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Sample records for coral reef waters

  1. Water Quality Standards for Coral Reef Protection

    Science.gov (United States)

    The U.S. Clean Water Act provides a legal framework to protect coastal biological resources such as coral reefs, mangrove forests, and seagrass meadows from the damaging effects of human activities. Even though many resources are protected under this authority, water quality stan...

  2. Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems

    NARCIS (Netherlands)

    Rix, L.; de Goeij, J.M.; Mueller, C.E.; Struck, U.; Middelburg, J.J.; van Duyl, F.C.; Al-Horani, F.A.; Wild, C.; Naumann, M.S.; van Oevelen, D.

    2016-01-01

    Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and

  3. Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems

    NARCIS (Netherlands)

    Rix, L.; de Goeij, J.M.; Mueller, C.E.; Struck, U.; Middelburg, J.J.; van Duyl, F.C.; Al-Horani, F.A.; Wild, C.; Naumann, M.S.; Van Oevelen, D.

    2016-01-01

    Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrient

  4. Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems

    NARCIS (Netherlands)

    Rix, L.; de Goeij, J.M.; Mueller, C.E.; Struck, U.; Middelburg, J.J.; van Duyl, F.C.; Al-Horani, F.A.; Wild, C.; Naumann, M.S.; Van Oevelen, D.

    2016-01-01

    Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrient

  5. Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems.

    Science.gov (United States)

    Rix, Laura; de Goeij, Jasper M; Mueller, Christina E; Struck, Ulrich; Middelburg, Jack J; van Duyl, Fleur C; Al-Horani, Fuad A; Wild, Christian; Naumann, Malik S; van Oevelen, Dick

    2016-01-07

    Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrients in DOM to higher trophic levels on Caribbean reefs via the so-called sponge loop. Coral mucus may be a major DOM source for the sponge loop, but mucus uptake by sponges has not been demonstrated. Here we used laboratory stable isotope tracer experiments to show the transfer of coral mucus into the bulk tissue and phospholipid fatty acids of the warm-water sponge Mycale fistulifera and cold-water sponge Hymedesmia coriacea, demonstrating a direct trophic link between corals and reef sponges. Furthermore, 21-40% of the mucus carbon and 32-39% of the nitrogen assimilated by the sponges was subsequently released as detritus, confirming a sponge loop on Red Sea warm-water and north Atlantic cold-water coral reefs. The presence of a sponge loop in two vastly different reef environments suggests it is a ubiquitous feature of reef ecosystems contributing to the high biogeochemical cycling that may enable coral reefs to thrive in nutrient-limited (warm-water) and energy-limited (cold-water) environments.

  6. Water Quality Standards for Coral Reef Protection | Science ...

    Science.gov (United States)

    The U.S. Clean Water Act provides a legal framework to protect coastal biological resources such as coral reefs, mangrove forests, and seagrass meadows from the damaging effects of human activities. Even though many resources are protected under this authority, water quality standards have not been effectively applied to coral reefs. The Environmental Protection Agency is promoting biocriteria and other water quality standards through collaborative development of bioassessment procedures, indicators and monitoring strategies. To support regulatory action, bioassessment indicators must be biologically meaningful, relevant to management, responsive to human disturbance, and relatively immune to natural variability. A rapid bioassessment protocol for reef-building stony corals was developed and tested for regulatory applicability. Preliminary testing in the Florida Keys found indicators had sufficient precision and provided information relevant to coral reef management. Sensitivity to human disturbance was demonstrated in the U.S. Virgin Islands for five of eight indicators tested. Once established, monitoring programs using these indicators can provide valuable, long-term records of coral condition and regulatory compliance. Development of a rapid bioassement protocol for reef-building stony corals was tested for regulatory applicability.

  7. Processes Driving Natural Acidification of Western Pacific Coral Reef Waters

    Science.gov (United States)

    Shamberger, K. E.; Cohen, A. L.; Golbuu, Y.; McCorkle, D. C.; Lentz, S. J.; Barkley, H. C.

    2013-12-01

    Rising levels of atmospheric carbon dioxide (CO2) are acidifying the oceans, reducing seawater pH, aragonite saturation state (Ωar) and the availability of carbonate ions (CO32-) that calcifying organisms use to build coral reefs. Today's most extensive reef ecosystems are located where open ocean CO32- concentration ([CO32-]) and Ωar exceed 200 μmol kg-1 and 3.3, respectively. However, high rates of biogeochemical cycling and long residence times of water can result in carbonate chemistry conditions within coral reef systems that differ greatly from those of nearby open ocean waters. In the Palauan archipelago, water moving across the reef platform is altered by both biological and hydrographic processes that combine to produce seawater pH, Ωar, [CO32-] significantly lower than that of open ocean source water. Just inshore of the barrier reefs, average Ωar values are 0.2 to 0.3 and pH values are 0.02 to 0.03 lower than they are offshore, declining further as water moves across the back reef, lagoon and into the meandering bays and inlets that characterize the Rock Islands. In the Rock Island bays, coral communities inhabit seawater with average Ωar values of 2.7 or less, and as low as 1.9. Levels of Ωar as low as these are not predicted to occur in the western tropical Pacific open ocean until near the end of the century. Calcification by coral reef organisms is the principal biological process responsible for lowering Ωar and pH, accounting for 68 - 99 % of the difference in Ωar between offshore source water and reef water at our sites. However, in the Rock Island bays where Ωar is lowest, CO2 production by net respiration contributes between 17 - 30 % of the difference in Ωar between offshore source water and reef water. Furthermore, the residence time of seawater in the Rock Island bays is much longer than at the well flushed exposed sites, enabling calcification and respiration to drive Ωar to very low levels despite lower net ecosystem

  8. A bioindicator system for water quality on inshore coral reefs of the Great Barrier Reef.

    Science.gov (United States)

    Fabricius, Katharina E; Cooper, Timothy F; Humphrey, Craig; Uthicke, Sven; De'ath, Glenn; Davidson, Johnston; LeGrand, Hélène; Thompson, Angus; Schaffelke, Britta

    2012-01-01

    Responses of bioindicator candidates for water quality were quantified in two studies on inshore coral reefs of the Great Barrier Reef (GBR). In Study 1, 33 of the 38 investigated candidate indicators (including coral physiology, benthos composition, coral recruitment, macrobioeroder densities and FORAM index) showed significant relationships with a composite index of 13 water quality variables. These relationships were confirmed in Study 2 along four other water quality gradients (turbidity and chlorophyll). Changes in water quality led to multi-faceted shifts from phototrophic to heterotrophic benthic communities, and from diverse coral dominated communities to low-diversity communities dominated by macroalgae. Turbidity was the best predictor of biota; hence turbidity measurements remain essential to directly monitor water quality on the GBR, potentially complemented by our final calibrated 12 bioindicators. In combination, this bioindicator system may be used to assess changes in water quality, especially where direct water quality data are unavailable. Copyright © 2011 Elsevier Ltd. All rights reserved.

  9. Water column correction for coral reef studies by remote sensing.

    Science.gov (United States)

    Zoffoli, Maria Laura; Frouin, Robert; Kampel, Milton

    2014-09-11

    Human activity and natural climate trends constitute a major threat to coral reefs worldwide. Models predict a significant reduction in reef spatial extension together with a decline in biodiversity in the relatively near future. In this context, monitoring programs to detect changes in reef ecosystems are essential. In recent years, coral reef mapping using remote sensing data has benefited from instruments with better resolution and computational advances in storage and processing capabilities. However, the water column represents an additional complexity when extracting information from submerged substrates by remote sensing that demands a correction of its effect. In this article, the basic concepts of bottom substrate remote sensing and water column interference are presented. A compendium of methodologies developed to reduce water column effects in coral ecosystems studied by remote sensing that include their salient features, advantages and drawbacks is provided. Finally, algorithms to retrieve the bottom reflectance are applied to simulated data and actual remote sensing imagery and their performance is compared. The available methods are not able to completely eliminate the water column effect, but they can minimize its influence. Choosing the best method depends on the marine environment, available input data and desired outcome or scientific application.

  10. Hydrogeology and hydrodynamics of coral reef pore waters

    Energy Technology Data Exchange (ETDEWEB)

    Buddemeier, R.W.; Oberdorfer, J.A.

