the initial growth of either axes or cotyledons. Except for gibberellic acid, all of the compounds employed enhanced ethylene production, but in general, the ethylene production seemed more likely to be a consequence of growth rather than a cause of it. We concluded that the chemical regulation of seed germination may be a consequence of the alteration of growth capabilities in either the axes or cotyledons, or both.

  3. Effect of polyamines and silver nitrate on the high frequency regeneration from cotyledon explants of bottle gourd (Lagenaria siceraria; sp. asiatica).

    Science.gov (United States)

    Shyamali, Saha; Hattori, Kazumi

    2007-04-15

    In this study, we have investigated the effect ofpolyamines (PA) and silver nitrate (AgNO3) on the high frequency regeneration from cotyledon explants of bottle gourd containing Murashige and Skoog (MS) media supplemented with different kind of Cytokinin alone or in the combination. Synergistic effect of kinetin (1 mg L(-1)) and benzyl adenine (BA) (2 mg L(-1)) itself showed highest shoot regeneration (80.6%) efficiency than BA or Kinetin alone in cotyledon explants of bottle gourd without adding AgNO3 or PAs. We have also observed that PAs and AgNO3 show their sensitivity on the regeneration, which is hormonal dependent. Regenerated shoots were rooted in half strength MS media containing 0.1 mg L(-1) IAA.

  4. Influência da remoção de cotilédones no desenvolvimento de ramificações nas axilas cotiledonares de plântulas de leguminosas Effect of cotyledon removal on cotyledonal axillary shooting in seedlings of leguminosae

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    Odaci Fernandes de Oliveira

    1999-12-01

    Full Text Available Experimentos inteiramente casualizados foram conduzidos em condições de viveiro com o objetivo de verificar a importância da permanência de cotilédones no desenvolvimento de ramificações nas axilas cotiledonares de plântulas de Phaseolus vulgaris L., Vigna unguiculata (L. Walp., Leucaena leucocephala (Lam. De Wit, Prosopis juliflora (Sw., Tamarindus indica L. e Delonix regia L. Os tratamentos foram: remoção de ambos os cotilédones nos primeiro, segundo e terceiro dias da emergência, remoção de um só cotilédone no primeiro dia da emergência e não remoção de cotilédones. A recuperação do desenvolvimento em plântulas de P. vulgaris, avaliada através da ocorrência de ramificações, independe do número de cotilédones removidos no período de um a três dias da emergência, mas é menos eficiente que em V. unguiculata. A remoção de ambos os cotilédones em plântulas de V. unguiculata, no dia da emergência, afetou a recuperação do desenvolvimento dessas plântulas em comparação com os outros tratamentos. Em plântulas de L leucocephala, P. juliflora, T. indica e D. regia, a remoção de ambos os cotilédones, no período de um a três dias da emergência, sugere o aumento de mortalidade nessas plântulas. A remoção de um único cotilédone não afetou significativamente o percentual de sobrevivência das plântulas nem limitou o surgimento de brotações à axila cotiledonar correspondente ao cotilédone removido.Completely randomized experiments under greenhouse conditions were carried to study the role of cotyledons on the cotyledonal axillary shooting of Phaseolus vulgaris L., Vigna unguiculata (L. Walp., Leucaena leucocephala (Lam. De Wit, Prosopis juliflora (Sw., Tamarindus indica L. and Delonix regia L. The seedlings underwent the following treatments: removal of both cotyledons on the first to the third day after emergence, removal of only one cotyledon on the first day of emergence, and no cotyledon

  5. Distribution of the elements in cotyledon, embryonic axis, and testa of peanut seeds obtained by ICP-MS with microwave acid digestion.

    Science.gov (United States)

    Zhu, Yanbei; Hioki, Akiharu; Chiba, Koichi

    2013-01-01

    Eighteen elements in the cotyledon, the embryonic axis, and the testa of peanut seeds were determined by inductively coupled plasma mass spectrometry (ICP-MS) after microwave acid digestion, while the gravimetric standard addition with internal standard was applied for the calibration of the elemental concentrations. The detection limit and the procedure blank value for each element were low enough to ensure the precise analysis of the elements, with a relative expanded uncertainty of less than 5%. The concentrations of the elements in peanut seed samples covered 6 orders of magnitude from approximately 0.01 mg kg(-1) of Co to approximately 7000 mg kg(-1) of K. The correlation coefficient factor was around 0.98 for the elemental concentrations in peanut seeds grown in Japan and those grown in China, indicating a good correlation. Most of the elements distributed in the cotyledon in large amounts because of the cotyledon's relatively high mass fraction. By contrast, Na, Ca, Fe, Co, Ni, Cu, Ga, Sr, Cd, and Ba were apparently enriched in the testa and the relative enrichment factor (REF) values of the elements were over 4. The relative enrichment of Mo, Fe, Zn and other elements was observed in the embryonic axis samples with REF values over 2. The relative enrichment of Cd in the testa of peanut seed indicates that about 15 to 25% of the Cd intake through peanut seeds could be effectively lowered by removal of the testa (roughly 2.5 to 3.5% of the peanut seed).

  6. Identification of genome regions controlling cotyledon, pod wall/seed coat and pod wall resistance to pea weevil through QTL mapping.

    Science.gov (United States)

    Aryamanesh, N; Zeng, Y; Byrne, O; Hardie, D C; Al-Subhi, A M; Khan, T; Siddique, K H M; Yan, G

    2013-11-15

    Pea weevil, Bruchus pisorum, is one of the limiting factors for field pea (Pisum sativum) cultivation in the world with pesticide application the only available method for its control. Resistance to pea weevil has been found in an accession of Pisum fulvum but transfer of this resistance to cultivated pea (P. sativum) is limited due to a lack of easy-to-use techniques for screening interspecific breeding populations. To address this problem, an interspecific population was created from a cross between cultivated field pea and P. fulvum (resistance source). Quantitative trait locus (QTL) mapping was performed to discover the regions associated with resistance to cotyledon, pod wall/seed coat and pod wall resistance. Three major QTLs, located on linkage groups LG2, LG4 and LG5 were found for cotyledon resistance explaining approximately 80 % of the phenotypic variation. Two major QTLs were found for pod wall/seed coat resistance on LG2 and LG5 explaining approximately 70 % of the phenotypic variation. Co-linearity of QTLs for cotyledon and pod wall/seed coat resistance suggested that the mechanism of resistance for these two traits might act through the same pathways. Only one QTL was found for pod wall resistance on LG7 explaining approximately 9 % of the phenotypic variation. This is the first report on the development of QTL markers to probe Pisum germplasm for pea weevil resistance genes. These flanking markers will be useful in accelerating the process of screening when breeding for pea weevil resistance.

  7. Insights into salicylic acid responses in cucumber (Cucumis sativus L.) cotyledons based on a comparative proteomic analysis.

    Science.gov (United States)

    Hao, J H; Dong, C J; Zhang, Z G; Wang, X L; Shang, Q M

    2012-05-01

    To investigate the response of cucumber seedlings to exogenous salicylic acid (SA) and gain a better understanding of SA action mechanism, we generated a proteomic profile of cucumber (Cucumis sativus L.) cotyledons treated with exogenous SA. Analysis of 1500 protein spots from each gel revealed 63 differentially expressed proteins, 59 of which were identified successfully. Of the identified proteins, 97% matched cucumber proteins using a whole cucumber protein database based on the newly completed genome established by our laboratory. The identified proteins were involved in various cellular responses and metabolic processes, including antioxidative reactions, cell defense, photosynthesis, carbohydrate metabolism, respiration and energy homeostasis, protein folding and biosynthesis. The two largest functional categories included proteins involved in antioxidative reactions (23.7%) and photosynthesis (18.6%). Furthermore, the SA-responsive protein interaction network revealed 13 key proteins, suggesting that the expression changes of these proteins could be critical for SA-induced resistance. An analysis of these changes suggested that SA-induced resistance and seedling growth might be regulated in part through pathways involving antioxidative reactions and photosynthesis.

  8. Dynamics and control of phloem loading of indole-3-acetic acid in seedling cotyledons of Ricinus communis.

    Science.gov (United States)

    Tamas, Imre A; Davies, Peter J

    2016-08-01

    During seed germination, sugars and auxin are produced from stored precursors or conjugates respectively, and transported to the seedling axis. To elucidate the mode of travel of indole-3-acetic acid (IAA) into the phloem, a solution of [(3)H]IAA, together with [(14)C]sucrose, was injected into the endosperm cavity harboring the cotyledons of germinating seedlings of Ricinus communis Phloem exudate from the cut hypocotyl was collected and the radioactivity recorded. Sucrose loading into the phloem was inhibited at higher IAA levels, and the rate of filling of the transient pool(s) was reduced by IAA. IAA was detected within 10min, with the concentration increasing over 30min and reaching a steady-state by 60min. The kinetics indicated that phloem loading of IAA involving both an active, carrier-based, and a passive, diffusion-based component, with IAA traveling along a pathway containing an intermediary pool, possibly the protoplasts of mesophyll cells. Phloem loading of IAA was altered by sucrose, K(+), and a range of non-specific and IAA-specific analogs and inhibitors in a manner that showed that IAA moves into the phloem from the extra cotyledonary solution by multiple pathways, with a carrier-mediated pathway playing a principal role.

  9. A novel phytase with sequence similarity to purple acid phosphatases is expressed in cotyledons of germinating soybean seedlings.

    Science.gov (United States)

    Hegeman, C E; Grabau, E A

    2001-08-01

    Phytic acid (myo-inositol hexakisphosphate) is the major storage form of phosphorus in plant seeds. During germination, stored reserves are used as a source of nutrients by the plant seedling. Phytic acid is degraded by the activity of phytases to yield inositol and free phosphate. Due to the lack of phytases in the non-ruminant digestive tract, monogastric animals cannot utilize dietary phytic acid and it is excreted into manure. High phytic acid content in manure results in elevated phosphorus levels in soil and water and accompanying environmental concerns. The use of phytases to degrade seed phytic acid has potential for reducing the negative environmental impact of livestock production. A phytase was purified to electrophoretic homogeneity from cotyledons of germinated soybeans (Glycine max L. Merr.). Peptide sequence data generated from the purified enzyme facilitated the cloning of the phytase sequence (GmPhy) employing a polymerase chain reaction strategy. The introduction of GmPhy into soybean tissue culture resulted in increased phytase activity in transformed cells, which confirmed the identity of the phytase gene. It is surprising that the soybean phytase was unrelated to previously characterized microbial or maize (Zea mays) phytases, which were classified as histidine acid phosphatases. The soybean phytase sequence exhibited a high degree of similarity to purple acid phosphatases, a class of metallophosphoesterases.

  10. Willow seedlings from photooxidized seeds accelerate cotyledon death and anticipate first leaf emergence: a histological and biochemical study following germination.

    Science.gov (United States)

    Roqueiro, Gonzalo; Causin, Fabio; Olle-Resa, Carolina; Maroder, Horacio; Maldonado, Sara

    2013-10-01

    In willow seeds, photooxidative damage is mainly restricted to the outer cotyledonary tissues, significantly reducing normal germination. Here we analyzed the damage generated in cotyledonary tissues and investigated whether the increase in reactive oxygen species (ROS) generation in seedlings from photooxidized seeds can affect the morphogenetic capacity of the shoot apical meristem. Seeds were photooxidized under different light intensities and the evolution of the damage during seedling growth was studied by light and transmission electron microscopies. The level of lipid peroxidation and changes in antioxidant capacity were measured following the time course of superoxide dismutase, catalase, ascorbate peroxidase and guaiacol peroxidase enzyme activities, and the effect of photooxidative stress on the genesis of new leaf primordia and lateral roots was examined. Early and active endocytosis and autophagy, changes in chloroplast morphology, as well as the accumulation and diffusion of ROS all play important roles in the early cell death observed in cotyledonary tissues. Following germination, seedlings from photooxidized seeds anticipated the emergence of first leaves, which complemented the altered functionality of the damaged cotyledons. © 2013 Scandinavian Plant Physiology Society.

  11. Dynamics and control of phloem loading of indole-3-acetic acid in seedling cotyledons of Ricinus communis

    Science.gov (United States)

    Tamas, Imre A.; Davies, Peter J.

    2016-01-01

    During seed germination, sugars and auxin are produced from stored precursors or conjugates respectively, and transported to the seedling axis. To elucidate the mode of travel of indole-3-acetic acid (IAA) into the phloem, a solution of [3H]IAA, together with [14C]sucrose, was injected into the endosperm cavity harboring the cotyledons of germinating seedlings of Ricinus communis. Phloem exudate from the cut hypocotyl was collected and the radioactivity recorded. Sucrose loading into the phloem was inhibited at higher IAA levels, and the rate of filling of the transient pool(s) was reduced by IAA. IAA was detected within 10min, with the concentration increasing over 30min and reaching a steady-state by 60min. The kinetics indicated that phloem loading of IAA involving both an active, carrier-based, and a passive, diffusion-based component, with IAA traveling along a pathway containing an intermediary pool, possibly the protoplasts of mesophyll cells. Phloem loading of IAA was altered by sucrose, K+, and a range of non-specific and IAA-specific analogs and inhibitors in a manner that showed that IAA moves into the phloem from the extra cotyledonary solution by multiple pathways, with a carrier-mediated pathway playing a principal role. PMID:27371947

  12. Purification, molecular cloning and functional characterization of flavonoid C-glucosyltransferases from Fagopyrum esculentum M. (buckwheat) cotyledon.

    Science.gov (United States)

    Nagatomo, Yoshihisa; Usui, Shiori; Ito, Takamitsu; Kato, Akira; Shimosaka, Makoto; Taguchi, Goro

    2014-11-01

    C-Glycosides are characterized by their C-C bonds in which the anomeric carbon of the sugar moieties is directly bound to the carbon atom of aglycon. C-Glycosides are remarkably stable, as their C-C bonds are resistant to glycosidase or acid hydrolysis. A variety of plant species are known to accumulate C-glycosylflavonoids; however, the genes encoding for enzymes that catalyze C-glycosylation of flavonoids have been identified only from Oryza sativa (rice) and Zea mays (maize), and have not been identified from dicot plants. In this study, we identified the C-glucosyltransferase gene from the dicot plant Fagopyrum esculentum M. (buckwheat). We purified two isozymes from buckwheat seedlings that catalyze C-glucosylation of 2-hydroxyflavanones, which are expressed specifically in the cotyledon during seed germination. Following purification we isolated the cDNA corresponding to each isozyme [FeCGTa (UGT708C1) and FeCGTb (UGT708C2)]. When expressed in Escherichia coli, both proteins demonstrated C-glucosylation activity towards 2-hydroxyflavanones, dihydrochalcone, trihydroxyacetophenones and other related compounds with chemical structures similar to 2',4',6'-trihydroxyacetophenone. Molecular phylogenetic analysis of plant glycosyltransferases shows that flavonoid C-glycosyltransferases form a different clade with other functionally analyzed plant glycosyltransferases.

  13. Transglutaminases and their substrates in kinetin-stimulated etioplast-to-chloroplast transformation in cucumber cotyledons.

    Science.gov (United States)

    Sobieszczuk-Nowicka, Ewa; Krzesłowska, Magdalena; Legocka, Jolanta

    2008-11-01

    In the light of our previous work, we know that there is a relationship between bound polyamines and the chloroplast differentiation process. This relationship may represent an important component of the process and be part of the mechanism of kinetin action, which stimulates chloroplast differentiation. To clarify the nature of the binding of polyamines to chloroplast structures, the possible involvement of transglutaminases in kinetin-stimulated chloroplast photodevelopment was investigated. Immunodetection of transglutaminases revealed bands at 77, 50 and 30 kDa both in etioplasts and chloroplasts. The data indicated a positive correlation between enzyme level and activity. It also demonstrated the regulation of transglutaminase protein expression by kinetin. The suborganellar location of transglutaminases by electron microscopy showed that the enzyme is peculiarly localised, mainly in pro-thylakoids and appressed grana thylakoids. The data corroborated that spermidine post-translational modification of certain plastid proteins of 58, 29, 26 and 12 kDa occurred. The results we obtained suggest that transglutaminases take part in the formation of the chloroplast structure via a mechanism whereby polyamines bind to their protein substrates. These findings about the effect of kinetin on conjugation provide a new contribution to the understanding of the mechanism of kinetin action on etioplast-to chloroplast transformation.

  14. Induction of 33-kD and 60-kD peroxidases during ethylene-induced senescence of cucumber cotyledons. [Cucumis sativus L

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    Abeles, F.B.; Dunn, L.J.; Morgens, P.; Callahan, A.; Dinterman, R.E.; Schmidt, J. (Appalachian Fruit Research Station, Kearneysville, WV (USA) Army Medical Research Institute for Infectious Diseases, Frederick, MD (USA))

    1988-07-01

    Ethylene enhanced the senescence of cucumber (Cucumis sativus L. cv Poinsett 76) cotyledons. The effect of 10 microliters per liter ethylene was inhibited by 1 millimolar silver thiosulfate, an inhibitor of ethylene action. An increase in proteins with molecular weights of 33 to 30 kilodaltons and lower molecular weights (25, 23, 20, 16, 12 and 10 kilodaltons) were observed in sodium dodecyl sulfate-polyacrylamide gel electrophoresis gels after ethylene enhanced senescence. The measurement of DNase and RNase activity in gels indicated that these new proteins were not nucleases. Two proteins from ethylene-treated cotyledons were purified on the basis of their association with a red chromaphore and subsequently were identified as peroxidases. The molecular weights and isoelectric points (pI) of two of these peroxidases were 33 kilodaltons (cationic, pI = 8.9) and 60 kilodaltons (anionic, pI = 4.0). The observation that ({sup 35}S)Na{sub 2}SO{sub 4} was incorporated into these proteins during ethylene-enhanced senescence suggests that these peroxidases represent newly synthesized proteins. Antibodies to the 33-kilodalton peroxidase precipitated two in vitro translation products from RNA isolated from ethylene-treated but not from control cucumber seedlings. This indicates that the increase in 33-kilodalton peroxidase activity represents de novo protein synthesis. Both forms of peroxidase degraded chlorophyll in vitro, which is consistent with the hypothesis that peroxidases have catabolic or scavenging functions in senescent tissues.

  15. Screening and Validation of Housekeeping Genes of the Root and Cotyledon of Cunninghamia lanceolata under Abiotic Stresses by Using Quantitative Real-Time PCR

    Directory of Open Access Journals (Sweden)

    Wenlong Bao

    2016-07-01

    Full Text Available Cunninghamia lanceolata (Chinese fir is a fast-growing and commercially important conifer of the Cupressaceae family. Due to the unavailability of complete genome sequences and relatively poor genetic background information of the Chinese fir, it is necessary to identify and analyze the expression levels of suitable housekeeping genes (HKGs as internal reference for precise analysis. Based on the results of database analysis and transcriptome sequencing, we have chosen five candidate HKGs (Actin, GAPDH, EF1a, 18S rRNA, and UBQ with conservative sequences in the Chinese fir and related species for quantitative analysis. The expression levels of these HKGs in roots and cotyledons under five different abiotic stresses in different time intervals were measured by qRT-PCR. The data were statistically analyzed using the following algorithms: NormFinder, BestKeeper, and geNorm. Finally, RankAggreg was applied to merge the sequences generated from three programs and rank these according to consensus sequences. The expression levels of these HKGs showed variable stabilities under different abiotic stresses. Among these, Actin was the most stable internal control in root, and GAPDH was the most stable housekeeping gene in cotyledon. We have also described an experimental procedure for selecting HKGs based on the de novo sequencing database of other non-model plants.

  16. Methyl jasmonate is a more effective senescence-promoting factor in Cucurbita pepo (zucchini) cotyledons when compared with darkness at the early stage of senescence.

    Science.gov (United States)

    Ananieva, Kalina; Ananiev, Evgueni D; Mishev, Kiril; Georgieva, Katya; Malbeck, Jiri; Kamínek, Miroslav; Van Staden, Johannes

    2007-09-01

    The effects of short-term darkening and methyl jasmonate (MeJA) on cotyledon senescence were studied 24h after transfer of intact 7-day-old Cucurbita pepo (zucchini) seedlings to darkness or spraying with 100 microM MeJA. The jasmonate inhibitory effect on chlorophyll content and chloroplast transcriptional activity was stronger compared with darkness. Further, MeJA reduced the photosynthetic rate whereas darkness did not affect photosynthesis. Neither stress factor affected the photochemical quantum efficiency of photosystem II (PSII) estimated by the variable fluorescence (F(v))/maximal fluorescence (F(m)) ratio, suggesting the existence of mechanisms protecting the functional activity of PSII at earlier stages of senescence, thus making this parameter more stable compared to others used to quantify senescence. Both stress factors caused a decrease in the content of physiologically active cytokinins, especially trans-zeatin (Z), with the jasmonate effect being much more pronounced when compared to darkness. Our results indicate that MeJA is a more potent inducer of senescence in zucchini cotyledons, at least within the relatively short period of the 24h treatment. This is likely due to its stronger down-regulatory effect on the levels of physiologically active cytokinins.

  17. Induction of shoot buds, multiplication and plantlet formation in seedling explants of bell pepper (Capsicum annuum L. cv. Bryza in vitro

    Directory of Open Access Journals (Sweden)

    Andrzej Gatz

    2014-01-01

    Full Text Available In vitro shoot bud induction and multiplication as well as plantlets formation from different parts of 21-d old seedlings (shoot tip, cotyledonary node, distal part of cotyledon, acropetal section of hypocotyl of Capsicum annuum L., cv. Bryza were compared. During 4 weeks of primary explant culture on initiation media, first shoot bud primordia appeared; they reminded leaf primordia and subsequently some of them underwent enlargement, some developed into leaves and leaf-like structures (mainly on cotyledon explants. The highest number of shoot bud primordia was noted on cotyledonary node explants, but they were smaller than those on the remaining types of the explants. The best response of shoot regeneration showed cotyledon explants on which most of shoot buds were formed in each from four treated passages. From shoot buds on elongation media after 4 weeks of culture rooted rosettes of leaves were achieved, and the extension of the culture time to eight weeks without subculture caused that the rosettes developed into plantlets. Throughout four successive passages plantlets were obtained from cotyledon and shoot tip explants.

  18. Organogênese direta de explantes cotiledonares e regeneração de plantas de mogango Direct organogenesis of cotyledon explants and plant regeneration of squash

    Directory of Open Access Journals (Sweden)

    André Luís Lopes da Silva

    2006-06-01

    Full Text Available Os objetivos foram induzir a organogênese direta de explantes cotiledonares de mogango e estudar a regeneração de plântulas completas a partir das brotações adventícias. Foram utilizados cotilédones como explantes, originados das plântulas de mogango com 20 dias após a semeadura. O meio basal utilizado foi o MS (MURASHIGE & SKOOG, 1962 suplementado com 30g L-1 de sacarose e 7g L-1 de agar. Foram testadas as concentrações de 6-benzilaminopurina (BAP de 0; 0,5; 1,0 e 2,0mg L-1. Explantes de ápices caulinares e segmentos nodais de brotações adventícias foram então cultivados em meio MS suplementado com 30g L-1 de sacarose e 7g L-1 de agar. Maiores concentrações de BAP no meio MS promoveram um aumento da percentagem de explantes cotiledonares com brotações adventícias e uma redução da percentagem de enraizamento. Explantes de segmentos nodais e ápices caulinares oriundos de brotações adventícias cresceram e enraizaram em meio MS sem reguladores de crescimento. Altas percentagens de enraizamento dependem do tamanho dos explantes utilizados.The objectives were to induce direct organogenesis of squash cotyledons and to study the regeneration of complete plantlets from adventitious shoot. Cotyledon explants of 20-day seedlings were cultured in MS (MURASHIGE & SKOOG, 1962 medium supplemented with 30g L-1 of sucrose and 7g L-1 of agar. The 6-benzilaminopurina (BAP concentrations of 0, 0.5, 1.0 and 2.0mg L-1 were tested. Apical and nodal explants from adventitious shoots were transferred to MS medium supplemented with 30g L-1 of sucrose and 7g L-1 of agar. Increasing BAP concentrations in the MS medium enhance the percentage of adventitious shoot and reduce the percentage of root organogenesis of squash cotyledon explants. Apical and nodal explants from adventitious shoot regenerated plantlets with roots in MS medium without growth regulators. High percentage of plantlet rooting depends upon the size of the explants.

  19. Darkness affects differentially the expression of plastid-encoded genes and delays the senescence-induced down-regulation of chloroplast transcription in cotyledons of Cucurbita pepo L. (Zucchini).

    Science.gov (United States)

    Mishev, Kiril; Dimitrova, Anna; Ananiev, Evguéni D

    2011-01-01

    In contrast to differentiated leaves, the regulatory mechanisms of chloroplast gene expression in darkened cotyledons have not been elucidated. Although some results have been reported indicating accelerated senescence in Arabidopsis upon reillumination, the capacity of cotyledons to recover after dark stress remains unclear. We analysed the effect of two-days dark stress, applied locally or at the whole-plant level, on plastid gene expression in zucchini cotyledons. Our results showed that in the dark the overall chloroplast transcription rate was much more inhibited than the nuclear run-on transcription. While the activities of the plastid-encoded RNA polymerase (PEP) and nuclear RNA polymerase II were strongly reduced, the activities of the nuclear-encoded plastid RNA polymerase (NEP) and nuclear RNA polymerase I were less affected. During recovery upon reillumination, chloroplast transcription in the cotyledons was strongly stimulated (3-fold) compared with the naturally senescing controls, suggesting delayed senescence. Northern blot and dot blot analyses of the expression of key chloroplast-encoded photosynthetic genes showed that in contrast to psbA, which remained almost unaffected, both the transcription rate and mRNA content of psaB and rbcL were substantially decreased.

  20. Study on Methods of Total RNA Extraction from Cotyledon of Chinese Chestnut%板栗子叶总RNA提取方法研究

    Institute of Scientific and Technical Information of China (English)

    王滨蔚; 车鹏燕; 何承忠; 王猛; 石卓功

    2012-01-01

    为了获得板栗子叶总RNA提取的理想方法,为后续的分子生物学研究打下基础,以板栗幼果子叶为材料,采用改良CTAB法、硼砂-CTAB法、酚-SDS法、皂土法和2种植物总RNA提取试剂盒共6种方法提取板栗子叶总RNA.结果表明,除硼砂-CTAB法外,其他5种方法均能获得板栗子叶总RNA.但是,与酚-SDS法、皂土法和2种植物总RNA提取试剂盒相比较,改良CTAB法提取的板栗子叶总RNA完整性好,纯度高,且无DNA污染,能够满足cDNA-AFLP等分子生物学研究的要求.%In order to obtain an ideal total RNA extraction method of cotyledon in Chinese chestnuts for providing foundation for molecular biology research, total RNA of cotyledon excised from young fruit of Chinese chestnut were extracted with 6 methods, including improved CTAB method, borax-CTAB method, phenol-SDS method, bentonite method and 2 RNA extraction kits. The results showed that total RNA was obtained with 5 methods but borax-CTAB method. However, the improved CTAB method was better than phenol-SDS method, bentonite method and two RNA extraction kits. The total RNA extracted with improved CTAB method had high integrity, high purity and no DNA pollution, and would be suitable for related molecular researches, such as cDNA-AFLP markers.

  1. 抗生素对番茄子叶愈伤组织诱导的影响%Effect of Antibiotics on Differentiation of Tomato Cotyledons

    Institute of Scientific and Technical Information of China (English)

    胡金朝; 盖中朝; 裴冬丽

    2012-01-01

      以番茄子叶为外植体,将其接种在含不同种类和浓度的抗生素培养基上进行培养,研究卡那霉素(Kna)、潮霉素(Hyg)以及羧苄青霉素(Carb)对番茄子叶愈伤组织诱导的影响。研究结果表明:卡那霉素、潮霉素以及羧苄青霉素对番茄子叶愈伤组织的分化均有一定的抑制作用。随着三种抗生素浓度的提高,番茄子叶愈伤组织的分化频率逐渐降低,当Hyg达到20 mg/L时,完全抑制愈伤组织诱导产生芽;与Hyg相比,Kan的抑制作用相对弱一些,Carb的抑制作用最弱。%  The cotyledons of tomato were used as explants for tissue culture on the medium with different antibiotics to study the effect of Kna (kanamycin) ,Hyg (Hygromycin) and Carb (Carbenicilin) on their callus induction. The results showed that Kna、Hyg and Carb had inhibited the differentiation of the cotyledons of tomato. With the higher concentration of the antibiotics, the callus induction rates were reduced. When Hyg concentration was 20 mg/L, there was no shoots regenerated. Compared with Hyg, the inhibition effects of Kna were not more obvious on callus differentiation, the inhibition effects of Carb were the lowest.

  2. Regulations on growth and development in tomato cotyledon, flower and fruit via destruction of miR396 with short tandem target mimic.

    Science.gov (United States)

    Cao, Dongyan; Wang, Jiao; Ju, Zheng; Liu, Qingqing; Li, Shan; Tian, Huiqin; Fu, Daqi; Zhu, Hongliang; Luo, Yunbo; Zhu, Benzhong

    2016-06-01

    Despite many studies about functions of miR396 were concentrated on cotyledon and leaf growth and development, only few researches were focused on flower and fruit, especially for fleshy fruit, for example, tomato fruit. Here, the roles of miR396 throughout the growth and development of tomato plant were explored with combining bioinformatics and transgene-mediated methods. In tomato, miR396 had two mature types (miR396a and miR396b), and miR396a expressed significantly higher than miR396b in cotyledon, flower, sepal and fruit. Generally, plant growth and development were regulated by miR396 via growth-regulating factors (GRFs). In tomato, all 13 SlGRFs were analyzed comprehensively, including phylogeny, domain and expression patterns. To investigate the roles of miR396 further, STTM396a/396a-88 was over-expressed in tomato, which induced miR396a and miR396b both dramatical down-regulation, and the target GRFs general up-regulation. As a result, the flowers, sepals and fruits all obviously became bigger. Most significantly, the sepal length of transgenic lines #3 and #4 at 39 days post-anthesis was separately increased 75% and 81%, and the fruit weight was added 45% and 39%, respectively. Overall, these results revealed novel roles of miR396 in regulating flower and fruit development, and provided a new potential way for improving tomato fruit yield.

  3. Measurement and Identification of NADPH : Protochlorophyllide Oxidoreductase Solubilized with Triton X-100 from Etioplast Membranes of Squash Cotyledons

    OpenAIRE

    Masahiko, IKEUCHI; Satoru, Murakami; Department of Biology, College of General Education, University of Tokyo

    1982-01-01

    Etioplast membranes were solubilized with 1 mM Triton X-100 in the presence of excess NADPH and protochlorophyllide to isolate NADPH:protochlorophyllide oxidoreductase. The activity of this reductase was assayed as the formation of chlorophyllide by a single flash and was equivalent to the amount of photoactive protochlorophyllide-NADPH-enzyme complex present before illumination. The rate of regeneration of the phtoactive complex was estimated from the time course of chlorophyllide formation ...

  4. Heterologous Expression of Panax ginseng PgTIP1 Confers Enhanced Salt Tolerance of Soybean Cotyledon Hairy Roots, Composite, and Whole Plants

    Directory of Open Access Journals (Sweden)

    Jing An

    2017-07-01

    Full Text Available The Panax ginseng TIP gene PgTIP1 was previously demonstrated to have high water channel activity by its heterologous expression in Xenopus laevis oocytes and in yeast; it also plays a significant role in growth of PgTIP1-transgenic Arabidopsis plants under favorable conditions and has enhanced tolerance toward salt and drought treatment. In this work, we first investigated the physiological effects of heterologous PgTIP1 expression in soybean cotyledon hairy roots or composite plants mediated by Agrobacterium rhizogenes toward enhanced salt tolerance. The PgTIP1-transgenic soybean plants mediated by the pollen tube pathway, represented by the lines N and J11, were analyzed at the physiological and molecular levels for enhanced salt tolerance. The results showed that in terms of root-specific heterologous expression, the PgTIP1-transformed soybean cotyledon hairy roots or composite plants displayed superior salt tolerance compared to the empty vector-transformed ones according to the mitigatory effects of hairy root growth reduction, drop in leaf RWC, and rise in REL under salt stress. Additionally, declines in K+ content, increases in Na+ content and Na+/K+ ratios in the hairy roots, stems, or leaves were effectively alleviated by PgTIP1-transformation, particularly the stems and leaves of composite soybean plants. At the whole plant level, PgTIP1-trasgenic soybean lines were found to possess stronger root vigor, reduced root and leaf cell membrane damage, increased SOD, POD, CAT, and APX activities, steadily increased leaf Tr, RWC, and Pn values, and smaller declines in chlorophyll and carotenoid content when exposed to salt stress compared to wild type. Moreover, the distribution patterns of Na+, K+, and Cl- in the roots, stems, and leaves of salt-stressed transgenic plants were readjusted, in that the absorbed Na+ and Cl- were mainly restricted to the roots to reduce their transport to the shoots, and the transport of root-absorbed K+ to the

  5. Effect of Injury to Cotyledon on the Later Period Growth and Development of Vigna unguiculata%子叶损伤对豇豆生长发育的影响

    Institute of Scientific and Technical Information of China (English)

    梁成亮; 戴思慧; 吴艺飞; 巢娟; 肖杰

    2013-01-01

    分别剪去豇豆幼苗1/2片子叶、1片子叶、2×1/2片子叶、1+1/2片子叶、2片子叶,以不剪子叶为对照,研究子叶损伤对豇豆生长发育的影响.结果显示:处理后,植株生育期推迟,真叶变短,始花节位数下降,茎变细,豆荚变短增粗,产量降低10%以上,无论春季还是秋季,子叶损失率与产量都有极显著的直线回归关系.%The cotyledon was damaged in the initial period with cutting 25%,50%,25% +25%,25% +50%,100%,and with cutting 0% as CK to investigate the effect of injury to cotyledon on the later period growth and development of cowpea.The results showed that,when cowpea lost the cotyledon,the period of bearing delayed,the position where the beginning flower dropped,stem turned thin,the bean-pod turned thick and short,yield reduced by 10 percent.the percentage of cotyledon' s losing rate and the output had remarkable relationship no matter cowpea was planted in spring or autumn.

  6. The regulation of the fatty-acid composition of the triacylglycerols in microsomal preparations from avocado mesocarp and the developing cotyledons of safflower.

    Science.gov (United States)

    Stobart, A K; Stymne, S

    1985-01-01

    The utilisation of [(14)C]glycerol 3-phosphate and [(14)C]linoleoyl-CoA in the synthesis of triacylglycerol has been studied in the microsomal preparations of developing cotyledons of safflower seed. The results confirm that the glycerol backbone, which flows towards triacylglycerol from phosphatidic acid through the Kennedy pathway, can enter phosphatidylcholine from diacylglycerol. The equilibration between diacylglycerol and phosphatidylcholine offers a mechanism for the return of oleate to phosphatidylcholine for desaturation to linoleate. We have established that the oleate entering position 1 of sn-phosphatidylcholine from diacylglycerol is desaturated in situ to linoleate. The results indicate that the diacylglycerol phosphatidylcholine interconvertion coupled to the acyl exchange between acyl-CoA and position 2 of sn-phosphatidylcholine brings about the continuous enrichment of the glycerol backbone with C18-polyunsaturated fatty acids and hence these enzymes are of major importance in regulating the acyl quality of the accumulating triacylglycerols. Microsomal preparations from avocado mesocarp, however, did not have detectable acyl exchange between acyl-CoA and phosphatidylcholine or diacylglycerol phosphatidylcholine interconversion despite the high activity of the enzymes of the Kennedy pathway. A scheme is presented which incorporates many of the observations on triacylglycerol synthesis and provides a working model for the regulation of acyl quality in linoleate-rich vegetable oils.

  7. Co-localization of putative calcium channels (phenylalkylamine-binding sites) on oil bodies in protoplasts from dark-grown sunflower seedling cotyledons.

    Science.gov (United States)

    Vandana, Shweta; Bhatla, Satish C

    2009-07-01

    Oil bodies are spherical entities containing a triacylglycerol (TAG) matrix encased by a phospholipid monolayer, which is stabilized by oil body-specific proteins, principally oleosins. Biochemical investigations in the recent past have also demonstrated the expression of calcium-binding proteins, called caleosins, as a component of oil body membranes during seed germination. Using DM-Bodipy-phenylalkylamine (PAA; a fluorescent derivative of phenylalkylamine)-a fluorescent probe known to bind L-type calcium channel proteins, present investigations provide the first report on the localization and preferential accumulation of putative calcium channel proteins on/around oil bodies during peak lipolytic phase in protoplasts derived from dark-grown sunflower (Helianthus annuus L. cv Morden) seedling cotyledons. Specificity of DM-Bodipy-PAA labeling was confirmed by using bepridil, a non-fluorescent competitor of PAA while non-specific dye accumulation has been ruled out by using Bodipy-FL as control. Co-localization of fluorescence from DM-Bodipy-PAA binding sites (ex: 504 nm; em: 511 nm) and nile red fluorescing oil bodies (ex: 552 nm; em: 636 nm) has been undertaken by epifluorescence and confocal laser scanning microscopy (CLSM). It revealed the affinity of PAA-sensitive ion channels for the oil body surface. Findings from the current investigations highlight the significance of calcium and calcium channel proteins during oil body mobilization in sunflower.

  8. Plant regeneration from pulse-treated longitudinally sliced half cotyledon node explants of Turkish ochrus chickling [Lathyrus ochrus (L. D.C.

    Directory of Open Access Journals (Sweden)

    Saglam S.

    2012-01-01

    Full Text Available The forage legume ochrus chickling [Lathyrus ochrus (L. D.C.] which is distributed in the Mediterranean region, is gaining importance in terms of economy and agriculture in Turkey. However, the full potential of the legume has yet to be realized due to the presence of neurotoxin, β-N-oxalyl-L-a, β-diaminopropionic acid (ODAP causing lathyrism. This study aimed to develop an efficient micropropagation system using longitudinally sliced cotyledon node explants for use in Agrobacterium-mediated genetic transformation in the future. The results show that the maximum number of shoots per explant was achieved on MS medium solidified with 8 g/l isubgol gelled medium containing 0.30 mg/l BA-0.2 mg/l NAA. Well-developed shoots were rooted by pulse treatment with 50 mg/l IBA and culturing on an 8 g/l isubgol gel solidified MS medium. The results showed 60% rooting in the treated shoots. The rooted plantlets were transferred to pots containing sand and organic matter and acclimatized.

  9. Enhanced seed oil production in canola by conditional expression of Brassica napus LEAFY COTYLEDON1 and LEC1-LIKE in developing seeds.

    Science.gov (United States)

    Tan, Helin; Yang, Xiaohui; Zhang, Fengxia; Zheng, Xiu; Qu, Cunmin; Mu, Jinye; Fu, Fuyou; Li, Jiana; Guan, Rongzhan; Zhang, Hongsheng; Wang, Guodong; Zuo, Jianru

    2011-07-01

    The seed oil content in oilseed crops is a major selection trait to breeders. In Arabidopsis (Arabidopsis thaliana), LEAFY COTYLEDON1 (LEC1) and LEC1-LIKE (L1L) are key regulators of fatty acid biosynthesis. Overexpression of AtLEC1 and its orthologs in canola (Brassica napus), BnLEC1 and BnL1L, causes an increased fatty acid level in transgenic Arabidopsis plants, which, however, also show severe developmental abnormalities. Here, we use truncated napin A promoters, which retain the seed-specific expression pattern but with a reduced expression level, to drive the expression of BnLEC1 and BnL1L in transgenic canola. Conditional expression of BnLEC1 and BnL1L increases the seed oil content by 2% to 20% and has no detrimental effects on major agronomic traits. In the transgenic canola, expression of a subset of genes involved in fatty acid biosynthesis and glycolysis is up-regulated in developing seeds. Moreover, the BnLEC1 transgene enhances the expression of several genes involved in Suc synthesis and transport in developing seeds and the silique wall. Consistently, the accumulation of Suc and Fru is increased in developing seeds of the transgenic rapeseed, suggesting the increased carbon flux to fatty acid biosynthesis. These results demonstrate that BnLEC1 and BnL1L are reliable targets for genetic improvement of rapeseed in seed oil production.

  10. Early changes in membrane permeability, production of oxidative burst and modification of PAL activity induced by ergosterol in cotyledons of Mimosa pudica.

    Science.gov (United States)

    Rossard, Stéphanie; Luini, Estelle; Pérault, Jean-Michel; Bonmort, Janine; Roblin, Gabriel

    2006-01-01

    Ergosterol (a fungal membrane component) was shown to induce transient influx of protons and membrane hyperpolarization in cotyledonary cells of Mimosa pudica L. By contrast, chitosan (a fungal wall component with known elicitor properties) triggered membrane depolarization. In the processes induced by ergosterol, a specific desensitization was observed, since cells did not react to a second ergosterol application but did respond to a chitosan treatment. This comparative study correspondingly shows that ergosterol and chitosan were perceived in a distinct manner by plant cells. Generation of O2*-, visualized by infiltration with nitroblue tetrazolium, was displayed in organs treated with ergosterol and chitosan. This AOS production was preceded by an increase in activity of NADPH oxidase measured in protein extracts of treated cotyledons. In all the previously described processes, cholesterol had no effect, thereby indicating that ergosterol specifically induced these physiological changes known to participate in the reaction chain activated by characteristic elicitors. Contrary to chitosan, ergosterol did not greatly activate secondary metabolism as shown by the small change in content of free phenolics and by the low modification in activity of PAL, the key enzyme of this metabolic pathway. Therefore, future studies have to clarify the signalling cascade triggered by ergosterol recognition.

  11. A new high-frequency Agrobacterium-mediated transformation technique for Sesamum indicum L. using de-embryonated cotyledon as explant.

    Science.gov (United States)

    Chowdhury, Supriyo; Basu, Arpita; Kundu, Surekha

    2014-09-01

    In spite of the economic importance of sesame (Sesamum indicum L.) and the recent availability of its genome sequence, a high-frequency transformation protocol is still not available. The only two existing Agrobacterium-mediated transformation protocols that are available have poor transformation efficiencies of less than 2%. In the present study, we report a high-frequency, simple, and reproducible transformation protocol for sesame. Transformation was done using de-embryonated cotyledons via somatic embryogenic stages. All the critical parameters of transformation, like incubation period of explants in pre-regeneration medium prior to infection by Agrobacterium tumefaciens, cocultivation period, concentrations of acetosyringone in cocultivation medium, kanamycin concentration, and concentration of plant hormones, including 6-benzylaminopurine, have been optimized. This protocol is superior to the two existing protocols in its high regeneration and transformation efficiencies. The transformed sesame lines have been tested by PCR, RT-PCR for neomycin phosphotransferase II gene expression, and β-glucuronidase (GUS) assay. The regeneration frequency and transformation efficiency are 57.33 and 42.66%, respectively. T0 and T1 generation transgenic plants were analyzed, and several T1 plants homozygous for the transgenes were obtained.

  12. New insights into somatic embryogenesis: leafy cotyledon1, baby boom1 and WUSCHEL-related homeobox4 are epigenetically regulated in Coffea canephora.

    Directory of Open Access Journals (Sweden)

    Geovanny I Nic-Can

    Full Text Available Plant cells have the capacity to generate a new plant without egg fertilization by a process known as somatic embryogenesis (SE, in which differentiated somatic cells can form somatic embryos able to generate a functional plant. Although there have been advances in understanding the genetic basis of SE, the epigenetic mechanism that regulates this process is still unknown. Here, we show that the embryogenic development of Coffea canephora proceeds through a crosstalk between DNA methylation and histone modifications during the earliest embryogenic stages of SE. We found that low levels of DNA methylation, histone H3 lysine 9 dimethylation (H3K9me2 and H3K27me3 change according to embryo development. Moreover, the expression of LEAFY cotyledon1 (LEC1 and BABY BOOM1 (BBM1 are only observed after SE induction, whereas WUSCHEL-related homeobox4 (WOX4 decreases its expression during embryo maturation. Using a pharmacological approach, it was found that 5-Azacytidine strongly inhibits the embryogenic response by decreasing both DNA methylation and gene expression of LEC1 and BBM1. Therefore, in order to know whether these genes were epigenetically regulated, we used Chromatin Immunoprecipitation (ChIP assays. It was found that WOX4 is regulated by the repressive mark H3K9me2, while LEC1 and BBM1 are epigenetically regulated by H3K27me3. We conclude that epigenetic regulation plays an important role during somatic embryogenic development, and a molecular mechanism for SE is proposed.

  13. Photocontrol of the Accumulation of Plastid Polypeptides during Greening of Tomato Cotyledons : Potentiation by a Pulse of Red Light.

    Science.gov (United States)

    Pauncz, Y; Gepstein, S; Horwitz, B A

    1992-12-01

    A pulse of red light acting through phytochrome accelerates the formation of chlorophyll upon subsequent transfer of dark-grown seedlings to continuous white light. Specific antibodies were used to follow the accumulation of representative subunits of the major photosynthetic complexes during greening of seedlings of tomato (Lycopersicon esculentum). The time course for accumulation of the various subunits was compared in seedlings that received a red light pulse 4 h prior to transfer to continuous white light and parallel controls that did not receive a red light pulse. The light-harvesting chlorophyll-binding proteins of photosystem II (LHC II), the 33-kD extrinsic polypeptide of the oxygen-evolving complex (OEC1), and subunit II of photosystem I (psaD gene product) all increased in the light, and did so much faster in seedlings that received the inductive red light pulse. The red light pulse had no significant effect on the abundance of the small subunit of ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco), nor on several plastid-encoded polypeptides: the large subunit of Rubisco, the beta subunit of the CF(1) complex of plastid ATPase, and the 43- and 47-kD subunits of photosystem II (CP43, CP47). Subunits I (cytochrome b(6)f) and III (Rieske Fe-S protein) of the cytochrome b(6)f complex showed a small or no increase as a result of the red pulse. The potentiation of greening by a pulse of red light, therefore, is not expressed uniformly in the abundance of all the photosynthetic complexes and their subunits.

  14. Molecular Mapping of D1, D2 and ms5 Revealed Linkage between the Cotyledon Color Locus D2 and the Male-Sterile Locus ms5 in Soybean

    Directory of Open Access Journals (Sweden)

    Alina Ott

    2013-07-01

    Full Text Available In soybean, genic male sterility can be utilized as a tool to develop hybrid seed. Several male-sterile, female-fertile mutants have been identified in soybean. The male-sterile, female-fertile ms5 mutant was selected after fast neutron irradiation. Male-sterility due to ms5 was associated with the “stay-green” cotyledon color mutation. The cotyledon color trait in soybean is controlled by two loci, D1 and D2. Association between cotyledon color and male-sterility can be instrumental in early phenotypic selection of sterility for hybrid seed production. The use of such selection methods saves time, money, and space, as fewer seeds need to be planted and screened for sterility. The objectives of this study were to compare anther development between male-fertile and male-sterile plants, to investigate the possible linkages among the Ms5, D1 and D2 loci, and to determine if any of the d1 or d2 mutations can be applied in hybrid seed production. The cytological analysis during anther development displayed optically clear, disintegrating microspores and enlarged, engorged pollen in the male-sterile, female-fertile ms5ms5 plants, a common characteristic of male-sterile mutants. The D1 locus was mapped to molecular linkage group (MLG D1a and was flanked by Satt408 and BARCSOYSSR_01_1622. The ms5 and D2 loci were mapped to MLG B1 with a genetic distance ~12.8 cM between them. These results suggest that use of the d2 mutant in the selection of male-sterile line may attenuate the cost hybrid seed production in soybean.

  15. Establishment of High-frequency Regeneration System from Cotyledons with Petiole in Radish%萝卜带柄子叶高频再生体系的建立

    Institute of Scientific and Technical Information of China (English)

    李海萍; 张鲁刚; 张静; 茹磊; 刘学成; 孙希禄

    2011-01-01

    以11份萝卜(Raphanus sativus)基因型为材料进行子叶离体培养研究,筛选出具有较高再生率的基因型进行实验,考察基因型、外植体类型、激素配比和苗龄等因素对萝卜再生的影响.结果表明:萝卜离体再生的最佳外植体为全子叶-叶柄,最适苗龄为4天,最适培养基为MS+6 mg·L-16-BA+0.05 mg·L-1NAA,再生率高达86.95%,再生系数为1.80.该研究为进行萝卜遗传转化实验奠定了良好基础.%We studied in vitro culture regeneration from cotyledons of 11 genotypes of radish. Those genotypes, which have a high rate of regeneration, were used as the test materials for subsequent experiments of explant type, hormone ratio, and seedling age. The regenerated plantlets, which generated roots well, were transplanted into the field. The entire cotyledon with a petiole is the optimal regeneration explant. Four days of seedling age is suitable to induce adventitious shoots. The maximum frequency of shoot regeneration was 86.95% obtained from cotyledons of Z3 in the medium Murishige and Skoog + 6 mg·L-1 6-BA + 0.05 mg·L-1 NAA, and the regeneration coefficient reached 1.80. These results set the basis for radish genetic transformation.

  16. 辣椒胞质雄性不育系(CMS)子叶培养植株再生%In vitro Plant Regeneration of Pepper Cytoplasmic Male Sterility (CMS) Lines via Cotyledon Culture

    Institute of Scientific and Technical Information of China (English)

    邓明华; 文锦芬; 邹学校

    2009-01-01

    An in vitro shoot regeneration procedure was developed in pepper (Capsicum annuum L.) cytoplasmic male sterility (CMS) lines 9704A and 8214A using cotyledon as explant. The callus and bud cluster derived from cotyledon tissue explants were proliferated on Murashige and Skoog (MS) medium supplemented with different combinations of 6-benzladenine (6-BA), indole-3-acetic acid (IAA), gibberellic acid (GA3) and silver nitrate (AgNO3). From the formula of MS appended with 5.0 mg/L 6-BA, 1.0 mg/L IAA and 5.0 mg/L AgNO3, for the explants callus and bud cluster, the maximum differentiation rates (respectively 100.0% and 58.3%) and average number of adventitious bud from each explant (respectively 18.8 and 13.2) were obtained. The optimum medium combination for the elongation of adventitious bud was determined to be: MS+ 3.0 mg/L 6-BA + 1.0 mg/L IAA+ 5.0 mg/L AgNO3+ 2.0 mg/L GA3, from which the elongation rates of buds from callus and bud cluster were both 100%, and the average number of per explant adventitious bud number reached 6.3 and 5.8, respectively. And all the elongated shoots were successfully rooted on half-strength MS medium supplemented with 0.3-0.5 mg/L IAA.

  17. SHOOT MERISTEMLESS trafficking controls axillary meristem formation, meristem size and organ boundaries in Arabidopsis.

    Science.gov (United States)

    Balkunde, Rachappa; Kitagawa, Munenori; Xu, Xianfeng Morgan; Wang, Jing; Jackson, David

    2017-05-01

    The shoot stem cell niche, contained within the shoot apical meristem (SAM) is maintained in Arabidopsis by the homeodomain protein SHOOT MERISTEMLESS (STM). STM is a mobile protein that traffics cell-to-cell, presumably through plasmodesmata. In maize, the STM homolog KNOTTED1 shows clear differences between mRNA and protein localization domains in the SAM. However, the STM mRNA and protein localization domains are not obviously different in Arabidopsis, and the functional relevance of STM mobility is unknown. Using a non-mobile version of STM (2xNLS-YFP-STM), we show that STM mobility is required to suppress axillary meristem formation during embryogenesis, to maintain meristem size, and to precisely specify organ boundaries throughout development. STM and organ boundary genes CUP SHAPED COTYLEDON1 (CUC1), CUC2 and CUC3 regulate each other during embryogenesis to establish the embryonic SAM and to specify cotyledon boundaries, and STM controls CUC expression post-embryonically at organ boundary domains. We show that organ boundary specification by correct spatial expression of CUC genes requires STM mobility in the meristem. Our data suggest that STM mobility is critical for its normal function in shoot stem cell control. © 2017 The Authors The Plant Journal © 2017 John Wiley & Sons Ltd.

  18. Dynamic Change of Stomata in Cotyledon and Lower Hypocotyl of Capsicum annuum L.%气孔在辣椒(Capsicum annuum L.)子叶和下胚轴上的动态变化

    Institute of Scientific and Technical Information of China (English)

    董慧峰; 王永飞

    2011-01-01

    The dynamic changes of stomatal density and epidermal cell density in adaxial and abaxial surface of cotyledon and upper and lower of lower hypocotyl during the development of Capsicum annuum L. were investigated. The results showed that: ( 1 ) The guard cells of stomata of Capsicum annuum L. were kidney-shape, without subsidiary cells. Epidermal cells in cotyledon were usually irregular in shape, but epidermal cells in hypocotyl were retangle or ellipse. (2)Stomatal density and epidermal cell density in the adaxial and abaxial surface of cotyledon were the highest at 6 th day and 3 th day after germination, respectively, then decreased gradually. Furthermore, the stomatal density and epidermal cell density in the abaxial epidermis was distinctly higher than that of the adaxial epidermis. (3) Stomatal density in I cm of upper and lower of lower hypocotyl did not change perspicuously, while epidermal cell density decreased gradually. The stomata density and epidermal cell density in the upper of lower hypocotyl was distinctly higher than that of the lower.%以辣椒幼苗(Capsicum annuum L.)为材料,研究了辣椒生长发育过程中子叶的上、下表皮和下胚轴上、下端1cm处的气孔密度及表皮细胞密度的动态变化.结果表明:(1)辣椒的气孔由肾形保卫细胞组成,无副卫细胞;子叶的表皮细胞呈无规则形,下胚轴的表皮细胞呈长方形或椭圆形;(2)辣椒子叶上、下表皮的气孔密度和表皮细胞密度分别在辣椒种子出芽后第6天和第3天达到最大,之后随子叶的生长逐渐减小,下表皮的气孔密度和表皮细胞密度明显大于上表皮的;(3)辣椒下胚轴上、下端1cm处的气孔密度随下胚轴的生长变化不明显,但是表皮细胞密度随下胚轴的生长逐渐减小,下胚轴上端的气孔密度和表皮细胞密度明显的大于下胚轴下端的.

  19. Indução de fitoalexinas em cotilédones de soja em resposta a derivados de folhas de pitangueira Induction of phytoalexins in cotyledons of soybean in response to the derivatives of leaf surinan cherry

    Directory of Open Access Journals (Sweden)

    Sergio Miguel Mazaro

    2008-10-01

    Full Text Available A demanda mundial por alimentos isentos de agrotóxicos tem impulsionado a pesquisa para a busca de métodos alternativos ao controle de patógenos em plantas. A ativação dos mecanismos de defesa com o uso de indutores vem demonstrando ser uma alternativa viável e promissora. O uso de extratos de plantas medicinais tem demonstrado capacidade para induzir a produção de fitoalexinas, como um mecanismo de defesa em plantas tratadas. O objetivo deste trabalho foi verificar o potencial da planta Eugenia uniflora L. (pitangueira em induzir fitoalexinas em cotilédones de soja (Glycine max. Os derivados de extrato alcoólico, infusão, maceração e decocção, obtidos de folhas de pitangueira, foram usados nas concentrações de 0,1; 1; 10 e 40%, além de óleo essencial. Água foi utilizada como controle e quitosana (1% como indutor de referência. Os preparados de pitangueira apresentaram capacidade de indução das fitoalexinas gliceolinas em cotilédones de soja, respondendo ao aumento das concentrações dos preparados. O óleo essencial apresentou destacável efeito na indução de fitoalexinas, sendo superior aos demais preparados. Quitosana induziu fitoalexinas em cotilédones de soja e pode ser utilizado em estudos similares como um indutor de referência.The worldwide demand for food without pesticides has stimulated the research on alternative methods to control pathogens in plants. The activation of defense mechanisms by inductors seems a viable and promising alternative. The use of medicinal plants extracts has demonstrated capacity to induce the production of phytoalexins, as a mechanism of defense in treated plants. The objective of this research was to verify the potential of Eugenia uniflora L. (surinan cherry to induce phytoalexins in cotyledons of soybean (Glycine max. The derivatives alcoholic extract, infusion, maceration and decoction, obtained of surinan cherry were used in the concentrations of 0.1; 1; 10 and 40%, beyond

  20. 豇豆子叶节再生体系建立及Pti4基因的遗传转化%Establishment of Regeneration System of Cotyledon Node and Genetic Transformation ofPti4 Gene to Cowpea

    Institute of Scientific and Technical Information of China (English)

    姜建业; 谢永东; 王一鸣; 赵丽; 铁曼曼; 唐懿

    2015-01-01

    为获得豇豆(Vigna unguiculata)遗传转化体系,以‘成豇七号’带1片子叶的子叶节作为外植体,对其高效再生体系和农杆菌介导抗病基因Pti4的遗传转化进行了研究。结果表明,豇豆无菌苗、不定芽诱导和不定芽伸长培养的最适培养基分别为MSB5+6-BA 3.0 mg L–1、MSB5+6-BA 1.0 mg L–1+ KT 0.06 mg L–1和MSB5+6-BA 0.5 mg L–1+ IBA 0.2 mg L–1。不定芽在MS培养基上能迅速诱导生根,获得完整植株。以豇豆子叶节为受体,通过农杆菌介导成功将Pti4整合到‘成豇七号’抗性芽基因组中。因此,豇豆高效再生体系的建立为遗传育种研究奠定了基础。%In order to obtain genetic transformation system of cowpea (Vigna unguiculata), its cotyledon nodes with one cotyledon of ‘Chengjiang 7’ was used as explants, the regeneration system andPti4 genetic transformation system byAgrobacterium-medium were studied. The results showed that the optimum mediums for aseptic seedling, adventitious bud introduction and adventitious bud elongation were MSB5 + 6-BA 3.0 mg L–1, MSB5 + 6-BA 1.0 mg L–1 + KT 0.06 mg L–1 and MSB5 + 6-BA 0.5 mg L–1 + IBA 0.2 mg L–1, respectively. Adventitious buds could rapidly rooting on MS medium to obtain full plantlets. The cotyledon node was used as receptor, thepit4 gene mediated byAgrobacterium was successfully transformed into the genome of resistant buds of ‘Chengjiang 7’. Therefore, the establishment of high efifcient regeneration system for cowpea laid basis for studying on genetic transformation.

  1. In site bioimaging of hydrogen sulfide uncovers its pivotal role in regulating nitric oxide-induced lateral root formation.

    Directory of Open Access Journals (Sweden)

    Yan-Jun Li

    Full Text Available Hydrogen sulfide (H2S is an important gasotransmitter in mammals. Despite physiological changes induced by exogenous H2S donor NaHS to plants, whether and how H2S works as a true cellular signal in plants need to be examined. A self-developed specific fluorescent probe (WSP-1 was applied to track endogenous H2S in tomato (Solanum lycopersicum roots in site. Bioimaging combined with pharmacological and biochemical approaches were used to investigate the cross-talk among H2S, nitric oxide (NO, and Ca(2+ in regulating lateral root formation. Endogenous H2S accumulation was clearly associated with primordium initiation and lateral root emergence. NO donor SNP stimulated the generation of endogenous H2S and the expression of the gene coding for the enzyme responsible for endogenous H2S synthesis. Scavenging H2S or inhibiting H2S synthesis partially blocked SNP-induced lateral root formation and the expression of lateral root-related genes. The stimulatory effect of SNP on Ca(2+ accumulation and CaM1 (calmodulin 1 expression could be abolished by inhibiting H2S synthesis. Ca(2+ chelator or Ca(2+ channel blocker attenuated NaHS-induced lateral root formation. Our study confirmed the role of H2S as a cellular signal in plants being a mediator between NO and Ca(2+ in regulating lateral root formation.

  2. MAB4-induced auxin sink generates local auxin gradients in Arabidopsis organ formation.

    Science.gov (United States)

    Furutani, Masahiko; Nakano, Yasukazu; Tasaka, Masao

    2014-01-21

    In Arabidopsis, leaves and flowers form cyclically in the shoot meristem periphery and are triggered by local accumulations of the plant hormone auxin. Auxin maxima are established by the auxin efflux carrier PIN-formed1 (PIN1). During organ formation, two distinct types of PIN1 polarization occur. First, convergence of PIN1 polarity in the surface of the meristem creates local auxin peaks. Second, basipetal PIN1 polarization causes auxin to move away from the surface in the middle of an incipient organ primordium, thought to contribute to vascular formation. Several mathematical models have been developed in attempts to explain the PIN1 localization pattern. However, the molecular mechanisms that control these dynamic changes are unknown. Here, we show that loss-of-function in the MACCHI-BOU 4 (MAB4) family genes, which encode nonphototropic hypocotyl 3-like proteins and regulate PIN endocytosis, cause deletion of basipetal PIN1 polarization, resulting in extensive auxin accumulation all over the meristem surface from lack of a sink for auxin. These results indicate that the MAB4 family genes establish inward auxin transport from the L1 surface of incipient organ primordia by basipetal PIN1 polarization, and that this behavior is essential for the progression of organ development. Furthermore, the expression of the MAB4 family genes depends on auxin response. Our results define two distinct molecular mechanisms for PIN1 polarization during organ development and indicate that an auxin response triggers the switching between these two mechanisms.

  3. Gibberellins regulate lateral root formation in Populus through interactions with auxin and other hormones.

    Science.gov (United States)

    Gou, Jiqing; Strauss, Steven H; Tsai, Chung Jui; Fang, Kai; Chen, Yiru; Jiang, Xiangning; Busov, Victor B

    2010-03-01

    The role of gibberellins (GAs) in regulation of lateral root development is poorly understood. We show that GA-deficient (35S:PcGA2ox1) and GA-insensitive (35S:rgl1) transgenic Populus exhibited increased lateral root proliferation and elongation under in vitro and greenhouse conditions, and these effects were reversed by exogenous GA treatment. In addition, RNA interference suppression of two poplar GA 2-oxidases predominantly expressed in roots also decreased lateral root formation. GAs negatively affected lateral root formation by inhibiting lateral root primordium initiation. A whole-genome microarray analysis of root development in GA-modified transgenic plants revealed 2069 genes with significantly altered expression. The expression of 1178 genes, including genes that promote cell proliferation, growth, and cell wall loosening, corresponded to the phenotypic severity of the root traits when transgenic events with differential phenotypic expression were compared. The array data and direct hormone measurements suggested crosstalk of GA signaling with other hormone pathways, including auxin and abscisic acid. Transgenic modification of a differentially expressed gene encoding an auxin efflux carrier suggests that GA modulation of lateral root development is at least partly imparted by polar auxin transport modification. These results suggest a mechanism for GA-regulated modulation of lateral root proliferation associated with regulation of plant allometry during the stress response.

  4. Regulation of male sex determination: genital ridge formation and Sry activation in mice.

    Science.gov (United States)

    Tanaka, Satomi S; Nishinakamura, Ryuichi

    2014-12-01

    Sex determination is essential for the sexual reproduction to generate the next generation by the formation of functional male or female gametes. In mammals, primary sex determination is commenced by the presence or absence of the Y chromosome, which controls the fate of the gonadal primordium. The somatic precursor of gonads, the genital ridge is formed at the mid-gestation stage and gives rise to one of two organs, a testis or an ovary. The fate of the genital ridge, which is governed by the differentiation of somatic cells into Sertoli cells in the testes or granulosa cells in the ovaries, further determines the sex of an individual and their germ cells. Mutation studies in human patients with disorders of sex development and mouse models have revealed factors that are involved in mammalian sex determination. In most of mammals, a single genetic trigger, the Y-linked gene Sry (sex determination region on Y chromosome), regulates testicular differentiation. Despite identification of Sry in 1990, precise mechanisms underlying the sex determination of bipotential genital ridges are still largely unknown. Here, we review the recent progress that has provided new insights into the mechanisms underlying genital ridge formation as well as the regulation of Sry expression and its functions in male sex determination of mice.

  5. Techniques for inducing matured embryo cotyledons of hawthorn to regenerate adventitious plants%诱导山楂子叶产生不定植株的技术研究

    Institute of Scientific and Technical Information of China (English)

    孙清荣; 石荫坪; 张力思

    2000-01-01

    Studies with cotyledons of matured embryos of hawthorn cultivar "Small Golden Star" showed that the factors affecting shoot regeneration were light > auxin > cytokinin > sucrose. The optimum conditions for cotyledons to regenerateadventitious plants were BA 3~5mg/L + NAA 0.1~0.2mg/L + 3% sucrose + dark culture for 3 weeks. For root induction, it would be best when the explant was cultured on 1/2 MS added with IBA 0.3mg/L + 2% sucrose in the dark for 1 week, then exposed to light.%以小金星山楂子叶为外植体,研究了光、细胞分裂索、生长素及蔗糖4个因素对子叶再生不定梢的影响。其影响大小顺序为光>生长素>细胞分裂素>蔗糖。认为山楂胚子叶再生不定植株的最佳条件应当是暗处理3周+BA 3~5mg/L+NAA 0.1~0.2mg/L+蔗糖4%。生根培养基为1/2 MS+IBA 0·3mg/L+蔗糖2%,先暗培养1周,再转到光下培养。

  6. Galaxy formation

    CERN Document Server

    Silk, Joseph; Dvorkin, Irina

    2015-01-01

    Galaxy formation is at the forefront of observation and theory in cosmology. An improved understanding is essential for improving our knowledge both of the cosmological parameters, of the contents of the universe, and of our origins. In these lectures intended for graduate students, galaxy formation theory is reviewed and confronted with recent observational issues. In Lecture 1, the following topics are presented: star formation considerations, including IMF, star formation efficiency and star formation rate, the origin of the galaxy luminosity function, and feedback in dwarf galaxies. In Lecture 2, we describe formation of disks and massive spheroids, including the growth of supermassive black holes, negative feedback in spheroids, the AGN-star formation connection, star formation rates at high redshift and the baryon fraction in galaxies.

  7. Soil formation.

    NARCIS (Netherlands)

    Breemen, van N.; Buurman, P.

    1998-01-01

    Soil Formation deals with qualitative and quantitative aspects of soil formation (or pedogenesis) and the underlying chemical, biological, and physical processes. The starting point of the text is the process - and not soil classification. Effects of weathering and new formation of minerals, mobilis

  8. Transcriptional, post-transcriptional and post-translational regulations of gene expression during leaf polarity formation

    Institute of Scientific and Technical Information of China (English)

    Lin Xu; Li Yang; Hai Huang

    2007-01-01

    Leaf morphogenesis requires the establishment of adaxial-abaxial polarity after primordium initiation from the shoot apical meristem (SAM). Several families of transcription factors are known to play critical roles in promoting adaxial or abaxial leaf fate. Recently, post-transcriptional gene silencing pathways have been shown to regulate the establishment of leaf polarity, providing novel and exciting insights into leaf development. For example, microRNAs (miR165/166)and a trans-acting siRNA (TAS3-derived tasiR-ARF) have been shown to repress the expression of several key transcription factor genes. In addition, yet another level of regulation, post-translational regulation, has been revealed recently by studies on the role of the 26S proteasome in leaf polarity. Although our understanding regarding the molecular mechanisms underlying establishment of adaxial-abaxial polarity has greatly improved, there is still much that remains elusive.This review aims to discuss recent progress, as well as the remaining questions, regarding the molecular mechanisms underlying leaf polarity formation.

  9. Endocytic Trafficking towards the Vacuole Plays a Key Role in the Auxin Receptor SCFTIR-Independent Mechanism of Lateral Root Formation in A.thaliana

    Institute of Scientific and Technical Information of China (English)

    Patricio Pérez-Henríquez; Natasha V.Raikhel; Lorena Norambuena

    2012-01-01

    Plants' developmental plasticity plays a pivotal role in responding to environmental conditions.One of the most plastic plant organs is the root system.Different environmental stimuli such as nutrients and water deficiency may induce lateral root formation to compensate for a low level of water and/or nutrients.It has been shown that the hormone auxin tunes lateral root development and components for its signaling pathway have been identified.Using chemical biology,we discovered an Arabidopsis thaliana lateral root formation mechanism that is independent of the auxin receptor SCFTIR.The bioactive compound Sortin2 increased lateral root occurrence by acting upstream from the morphological marker of lateral root primordium formation,the mitotic activity.The compound did not display auxin activity.At the cellular level,Sortin2 accelerated endosomal trafficking,resulting in increased trafficking of plasma membrane recycling proteins to the vacuole.Sortin2 affected Late endosome/PVC/MVB trafficking and morphology.Combining Sortin2 with well-known drugs showed that endocytic trafficking of Late E/PVC/MVB towards the vacuole is pivotal for Sortin2induced SCFTIR-independent lateral root initiation.Our results revealed a distinctive role for endosomal trafficking in the promotion of lateral root formation via a process that does not rely on the auxin receptor complex SCFTIR.

  10. Galaxy Formation

    DEFF Research Database (Denmark)

    Sparre, Martin

    Galaxy formation is an enormously complex discipline due to the many physical processes that play a role in shaping galaxies. The objective of this thesis is to study galaxy formation with two different approaches: First, numerical simulations are used to study the structure of dark matter and how...... galaxies form stars throughout the history of the Universe, and secondly it is shown that observations of gamma-ray bursts (GRBs) can be used to probe galaxies with active star formation in the early Universe. A conclusion from the hydrodynamical simulations is that the galaxies from the stateof......-the-art cosmological simulation, Illustris, follow a tight relation between star formation rate and stellar mass. This relation agrees well with the observed relation at a redshift of z = 0 and z = 4, but at intermediate redshifts of z ' 2 the normalisation is lower than in real observations. This is highlighted...

  11. Galaxy Formation

    DEFF Research Database (Denmark)

    Sparre, Martin

    galaxies form stars throughout the history of the Universe, and secondly it is shown that observations of gamma-ray bursts (GRBs) can be used to probe galaxies with active star formation in the early Universe. A conclusion from the hydrodynamical simulations is that the galaxies from the stateof......-the-art cosmological simulation, Illustris, follow a tight relation between star formation rate and stellar mass. This relation agrees well with the observed relation at a redshift of z = 0 and z = 4, but at intermediate redshifts of z ' 2 the normalisation is lower than in real observations. This is highlighted...... of GRB host galaxies is affected by the fact that GRBs appear mainly to happen in low-metallicity galaxies. Solving this problem will make it possible to derive the total cosmic star formation rate more reliably from number counts of GRBs....

  12. Hippocampal formation

    NARCIS (Netherlands)

    Cappaert, N.L.M.; van Strien, N.M.; Witter, M.P.; Paxinos, G.

    2015-01-01

    The hippocampal formation and parahippocampal region are prominent components of the rat nervous system and play a crucial role in learning, memory, and spatial navigation. Many new details regarding the entorhinal cortex have been discovered since the previous edition, and the growing interest in t

  13. Callus formation and plant regeneration from protoplasts of sunflower calli and hypocotyls

    Directory of Open Access Journals (Sweden)

    Conceição Santos

    2014-02-01

    Full Text Available Sunflower (cv. Girapac SH222 protoplasts were obtained from 4-7 day-old hypocotyls and cotyledons and from two-month old calli. Higher yields of protoplasts were achieved with medium El (KCl 25g dm-3, CaCl2 2g dm-3, MES 0.7 g• dm-3, pH 5.5 and the combination of Driselase Fluka 0.2%, Macerozyme Onozuka 0.2% and Cellulase Onozuka R10 0.2%. Hypocotyls gave the highest yields of protoplasts, followed by cotyledons and calli. Protoplasts were cultivated in liquid and on solid media using both L4M (Burrus et al., 1991 and V-KM (Bokelman and Roest, 1983 media. Culture on solid M1 medium (L4M medium supplemented with NAA 3.0 mg•dm- 3, 2,4-D 0.1 mg•dm-3 and BA 1.0 mg•dm -3 gave a good planting efficiency with the development of many white-green colonies. These colonies gave rise to small calli which were transferred to MSmod medium (MS medium supplemented with KCI 5 g•dm-', and polyvinylpyrrolidone (PVP, 4 g• dm-3 containing benziladenine (BA, 0.5 mg•dm-3, naphtaleneacetic acid (NAA, 0.5 mg•dm-3 and giberelic acid (GA3 0.1 mg•dm-3. After two weeks, calli were transferred to MSmod medium containing BA 1.0 mg•dm-3, NAA 0.1 mg•dm-3, and GA3 0.1 mg•dm-3 for shoot formation. Shoots were excised and induced to root in MSmod supplemented with BA 0.1 mg•dm-3, NAA 1.0 mg•dm-3, and GA3 0.1 mg•dm-3. Plantlets were then transferred to sterilised vermiculite for greenhouse acclimation.

  14. Pyridine metabolism in tea plants: salvage, conjugate formation and catabolism.

    Science.gov (United States)

    Ashihara, Hiroshi; Deng, Wei-Wei

    2012-11-01

    Pyridine compounds, including nicotinic acid and nicotinamide, are key metabolites of both the salvage pathway for NAD and the biosynthesis of related secondary compounds. We examined the in situ metabolic fate of [carbonyl-(14)C]nicotinamide, [2-(14)C]nicotinic acid and [carboxyl-(14)C]nicotinic acid riboside in tissue segments of tea (Camellia sinensis) plants, and determined the activity of enzymes involved in pyridine metabolism in protein extracts from young tea leaves. Exogenously supplied (14)C-labelled nicotinamide was readily converted to nicotinic acid, and some nicotinic acid was salvaged to nicotinic acid mononucleotide and then utilized for the synthesis of NAD and NADP. The nicotinic acid riboside salvage pathway discovered recently in mungbean cotyledons is also operative in tea leaves. Nicotinic acid was converted to nicotinic acid N-glucoside, but not to trigonelline (N-methylnicotinic acid), in any part of tea seedlings. Active catabolism of nicotinic acid was observed in tea leaves. The fate of [2-(14)C]nicotinic acid indicates that glutaric acid is a major catabolite of nicotinic acid; it was further metabolised, and carbon atoms were finally released as CO(2). The catabolic pathway observed in tea leaves appears to start with the nicotinic acid N-glucoside formation; this pathway differs from catabolic pathways observed in microorganisms. Profiles of pyridine metabolism in tea plants are discussed.

  15. Experiments on tissue culture in the genus Lycopersicon miller : Shoot formation from protoplasts of tomato long-term cell cultures.

    Science.gov (United States)

    Koblitz, H; Koblitz, D

    1982-06-01

    Callus cultures from cotyledon explants were established and maintained in culture for more than two years. After several months callus cultures were transferred into liquid medium and cultured as cell suspensions. Protoplasts were isolated from these cell suspension cultures and cultured in a liquid medium. After formation of new cell walls the cells were further cultured in liquid medium and afterwards transferred to an agar-solidified medium to give a vigorously growing callus culture. In the case of the cultivar 'Lukullus' shoots were recovered from callus. All efforts to root these shoots failed and this, in addition to variations in appearence, suggests that the shoots are changed genetically possibly due to the prolonged culture period.

  16. Purification and Characterization of β-Galactosidases from Adsuki Bean Cotyledons%赤豆子叶β-半乳糖苷酶的纯化及其性质的研究

    Institute of Scientific and Technical Information of China (English)

    韩平治; 孟延发; 丁进芳

    2000-01-01

    The β-galactosidase A and B from Adsuki bean cotyledons were isolated by ammonium sulfate fractionation and DEAE-Sepharose FF ion exchange chromatography. The A form was further purified by CM-Sepharose FF ion exchange chromatography and Sephadex G-150 gel filtration. Purified β-galactosidase A showed one protein band on PAGE. It was also a single protein band on SDS-PAGE and its Mr was 3.3×104. Mr of A and B determined by gradient PAGE was the same as 1.4×105. It is suggested that β-galactosidase A comprised four identical subunits.The pI of β-galactosidase A and B estimated by isoelectric focusing PAGE were 7.6 and 4. 6 respectively. The apparent Km of A and B were 2. 08 mmol/L and 2. 45 mmol/L (ONPGal), 0. 75mmol/L and 1.24 mmol/L (PNPGal), 44 mmol/L and 25 mmol/L (lactose). Their activation energies were 43.9 kJ/mol and 34. 3 kJ/mol using ONPGal as substrate. Their optimum pH all were 4. 0. Their optimum temperatures were 50℃ and 55℃ respectively. Stability ranges of pH were pH 4. 0~6.0 and pH 3.5~5.0 separately. Galactose and lactose were reversibly competitive inhibitors. Ki for A were 6.21 mmol/L (galactose)and 329 mmol/L (lactcse),Ki for B were 3. 93mmol/L (galactose)and 169 mmol/L (lactose). Melibiose and raffinose were reversibly uncompetitive inhibitors against the enzymes. Metal ions and some chemical agents also showed inhibition against the enzymes.