    1988-06-29

    A wide variety of forces can produce head gradients that drive the flow and advective mixing of internal coral reef pore waters. Oscillatory gradients that produce mixing result from wave and tide action. Sustained gradients result from wave and tide-induced setup and ponding, from currents impinging on the reef structure, from groundwater heads, and from density differenced (temperature or salinity gradients). These gradients and the permeabilities and porosities of reef sediments are such that most macropore environments are dominated by advection rather than diffusion. The various driving forces must be analyzed to determine the individual and combined magnitudes of their effects on a specific reef pore-water system. Pore-water movement controls sediment diagenesis, the exchange of nutrients between sediments and benthos, and coastal/island groundwater resources. Because of the complexity of forcing functions, their interactions with specific local reef environments, experimental studies require careful incorporation of these considerations into their design and interpretation. 8 refs., 3 figs., 1 tab.

  11. Coral reefs - Specialized ecosystems

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.

    This paper discusses briefly some aspects that characterize and differentiate coral reef ecosystems from other tropical marine ecosystems. A brief account on the resources that are extractable from coral reefs, their susceptibility to natural...

  12. Coral Reef Ecosystems

    Science.gov (United States)

    Yap, Helen T.

    Coral reefs are geological structures of significant dimensions, constructed over millions of years by calcifying organisms. The present day reef-builders are hard corals belonging to the order Scleractinia, phylum Cnidaria. The greatest concentrations of coral reefs are in the tropics, with highest levels of biodiversity situated in reefs of the Indo-West Pacific region. These ecosystems have provided coastal protection and livelihood to human populations over the millennia. Human activities have caused destruction of these habitats, the intensity of which has increased alarmingly since the latter decades of the twentieth century. The severity of this impact is directly related to exponential growth rates of human populations especially in the coastal areas of the developing world. However, a more recently recognized phenomenon concerns disturbances brought about by the changing climate, manifested mainly as rising sea surface temperatures, and increasing acidification of ocean waters due to greater drawdown of higher concentrations of atmospheric carbon dioxide. Management efforts have so far not kept pace with the rates of degradation, so that the spatial extent of damaged reefs and the incidences of localized extinction of reef species are increasing year after year. The major management efforts to date consist of establishing marine protected areas and promoting the active restoration of coral habitats.

  13. Water column productivity and temperature predict coral reef regeneration across the Indo-Pacific.

    Science.gov (United States)

    Riegl, B; Glynn, P W; Wieters, E; Purkis, S; d'Angelo, C; Wiedenmann, J

    2015-02-05

    Predicted increases in seawater temperatures accelerate coral reef decline due to mortality by heat-driven coral bleaching. Alteration of the natural nutrient environment of reef corals reduces tolerance of corals to heat and light stress and thus will exacerbate impacts of global warming on reefs. Still, many reefs demonstrate remarkable regeneration from past stress events. This paper investigates the effects of sea surface temperature (SST) and water column productivity on recovery of coral reefs. In 71 Indo-Pacific sites, coral cover changes over the past 1-3 decades correlated negative-exponentially with mean SST, chlorophyll a, and SST rise. At six monitoring sites (Persian/Arabian Gulf, Red Sea, northern and southern Galápagos, Easter Island, Panama), over half of all corals were reefs in the northwest and central Indian Ocean, as well as the central west Pacific, are at highest risk of degradation, and those at high latitudes the least. The model pinpoints regions where coral reefs presently have the best chances for survival. However, reefs best buffered against temperature and nutrient effects are those that current studies suggest to be most at peril from future ocean acidification.

  14. Water column productivity and temperature predict coral reef regeneration across the Indo-Pacific

    Science.gov (United States)

    Riegl, B.; Glynn, P. W.; Wieters, E.; Purkis, S.; D'Angelo, C.; Wiedenmann, J.

    2015-02-01

    Predicted increases in seawater temperatures accelerate coral reef decline due to mortality by heat-driven coral bleaching. Alteration of the natural nutrient environment of reef corals reduces tolerance of corals to heat and light stress and thus will exacerbate impacts of global warming on reefs. Still, many reefs demonstrate remarkable regeneration from past stress events. This paper investigates the effects of sea surface temperature (SST) and water column productivity on recovery of coral reefs. In 71 Indo-Pacific sites, coral cover changes over the past 1-3 decades correlated negative-exponentially with mean SST, chlorophyll a, and SST rise. At six monitoring sites (Persian/Arabian Gulf, Red Sea, northern and southern Galápagos, Easter Island, Panama), over half of all corals were reefs in the northwest and central Indian Ocean, as well as the central west Pacific, are at highest risk of degradation, and those at high latitudes the least. The model pinpoints regions where coral reefs presently have the best chances for survival. However, reefs best buffered against temperature and nutrient effects are those that current studies suggest to be most at peril from future ocean acidification.

  15. Coral Reef Biological Criteria

    Science.gov (United States)

    Coral reefs worldwide are experiencing decline from a variety of stressors. Some important stressors are land-based sources of pollution and human activities in the coastal zone. However, few tools are available to offset the impact of these stressors. The Clean Water Act (CWA...

  16. Discovery of a living coral reef in the coastal waters of Iraq.

    Science.gov (United States)

    Pohl, Thomas; Al-Muqdadi, Sameh W; Ali, Malik H; Fawzi, Nadia Al-Mudaffar; Ehrlich, Hermann; Merkel, Broder

    2014-03-06

    Until now, it has been well-established that coral complex in the Arabian/Persian Gulf only exist in the coastal regions of Bahrain, Iran, Kuwait, Oman, Qatar, Saudi Arabia, and United Arab Emirates and it was thought that there are no coral reefs in Iraq. However, here for the first time we show the existence of a living 28 km(2) large coral reef in this country. These corals are adapted to one of the most extreme coral-bearing environments on earth: the seawater temperature in this area ranges between 14 and 34°C. The discovery of the unique coral reef oasis in the turbid coastal waters of Iraq will stimulate the interest of governmental agencies, environmental organizations, as well as of the international scientific community working on the fundamental understanding of coral marine ecosystems and global climate today.

  17. Changing carbonate chemistry in ocean waters surrounding coral reefs in the CMIP5 ensemble

    Science.gov (United States)

    Ricke, K.; Schneider, K.; Cao, L.; Caldeira, K.

    2012-12-01

    Coral reefs comprise some of the most biodiverse ecosystems in the world. Today they are threatened by a number of stressors, including pollution, bleaching from global warming and ocean acidification. In this study, we focus on the implications of ocean acidification for the open ocean chemistry surrounding coral reefs. We use results from 13 Earth System Models included in the Coupled Model Intercomparison Project 5 (CMIP5) to examine the changing aragonite saturations (Ωa) of open ocean waters surrounding approximately 6,000 coral reefs. These 13 Earth System Models participating in CMIP5 each have interactive ocean biogeochemistry models that output state variables including DIC, alkalinity, SST, and salinity. Variation in these values were combined with values from the GLODAP database to calculate aragonite, the form of calcium carbonate that corals use to make their skeletons. We used reef locations from ReefBase that were within one degree (in latitude or longitude) of water masses represented both in the GLODAP database and in the climate models. Carbonate chemistry calculations were performed by Dr. James C. Orr (IPSL) as part of a separate study. We find that in preindustrial times, 99.9 % of coral reefs were located in regions of the ocean with aragonite saturations of 3.5 or more. The saturation threshold for viable reef ecosystems in uncertain, but the pre-industrial distribution of water chemistry surrounding coral reefs may nevertheless provide some indication of viability. We examine the fate of coral reefs in the context of several potential aragonite saturation thresholds, i.e., when Ωa_crit equals 3, 3.25, or 3.5. We show that under a business-as-usual scenario Representative Concentration Pathway (RCP) 8.5, the specific value of Ωa_crit does not affect the long-term fate of coral reefs -- by the end of the 21st century, no coral reef considered is surrounded by water with Ωa> 3. However, under scenarios with significant CO2 emissions

  18. Biology of corals and coral reefs

    Digital Repository Service at National Institute of Oceanography (India)

    Rajkumar, R.; Parulekar, A.H.

    This chapter deals with biology of corals, coral reefs (in general) and coral reefs of the Indian Ocean. Biology of corals is lucidly dealt with, beginning from the clarification on hermatypic and ahermatypic forms. A complete account...