  17. 均质在大豆全子叶豆腐制备中的作用%EFFECTS OF HOMOGENIZATION IN PRODUCTION OF TOFU MADE FROM WHOLE SOYBEAN COTYLEDON

    Institute of Scientific and Technical Information of China (English)

    刘浩; 魏安池; 盖均镒; 刘若瑜

    2012-01-01

    研究了高剪切均质机在大豆全子叶豆腐生产工艺中的工作条件和应用效果.结果表明:使用高剪切均质机对豆浆进行均质可以有效降低豆浆中不溶性颗粒的大小,从而提高豆腐的凝胶强度和品质;均质机最佳工作条件为转速25 000 r/min,均质6 min;豆浆稳定系数与豆腐的凝胶质构存在相关性,因而可以在制浆阶段通过测定豆浆的稳定系数,对豆腐的凝胶质构进行初步的判断.%This paper studied the working conditions and effects of a high shear homogenizer in the production of tofu made from whole soybean cotyledon. The results showed that the high shear homogenizer for homogenizing soybean milk could reduce the size of insoluble particles, thereby enhancing the strength and quality of tofu, and the best working conditions of the high shear homogenizer were working 6 min at 25 000 r/min. This study also found that the stability coefficient of soybean milk was correlated with the gel texture of tofu, so that the texture of tofu could be estimated primarily by measuring the stability coefficient of soybean milk on the soybean milk preparation stage.

  18. Galaxy formation.

    Science.gov (United States)

    Peebles, P J

    1998-01-01

    It is argued that within the standard Big Bang cosmological model the bulk of the mass of the luminous parts of the large galaxies likely had been assembled by redshift z approximately 10. Galaxy assembly this early would be difficult to fit in the widely discussed adiabatic cold dark matter model for structure formation, but it could agree with an isocurvature version in which the cold dark matter is the remnant of a massive scalar field frozen (or squeezed) from quantum fluctuations during inflation. The squeezed field fluctuations would be Gaussian with zero mean, and the distribution of the field mass therefore would be the square of a random Gaussian process. This offers a possibly interesting new direction for the numerical exploration of models for cosmic structure formation.

  19. The CUC1 and CUC2 Genes Promote Carpel Margin Meristem Formation during Arabidopsis Gynoecium Development

    Directory of Open Access Journals (Sweden)

    Yuri eKamiuchi

    2014-04-01

    Full Text Available Carpel margin meristems (CMMs, a pair of meristematic tissues present along the margins of two fused carpel primordia of Arabidopsis thaliana, are essential for the formation of ovules and the septum, two major internal structures of the gynoecium. Although a number of regulatory factors involved in shoot meristem activity are known to be required for the formation of these gynoecial structures, their direct roles in CMM development have yet to be addressed. Here we show that the CUP-SHAPED COTYLEDON genes CUC1 and CUC2, which are essential for shoot meristem initiation, are also required for formation and stable positioning of the CMMs. Early in CMM formation, CUC1 and CUC2 are also required for expression of the SHOOT MERISTEMLESS gene, a central regulator for stem cell maintenance in the shoot meristem. Moreover, plants carrying miR164-resistant forms of CUC1 and CUC2 resulted in extra CMM activity with altered positioning. Our results thus indicate that the regulatory proteins controlling shoot meristem activity also play critical roles in elaboration of the female reproductive organ through the control of meristematic activity.

  20. Arabidopsis R-SNARE proteins VAMP721 and VAMP722 are required for cell plate formation.

    Directory of Open Access Journals (Sweden)

    Liang Zhang

    Full Text Available BACKGROUND: Cell plate formation during plant cytokinesis is facilitated by SNARE complex-mediated vesicle fusion at the cell-division plane. However, our knowledge regarding R-SNARE components of membrane fusion machinery for cell plate formation remains quite limited. METHODOLOGY/PRINCIPAL FINDINGS: We report the in vivo function of Arabidopsis VAMP721 and VAMP722, two closely sequence-related R-SNAREs, in cell plate formation. Double homozygous vamp721vamp722 mutant seedlings showed lethal dwarf phenotypes and were characterized by rudimentary roots, cotyledons and hypocotyls. Furthermore, cell wall stubs and incomplete cytokinesis were frequently observed in vamp721vamp722 seedlings. Confocal images revealed that green fluorescent protein-tagged VAMP721 and VAMP722 were preferentially localized to the expanding cell plates in dividing cells. Drug treatments and co-localization analyses demonstrated that punctuate organelles labeled with VAMP721 and VAMP722 represented early endosomes overlapped with VHA-a1-labeled TGN, which were distinct from Golgi stacks and prevacuolar compartments. In addition, protein traffic to the plasma membrane, but not to the vacuole, was severely disrupted in vamp721vamp722 seedlings by subcellular localization of marker proteins. CONCLUSION/SIGNIFICANCE: These observations suggest that VAMP721 and VAMP722 are involved in secretory trafficking to the plasma membrane via TGN/early endosomal compartment, which contributes substantially to cell plate formation during plant cytokinesis.

  1. Cloud Formation

    Science.gov (United States)

    Graham, Mark Talmage

    2004-05-01

    Cloud formation is crucial to the heritage of modern physics, and there is a rich literature on this important topic. In 1927, Charles T.R. Wilson was awarded the Nobel Prize in physics for applications of the cloud chamber.2 Wilson was inspired to study cloud formation after working at a meteorological observatory on top of the highest mountain in Scotland, Ben Nevis, and testified near the end of his life, "The whole of my scientific work undoubtedly developed from the experiments I was led to make by what I saw during my fortnight on Ben Nevis in September 1894."3 To form clouds, Wilson used the sudden expansion of humid air.4 Any structure the cloud may have is spoiled by turbulence in the sudden expansion, but in 1912 Wilson got ion tracks to show up by using strobe photography of the chamber immediately upon expansion.5 In the interim, Millikan's study in 1909 of the formation of cloud droplets around individual ions was the first in which the electron charge was isolated. This study led to his famous oil drop experiment.6 To Millikan, as to Wilson, meteorology and physics were professionally indistinct. With his meteorological physics expertise, in WWI Millikan commanded perhaps the first meteorological observation and forecasting team essential to military operation in history.7 But even during peacetime meteorology is so much of a concern to everyone that a regular news segment is dedicated to it. Weather is the universal conversation topic, and life on land could not exist as we know it without clouds. One wonders then, why cloud formation is never covered in physics texts.

  2. Dynamic coupling of pattern formation and morphogenesis in the developing vertebrate retina.

    Directory of Open Access Journals (Sweden)

    Alexander Picker

    2009-10-01

    Full Text Available During embryonic development, pattern formation must be tightly synchronized with tissue morphogenesis to coordinate the establishment of the spatial identities of cells with their movements. In the vertebrate retina, patterning along the dorsal-ventral and nasal-temporal (anterior-posterior axes is required for correct spatial representation in the retinotectal map. However, it is unknown how specification of axial cell positions in the retina occurs during the complex process of early eye morphogenesis. Studying zebrafish embryos, we show that morphogenetic tissue rearrangements during eye evagination result in progenitor cells in the nasal half of the retina primordium being brought into proximity to the sources of three fibroblast growth factors, Fgf8/3/24, outside the eye. Triple-mutant analysis shows that this combined Fgf signal fully controls nasal retina identity by regulating the nasal transcription factor Foxg1. Surprisingly, nasal-temporal axis specification occurs very early along the dorsal-ventral axis of the evaginating eye. By in vivo imaging GFP-tagged retinal progenitor cells, we find that subsequent eye morphogenesis requires gradual tissue compaction in the nasal half and directed cell movements into the temporal half of the retina. Balancing these processes drives the progressive alignment of the nasal-temporal retina axis with the anterior-posterior body axis and is controlled by a feed-forward effect of Fgf signaling on Foxg1-mediated cell cohesion. Thus, the mechanistic coupling and dynamic synchronization of tissue patterning with morphogenetic cell behavior through Fgf signaling leads to the graded allocation of cell positional identity in the eye, underlying retinotectal map formation.

  3. Cement Formation

    DEFF Research Database (Denmark)

    Telschow, Samira; Jappe Frandsen, Flemming; Theisen, Kirsten

    2012-01-01

    Cement production has been subject to several technological changes, each of which requires detailed knowledge about the high multiplicity of processes, especially the high temperature process involved in the rotary kiln. This article gives an introduction to the topic of cement, including...... an overview of cement production, selected cement properties, and clinker phase relations. An extended summary of laboratory-scale investigations on clinkerization reactions, the most important reactions in cement production, is provided. Clinker formations by solid state reactions, solid−liquid and liquid...

  4. Galaxy Formation

    CERN Document Server

    Longair, Malcolm S

    2008-01-01

    This second edition of Galaxy Formation is an up-to-date text on astrophysical cosmology, expounding the structure of the classical cosmological models from a contemporary viewpoint. This forms the background to a detailed study of the origin of structure and galaxies in the Universe. The derivations of many of the most important results are derived by simple physical arguments which illuminate the results of more advanced treatments. A very wide range of observational data is brought to bear upon these problems, including the most recent results from WMAP, the Hubble Space Telescope, galaxy surveys like the Sloan Digital Sky Survey and the 2dF Galaxy Redshift Survey, studies of Type 1a supernovae, and many other observations.

  5. Analysis of peg formation in cucumber seedlings grown on clinostats and in a microgravity (space) environment

    Science.gov (United States)

    Link, B. M.; Cosgrove, D. J.

    1999-01-01

    In young cucumber seedlings, the peg is a polar out-growth of tissue that functions by snagging the seed coat, thereby freeing the cotyledons. Previous studies have indicated that peg formation is gravity dependent. In this study we analyzed peg formation in cucumber seedlings (Cucumis sativus L. cv Burpee Hybrid II) grown under conditions of normal gravity, microgravity, and simulated microgravity (clinostat rotation). Seeds were germinated on the ground, in clinostats and on board the space shuttle (STS 95) for 1-2 days, frozen and subsequently examined for their stage of development, degree of hook formation, number of pegs formed, and peg morphology. The frequency of peg formation in space grown seedlings was found to be nearly identical to that of clinostat grown seedlings and to differ from that of seedlings germinated under normal gravity only in a minority of cases; approximately 6% of the seedlings formed two pegs and nearly 2% of the seedlings lacked pegs, whereas such abnormalities did not occur in ground controls. The degree of hook formation was found to be less pronounced for space grown seedlings, compared to clinostat grown seedlings, indicating a greater degree of decoupling between peg formation and hook formation in space. Nonetheless, in all seedlings having single pegs and a hook, the peg was found to be positioned correctly on the inside of the hook, showing that there is coordinate development even in microgravity environments. Peg morphologies were altered in space grown samples, with the pegs having a blunt appearance and many pegs showing alterations in expansion, with the peg extending out over the edges of the seed coat and downwards. These phenotypes were not observed in clinostat or ground grown seedlings.

  6. Pattern Formation

    Science.gov (United States)

    Hoyle, Rebecca

    2006-03-01

    From the stripes of a zebra and the spots on a leopard's back to the ripples on a sandy beach or desert dune, regular patterns arise everywhere in nature. The appearance and evolution of these phenomena has been a focus of recent research activity across several disciplines. This book provides an introduction to the range of mathematical theory and methods used to analyse and explain these often intricate and beautiful patterns. Bringing together several different approaches, from group theoretic methods to envelope equations and theory of patterns in large-aspect ratio-systems, the book also provides insight behind the selection of one pattern over another. Suitable as an upper-undergraduate textbook for mathematics students or as a fascinating, engaging, and fully illustrated resource for readers in physics and biology, Rebecca Hoyle's book, using a non-partisan approach, unifies a range of techniques used by active researchers in this growing field. Accessible description of the mathematical theory behind fascinating pattern formation in areas such as biology, physics and materials science Collects recent research for the first time in an upper level textbook Features a number of exercises - with solutions online - and worked examples

  7. Phenotype abnormality: 153 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 153 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u1ria224u659i decreased efficiency... in organ named root during process named lateral root primordium formation stage ... root ... decreased efficiency ... lateral root primordium formation stage ...

  8. The formation of Anthocyanic Vacuolar Inclusions in Arabidopsis thaliana and implications for the sequestration of anthocyanin pigments.

    Science.gov (United States)

    Pourcel, Lucille; Irani, Niloufer G; Lu, Yuhua; Riedl, Ken; Schwartz, Steve; Grotewold, Erich

    2010-01-01

    Anthocyanins are flavonoid pigments that accumulate in the large central vacuole of most plants. Inside the vacuole, anthocyanins can be found uniformly distributed or as part of sub-vacuolar pigment bodies, the Anthocyanic Vacuolar Inclusions (AVIs). Using Arabidopsis seedlings grown under anthocyanin-inductive conditions as a model to understand how AVIs are formed, we show here that the accumulation of AVIs strongly correlates with the formation of cyanidin 3-glucoside (C3G) and derivatives. Arabidopsis mutants that fail to glycosylate anthocyanidins at the 5-O position (5gt mutant) accumulate AVIs in almost every epidermal cell of the cotyledons, as compared to wild-type seedlings, where only a small fraction of the cells show AVIs. A similar phenomenon is observed when seedlings are treated with vanadate. Highlighting a role for autophagy in the formation of the AVIs, we show that various mutants that interfere with the autophagic process (atg mutants) display lower numbers of AVIs, in addition to a reduced accumulation of anthocyanins. Interestingly, vanadate increases the numbers of AVIs in the atg mutants, suggesting that several pathways might participate in AVI formation. Taken together, our results suggest novel mechanisms for the formation of sub-vacuolar compartments capable of accumulating anthocyanin pigments.

  9. Somatic Embryogenesis and Plant Regeneration of Caragana fruticosa from Cotyledons of Its Young Zygotic Embryos%极东锦鸡儿幼胚子叶的体细胞胚胎发生和植株再生

    Institute of Scientific and Technical Information of China (English)

    沈海龙; 翟晓杰; 杨玲

    2011-01-01

    Somatic embryogenesis and plant regeneration was conducted by taking cotyledons of young zygotic embryos as explants. Somatic embryos were obtained on MS medium supplemented with 500 mg·L-1 hydrolyzed casein, 30 g·L-1 sugar, 8 g·L-1 agar and different concentrations of BA and NAA or 2,4-D. The best combinations of plant growth regulators (PGRs) were 5 mg·L-1 NAA+5 mg·L-1 BA and 5 mg·L-1 2,4-D+1 mg·L-1 BA with a inductivity of 14% and 10% and maximum somatic embryos per explant of 4.5 and 10.5 respectively.The somatic embryos maturated on MS medium without PGRs, germinated on MS supplemented with NAA 0.01 mg·L-1, sugar 20 g·L-1, agar 6 g·L-1 at the germination rate of 58.94%. Germinated somatic embryos were able to transform plantlets on MS medium with a transformation rate of 87%. Acclimated plantlets grew normally with 40% transplanting survival rate in growing medium in composition of 50% peat moss, 40% vermiculite and 10% polite.%以极东锦鸡儿未成熟合子胚子叶为外植体进行其体细胞胚胎发生和植株再生研究.在添加不同BA与NAA或2,4-D,外加500 mg·L-1水解酪蛋白、30 g·L-1蔗糖和8 g·L-1琼脂的MS培养基上诱导产生了体细胞胚.在5 mg·L-1NAA+5 mg·L-1BA和5 mg·L-1 2,4.D+1 mg·L-1BA处理中体胚诱导率分别为14%和10%;NAA处理每外植体上诱导出的体胚数量最多为4.3个,而2,4-D为10.5个.体细胞胚经成熟培养后,在添加0.01 mg·L-1NAA、20 g·L-1蔗糖和6 g·L-1琼脂的MS培养基上萌发率达到58.94%.萌发的体胚在MS培养基上长成正常小植株,再生率为87%.经炼苗后的体胚苗移植到草炭土:蛭石:珍珠岩=5∶4∶1(V/V/V)的栽培基质中,可以正常生长,移栽成活率为40%.

  10. Carboidratos das fibras de cotilédones e proteínas de produtos derivados de soja (Glycine max (L. Merril Carbohydrates from cotyledon fibers and proteins of soybean (Glycine max (L. Merril derivatives

    Directory of Open Access Journals (Sweden)

    Neusa Fátima Seibel

    2008-09-01

    Full Text Available Fibras alimentares obtidas de cotilédones de soja original (FAO e micronizada (FAM foram fracionadas e avaliadas quanto a polissacarídeos e monossacarídeos constituintes. O componente majoritário foi a hemicelulose, totalizando 59% em FAO e 51% na FAM, a pectina representou em média 14% e a celulose 8,5%. As duas amostras de fibras apresentaram 17 mg.g-1 de ácidos urônicos e a mesma composição de monossacarídeos, sendo galactose, glicose e arabinose/ramnose os principais componentes. As proteínas de concentrado protéico, farinha desengordurada e fibras alimentares (FAO e FAM foram avaliadas quanto à solubilidade em diferentes solventes (NaCl, água, etanol e NaOH e quanto ao peso molecular. A farinha desengordurada de soja teve a maior parte das proteínas passível de extração com solução salina, e o concentrado protéico e as fibras de cotilédones com solução alcalina. A fração protéica que não foi extraída com nenhum dos quatro solventes utilizados permaneceu no resíduo, o maior percentual estava no concentrado, seguido pela fibra alimentar micronizada e a farinha, já a menor quantidade estava na fibra alimentar original. A eletroforese das proteínas dos quatro ingredientes alimentares mostrou as subunidades que constituem as frações β-conglicinina e glicinina. Bandas com peso molecular próximo aos 30 kDa foram reveladas nas proteínas extraídas das fibras de cotilédones de soja, sendo provavelmente glicoproteínas de parede celular, ricas em hidroxiprolina.Dietary fibers from soybean cotyledons classified as original (ODF and milled (MDF were fractionated and evaluated as to fractions and monosaccharide composition. The major constituent was hemicellulose, 59% in ODF and 51% MDF, pectin was in average 14% and cellulose, 8.5%. Both samples had 17 mg.g-1 uronic acids and the same composition in monosaccharides: galactose, glucose and arabinose/rhamnose, after hydrolysis. Protein fractions extracted from

  11. Medicago truncatula ENOD40-1 and ENOD40-2 are both involved in nodule initiation and bacteroid development

    NARCIS (Netherlands)

    Wan, X.; Hontelez, J.; Lillo, A.; Guarnerio, C.; Peut, van de D.; Fedorova, E.; Bisseling, T.; Franssen, H.

    2007-01-01

    The establishment of a nitrogen-fixing root nodule on legumes requires the induction of mitotic activity of cortical cells leading to the formation of the nodule primordium and the infection process by which the bacteria enter this primordium. Several genes are up-regulated during these processes, a

  12. Rapid auxin-induced nitric oxide accumulation and subsequent tyrosine nitration of proteins during adventitious root formation in sunflower hypocotyls.

    Science.gov (United States)

    Yadav, Sunita; David, Anisha; Baluška, František; Bhatla, Satish C

    2013-03-01

    Using NO specific probe (MNIP-Cu), rapid nitric oxide (NO) accumulation as a response to auxin (IAA) treatment has been observed in the protoplasts from the hypocotyls of sunflower seedlings (Helianthus annuus L.). Incubation of protoplasts in presence of NPA (auxin efflux blocker) and PTIO (NO scavenger) leads to significant reduction in NO accumulation, indicating that NO signals represent an early signaling event during auxin-induced response. A surge in NO production has also been demonstrated in whole hypocotyl explants showing adventitious root (AR) development. Evidence of tyrosine nitration of cytosolic proteins as a consequence of NO accumulation has been provided by western blot analysis and immunolocalization in the sections of AR producing hypocotyl segments. Most abundant anti-nitrotyrosine labeling is evident in proteins ranging from 25-80 kDa. Tyrosine nitration of a particular protein (25 kDa) is completely absent in presence of NPA (which suppresses AR formation). Similar lack of tyrosine nitration of this protein is also evident in other conditions which do not allow AR differentiation. Immunofluorescent localization experiments have revealed that non-inductive treatments (such as PTIO) for AR develpoment from hypocotyl segments coincide with symplastic and apoplastic localization of tyrosine nitrated proteins in the xylem elements, in contrast with negligible (and mainly apoplastic) nitration of proteins in the interfascicular cells and phloem elements. Application of NPA does not affect tyrosine nitration of proteins even in the presence of an external source of NO (SNP). Tyrosine nitrated proteins are abundant around the nuclei in the actively dividing cells of the root primordium. Thus, NO-modulated rapid response to IAA treatment through differential distribution of tyrosine nitrated proteins is evident as an inherent aspect of the AR development.

  13. Common File Formats.

    Science.gov (United States)

    Mills, Lauren

    2014-03-21

    An overview of the many file formats commonly used in bioinformatics and genome sequence analysis is presented, including various data file formats, alignment file formats, and annotation file formats. Example workflows illustrate how some of the different file types are typically used.

  14. Soybean NAC transcription factors promote abiotic stress tolerance and lateral root formation in transgenic plants.

    Science.gov (United States)

    Hao, Yu-Jun; Wei, Wei; Song, Qing-Xin; Chen, Hao-Wei; Zhang, Yu-Qin; Wang, Fang; Zou, Hong-Feng; Lei, Gang; Tian, Ai-Guo; Zhang, Wan-Ke; Ma, Biao; Zhang, Jin-Song; Chen, Shou-Yi

    2011-10-01

    NAC transcription factors play important roles in plant growth, development and stress responses. Previously, we identified multiple NAC genes in soybean (Glycine max). Here, we identify the roles of two genes, GmNAC11 and GmNAC20, in stress responses and other processes. The two genes were differentially induced by multiple abiotic stresses and plant hormones, and their transcripts were abundant in roots and cotyledons. Both genes encoded proteins that localized to the nucleus and bound to the core DNA sequence CGT[G/A]. In the protoplast assay system, GmNAC11 acts as a transcriptional activator, whereas GmNAC20 functions as a mild repressor; however, the C-terminal end of GmANC20 has transcriptional activation activity. Over-expression of GmNAC20 enhances salt and freezing tolerance in transgenic Arabidopsis plants; however, GmNAC11 over-expression only improves salt tolerance. Over-expression of GmNAC20 also promotes lateral root formation. GmNAC20 may regulate stress tolerance through activation of the DREB/CBF-COR pathway, and may control lateral root development by altering auxin signaling-related genes. GmNAC11 probably regulates DREB1A and other stress-related genes. The roles of the two GmNAC genes in stress tolerance were further analyzed in soybean transgenic hairy roots. These results provide a basis for genetic manipulation to improve the agronomic traits of important crops.

  15. Formation and distribution of sennosides in cassia angustifolia, as determined by a sensitive and specific radioimmunnoassay

    Energy Technology Data Exchange (ETDEWEB)

    Atzorn, R.; Weiler, E.W.; Zenk, M.H.

    1981-01-01

    A radioimmunoassay for the quantitation of nanogram-amounts of sennoside B and related compounds in plant extracts is described. The assay makes use of (/sup 3/H)-8-glucosidorheinanthrone of high specific activity (5.2 Ci/mmol) whose synthesis is reported here. From this material, (/sup 3/H)-sennoside A and (/sup 3/H)-sennoside B have also been synthesized. The assay is applied to the analysis of sennoside formation and distribution in Cassia angustifolia VAHL. High levels of sennosides in dried leaves and fruits have been observed whereas the seed alone, as well as stems and roots, contain very little sennoside. In flowers, as much as 4-5% of the dry weight consists of sennoside B and other immunoreactive constituents. Sennosides have been found in cotyledons of three day old seedlings in concentrations comparable to that of the mature leaf. Upon dehydration, leaf levels of sennoside B rise steadily, this rise being inversely correlated with the water loss. The absolute levels of sennoside B formed this way are the same as compared to rapid drying at 60/sup 0/C.

  16. Formation and distribution of sennosides in Cassia angustifolia, as determined by a sensitive and specific radioimmunoassay.

    Science.gov (United States)

    Atzorn, R; Weiler, E W; Zenk, M H

    1981-01-01

    A radioimmunoassay for the quantitation of nanogram-amounts of sennoside B and related compounds in plant extracts is described. The assay makes use of [ (3)H]-8-glucosidorheinanthrone of high specific activity (5.2 Ci/mmol) whose synthesis is reported here. From this material, [ (3)H]-sennoside A and [ (3)H]-sennoside B have also been synthesized. The assay is applied to the analysis of sennoside formation and distribution in CASSIA ANGUSTIFOLIA VAHL. High levels of sennosides in dried leaves and fruits have been observed whereas the seed alone, as well as stems and roots, contain very little sennoside. In flowers, as much as 4-5% of the dry weight consists of sennoside B and other immunoreactive constituents. Sennosides have been found in cotyledons of three day old seedlings in concentrations comparable to that of the mature leaf. Upon dehydration, leaf levels of sennoside B rise steadily, this rise being inversely correlated with the water loss. The absolute levels of sennoside B formed this way are the same as compared to rapid drying at 60 degrees C.

  17. The Format Registry Problem

    Directory of Open Access Journals (Sweden)

    Gary McGath

    2013-01-01

    Full Text Available File format identification is an important issue in digital preservation. Several noteworthy attempts, including PRONOM, GDFR, and UDFR, have been made at creating a comprehensive repository of format information. The sheer amount of information to cover and the constant introduction of new formats and format versions has limited their success. Alternative approaches, such as Linked Data and offering limited per-format information with identifiers that can be used elsewhere, may lead to greater success.

  18. Formate Formation and Formate Conversion in Biological Fuels Production

    Directory of Open Access Journals (Sweden)

    Bryan R. Crable

    2011-01-01

    Full Text Available Biomethanation is a mature technology for fuel production. Fourth generation biofuels research will focus on sequestering CO2 and providing carbon-neutral or carbon-negative strategies to cope with dwindling fossil fuel supplies and environmental impact. Formate is an important intermediate in the methanogenic breakdown of complex organic material and serves as an important precursor for biological fuels production in the form of methane, hydrogen, and potentially methanol. Formate is produced by either CoA-dependent cleavage of pyruvate or enzymatic reduction of CO2 in an NADH- or ferredoxin-dependent manner. Formate is consumed through oxidation to CO2 and H2 or can be further reduced via the Wood-Ljungdahl pathway for carbon fixation or industrially for the production of methanol. Here, we review the enzymes involved in the interconversion of formate and discuss potential applications for biofuels production.

  19. Effects of shading on spike differentiation and grain yield formation of summer maize in the field

    Science.gov (United States)

    Cui, Haiyan; Camberato, James J.; Jin, Libin; Zhang, Jiwang

    2015-09-01

    A field experiment was conducted to study the effects of shading on tassel and ear development and yield formation of three summer maize hybrids Zhenjie 2 (ZJ2), Denghai 605 (DH605), and Zhengdan 958 (ZD958). The ambient sunlight treatment was used as control (CK) and shading treatments (40 % of ambient sunlight) were applied at different growth stages from silking stage (R1) to physiological maturity stage (R6) (treatment S1), from the sixth extended leaf stage (V6) to R1 (treatment S2) and from seeding to R6 (treatment S3). Shading had no significant effect on the time from seeding to shoot emergence (VE); however, subsequent growth and development were delayed with shading beyond this point. The differentiation time of both tassel and ear delayed, and female spike (tassel) floret differentiation, sexual organ formation time, and anthesis-silking interval (ASI) were lengthened. After shading, the total number of floret, silk, and fertilization floret reduced significantly; the number of abortive seeds increased, and the total setting percentage among different treatments showed that CK>S2>S1>S3; and the total setting percentages in S1, S2, and S3 of ZD958 were 44, 72, and 15 % respectively. The total floret number of tassel primordium differentiation, fertility rate, and seed setting rate of florets in S3 treatment was the minimum; kernels per ear decreased seriously and single ear setting percentage was only 16 %; although floret degeneration number of S2 during ear differentiation stages increased and floret fertility rate reduced than that of CK, fertilization flower seed production increased and abortive seed decreased after canceling shading. Aborted kernel of S1 increased and kernel dry weight reduced, resulting in a significant decrease of kernel number per ear and kernel weight, and the grain abortive rate of 40-62 %. In conclusion, shading changed the growth and development process and caused infertility of tassel and ear; tassel branches decreased

  20. GmEXPB2, a Cell Wall β-Expansin, Affects Soybean Nodulation through Modifying Root Architecture and Promoting Nodule Formation and Development1[OPEN

    Science.gov (United States)

    Li, Xinxin; Zhao, Jing; Tan, Zhiyuan; Liao, Hong

    2015-01-01

    Nodulation is an essential process for biological nitrogen (N2) fixation in legumes, but its regulation remains poorly understood. Here, a β-expansin gene, GmEXPB2, was found to be critical for soybean (Glycine max) nodulation. GmEXPB2 was preferentially expressed at the early stage of nodule development. β-Glucuronidase staining further showed that GmEXPB2 was mainly localized to the nodule vascular trace and nodule vascular bundles, as well as nodule cortical and parenchyma cells, suggesting that GmEXPB2 might be involved in cell wall modification and extension during nodule formation and development. Overexpression of GmEXPB2 dramatically modified soybean root architecture, increasing the size and number of cortical cells in the root meristematic and elongation zones and expanding root hair density and size of the root hair zone. Confocal microscopy with green fluorescent protein-labeled rhizobium USDA110 cells showed that the infection events were significantly enhanced in the GmEXPB2-overexpressing lines. Moreover, nodule primordium development was earlier in overexpressing lines compared with wild-type plants. Thereby, overexpression of GmEXPB2 in either transgenic soybean hairy roots or whole plants resulted in increased nodule number, nodule mass, and nitrogenase activity and thus elevated plant N and phosphorus content as well as biomass. In contrast, suppression of GmEXPB2 in soybean transgenic composite plants led to smaller infected cells and thus reduced number of big nodules, nodule mass, and nitrogenase activity, thereby inhibiting soybean growth. Taken together, we conclude that GmEXPB2 critically affects soybean nodulation through modifying root architecture and promoting nodule formation and development and subsequently impacts biological N2 fixation and growth of soybean. PMID:26432877

  1. GmEXPB2, a Cell Wall β-Expansin, Affects Soybean Nodulation through Modifying Root Architecture and Promoting Nodule Formation and Development.

    Science.gov (United States)

    Li, Xinxin; Zhao, Jing; Tan, Zhiyuan; Zeng, Rensen; Liao, Hong

    2015-12-01

    Nodulation is an essential process for biological nitrogen (N2) fixation in legumes, but its regulation remains poorly understood. Here, a β-expansin gene, GmEXPB2, was found to be critical for soybean (Glycine max) nodulation. GmEXPB2 was preferentially expressed at the early stage of nodule development. β-Glucuronidase staining further showed that GmEXPB2 was mainly localized to the nodule vascular trace and nodule vascular bundles, as well as nodule cortical and parenchyma cells, suggesting that GmEXPB2 might be involved in cell wall modification and extension during nodule formation and development. Overexpression of GmEXPB2 dramatically modified soybean root architecture, increasing the size and number of cortical cells in the root meristematic and elongation zones and expanding root hair density and size of the root hair zone. Confocal microscopy with green fluorescent protein-labeled rhizobium USDA110 cells showed that the infection events were significantly enhanced in the GmEXPB2-overexpressing lines. Moreover, nodule primordium development was earlier in overexpressing lines compared with wild-type plants. Thereby, overexpression of GmEXPB2 in either transgenic soybean hairy roots or whole plants resulted in increased nodule number, nodule mass, and nitrogenase activity and thus elevated plant N and phosphorus content as well as biomass. In contrast, suppression of GmEXPB2 in soybean transgenic composite plants led to smaller infected cells and thus reduced number of big nodules, nodule mass, and nitrogenase activity, thereby inhibiting soybean growth. Taken together, we conclude that GmEXPB2 critically affects soybean nodulation through modifying root architecture and promoting nodule formation and development and subsequently impacts biological N2 fixation and growth of soybean.

  2. Establishing the plane of symmetry for lumen formation and bilateral brain formation in the zebrafish neural rod.

    Science.gov (United States)

    Buckley, Clare; Clarke, Jon

    2014-07-01

    The lumen of the zebrafish neural tube develops precisely at the midline of the solid neural rod primordium. This process depends on cell polarisation and cell rearrangements, both of which are manifest at the midline of the neural rod. The result of this cell polarisation and cell rearrangement is an epithelial tube that has overt mirror-symmetry, such that cell morphology and apicobasal polarisation are mirrored across the midline of the neural tube. This article discusses how this mirror-symmetry is established and proposes the hypothesis that positioning the cells' centrosomes to the midline of the neural rod is a key event in organising this process.

  3. Embryogenesis, a process of pattern formation

    Institute of Scientific and Technical Information of China (English)

    Meng-Xiang SUN

    2011-01-01

    @@ Plant embryogenesis is traditionally defined as a develop-mental process from zygote to mature embryo, which has the potential to form a complete plant (Bhojwani, 1974; Hu,2005).In dicotyledonous species, the fertilized egg or zygote usually divides according to a stereotyped pattern and gives rise to an embryo that consists of an embryonic shoot,cotyledons, hypocotyls, and an embryonic root.Thus, the basic body plan of the plant is established during the embryogenesis.Interestingly, the shoot-leaf-stem structure,not including the root, is repeatedly photocopied as a basic unit throughout plant vegetative growth (Wolpert et al.,2002).

  4. Simple Ontology Format (SOFT)

    Energy Technology Data Exchange (ETDEWEB)

    2011-10-01

    Simple Ontology Format (SOFT) library and file format specification provides a set of simple tools for developing and maintaining ontologies. The library, implemented as a perl module, supports parsing and verification of the files in SOFt format, operations with ontologies (adding, removing, or filtering of entities), and converting of ontologies into other formats. SOFT allows users to quickly create ontologies using only a basic text editor, verify it, and portray it in a graph layout system using customized styles.

  5. Avaliação da concentração de proteínas e da atividade de α-galactosidases nos cotilédones e no eixo embrionário de sementes de Dalbergia nigra durante a germinação Proteins and activity of α-galactosidases determination in cotyledons and embryonic axis of Dalbergia nigra seeds during germination

    Directory of Open Access Journals (Sweden)

    Lanna Clicia Carrijo

    2011-01-01

    Full Text Available Este trabalho teve como objetivos a quantificação de proteínas e da atividade da enzima α-galactosidase, no eixo embrionário e nos cotilédones, de sementes de Dalbergia nigra (jacarandá-da-bahia durante a germinação. As sementes foram colocadas para embeber em água por sete dias, sendo retiradas amostras para a avaliação bioquímica e cinética da enzima. A atividade da enzima α-galactosidase aumenta com a embebição das sementes nos dois compartimentos, embora não esteja presente no eixo embrionário de sementes secas. A diferença na atividade da enzima entre os cotilédones e o eixo embrionário foi significativa. O pH 5,5 foi o de máxima atividade para as enzimas de ambos os compartimentos. A temperatura que mais estimulou a atividade da enzima nos cotilédones foi 50 ºC e de 50 a 60 ºC no eixo embrionário. A atividade da α-galactosidase foi inibida por β-mercaptoetanol e cobre, em ambos os compartimentos, enquanto a lactose e o cloreto de sódio estimularam a atividade tanto nos cotilédones como no eixo embrionário. Os valores de K M para enzimas do eixo embrionário e dos cotilédones foram de 0,239 e 0,228 mM, respectivamente.This work aimed to quantify the protein content and the α-galactosidase activity in the embryonic axis and in the cotyledons of Dalbergia nigra seeds during the imbibition period. The seeds were submitted to water imbibition during seven days. Biochemical and kinetic characterization of the enzyme were done from samples taken during the imbibition period. The activity of the α-galactosidase increased in the two compartments with the soaking of the seeds, although, the enzyme activity was not detected in the embryonic axis of dry seeds. The difference in the activity of the enzyme between cotyledons and embryonic axis was significant. The pH of maximum activity was 5.5 for the enzyme of both compartments. In the cotyledons the higher activity of the enzyme was obtained at 50 ºC. In the

  6. Star Formation for Predictive Primordial Galaxy Formation

    Science.gov (United States)

    Milosavljević, Miloš; Safranek-Shrader, Chalence

    The elegance of inflationary cosmology and cosmological perturbation theory ends with the formation of the first stars and galaxies, the initial sources of light that launched the phenomenologically rich process of cosmic reionization. Here we review the current understanding of early star formation, emphasizing unsolved problems and technical challenges. We begin with the first generation of stars to form after the Big Bang and trace how they influenced subsequent star formation. The onset of chemical enrichment coincided with a sharp increase in the overall physical complexity of star forming systems. Ab-initio computational treatments are just now entering the domain of the predictive and are establishing contact with local observations of the relics of this ancient epoch.

  7. Formation Flying Concept Issues

    Directory of Open Access Journals (Sweden)

    M. V. Palkin

    2015-01-01

    Full Text Available The term “formation flying” implies coordinated movement of at least two satellites on coplanar and non-coplanar orbits with a maximum distance between them being much less than the length of the orbit. Peculiarities of formation flying concept also include:- automatic coordination of satellites;- sub-group specialization of formation flying satellites;- equipment and data exchange technology unification in each specialized group or subgroup.Formation flying satellites can be classified according to the configuration stability level (order (array, cluster («swarm», intergroup specialization rules («central satellite», «leader», «slave», manoeuvrability («active» and «passive» satellites.Tasks of formation flying include:- experiments with payload, distributed in formation flying satellites;- various near-earth space and earth-surface research;- super-sized aperture antenna development;- land-based telescope calibration;- «space advertisement» (earth-surface observable satellite compositions of a logotype, word, etc.;- orbital satellite maintenance, etc.Main issues of formation flying satellite system design are:- development of an autonomous satellite group manoeuvring technology;- providing a sufficient characteristic velocity of formation flying satellites;- ballistic and navigation maintenance for satellite formation flying;- technical and economic assessment of formation flying orbital delivery and deployment;- standardization, unification, miniaturization and integration of equipment;- intergroup and intersatellite function redistribution.

  8. The Conic Benchmark Format

    DEFF Research Database (Denmark)

    Friberg, Henrik A.

    This document constitutes the technical reference manual of the Conic Benchmark Format with le extension: .cbf or .CBF. It unies linear, second-order cone (also known as conic quadratic) and semidenite optimization with mixed-integer variables. The format has been designed with benchmark libraries...... in mind, and therefore focuses on compact and easily parsable representations. The problem structure is separated from the problem data, and the format moreover facilitate benchmarking of hotstart capability through sequences of changes....

  9. Formative Assessment in Context

    Science.gov (United States)

    Oxenford-O'Brian, Julie

    2013-01-01

    This dissertation responds to critical gaps in current research on formative assessment practice which could limit successful implementation of this practice within the K-12 classroom context. The study applies a socio cultural perspective of learning to interpret a cross-case analysis of formative assessment practice occurring during one…

  10. Formation of multiple networks

    DEFF Research Database (Denmark)

    Magnani, Matteo; Rossi, Luca

    2013-01-01

    we introduce the first network formation model for multiple networks. Network formation models are among the most popular tools in traditional network studies, because of both their practical and theoretical impact. However, existing models are not sufficient to describe the generation of multiple...

  11. Isothermal Martensite Formation

    DEFF Research Database (Denmark)

    Villa, Matteo

    Isothermal (i.e. time dependent) martensite formation in steel was first observed in the 40ies of the XXth century and is still treated as an anomaly in the description of martensite formation which is considered as a-thermal (i.e. independent of time). Recently, the clarification of the mechanis...

  12. Galaxy Formation Theory

    CERN Document Server

    Benson, Andrew J

    2010-01-01

    We review the current theory of how galaxies form within the cosmological framework provided by the cold dark matter paradigm for structure formation. Beginning with the pre-galactic evolution of baryonic material we describe the analytical and numerical understanding of how baryons condense into galaxies, what determines the structure of those galaxies and how internal and external processes (including star formation, merging, active galactic nuclei etc.) determine their gross properties and evolution. Throughout, we highlight successes and failings of current galaxy formation theory. We include a review of computational implementations of galaxy formation theory and assess their ability to provide reliable modeling of this complex phenomenon. We finish with a discussion of several "hot topics" in contemporary galaxy formation theory and assess future directions for this field.

  13. Usage Record Format Recommendation

    CERN Document Server

    Nilsen, J.K.; Muller-Pfeerkorn, R

    2013-01-01

    For resources to be shared, sites must be able to exchange basic accounting and usage data in a common format. This document describes a common format which enables the exchange of basic accounting and usage data from different resources. This record format is intended to facilitate the sharing of usage information, particularly in the area of the accounting of jobs, computing, memory, storage and cloud usage but with a structure that allows an easy extension to other resources. This document describes the Usage Record components both in natural language form and annotated XML. This document does not address how these records should be used, nor does it attempt to dictate the format in which the accounting records are stored. Instead, it denes a common exchange format. Furthermore, nothing is said regarding the communication mechanisms employed to exchange the records, i.e. transport layer, framing, authentication, integrity, etc.

  14. When efficient star formation drives cluster formation

    CERN Document Server

    Parmentier, G

    2008-01-01

    We investigate the impact of the star formation efficiency in cluster forming cores on the evolution of the mass in star clusters over the age range 1-100Myr, when star clusters undergo their infant weight-loss/mortality phase. Assuming a constant formation rate of gas-embedded clusters and a weak tidal field, we show that the ratio between the total mass in stars bound to the clusters over that age range and the total mass in stars initially formed in gas-embedded clusters is a strongly increasing function of the averaged local SFE, with little influence from any assumed core mass-radius relation. Our results suggest that, for young starbursts with estimated tidal field strength and known recent star formation history, observed cluster-to-star mass ratios, once corrected for the undetected clusters, constitute promising probes of the local SFE, without the need of resorting to gas mass estimates. Similarly, the mass ratio of stars which remain in bound clusters at the end of the infant mortality/weight-loss ...

  15. Methemoglobin formation by paraquat.

    Directory of Open Access Journals (Sweden)

    Watanabe,Shinsaku

    1982-12-01

    Full Text Available Paraquat is a broad spectrum herbicide known to be highly lethal to man and animals. Its toxicity is characterized by acute lung injury. Paraquat produces such toxic effects through the generation of the superoxide anion according to one proposed mechanism. The present experiment, methemoglobin formation was demonstrated after incubation of oxyhemoglobin with paraquat. The generation of the superoxide anion through the interaction of oxyhemoglobin with paraquat was suggested by chemiluminescence of luminol. Superoxide dismutase (SOD and catalare inhibited methemoglobin formation. The generation of the superoxide anion is discussed in regard to methemoglobin formation by paraquat.

  16. Challenges in Planet Formation

    CERN Document Server

    Morbidelli, Alessandro

    2016-01-01

    Over the past two decades, large strides have been made in the field of planet formation. Yet fundamental questions remain. Here we review our state of understanding of five fundamental bottlenecks in planet formation. These are: 1) the structure and evolution of protoplanetary disks; 2) the growth of the first planetesimals; 3) orbital migration driven by interactions between proto-planets and gaseous disk; 4) the origin of the Solar System's orbital architecture; and 5) the relationship between observed super-Earths and our own terrestrial planets. Given our lack of understanding of these issues, even the most successful formation models remain on shaky ground.

  17. Manuel UNIMARC format bibliographique

    CERN Document Server

    2007-01-01

    This manual is the French translation of the second edition of UNIMARC Manual: bibliographic format published in English in 1994 and completed by 5 updates published from 1996 to 2005. This 5th French edition is composite. It reproduces identically a part of the 4th edition published in 2002 and, for the fields of the format modified in the Update 5, it offers a new more structured presentation. This is a handbook dedicated to French-speaking users of the UNIMARC format for bibliographic descriptions.

  18. Pictorial Formats. Volume 1. Format Development

    Science.gov (United States)

    1982-02-01

    the pilot to help him evaluate when to change course to avoid objects in TF/TA modes. In addition to the projected flight path, there are commanded...TYPESFigMASTER5 Wepo Saus clr ase 00I 16I AI 󈧋TRA- X PI prI MEN p~ll It 62 AIR-TO-GROUND _ - PRGRAM ýRELEASE SELECTIONS _ZY - Figure 58 71T ý Weapon...development should always be done within the context oF a baseline aircraft weapon system. Further studies are needed to simulate and evaluate these formats

  19. Notes on Star Formation

    CERN Document Server

    Krumholz, Mark R

    2015-01-01

    This book provides an introduction to the field of star formation at a level suitable for graduate students or advanced undergraduates in astronomy or physics. The structure of the book is as follows. The first two chapters begin with a discussion of observational techniques, and the basic phenomenology they reveal. The goal is to familiarize students with the basic techniques that will be used throughout, and to provide a common vocabulary for the rest of the book. The next five chapters provide a similar review of the basic physical processes that are important for star formation. Again, the goal is to provide a basis for what follows. The remaining chapters discuss star formation over a variety of scales, starting with the galactic scale and working down to the scales of individual stars and their disks. The book concludes with a brief discussion of the clearing of disks and the transition to planet formation. The book includes five problem sets, complete with solutions.

  20. FORMATION CONSTANTS AND THERMODYNAMIC ...

    African Journals Online (AJOL)

    has been determined spectrophotometrically for 1:1 complex formation at ... DFT has been extensively used due to their accuracy and low computational cost .... Our input data for analysis of metal-ligand system were absorbance of 50 different.

  1. Collision Induced Galaxy Formation

    CERN Document Server

    Balland, C; Schäffer, R

    1997-01-01

    We present a semi-analytical model in which galaxy collisions and strong tidal interactions, both in the field and during the collapse phase of groups and clusters help determine galaxy morphology. From a semi-analytical analysis based on simulation results of tidal collisions (Aguilar & White 1985), we propose simple rules for energy exchanges during collisions that allow to discriminate between different Hubble types: efficient collisions result in the disruption of disks and substantial star formation, leading to the formation of elliptical galaxies; inefficient collisions allow a large gas reservoir to survive and form disks. Assuming that galaxy formation proceeds in a Omega_0=1 Cold Dark Matter universe, the model both reproduces a number of observations and makes predictions, among which are the redshifts of formation of the different Hubble types in the field. When the model is normalized to the present day abundance of X-ray clusters, the amount of energy exchange needed to produce elliptical gal...

  2. Coalition Formation under Uncertainty

    Science.gov (United States)

    2010-03-01

    Unfortunately, many current approaches to coalition formation lack provi- sions for uncertainty. This prevents application of coalition formation techniques ...should also include mechanisms and processing techniques that provide stabil- ity, scalability, and, at a minimum, optimality relative to agent beliefs...relocate a piano . For the sake of simplicity, assume payment is divided evenly among the participants in the move (i.e., each mover has the same utility or

  3. PCF File Format.

    Energy Technology Data Exchange (ETDEWEB)

    Thoreson, Gregory G [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2017-08-01

    PCF files are binary files designed to contain gamma spectra and neutron count rates from radiation sensors. It is the native format for the GAmma Detector Response and Analysis Software (GADRAS) package [1]. It can contain multiple spectra and information about each spectrum such as energy calibration. This document outlines the format of the file that would allow one to write a computer program to parse and write such files.

  4. Densities and Kinematic Viscosities for the Systems Benzene + Methyl Formate, Benzene + Ethyl Formate, Benzene + Propyl Formate, and Benzene + Butyl Formate

    DEFF Research Database (Denmark)

    Emmerling, Uwe; Rasmussen, Peter

    1998-01-01

    Densities and kinematic viscosities have been measured for the system benzene + methyl formate at 20°C and for the systems benzene + ethyl formate, benzene + propyl formate, and benzene + butyl formate from 20°C to 50°C. The results for the system benzene + methyl formate have been correlated usi...

  5. Formation peculiarities of tourism documentation

    OpenAIRE

    Zhezhnych, Pavlo; Soprunyuk, Oksana

    2013-01-01

    The article describes formation peculiarities of tourism documentation, the role of tourism data consolidation for unified format creation and the the need to use existing software tools to handle tourism information, formation process of tourism documentation is presented.

  6. Situated Formative Feedback

    DEFF Research Database (Denmark)

    Lukassen, Niels Bech; Wahl, Christian; Sorensen, Elsebeth Korsgaard

    2016-01-01

    This study addresses the conceptual challenge of providing students with good quality feedback to enhance student learning in an online community of practice (COP). The aim of the study is to identify feedback mechanisms in a virtual learning environment (VLE) and to create a full formative...... feedback episode (FFE) through an online dialogue. The paper argues that dialogue is crucial for student learning and that feedback is not only something the teacher gives to the student. Viewing good quality feedback as social, situated, formative, emphasis is put on the establishment of dialogue. We...... refer to this type of feedback as, Situated Formative Feedback (SFF). As a basis for exploring, identifying and discussing relevant aspects of SFF the paper analyses qualitative data from a Moodle dialogue. Data are embedded in the qualitative analytic program Nvivo and are analysed with a system...

  7. Forces in strategy formation

    DEFF Research Database (Denmark)

    Steensen, Elmer Fly

    2008-01-01

    This chapter proposes that organizational strategy formation should be characterized theoretically as a process that is subject to several interacting forces, rather than represented by separate discrete decisionmodels or theoretic perspectives, as is commonly done in the strategic management...... literature. Based on an extensive review of relevant theory and empirical work in strategic decision-making, organizational change theory, cognitive and social psychology, and strategy processes, seven kinds of ''forces'' - rational, imposed, teleological, learning, political, heuristic, and social...... - are identified as interacting in and having significant influence on the strategy formation process. It is further argued that by applying a holistic ''forces-view'' of the significant and interacting influences on strategy formation, we can better understand the dynamics and challenges in managing the process...

  8. Meningococcal biofilm formation

    DEFF Research Database (Denmark)

    Lappann, M.; Haagensen, Janus Anders Juul; Claus, H.

    2006-01-01

    We show that in a standardized in vitro flow system unencapsulated variants of genetically diverse lineages of Neisseria meningitidis formed biofilms, that could be maintained for more than 96 h. Biofilm cells were resistant to penicillin, but not to rifampin or ciprofloxacin. For some strains......, microcolony formation within biofilms was observed. Microcolony formation in strain MC58 depended on a functional copy of the pilE gene encoding the pilus subunit pilin, and was associated with twitching of cells. Nevertheless, unpiliated pilE mutants formed biofilms showing that attachment and accumulation......X alleles was identified among genetically diverse meningococcal strains. PilX alleles differed in their propensity to support autoaggregation of cells in suspension, but not in their ability to support microcolony formation within biofilms in the continuous flow system....

  9. Kuiper Binary Object Formation

    CERN Document Server

    Nazzario, R C; Covington, C; Kagan, D; Hyde, T W

    2005-01-01

    It has been observed that binary Kuiper Belt Objects (KBOs) exist contrary to theoretical expectations. Their creation presents problems to most current models. However, the inclusion of a third body (for example, one of the outer planets) may provide the conditions necessary for the formation of these objects. The presence of a third massive body not only helps to clear the primordial Kuiper Belt but can also result in long lived binary Kuiper belt objects. The gravitational interaction between the KBOs and the third body causes one of four effects; scattering into the Oort cloud, collisions with the growing protoplanets, formation of binary pairs, or creation of a single Kuiper belt object. Additionally, the initial location of the progenitors of the Kuiper belt objects also has a significant effect on binary formation.

  10. Primordial Planet Formation

    CERN Document Server

    Schild, Rudolph E

    2010-01-01

    Recent spacecraft observations exploring solar system properties impact standard paradigms of the formation of stars, planets and comets. We stress the unexpected cloud of microscopic dust resulting from the DEEP IMPACT mission, and the existence of molten nodules in STARDUST samples. And the theory of star formation does not explain the common occurrence of binary and multiple star systems in the standard gas fragmentation scenario. No current theory of planet formation can explain the iron core of the earth, under oceans of water. These difficulties are avoided in a scenario where the planet mass objects form primordially and are today the baryonic dark matter. They have been detected in quasar microlensing and anomalous quasar radio brightening bursts. The primordial planets often concentrate together to form a star, with residual matter seen in pre-stellar accretion discs around the youngest stars. These primordial planet mass bodies were formed of hydrogen-helium, aggregated in dense clumps of a trillion...

  11. Meningococcal biofilm formation

    DEFF Research Database (Denmark)

    Lappann, M.; Haagensen, Janus Anders Juul; Claus, H.

    2006-01-01

    We show that in a standardized in vitro flow system unencapsulated variants of genetically diverse lineages of Neisseria meningitidis formed biofilms, that could be maintained for more than 96 h. Biofilm cells were resistant to penicillin, but not to rifampin or ciprofloxacin. For some strains......, microcolony formation within biofilms was observed. Microcolony formation in strain MC58 depended on a functional copy of the pilE gene encoding the pilus subunit pilin, and was associated with twitching of cells. Nevertheless, unpiliated pilE mutants formed biofilms showing that attachment and accumulation......X alleles was identified among genetically diverse meningococcal strains. PilX alleles differed in their propensity to support autoaggregation of cells in suspension, but not in their ability to support microcolony formation within biofilms in the continuous flow system....

  12. Syntactic Formats for Free

    DEFF Research Database (Denmark)

    Klin, Bartek; Sobocinski, Pawel

    2003-01-01

    A framework of Plotkin and Turi’s, originally aimed at providing an abstract notion of bi-simulation, is modified to cover other operational equivalences and preorders. Combined with bi-algebraic methods, it yields a technique for the derivation of syntactic formats for transition system specific......A framework of Plotkin and Turi’s, originally aimed at providing an abstract notion of bi-simulation, is modified to cover other operational equivalences and preorders. Combined with bi-algebraic methods, it yields a technique for the derivation of syntactic formats for transition system...... specifications which guarantee operational preorders to be precongruences. The technique is applied to the trace preorder, the completed trace pre order and the failures preorder. In the latter two cases, new syntactic formats ensuring precongruence properties are introduced....

  13. The format of things

    DEFF Research Database (Denmark)

    Jørnø, Rasmus Leth

    or surpasses speech and writing. The well from which we draw our design ideas for novel interfaces is therefore needlessly restricted by a format that has outlived its purpose. The objective of the thesis is to dismantle the format of things as well as to sketch out novel paths of inquiry for new interfaces...... ontological biases and epistemological assumptions which, to a great extent, delimit what can be thought about interfaces and shorten the imaginative horizon. The objective of this thesis is to break the hegemony of a particular type of understanding of the world and interfaces, and to make new approaches...

  14. Isolating Triggered Star Formation

    Energy Technology Data Exchange (ETDEWEB)

    Barton, Elizabeth J.; Arnold, Jacob A.; /UC, Irvine; Zentner, Andrew R.; /KICP, Chicago /Chicago U., EFI; Bullock, James S.; /UC, Irvine; Wechsler, Risa H.; /KIPAC, Menlo

    2007-09-12

    Galaxy pairs provide a potentially powerful means of studying triggered star formation from galaxy interactions. We use a large cosmological N-body simulation coupled with a well-tested semi-analytic substructure model to demonstrate that the majority of galaxies in close pairs reside within cluster or group-size halos and therefore represent a biased population, poorly suited for direct comparison to 'field' galaxies. Thus, the frequent observation that some types of galaxies in pairs have redder colors than 'field' galaxies is primarily a selection effect. We use our simulations to devise a means to select galaxy pairs that are isolated in their dark matter halos with respect to other massive subhalos (N= 2 halos) and to select a control sample of isolated galaxies (N= 1 halos) for comparison. We then apply these selection criteria to a volume-limited subset of the 2dF Galaxy Redshift Survey with M{sub B,j} {le} -19 and obtain the first clean measure of the typical fraction of galaxies affected by triggered star formation and the average elevation in the star formation rate. We find that 24% (30.5 %) of these L* and sub-L* galaxies in isolated 50 (30) h{sup -1} kpc pairs exhibit star formation that is boosted by a factor of {approx}> 5 above their average past value, while only 10% of isolated galaxies in the control sample show this level of enhancement. Thus, 14% (20 %) of the galaxies in these close pairs show clear triggered star formation. Our orbit models suggest that 12% (16%) of 50 (30) h{sup -1} kpc close pairs that are isolated according to our definition have had a close ({le} 30 h{sup -1} kpc) pass within the last Gyr. Thus, the data are broadly consistent with a scenario in which most or all close passes of isolated pairs result in triggered star formation. The isolation criteria we develop provide a means to constrain star formation and feedback prescriptions in hydrodynamic simulations and a very general method of understanding

  15. Sensitivity Data File Formats

    Energy Technology Data Exchange (ETDEWEB)

    Rearden, Bradley T. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2016-04-01

    The format of the TSUNAMI-A sensitivity data file produced by SAMS for cases with deterministic transport solutions is given in Table 6.3.A.1. The occurrence of each entry in the data file is followed by an identification of the data contained on each line of the file and the FORTRAN edit descriptor denoting the format of each line. A brief description of each line is also presented. A sample of the TSUNAMI-A data file for the Flattop-25 sample problem is provided in Figure 6.3.A.1. Here, only two profiles out of the 130 computed are shown.

  16. Formation of Saturn's spokes

    Science.gov (United States)

    Goertz, C. K.

    1984-01-01

    The theoretical requirements of the Goertz and Morfill (1983) model of the formation of spokes in the rings of Saturn are analyzed. Consideration is given to model predictions of dust particle size distribution, the optical depth of the spokes, and the radial speed of spoke evolution. It is shown that the electrostatic levitation of singly charged dust particles would be sufficient to cause the spokes to form. The maximum formation time for spokes of more than 10,000 km radial length is estimated to be less than five minutes. Observations of the scattering properties of the spokes showed general agreement with the theoretical calculations.

  17. The formation of stars

    CERN Document Server

    Stahler, Steven W

    2008-01-01

    This book is a comprehensive treatment of star formation, one of the most active fields of modern astronomy. The reader is guided through the subject in a logically compelling manner. Starting from a general description of stars and interstellar clouds, the authors delineate the earliest phases of stellar evolution. They discuss formation activity not only in the Milky Way, but also in other galaxies, both now and in the remote past. Theory and observation are thoroughly integrated, with the aid of numerous figures and images. In summary, this volume is an invaluable resource, both as a text f

  18. Tea aroma formation

    Directory of Open Access Journals (Sweden)

    Chi-Tang Ho

    2015-03-01

    Full Text Available Besides water, tea is one of the most popular beverages around the world. The chemical ingredients and biological activities of tea have been summarized recently. The current review summarizes tea aroma compounds and their formation in green, black, and oolong tea. The flavor of tea can be divided into two categories: taste (non-volatile compounds and aroma (volatile compounds. All of these aroma molecules are generated from carotenoids, lipids, glycosides, etc. precursors, and also from Maillard reaction. In the current review, we focus on the formation mechanism of main aromas during the tea manufacturing process.

  19. Shape formation algorithm

    OpenAIRE

    2016-01-01

    This project concerns the implementation of a decentralized algorithm for shape formation. The first idea was to test this algorithm with a swarm of autonomous drones but, due to the lack of time and the complexity of the project, the work was just developed in 2D and in simulation.

  20. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted

  1. PAHs and star formation

    NARCIS (Netherlands)

    Tielens, AGGM; Peeters, E; Bakes, ELO; Spoon, HWW; Hony, S; Johnstone, D; Adams, FC; Lin, DNC; Neufeld, DA; Ostriker, EC

    2004-01-01

    Strong IR emission features at 3.3, 6.2, 7.7, 8.6, and 11.2 mum are a common characteristic of regions of massive star formation. These features are carried by large (similar to 50 C-atom) Polycyclic Aromatic Hydrocarbon molecules which are pumped by the strong FUV photon flux from these stars. Thes

  2. BISAC Variable Format.

    Science.gov (United States)

    Information Technology and Libraries, 1983

    1983-01-01

    Presents revision of Book Industry Systems Advisory Committee (BISAC) format designed specifically for electronic transmission of purchase orders for monograph or series titles combining fixed and variable length data fields which was approved in January 1983. Special characters, sample address descriptions, summary of fixed records, glossary, and…

  3. Kepler Planet Formation

    Science.gov (United States)

    Lissauer, Jack J.

    2015-01-01

    Kepler has vastly increased our knowledge of planets and planetary systems located close to stars. The new data shows surprising results for planetary abundances, planetary spacings and the distribution of planets on a mass-radius diagram. The implications of these results for theories of planet formation will be discussed.

  4. Determinants for gallstone formation

    DEFF Research Database (Denmark)

    Shabanzadeh, Daniel Monsted; Sorensen, Lars Tue; Jørgensen, Torben

    2016-01-01

    associations were found for blood pressure, smoking, alcohol consumption, HDL cholesterol, or triglycerides in meta-analyses. Conclusions: Age, female sex, BMI, non-HDL cholesterol, and polyps are independent determinants for gallstone formation. Incident gallstones and the metabolic syndrome share common risk...

  5. Cosmic structure formation

    Science.gov (United States)

    Bertschinger, Edumund

    1994-01-01

    This article reviews the prevailing paradigm for how galaxies and larger structures formed in the universe: gravitational instability. Basic observational facts are summarized to motivate the standard cosmological framework underlying most detailed investigations of structure formation. The observed univers approaches spatial uniformity on scales larger than about 10(exp 26) cm. On these scales gravitational dynamics is almost linear and therefore relatively easy to relate to observations of large-scale structure. On smaller scales cosmic structure is complicated not only by nonlinear gravitational clustering but also by nonlinear nongravitational gas dynamical processes. The complexity of these phenomena makes galaxy formation one of the grand challenge problems of the physical sciences. No fully satisfactory theory can presently account in detail for the observed cosmic structure. However, as this article summarizes, significant progress has been made during the last few years.

  6. Formation of bacterial nanocells

    Science.gov (United States)

    Vainshtein, Mikhail; Kudryashova, Ekaterina; Suzina, Natalia; Ariskina, Elena; Voronkov, Vadim

    1998-07-01

    Existence of nanobacteria received increasing attention both in environmental microbiology/geomicro-biology and in medical microbiology. In order to study a production of nanoforms by typical bacterial cells. Effects of different physical factors were investigated. Treatment of bacterial cultures with microwave radiation, or culturing in field of electric current resulted in formation a few types of nanocells. The number and type of nanoforms were determined with type and dose of the treatment. The produced nanoforms were: i) globules, ii) clusters of the globules--probably produced by liaison, iii) nanocells coated with membrane. The viability of the globules is an object opened for doubts. The nanocells discovered multiplication and growth on solidified nutrient media. The authors suggest that formation of nanocells is a common response of bacteria to stress-actions produced by different agents.

  7. Un dilemme de formation

    OpenAIRE

    Fields, Marjorie; Marvel, David

    2013-01-01

    Le Master of Art in Teaching prépare à l’enseignement dans l’État de l’Alaska en un an. Les candidats doivent faire preuve d’un bon niveau dans leur discipline pour avoir accès à la formation qui comprend des études théoriques et des stages. Un système d’évaluation de l’enseignant stagiaire et de l’enseignant en fonction permet d’améliorer et de faire évoluer constamment cette formation. Les objectifs de compétence présentés étonneront plus d’un lecteur européen. The Master of Arts in Teac...

  8. Emptiness Formation Probability

    Science.gov (United States)

    Crawford, Nicholas; Ng, Stephen; Starr, Shannon

    2016-08-01

    We present rigorous upper and lower bounds on the emptiness formation probability for the ground state of a spin-1/2 Heisenberg XXZ quantum spin system. For a d-dimensional system we find a rate of decay of the order {exp(-c L^{d+1})} where L is the sidelength of the box in which we ask for the emptiness formation event to occur. In the {d=1} case this confirms previous predictions made in the integrable systems community, though our bounds do not achieve the precision predicted by Bethe ansatz calculations. On the other hand, our bounds in the case {d ≥ 2} are new. The main tools we use are reflection positivity and a rigorous path integral expansion, which is a variation on those previously introduced by Toth, Aizenman-Nachtergaele and Ueltschi.

  9. Simulating Cosmic Structure Formation

    CERN Document Server

    Weinberg, D H; Hernquist, L E; Weinberg, David H.; Katz, Neal; Hernquist, Lars

    1997-01-01

    We describe cosmological simulation techniques and their application to studies of cosmic structure formation, with particular attention to recent hydrodynamic simulations of structure in the high redshift universe. Collisionless N-body simulations with Gaussian initial conditions produce a pattern of sheets, filaments, tunnels, and voids that resembles the observed large scale galaxy distribution. Simulations that incorporate gas dynamics and dissipation form dense clumps of cold gas with sizes and masses similar to the luminous parts of galaxies. Models based on inflation and cold dark matter predict a healthy population of high redshift galaxies, including systems with star formation rates of 20 M_{\\sun}/year at z=6. At z~3, most of the baryons in these models reside in the low density intergalactic medium, which produces fluctuating Lyman-alpha absorption in the spectra of background quasars. The physical description of this ``Lyman-alpha forest'' is particularly simple if the absorption spectrum is viewe...

  10. Formatting Design Dialogues

    DEFF Research Database (Denmark)

    Brandt, Eva; Binder, Thomas; Messeter, Jörn

    2008-01-01

    in collaborative settings and finally we examine the board game as a particularly interesting game format. In the second part of the article we present and discuss two board games: the User Game and the Landscape Game. We show how these games respond to particular challenges, and how they have interesting......This article discusses design games as a particular genre for formatting design dialogues. In the first part of the article we review the participatory design literature for game-oriented framings of co-design. We look at what constitutes game and play, we discuss other authors’ use of games...... characteristics in being both ‘as-if’ worlds to explore and shared representations of what the players accomplish. In the last section of the article we discuss how new games may be designed and played and what makes a good design game....

  11. Situated Formative Feedback

    DEFF Research Database (Denmark)

    Lukassen, Niels Bech; Wahl, Christian; Sorensen, Elsebeth Korsgaard

    2016-01-01

    feedback episode (FFE) through an online dialogue. The paper argues that dialogue is crucial for student learning and that feedback is not only something the teacher gives to the student. Viewing good quality feedback as social, situated, formative, emphasis is put on the establishment of dialogue. We...... refer to this type of feedback as, Situated Formative Feedback (SFF). As a basis for exploring, identifying and discussing relevant aspects of SFF the paper analyses qualitative data from a Moodle dialogue. Data are embedded in the qualitative analytic program Nvivo and are analysed with a system...... theoretical textual analysis method. Asynchronous written dialogue from an online master’s course at Aalborg University forms the empirical basis of the study. The findings suggests in general that students play an essential role in SFF and that students and educators are equal in the COP, but holds different...

  12. Kuiper Binary Object Formation

    OpenAIRE

    Nazzario, R. C.; Orr, K.; Covington, C.; Kagan, D.; Hyde, T. W.

    2005-01-01

    It has been observed that binary Kuiper Belt Objects (KBOs) exist contrary to theoretical expectations. Their creation presents problems to most current models. However, the inclusion of a third body (for example, one of the outer planets) may provide the conditions necessary for the formation of these objects. The presence of a third massive body not only helps to clear the primordial Kuiper Belt but can also result in long lived binary Kuiper belt objects. The gravitational interaction betw...

  13. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet age:

  14. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet

  15. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet

  16. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet age:

  17. Formate-assisted pyrolysis

    Science.gov (United States)

    DeSisto, William Joseph; Wheeler, Marshall Clayton; van Heiningen, Adriaan R. P.

    2015-03-17

    The present invention provides, among other thing, methods for creating significantly deoxygenated bio-oils form biomass including the steps of providing a feedstock, associating the feedstock with an alkali formate to form a treated feedstock, dewatering the treated feedstock, heating the dewatered treated feedstock to form a vapor product, and condensing the vapor product to form a pyrolysis oil, wherein the pyrolysis oil contains less than 30% oxygen by weight.

  18. Frost formation with salt

    OpenAIRE

    Guadarrama-Cetina, J.; Mongruel, A; González-Viñas, W; Beysens, D. A.

    2015-01-01

    The formation of frost in presence of salt (NaCl) crystal is experimentally investigated on a hydrophobic surface. It presents several remarkable features due to the interplay of salty-water saturation pressure evolution, initially lower than the saturation pressure of ice and water, and the percolating propagation of ice dendrites from defects throughout the supercooled water droplet pattern. In particular, it is remarkable that nucleation of supercooled water and/or ice is prevented around ...

  19. Formate-assisted pyrolysis

    Energy Technology Data Exchange (ETDEWEB)

    DeSisto, William Joseph; Wheeler, Marshall Clayton; van Heiningen, Adriaan R. P.

    2015-03-17

    The present invention provides, among other thing, methods for creating significantly deoxygenated bio-oils form biomass including the steps of providing a feedstock, associating the feedstock with an alkali formate to form a treated feedstock, dewatering the treated feedstock, heating the dewatered treated feedstock to form a vapor product, and condensing the vapor product to form a pyrolysis oil, wherein the pyrolysis oil contains less than 30% oxygen by weight.

  20. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2012-01-01

    <正>The format for citations in text and for bibliographic references follows GB/T 7714—2005.The citation should be ordered in number as it appears in the text of the submitted article.For journal article Sun,Y.,Li,B.,&Qu,J.F.Design and implementation of library intelligent IM reference robot.New Technology of Library and Information Service(in Chinese),2011,205:88–92.

  1. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2014-01-01

    <正>The format for citations in text and for bibliographic references follows GB/T 7714—2005.The citation should be ordered in number as it appears in the text of the submitted article.For journal article Sun,Y.,Li,B.,&Qu,J.F.Design and implementation of library intelligent IM reference robot.New Technology of Library and Information Service(in Chinese),

  2. Understanding Alliance Formation Patterns

    Science.gov (United States)

    2015-12-01

    agreement to open international markets because trade produces security externalities.”131 Gowa explains the necessity to maintain trade among allies by...alone.”135 They present empirical evidence to “ indicate that allies conduct more trade than do non-allies and that the formation of alliances tends to...states to control their trade flows.”138 Morrow et al. indicate that “joint democracy and the 133

  3. Galaxy Formation and Evolution

    Science.gov (United States)

    Nagamine, Kentaro; Reddy, Naveen; Daddi, Emanuele; Sargent, Mark T.

    2016-07-01

    In this chapter, we discuss the current status of observational and computational studies on galaxy formation and evolution. In particular, a joint analysis of star-formation rates (SFRs), stellar masses, and metallicities of galaxies throughout cosmic time can shed light on the processes by which galaxies build up their stellar mass and enrich the environment with heavy elements. Comparison of such observations and the results of numerical simulations can give us insights on the physical importance of various feedback effects by supernovae and active galactic nuclei. In Sect. 1, we first discuss the primary methods used to deduce the SFRs, stellar masses, and (primarily) gas-phase metallicities in high-redshift galaxies. Then, we show how these quantities are related to each other and evolve with time. In Sect. 2, we further examine the distribution of SFRs in galaxies following the `Main Sequence' paradigm. We show how the so-called `starbursts' display higher specific SFRs and SF efficiencies by an order of magnitude. We use this to devise a simple description of the evolution of the star-forming galaxy population since z ˜3 that can successfully reproduce some of the observed statistics in the infrared (IR) wavelength. We also discuss the properties of molecular gas. In Sect. 3, we highlight some of the recent studies of high-redshift galaxy formation using cosmological hydrodynamic simulations. We discuss the physical properties of simulated galaxies such as luminosity function and escape fraction of ionizing photons, which are important statistics for reionization of the Universe. In particular the escape fraction of ionizing photons has large uncertainties, and studying gamma-ray bursts (which is the main topic of this conference) can also set observational constraints on this uncertain physical parameter as well as cosmic star formation rate density.

  4. Tritiated ammonia formation

    Energy Technology Data Exchange (ETDEWEB)

    Heung, L.K.

    1994-03-01

    A rate equation that closely simulates experimental data has been developed. this rate equation can be used to calculate the formation of tritiated ammonia from different concentrations of tritium and nitrogen. The reaction of T{sub 2} and N{sub 2} to form NT{sub 3} is a slow process, particularly when the tritium concentration is low. The reaction requires weeks or months to reach equilibrium dependent on the concentrations of the reactants.

  5. Formation of transient lamellipodia.

    Directory of Open Access Journals (Sweden)

    Juliane Zimmermann

    Full Text Available Cell motility driven by actin polymerization is pivotal to the development and survival of organisms and individual cells. Motile cells plated on flat substrates form membrane protrusions called lamellipodia. The protrusions repeatedly appear and retract in all directions. If a lamellipodium is stabilized and lasts for some time, it can take over the lead and determine the direction of cell motion. Protrusions traveling along the cell perimeter have also been observed. Their initiation is in some situations the effect of the dynamics of the pathway linking plasma membrane receptors to actin filament nucleation, e.g. in chemotaxis. However, lamellipodia are also formed in many cells incessantly during motion with a constant state of the signaling pathways upstream from nucleation promoting factors (NPFs, or spontaneously in resting cells. These observations strongly suggest protrusion formation can also be a consequence of the dynamics downstream from NPFs, with signaling setting the dynamic regime but not initiating the formation of individual protrusions. A quantitative mechanism for this kind of lamellipodium dynamics has not been suggested yet. Here, we present a model exhibiting excitable actin network dynamics. Individual lamellipodia form due to random supercritical filament nucleation events amplified by autocatalytic branching. They last for about 30 seconds to many minutes and are terminated by filament bundling, severing and capping. We show the relevance of the model mechanism for experimentally observed protrusion dynamics by reproducing in very good approximation the repetitive protrusion formation measured by Burnette et al. with respect to the velocities of leading edge protrusion and retrograde flow, oscillation amplitudes, periods and shape, as well as the phase relation between protrusion and retrograde flow. Our modeling results agree with the mechanism of actin bundle formation during lamellipodium retraction suggested by

  6. Formation of transient lamellipodia.

    Science.gov (United States)

    Zimmermann, Juliane; Falcke, Martin

    2014-01-01

    Cell motility driven by actin polymerization is pivotal to the development and survival of organisms and individual cells. Motile cells plated on flat substrates form membrane protrusions called lamellipodia. The protrusions repeatedly appear and retract in all directions. If a lamellipodium is stabilized and lasts for some time, it can take over the lead and determine the direction of cell motion. Protrusions traveling along the cell perimeter have also been observed. Their initiation is in some situations the effect of the dynamics of the pathway linking plasma membrane receptors to actin filament nucleation, e.g. in chemotaxis. However, lamellipodia are also formed in many cells incessantly during motion with a constant state of the signaling pathways upstream from nucleation promoting factors (NPFs), or spontaneously in resting cells. These observations strongly suggest protrusion formation can also be a consequence of the dynamics downstream from NPFs, with signaling setting the dynamic regime but not initiating the formation of individual protrusions. A quantitative mechanism for this kind of lamellipodium dynamics has not been suggested yet. Here, we present a model exhibiting excitable actin network dynamics. Individual lamellipodia form due to random supercritical filament nucleation events amplified by autocatalytic branching. They last for about 30 seconds to many minutes and are terminated by filament bundling, severing and capping. We show the relevance of the model mechanism for experimentally observed protrusion dynamics by reproducing in very good approximation the repetitive protrusion formation measured by Burnette et al. with respect to the velocities of leading edge protrusion and retrograde flow, oscillation amplitudes, periods and shape, as well as the phase relation between protrusion and retrograde flow. Our modeling results agree with the mechanism of actin bundle formation during lamellipodium retraction suggested by Burnette et al. and

  7. Tea aroma formation

    OpenAIRE

    Chi-Tang Ho; Xin Zheng; Shiming Li

    2015-01-01

    Besides water, tea is one of the most popular beverages around the world. The chemical ingredients and biological activities of tea have been summarized recently. The current review summarizes tea aroma compounds and their formation in green, black, and oolong tea. The flavor of tea can be divided into two categories: taste (non-volatile compounds) and aroma (volatile compounds). All of these aroma molecules are generated from carotenoids, lipids, glycosides, etc. precursors, and also from Ma...

  8. The Star Formation Camera

    CERN Document Server

    Scowen, Paul A; Beasley, Matthew; Calzetti, Daniela; Desch, Steven; Fullerton, Alex; Gallagher, John; Lisman, Doug; Macenka, Steve; Malhotra, Sangeeta; McCaughrean, Mark; Nikzad, Shouleh; O'Connell, Robert; Oey, Sally; Padgett, Deborah; Rhoads, James; Roberge, Aki; Siegmund, Oswald; Shaklan, Stuart; Smith, Nathan; Stern, Daniel; Tumlinson, Jason; Windhorst, Rogier; Woodruff, Robert

    2009-01-01

    The Star Formation Camera (SFC) is a wide-field (~15'x19, >280 arcmin^2), high-resolution (18x18 mas pixels) UV/optical dichroic camera designed for the Theia 4-m space-borne space telescope concept. SFC will deliver diffraction-limited images at lambda > 300 nm in both a blue (190-517nm) and a red (517-1075nm) channel simultaneously. Our aim is to conduct a comprehensive and systematic study of the astrophysical processes and environments relevant for the births and life cycles of stars and their planetary systems, and to investigate and understand the range of environments, feedback mechanisms, and other factors that most affect the outcome of the star and planet formation process. This program addresses the origins and evolution of stars, galaxies, and cosmic structure and has direct relevance for the formation and survival of planetary systems like our Solar System and planets like Earth. We present the design and performance specifications resulting from the implementation study of the camera, conducted ...

  9. Formation of Lunar Swirls

    CERN Document Server

    Bamford, R A; Cruz, F; Kellett, B J; Fonseca, R A; Silva, L O; Trines, R M G M; Halekas, J S; Kramer, G; Harnett, E; Cairns, R A; Bingham, R

    2015-01-01

    In this paper we show a plausible mechanism that could lead to the formation of the Dark Lanes in Lunar Swirls, and the electromagnetic shielding of the lunar surface that results in the preservation of the white colour of the lunar regolith. We present the results of a fully self-consistent 2 and 3 dimensional particle-in-cell simulations of mini-magnetospheres that form above the lunar surface and show that they are consistent with the formation of `lunar swirls' such as the archetypal formation Reiner Gamma. The simulations show how the microphysics of the deflection/shielding of plasma operates from a kinetic-scale cavity, and show that this interaction leads to a footprint with sharp features that could be the mechanism behind the generation of `dark lanes'. The physics of mini-magnetospheres is described and shown to be controlled by space-charge fields arising due to the magnetized electrons and unmagnetized ions. A comparison between model and observation is shown for a number of key plasma parameters...