  19. Spatial and tidal variation in food supply to shallow cold-water coral reefs of the Mingulay Reef complex (Outer Hebrides, Scotland)

    NARCIS (Netherlands)

    Duineveld, G.C.A.; Jeffreys, R.M.; Lavaleye, M.S.S.; Davies, A.J.; Bergman, M.J.N.; Watmough, T.; Witbaard, R.

    2012-01-01

    The finding of a previously undescribed cold-water coral reef (Banana Reef) in the Scottish Mingulay reef complex, with denser coverage of living Lophelia pertusa than the principal Mingulay 1 Reef, was the incentive for a comparative study of the food supply to the 2 reefs. Suspended particulate

  20. Spatial and tidal variation in food supply to shallow cold-water coral reefs of the Mingulay Reef complex (Outer Hebrides, Scotland)

    NARCIS (Netherlands)

    Duineveld, G.C.A.; Jeffreys, R.M.; Lavaleye, M.S.S.; Davies, A.J.; Bergman, M.J.N.; Watmough, T.; Witbaard, R.

    2012-01-01

    The finding of a previously undescribed cold-water coral reef (Banana Reef) in the Scottish Mingulay reef complex, with denser coverage of living Lophelia pertusa than the principal Mingulay 1 Reef, was the incentive for a comparative study of the food supply to the 2 reefs. Suspended particulate ma

  1. Water quality and coral bleaching thresholds: formalising the linkage for the inshore reefs of the Great Barrier Reef, Australia.

    Science.gov (United States)

    Wooldridge, Scott A

    2009-05-01

    The threats of wide-scale coral bleaching and reef demise associated with anthropogenic climate change are widely known. Here, the additional role of poor water quality in lowering the thermal tolerance (i.e. bleaching 'resistance') of symbiotic reef corals is considered. In particular, a quantitative linkage is established between terrestrially-sourced dissolved inorganic nitrogen (DIN) loading and the upper thermal bleaching thresholds of inshore reefs on the Great Barrier Reef, Australia. Significantly, this biophysical linkage provides concrete evidence for the oft-expressed belief that improved coral reef management will increase the regional-scale survival prospects of corals reefs to global climate change. Indeed, for inshore reef areas with a high runoff exposure risk, it is shown that the potential benefit of this 'local' management imperative is equivalent to approximately 2.0-2.5 degrees C in relation to the upper thermal bleaching limit; though in this case, a potentially cost-prohibitive reduction in end-of-river DIN of >50-80% would be required. An integrated socio-economic modelling framework is outlined that will assist future efforts to understand (optimise) the alternate tradeoffs that the water quality/coral bleaching linkage presents.

  2. Effectiveness of benthic foraminiferal and coral assemblages as water quality indicators on inshore reefs of the Great Barrier Reef, Australia

    Science.gov (United States)

    Uthicke, S.; Thompson, A.; Schaffelke, B.

    2010-03-01

    Although the debate about coral reef decline focuses on global disturbances (e.g., increasing temperatures and acidification), local stressors (nutrient runoff and overfishing) continue to affect reef health and resilience. The effectiveness of foraminiferal and hard-coral assemblages as indicators of changes in water quality was assessed on 27 inshore reefs along the Great Barrier Reef. Environmental variables (i.e., several water quality and sediment parameters) and the composition of both benthic foraminiferal and hard-coral assemblages differed significantly between four regions (Whitsunday, Burdekin, Fitzroy, and the Wet Tropics). Grain size and organic carbon and nitrogen content of sediments, and a composite water column parameter (based on turbidity and concentrations of particulate matter) explained a significant amount of variation in the data (tested by redundancy analyses) in both assemblages. Heterotrophic species of foraminifera were dominant in sediments with high organic content and in localities with low light availability, whereas symbiont-bearing mixotrophic species were dominant elsewhere. A similar suite of parameters explained 89% of the variation in the FORAM index (a Caribbean coral reef health indicator) and 61% in foraminiferal species richness. Coral richness was not related to environmental setting. Coral assemblages varied in response to environmental variables, but were strongly shaped by acute disturbances (e.g., cyclones, Acanthaster planci outbreaks, and bleaching), thus different coral assemblages may be found at sites with the same environmental conditions. Disturbances also affect foraminiferal assemblages, but they appeared to recover more rapidly than corals. Foraminiferal assemblages are effective bioindicators of turbidity/light regimes and organic enrichment of sediments on coral reefs.

  3. Water quality and herbivory interactively drive coral-reef recovery patterns in American Samoa.

    Directory of Open Access Journals (Sweden)

    Peter Houk

    Full Text Available BACKGROUND: Compared with a wealth of information regarding coral-reef recovery patterns following major disturbances, less insight exists to explain the cause(s of spatial variation in the recovery process. METHODOLOGY/PRINCIPAL FINDINGS: This study quantifies the influence of herbivory and water quality upon coral reef assemblages through space and time in Tutuila, American Samoa, a Pacific high island. Widespread declines in dominant corals (Acropora and Montipora resulted from cyclone Heta at the end of 2003, shortly after the study began. Four sites that initially had similar coral reef assemblages but differential temporal dynamics four years following the disturbance event were classified by standardized measures of 'recovery status', defined by rates of change in ecological measures that are known to be sensitive to localized stressors. Status was best predicted, interactively, by water quality and herbivory. Expanding upon temporal trends, this study examined if similar dependencies existed through space; building multiple regression models to identify linkages between similar status measures and local stressors for 17 localities around Tutuila. The results highlighted consistent, interactive interdependencies for coral reef assemblages residing upon two unique geological reef types. Finally, the predictive regression models produced at the island scale were graphically interpreted with respect to hypothesized site-specific recovery thresholds. CONCLUSIONS/SIGNIFICANCE: Cumulatively, our study purports that moving away from describing relatively well-known patterns behind recovery, and focusing upon understanding causes, improves our foundation to predict future ecological dynamics, and thus improves coral reef management.

  4. Water flow modulates the response of coral reef communities to ocean acidification.

    Science.gov (United States)

    Comeau, S; Edmunds, P J; Lantz, C A; Carpenter, R C

    2014-10-20

    By the end of the century coral reefs likely will be affected negatively by ocean acidification (OA), but both the effects of OA on coral communities and the crossed effects of OA with other physical environmental variables are lacking. One of the least considered physical parameters is water flow, which is surprising considering its strong role in modulating the physiology of reef organisms and communities. In the present study, the effects of flow were tested on coral reef communities maintained in outdoor flumes under ambient pCO2 and high pCO2 (1300 μatm). Net calcification of coral communities, including sediments, was affected by both flow and pCO2 with calcification correlated positively with flow under both pCO2 treatments. The effect of flow was less evident for sediments where dissolution exceeded precipitation of calcium carbonate under all flow speeds at high pCO2. For corals and calcifying algae there was a strong flow effect, particularly at high pCO2 where positive net calcification was maintained at night in the high flow treatment. Our results demonstrate the importance of water flow in modulating the coral reef community response to OA and highlight the need to consider this parameter when assessing the effects of OA on coral reefs.

  5. Coral records of reef-water pH across the central Great Barrier Reef, Australia: assessing the influence of river runoff on inshore reefs

    Directory of Open Access Journals (Sweden)

    J. P. D'Olivo

    2014-07-01

    Full Text Available The boron isotopic (δ11Bcarb compositions of long-lived Porites coral are used to reconstruct reef-water pH across the central Great Barrier Reef (GBR and assess the impact of river runoff on inshore reefs. For the period from 1940 to 2009, corals from both inner as well as mid-shelf sites exhibit the same overall decrease in δ11Bcarb of 0.086 ± 0.033‰ per decade, equivalent to a~decline in seawater pH (pHsw of ~ 0.017 ± 0.007 pH units per decade. This decline is consistent with the long-term effects of ocean acidification based on estimates of CO2 uptake by surface waters due to rising atmospheric levels. We also find that compared to the mid-shelf corals, the δ11Bcarb compositions for inner shelf corals subject to river discharge events, have higher and more variable values and hence higher inferred pHsw values. These higher δ11Bcarb values for inner-shelf corals are particularly evident during wet years, despite river waters having lower pH. The main effect of river discharge on reef-water carbonate chemistry thus appears to be from higher nutrients driving increased phytoplankton productivity, resulting in the drawdown of pCO2 and increase in pHsw. Increased primary production therefore has the potential to counter the more transient effects of low pH river water (pHrw discharged into near-shore environments. Importantly however, inshore reefs also show a consistent pattern of sharply declining coral growth that coincides with periods of high river discharge. This occurs despite these reefs having higher pHsw values and hence higher seawater aragonite saturation states, demonstrating the over-riding importance of local reef-water quality on coral reef health.