  10. Bouyei word formation

    Directory of Open Access Journals (Sweden)

    Attasith Boonsawasd

    2012-12-01

    Full Text Available The Bouyei language is divided into three vernaculars, the southern vernacular, the central vernacular and the southwestern vernacular. This paper aims to describe the lexicology of the southern vernacular of the Bouyei language focusing on word formation process. Bouyei words are formed by affixing, compounding and reduplicating. First, the affixation consists of prefixing and suffixing. Infixing is not found in this language. Second, the compound is divided into the semantic and syntactic compound. Finally, the reduplication is divided into the simple and complex reduplication. The simple reduplication is normally used to emphasize the meaning of the root or to indicate plurality.

  11. Formation control of AAUSHIP

    DEFF Research Database (Denmark)

    Østergaard, Nick; Dam, Jeppe; Larsen, Jesper Abildgaard

    2015-01-01

    Many maritime mapping tasks are today carried out by large research ships, which are very costly to operate. As a way to overcome this, a number of small surveying vessels have been developed called AAUSHIP. In order to efficiently map the an area with such smaller vessels, it is important that s...... that several vessels are able to corporate on the task at hand. In this paper, the developed formation control strategy for the AAUSHIP series of vessels is presented, along with simulation results, which confirms, that the algorithm works as intended....

  12. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet age:A citation analysis of computer science literature.Information Processing and Manage-

  13. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet age:A citation analysis of computer science literature.Information Processing and Management,2001,37:661-675.2 Fernandez.M

  14. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5th Ed.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet age:A citation analysis of computer science literature.Information Processing and Management,2001,37:661-675.

  15. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet age:A citation analysis of computer science literature.Information Processing and Management,2001,37:661-675.2 Fernandez,M.,Kadiyska,Y.,&Suciu,D.,et al.SilkRoute:A framework for publishing

  16. Formation control of AAUSHIP

    DEFF Research Database (Denmark)

    Østergaard, Nick; Dam, Jeppe; Larsen, Jesper Abildgaard

    2015-01-01

    Many maritime mapping tasks are today carried out by large research ships, which are very costly to operate. As a way to overcome this, a number of small surveying vessels have been developed called AAUSHIP. In order to efficiently map the an area with such smaller vessels, it is important that s...... that several vessels are able to corporate on the task at hand. In this paper, the developed formation control strategy for the AAUSHIP series of vessels is presented, along with simulation results, which confirms, that the algorithm works as intended....

  17. The formation of life

    CERN Document Server

    Kurucz, R L

    2000-01-01

    The formation of life is an automatic stage in the consolidation of rocky or "terrestrial" planets. The organic (=carbonaceous) matter, light elements, gases, and water must "float" toward the surface and the heavier metals must sink toward the center. Random processes in the molecular soup that fills microfractures in unmelted crust eventually produce self-replicating microtubules. In an appendix I suggest that some primordial crust remains because there is not enough consolidation energy to melt the whole planet. Energy is lost when iron planetesimals first partially melt and then coalesce to form the molten iron planetary core. Stony planetesimals accrete onto the surface of an already consolidated core.

  18. Copper excess impairs mobilization of storage proteins in bean cotyledons.

    Science.gov (United States)

    Karmous, Inès; El Ferjani, Ezzedine; Chaoui, Abdelilah

    2011-12-01

    Germination represents a limiting stage of plant life cycle. One of the underlying metabolic activities following imbibition of seed is the reserve mobilization. Seeds of bean (Phaseolus vulgaris L. var. soisson nain hatif) were germinated by soaking in distilled water or 200 μM CuCl(2). Storage proteins breakdown and amino acids freeing from reserve tissues were investigated. Compared to the control, Cu caused a reduction in germination rate, embryo growth, and in mobilization of cotyledonary biomass. The failure in albumin and globulin hydrolysis after the exposure to the pollutant was argued by (1) higher contents of remaining proteins than control ones, (2) persistence of some polypeptide bands resolved by polyacrylamide gel electrophoresis of albumin and globulin-rich fractions, and (3) decrease in the availability of amino acids. Nitrogen starvation in embryonic axis should be associated with the Cu-imposed delay in growth.

  19. Star Formation in Irregular Galaxies.

    Science.gov (United States)

    Hunter, Deidre; Wolff, Sidney

    1985-01-01

    Examines mechanisms of how stars are formed in irregular galaxies. Formation in giant irregular galaxies, formation in dwarf irregular galaxies, and comparisons with larger star-forming regions found in spiral galaxies are considered separately. (JN)

  20. Parametrising Star Formation Histories

    CERN Document Server

    Simha, Vimal; Conroy, Charlie; Dave, Romeel; Fardal, Mark; Katz, Neal; Oppenheimer, Benjamin D

    2014-01-01

    We examine the star formation histories (SFHs) of galaxies in smoothed particle hydrodynamics (SPH) simulations, compare them to parametric models that are commonly used in fitting observed galaxy spectral energy distributions, and examine the efficacy of these parametric models as practical tools for recovering the physical parameters of galaxies. The commonly used tau-model, with SFR ~ exp(-t/tau), provides a poor match to the SFH of our SPH galaxies, with a mismatch between early and late star formation that leads to systematic errors in predicting colours and stellar mass-to-light ratios. A one-parameter lin-exp model, with SFR ~ t*exp(-t/tau), is much more successful on average, but it fails to match the late-time behavior of the bluest, most actively star-forming galaxies and the passive, "red and dead" galaxies. We introduce a 4-parameter model, which transitions from lin-exp to a linear ramp after a transition time, which describes our simulated galaxies very well. We test the ability of these paramet...

  1. Satellite formation. II

    Science.gov (United States)

    Harris, A. W.

    1978-01-01

    A satellite formation model is extended to include evolution of planetary ring material and elliptic orbital motion. In this model the formation of the moon begins at a later time in the growth of the earth, and a significant fraction of the lunar material is processed through a circumterrestrial debris cloud where volatiles might have been lost. Thus, the chemical differences between the earth and moon are more plausibly accounted for. Satellites of the outer planets probably formed in large numbers throughout the growth of those planets. Because of rapid inward evolution of the orbits of small satellites, the present satellite systems represent only satellites formed in the last few percent of the growths of their primaries. The rings of Saturn and Uranus are most plausibly explained as the debris of satellites disrupted within the Roche limit. Because such a ring would collapse onto the planet in the course of any significant further accretion by the planet, the rings must have formed very near or even after the conclusion of accretion.

  2. Explosions during galaxy formation

    Directory of Open Access Journals (Sweden)

    Hugo Martel

    2001-01-01

    Full Text Available As an idealized model of the e ects of energy release by supernovae during galaxy formation, we consider an explosion at the center of a halo which forms at the intersection of laments in the plane of a cosmological pancake by gravitational instability during pancake collapse. Such halos resemble the virialized objects found in N{body simulations in a CDM universe and, therefore, serve as a convenient, scale{free test{bed model for galaxy formation. ASPH=P3M simulations reveal that such explosions are anisotropic. The energy and metals are channeled into the low density regions, away from the pancake plane. The pancake remains essentially undisturbed, even if the explosion is strong enough to blow away all the gas lo- cated inside the halo at the onset of the explosion and reheat the IGM surrounding the pancake. Infall quickly replenishes this ejected gas and gradually restores the gas fraction as the halo mass continues to grow. Estimates of the collapse epoch and SN energy{release for galaxies of di erent mass in the CDM model can re- late these results to scale{dependent questions of blow{out and blow{away and their implication for early IGM heating and metal enrichment and the creation of dark{matter{dominated dwarf galaxies.

  3. Formation of water bells

    Science.gov (United States)

    Ybert, Christophe; Clanet, Christophe; Bocquet, Lyderic; Duez, Cyril

    2007-11-01

    We study experimentally the situation that consist in a liquid jet impacting normally onto a fixed solid disk. Depending on the experimental conditions, the thin liquid film that spreads onto the solid surface can either pour along the surface, or detach form the disk and form a so-called water bell. The dynamics and the stability of such bells as a function of the hydrodynamic parameters such as the jet and disk diameters or the jet velocity, have already been the object of detailed characterization [1]. This experiment of bell formation appears as the symmetric situation compared to that of a solid body impacting a quiescent liquid. In the latter case, it was recently shown [2] that despite large Re and We numbers, the solid surface characteristics were dramatically influencing the impact scenario. In the present study, we consequently revisit this problem of water bell formation by systematically varying the solid surface characteristics (roughness, surface properties, etc.). It is shown here again that surface parameters strongly influence the domain of bell existence. Our measurements are rationalized by a subtle balance between inertia versus capillary forces and wetting contributions on the liquid film in the ejection region. [1] C. Clanet, J. Fluid Mech., 430, 111-147 (2001) [2] C. Duez et al., Nature Physics, 3, 180-183 (2007)

  4. On Formations with Shemetkov Condition

    Institute of Scientific and Technical Information of China (English)

    Wenbin Guo; Lujin Zhu

    2002-01-01

    A subgroup-closed formation F is called a formation with Shemetkov condition if every minimal non-F-group is either a group of prime order or a Schmidt group. In this paper, we give a necessary and sufficient condition for formations with Shemetkov condition. From this, some known important results follow.

  5. Designing for informed group formation

    DEFF Research Database (Denmark)

    Nicolajsen, Hanne Westh; Juel Jacobsen, Alice; Riis, Marianne

    2012-01-01

    A new design ―project preparation‖ preparing for the group formation in problem based project work is proposed and investigated. The main problem is to overcome group formation based on existing relations. The hypothesis is that theme development and group formation are somewhat counterproductive...

  6. Synapse formation and remodeling

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Synapses are specialized structures that mediate information flow between neurons and target cells,and thus are the basis for neuronal system to execute various functions,including learning and memory.There are around 1011 neurons in the human brain,with each neuron receiving thousands of synaptic inputs,either excitatory or inhibitory.A synapse is an asymmetric structure that is composed of pre-synaptic axon terminals,synaptic cleft,and postsynaptic compartments.Synapse formation involves a number of cell adhesion molecules,extracellular factors,and intracellular signaling or structural proteins.After the establishment of synaptic connections,synapses undergo structural or functional changes,known as synaptic plasticity which is believed to be regulated by neuronal activity and a variety of secreted factors.This review summarizes recent progress in the field of synapse development,with particular emphasis on the work carried out in China during the past 10 years(1999-2009).

  7. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet age:A citation analysis of computer science literature.Information Processing and Management,2001,37:661-675.2 Fernandez,M.,Kadiyska,Y.,&Suciu,D.,et al.SilkRoute:A framework for publishing relational data in XML.ACM Transactions on Database Systems,2002,27(4):438-493.

  8. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet age:A citation analysis of computer science literature.Information Processing and Management,2001,37:661-675.2 Fernandez,M.,Kadiyska,Y.,&Suciu,D.,et al.SilkRoute:A framework for publishing relational data in XML.ACM Transactions on Database Systems,2002,27(4):438-493.

  9. Reference Citation Format

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    <正>The format for citations in text and for bibliographic references follows the Publication Manual of the American Psychological Association(5thEd.,2001)and GB/T 7714-2005.The citation of printed word should be ordered in number as it appears in the text of the submitted article.For journal article1 Goodrum,A.A.,McCain,K.W.,&Lawrence,S.,et al.Scholarly publishing in the Internet age:A citation analysis of computer science literature.Information Processing and Management,2001,37:661-675.2 Fernandez,M.,Kadiyska,Y.,&Suciu,D.,et al.SilkRoute:A framework for publishing relational data in XML.ACM Transactions on Database Systems,2002,27(4):438-493.

  10. Myxobacteria Fruiting Body Formation

    Science.gov (United States)

    Jiang, Yi

    2006-03-01

    Myxobacteria are social bacteria that swarm and glide on surfaces, and feed cooperatively. When starved, tens of thousands of cells change their movement pattern from outward spreading to inward concentration; they form aggregates that become fruiting bodies, inside which cells differentiate into nonmotile, environmentally resistant spores. Traditionally, cell aggregation has been considered to imply chemotaxis, a long-range cell interaction mediated by diffusing chemicals. However, myxobacteria aggregation is the consequence of direct cell-contact interactions. I will review our recent efforts in modeling the fruiting body formation of Myxobacteria, using lattice gas cellular automata models that are based on local cell-cell contact signaling. These models have reproduced the individual phases in Myxobacteria development such as the rippling, streaming, early aggregation and the final sporulation; the models can be unified to simulate the whole developmental process of Myxobacteria.

  11. Nuclear Pasta Formation

    CERN Document Server

    Schneider, A S; Hughto, J; Berry, D K

    2013-01-01

    The formation of complex nonuniform phases of nuclear matter, known as nuclear pasta, is studied with molecular dynamics simulations containing 51200 nucleons. A phenomenological nuclear interaction is used that reproduces the saturation binding energy and density of nuclear matter. Systems are prepared at an initial density of 0.10fm$^{-3}$ and then the density is decreased by expanding the simulation volume at different rates to densities of 0.01 fm$^{-3}$ or less. An originally uniform system of nuclear matter is observed to form spherical bubbles ("swiss cheese"), hollow tubes, flat plates ("lasagna"), thin rods ("spaghetti") and, finally, nearly spherical nuclei with decreasing density. We explicitly observe nucleation mechanisms, with decreasing density, for these different pasta phase transitions. Topological quantities known as Minkowski functionals are obtained to characterize the pasta shapes. Different pasta shapes are observed depending on the expansion rate. This indicates non equilibrium effects...

  12. Endogenous formation of dimethylamine.

    Science.gov (United States)

    Zeisel, S H; DaCosta, K A; Fox, J G

    1985-01-01

    An understanding of the biosynthesis and metabolism of dimethylamine (DMA) is important because it is a precursor of dimethylnitrosamine (nitroso-DMA). DMA is the major short-chain aliphatic amine in human and rat urine. DMA is formed from trimethylamine (TMA), which, in turn, is a breakdown product of dietary choline. Enzymes within gut bacteria catalyse both of these reactions; it is not known whether mammalian cells can form DMA. To determine the relative importance of dietary choline, bacteria and other mechanisms for the formation of DMA, we measured DMA excretion in the urine of rats fed on a diet devoid of choline, and in urine of rats with no bacterial colonization of the intestines. We also describe an improved gas-chromatographic method for the measurement of methylamines in biological fluids. In control rats there were significant amounts of DMA within several biological fluids [urine, 54.2 +/- 3.0 mumol/kg body wt. per 24 h (556.2 +/- 37.5 nmol/ml); blood, 18.8 +/- 1.9 nmol/ml; gastric juice, 33.5 +/- 10.5 nmol/ml; means +/- S.E.M.]. Animals eating a diet containing no choline excreted as much MMA and DMA as did choline-supplemented rats (25-35 mumol/kg per 24 h), and they excreted slightly less TMA (2 versus 2.5 mumol/kg per 24 h). Rats with no gut bacteria excreted the same amount of DMA in their urine as did the control animals (45-55 mumol/kg per 24 h). They excreted much less MMA (16.3 +/- 1.5 versus 40.3 +/- 2.6 mumol/kg per 24 h; mean +/- S.E.M.; P less than 0.01), TMA (0.7 +/- 0.2 versus 2.5 +/- 0.5 mumol/kg per 24 h; mean +/- S.E.M.; P less than 0.01) and piperidine (2.0 +/- 0.3 versus 6.3 +/- 0.6 mumol/kg per 24 h; mean +/- S.E.M.; P less than 0.01) in their urine. From our studies we conclude that DMA is present in significant amounts within gastric fluid, an environment that is ideal for nitrosamine formation (under acidic conditions, nitroso-DMA is chemically formed by the reaction of nitrite with DMA). Results also indicate that dietary

  13. Group Formation in Economics

    Science.gov (United States)

    Demange, Gabrielle; Wooders, Myrna

    2005-01-01

    Broad and diverse ranges of activities are conducted within and by organized groups of individuals, including political, economic and social activities. These activities have recently become a subject of intense interest in economics and game theory. Some of the topics investigated in this collection are models of networks of power and privilege, trade networks, co-authorship networks, buyer-seller networks with differentiated products, and networks of medical innovation and the adaptation of new information. Other topics are social norms on punctuality, clubs and the provision of club goods and public goods, research and development and collusive alliances among corporations, and international alliances and trading agreements. While relatively recent, the literature on game theoretic studies of group formation in economics is already vast. This volume provides an introduction to this important literature on game-theoretic treatments of situations with networks, clubs, and coalitions, including some applications.

  14. Symbol Formation Reconsidered

    DEFF Research Database (Denmark)

    Wagoner, Brady

    2013-01-01

    Werner and Kaplan’s Symbol formation was published 50 years ago but its insights have yet to be adequately explored by psychology and other social sciences. This special issue aims to revisit this seminal work in search of concepts to work on key issues facing us today. This introductory article...... begins with a brief outline and contextualization of the book as well as of the articles that this special issue comprises. The first two articles were written by contributors who were part of the Werner era at Clark University. They explore the key concepts of the organismic and development, and situate...... them vis-à-vis other research at Clark and in American psychology more generally. The second two articles analyse Werner and Kaplan’s notions of ‘distancing’ and ‘physiognomic metaphor’, showing their roots in naturphilosophie and comparing them with contemporary theories. The last four articles apply...

  15. Symbol Formation Reconsidered

    DEFF Research Database (Denmark)

    Wagoner, Brady

    2013-01-01

    them vis-à-vis other research at Clark and in American psychology more generally. The second two articles analyse Werner and Kaplan’s notions of ‘distancing’ and ‘physiognomic metaphor’, showing their roots in naturphilosophie and comparing them with contemporary theories. The last four articles apply......Werner and Kaplan’s Symbol formation was published 50 years ago but its insights have yet to be adequately explored by psychology and other social sciences. This special issue aims to revisit this seminal work in search of concepts to work on key issues facing us today. This introductory article...... begins with a brief outline and contextualization of the book as well as of the articles that this special issue comprises. The first two articles were written by contributors who were part of the Werner era at Clark University. They explore the key concepts of the organismic and development, and situate...

  16. Cosmological Structure Formation

    CERN Document Server

    Primack, Joel R

    2015-01-01

    LCDM is remarkably successful in predicting the cosmic microwave background and large-scale structure, and LCDM parameters have been determined with only mild tensions between different types of observations. Hydrodynamical simulations starting from cosmological initial conditions are increasingly able to capture the complex interactions between dark matter and baryonic matter in galaxy formation. Simulations with relatively low resolution now succeed in describing the overall galaxy population. For example, the EAGLE simulation in volumes up to 100 cubic Mpc reproduces the observed local galaxy mass function nearly as well as semi-analytic models. It once seemed that galaxies are pretty smooth, that they generally grow in size as they evolve, and that they are a combination of disks and spheroids. But recent HST observations combined with high-resolution hydrodynamic simulations are showing that most star-forming galaxies are very clumpy; that galaxies often undergo compaction which reduces their radius and ...

  17. Formation of Service Ecosystems

    DEFF Research Database (Denmark)

    Jonas, Julia M.; Sörhammar, David; Satzger, Gerhard

    Purpose: Researchers in several different academic disciplines (such as marketing, information systems, and organization) have focused on investigating service and business ecosystems (e.g. Lusch and Nambisan, 2015; Gawer and Cusumano, 2014; Kude et al. 2012). We reviewed 69 papers in service...... – i.e. the “birth phase” (Moore, 2009) of a service ecosystem. This paper, therefore, aims to explore how the somewhat “magic” processes of service ecosystem formation that are being taken for granted actually occur. Methodology/Approach: Building on a review of core elements in the definitions...... proposition; a value proposition (e.g., a business opportunity or a business idea) may form the starting point for actors to collaborate and integrate resources in order realize the value proposition. The initiator of a service ecosystem could for example be an actor (Mark Zuckerberg), resources (website...

  18. Frost formation with salt

    Science.gov (United States)

    Guadarrama-Cetina, J.; Mongruel, A.; González-Viñas, W.; Beysens, D.

    2015-06-01

    The formation of frost in presence of salt (NaCl) crystal is experimentally investigated on a hydrophobic surface. It presents several remarkable features due to the interplay of salty-water saturation pressure evolution, initially lower than the saturation pressure of ice and water, and the percolating propagation of ice dendrites from defects throughout the supercooled water droplet pattern. In particular, it is remarkable that nucleation of supercooled water and/or ice is prevented around the salty drop in a region of inhibited condensation where the substrate remains dry. As condensation proceeds, salt concentration decreases to eventually become lower than ice's, allowing ice dendrites to hit the salty drop. Salty water then melts ice but eventually freezes as an effect of dilution.

  19. Chinese Affixes and Word Formation

    Directory of Open Access Journals (Sweden)

    Fu Ruomei

    2014-05-01

    Full Text Available Chinese language is one of the typical isolated languages. It lacks morphological variation; part of speech has no morphological signs; the additional component of word formation is less; and the roots never change their forms. The major method of Chinese word formation is the combination of roots according to certain grammatical relations. Although the affix word formation is not part of mainstream Chinese word formation, affix-formation is still an integral part of the Chinese word-formation. Article used literature review, summarized the types and meanings of Chinese affixes. And meanwhile, article analyzed word formation function of Chinese Affixes and quasi-affixes. The Chinese quasi-affixes have stronger capabilities in forming new words, but development direction of Chinese quasi-affixes has to stand the test of time.

  20. The primordium of radiation technologies in medicine at Brazil; Os primordios das radiacoes na medicina no Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Cuperschmid, Ethel M.; Campos, Tarcisio P.R. [Minas Gerais Univ., Belo Horizonte, MG (Brazil). Programa de Pos-graduacao em Ciencias e Tecnicas Nucleares]. E-mail: ethel@fafich.ufmg.br; campos@nuclear.ufmg.br

    2005-07-01

    The repeating of the experiments of Wilhelm Konrad Roentgen in Brazil happened thanks to the initiative of physician' from Rio de Janeiro and Minas Gerais. The present article, research fruit and documental rising from the archive of the Center of Memory of the Medicine (UFMG), it verified how the scientific innovations reached the Brazilian medical society. One year after X-ray's discovery (1895), Dr. Francisco Pereira das Neves got to repeat the German scientist's experiments. Based on imported material, as tube of Crookes, tube Hittorf, Ruhmkorff's inductor and plate Lumiere, the first X-ray for clinical medicine started in September of 1896. In Minas Gerais, the pioneer was Dr. Jose Carlos Ferreira Pires that, in 1898, brought the X-ray's took to the city of Formiga, being the first X-ray's device of South America. The distance of the great world scientific centers and the inherent difficulties the obtaining technical publications and foreigner supplies were not barriers. Everything was still for being understanding: the time of exposition, the correct way of the reading the foils, X rays effects in human. Until the decade of 1960 x-ray's use was predominantly for diagnosis ends, as they attest Brazilian medical publications. Therapeutic aspects of the radiation have been addressed as a focus in Brazil only after 1963. The present article intends to discuss the paper in the introduction of new radiation technologies and to punctuate the qualitative jumps heading for therapeutic use of the radioactivity in Brazil, aiming external influences, pioneering and improvisations. (author)

  1. Modeling Formation of Globular Clusters: Beacons of Galactic Star Formation

    CERN Document Server

    Gnedin, Oleg Y

    2010-01-01

    Modern hydrodynamic simulations of galaxy formation are able to predict accurately the rates and locations of the assembly of giant molecular clouds in early galaxies. These clouds could host star clusters with the masses and sizes of real globular clusters. I describe current state-of-the-art simulations aimed at understanding the origin of the cluster mass function and metallicity distribution. Metallicity bimodality of globular cluster systems appears to be a natural outcome of hierarchical formation and gradually declining fraction of cold gas in galaxies. Globular cluster formation was most prominent at redshifts z>3, when massive star clusters may have contributed as much as 20% of all galactic star formation.

  2. Hidrólise enzimática de fibras de cotilédones de soja e caracterização das frações sólidas e solúveis Enzymatic hydrolyses of fibers from soy cotyledons and characterization of solid and soluble fractions

    Directory of Open Access Journals (Sweden)

    Neusa Fátima Seibel

    2009-10-01

    Full Text Available O objetivo deste trabalho foi determinar as melhores condições de hidrólise enzimática de fibras alimentares de cotilédones de soja, original (FAO e micronizada (FAM, e caracterizar os hidrolisados sólidos e solúveis. As amostras foram hidrolisadas com carboidrase (200 µL g-1, durante 12 horas, a 30ºC ou com protease (150 µL g-1, durante 5 horas, a 55ºC. A fração sólida das amostras tratadas com carboidrase teve redução de 73% dos carboidratos e de 50% dos ácidos urônicos iniciais; houve aumento da concentração de proteínas e aumento da solubilidade e volume de intumescimento comparado com o material não hidrolisado. Proteínas de reserva da soja - beta-conglicinina e glicinina - foram extraídas das fibras alimentares não hidrolisadas e identificadas por eletroforese. A protease solubilizou 54% do total de proteínas das amostras e formou peptídeos com peso molecular menor que 10 KDa e uma banda de peso molecular próximo aos 25 KDa, provavelmente glicoproteína de parede celular, e deixou uma fração sólida com 76% de fibras alimentares totais. A microscopia eletrônica de varredura mostrou alterações físicas para a FAO hidrolisada com protease, com superfície mais porosa do que a FAM. O tratamento enzimático foi efetivo em alterar a composição química e estrutural das fibras, dando novas perspectivas para aplicações tecnológicas.The objective of this work was to determine the best enzymatic hydrolysis conditions for dietary fiber from soybean cotyledons, original (ODF and milled (MDF, and to characterize the solid and soluble hydrolytes. The samples were hydrolyzed with carbohydrase (200 µL g-1 for 12 hours, at 30ºC or protease (150 µL g-1 for 5 hours, at 55ºC. The solid fraction of the samples treated with carbohydrase had a reduction of 73% for the carbohydrates and of 50% for the uronic acids of the initial material; there was an increase in protein concentration and in solubility and swelling

  3. 茎用芥菜细胞质雄性不育系子叶原生质体培养和高效植株再生%Efficient Plant Regeneration from Cotyledon-derived Protoplasts of Cytoplasmic Male-sterile Tuber Mustard (Brassica juncea Coss. var. tumida Tsen et Lee)

    Institute of Scientific and Technical Information of China (English)

    陈利萍; 张明方; 平田; 曹家树; 陈竹君

    2001-01-01

    利用茎用芥菜细胞质雄性不育系原生质体培养获得了再生植株,并研究了影响原生质体培养的因素.结果表明,子叶是茎用芥菜原生质体培养最佳的外植体,10 d苗龄的子叶原生质体在改良MS培养基上培养3 d后发生第1次细胞分裂,6 d后发生第2次分裂,3周后形成细胞团,5周后形成肉眼可见的小愈伤.培养基中缺少NAA或2,4-D都会降低愈伤组织的再生能力.在含一定浓度的NAA(0.25 mg/L)和2,4-D(0.25 mg/L)培养基上诱导的愈伤组织质地致密且有光泽,芽的分化能力高;在MS+BA l mg/L+NAA 0.2 mg/L的培养基上芽的分化频率高达近29%,再生芽在1/2MS+NAA0.1 mg/L培养基上生根,形成完整植株.%Plants of cytoplasmic male-sterile ( CMS )tuber mustard were regenerated from cotyledon-derived protoplasts. The factors affecting protoplast culture and plant regeneration were studied. Protoplasts isolated from 10-day-old seedlings of CMS tuber mustard showed cell division upon culture on modified MS me dium, and microcalli were produced at a high plating efficiency of nearly 16% after a 5-week culture. Various combinations and concentrations of growth regulators were added to the medium for the proliferation of microcalli, and to obtain regenerants from the calli.The results showed that NAA or 2,4-D was necessary for callus proliferation. The absence of NAA and 2,4-D resulted in production of the callus with low regenerative potential, and in the presence of NAA (0.25mg/L) and 2,4-D(0.25 mg/L), compact and bright calli were produced with high reproductive potential. Regenerated shoots were obtained at a frequency of nearly 29% when the compact and bright calli were selected and transferred at an early stage to the medium containing BA (1 mg/L) and NAA(0.2 rmg/L).All the regenerated shoots were rooted on 1/2MS medium with NAA 0.1 mg/L added.

  4. Isolating Triggered Star Formation

    CERN Document Server

    Barton, Elizabeth J; Zentner, Andrew R; Bullock, James S; Wechsler, Risa H

    2007-01-01

    Galaxy pairs provide a potentially powerful means of studying triggered star formation from galaxy interactions. We use a large cosmological N-body simulation coupled with a well-tested semi-analytic substructure model to demonstrate that the majority of galaxies in close pairs reside within cluster or group-size halos and therefore represent a biased population, poorly suited for direct comparison to ``field'' galaxies. Thus, the frequent observation that some types of galaxies in pairs have redder colors than ``field'' galaxies is primarily a selection effect. We select galaxy pairs that are isolated in their dark matter halos with respect to other massive subhalos (N=2 halos) and a control sample of isolated galaxies (N=1 halos) for comparison. We then apply these selection criteria to a volume-limited subset of the 2dF Galaxy Redshift Survey with M_Bj ~ 5 above their average past value, while only 10% of isolated galaxies in the control sample show this level of enhancement. Thus, 14% (20 %) of the galaxi...

  5. Formation of "bound

    Science.gov (United States)

    Nowak, K.; Kästner, M.; Miltner, A.

    2009-04-01

    During degradation of organic pollutants in soil, metabolites, microbial biomass, CO2and "bound" residues ("non-extractable" residues in soil organic matter) are formed. Enhanced transformation of these contaminants into "bound" residues has been proposed as an alternative remediation method for polluted soils. However, this kind of residues may pose a potential risk for the environment due to their chemical structure and possible remobilization under different conditions. Therefore particular attention is given actually to "bound" residues. Part of these non-extractable residues may be "biogenic," because microorganisms use the carbon from the pollutant to form their biomass components (fatty acids, amino acids, amino sugars), which subsequently may be incorporated into soil organic matter. Furthermore, the CO2 originating from mineralization of xenobiotics, can be re-assimilated by microorganisms and also incorporated into "biogenic residue". The hazard posed by "bound" residues may be overestimated because they are "biogenic" (contain microbial fatty acids and amino acids). The knowledge about the pathways of "biogenic residue" formation is necessary for a proper assessment of the fate of tested pollutants and their turnover in the soil environment. Moreover, these data are needed to establish the realistic degradation rates of the contaminants in soil. The main objectives of this study are: to quantify the extent of "biogenic residue" (fatty acids, amino acids, amino sugars) formation during the degradation of a model pollutant (2,4-dichlorophenoxyacetic acid = 2,4-D) and during CO2 assimilation by microorganisms and to evaluate which components are mainly incorporated into "bound" residues. To investigate the extent of "biogenic residue" formation in soil during the degradation of 2,4-D, experiments with either 14C-U-ring and 13C6-2,4-D or carboxyl-14C 2,4-D were performed. The incubation experiments were performed according to OECD test guideline 307, in the

  6. ISLET FORMATION AND REGENERATION

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Objective To explore the mechanisms of differentiation and development of pancreatic endocrine cells as well as pancreatic regeneration. Methods Human embryonic pancreatic tissue at 7-14 weeks of gestation was collected. Diabetes mellitus rat model was induced with 65 mg/kg of streptozotocin. Insulin, glucagon, somatostatin, nestin, and cytokeratin 19 (CK19)of pancreatic tissues were observed by immunohistochemistry. Results At 9 weeks of gestation, pancreatic epithelial cells began to co-express insulin, glucagon, somatostatin, and CK19 before migration. Islet cells gradually congregated along with the increase of aging, and at 14 weeks of gestation histological examination showed islet formation. At 12 weeks of gestation, nestin-positive cells could be seen in the pancreatic mesenchyme. During early embryogenesis, islet cells of pancreatic ducts co-expressed insulin, glucagon, and somatostatin. During pancreatic regeneration after damage, nestin expression of islet cells increased. Conclusion In the early stage of embryogenesis, islet cells of primary pancreatic ducts can be differentiated to multipotential endocrine cells before migration. During tissue regeneration, pancreatic stem cells may differentiate and proliferate to form pancreatic islet.

  7. Planet Formation with Migration

    CERN Document Server

    Chambers, J E

    2006-01-01

    In the core-accretion model, gas-giant planets form solid cores which then accrete gaseous envelopes. Tidal interactions with disk gas cause a core to undergo inward type-I migration in 10^4 to 10^5 years. Cores must form faster than this to survive. Giant planets clear a gap in the disk and undergo inward type-II migration in <10^6 years if observed disk accretion rates apply to the disk as a whole. Type-II migration times exceed typical disk lifetimes if viscous accretion occurs mainly in the surface layers of disks. Low turbulent viscosities near the midplane may allow planetesimals to form by coagulation of dust grains. The radius r of such planetesimals is unknown. If r<0.5 km, the core formation time is shorter than the type-I migration timescale and cores will survive. Migration is substantial in most cases, leading to a wide range of planetary orbits, consistent with the observed variety of extrasolar systems. When r is of order 100m and midplane alpha is of order 3 times 10^-5, giant planets si...

  8. Designing for informed group formation

    DEFF Research Database (Denmark)

    Nicolajsen, Hanne Westh; Juel Jacobsen, Alice; Riis, Marianne

    2012-01-01

    A new design ―project preparation‖ preparing for the group formation in problem based project work is proposed and investigated. The main problem is to overcome group formation based on existing relations. The hypothesis is that theme development and group formation are somewhat counterproductive....... Following research based design methodology an experiment separating the two was initiated.This was to provide for more openness and creativity in contrast to a design in which existing relations seem predominant.......A new design ―project preparation‖ preparing for the group formation in problem based project work is proposed and investigated. The main problem is to overcome group formation based on existing relations. The hypothesis is that theme development and group formation are somewhat counterproductive...

  9. Function of type-2 Arabidopsis hemoglobin in the auxin-mediated formation of embryogenic cells during morphogenesis

    DEFF Research Database (Denmark)

    Elhiti, Mohamed; Hebelstrup, Kim; Wang, Aiming;

    2013-01-01

    Suppression of the Arabidopsis GLB2, a type-2 nonsymbiotic hemoglobin, enhances somatic embryogenesis by increasing auxin production. In the glb2 knock-out line (GLB2 -/-) polarization of PIN1 proteins and auxin maxima occurred at the base of the cotyledons of the zygotic explants, which are the ...

  10. Formation time of hadronic resonances

    Directory of Open Access Journals (Sweden)

    Vitev Ivan

    2012-11-01

    Full Text Available In heavy-ion collisions, formation time of hadrons of high transverse momentum can play a pivotal role in determining the perturbative dynamics of the final-state parton and particle system. We present methods to evaluate the formation times of light hadrons, hadronic resonances, open heavy flavor and quarkonia. Experimental implications of the short formation times of heavy particles are discussed in light of recent RHIC and LHC data.

  11. Spray formation: an inverse cascade

    CERN Document Server

    Ling, Yue; Tryggvason, Gretar; zaleski, Stephane

    2015-01-01

    We present a study of droplet formation in a gas-liquid mixing layer using direct numerical simulation. It is seen that two mechanisms compete to generate the droplets: fingering at the tip of the waves and hole formation in the thin liquid sheet. The three dimensional liquid structures are much shorter than the longitudinal wavelength of the instability at the first instant of their formation. As time evolves, the structures evolves to larger and larger scales, in a way similar to the inverse cascade of length scales in droplet impact and impact crown formation.

  12. Glass formation - A contemporary view

    Science.gov (United States)

    Uhlmann, D. R.

    1983-01-01

    The process of glass formation is discussed from several perspectives. Particular attention is directed to kinetic treatments of glass formation and to the question of how fast a given liquid must be cooled in order to form a glass. Specific consideration is paid to the calculation of critical cooling rates for glass formation, to the effects of nucleating heterogeneities and transients in nucleation on the critical cooling rates, to crystallization on reheating a glass, to the experimental determination of nucleation rates and barriers to crystal nucleation, and to the characteristics of materials which are most conducive to glass formation.

  13. Plasmapause formation at Saturn

    Science.gov (United States)

    Thomsen, M. F.; Mitchell, D. G.; Jia, X.; Jackman, C. M.; Hospodarsky, G.; Coates, A. J.

    2015-04-01

    Cassini observations during a rapid, high-latitude, dawnside pass from Saturn's lobe to inner magnetosphere on 25 June 2009 provide strong evidence for the formation of a "plasmapause" at Saturn by Vasyliunas-type nightside reconnection of previously mass-loaded flux tubes. A population of hot, tenuous plasma that lies between the lobe and the dense inner magnetospheric plasma is consistent with a region formed by very recent injection from a reconnection region in the tail, including low density, high temperature, supercorotational flow, a significant O+ content, and the near-simultaneous observation of enhanced Saturn kilometric radiation emissions. The sharp boundary between that region and the cool dense inner magnetospheric plasma thus separates flux tubes that were involved in the reconnection from those that successfully traversed the nightside without mass loss. This event demonstrates that tail reconnection can strip off inner magnetospheric plasma in to at least dipole L = 8.6. Clear evidence of flux tube interchange driven by the sharp boundary is found, both inward moving flux tubes of hotter plasma and, for the first time, the outward moving cool population. The outward moving cool regions have azimuthal sizes less than 1 RS, were probably created within the past 1.2 h, and have outflow speeds greater than about 5 km/s. At the outer edge of the reconnected region, there is also a possible signature of Dungey-type lobe reconnection following the initial Vasyliunas-type reconnection. Observations from this event are entirely consistent with previously described global MHD simulations of tail reconnection, plasmoid departure, and Saturnward injection of reconnected flux.

  14. Formative Assessment Probes: Is It a Rock? Continuous Formative Assessment

    Science.gov (United States)

    Keeley, Page

    2013-01-01

    A lesson plan is provided for a formative assessment probe entitled "Is It a Rock?" This probe is designed for teaching elementary school students about rocks through the use of a formative assessment classroom technique (FACT) known as the group Frayer Model. FACT activates students' thinking about a concept and can be used to…

  15. The formation of Pangea

    Science.gov (United States)

    Stampfli, G. M.; Hochard, C.; Vérard, C.; Wilhem, C.; vonRaumer, J.

    2013-05-01

    The making of Pangea is the result of large-scale amalgamation of continents and micro-continents, which started at the end of the Neoproterozoic with the formation of Gondwana. As pieces were added to Gondwana on its South-American, Antarctica and Australia side, ribbon-like micro-continents were detached from its African and South-Chinese side: Cadomia in the late Neoproterozoic, Avalonia and Hunia in the Ordovician, Galatia in the Devonian and Cimmeria in the Permian. Cadomia was re-accreted to Gondwana, but the other ribbon-continents were accreted to Baltica, North-China, Laurussia or Laurasia. Finding the origin of these numerous terranes is a major geological challenge. Recently, a global plate tectonic model was developed together with a large geological/geodynamic database, at the Lausanne University, covering the last 600 Ma of the Earth's history. Special attention was given to the placing of Gondwana derived terranes in their original position, using all possible constraints. We propose here a solution for the Variscan terranes, another paper deals with the Altaids. The Galatian super-terrane was detached from Gondwana in the Devonian, during the opening of Paleotethys, and was quickly separated into four sub-terranes that started to by-pass each other. The leading terranes collided at the end of the Devonian with the Hanseatic terrane detached from Laurussia. In the Carboniferous, Gondwana started to impinge onto the amalgamated terranes, creating the Variscan chain and the Pangean super-continent. East of Spain Paleotethys remained opened until the Triassic, subducting northward under Laurasia. Roll-back of the Paleotethyan slab triggered the collapse of most of the European Variscan orogen, which was replaced by series of Permian rifts, some of them becoming oceanized back-arc basins during the Triassic. Major force changes at the Pangean plate limits at the end of the Triassic provoked its break-up, through the opening of the proto

  16. Satellite formation flying relative dynamics, formation design, fuel optimal maneuvers and formation maintenance

    CERN Document Server

    Wang, Danwei; Poh, Eng Kee

    2017-01-01

    This book systematically describes the concepts and principles for multi-satellite relative motion, passive and near passive formation designs, trajectory planning and control for fuel optimal formation maneuvers, and formation flying maintenance control design. As such, it provides a sound foundation for researchers and engineers in this field to develop further theories and pursue their implementations. Though satellite formation flying is widely considered to be a major advance in space technology, there are few systematic treatments of the topic in the literature. Addressing that gap, the book offers a valuable resource for academics, researchers, postgraduate students and practitioners in the field of satellite science and engineering.

  17. Portable File Format (PFF) specifications

    Energy Technology Data Exchange (ETDEWEB)

    Dolan, Daniel H. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-02-01

    Created at Sandia National Laboratories, the Portable File Format (PFF) allows binary data transfer across computer platforms. Although this capability is supported by many other formats, PFF files are still in use at Sandia, particularly in pulsed power research. This report provides detailed PFF specifications for accessing data without relying on legacy code.

  18. Identity formation in multiparty negotiations

    NARCIS (Netherlands)

    Swaab, R; Postmes, T.; Spears, R.

    2008-01-01

    Based on the recently proposed Interactive Model of Identity Formation, we examine how top-down deductive and bottom-up inductive identity formations influence intentions and behaviour in multiparty negotiations. Results show that a shared identity can be deduced from the social context through reco

  19. Chain formation of metal atoms

    DEFF Research Database (Denmark)

    Bahn, Sune Rastad; Jacobsen, Karsten Wedel

    2001-01-01

    The possibility of formation of single-atomic chains by manipulation of nanocontacts is studied for a selection of metals (Ni, Pd, Pt, Cu, Ag, Au). Molecular dynamics simulations show that the tendency for chain formation is strongest for Au and Pt. Density functional theory calculations indicate...

  20. Potential Maximizers and Network Formation

    NARCIS (Netherlands)

    Slikker, M.; Dutta, P.K.; van den Nouweland, C.G.A.M.; Tijs, S.H.

    1998-01-01

    In this paper we study the formation of cooperation structures in superadditive cooperative TU-games.Cooperation structures are represented by hypergraphs.The formation process is modelled as a game in strategic form, where the payoffs are determined according to a weighted (extended) Myerson value.

  1. Sparse Matrix Vector Processing Formats

    NARCIS (Netherlands)

    Stathis, P.T.

    2004-01-01

    In this dissertation we have identified vector processing shortcomings related to the efficient storing and processing of sparse matrices. To alleviate existent problems we propose two storage formats denoted as Block Based Compression Storage (BBCS) format and Hierarchical Sparse Matrix (HiSM) stor

  2. Tariffs Formation on oil transportation

    Science.gov (United States)

    Glyzina, T. S.; Kolbysheva, Yu. V.; Grivtsova, I. S.; Dmitrieva, N. V.

    2016-09-01

    Oil transportation via trunk pipelines is an important part of the oil industry's activity. The main instrument of tariff regulation is the method of tariffs formation. Three methods of tariffs formation such as the method of economically justified costs (the Cost plus method), the method of economically justified return on investment capital (the RAB method), and the method of tariffs indexation were considered.

  3. Pathogenesis of postoperative adhesion formation

    NARCIS (Netherlands)

    Hellebrekers, B.W.J.; Kooistra, T.

    2011-01-01

    Background: Current views on the pathogenesis of adhesion formation are based on the "classical concept of adhesion formation", namely that a reduction in peritoneal fibrinolytic activity following peritoneal trauma is of key importance in adhesion development. Methods: A non-systematic literature

  4. The Principal as Formative Coach

    Science.gov (United States)

    Nidus, Gabrielle; Sadder, Maya

    2011-01-01

    Formative coaching, an approach that uses student work as the foundation for mentoring and professional development, can help principals become more effective instructional leaders. In formative coaching, teaches and coaches analyze student work to determine next steps for instruction. This article shows how a principal can use the steps of the…

  5. Cloud formation in giant planets

    CERN Document Server

    Helling, Christiane

    2007-01-01

    We calculate the formation of dust clouds in atmospheres of giant gas-planets. The chemical structure and the evolution of the grain size distribution in the dust cloud layer is discussed based on a consistent treatment of seed formation, growth/evaporation and gravitational settling. Future developments are shortly addressed.

  6. SAS FORMATS: USES AND ABUSES

    Science.gov (United States)

    SAS formats are a very powerful tool. They allow you to display the data in a more readable manner without modifying it. Formats can also be used to group data into categories for use in various procedures like PROC FREQ, PROC TTEST, and PROC MEANS (as a class variable). As ...

  7. Bundle Formation in Biomimetic Hydrogels

    NARCIS (Netherlands)

    Jaspers, Maarten; Pape, A C H; Voets, Ilja K; Rowan, Alan E; Portale, Giuseppe; Kouwer, Paul H J

    2016-01-01

    Bundling of single polymer chains is a crucial process in the formation of biopolymer network gels that make up the extracellular matrix and the cytoskeleton. This bundled architecture leads to gels with distinctive properties, including a large-pore-size gel formation at very low concentrations and

  8. Physics of primordial star formation

    Science.gov (United States)

    Yoshida, Naoki

    2012-09-01

    The study of primordial star formation has a history of nearly sixty years. It is generally thought that primordial stars are one of the key elements in a broad range of topics in astronomy and cosmology, from Galactic chemical evolution to the formation of super-massive blackholes. We review recent progress in the theory of primordial star formation. The standard theory of cosmic structure formation posits that the present-day rich structure of the Universe developed through gravitational amplification of tiny matter density fluctuations left over from the Big Bang. It has become possible to study primordial star formation rigorously within the framework of the standard cosmological model. We first lay out the key physical processes in a primordial gas. Then, we introduce recent developments in computer simulations. Finally, we discuss prospects for future observations of the first generation of stars.

  9. Formation depths of Fraunhofer lines

    CERN Document Server

    Gurtovenko, E A

    2015-01-01

    We have summed up our investigations performed in 1970--1993. The main task of this paper is clearly to show processes of formation of spectral lines as well as their distinction by validity and by location. For 503 photospheric lines of various chemical elements in the wavelength range 300--1000 nm we list in Table the average formation depths of the line depression and the line emission for the line centre and on the half-width of the line, the average formation depths of the continuum emission as well as the effective widths of the layer of the line depression formation. Dependence of average depths of line depression formation on excitation potential, equivalent widths, and central line depth are demonstrated by iron lines.

  10. Star Formation in Spiral Arms

    CERN Document Server

    Elmegreen, Bruce G

    2011-01-01

    The origin and types of spiral arms are reviewed with an emphasis on the connections between these arms and star formation. Flocculent spiral arms are most likely the result of transient instabilities in the gas that promote dense cloud formation, star formation, and generate turbulence. Long irregular spiral arms are usually initiated by gravitational instabilities in the stars, with the gas contributing to and following these instabilities, and star formation in the gas. Global spiral arms triggered by global perturbations, such as a galaxy interaction, can be wavemodes with wave reflection in the inner regions. They might grow and dominate the disk for several rotations before degenerating into higher-order modes by non-linear effects. Interstellar gas flows through these global arms, and through the more transient stellar spiral arms as well, where it can reach a high density and low shear, thereby promoting self-gravitational instabilities. The result is the formation of giant spiral arm cloud complexes,...

  11. Formative assessments as pedagogic tools

    Directory of Open Access Journals (Sweden)

    Ashwin Kumar

    2013-03-01

    Full Text Available This article aims at presenting a state of the art status of formative assessment as a pedagogic tool. To this end, a brief developmental account of different modes of assessment over the last decades will be presented first. Then, formative assessment will be discussed in its constructivist guise. The present literature on assessment suggests that assessment for learning (formative assessment not only represents an assessment tool but it also serves as a pedagogic tool to enhance learning and thinking. It has also gone to lengths to affect the design of classroom tasks and activities. Attempts have been made to delineate the underlying principles of formative assessment which can be used to picture the formation process of learners’ knowledge and development. Subsequently, alternative assessment techniques of which the present article will give an account have been suggested by scholars to operationalize these principles.

  12. Dwarf galaxy formation with H2-regulated star formation

    CERN Document Server

    Kuhlen, M; Madau, P; Smith, B; Wise, J

    2011-01-01

    We describe cosmological galaxy formation simulations with the adaptive mesh refinement code Enzo that incorporate a star formation prescription regulated by the local abundance of molecular hydrogen. We show that this H2-regulated prescription leads to a suppression of star formation in low mass halos (M_h 4, alleviating some of the dwarf galaxy problems faced by theoretical galaxy formation models. H2 regulation modifies the efficiency of star formation of cold gas directly, rather than indirectly reducing the cold gas content with "supernova feedback". We determine the local H2 abundance in our most refined grid cells (76 proper parsec in size at z=4) by applying the model of Krumholz, McKee, & Tumlinson, which is based on idealized 1D radiative transfer calculations of H2 formation-dissociation balance in ~100 pc atomic--molecular complexes. Our H2-regulated simulations are able to reproduce the empirical (albeit lower z) Kennicutt-Schmidt relation, including the low Sigma_gas cutoff due to the transi...

  13. Free-format RPG IV

    CERN Document Server

    Martin, Jim

    2013-01-01

    This how-to guide offers a concise and thorough introduction to the increased productivity, better readability, and easier program maintenance that comes with the free-format style of programming in RPG IV. Although free-format information is available in IBM manuals, it is not separated from everything else, thereby requiring hours of tedious research to track down the information needed. This book provides everything one needs to know to write RPG IV in the free-format style, and author Jim Martin not only teaches rules and syntax but also explains how this new style of coding has the pot

  14. AGN feedback in galaxy formation

    CERN Document Server

    Antonuccio-Delogu, Vincenzo

    2010-01-01

    During the past decade, convincing evidence has been accumulated concerning the effect of active galactic nuclei (AGN) activity on the internal and external environment of their host galaxies. Featuring contributions from well-respected researchers in the field, and bringing together work by specialists in both galaxy formation and AGN, this volume addresses a number of key questions about AGN feedback in the context of galaxy formation. The topics covered include downsizing and star-formation time scales in massive elliptical galaxies, the connection between the epochs of supermassive black h

  15. Understanding Galaxy Formation and Evolution

    CERN Document Server

    Avila-Reese, V

    2006-01-01

    The old dream of integrating into one the study of micro and macrocosmos is now a reality. Cosmology, astrophysics, and particle physics intersect in a scenario (but still not a theory) of cosmic structure formation and evolution called Lambda Cold Dark Matter (LCDM) model. This scenario emerged mainly to explain the origin of galaxies. In these lecture notes, I first present a review of the main galaxy properties, highlighting the questions that any theory of galaxy formation should explain. Then, the cosmological framework and the main aspects of primordial perturbation generation and evolution are pedagogically detached. Next, I focus on the ``dark side'' of galaxy formation, presenting a review on LCDM halo assembling and properties, and on the main candidates for non-baryonic dark matter. It is shown how the nature of elemental particles can influence on the features of galaxies and their systems. Finally, the complex processes of baryon dissipation inside the non-linearly evolving CDM halos, formation o...

  16. The multifaceted planetesimal formation process

    CERN Document Server

    Johansen, Anders; Tanaka, Hidekazu; Ormel, Chris; Bizzarro, Martin; Rickman, Hans

    2014-01-01

    Accumulation of dust and ice particles into planetesimals is an important step in the planet formation process. Planetesimals are the seeds of both terrestrial planets and the solid cores of gas and ice giants forming by core accretion. Left-over planetesimals in the form of asteroids, trans-Neptunian objects and comets provide a unique record of the physical conditions in the solar nebula. Debris from planetesimal collisions around other stars signposts that the planetesimal formation process, and hence planet formation, is ubiquitous in the Galaxy. The planetesimal formation stage extends from micrometer-sized dust and ice to bodies which can undergo run-away accretion. The latter ranges in size from 1 km to 1000 km, dependent on the planetesimal eccentricity excited by turbulent gas density fluctuations. Particles face many barriers during this growth, arising mainly from inefficient sticking, fragmentation and radial drift. Two promising growth pathways are mass transfer, where small aggregates transfer u...

  17. Portfolio Optimization under Habit Formation

    CERN Document Server

    Naryshkin, Roman

    2008-01-01

    The "standard" Merton formulation of optimal investment and consumption involves optimizing the integrated lifetime utility of consumption, suitably discounted, together with the discounted future bequest. In this formulation the utility of consumption at any given time depends only on the amount consumed at that time. However, it is both theoretically and empirically reasonable that an individuals utility of consumption would depend on past consumption history. Economists term this "Habit Formation". We introduce a new formulation of habit formation which allows non-addictive consumption patterns for a wide variety of utility specification. In this paper we construct a simple mathematical description of this habit formation and present numerical solutions. We compare the results with the standard ones and draw insights obtained from the habit formation. The consumption path tends to increase with time and be less sensitive to the market fluctuations, which perfectly reflects the existence of habit persistenc...

  18. First-order formative rules

    OpenAIRE

    Fuhs, Carsten; Kop, C.

    2014-01-01

    This paper discusses the method of formative rules for first-order term rewriting, which was previously defined for a higher-order setting. Dual to the well-known usable rules, formative rules allow dropping some of the term constraints that need to be solved during a termination proof. Compared to the higher-order definition, the first-order setting allows for significant improvements of the technique.

  19. Problem of professional personality formation

    Directory of Open Access Journals (Sweden)

    Pryazhnikova E.Yu.

    2012-09-01

    Full Text Available The article presents the current approaches to the problem of professional personality formation. It ana-lyzes the impact of professional identity of students on the choice of the specialist field they make. The article highlights certain aspects of the educational environment which promote to formation of compe-tences in students, relating to their choice of professional occupations. The article presents the analysis of students’ internal and external strivings after graduation from the university and their fulfillment.

  20. Star Formation in Various Environments

    CERN Document Server

    Brosch, N; Spector, O; Zitrin, A

    2008-01-01

    We describe studies of star formation in various galaxies using primarily observations from the Wise Observatory. In addition to surface photometry in the broad band UBVRI, we also use a set of narrow-band H-alpha filters tuned to different redshifts to isolate the emission line. With these observational data, and using models of evolutionary stellar populations, we unravel the star formation histories of the galaxies and connect them to other parameters, such as the galaxy environment.

  1. Overview of Sequence Data Formats.

    Science.gov (United States)

    Zhang, Hongen

    2016-01-01

    Next-generation sequencing experiment can generate billions of short reads for each sample and processing of the raw reads will add more information. Various file formats have been introduced/developed in order to store and manipulate this information. This chapter presents an overview of the file formats including FASTQ, FASTA, SAM/BAM, GFF/GTF, BED, and VCF that are commonly used in analysis of next-generation sequencing data.

  2. A New Female Cone, Araucaria beipoiaoensis sp. nov. from the Middle Jurassic Tiaojishan Formation, Beipiao, Western Liaoning, China and Its Evolutionary Significance

    Institute of Scientific and Technical Information of China (English)

    ZHENG Shaolin; ZHANG Lidong; ZHANG Wu; YANG Yajun

    2008-01-01

    A new species of Araucaria, Araucaria beipiaoensis sp. nov., collected from the Middle Jurassic Tiaojishan Formation, southern hill of Shebudai village, near Beipiao city, western Liaoning is based on a permineralized female cone, which is ovate to elliptical in shape, about 11 cm×7 cm ×4.5 cm in size. The cone bears rhomboid bracts that are spirally attached, texture thicker, with wings on both sides, with a detached lamina-like apex at the tip. In inner structure the ovuliferous scales are thicker and fused with bracts at the end with a ligular sulcus. There is one wingless ovule/seed per seed-scale complex embedded in the ovuliferous scale tissue, with the micropyle directed toward the cone axis. The ovules/seeds are long ovate or elliptical in shape, I cm long and near the base about 3 mm in diameter; the ovule/seed integuments have begun differentiation into 3 layers: the sarcotesta,sclerotesta, and endotesta. The nucellus is free from the enclosing integuments except in the chalazal region where it is fused to the inner layer (endotesta) of integument. Some ovules show cellularized nucellar tissue. Mature seeds exhibit the papery-thin wavy nucellus characteristically near to the micropyle. The embryonic tissue appears to be four cotyledons. The morphology and structure of the cone shows a close relationship to the araucarian cones of fossil and living genera but differs from any known species. The new species is distributed in the Middle Jurassic of the northern hemisphere, especially Asia, and has important significance for the evolution of the Family Araucariaceae.

  3. Introduction to format: the software tools test formatting program

    Energy Technology Data Exchange (ETDEWEB)

    Agazzi, C.

    1984-12-01

    Format is the name of the Software Tools formatter. It allows you to format text according to instructions that you place within the text. The text and instructions for each document you wish to create are kept in files. Each instruction, called a request line, makes changes in the way your document is laid out. For example, you can change the margins within your document to visually set off lists of items or topics. You can also bold face or underline words or sentences to highlight them. Throughout this manual are examples of how to use the Format request lines along with illustrations of the effects request lines have on an example letter. The request lines begin with a period in the first column on the screen. Each request line performs a specific function and is placed on the line immediately in front of the test to be formatted. Output lines are automatically filled; that is, their right margins are justified, without regard to the format of the input test lines.

  4. Formative assessment in Swedish mathematics classroom practice

    OpenAIRE

    Andersson, Catarina; Boström, Erika

    2015-01-01

    International audience; Using formative assessment has woken interest in many countries because of the potential effect on student achievement. To investigate Swedish teachers' use of formative assessment in mathematics, this study used classroom observations and teacher interviews of 38 mathematics teachers. The teachers used formative assessment, but additional formative activities could support teachers to better take advantage of the potential in using formative assessment.

  5. Treating tar sands formations with karsted zones

    Energy Technology Data Exchange (ETDEWEB)

    Vinegar, Harold J. (Bellaire, TX); Karanikas, John Michael (Houston, TX)

    2010-03-09

    Methods for treating a tar sands formation are described herein. The tar sands formation may have one or more karsted zones. Methods may include providing heat from one or more heaters to one or more karsted zones of the tar sands formation to mobilize fluids in the formation. At least some of the mobilized fluids may be produced from the formation.

  6. Gravity-induced differentiations and deficiency in flower formation observed on Columbus experiment WAICO1

    Science.gov (United States)

    Scherer, Günther; Pietrzyk, Peter

    formation. When mutants and wt only grown in the 1G centrifuge were compared the mutant leaves and cotyledons were smaller than in wt and hypocotyls were longer, but when the plants in µG for 12d were compared this difference was not found. Hence, gravity had an influence on leaf expansion and hypocotyl length in the mutant. The samples grown for 12d in 1G were kept in µG after 12d on due to a technical failure of the 1G centrifuge. They were retrieved about a year later. They had grown to full senescence and were preserved in a beautiful state as "straw". The observations on the root patterns by the astronaut photos at day 12 could be confirmed but plants had grown on and newer roots made coils just as the plants grown µG. Leaf sizes were different for wt and mutant. The most striking observation was that the mutants had developed small flower stems with a few flower buds but many flowers were incomplete, without the proper sepal or petal number or without gynaecium. The wild type plants had not developed any clear flower stem but only several malformed cell clumps shortly above the rosette. In ground laboratory experiments the mutants flower earlier which might explain why they developed flowers to some extent whereas the wt not at all. Microgravity might be a "stress" for flower formation. Taken together, several gravity-induced (or microgravity-induced) changes in differentiation occurred.

  7. Star formation and structure formation in galaxy collisions

    CERN Document Server

    Bournaud, Frederic

    2009-01-01

    A number of theoretical and simulation results on star and structure formation in galaxy interactions and mergers is reviewed, and recent hydrodynamic simulations are presented. The role of gravity torques and ISM turbulence in galaxy interactions, in addition to the tidal field, is highlighted. Interactions can drive gas inflows towards the central kpc and trigger a central starburst, the intensity and statistical properties of which are discussed. A kinematically decoupled core and a supermassive central black hole can be fueled. Outside of the central kpc, many structures can form inside tidal tails, collisional ring, bridges, including super star clusters and tidal dwarf galaxies. The formation of super star clusters in galaxy mergers can now be directly resolved in hydrodynamic simulations. Their formation mechanisms and long-term evolution are reviewed, and the connection with present-day early-type galaxies is discussed.

  8. An Adaptable Seismic Data Format

    Science.gov (United States)

    Krischer, Lion; Smith, James; Lei, Wenjie; Lefebvre, Matthieu; Ruan, Youyi; de Andrade, Elliott Sales; Podhorszki, Norbert; Bozdağ, Ebru; Tromp, Jeroen

    2016-11-01

    We present ASDF, the Adaptable Seismic Data Format, a modern and practical data format for all branches of seismology and beyond. The growing volume of freely available data coupled with ever expanding computational power opens avenues to tackle larger and more complex problems. Current bottlenecks include inefficient resource usage and insufficient data organization. Properly scaling a problem requires the resolution of both these challenges, and existing data formats are no longer up to the task. ASDF stores any number of synthetic, processed or unaltered waveforms in a single file. A key improvement compared to existing formats is the inclusion of comprehensive meta information, such as event or station information, in the same file. Additionally, it is also usable for any non-waveform data, for example, cross-correlations, adjoint sources or receiver functions. Last but not least, full provenance information can be stored alongside each item of data, thereby enhancing reproducibility and accountability. Any data set in our proposed format is self-describing and can be readily exchanged with others, facilitating collaboration. The utilization of the HDF5 container format grants efficient and parallel I/O operations, integrated compression algorithms and check sums to guard against data corruption. To not reinvent the wheel and to build upon past developments, we use existing standards like QuakeML, StationXML, W3C PROV and HDF5 wherever feasible. Usability and tool support are crucial for any new format to gain acceptance. We developed mature C/Fortran and Python based APIs coupling ASDF to the widely used SPECFEM3D_GLOBE and ObsPy toolkits.

  9. The dynamics of latifundia formation.

    Science.gov (United States)

    Chaves, Luis Fernando

    2013-01-01

    Land tenure inequity is a major social problem in developing nations worldwide. In societies, where land is a commodity, inequities in land tenure are associated with gaps in income distribution, poverty and biodiversity loss. A common pattern of land tenure inequities through the history of civilization has been the formation of latifundia [Zhuāngyuán in chinese], i.e., a pattern where land ownership is concentrated by a small fraction of the whole population. Here, we use simple Markov chain models to study the dynamics of latifundia formation in a heterogeneous landscape where land can transition between forest, agriculture and recovering land. We systematically study the likelihood of latifundia formation under the assumption of pre-capitalist trade, where trade is based on the average utility of land parcels belonging to each individual landowner during a discrete time step. By restricting land trade to that under recovery, we found the likelihood of latifundia formation to increase with the size of the system, i.e., the amount of land and individuals in the society. We found that an increase of the transition rate for land use changes, i.e., how quickly land use changes, promotes more equitable patterns of land ownership. Disease introduction in the system, which reduced land profitability for infected individual landowners, promoted the formation of latifundia, with an increased likelihood for latifundia formation when there were heterogeneities in the susceptibility to infection. Finally, our model suggests that land ownership reforms need to guarantee an equitative distribution of land among individuals in a society to avoid the formation of latifundia.

  10. The dynamics of latifundia formation.

    Directory of Open Access Journals (Sweden)

    Luis Fernando Chaves

    Full Text Available Land tenure inequity is a major social problem in developing nations worldwide. In societies, where land is a commodity, inequities in land tenure are associated with gaps in income distribution, poverty and biodiversity loss. A common pattern of land tenure inequities through the history of civilization has been the formation of latifundia [Zhuāngyuán in chinese], i.e., a pattern where land ownership is concentrated by a small fraction of the whole population. Here, we use simple Markov chain models to study the dynamics of latifundia formation in a heterogeneous landscape where land can transition between forest, agriculture and recovering land. We systematically study the likelihood of latifundia formation under the assumption of pre-capitalist trade, where trade is based on the average utility of land parcels belonging to each individual landowner during a discrete time step. By restricting land trade to that under recovery, we found the likelihood of latifundia formation to increase with the size of the system, i.e., the amount of land and individuals in the society. We found that an increase of the transition rate for land use changes, i.e., how quickly land use changes, promotes more equitable patterns of land ownership. Disease introduction in the system, which reduced land profitability for infected individual landowners, promoted the formation of latifundia, with an increased likelihood for latifundia formation when there were heterogeneities in the susceptibility to infection. Finally, our model suggests that land ownership reforms need to guarantee an equitative distribution of land among individuals in a society to avoid the formation of latifundia.

  11. Star formation in Galactic flows

    Science.gov (United States)

    Smilgys, Romas; Bonnell, Ian A.

    2016-06-01

    We investigate the triggering of star formation in clouds that form in Galactic scale flows as the interstellar medium passes through spiral shocks. We use the Lagrangian nature of smoothed particle hydrodynamics simulations to trace how the star-forming gas is gathered into self-gravitating cores that collapse to form stars. Large-scale flows that arise due to Galactic dynamics create shocks of the order of 30 km s-1 that compress the gas and form dense clouds (n > several × 102 cm-3) in which self-gravity becomes relevant. These large-scale flows are necessary for creating the dense physical conditions for gravitational collapse and star formation. Local gravitational collapse requires densities in excess of n > 103 cm-3 which occur on size scales of ≈1 pc for low-mass star-forming regions (M 103 M⊙). Star formation in the 250 pc region lasts throughout the 5 Myr time-scale of the simulation with a star formation rate of ≈10-1 M⊙ yr-1 kpc-2. In the absence of feedback, the efficiency of the star formation per free-fall time varies from our assumed 100 per cent at our sink accretion radius to values of <10-3 at low densities.

  12. VLBI Data Interchange Format (VDIF)

    Science.gov (United States)

    Whitney, Alan; Kettenis, Mark; Phillips, Chris; Sekido, Mamoru

    2010-01-01

    One important outcome of the 7th International e-VLBI Workshop in Shanghai in June 2008 was the creation of a task force to study and recommend a universal VLBI data format that is suitable for both on-the-wire e-VLBI data transfer, as well as direct disk storage. This task force, called the VLBI Data Interchange Format (VDIF) Task Force, is the first part of a two-part effort, the second of which will address standardization of e-VLBI data-transmission-protocols. The formation of the VDIF Task Force was prompted particularly by increased e-VLBI activity and the difficulties encountered when data arrive at a correlator in different formats from various instruments in various parts of the world. The task force created a streaming packetized data format that may be used for real-time and non-realtime e-VLBI, as well as direct disk storage. The data may contain multiple channels of time-sampled data with an arbitrary number of channels, arbitrary #bits/sample up to 32, and real or complex data; data rates in excess of 100 Gbps are supported. Each data packet is completely self-identifying via a short header, and data may be decoded without reference to any external information. The VDIF task force has completed its work, and the VDIF standard was ratified at the 2009 e-VLBI workshop in Madrid.

  13. Formation of porous gas hydrates

    CERN Document Server

    Salamatin, Andrey N

    2015-01-01

    Gas hydrates grown at gas-ice interfaces are examined by electron microscopy and found to have a submicron porous texture. Permeability of the intervening hydrate layers provides the connection between the two counterparts (gas and water molecules) of the clathration reaction and makes further hydrate formation possible. The study is focused on phenomenological description of principal stages and rate-limiting processes that control the kinetics of the porous gas hydrate crystal growth from ice powders. Although the detailed physical mechanisms involved in the porous hydrate formation still are not fully understood, the initial stage of hydrate film spreading over the ice surface should be distinguished from the subsequent stage which is presumably limited by the clathration reaction at the ice-hydrate interface and develops after the ice grain coating is finished. The model reveals a time dependence of the reaction degree essentially different from that when the rate-limiting step of the hydrate formation at...

  14. Structure formation in active networks

    CERN Document Server

    Köhler, Simone; Bausch, Andreas R

    2011-01-01

    Structure formation and constant reorganization of the actin cytoskeleton are key requirements for the function of living cells. Here we show that a minimal reconstituted system consisting of actin filaments, crosslinking molecules and molecular-motor filaments exhibits a generic mechanism of structure formation, characterized by a broad distribution of cluster sizes. We demonstrate that the growth of the structures depends on the intricate balance between crosslinker-induced stabilization and simultaneous destabilization by molecular motors, a mechanism analogous to nucleation and growth in passive systems. We also show that the intricate interplay between force generation, coarsening and connectivity is responsible for the highly dynamic process of structure formation in this heterogeneous active gel, and that these competing mechanisms result in anomalous transport, reminiscent of intracellular dynamics.

  15. Exoplanets Detection, Formation, Properties, Habitability

    CERN Document Server

    Mason, John W

    2008-01-01

    This edited, multi-author volume will be an invaluable introduction and reference to all key aspects in the field of exoplanet research. The reviews cover: Detection methods and properties of known exoplanets, Detection of extrasolar planets by gravitational microlensing. The formation and evolution of terrestrial planets in protoplanetary and debris disks. The brown dwarf-exoplanet connection. Formation, migration mechanisms and properties of hot Jupiters. Dynamics of multiple exoplanet systems. Doppler exoplanet surveys. Searching for exoplanets in the stellar graveyard. Formation and habitability of extra solar planets in multiple star systems. Exoplanet habitats and the possibilities for life. Moons of exoplanets: habitats for life. Contributing authors: •Rory Barnes •David P. Bennett •Jian Ge •Nader Haghighipour •Patrick Irwin •Hugh Jones •Victoria Meadows •Stanimir Metchev •I. Neill Reid •George Rieke •Caleb Scharf •Steinn Sigurdsson

  16. Black holes and galaxy formation

    CERN Document Server

    Propst, Raphael J

    2010-01-01

    Galaxies are the basic unit of cosmology. The study of galaxy formation is concerned with the processes that formed a heterogeneous universe from a homogeneous beginning. The physics of galaxy formation is complicated because it deals with the dynamics of stars, thermodynamics of gas and energy production of stars. A black hole is a massive object whose gravitational field is so intense that it prevents any form of matter or radiation to escape. It is hypothesized that the most massive galaxies in the universe- "elliptical galaxies"- grow simultaneously with the supermassive black holes at their centers, giving us much stronger evidence that black holes control galaxy formation. This book reviews new evidence in the field.

  17. Compulsory formation of solvento complexes

    Energy Technology Data Exchange (ETDEWEB)

    Kukushkin, Yu.N.; Kukushkin, V.Yu.

    1986-01-01

    The essence of the method of the compulsory formation of solvated complexes which are labile in substitution reactions has been described in this review. It is based on three techniques for eliminating ligands from the inner sphere of the original compounds: 1) binding of the ligands in sparingly soluble productions or their conversion into highly volatile compounds; 2) binding of the ligands in stronger compounds than the original products; 3) chemical conversion of coordinated ligands, which result in a loss of donor capacity by the reaction products and the departure of these products from the inner sphere of the complex compounds. If the solvent in which the reaction is carried out has a sufficient donor capability, the coordination capacity of the central ion is saturated by means of solvent molecules with the formation of a solvento complex. The method has been illustrated by a large number of concrete examples of reactions which result in the formation of compounds with an assigned composition.

  18. Bundle Formation in Biomimetic Hydrogels.

    Science.gov (United States)

    Jaspers, Maarten; Pape, A C H; Voets, Ilja K; Rowan, Alan E; Portale, Giuseppe; Kouwer, Paul H J

    2016-08-08

    Bundling of single polymer chains is a crucial process in the formation of biopolymer network gels that make up the extracellular matrix and the cytoskeleton. This bundled architecture leads to gels with distinctive properties, including a large-pore-size gel formation at very low concentrations and mechanical responsiveness through nonlinear mechanics, properties that are rarely observed in synthetic hydrogels. Using small-angle X-ray scattering (SAXS), we study the bundle formation and hydrogelation process of polyisocyanide gels, a synthetic material that uniquely mimics the structure and mechanics of biogels. We show how the structure of the material changes at the (thermally induced) gelation point and how factors such as concentration and polymer length determine the architecture, and with that, the mechanical properties. The correlation of the gel mechanics and the structural parameters obtained from SAXS experiments is essential in the design of future (synthetic) mimics of biopolymer networks.

  19. Dense Cloud Formation and Star Formation in a Barred Galaxy

    CERN Document Server

    Nimori, M; Sorai, K; Watanabe, Y; Hirota, A; Namekata, D

    2012-01-01

    We investigate the properties of massive, dense clouds formed in a barred galaxy and their possible relation to star formation, performing a two-dimensional hydrodynamical simulation with the gravitational potential obtained from the 2Mass data from the barred spiral galaxy, M83. Since the environment for cloud formation and evolution in the bar region is expected to be different from that in the spiral arm region, barred galaxies are a good target to study the environmental effects on cloud formation and the subsequent star formation. Our simulation uses for an initial 80 Myr an isothermal flow of non-self gravitating gas in the barred potential, then including radiative cooling, heating and self-gravitation of the gas for the next 40 Myr, during which dense clumps are formed. We identify many cold, dense gas clumps for which the mass is more than $10^4M_{\\odot}$ (a value corresponding to the molecular clouds) and study the physical properties of these clumps. The relation of the velocity dispersion of the i...

  20. Star formation and gas supply

    Science.gov (United States)

    Catinella, B.

    2016-06-01

    A detailed knowledge of how gas cycles in and around galaxies, and how it depends on galaxy properties such as stellar mass and star formation rate, is crucial to understand galaxy formation and evolution. We take advantage of the most sensitive surveys of cold gas in massive galaxies, GASS and COLD GASS, as well as of the state-of-the-art HI blind survey ALFALFA to investigate how molecular and atomic hydrogen reservoirs vary along and across the main sequence of star-forming galaxies.

  1. Strategy Formation in Eastern Jutland

    DEFF Research Database (Denmark)

    Olesen, Kristian

    2008-01-01

      In Eastern Jutland a strategy formation process has been initiated with the aim of developing a strategic spatial plan for the city region.  An organisation has been set up to deal with the first phase of the process, which is to carry out three functional analyses and prepare a common vision...... on which level a serious strategy formation process can take place.  There is a danger that a common strategic spatial plan is more an expression of the lowest common denominator and the municipalities request for infrastructure investments rather than being a spatial strategy with transformative power. ...

  2. Optimal Reconfiguration of Tetrahedral Formations

    Science.gov (United States)

    Huntington, Geoffrey; Rao, Anil V.; Hughes, Steven P.

    2004-01-01

    The problem of minimum-fuel formation reconfiguration for the Magnetospheric Multi-Scale (MMS) mission is studied. This reconfiguration trajectory optimization problem can be posed as a nonlinear optimal control problem. In this research, this optimal control problem is solved using a spectral collocation method called the Gauss pseudospectral method. The objective of this research is to provide highly accurate minimum-fuel solutions to the MMS formation reconfiguration problem and to gain insight into the underlying structure of fuel-optimal trajectories.

  3. Magnetohydrodynamic mechanism for pedestal formation.

    Science.gov (United States)

    Guazzotto, L; Betti, R

    2011-09-16

    Time-dependent two-dimensional magnetohydrodynamic simulations are carried out for tokamak plasmas with edge poloidal flow. Differently from conventional equilibrium theory, a density pedestal all around the edge is obtained when the poloidal velocity exceeds the poloidal sound speed. The outboard pedestal is induced by the transonic discontinuity, the inboard one by mass redistribution. The density pedestal follows the formation of a highly sheared flow at the transonic surface. These results may be relevant to the L-H transition and pedestal formation in high performance tokamak plasmas.

  4. Formation Criterion for Synthetic Jets

    Science.gov (United States)

    2005-10-01

    formation data for the axisymmetric case were published over 50 years ago by Ingard and Labate.10 More recent studies33,34 suggest that L0/d > 1 for...with the axisymmetric data from Ingard and Labate10 and Smith et al.33 are compared in Fig. 7. It is found that the available data are consis- tent with...the jet formation criterion with an empirically determined constant K equal to approximately 0.16. The deviation of Ingard and Labate’s data at their

  5. Pattern formations and oscillatory phenomena

    CERN Document Server

    Kinoshita, Shuichi

    2013-01-01

    Patterns and their formations appear throughout nature, and are studied to analyze different problems in science and make predictions across a wide range of disciplines including biology, physics, mathematics, chemistry, material science, and nanoscience. With the emergence of nanoscience and the ability for researchers and scientists to study living systems at the biological level, pattern formation research has become even more essential. This book is an accessible first of its kind guide for scientists, researchers, engineers, and students who require a general introduction to thi

  6. Terrestrial Planet Formation: Constraining the Formation of Mercury

    Science.gov (United States)

    Lykawka, Patryk Sofia; Ito, Takashi

    2017-04-01

    How the four terrestrial planets of the solar system formed is one of the most fundamental questions in the planetary sciences. Particularly, the formation of Mercury remains poorly understood. We investigated terrestrial planet formation by performing 110 high-resolution N-body simulation runs using more than 100 embryos and 6000 disk planetesimals representing a primordial protoplanetary disk. To investigate the formation of Mercury, these simulations considered an inner region of the disk at 0.2–0.5 au (the Mercury region) and disks with and without mass enhancements beyond the ice line location, a IL, in the disk, where a IL = 1.5, 2.25, and 3.0 au were tested. Although Venus and Earth analogs (considering both orbits and masses) successfully formed in the majority of the runs, Mercury analogs were obtained in only nine runs. Mars analogs were also similarly scarce. Our Mercury analogs concentrated at orbits with a ∼ 0.27–0.34 au, relatively small eccentricities/inclinations, and median mass m ∼ 0.2 {M}\\oplus . In addition, we found that our Mercury analogs acquired most of their final masses from embryos/planetesimals initially located between 0.2 and ∼1–1.5 au within 10 Myr, while the remaining mass came from a wider region up to ∼3 au at later times. Although the ice line was negligible in the formation of planets located in the Mercury region, it enriched all terrestrial planets with water. Indeed, Mercury analogs showed a wide range of water mass fractions at the end of terrestrial planet formation.