  6. Coral records of reef-water pH across the central Great Barrier Reef, Australia: assessing the influence of river runoff on inshore reefs

    Science.gov (United States)

    D'Olivo, J. P.; McCulloch, M. T.; Eggins, S. M.; Trotter, J.

    2015-02-01

    The boron isotopic (δ11Bcarb) compositions of long-lived Porites coral are used to reconstruct reef-water pH across the central Great Barrier Reef (GBR) and assess the impact of river runoff on inshore reefs. For the period from 1940 to 2009, corals from both inner- and mid-shelf sites exhibit the same overall decrease in δ11Bcarb of 0.086 ± 0.033‰ per decade, equivalent to a decline in seawater pH (pHsw) of ~0.017 ± 0.007 pH units per decade. This decline is consistent with the long-term effects of ocean acidification based on estimates of CO2 uptake by surface waters due to rising atmospheric levels. We also find that, compared to the mid-shelf corals, the δ11Bcarb compositions of inner-shelf corals subject to river discharge events have higher and more variable values, and hence higher inferred pHsw values. These higher δ11Bcarb values of inner-shelf corals are particularly evident during wet years, despite river waters having lower pH. The main effect of river discharge on reef-water carbonate chemistry thus appears to be from reduced aragonite saturation state and higher nutrients driving increased phytoplankton productivity, resulting in the drawdown of pCO2 and increase in pHsw. Increased primary production therefore has the potential to counter the more transient effects of low-pH river water (pHrw) discharged into near-shore environments. Importantly, however, inshore reefs also show a consistent pattern of sharply declining coral growth that coincides with periods of high river discharge. This occurs despite these reefs having higher pHsw, demonstrating the overriding importance of local reef-water quality and reduced aragonite saturation state on coral reef health.

  7. Insight into the microbial community structure of a Norwegian deep-water coral reef environment

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    Jensen, Sigmund; Neufeld, Josh D.; Birkeland, Nils-Kåre; Hovland, Martin; Murrell, J. Colin

    2008-11-01

    Deep-water coral reefs support rich biological communities below the photic zone of fjords and continental shelves around the world. In this environment, life is enclosed within cold permanent darkness, in stark contrast to life in tropical coral reefs. We collected samples of water, sediment and a Desmacidon sp. sponge from a deep-water coral reef off the coast of Norway, and characterised bacterial communities with focus on primary producers in the dark. Following DNA extraction, PCR amplification and 16S rRNA gene library sequencing, bioinformatic analyses demonstrated significant differences between bacterial communities associated with the three samples. The finding that 50% of the clones showed cultured bacteria reflects the novel and uncharacterised diversity associated with these deep-water coral reefs. A total of 13 bacterial phyla were identified. Acidobacteria dominated the sponge library and Proteobacteria dominated the bacterioplankton and sediment libraries. Phylogenetic analysis revealed a possible new clade of sponge-associated Acidobacteria, which includes representatives from the Desmacidon sp. (Norway), Rhopaloeides odorabile (Australia) and Discodermia dissoluta (Curacao). Furthermore, the targeted recovery of a particulate methane monooxygenase ( pmoA) gene from the Desmacidon sp. DNA extract suggests that as yet uncultivated type I methanotrophs may mediate methane oxidation in this deep-water coral reef. Methanotrophs were not identified in the 16S rRNA gene libraries, but the presence of a high number (8%) of clones related to sulfide-, nitrite- and iodide-oxidising bacteria suggests chemosynthesis to be involved with maintenance of the deep-water coral reef ecosystem.

  8. Simulation of global ocean acidification and chemical habitats of shallow- and cold-water coral reefs

    Directory of Open Access Journals (Sweden)

    Mei-Di Zheng

    2014-12-01

    Full Text Available Using the UVic Earth System Model, this study simulated the change of seawater chemistry and analyzed the chemical habitat surrounding shallow- and cold-water coral reefs from the year 1800 to 2300 employing RCP2.6, RCP4.5, RCP6.0, and RCP8.5 scenarios. The model results showed that the global ocean will continue to absorb atmospheric CO2. Global mean surface ocean temperature will rise 1.1–2.8 K at the end of the 21st century across RCP scenarios. Meanwhile, the global mean surface ocean pH will drop 0.14–0.42 and the ocean surface mean concentration of carbonate will decrease 20%–51% across the RCP scenarios. The saturated state of sea water with respect to calcite carbonate minerals (Ω will decrease rapidly. During the pre-industrial period, 99% of the shallow-water coral reefs were surrounded by seawater with Ω > 3.5 and 87% of the deep-sea coral reefs were surrounded by seawater with aragonite supersaturation. Within the 21st century, except for the high mitigation scenario of RCP2.6, almost none shallow-water coral reefs will be surrounded by seawater with Ω > 3.5. Under the intensive emission scenario of RCP8.5, by the year 2100, the aragonite saturation horizon will rise to 308 m under the sea surface from 1138 m at the pre-industrial period, thus 73% of the cold-water coral reefs will be surrounded by seawater with aragonite undersaturation. By the year 2300, only 5% of the cold-water coral reefs will be surrounded by seawater with aragonite supersaturation.

  9. Heeding a Call to Action for U.S. Coral Reefs: the Untapped Potential of the Clean Water Act

    Science.gov (United States)

    A recently published call to action by Dodge et al. (2008) identifies nine actions needed to protect coral reefs. The authors identify several management goals that cannot be accomplished with MPAs alone, the traditional approach to coral reef protection. For U.S. waters, the Cle...

  10. CORAL REEF BIOLOGICAL CRITERIA: USING THE CLEAN WATER ACT TO PROTECT A NATIONAL TREASURE

    Science.gov (United States)

    Coral reefs are declining at unprecedented rates worldwide due to multiple interactive stressors including climate change and land-based sources of pollution. The Clean Water Act (CWA) can be a powerful legal instrument for protecting water resources, including the biological inh...

  11. CORAL REEF BIOLOGICAL CRITERIA: USING THE CLEAN WATER ACT TO PROTECT A NATIONAL TREASURE

    Science.gov (United States)

    Coral reefs are declining at unprecedented rates worldwide due to multiple interactive stressors including climate change and land-based sources of pollution. The Clean Water Act (CWA) can be a powerful legal instrument for protecting water resources, including the biological inh...

  12. Global change and modern coral reefs: New opportunities to understand shallow-water carbonate depositional processes

    Science.gov (United States)

    Hallock, Pamela

    2005-04-01

    Human activities are impacting coral reefs physically, biologically, and chemically. Nutrification, sedimentation, chemical pollution, and overfishing are significant local threats that are occurring worldwide. Ozone depletion and global warming are triggering mass coral-bleaching events; corals under temperature stress lose the ability to synthesize protective sunscreens and become more sensitive to sunlight. Photo-oxidative stress also reduces fitness, rendering reef-building organisms more susceptible to emerging diseases. Increasing concentration of atmospheric CO 2 has already reduced CaCO 3 saturation in surface waters by more than 10%. Doubling of atmospheric CO 2 concentration over pre-industrial concentration in the 21st century may reduce carbonate production in tropical shallow marine environments by as much as 80%. As shallow-water reefs decline worldwide, opportunities abound for researchers to expand understanding of carbonate depositional systems. Coordinated studies of carbonate geochemistry with photozoan physiology and calcification, particularly in cool subtropical-transition zones between photozoan-reef and heterotrophic carbonate-ramp communities, will contribute to understanding of carbonate sedimentation under environmental change, both in the future and in the geologic record. Cyanobacteria are becoming increasingly prominent on declining reefs, as these microbes can tolerate strong solar radiation, higher temperatures, and abundant nutrients. The responses of reef-dwelling cyanobacteria to environmental parameters associated with global change are prime topics for further research, with both ecological and geological implications.

  13. Cold-water coral ecosystem (Tisler Reef, Norwegian Shelf) may be a hotspot for carbon cycling

    NARCIS (Netherlands)

    White, M.; Wolff, G.A.; Lundälv, T.; Guihen, D.; Kiriakoulakis, K.; Lavaleye, M.; Duineveld, G.

    2012-01-01

    Cold-water coral (CWC) reefs are recognised as an important marine benthic eco system at continental margins. Where abundant, they most likely play a role both in the maintenance of biodiversity and in the provision of ecosystem services provided by shelf seas. Here, we directly measure the

  14. Aura-biomes are present in the water layer above coral reef benthic macro-organisms

    Directory of Open Access Journals (Sweden)

    Kevin Walsh

    2017-08-01

    Full Text Available As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1 the coral Mussismilia braziliensis, (2 fleshy macroalgae (Stypopodium, Dictota and Canistrocarpus, (3 turf algae, and (4 the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific “aura-biome”. The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria, Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms.

  15. Aura-biomes are present in the water layer above coral reef benthic macro-organisms.

    Science.gov (United States)

    Walsh, Kevin; Haggerty, J Matthew; Doane, Michael P; Hansen, John J; Morris, Megan M; Moreira, Ana Paula B; de Oliveira, Louisi; Leomil, Luciana; Garcia, Gizele D; Thompson, Fabiano; Dinsdale, Elizabeth A

    2017-01-01

    As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1) the coral Mussismilia braziliensis, (2) fleshy macroalgae (Stypopodium, Dictota and Canistrocarpus), (3) turf algae, and (4) the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific "aura-biome". The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria, Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms.

  16. Norwegian deep-water coral reefs: cultivation and molecular analysis of planktonic microbial communities.

    Science.gov (United States)

    Jensen, Sigmund; Lynch, Michael D J; Ray, Jessica L; Neufeld, Josh D; Hovland, Martin

    2015-10-01

    Deep-sea coral reefs do not receive sunlight and depend on plankton. Little is known about the plankton composition at such reefs, even though they constitute habitats for many invertebrates and fish. We investigated plankton communities from three reefs at 260-350 m depth at hydrocarbon fields off the mid-Norwegian coast using a combination of cultivation and small subunit (SSU) rRNA gene and transcript sequencing. Eight months incubations of a reef water sample with minimal medium, supplemented with carbon dioxide and gaseous alkanes at in situ-like conditions, enabled isolation of mostly Alphaproteobacteria (Sulfitobacter, Loktanella), Gammaproteobacteria (Colwellia) and Flavobacteria (Polaribacter). The relative abundance of isolates in the original sample ranged from ∼ 0.01% to 0.80%. Comparisons of bacterial SSU sequences from filtered plankton of reef and non-reef control samples indicated high abundance and metabolic activity of primarily Alphaproteobacteria (SAR11 Ia), Gammaproteobacteria (ARCTIC96BD-19), but also of Deltaproteobacteria (Nitrospina, SAR324). Eukaryote SSU sequences indicated metabolically active microalgae and animals, including codfish, at the reef sites. The plankton community composition varied between reefs and differed between DNA and RNA assessments. Over 5000 operational taxonomic units were detected, some indicators of reef sites (e.g. Flavobacteria, Cercozoa, Demospongiae) and some more active at reef sites (e.g. Gammaproteobacteria, Ciliophora, Copepoda). © 2014 Society for Applied Microbiology and John Wiley & Sons Ltd.

  17. Coral reef ecosystem

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.; Wafar, S.

    communication). Fossil reefs, drowned as a result of the Holocene sea level rise, occur at 92, 85, 75 and 55 m depth along .. ~ !! ":2 0. ~ Figure 3.1 Graphical Representation of the SO-Box Model of a Caribbean Coral Reef Key: 1. Benthic producers. 2. Detritus... explain the low species diversity and the absence of branching corals in the intertidal regions. H.aised fossil reefs, proba bly as a result of local upheavals, arc found in Minicoy island (Gardiner 1903), in Ramanalhapuram district in Tamil Nadu...

  18. Coral reefs in crisis.

    Science.gov (United States)

    Hinrichsen, D

    1997-01-01

    This article reports on the crisis facing reefs throughout the world and the struggle to save them. Coral reefs, one of the biological wonders of the world, are among the largest and oldest living communities of plants and animals on earth, having been evolved between 200 and 450 million years ago. Located mostly in the Pacific region, most established coral reefs are now dead and only the upper layer is covered by a thin changeable skin of living coral. Reefs, over the years, have been the main source of animal protein for over 1 billion people in Asia. Countries near the coastlines, which relied on the seas, have resorted to dynamite fishing, poisoning and other illegal and dangerous techniques. Overpopulation and pollution has caused the deteriorating conditions of the 600,000 sq. km of coral reefs worldwide. Despite these conditions, the government has ignored this problem as they struggle to develop their economies at the expense of common resources. In addition, this article narrates the efforts that are exerted by governments in promoting coral reef protection and management of these coastal resources, setting the Apo Island in the Philippines as an example of good management and sustainability.

  19. Coral reefs: Turning back time

    Science.gov (United States)

    Lough, Janice M.

    2016-03-01

    An in situ experiment finds that reducing the acidity of the seawater surrounding a natural coral reef significantly increases reef calcification, suggesting that ocean acidification may already be slowing coral growth. See Letter p.362

  20. CORAL REEF BIOLOGICAL CRITERIA: USING THE CLEAN ...

    Science.gov (United States)

    Coral reefs are declining at unprecedented rates worldwide due to multiple interactive stressors including climate change and land-based sources of pollution. The Clean Water Act (CWA) can be a powerful legal instrument for protecting water resources, including the biological inhabitants of coral reefs. The objective of the CWA is to restore and maintain the chemical, physical and biological integrity of water resources. Coral reef protection and restoration under the Clean Water Act begins with water quality standards - provisions of state or Federal law that consist of a designated use(s) for the waters of the United States and water quality criteria sufficient to protect the uses. Aquatic life use is the designated use that is measured by biological criteria (biocriteria). Biocriteria are expectations set by a jurisdiction for the quality and quantity of living aquatic resources in a defined waterbody. Biocriteria are an important addition to existing management tools for coral reef ecosystems. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework to aid States and Territories in their development, adoption, and implementation of coral reef biocriteria in their respective water quality standards. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework for coral re

  1. Ecohydrodynamics of cold-water coral reefs: a case study of the Mingulay Reef Complex (western Scotland.

    Directory of Open Access Journals (Sweden)

    Juan Moreno Navas

    Full Text Available Ecohydrodynamics investigates the hydrodynamic constraints on ecosystems across different temporal and spatial scales. Ecohydrodynamics play a pivotal role in the structure and functioning of marine ecosystems, however the lack of integrated complex flow models for deep-water ecosystems beyond the coastal zone prevents further synthesis in these settings. We present a hydrodynamic model for one of Earth's most biologically diverse deep-water ecosystems, cold-water coral reefs. The Mingulay Reef Complex (western Scotland is an inshore seascape of cold-water coral reefs formed by the scleractinian coral Lophelia pertusa. We applied single-image edge detection and composite front maps using satellite remote sensing, to detect oceanographic fronts and peaks of chlorophyll a values that likely affect food supply to corals and other suspension-feeding fauna. We also present a high resolution 3D ocean model to incorporate salient aspects of the regional and local oceanography. Model validation using in situ current speed, direction and sea elevation data confirmed the model's realistic representation of spatial and temporal aspects of circulation at the reef complex including a tidally driven current regime, eddies, and downwelling phenomena. This novel combination of 3D hydrodynamic modelling and remote sensing in deep-water ecosystems improves our understanding of the temporal and spatial scales of ecological processes occurring in marine systems. The modelled information has been integrated into a 3D GIS, providing a user interface for visualization and interrogation of results that allows wider ecological application of the model and that can provide valuable input for marine biodiversity and conservation applications.