  7. Exciton Formation in Disordered Semiconductors

    DEFF Research Database (Denmark)

    Klochikhin, A.; Reznitsky, A.; Permogorov, S.

    1999-01-01

    Stationary luminescence spectra of disordered solid solutions can be accounted by the model of localized excitons. Detailed analysis of the long time decay kinetics of luminescence shows that exciton formation in these systems is in great extent due to the bimolecular reaction of separated carrie...

  8. Inside-Out Planet Formation

    CERN Document Server

    Chatterjee, Sourav

    2013-01-01

    The compact multi-transiting planet systems discovered by Kepler challenge planet formation theory. Formation in situ from disks with radial mass surface density profiles similar to the minimum mass solar nebula (MMSN) but boosted in normalization by factors ~10 has been suggested. We propose that a more natural way to create these planets in the inner disk is formation sequentially from the inside-out via creation of successive gravitationally unstable rings fed from a continuous stream of small (~cm--m size) "pebbles", drifting inwards via gas drag. Pebbles collect at the pressure maximum associated with the transition from a magneto-rotational instability (MRI)-inactive ("dead zone") region to an inner MRI-active zone. A pebble ring builds up until it either becomes gravitationally unstable to form an ~1--10 M_\\Earth planet directly or induces gradual planet formation via core accretion. The planet continues to accrete from the disk until it becomes massive enough to isolate itself from the accretion flow....

  9. The EPRDATA Format: A Dialogue

    Energy Technology Data Exchange (ETDEWEB)

    Hughes, Henry Grady III [Los Alamos National Laboratory

    2015-08-18

    Recently the Los Alamos Nuclear Data Team has communicated certain issues of concern in relation to the new electron/photon/relaxation ACE data format as released in the eprdata12 library. In this document those issues are parsed, analyzed, and answered.

  10. Stereotype Formation : Biased by Association

    NARCIS (Netherlands)

    Le Pelley, Mike E.; Reimers, Stian J.; Calvini, Guglielmo; Spears, Russell; Beesley, Tom; Murphy, Robin A.

    2010-01-01

    We propose that biases in attitude and stereotype formation might arise as a result of learned differences ill the extent its which social groups have previously been predictive elf behavioral or physical properties Experiments 1 and 2 demonstrate that differences in the experienced predictiveness o

  11. Exciton Formation in Disordered Semiconductors

    DEFF Research Database (Denmark)

    Klochikhin, A.; Reznitsky, A.; Permogorov, S.

    1999-01-01

    Stationary luminescence spectra of disordered solid solutions can be accounted by the model of localized excitons. Detailed analysis of the long time decay kinetics of luminescence shows that exciton formation in these systems is in great extent due to the bimolecular reaction of separated carrier...

  12. Formative Assessment in Dance Education

    Science.gov (United States)

    Andrade, Heidi; Lui, Angela; Palma, Maria; Hefferen, Joanna

    2015-01-01

    Feedback is crucial to students' growth as dancers. When used within the framework of formative assessment, or assessment for learning, feedback results in actionable next steps that dancers can use to improve their performances. This article showcases the work of two dance specialists, one elementary and one middle school teacher, who have…

  13. Electrochemical analysis of microdroplet formation

    NARCIS (Netherlands)

    Fukuyama, M.; Yoshida, Y.; Eijkel, J.C.T.; Berg, van den A.; Hibara, A.; Fujii, T.; Hibara, A.; Takeuchi, S.; Fukuba, T.

    2012-01-01

    This paper reports an electrochemical measurement system with a high-speed camera for observation of molecular transport phenomena at a water-oil (W/O) interface during microfluidic droplet formation. For demonstration of the system, currents corresponding to the transport of electrolyte ions to for

  14. Adventitious root formation in Arabidopsis

    NARCIS (Netherlands)

    Massoumi, Mehdi

    2016-01-01

    Adventitious root (AR) formation is indispensable in vegetative propagation and is widely used. A better understanding of the underlying mechanisms is needed to improve rooting treatments. We first established a system to study rooting in Arabidopsis, the model organism in plant biology but only occ

  15. Formative Assessment in Dance Education

    Science.gov (United States)

    Andrade, Heidi; Lui, Angela; Palma, Maria; Hefferen, Joanna

    2015-01-01

    Feedback is crucial to students' growth as dancers. When used within the framework of formative assessment, or assessment for learning, feedback results in actionable next steps that dancers can use to improve their performances. This article showcases the work of two dance specialists, one elementary and one middle school teacher, who have…

  16. Mediating Among Diverse Data Formats.

    Science.gov (United States)

    1998-01-01

    different text editors often want to share documents, Microsoft Word programs permit users to load documents not only in Word’s own formats, but also in...HTML 47 0 DVI to PDF 42 0 Word to Postscript 39 2 error retrieving document Postscript to webbed images 25 1 ghostscript did not return I£ TEXto

  17. The Road to Galaxy Formation

    CERN Document Server

    Keel, William C

    2007-01-01

    The formation of galaxies is one of the greatest puzzles in astronomy, the solution is shrouded in the depths of space and time, but has profound implications for the universe we observe today. The book discusses the beginnings of the process from cosmological observations and calculations, considers the broad features of galaxies that we need to explain and what we know of their later history. The author compares the competing theories for galaxy formation and considers the progress expected from new generations of powerful telescopes both on earth and in space. In this second edition the author has retained the observationally-based approach of the first edition, a feature which was particularly well-reviewed: Writing in Nature, Carlton Baugh noted in February 2003 that “It is refreshing, in a market dominated by theorists, to come across a book on galaxy formation written from an observational perspective. The Road to Galaxy Formation should prove to be a handy primer on observations for graduate student...

  18. Formation of Rationally Heterogeneous Expectations

    NARCIS (Netherlands)

    Pfajfar, D.

    2012-01-01

    Abstract: This paper models expectation formation by taking into account that agents produce heterogeneous expectations due to model uncertainty, informational frictions and different capacities for processing information. We show that there are two general classes of steady states within this frame

  19. Genetic analysis of symbiosome formation

    NARCIS (Netherlands)

    Ovchinnikova, E.

    2012-01-01

    Endosymbiotic interactions form a fundament of life as we know it and are characterized by the formation of new specialized membrane compartments, in which the microbes are hosted inside living plant cells. A striking example is the symbiosis between legumes and nitrogen-fixing Rhizobium bacteria

  20. The Formation of Galactic Bulges

    NARCIS (Netherlands)

    Peletier, R.; Balcells, M.; Falcon-Barroso, J.; Graham, A.

    2005-01-01

    We summarise some recent results about nearby galactic bulges that are relevant to their formation. We highlight a number of significant advances in our understanding of the surface brightness profiles, stellar populations, and especially the very centers of spiral galaxies. We also view our own Mil

  1. Genetic analysis of symbiosome formation

    NARCIS (Netherlands)

    Ovchinnikova, E.

    2012-01-01

    Endosymbiotic interactions form a fundament of life as we know it and are characterized by the formation of new specialized membrane compartments, in which the microbes are hosted inside living plant cells. A striking example is the symbiosis between legumes and nitrogen-fixing Rhizobium bacteria (r

  2. Formative Evaluations in Online Classes

    Directory of Open Access Journals (Sweden)

    Jennifer Peterson

    2016-01-01

    Full Text Available Online courses are continuing to become an important component of higher education course offerings. As the number of such courses increases, the need for quality course evaluations and course improvements is also increasing. However, there is not general agreement on the best ways to evaluate and use evaluation data to improve online courses. While summative student evaluations are commonly used, these may not be the most effective for online course evaluation and quality improvement. Formative evaluation is one method of providing course evaluation and feedback to the instructor during the course while course improvements can be made to benefit the students currently in the course as well as future students. This method of evaluation not only provides for an effective course evaluation but also continuous improvement in the course. This case study reviews formative evaluations done in two online courses in a Health Information Management program. These formative evaluations were found to be quite effective for the identification and development of needed course improvement throughout the semester as well as for use as input into overall course evaluations. These evaluations demonstrate the value of formative evaluations and provide a methodology for implementing such evaluations into an online course.

  3. The multifaceted planetesimal formation process

    DEFF Research Database (Denmark)

    Johansen, Anders; Blum, Jürgen; Tanaka, Hidekazu

    2013-01-01

    Accumulation of dust and ice particles into planetesimals is an important step in the planet formation process. Planetesimals are the seeds of both terrestrial planets and the solid cores of gas and ice giants forming by core accretion. Left-over planetesimals in the form of asteroids, trans-Nept...

  4. Galaxy Formation and SN Feedback

    CERN Document Server

    Tissera, P B; White, S D M; Springel, V

    2006-01-01

    We present a Supernova (SN) feedback model that succeeds at describing the chemical and energetic effects of SN explosions in galaxy formation simulations. This new SN model has been coupled to GADGET-2 and works within a new multiphase scheme which allows the description of a co-spatial mixture of cold and hot interstellar medium phases. No ad hoc scale-dependent parameters are associated to these SN and multiphase models making them particularly suited to studies of galaxy formation in a cosmological framework. Our SN model succeeds not only in setting a self-regulated star formation activity in galaxies but in triggering collimated chemical-enriched galactic winds. The effects of winds vary with the virial mass of the systems so that the smaller the galaxy, the larger the fraction of swept away gas and the stronger the decrease in its star formation activity. The fact that the fraction of ejected metals exceeds 60 per cent regardless of mass, suggests that SN feedback can be the responsible mechanism of th...

  5. Earth and Terrestrial Planet Formation

    CERN Document Server

    Jacobson, Seth A

    2015-01-01

    The growth and composition of Earth is a direct consequence of planet formation throughout the Solar System. We discuss the known history of the Solar System, the proposed stages of growth and how the early stages of planet formation may be dominated by pebble growth processes. Pebbles are small bodies whose strong interactions with the nebula gas lead to remarkable new accretion mechanisms for the formation of planetesimals and the growth of planetary embryos. Many of the popular models for the later stages of planet formation are presented. The classical models with the giant planets on fixed orbits are not consistent with the known history of the Solar System, fail to create a high Earth/Mars mass ratio, and, in many cases, are also internally inconsistent. The successful Grand Tack model creates a small Mars, a wet Earth, a realistic asteroid belt and the mass-orbit structure of the terrestrial planets. In the Grand Tack scenario, growth curves for Earth most closely match a Weibull model. The feeding zon...

  6. Control over Administrative Contract Formation

    Directory of Open Access Journals (Sweden)

    Frane Staničić

    2016-02-01

    Full Text Available Administrative contracts in Croatian legislation represent a novelty introduced into the General Administration Procedure Act in 2010. This is a novelty which has not proved to be successful in practice. Control over administrative contract formation is inevitable and is very significant for a number of reasons. Firstly, public legal bodies which form them do so by exercising their own public powers which are without doubt subject to legality control; secondly, in forming administrative contracts, public funds are used which must be controlled; thirdly, forming administrative contracts often touches on using public goods. Due to the restrictive interpretation of administrative contracts in Croatian legislation, this institute is indisputably only regulated in the General Taxation Act. However, for more than two decades contracts which satisfy all presumptions have existed in our law in order to be considered as administrative contracts. It is for this reason that control over contracts will be dealt with for contracts considered by the author to be administrative contracts. These are contracts on concessions and contracts on public procurement. How inadequate today’s regulation of control of administrative contract formation is will be demonstrated, particularly regarding contracts on concession and public procurement. Legislative changes will be proposed which should result in a more quality system of control over administrative contract formation. How control over administrative contract formation cannot be considered as separate from control over administrative contract execution will also be shown.

  7. Wintertime Haze Formation in Beijing

    Science.gov (United States)

    Levy Zamora, M. E.

    2015-12-01

    Recent severe haze events in China have attracted significant public attention due to the severely reduced visibility and unprecedentedly high pollutant concentrations. Particular attention has been given to the high concentrations of particulate matter with a diameter less than 2.5 microns (PM2.5), which can exceed several hundred micrograms per cubic meter over several days. During January and February of 2015, a suite of aerosol instruments was deployed in Beijing to directly measure a comprehensive set of aerosol properties, including the particle size distribution, effective density, and chemical composition. In this presentation, we will discuss the particulate matter formation mechanisms, the evolution of aerosol properties throughout the event, and how the winter formation mechanisms compare with the warmer seasons. We show that the periodic cycles of severe haze episodes in Beijing are largely driven by meteorological conditions. During haze events, stagnation typically develops as a result of a low planetary boundary layer and weak southerly wind from polluted industrial source regions. Stronger northerly winds were frequently observed during the clean period, which carry unpolluted air masses from the less populated northern mountainous areas. Nucleation consistently occurs on clean days, producing a high number concentration of nano particles. The particle mass concentration exceeding several hundred micrograms per cubic meter is attributed to the continuous size growth from the nucleation-mode particles (diameter less than 10 nm) over multiple days to produce a high concentration of larger particles (diameter greater than 100 nm). The particle chemical composition in Beijing is similar to those commonly measured in other urban centers, which is indicative of chemical constituents dominated by secondary aerosol formation. Our results reveal that the severe haze formation in Beijing during the wintertime is similar to the mechanism of haze formation

  8. H$_2$-based star formation laws in galaxy formation models

    CERN Document Server

    Xie, Lizhi; Hirschmann, Michaela; Fontanot, Fabio; Zoldan, Anna

    2016-01-01

    We update our recently published model for GAlaxy Evolution and Assembly (GAEA), to include a self-consistent treatment of the partition of cold gas in atomic and molecular hydrogen. Our model provides significant improvements with respect to previous ones used for similar studies. In particular, GAEA (i) includes a sophisticated chemical enrichment scheme accounting for non-instantaneous recycling of gas, metals, and energy; (ii) reproduces the measured evolution of the galaxy stellar mass function; (iii) reproduces the observed correlation between galaxy stellar mass and gas metallicity at different redshifts. These are important prerequisites for models considering a metallicity dependent efficiency of molecular gas formation. We also update our model for disk sizes and show that model predictions are in nice agreement with observational estimates for the gas, stellar and star forming disks at different cosmic epochs. We analyse the influence of different star formation laws including empirical relations b...

  9. Standard Formats for Atomic Data: the APED

    Energy Technology Data Exchange (ETDEWEB)

    Smith, R K; Brickhouse, N S; Liedahl, D A; Raymond, J C

    2001-06-05

    Standardized formats for atomic data used in calculating emission from a collisionally-ionized plasma are described. The formats use the astronomical-standard FITS format, and are extendible to other purposes, such as photoionization data. The formats emphasize storing references to the original data source and keeping the data in as-received form, to aid in checking against the original literature.

  10. Treating tar sands formations with dolomite

    Energy Technology Data Exchange (ETDEWEB)

    Vinegar, Harold J.; Karanikas, John Michael

    2010-06-08

    Methods for treating a tar sands formation are described herein. The tar sands formation may include dolomite and hydrocarbons. Methods may include providing heat at less than the decomposition temperature of dolomite from one or more heaters to at least a portion of the formation. At least some of the hydrocarbon fluids are mobilized in the formation. At least some of the hydrocarbon fluids may be produced from the formation.

  11. Formation of quasiparallel Alfven solitons

    Science.gov (United States)

    Hamilton, R. L.; Kennel, C. F.; Mjolhus, E.

    1992-01-01

    The formation of quasi-parallel Alfven solitons is investigated through the inverse scattering transformation (IST) for the derivative nonlinear Schroedinger (DNLS) equation. The DNLS has a rich complement of soliton solutions consisting of a two-parameter soliton family and a one-parameter bright/dark soliton family. In this paper, the physical roles and origins of these soliton families are inferred through an analytic study of the scattering data generated by the IST for a set of initial profiles. The DNLS equation has as limiting forms the nonlinear Schroedinger (NLS), Korteweg-de-Vries (KdV) and modified Korteweg-de-Vries (MKdV) equations. Each of these limits is briefly reviewed in the physical context of quasi-parallel Alfven waves. The existence of these limiting forms serves as a natural framework for discussing the formation of Alfven solitons.

  12. Molecule Formation on Interstellar Grains

    Science.gov (United States)

    Vidali, G.

    2011-05-01

    The first experiments that were expressively designed to be applicable to hydrogen formation reactions in the ISM measured the efficiency of formation of molecular hydrogen on a polycrystalline olivine (Pirronello et al. (1997a)). It soon turned out that more was needed, and research began on the mechanism of reaction, on the in uence of the surface morphology, and on the excitation of the just- ormed molecule. In this review, I summarize what we learned from these and other experiments, and where more work is needed: in the elementary steps of reaction, in the bridging of the laboratory-ISM gap (large ux/large surface - small ux/small grain) using simulations, and in using realistic samples of dust grains. Understanding what experiments can and cannot deliver will help in designing and targeting observations, and vice-versa.

  13. Galaxy formation through hierarchical clustering

    Science.gov (United States)

    White, Simon D. M.; Frenk, Carlos S.

    1991-01-01

    Analytic methods for studying the formation of galaxies by gas condensation within massive dark halos are presented. The present scheme applies to cosmogonies where structure grows through hierarchical clustering of a mixture of gas and dissipationless dark matter. The simplest models consistent with the current understanding of N-body work on dissipationless clustering, and that of numerical and analytic work on gas evolution and cooling are adopted. Standard models for the evolution of the stellar population are also employed, and new models for the way star formation heats and enriches the surrounding gas are constructed. Detailed results are presented for a cold dark matter universe with Omega = 1 and H(0) = 50 km/s/Mpc, but the present methods are applicable to other models. The present luminosity functions contain significantly more faint galaxies than are observed.

  14. Coevolutionary modeling in network formation

    KAUST Repository

    Al-Shyoukh, Ibrahim

    2014-12-03

    Network coevolution, the process of network topology evolution in feedback with dynamical processes over the network nodes, is a common feature of many engineered and natural networks. In such settings, the change in network topology occurs at a comparable time scale to nodal dynamics. Coevolutionary modeling offers the possibility to better understand how and why network structures emerge. For example, social networks can exhibit a variety of structures, ranging from almost uniform to scale-free degree distributions. While current models of network formation can reproduce these structures, coevolutionary modeling can offer a better understanding of the underlying dynamics. This paper presents an overview of recent work on coevolutionary models of network formation, with an emphasis on the following three settings: (i) dynamic flow of benefits and costs, (ii) transient link establishment costs, and (iii) latent preferential attachment.

  15. Shock Formation in Lovelock Theories

    CERN Document Server

    Reall, Harvey S; Way, Benson

    2014-01-01

    We argue that Lovelock theories of gravity suffer from shock formation, unlike General Relativity. We consider the propagation of (i) a discontinuity in curvature, and (ii) weak, high frequency, gravitational waves. Such disturbances propagate along characteristic hypersurfaces of a "background" spacetime and their amplitude is governed by a transport equation. In GR the transport equation is linear. In Lovelock theories, it is nonlinear and its solutions can blow up, corresponding to the formation of a shock. We show that this effect is absent in some simple cases e.g. a flat background spacetime, and demonstrate its presence for a plane wave background. We comment on weak cosmic censorship, the evolution of shocks, and the nonlinear stability of Minkowski spacetime, in Lovelock theories.

  16. Controlled Irradiative Formation of Penitentes

    CERN Document Server

    Bergeron, V; Betterton, M D

    2006-01-01

    Spike-shaped structures are produced by light-driven ablation in very different contexts. Penitentes 1-4 m high are common on Andean glaciers, where their formation changes glacier dynamics and hydrology. Laser ablation can produce cones 10-100 microns high with a variety of proposed applications in materials science. We report the first laboratory generation of centimeter-scale snow and ice penitentes. Systematically varying conditions allows identification of the essential parameters controlling the formation of ablation structures. We demonstrate that penitente initiation and coarsening requires cold temperatures, so that ablation leads to sublimation rather than melting. Once penitentes have formed, further growth of height can occur by melting. The penitentes intially appear as small structures (3 mm high) and grow by coarsening to 1-5 cm high. Our results are an important step towards understanding and controlling ablation morphologies.

  17. Photophoresis boosts giant planet formation

    CERN Document Server

    Teiser, Jens

    2013-01-01

    In the core accretion model of giant planet formation, a solid protoplanetary core begins to accrete gas directly from the nebula when its mass reaches about 5 earth masses. The protoplanet has at most a few million years to reach runaway gas accretion, as young stars lose their gas disks after 10 million years at the latest. Yet gas accretion also brings small dust grains entrained in the gas into the planetary atmosphere. Dust accretion creates an optically thick protoplanetary atmosphere that cannot efficiently radiate away the kinetic energy deposited by incoming planetesimals. A dust-rich atmosphere severely slows down atmospheric cooling, contraction, and inflow of new gas, in contradiction to the observed timescales of planet formation. Here we show that photophoresis is a strong mechanism for pushing dust out of the planetary atmosphere due to the momentum exchange between gas and dust grains. The thermal radiation from the heated inner atmosphere and core is sufficient to levitate dust grains and to ...

  18. Rapid gas hydrate formation process

    Science.gov (United States)

    Brown, Thomas D.; Taylor, Charles E.; Unione, Alfred J.

    2013-01-15

    The disclosure provides a method and apparatus for forming gas hydrates from a two-phase mixture of water and a hydrate forming gas. The two-phase mixture is created in a mixing zone which may be wholly included within the body of a spray nozzle. The two-phase mixture is subsequently sprayed into a reaction zone, where the reaction zone is under pressure and temperature conditions suitable for formation of the gas hydrate. The reaction zone pressure is less than the mixing zone pressure so that expansion of the hydrate-forming gas in the mixture provides a degree of cooling by the Joule-Thompson effect and provides more intimate mixing between the water and the hydrate-forming gas. The result of the process is the formation of gas hydrates continuously and with a greatly reduced induction time. An apparatus for conduct of the method is further provided.

  19. Singularities formation, structure, and propagation

    CERN Document Server

    Eggers, J

    2015-01-01

    Many key phenomena in physics and engineering are described as singularities in the solutions to the differential equations describing them. Examples covered thoroughly in this book include the formation of drops and bubbles, the propagation of a crack and the formation of a shock in a gas. Aimed at a broad audience, this book provides the mathematical tools for understanding singularities and explains the many common features in their mathematical structure. Part I introduces the main concepts and techniques, using the most elementary mathematics possible so that it can be followed by readers with only a general background in differential equations. Parts II and III require more specialised methods of partial differential equations, complex analysis and asymptotic techniques. The book may be used for advanced fluid mechanics courses and as a complement to a general course on applied partial differential equations.

  20. Formation of Supermassive Black Holes

    CERN Document Server

    Volonteri, Marta

    2010-01-01

    Evidence shows that massive black holes reside in most local galaxies. Studies have also established a number of relations between the MBH mass and properties of the host galaxy such as bulge mass and velocity dispersion. These results suggest that central MBHs, while much less massive than the host (~ 0.1%), are linked to the evolution of galactic structure. In hierarchical cosmologies, a single big galaxy today can be traced back to the stage when it was split up in hundreds of smaller components. Did MBH seeds form with the same efficiency in small proto-galaxies, or did their formation had to await the buildup of substantial galaxies with deeper potential wells? I briefly review here some of the physical processes that are conducive to the evolution of the massive black hole population. I will discuss black hole formation processes for `seed' black holes that are likely to place at early cosmic epochs, and possible observational tests of these scenarios.

  1. Restucturing the Project Work Format

    DEFF Research Database (Denmark)

    Dupont, Søren

    2015-01-01

    The chapter is based on an evaluation of a pedagogical experiment at Roskilde University, the Antology Experiment. The objective of the experiment was to develop and expand the framework for project work through the production of anthologies compiled collectively by a number of project groups....... The novel aspects of the Anthology Experiment were most notably its magnitude and complexity. In this experiment the groups were totalling some 50 students who were working together. The experiment used a well-known publishing format from research, namely the anthology form, which usually focuses....... The organization was complex, the written product changed from project to article format, the students had to concentrate on working in their own project group as well as in the so-called clusters, and the form of exam was radically changed...

  2. Complexity of Formation in Holography

    CERN Document Server

    Chapman, Shira; Myers, Robert C

    2016-01-01

    It was recently conjectured that the quantum complexity of a holographic boundary state can be computed by evaluating the gravitational action on a bulk region known as the Wheeler-DeWitt patch. We apply this complexity=action duality to evaluate the `complexity of formation' (arXiv:1509.07876, arXiv:1512.04993), i.e., the additional complexity arising in preparing the entangled thermofield double state with two copies of the boundary CFT compared to preparing the individual vacuum states of the two copies. We find that for boundary dimensions $d>2$, the difference in the complexities grows linearly with the thermal entropy at high temperatures. For the special case $d=2$, the complexity of formation is a fixed constant, independent of the temperature. We compare these results to those found using the complexity=volume duality.

  3. Star Cluster Formation and Feedback

    CERN Document Server

    Krumholz, Mark R; Arce, Hector G; Dale, James E; Gutermuth, Robert; Klein, Richard I; Li, Zhi-Yun; Nakamura, Fumitaka; Zhang, Qizhou

    2014-01-01

    Stars do not generally form in isolation. Instead, they form in clusters, and in these clustered environments newborn stars can have profound effects on one another and on their parent gas clouds. Feedback from clustered stars is almost certainly responsible for a number of otherwise puzzling facts about star formation: that it is an inefficient process that proceeds slowly when averaged over galactic scales; that most stars disperse from their birth sites and dissolve into the galactic field over timescales $\\ll 1$ Gyr; and that newborn stars follow an initial mass function (IMF) with a distinct peak in the range $0.1 - 1$ $M_\\odot$, rather than an IMF dominated by brown dwarfs. In this review we summarize current observational constraints and theoretical models for the complex interplay between clustered star formation and feedback.

  4. Formation of polar ring galaxies

    CERN Document Server

    Bournaud, F

    2003-01-01

    Polar ring galaxies are peculiar systems in which a gas rich, nearly polar ring surrounds an early-type or elliptical host galaxy. Two formation scenarios for these objects have been proposed: they are thought to form either in major galaxy mergers or by tidal accretion of the polar material from a gas rich donor galaxy. Both scenarios are studied through N-body simulations including gas dynamics and star formation. Constraints on physical parameters are drawn out, in order to determine which scenario is the most likely to occur. Polar ring galaxies from each scenario are compared with observations and we discuss whether the accretion scenario and the merging scenario account for observational properties of polar ring galaxies. The conclusion of this study is that the accretion scenario is both the most likely and the most supported by observations. Even if the merging scenario is rather robust, most polar ring galaxies are shown to be the result of tidal gas accretion events.

  5. Cophasing the Planet Formation Imager

    CERN Document Server

    Petrov, Romain G; Elhalkouj, Thami; Monnier, John; Ireland, Michael; Kraus, Stefan

    2016-01-01

    The Planet Formation Imager (PFI) is a project for a very large optical interferometer intended to obtain images of the planet formation process at scales as small as the Hill sphere of giant exoplanets. Its main science instruments will work in the thermal infrared but it will be cophased in the near infrared, where it requires also some capacity for scientific imaging. PFI imaging and resolution specifications imply an array of 12 to 20 apertures and baselines up to a few kilometers cophased at near infrared coherent magnitudes as large as 10. This paper discusses various cophasing architectures and the corresponding minimum diameter of individual apertures, which is the dominant element of PFI cost estimates. From a global analysis of the possible combinations of pairwise fringe sensors, we show that conventional approaches used in current interferometers imply the use of prohibitively large telescopes and we indicate the innovative strategies that would allow building PFI with affordable apertures smaller...

  6. New Paradigms For Asteroid Formation

    CERN Document Server

    Johansen, Anders; Cuzzi, Jeffrey N; Morbidelli, Alessandro; Gounelle, Matthieu

    2015-01-01

    Asteroids and meteorites provide key evidence on the formation of planetesimals in the Solar System. Asteroids are traditionally thought to form in a bottom-up process by coagulation within a population of initially km-scale planetesimals. However, new models challenge this idea by demonstrating that asteroids of sizes from 100 to 1000 km can form directly from the gravitational collapse of small particles which have organised themselves in dense filaments and clusters in the turbulent gas. Particles concentrate passively between eddies down to the smallest scales of the turbulent gas flow and inside large-scale pressure bumps and vortices. The streaming instability causes particles to take an active role in the concentration, by piling up in dense filaments whose friction on the gas reduces the radial drift compared to that of isolated particles. In this chapter we review new paradigms for asteroid formation and compare critically against the observed properties of asteroids as well as constraints from meteo...

  7. Biofilm formation on abiotic surfaces

    DEFF Research Database (Denmark)

    Tang, Lone

    2011-01-01

    Bacteria can attach to any surface in contact with water and proliferate into complex communities enclosed in an adhesive matrix, these communities are called biofilms. The matrix makes the biofilm difficult to remove by physical means, and bacteria in biofilm can survive treatment with many...... antibiotics, disinfectants and cleaning agents. Biofilms are therefore very difficult to eradicate, and an attractive approach to limit biofilm formation is to reduce bacterial adhesion. In this thesis it was shown that lowering the surface roughness had a greater effect on bacterial retention compared....... The ability to form biofilms, the amount of eDNA produced, and the importance of eDNA for biofilm formation or stability did not correlate and varied from strain to strain. Finally, a method was developed for immobilization of living bacteria for analysis by atomic force microscopy (AFM). AFM is used...

  8. Complexity of formation in holography

    Science.gov (United States)

    Chapman, Shira; Marrochio, Hugo; Myers, Robert C.

    2017-01-01

    It was recently conjectured that the quantum complexity of a holographic boundary state can be computed by evaluating the gravitational action on a bulk region known as the Wheeler-DeWitt patch. We apply this complexity=action duality to evaluate the `complexity of formation' [1, 2], i.e. the additional complexity arising in preparing the entangled thermofield double state with two copies of the boundary CFT compared to preparing the individual vacuum states of the two copies. We find that for boundary dimensions d > 2, the difference in the complexities grows linearly with the thermal entropy at high temperatures. For the special case d = 2, the complexity of formation is a fixed constant, independent of the temperature. We compare these results to those found using the complexity=volume duality.

  9. The Chemistry of Planet Formation

    Science.gov (United States)

    Oberg, Karin I.

    2017-01-01

    Exo-planets are common, and they span a large range of compositions. The origins of the observed diversity of planetary compositions is largely unconstrained, but must be linked to the planet formation physics and chemistry. Among planets that are Earth-like, a second question is how often such planets form hospitable to life. A fraction of exo-planets are observed to be ‘physically habitable’, i.e. of the right temperature and bulk composition to sustain a water-based prebiotic chemistry, but this does not automatically imply that they are rich in the building blocks of life, in organic molecules of different sizes and kinds, i.e. that they are chemically habitable. In this talk I will argue that characterizing the chemistry of protoplanetary disks, the formation sites of planets, is key to address both the origins of planetary bulk compositions and the likelihood of finding organic matter on planets. The most direct path to constrain the chemistry in disks is to directly observe it. In the age of ALMA it is for the first time possible to image the chemistry of planet formation, to determine locations of disk snowlines, and to map the distributions of different organic molecules. Recent ALMA highlights include constraints on CO snowline locations, the discovery of spectacular chemical ring systems, and first detections of more complex organic molecules. Observations can only provide chemical snapshots, however, and even ALMA is blind to the majority of the chemistry that shapes planet formation. To interpret observations and address the full chemical complexity in disks requires models, both toy models and astrochemical simulations. These models in turn must be informed by laboratory experiments, some of which will be shown in this talk. It is thus only when we combine observational, theoretical and experimental constraints that we can hope to characterize the chemistry of disks, and further, the chemical compositions of nascent planets.

  10. Hydrodynamics of catheter biofilm formation

    CERN Document Server

    Sotolongo-Costa, Oscar; Rodriguez-Perez, Daniel; Martinez-Escobar, Sergio; Fernandez-Barbero, Antonio

    2009-01-01

    A hydrodynamic model is proposed to describe one of the most critical problems in intensive medical care units: the formation of biofilms inside central venous catheters. The incorporation of approximate solutions for the flow-limited diffusion equation leads to the conclusion that biofilms grow on the internal catheter wall due to the counter-stream diffusion of blood through a very thin layer close to the wall. This biological deposition is the first necessary step for the subsequent bacteria colonization.

  11. Star Formation in MUSCEL Galaxies

    Science.gov (United States)

    Young, Jason; Kuzio de Naray, Rachel; Wang, Sharon Xuesong

    2017-01-01

    We present preliminary star-formation histories for a subset of the low surface brightness (LSB) galaxies in the MUSCEL (MUltiwavelength observations of the Structure, Chemistry, and Evolution of LSB galaxies) program. These histories are fitted against ground-based IFU spectra in tandem with space-based UV and IR photometry. MUSCEL aims to use these histories along with kinematic analyses to determine the physical processes that have caused the evolution of LSB galaxies to diverge from their high surface brightness counterparts.

  12. Cosmological models of galaxy formation

    Science.gov (United States)

    Menci, N.

    I review the present status of galaxy formation models within a cosmological framework. I focus on semi-analytic models based on the Cold Dark Matter scenario, discussing the role of the different physical process involving dark matter and baryons in determining the observed statistical properties of galaxies and their dependence on cosmic time and on environment evolution. I will highlight some present problems and briefly present the main effects of assuming a Warm Dark Matter scenario.

  13. Illusory contour formation survives crowding.

    Science.gov (United States)

    Lau, Jonathan Siu Fung; Cheung, Sing-Hang

    2012-06-12

    Flanked objects are difficult to identify using peripheral vision due to visual crowding, which limits conscious access to target identity. Nonetheless, certain types of visual information have been shown to survive crowding. Such resilience to crowding provides valuable information about the underlying neural mechanism of crowding. Here we ask whether illusory contour formation survives crowding of the inducers. We manipulated the presence of illusory contours through the (mis)alignment of the four inducers of a Kanizsa square. In the inducer-aligned condition, the observers judged the perceived shape (thin vs. fat) of the illusory Kanizsa square, manipulated by small rotations of the inducers. In the inducer-misaligned condition, three of the four inducers (all except the upper-left) were rotated 90°. The observers judged the orientation of the upper-left inducer. Crowding of the inducers worsened observers' performance significantly only in the inducer-misaligned condition. Our findings suggest that information for illusory contour formation survives crowding of the inducers. Crowding happens at a stage where the low-level featural information is integrated for inducer orientation discrimination, but not at a stage where the same information is used for illusory contour formation.

  14. Formation of Kuiper Belt Binaries

    CERN Document Server

    Goldreich, P; Sari, R; Goldreich, Peter; Lithwick, Yoram; Sari, Re'em

    2002-01-01

    It appears that at least several percent of large Kuiper belt objects are members of wide binaries. Physical collisions are too infrequent to account for their formation. Collisionless gravitational interactions are more promising. These provide two channels for binary formation. In each, the initial step is the formation of a transient binary when two large bodies penetrate each other's Hill spheres. Stabilization of a transient binary requires that it lose energy. Either dynamical friction due to small bodies or the scattering of a third large body can be responsible. Our estimates favor the former, albeit by a small margin. We predict that most objects of size comparable to those currently observed in the Kuiper belt are members of multiple systems. More specifically, we derive the probability that a large body is a member of a binary with semi-major axis of order a. The probability depends upon sigma, the total surface density, Sigma, the surface density of large bodies having radius R, and theta=10^-4, t...

  15. Galaxy Formation Spanning Cosmic History

    CERN Document Server

    Benson, Andrew J

    2010-01-01

    Over the past several decades, galaxy formation theory has met with significant successes. In order to test current theories thoroughly we require predictions for as yet unprobed regimes. To this end, we describe a new implementation of the Galform semi-analytic model of galaxy formation. Our motivation is the success of the model described by Bower et al. in explaining many aspects of galaxy formation. Despite this success, the Bower et al. model fails to match some observational constraints and certain aspects of its physical implementation are not as realistic as we would like. The model described in this work includes substantially updated physics, taking into account developments in our understanding over the past decade, and removes certain limiting assumptions made by this (and most other) semi-analytic models. This allows it to be exploited reliably in high-redshift and low mass regimes. Furthermore, we have performed an exhaustive search of model parameter space to find a particular set of model para...

  16. Star Formation in Satellite Galaxies

    CERN Document Server

    Gutíerrez, C M; Funes, J G; Ribeiro, M B

    2006-01-01

    We present narrow-band observations of the H$\\alpha$ emission in a sample of 31 satellite orbiting isolated giant spiral galaxies. The sample studied spans the range $-19formation rates are 0.68 and 3.66 M$_\\sun$ yr$^{-1}$ respectively. Maps of the spatial distribution of ionized gas are presented. The star-forming regions show a rich structure in which frequently discrete complexes are imposed over more diffuse structures. In general, the current star formation rates are smaller that the mean values in the past obtained from the current stellar content; this probably indicates a declining rhythm with time in the generation of new stars. However, the reserve of gas is enough to continue fueling the current levels of star formation activity for at least another Hubble time. Four of the o...

  17. Positronium formation in various polyimides

    Energy Technology Data Exchange (ETDEWEB)

    Okamoto, Ken-ichi; Tanaka, Kazuhiro; Katsube, Mikio; Sueoka, Osamu; Ito, Yasuo (Yamaguchi Univ., Ube (Japan). Faculty of Engineering Tokyo Univ. (Japan). Research Center for Nuclear Science and Technology)

    1993-03-01

    Positronium (Ps) formation in various polyimides has been studied. It has been found that Ps yield is zero or small in the polyimides having pyromellitic dianhydride (PMDA) and 3,3[sup '],4,4[sup ']-benzophenonetetracarboxylic dianhydride (BTDA) as acid anhydride moiety, while those having 3,3[sup '],4,4[sup ']-biphenyltetracarboxylic dianhydride (BPDA) and 2,2-bis(3,4-dicarboxyphenyl)hexafluoropropane dianhydride (6FDA) form Ps with intensities up to about 20%. This difference is well correlated with the electron affinity of these moieties: PMDA > BTDA > BPDA [approx] 6FDA. In another experiment o-Ps yields and its lifetimes were measured in benzene solutions of monomeric model compounds (imide compounds prepared from n-butylamine and the acid anhydrides). It has been found that the model compounds from PMDA and BTDA both inhibit Ps formation and quench o-Ps lifetimes but that those from BPDA and 6FDA have neither the inhibition nor the quenching effects. The results show that the spur model is applicable for Ps formation in the polyimides. (Author).