  2. Ecohydrodynamics of cold-water coral reefs: a case study of the Mingulay Reef Complex (western Scotland).

    Science.gov (United States)

    Moreno Navas, Juan; Miller, Peter I; Miller, Peter L; Henry, Lea-Anne; Hennige, Sebastian J; Roberts, J Murray

    2014-01-01

    Ecohydrodynamics investigates the hydrodynamic constraints on ecosystems across different temporal and spatial scales. Ecohydrodynamics play a pivotal role in the structure and functioning of marine ecosystems, however the lack of integrated complex flow models for deep-water ecosystems beyond the coastal zone prevents further synthesis in these settings. We present a hydrodynamic model for one of Earth's most biologically diverse deep-water ecosystems, cold-water coral reefs. The Mingulay Reef Complex (western Scotland) is an inshore seascape of cold-water coral reefs formed by the scleractinian coral Lophelia pertusa. We applied single-image edge detection and composite front maps using satellite remote sensing, to detect oceanographic fronts and peaks of chlorophyll a values that likely affect food supply to corals and other suspension-feeding fauna. We also present a high resolution 3D ocean model to incorporate salient aspects of the regional and local oceanography. Model validation using in situ current speed, direction and sea elevation data confirmed the model's realistic representation of spatial and temporal aspects of circulation at the reef complex including a tidally driven current regime, eddies, and downwelling phenomena. This novel combination of 3D hydrodynamic modelling and remote sensing in deep-water ecosystems improves our understanding of the temporal and spatial scales of ecological processes occurring in marine systems. The modelled information has been integrated into a 3D GIS, providing a user interface for visualization and interrogation of results that allows wider ecological application of the model and that can provide valuable input for marine biodiversity and conservation applications.

  3. A continuous, real-time water quality monitoring system for the coral reef ecosystems of Nanwan Bay, Southern Taiwan.

    Science.gov (United States)

    Tew, Kwee Siong; Leu, Ming-Yih; Wang, Jih-Terng; Chang, Chia-Ming; Chen, Chung-Chi; Meng, Pei-Jie

    2014-08-30

    The coral reef ecosystems of Nanwan Bay, Southern Taiwan are undergoing degradation due to anthropogenic impacts, and as such have resulted in a decline in coral cover. As a first step in preventing the continual degradation of these coral reef environments, it is important to understand how changes in water quality affect these ecosystems on a fine-tuned timescale. To this end, a real-time water quality monitoring system was implemented in Nanwan Bay in 2010. We found that natural events, such as cold water intrusion due to upwelling, tended to elicit temporal shifts in coral spawning between 2010 and 2011. In addition, Degree Heating Weeks (DHWs), a commonly utilized predictor of coral bleaching, were 0.92 and 0.59 in summer 2010 and 2011, respectively. Though this quantity of DHW was below the presumed stress-inducing value for these reefs, a rise in DHWs in the future may stress the resident corals.

  4. Monitoring Watershed Water Quality Impacts on Near-Shore Coral Reef Ecosystems in American Samoa using NASA Earth Observations

    Science.gov (United States)

    Teaby, A.; Price, J.; Minovitz, D.; Makely, L.; Torres-Perez, J. L.; Schmidt, C.; Guild, L. S.; Palacios, S. L.

    2014-12-01

    Land use changes can greatly increase erosion and sediment loads reaching watersheds and downstream coastal waters. In coastal environments with steep terrain and small drainage basins, sedimentation directly influences water quality in near-shore marine environments. Poor water quality indicators (i.e., dissolved nutrients and high particulates) affect coral calcification, photosynthesis, and coral cover. The abundance, recruitment, and biodiversity of American Samoa's coral reefs have been heavily affected by population growth, land cover change, pollution, and sediment influx. Monitoring, managing, and protecting these fragile ecosystems remains difficult due to limited resource availability, steep terrain, and local land ownership. Despite extensive field hours, traditional field and lab-based water quality research produces temporally and spatially limited datasets. Using a 'ridge to reef' effort, this project built a management tool to assess coral reef vulnerability using land use, hydrology, water quality, and coral reef cover in American Samoa to provide local agencies and partners with spatial representation of water quality parameters and site-specific implications for coral reef vulnerability. This project used land cover classified from Landsat 7 and 8 images, precipitation data from NOAA, and physical ocean factors from Terra MODIS. Changes in land cover from 2000 to 2014 were also estimated using Landsat imagery. Final products were distributed to partners to enhance water quality management, community outreach, and coral reef conservation.

  5. Bioindicators of changes in water quality on coral reefs: review and recommendations for monitoring programmes

    Science.gov (United States)

    Cooper, T. F.; Gilmour, J. P.; Fabricius, K. E.

    2009-09-01

    Effective environmental management requires monitoring programmes that provide specific links between changes in environmental conditions and ecosystem health. This article reviews the suitability of a range of bioindicators for use in monitoring programmes that link changes in water quality to changes in the condition of coral-reef ecosystems. From the literature, 21 candidate bioindicators were identified, whose responses to changes in water quality varied spatially and temporally; responses ranged from rapid (hours) changes within individual corals to long-term (years) changes in community composition. From this list, the most suitable bioindicators were identified by determining whether responses were (i) specific, (ii) monotonic, (iii) variable, (iv) practical and (v) ecologically relevant to management goals. For long-term monitoring programmes that aim to quantify the effects of chronic changes in water quality, 11 bioindicators were selected: symbiont photophysiology, colony brightness, tissue thickness and surface rugosity of massive corals, skeletal elemental and isotopic composition, abundance of macro-bioeroders, micro- and meiobenthic organisms such as foraminifera, coral recruitment, macroalgal cover, taxonomic richness of corals and the maximal depth of coral-reef development. For short-term monitoring programmes, or environmental impact assessments that aim to quantify the effects of acute changes in water quality, a subset of seven of these bioindicators were selected, including partial mortality. Their choice will depend on the specific objectives and the timeframe available for each monitoring programme. An assessment framework is presented to assist in the selection of bioindicators to quantify the effects of changing water quality on coral-reef ecosystems.

  6. Water quality as a regional driver of coral biodiversity and macroalgae on the Great Barrier Reef.

    Science.gov (United States)

    De'ath, Glenn; Fabricius, Katharina

    2010-04-01

    Degradation of inshore coral reefs due to poor water quality is a major issue, yet it has proved difficult to demonstrate this linkage at other than local scales. This study modeled the relationships between large-scale data on water clarity and chlorophyll and four measures of reef status along the whole Great Barrier Reef, Australia (GBR; 12-24 degrees S). Four biotic groups with different trophic requirements, namely, the cover of macroalgae and the taxonomic richness of hard corals and phototrophic and heterotrophic octocorals, were predicted from water quality and spatial location. Water clarity and chlorophyll showed strong spatial patterns, with water clarity increasing more than threefold from inshore to offshore waters and chlorophyll decreasing approximately twofold from inshore to offshore and approximately twofold from south to north. Richness of hard corals and phototrophic octocorals declined with increasing turbidity and chlorophyll, whereas macroalgae and the richness of heterotrophic octocorals increased. Macroalgal cover experienced the largest water quality effects, increasing fivefold with decreasing water clarity and 1.4-fold with increasing chlorophyll. For each of the four biota, -45% of variation was predictable, with water quality effects accounting for 18-46% of that variation and spatial effects accounting for the remainder. Effects were consistent with the trophic requirements of the biota, suggesting that both macroalgal cover and coral biodiversity are partially controlled by energy supply limitation. Throughout the GBR, mean annual values of >10 m Secchi disk depth (a measure of water clarity) and coral richness, indicating these values to be potentially useful water quality guidelines. The models predict that on the 22.8% of GBR reefs where guideline values are currently exceeded, water quality improvement, e.g., by minimizing agricultural runoff, should reduce macroalgal cover on average by 39% and increase the richness of hard

  7. Habitat, Fauna, and Conservation of Florida's Deep-Water Coral Reefs

    Science.gov (United States)

    Reed, J. K.; Pomponi, S. A.; Messing, C. G.; Brooke, S.

    2008-05-01

    ,000 individual deep-water lithoherms may occur on the Blake Plateau and Straits of Florida, perhaps exceeding the areal extent of all the shallow-water reefs of the southeastern U.S. Our research program has provided data on the status of knowledge concerning these deep-reef habitats to the South Atlantic Fishery Management Council (SAFMC). Currently pending is a proposal by the SAFMC for a deep- water coral Habitat Area of Particular Concern (HAPC) that would extend from North Carolina to south Florida (78,888 km2) to protect these diverse and irreplaceable resources from destructive fishing activities such as bottom trawling. Deep-water reefs worldwide have been severely impacted by bottom trawling, including the deep-water Oculina coral reefs off central eastern Florida, which are structurally similar to the Lophelia reefs. Over a 30-year period, up to 99% of unprotected portions of the Oculina reefs were destroyed by rock shrimp trawling, whereas reefs designated as the Oculina HAPC in 1984 were protected from trawling and long-lines and are still relatively healthy. Numerous fisheries may target the deep-water Lophelia reef habitat including royal red shrimp, golden crab, and various fin fish.

  8. Seascape context and predators override water quality effects on inshore coral reef fish communities

    Science.gov (United States)

    Gilby, Ben L.; Tibbetts, Ian R.; Olds, Andrew D.; Maxwell, Paul S.; Stevens, Tim

    2016-09-01

    Understanding the relative influence of factors that influence faunal community structure, such as habitat and landscape arrangement, has been a long-standing goal of ecologists. This is complicated in marine environments by the high importance of physico-chemical water factors in determining species distributions relative to their physiological or behavioural limits. In this study, we rank the relative importance of 17 seascape, habitat and physico-chemical water factors for structuring the composition of fish communities on the inshore coral reefs of Moreton Bay, eastern Australia. Fish were surveyed at 12 reef sites along the ambient estuarine water gradient in the bay during summer and winter using a baited underwater video approach. Multivariate random forest analyses showed that reef fish community composition correlated most strongly with the local abundance of piscivorous fish and the seascape context of individual reefs (especially distance to nearest seagrass and mangroves), while water quality factors ranked much lower in importance. However, fish communities from sites nearer to rivers were more spatiotemporally variable than those from sites nearer to oceanic waters, indicating that water quality can drive variations in community structure along short-term temporal scales. In turn, piscivore abundance was greatest on reefs near large areas of seagrass, and with low sand cover, high coral cover and high water clarity. Our findings demonstrate that a reef's location within the broader seascape can be more important for fish communities than factors relating to the reef habitat itself and exposure to reduced water quality. To improve the spatial conservation of marine ecosystems, we encourage a more intimate understanding of how these factors contribute to structuring the use of habitats across seascapes by mobile species.

  9. Developing a multi-stressor gradient for coral reefs

    Science.gov (United States)

    Coral reefs are often found near coastal waters where multiple anthropogenic stressors co-occur at areas of human disturbance. Developing coral reef biocriteria under the U.S. Clean Water Act requires relationships between anthropogenic stressors and coral reef condition to be es...

  10. Developing a multi-stressor gradient for coral reefs

    Science.gov (United States)

    Coral reefs are often found near coastal waters where multiple anthropogenic stressors co-occur at areas of human disturbance. Developing coral reef biocriteria under the U.S. Clean Water Act requires relationships between anthropogenic stressors and coral reef condition to be es...

  11. Water flow and fin shape polymorphism in coral reef fishes.

    Science.gov (United States)

    Binning, Sandra A; Roche, Dominique G

    2015-03-01

    Water flow gradients have been linked to phenotypic differences and swimming performance across a variety of fish assemblages. However, the extent to which water motion shapes patterns of phenotypic divergence within species remains unknown. We tested the generality of the functional relationship between swimming morphology and water flow by exploring the extent of fin and body shape polymorphism in 12 widespread species from three families (Acanthuridae, Labridae, Pomacentridae) of pectoral-fin swimming (labriform) fishes living across localized wave exposure gradients. The pectoral fin shape of Labridae and Acanthuridae species was strongly related to wave exposure: individuals with more tapered, higher aspect ratio (AR) fins were found on windward reef crests, whereas individuals with rounder, lower AR fins were found on leeward, sheltered reefs. Three of seven Pomacentridae species showed similar trends, and pectoral fin shape was also strongly related to wave exposure in pomacentrids when fin aspect ratios of three species were compared across flow habitats at very small spatial scales (back lagoon). Unlike fin shape, there were no intraspecific differences in fish body fineless ratio across habitats or depths. Contrary to our predictions, there was no pattern relating species' abundances to polymorphism across habitats (i.e., abundance was not higher at sites where morphology is better adapted to the environment). This suggests that there are behavioral and/or physiological mechanisms enabling some species to persist across flow habitats in the absence of morphological differences. We suggest that functional relationships between swimming morphology and water flow not only structure species assemblages, but are yet another important variable contributing to phenotypic differences within species. The close links between fin shape polymorphism and local water flow conditions appear to be important for understanding species' distributions as well as patterns of

  12. Sessile Organisms on PVC Panels in the Waters around a Coral Reef of Ishigaki Island, Yaeyama Islands, Japan, Immediately after the Catastrophic Coral Bleaching in 1998

    OpenAIRE

    Nandakumar, Kanavillil; Takada, Yoshitake; Shibuno, Takuro

    1999-01-01

    Sessile organisms on PVC panels suspended inside and outside coral reef at Ishigaki Island, Yaeyama Islands, Japan, was monitored for 20 days just after the wide-spread incident of coral bleaching in September, 1998. The settlement of a total of 16 species of algae and invertebrates was recorded. Generally, Enteromorpha sp. (Chlorophyceae) dominated the panels. The percentage area cover, number of species, biomass and algal growth were significantly greater in waters outside the reef.

  13. Sessile Organisms on PVC Panels in the Waters around a Coral Reef of Ishigaki Island, Yaeyama Islands, Japan, Immediately after the Catastrophic Coral Bleaching in 1998

    OpenAIRE

    Nandakumar, Kanavillil; Takada, Yoshitake; Shibuno, Takuro

    1999-01-01

    Sessile organisms on PVC panels suspended inside and outside coral reef at Ishigaki Island, Yaeyama Islands, Japan, was monitored for 20 days just after the wide-spread incident of coral bleaching in September, 1998. The settlement of a total of 16 species of algae and invertebrates was recorded. Generally, Enteromorpha sp. (Chlorophyceae) dominated the panels. The percentage area cover, number of species, biomass and algal growth were significantly greater in waters outside the reef.

  14. Coral reefs at risk

    Science.gov (United States)

    Showstack, Randy

    Eighty-eight percent of Southeast Asia's reefs are threatened by overfishing, destructive fishing, and sedimentation and pollution from inland activities, according to a new report by 35 regional scientists published by the World Resources Institute.Nearly 100,000 square kilometers of coral reefs—34% of the world's total—are located in Southeast Asia.

  15. Coral community responses to declining water quality: Whitsunday Islands, Great Barrier Reef, Australia

    Science.gov (United States)

    Thompson, Angus; Schroeder, Thomas; Brando, Vittorio E.; Schaffelke, Britta

    2014-12-01

    A five-year period (2002-2006) of below-median rainfall followed by a six-year period (2007-2012) of above-median rainfall and seasonal flooding allowed a natural experiment into the effects of runoff on the water quality and subsequent coral community responses in the Whitsunday Islands, Great Barrier Reef (Australia). Satellite-derived water quality estimates of total suspended solids (TSS) and chlorophyll- a (Chl) concentration showed marked seasonal variability that was exaggerated during years with high river discharge. During above-median rainfall years, Chl was aseasonally high for a period of 3 months during the wet season (February-April), while TSS was elevated for four months, extending into the dry season (March-June). Coinciding with these extremes in water quality was a reduction in the abundance and shift in the community composition, of juvenile corals. The incidence of coral disease was at a maximum during the transition from years of below-median to years of above-median river discharge. In contrast to juvenile corals, the cover of larger corals remained stable, although the composition of communities varied along environmental gradients. In combination, these results suggest opportunistic recruitment of corals during periods of relatively low environmental stress with selection for more tolerant species occurring during periods of environmental extremes.