  18. Positronium formation in various polyimides

    Science.gov (United States)

    Okamoto, Ken-ichi; Tanaka, Kazuhiro; Katsube, Mikio; Sueoka, Osamu; Ito, Yasuo

    1993-03-01

    Positronium (Ps) formation in various polyimides has been studied. It has been found that Ps yield is zero or small in the polyimides having pyromellitic dianhydride (PMDA) and 3,3',4,4'-benzophenonetetracarboxylic dianhydride (BTDA) as acid anhydride moiety, while those having 3,3',4,4'-biphenyltetracarboxylic dianhydride (BPDA) and 2,2- bis(3,4-dicarboxyphenyl)hexafluoropropane dianhydride (6FDA) form Ps with intensities up to about 20%. This difference is well correlated with the electron affinity of these moieties: PMDA > BTDA > BPDA ˜ 6FDA. In another experiment o-Ps yields and its lifetimes were measured in benzene solutions of monomeric model compounds (imide compounds prepared from n-butylamine and the acid anhydrides). It has been found that the model compounds from PMDA and BTDA both inhibit Ps formation and quench o-Ps lifetimes but that those from BPDA and 6FDA have neither the inhibition nor the quenching effects. The results show that the spur model is applicable for Ps formation in the polyimides.

  19. Star Formation in Tadpole Galaxies

    Directory of Open Access Journals (Sweden)

    Casiana Muñoz-Tuñon

    2014-12-01

    Full Text Available Tadpole Galaxies look like a star forming head with a tail structure to the side. They are also named cometaries. In a series of recent works we have discovered a number of issues that lead us to consider them extremely interesting targets. First, from images, they are disks with a lopsided starburst. This result is rmly  established with long slit spectroscopy in a nearby representative sample. They rotate with the head following the rotation pattern but displaced from the rotation center. Moreover, in a search for extremely metal poor (XMP galaxies, we identied tadpoles as the dominant shapes in the sample - nearly 80% of the local XMP galaxies have a tadpole morphology. In addition, the spatially resolved analysis of the metallicity shows the remarkable result that there is a metallicity drop right at the position of the head. This is contrary to what intuition would say and dicult to explain if star formation has happened from gas processed in the disk. The result could however be understood if the star formation is driven by pristine gas falling into the galaxy disk. If conrmed, we could be unveiling, for the rst time, cool  ows in action in our nearby world. The tadpole class is relatively frequent at high redshift - 10% of resolvable galaxies in the Hubble UDF but less than 1% in the local Universe. They are systems that could track cool ows and test models of galaxy formation.

  20. Gravity, Turbulence, and Star Formation

    CERN Document Server

    Elmegreen, B G

    2004-01-01

    The azimuthal power spectra of optical emission from star formation and dust in spiral galaxies resembles the azimuthal power spectra of HI emission from the LMC. These and other power spectra of whole galaxies all resemble that of velocity in incompressible Kolmogorov turbulence. The reasons for this are unknown but it could be simply that star and cloud formation are the result of a mixture of processes and each gives a power spectrum similar to Kolmogorov turbulence, within the observable errors. The important point is that star and cloud formation are not random but are correlated over large distances by forces that span several orders of magnitude in scale. These forces are probably the usual combination of self-gravity, turbulence, and compression from stellar winds and supernovae, but they have to work in concert to create the structures we see in galaxies. In addition, the identification of flocculant spirals with swing amplified instabilities opens the possibility that a high fraction of turbulence i...

  1. NSDF: Neuroscience Simulation Data Format.

    Science.gov (United States)

    Ray, Subhasis; Chintaluri, Chaitanya; Bhalla, Upinder S; Wójcik, Daniel K

    2016-04-01

    Data interchange is emerging as an essential aspect of modern neuroscience. In the areas of computational neuroscience and systems biology there are multiple model definition formats, which have contributed strongly to the development of an ecosystem of simulation and analysis tools. Here we report the development of the Neuroscience Simulation Data Format (NSDF) which extends this ecosystem to the data generated in simulations. NSDF is designed to store simulator output across scales: from multiscale chemical and electrical signaling models, to detailed single-neuron and network models, to abstract neural nets. It is self-documenting, efficient, modular, and scalable, both in terms of novel data types and in terms of data volume. NSDF is simulator-independent, and can be used by a range of standalone analysis and visualization tools. It may also be used to store variety of experimental data. NSDF is based on the widely used HDF5 (Hierarchical Data Format 5) specification and is open, platform-independent, and portable.

  2. Star Formation in Molecular Clouds

    CERN Document Server

    Krumholz, Mark R

    2011-01-01

    Star formation is one of the least understood processes in cosmic evolution. It is difficult to formulate a general theory for star formation in part because of the wide range of physical processes involved. The interstellar gas out of which stars form is a supersonically turbulent plasma governed by magnetohydrodynamics. This is hard enough by itself, since we do not understand even subsonic hydrodynamic turbulence very well, let alone supersonic non-ideal MHD turbulence. However, the behavior of star-forming clouds in the ISM is also obviously influenced by gravity, which adds complexity, and by both continuum and line radiative processes. Finally, the behavior of star-forming clouds is influenced by a wide variety of chemical processes, including formation and destruction of molecules and dust grains (which changes the thermodynamic behavior of the gas) and changes in ionization state (which alter how strongly the gas couples to magnetic fields). As a result of these complexities, there is nothing like a g...

  3. Hypothesis Formation, Paradigms, and Openness

    Directory of Open Access Journals (Sweden)

    Conrad P. Pritscher

    2008-01-01

    Full Text Available A part of hypothesis formation, while necessary for scientific investigation, is beyond direct observation. Powerful hypothesis formation is more than logical and is facilitated by mind­opening. As Percy Bridgeman, Nobel laureate, said, science is: “Nothing more than doing one's damnedest with one's mind, no holds barred.” This paper suggests more open schooling helps generate more open hypothesizing which helps one do one's damnedest with one's mind. It is hypothesized that a more open process of hypothesis formation may help schools and society forge new ways of living and learning so that more people more often can do their damnedest with their mind. This writing does not offer a new paradigm but rather attempts to elaborate on the notion that new paradigms are difficult to form without openness to what was previously quasi­unthinkable. More on these topics and issues is included in the author's Reopening Einstein's Thought: About What Can't Be Learned From Textbooks ­­to be published by Sense Publishers in June 2008.

  4. Kinetic competition during glass formation

    Energy Technology Data Exchange (ETDEWEB)

    Perepezko, J.H., E-mail: perepezk@engr.wisc.edu [University of Wisconsin-Madison, Department of Materials Science and Engineering, 1509 University Ave., Madison, WI 53706 (United States); Santhaweesuk, C.; Wang, J.Q. [University of Wisconsin-Madison, Department of Materials Science and Engineering, 1509 University Ave., Madison, WI 53706 (United States); Imhoff, S.D. [Los Alamos National Laboratory, Materials Science and Technology Div., Los Alamos, NM 87545 (United States)

    2014-12-05

    Highlights: • The kinetics of glass formation has been elucidated in an Fe and Au-base alloy. • A critical cooling rate range should be considered for glass formation. • Wedge casting, calorimetry and upquenching data are used to model TTT curves. - Abstract: For vitrification of an alloy melt during cooling there is a kinetic competition with the nucleation and growth of metastable and stable crystalline phases. Many of the measures of glass forming ability (GFA) attempt to capture some of the features of the kinetic competition, but the GFA metrics are static measures and the kinetic processes are dynamic in nature. In fact, the critical cooling rate for glass formation should be viewed in terms of a critical cooling rate range to acknowledge the stochastic nature of crystal nucleation behavior. Direct measurements of the critical cooling rate range confirm this behavior and also provide useful input for kinetics analysis. Usually kinetics analyses are based upon crystallization behavior that is measured either isothermally or upon heating to temperatures near the crystallization onset, T{sub x} and the results are extrapolated to much higher temperatures. This practice is based upon a number of assumptions about transport behavior in the undercooled liquid. With rapid up-quenching of amorphous samples, the high temperature crystallization behavior can be measured and used to refine the kinetics analysis and provide useful insight on the kinetic competition and glass forming ability.

  5. Interactions, Starbursts, and Star Formation

    Directory of Open Access Journals (Sweden)

    Johan H. Knapen

    2015-12-01

    Full Text Available We study how interactions between galaxies affect star formation within them by considering a sample of almost 1500 of the nearest galaxies, all within a distance of ∼45 Mpc. We use the far-IR emission to define the massive star formation rate (SFR, and then normalise the SFR by the stellar mass of the galaxy to obtain the specific star formation rate (SSFR. We explore the distribution of (SSFR with morphological type and with stellar mass. We calculate the relative enhancement of SFR and SSFR for each galaxy by normalising them by the median SFR and SSFR values of individual control samples of similar non-interacting galaxies. We find that both the median SFR and SSFR are enhanced in interacting galaxies, and more so as the degree of interaction is higher. The increase is moderate, reaching a maximum of a factor of 1.9 for the highest degree of interaction (mergers. While the SFR and SSFR are enhanced statistically by interactions, in many individual interacting galaxies they are not enhanced at all. Our study is based on a representative sample of nearby galaxies and should be used to place constraints on studies based on samples of galaxies at larger distances.

  6. Reference: 322 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available gene, ROOT PRIMORDIUM DEFECTIVE 1, is required for the maintenance of active cell proliferation. 2 591-602 16407439 2006 Feb Plant physiology Konishi Mineko|Sugiyama Munetaka ... 322 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u16407439i Konishi Mineko et al. 2006 Fe...) produce adventitious roots in response to exogenously supplied auxin. root primordium defective 1 (rpd1) i...When adventitious root formation was induced from the rpd1 explants at the restrictive temperature, cell prolife...m formation. The expression patterns of the auxin-responsive gene DR5:beta-glucur

  7. Formation mechanisms of metal colloids

    Science.gov (United States)

    Halaciuga, Ionel

    Highly dispersed uniform metallic particles are widely used in various areas of technology and medicine and are likely to be incorporated into many other applications in the future. It is commonly accepted that size, shape and composition of the particles represent critical factors in most applications. Thus, understanding the mechanisms of formation of metal particles and the ways to control the physical (e.g. shape, size) and chemical (e.g. composition) properties is of great importance. In the current research, the formation of uniform silver spheres is investigated experimentally. The parameters that influence the formation of silver particles when concentrated iso-ascorbic acid and silver-polyamine complex solutions are rapidly mixed were studied in the absence of dispersants. We found that by varying the nature of the amine, temperature, concentration of reactants, silver/amine molar ratio, and the nature of the silver salt, the size of the resulting silver particles can be varied in a wide range (0.08--1.5 microm). The silver particles were formed by aggregation of nanosize subunits as substantiated by both electron microscopy and X-ray diffraction techniques and by the vivid rapid color changes during the chemical precipitation process. From the practical standpoint, the goal of this research was to prepare well dispersed spherical silver particles having a relatively smooth surface and a diameter of about 1 microm to satisfy the demands of the current electronic materials market. A two stage particle growth model previously developed to explain the narrow size distribution occurring in synthesis of gold spheres was applied to the present experimental system, and the parameters that control the size distribution characteristics were identified. The kinetic parameter required to match the final particle size was found to be in agreement with the one used previously in modeling formation of gold spheres, suggesting that similar kinetics governs the

  8. Core formation in silicate bodies

    Science.gov (United States)

    Nimmo, F.; O'Brien, D. P.; Kleine, T.

    2008-12-01

    Differentiation of a body into a metallic core and silicate mantle occurs most efficiently if temperatures are high enough to allow at least the metal to melt [1], and is enhanced if matrix deformation occurs [2]. Elevated temperatures may occur due to either decay of short-lived radio-isotopes, or gravitational energy release during accretion [3]. For bodies smaller than the Moon, core formation happens primarily due to radioactive decay. The Hf-W isotopic system may be used to date core formation; cores in some iron meteorites and the eucrite parent body (probably Vesta) formed within 1 My and 1-4~My of solar system formation, respectively [4]. These formation times are early enough to ensure widespread melting and differentiation by 26Al decay. Incorporation of Fe60 into the core, together with rapid early mantle solidification and cooling, may have driven early dynamo activity on some bodies [5]. Iron meteorites are typically depleted in sulphur relative to chondrites, for unknown reasons [6]. This depletion contrasts with the apparently higher sulphur contents of cores in larger planetary bodies, such as Mars [7], and also has a significant effect on the timing of core solidification. For bodies of Moon-size and larger, gravitational energy released during accretion is probably the primary cause of core formation [3]. The final stages of accretion involve large, stochastic collisions [8] between objects which are already differentiated. During each collision, the metallic cores of the colliding objects merge on timescales of a few hours [9]. Each collision will reset the Hf-W isotopic signature of both mantle and core, depending on the degree to which the impactor core re-equilibrates with the mantle of the target [10]. The re-equilibration efficiency depends mainly on the degree to which the impactor emulsifies [11], which is very uncertain. Results from N-body simulations [8,12] suggest that significant degrees of re- equilibration are required [4,10]. Re

  9. MHD turbulence, cloud formation and star formation in the ISM

    CERN Document Server

    Vázquez-Semadeni, E; Pouquet, A

    1996-01-01

    We discuss the role of turbulence in cloud and star formation, as observed in numerical simulations of the interstellar medium. Turbulent compression at the interfaces of colliding gas streams is responsible for the formation of intermediate (\\simlt 100 pc) and small clouds (a few tens of pc), although the smallest clouds can also form from fragmentation of expanding shells around stellar heating centers. The largest cloud complexes (several hundred pc) seem to form by slow, gravitational instability-driven merging of individual clouds, which can actually be described as a large-scale tendency towards homogenization of the flow due to gravity rather than cloud collisions. These mechanisms operate as well in the presence of a magnetic field and rotation, although slight variations on the compressibility and cloud morphology are present which depend on the strength and topology of the field. In summary, the role of turbulence in the life-cycle of clouds appears to be twofold: small-scale modes contribute to clo...

  10. On-Going Galaxy Formation

    Science.gov (United States)

    Braine, Jonathan; Duc, P.-A.; Lisenfeld, U.; Charmandaris, V.; Vallejo, O.; Leon, S.; Brinks, E.

    2002-07-01

    We investigate the process of galaxy formation as can be observed in the only currently forming galaxies - the so-called Tidal Dwarf Galaxies, hereafter TDGs - through observations of the molecular gas detected via its CO (Carbon Monoxide) emission. These objects are formed of material torn off of the outer parts of a spiral disk due to tidal forces in a collision between two massive galaxies. Molecular gas is a key element in the galaxy formation process, providing the link between a cloud of gas and a bona fide galaxy. We have detected CO in 8 TDGs (Braine, Lisenfeld, Duc and Leon, 2000: Nature 403, 867; Braine, Duc, Lisenfeld, Charmandaris, Vallejo, Leon and Brinks: 2001, A&A 378, 51), with an overall detection rate of 80%, showing that molecular gas is abundant in TDGs, up to a few 108 M ⊙. The CO emission coincides both spatially and kinematically with the HI emission, indicating that the molecular gas forms from the atomic hydrogen where the HI column density is high. A possible trend of more evolved TDGs having greater molecular gas masses is observed, in accord with the transformation of HI into H2. Although TDGs share many of the properties of small irregulars, their CO luminosity is much greater (factor ˜ 100) than that of standard dwarf galaxies of comparable luminosity. This is most likely a consequence of the higher metallicity (≳sim 1/3 solar) of TDGs which makes CO a good tracer of molecular gas. This allows us to study star formation in environments ordinarily inaccessible due to the extreme difficulty of measuring the molecular gas mass. The star formation efficiency, measured by the CO luminosity per Hα flux, is the same in TDGs and full-sized spirals. CO is likely the best tracer of the dynamics of these objects because some fraction of the HI near the TDGs may be part of the tidal tail and not bound to the TDG. Although uncertainties are large for individual objects, as the geometry is unknown, our sample is now of eight detected objects

  11. Mechanism of formation of hydantoins

    Energy Technology Data Exchange (ETDEWEB)

    Worman, J.J.; Uhrich, K.; Olson, E.; Diehl, J.; Farnum, S.; Hawthorne, S.

    1985-10-01

    Hydantoins, (I), are biologically active compounds which occur in nature and have been isolated from such sources as sugar beets and butterfly wings. Synthetic analogs have found widespread use as anticonvulsant drugs, bacteriocides, stabilizers in photographic film, and in the preparation of high temperature epoxy resins. Uses, preparation, and reactions of hydantoins have been extensively studied and are reported elsewhere. Recently a number of hydantoin isomers have been detected and identified in coal gasification condensate water from the gasification of Indian Head (ND) lignite in a slagging fixed bed gasifier. The hydantoins constitute a major portion of the organics in the condensate water. In generation the concentrations of hydantoins found in the condensate water from an ash gasifier are smaller than those found from the slagging process. Lignite coal reacting in a slagging gasifier gives the largest concentration of hydantoins in the condensate water. The major isomer in the coal gasification condensate water is 5,5-dimethylhydantoin (DMH). DMH is formed from individual species (acetone, cyanide, ammonia, and carbonate) in the condensate water and does not form directly in the gasifier. The rate of formation of DMH was first order in all of the reactants as expressed by the equation: Rate of formation of DMH = (Acetone) (HCN) (NH/sub 3/) (CO/sub 2/). This kinetic data is valuable in predicting the rate of formation of DMH in coal gasification condensate water, provided the model is applicable. A mechanism consistent with the kinetic data and partially verified by others is shown in Scheme 1. 13 refs.

  12. DIKE FORMATION WITH SUBMERGED VANE

    Institute of Scientific and Technical Information of China (English)

    Umesh P.GUPTA; C.S.P.OJHA; Nayan SHARMA

    2006-01-01

    Submerged vanes are submerged foils constructed in a river at an angle of attack to induce horizontal circulation in the downstream flow. The initial height of vanes is 0.2 - 0.4 times the local water depth (d) at the design stage. Its length expressed as a multiple of the height to length ratio (H/L) normally is 0.25 to 0.5. With the use of a submerged vane in straight channels, dikes (heaps of sediment) were formed downstream. At an optimal angle of attack of 40o and at a Froude number of 0.25, the formation of the dike starts at some distance from the trailing edge of the rectangular and trapezoidal submerged vanes with a collar. A significant scour hole results at the trailing edge of a vane with a collar. A typical dike formed along the vane on the suction side with a symmetric bell-shaped profile. The dike formation phenomenon triggered by a vane close to the bank-line at a flow with a relatively higher Froude number, such as 0.25, does not seem to follow a straight alignment, but has a sort of curvilinear shape bent towards the suction side. The dike formation process for a flow with a smaller Froude number, such as 0.13, is observed to not be appreciable. With the same installation height of H, a vane without a collar was dislodged by the flow at a Froude number of 0.25, whereas it was stable at a Froude number of 0.13.

  13. Dark Matter and Galaxy Formation

    Science.gov (United States)

    Primack, Joel R.

    2009-12-01

    The four lectures that I gave in the XIII Ciclo de Cursos Especiais at the National Observatory of Brazil in Rio in October 2008 were (1) a brief history of dark matter and structure formation in a ΛCDM universe; (2) challenges to ΛCDM on small scales: satellites, cusps, and disks; (3) data on galaxy evolution and clustering compared with simulations; and (4) semi-analytic models. These lectures, themselves summaries of much work by many people, are summarized here briefly. The slides [1] contain much more information.

  14. Dark Matter and Galaxy Formation

    CERN Document Server

    Primack, Joel R

    2009-01-01

    The four lectures that I gave in the XIII Ciclo de Cursos Especiais at the National Observatory of Brazil in Rio in October 2008 were (1) a brief history of dark matter and structure formation in a LambdaCDM universe; (2) challenges to LambdaCDM on small scales: satellites, cusps, and disks; (3) data on galaxy evolution and clustering compared with simulations; and (4) semi-analytic models. These lectures, themselves summaries of much work by many people, are summarized here briefly.

  15. Quality guidance and quality formation

    DEFF Research Database (Denmark)

    Poulsen, Carsten Stig; Juhl, Hans Jørn; Kristensen, Kai

    1996-01-01

    This paper presents an extension of the quality guidance model of Steenkamp and van Trijp that includes consumer quality formation processes. Quality expectations and quality experiences are seen as antecedents of perceived overall product quality conceptual model is applied using LISREL to a data...... set on Danish butter cookies. Five plausible models of the relation between expectation, experience and perceived product quality are estimated. Finally one model is selected on the basis of three criteria: chi-square, RMSEA and AIC: The results show a model where expectations are indirectly related...... to perceived quality through experience. Udgivelsesdato: APR...

  16. Adsorption-induced step formation

    DEFF Research Database (Denmark)

    Thostrup, P.; Christoffersen, Ebbe; Lorensen, Henrik Qvist

    2001-01-01

    Through an interplay between density functional calculations, Monte Carlo simulations and scanning tunneling microscopy experiments, we show that an intermediate coverage of CO on the Pt(110) surface gives rise to a new rough equilibrium structure with more than 50% step atoms. CO is shown to bin...... so strongly to low-coordinated Pt atoms that it can break Pt-Pt bonds and spontaneously form steps on the surface. It is argued that adsorption-induced step formation may be a general effect, in particular at high gas pressures and temperatures....

  17. IRIG Serial Time Code Formats

    Science.gov (United States)

    2016-08-01

    by Secretariat Range Commanders Council U.S. Army White Sands Missile Range, New Mexico 88002-5110 This page intentionally left blank. IRIG...New Mexico 88002-5110 Phone: DSN 258-1107 Com (575) 678-1107 Fax: DSN 258-7519 Com (575) 678-7519 Email: usarmy.wsmr.atec.list.rcc@mail.mil...and G. It should be noted that this standard reflects the present state of the art in serial time code formatting and is not intended to constrain

  18. Graphene mediated magnetic domain formation

    Science.gov (United States)

    Tanabe, Iori; Wang, Yi; Kong, Lingmei; Binek, Christian; Pasquale, Frank; Cao, Yuan; Dong, Bin; Kelber, Jeffry; Dowben, Peter

    2014-03-01

    Both graphene on Co and graphene on Co3O4/Co samples were investigate by the Raman spectroscopy and longitudinal magneto-optic Kerr effect (MOKE). While the graphene on Co (111) bilayer thin films exhibited high remnant magnetization in plane easy axis ferromagnetism, the graphene/Co3O4/Co trilayers exhibited little remnant magnetization. The latter is due to formation of a complex multidomain state at zero applied field. The role of graphene and Co3O4 will be discussed.

  19. The formation of interstellar jets

    Science.gov (United States)

    Tenorio-Tagle, G.; Canto, J.; Rozyczka, M.

    1988-01-01

    The formation of interstellar jets by convergence of supersonic conical flows and the further dynamical evolution of these jets are investigated theoretically by means of numerical simulations. The results are presented in extensive graphs and characterized in detail. Strong radiative cooling is shown to result in jets with Mach numbers 2.5-29 propagating to lengths 50-100 times their original widths, with condensation of swept-up interstellar matter at Mach 5 or greater. The characteristics of so-called molecular outflows are well reproduced by the simulations of low-Mach-number and quasi-adiabatic jets.

  20. The multifaceted planetesimal formation process

    DEFF Research Database (Denmark)

    Johansen, Anders; Blum, Jürgen; Tanaka, Hidekazu

    2013-01-01

    Accumulation of dust and ice particles into planetesimals is an important step in the planet formation process. Planetesimals are the seeds of both terrestrial planets and the solid cores of gas and ice giants forming by core accretion. Left-over planetesimals in the form of asteroids, trans...... micrometer-sized dust and ice to bodies which can undergo run-away accretion. The latter ranges in size from 1 km to 1000 km, dependent on the planetesimal eccentricity excited by turbulent gas density fluctuations. Particles face many barriers during this growth, arising mainly from inefficient sticking...

  1. Branch formation during organ development

    Science.gov (United States)

    Gjorevski, Nikolce; Nelson, Celeste M.

    2010-01-01

    Invertebrates and vertebrates use branching morphogenesis to build epithelial trees to maximize the surface area of organs within a given volume. Several molecular regulators of branching have recently been discovered, a number of which are conserved across different organs and species. Signals that control branching at the cellular and tissue levels are also starting to emerge, and are rapidly unveiling the physical nature of branch development. Here we discuss the molecular, cellular and physical processes that govern branch formation and highlight the major outstanding questions in the field. PMID:20890968

  2. Austenite formation during intercritical annealing

    OpenAIRE

    A. Lis; J. Lis

    2008-01-01

    Purpose: of this paper is the effect of the soft annealing of initial microstructure of the 6Mn16 steel on the kinetics of the austenite formation during next intercritical annealing.Design/methodology/approach: Analytical TEM point analysis with EDAX system attached to Philips CM20 was used to evaluate the concentration of Mn, Ni and Cr in the microstructure constituents of the multiphase steel and mainly Bainite- Martensite islands.Findings: The increase in soft annealing time from 1-60 hou...

  3. Massive neutrinos and galaxy formation

    CERN Document Server

    Ma Chung Pei

    1994-01-01

    We report the most recent results from high-resolution numerical simulations of structure formation in two flat cold+hot dark matter models with neutrino mass densities \\onu=0.2 and 0.3. We find that structure forms too late in all CDM+HDM models with \\onu>0.2 to account for the amount of dense neutral gas in high-redshift damped Lyman-\\alpha systems. The \\onu=0.2 model at z\\approx0 provides a better match to observations than the pure CDM model.

  4. Quality guidance and quality formation

    DEFF Research Database (Denmark)

    Poulsen, Carsten Stig; Juhl, Hans Jørn; Kristensen, Kai

    1996-01-01

    This paper presents an extension of the quality guidance model of Steenkamp and van Trijp that includes consumer quality formation processes. Quality expectations and quality experiences are seen as antecedents of perceived overall product quality conceptual model is applied using LISREL to a data...... set on Danish butter cookies. Five plausible models of the relation between expectation, experience and perceived product quality are estimated. Finally one model is selected on the basis of three criteria: chi-square, RMSEA and AIC: The results show a model where expectations are indirectly related...... to perceived quality through experience. Udgivelsesdato: APR...

  5. Formation flight astronomical survey telescope

    Science.gov (United States)

    Tsunemi, Hiroshi

    2012-03-01

    Formation Flight Astronomical Survey Telescope (FFAST) is a project for hard X-ray observation. It consists of two small satellites; one (telescope satellite) has a super mirror covering the energy range up to 80 keV while the other (detector satellite) has an scintillator deposited CCD (SDCCD) having good spatial resolution and high efficiency up to 100 keV. Two satellites will be put into individual Kepler orbits forming an X-ray telescope with a focal length of 20 m. They will be not in pointing mode but in survey mode to cover a large sky region.

  6. Stability on Adaptive NN Formation Control with Variant Formation Patterns and Interaction Topologies

    Directory of Open Access Journals (Sweden)

    Xin Chen

    2008-03-01

    Full Text Available The formation task achieved by multiple robots is a tough issue in practice, because of the limitations of the sensing abilities and communicating functions among them. This paper investigates the decentralized formation control in case of parameter uncertainties, bounded disturbances, and variant interactions among robots. To design decentralized controller, a formation description is firstly proposed, which consists of two aspects in terms of formation pattern and interaction topology. Then the formation control using adaptive neural network (ANN is proposed based on the relative error derived from formation description. From the analysis on stability of the formation control under invariant/variant formation pattern and interaction topology, it is concluded that if formation pattern is of class Ck, k ≥1, and interaction graph is connected and changed with finite times, the convergence of the formation control is guaranteed, so that robots must form the formation described by the formation pattern.

  7. Stability on Adaptive NN Formation Control with Variant Formation Patterns and Interaction Topologies

    Directory of Open Access Journals (Sweden)

    Yangmin Li

    2008-11-01

    Full Text Available The formation task achieved by multiple robots is a tough issue in practice, because of the limitations of the sensing abilities and communicating functions among them. This paper investigates the decentralized formation control in case of parameter uncertainties, bounded disturbances, and variant interactions among robots. To design decentralized controller, a formation description is firstly proposed, which consists of two aspects in terms of formation pattern and interaction topology. Then the formation control using adaptive neural network (ANN is proposed based on the relative error derived from formation description. From the analysis on stability of the formation control under invariant/variant formation pattern and interaction topology, it is concluded that if formation pattern is of class kC, 1k≥ , and interaction graph is connected and changed with finite times, the convergence of the formation control is guaranteed, so that robots must form the formation described by the formation pattern.

  8. The Formation of English Cyber- neologism

    Institute of Scientific and Technical Information of China (English)

    曹琪雯

    2014-01-01

    Based on the lexical word-building process, this paper firstly analyzes the characteristics of English cyber-neologism and then explores the formations of it in recent ten years, and finally discusses its influence on the formation of Chinese.

  9. Molecular mechanism of bone formation and regeneration

    Institute of Scientific and Technical Information of China (English)

    Akira Yamaguchi

    2008-01-01

    @@ Bone formation and regeneration are mediated by the coordinate action of various factors. Among these, bone morphogenetic protein (BMP) and runt-related gene 2 (Runx2) play crucial roles in bone formation.

  10. Choosing to write the paper format thesis.

    Science.gov (United States)

    Morris, H M; Tipples, G

    1998-04-01

    Graduate students today may be faced with the option of writing either a traditional format thesis or a paper format thesis. In contrast to the traditional format in which the text body consists of four or five chapters, the body of the paper format thesis can be comprised of an introductory chapter, two or more papers written as publishable manuscripts, and a conclusion. In this article, an overview of the paper format thesis is presented and contrasted with the traditional format thesis. The description of the paper format thesis is followed by its advantages and disadvantages for writers and readers. It is by weighing all possible pros and cons, as well as considering one's individual situation, that the graduate student will be able to decide which format of thesis to write.

  11. XML Format for SESAME and LEOS

    Energy Technology Data Exchange (ETDEWEB)

    Durrenberger, J K; Neely, J R; Sterne, P A

    2009-04-29

    The objective of this document is to describe the XML format used by LLNL and LANL to represent the equation-of-state and related material information in the LEOS and SESAME data libraries. The primary purpose of this document is to describe a specific XML format for representing EOS data that is tailored to the nature of the underlying data and is amenable to conversion to both legacy SESAME and LEOS binary formats. The secondary purpose is to describe an XML format that lends itself to a 'natural' representation in a binary file format of the SESAME, pdb or hdf5 form so that this format and related tools can be used for the rapid and efficient development and implementation of prototype data structures. This document describes the XML format only. A working knowledge of LEOS and SESAME formats is assumed.

  12. SAR polar format implementation with MATLAB.

    Energy Technology Data Exchange (ETDEWEB)

    Martin, Grant D.; Doerry, Armin Walter

    2005-11-01

    Traditional polar format image formation for Synthetic Aperture Radar (SAR) requires a large amount of processing power and memory in order to accomplish in real-time. These requirements can thus eliminate the possible usage of interpreted language environments such as MATLAB. However, with trapezoidal aperture phase history collection and changes to the traditional polar format algorithm, certain optimizations make MATLAB a possible tool for image formation. Thus, this document's purpose is two-fold. The first outlines a change to the existing Polar Format MATLAB implementation utilizing the Chirp Z-Transform that improves performance and memory usage achieving near realtime results for smaller apertures. The second is the addition of two new possible image formation options that perform a more traditional interpolation style image formation. These options allow the continued exploration of possible interpolation methods for image formation and some preliminary results comparing image quality are given.

  13. FORMATE-BASED FLUIDS: FORMULATION AND APPLICATION

    Directory of Open Access Journals (Sweden)

    Nediljka Gaurina-Međimurec

    2008-12-01

    Full Text Available Formate-based fluids has been successfully used in over hunders HPHT well operations since they introduced in field practice. They have many advantages when compared with conventional HPHT drilling and completion fluids such as: minimal formation damage, maintenance of additve properties at high temperatures, reduced hydraulic flow resistance, low potential for differential sticking, naturally lubricating, very low corrosion rates, biodegradable and pose little risk to the environment etc. Formate-based fluids can be applied during deep slim hole drilling, shale drilling, reservoir drilling, salt and gas hydrate formations drilling. The laboratory research was carried out to evaluate the rheological behavior of formate-based fluids as a function of temperature. Formate-based fluids were formulated using potassium formate brine, xanthan polymer, PAC, starch and calcium carbonate. Experimental results show that potassium formate improves the thermal stability of polymers.

  14. On the modelling of river delta formation

    NARCIS (Netherlands)

    Geleynse, N.

    2013-01-01

    This thesis presents approaches to the modelling of river delta formation. In particular, it provides results of numerical stratigraphic-morphodynamic modelling of river delta formation under various environmental forcings.

  15. The Current Status of Galaxy Formation

    CERN Document Server

    Silk, Joe

    2012-01-01

    Understanding galaxy formation is one of the most pressing issues in cosmology. We review the current status of galaxy formation from both an observational and a theoretical perspective, and summarise the prospects for future advances.

  16. Tube Formation in Nanoscale Materials

    Directory of Open Access Journals (Sweden)

    Yan Chenglin

    2008-01-01

    Full Text Available Abstract The formation of tubular nanostructures normally requires layered, anisotropic, or pseudo-layered crystal structures, while inorganic compounds typically do not possess such structures, inorganic nanotubes thus have been a hot topic in the past decade. In this article, we review recent research activities on nanotubes fabrication and focus on three novel synthetic strategies for generating nanotubes from inorganic materials that do not have a layered structure. Specifically, thermal oxidation method based on gas–solid reaction to porous CuO nanotubes has been successfully established, semiconductor ZnS and Nb2O5nanotubes have been prepared by employing sacrificial template strategy based on liquid–solid reaction, and an in situ template method has been developed for the preparation of ZnO taper tubes through a chemical etching reaction. We have described the nanotube formation processes and illustrated the detailed key factors during their growth. The proposed mechanisms are presented for nanotube fabrication and the important pioneering studies are discussed on the rational design and fabrication of functional materials with tubular structures. It is the intention of this contribution to provide a brief account of these research activities.

  17. Formation number for vortex dipoles

    Science.gov (United States)

    Sadri, Vahid; Krueger, Paul S.

    2016-11-01

    This investigation considers the axisymmetric formation of two opposite sign concentric vortex rings from jet ejection between concentric cylinders. This arrangement is similar to planar flow in that the vortex rings will travel together when the gap between the cylinders is small, similar to a vortex dipole, but it has the advantage that the vortex motion is less constrained than the planar case (vortex stretching and vortex line curvature is allowed). The flow was simulated numerically at a jet Reynolds number of 1,000 (based on ΔR and the jet velocity), jet pulse length-to-gap ratio (L / ΔR) in the range 10-20, and gap-to-outer radius ratio (ΔR /Ro) in the range 0.01-0.1. Small gap ratios were chosen for comparison with 2D results. In contrast with 2D results, the closely paired vortices in this study exhibited pinch-off from the generating flow and finite formation numbers. The more complex flow evolution afforded by the axisymmetric model and its influence on the pinch-off process will be discussed. This material is based on work supported by the National Science Foundation under Grant No. 1133876 and SMU. This supports are gratefully acknowledged.

  18. Simulations for terrestrial planets formation

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    In this paper,the formation of terrestrial planets in the late stage of planetary formation is investigated using the two-planet model.At that time,the protostar formed for about 3 Ma and the gas disk dissipated.In the model,the perturbations from Jupiter and Saturn are considered.Variations of the mass of outer planet,and the initial eccentricities and inclinations of embryos and planetesimals are also considered.Our results show that,terrestrial planets are formed in 50 Ma,and the accretion rate is about 60%-80%.In each simulation,3-4 terrestrial planets are formed inside"Jupiter"with masses of 0.15 -3.6M⊕.In the 0.5-4 AU,when the eccentricities of planetesimals are excited,planetesimals are able to accrete material from wide radial direction.The plenty of water material of the terrestrial planet in the Habitable Zone may be transferred from the farther places by this mechanism.Accretion could also happen a few times between two major planets only if the outer planet has a moderate mass and the small terrestrial planet could survive at some resonances over time scale of 10 8 a.In one of our simulations,commensurability of the orbital periods of planets is very common.Moreover,a librating-circulating 3:2 configuration of mean motion resonance is found.

  19. Simulations for terrestrial planets formation

    Institute of Scientific and Technical Information of China (English)

    ZHANG Niu; JI JiangHui

    2009-01-01

    In this paper, the formation of terrestrial planets in the late stage of planetary formation is Investigated using the two-planet model. At that time, the protostar formed for about 3 Ma and the gas disk dissipated. In the model, the perturbations from Jupiter and Saturn are considered. Variations of the mass of outer planet, and the initial eccentricities and inclinations of embryos and planetesimals are also considered. Our results show that, terrestrial planets are formed in 50 Ma, and the accretion rate is about 60%-80%. In each simulation, 3-4 terrestrial planets are formed inside "Jupiter" with masses of 0.15-3.6 M(⊙). In the 0.5-4 AU, when the eccentricities of planetesimals are excited, planetesimals are able to accrete material from wide radial direction. The plenty of water material of the terrestrial planet in the Habitable Zone may be transferred from the farther places by this mechanism. Accretion could also happen a few times between two major planets only if the outer planet has a moderate mass and the small terrestrial planet could survive at some resonances over time scale of 108a. In one of our simulations, commensurability of the orbital periods of planets is very common. Moreover, a librating-circulating 3:2 configuration of mean motion resonance is found.

  20. Iloprost induces tertiary dentin formation.

    Science.gov (United States)

    Limjeerajarus, Chalida Nakalekha; Chanarattanubol, Thichaporn; Trongkij, Panruethai; Rujiwanichkul, Mirantee; Pavasant, Prasit

    2014-11-01

    Prostacyclin (PGI2), a member of the prostaglandin family, can promote angiogenesis and cell proliferation. In this study, the effect of the application of a PGI2 analog (iloprost) on dentin repair was examined in vitro and in vivo. Iloprost significantly stimulated the expression of vascular endothelial growth factor and osteo-/odontogenic marker messenger RNA in human dental pulp cells (HDPCs) under osteoinductive conditions in vitro. In addition, iloprost enhanced HDPC alkaline phosphatase enzymatic activity and mineral deposition. An in vivo study was performed using a rat molar mechanical pulp exposure model. After 30 days, histologic analysis revealed that there was a dramatic tertiary dentin formation in the iloprost-treated group compared with the calcium hydroxide and the untreated control groups. Furthermore, vascular endothelial growth factor protein expression in dental pulp tissue was increased in the iloprost-treated group as determined by immunohistochemical staining. Taken together, the present study, for the first time, shows that iloprost induces the expression of osteo-/odontogenic markers in vitro and promotes angiogenic factor expression and enhances tertiary dentin formation in vivo. This implies the potential clinical usefulness of iloprost in vital pulp therapy. Copyright © 2014 American Association of Endodontists. Published by Elsevier Inc. All rights reserved.