  16. Effects of reduced water quality on coral reefs in and out of no-take marine reserves.

    Science.gov (United States)

    Wenger, Amelia S; Williamson, David H; da Silva, Eduardo T; Ceccarelli, Daniela M; Browne, Nicola K; Petus, Caroline; Devlin, Michelle J

    2016-02-01

    Near-shore marine environments are increasingly subjected to reduced water quality, and their ability to withstand it is critical to their persistence. The potential role marine reserves may play in mitigating the effects of reduced water quality has received little attention. We investigated the spatial and temporal variability in live coral and macro-algal cover and water quality during moderate and major flooding events of the Fitzroy River within the Keppel Bay region of the Great Barrier Reef Marine Park from 2007 to 2013. We used 7 years of remote sensing data on water quality and data from long-term monitoring of coral reefs to quantify exposure of coral reefs to flood plumes. We used a distance linear model to partition the contribution of abiotic and biotic factors, including zoning, as drivers of the observed changes in coral and macro-algae cover. Moderate flood plumes from 2007 to 2009 did not affect coral cover on reefs in the Keppel Islands, suggesting the reef has intrinsic resistance against short-term exposure to reduced water quality. However, from 2009 to 2013, live coral cover declined by ∼ 50% following several weeks of exposure to turbid, low salinity water from major flood plume events in 2011 and subsequent moderate events in 2012 and 2013. Although the flooding events in 2012 and 2013 were smaller than the flooding events between 2007 to 2009, the ability of the reefs to withstand these moderate floods was lost, as evidenced by a ∼ 20% decline in coral cover between 2011 to 2013. Although zoning (no-take reserve or fished) was identified a significant driver of coral cover, we recorded consistently lower coral cover on reserve reefs than on fished reefs throughout the study period and significantly lower cover in 2011. Our findings suggest that even reefs with an inherent resistance to reduced water quality are not able to withstand repeated disturbance events. The limitations of reserves in mitigating the effects of reduced water

  17. Climate Change in the Seychelles: Implications for Water and Coral Reefs

    Energy Technology Data Exchange (ETDEWEB)

    Payet, Rolph; Agricole, Wills [National Meteorological Services Mahe (Seychelles). Div. of Policy, Planning and Services

    2006-06-15

    The Seychelles is a small island state in the western Indian Ocean that is vulnerable to the effects of climate change. This vulnerability led the Intergovernmental Panel on Climate Change (IPCC) in 2001 to express concern over the potential economic and social consequences that may be faced by small island states. Small island states should be prepared to adapt to such changes, especially in view of their dependence on natural resources, such as water and coral reefs, to meet basic human welfare needs. Analysis of long-term data for precipitation, air temperature, and sea-surface temperature indicated that changes are already observable in the Seychelles. The increase in dry spells that resulted in drought conditions in 1999 and the 1998 mass coral bleaching are indicative of the events that are likely to occur under future climate change. Pre-IPCC Third Assessment Report scenarios and the new SRES scenarios are compared for changes in precipitation and air surface temperature for the Seychelles. These intercomparisons indicate that the IS92 scenarios project a much warmer and wetter climate for the Seychelles than do the SRES scenarios. However, a wetter climate does not imply readily available water, but rather longer dry spells with more intense precipitation events. These observations will likely place enormous pressures on water-resources management in the Seychelles. Similarly, sea-surface temperature increases predicted by the HADCm{sup 3} model will likely trigger repeated coral-bleaching episodes, with possible coral extinctions within the Seychelles region by 2040. The cover of many coral reefs around the Seychelles have already changed, and the protection of coral-resilient areas is a critical adaptive option.

  18. Diverse coral communities in naturally acidified waters of a Western Pacific reef

    Science.gov (United States)

    Shamberger, Kathryn E. F.; Cohen, Anne L.; Golbuu, Yimnang; McCorkle, Daniel C.; Lentz, Steven J.; Barkley, Hannah C.

    2014-01-01

    Anthropogenic carbon dioxide emissions are acidifying the oceans, reducing the concentration of carbonate ions ([CO32-]) that calcifying organisms need to build and cement coral reefs. To date, studies of a handful of naturally acidified reef systems reveal depauperate communities, sometimes with reduced coral cover and calcification rates, consistent with results of laboratory-based studies. Here we report the existence of highly diverse, coral-dominated reef communities under chronically low pH and aragonite saturation state (Ωar). Biological and hydrographic processes change the chemistry of the seawater moving across the barrier reefs and into Palau's Rock Island bays, where levels of acidification approach those projected for the western tropical Pacific open ocean by 2100. Nevertheless, coral diversity, cover, and calcification rates are maintained across this natural acidification gradient. Identifying the combination of biological and environmental factors that enable these communities to persist could provide important insights into the future of coral reefs under anthropogenic acidification.

  19. EPA Field Manual for Coral Reef Assessments

    Science.gov (United States)

    The Water Quality Research Program (WQRP) supports development of coral reef biological criteria. Research is focused on developing methods and tools to support implementation of legally defensible biological standards for maintaining biological integrity, which is protected by ...

  20. EPA Field Manual for Coral Reef Assessments

    Science.gov (United States)

    The Water Quality Research Program (WQRP) supports development of coral reef biological criteria. Research is focused on developing methods and tools to support implementation of legally defensible biological standards for maintaining biological integrity, which is protected by ...

  1. Global warming and coral reefs

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.

    photosynthesis and survival of coral planulae, etc. Unfortunately, no such studies have been carried out on Indian corals so far, and a visualization of what will happen to Indian reefs if sea level rises rapidly will have to be constructed based on such dat... susceptible, as plankton living near the sea surface, and as hosts deriving nutri tional benefits from zooxanthtllar photosynthesis, which itself is susceptible to UV-B damage. Contrary to the misconception that UV is absorbed by the sea water, UV penetrates...

  2. Mingulay reef complex: An interdisciplinary study of cold-water coral habitat, hydrography and biodiversity

    NARCIS (Netherlands)

    Roberts, J.M.; Davies, A.J.; Henry, L.A.; Dodds, L.A.; Duineveld, G.C.A.; Lavaleye, M.S.S.; Maier, C.; van Soest, R.W.M.; Bergman, M.J.N.; Hühnerbach, V.; Huvenne, V.A.I.; Sinclair, D.J.; Watmough, T.; Long, D.; Green, S.L.; van Haren, H.

    2009-01-01

    The Mingulay reef complex in the Sea of the Hebrides west of Scotland was first mapped in 2003 with a further survey in 2006 revealing previously unknown live coral reef areas at 120 to 190 m depth. Habitat mapping confirmed that distinctive mounded bathymetry was formed by reefs of Lophelia pertusa

  3. Coral reefs in the Anthropocene

    Science.gov (United States)

    Hughes, Terry P.; Barnes, Michele L.; Bellwood, David R.; Cinner, Joshua E.; Cumming, Graeme S.; Jackson, Jeremy B. C.; Kleypas, Joanie; van de Leemput, Ingrid A.; Lough, Janice M.; Morrison, Tiffany H.; Palumbi, Stephen R.; van Nes, Egbert H.; Scheffer, Marten

    2017-06-01

    Coral reefs support immense biodiversity and provide important ecosystem services to many millions of people. Yet reefs are degrading rapidly in response to numerous anthropogenic drivers. In the coming centuries, reefs will run the gauntlet of climate change, and rising temperatures will transform them into new configurations, unlike anything observed previously by humans. Returning reefs to past configurations is no longer an option. Instead, the global challenge is to steer reefs through the Anthropocene era in a way that maintains their biological functions. Successful navigation of this transition will require radical changes in the science, management and governance of coral reefs.

  4. Coral reef resilience through biodiversity

    Science.gov (United States)

    Rogers, Caroline S.

    2013-01-01

    Irrefutable evidence of coral reef degradation worldwide and increasing pressure from rising seawater temperatures and ocean acidification associated with climate change have led to a focus on reef resilience and a call to “manage” coral reefs for resilience. Ideally, global action to reduce emission of carbon dioxide and other greenhouse gases will be accompanied by local action. Effective management requires reduction of local stressors, identification of the characteristics of resilient reefs, and design of marine protected area networks that include potentially resilient reefs. Future research is needed on how stressors interact, on how climate change will affect corals, fish, and other reef organisms as well as overall biodiversity, and on basic ecological processes such as connectivity. Not all reef species and reefs will respond similarly to local and global stressors. Because reef-building corals and other organisms have some potential to adapt to environmental changes, coral reefs will likely persist in spite of the unprecedented combination of stressors currently affecting them. The biodiversity of coral reefs is the basis for their remarkable beauty and for the benefits they provide to society. The extraordinary complexity of these ecosystems makes it both more difficult to predict their future and more likely they will have a future.

  5. Digital reef rugosity estimates coral reef habitat complexity.

    Science.gov (United States)

    Dustan, Phillip; Doherty, Orla; Pardede, Shinta

    2013-01-01

    Ecological habitats with greater structural complexity contain more species due to increased niche diversity. This is especially apparent on coral reefs where individual coral colonies aggregate to give a reef its morphology, species zonation, and three dimensionality. Structural complexity is classically measured with a reef rugosity index, which is the ratio of a straight line transect to the distance a flexible chain of equal length travels when draped over the reef substrate; yet, other techniques from visual categories to remote sensing have been used to characterize structural complexity at scales from microhabitats to reefscapes. Reef-scale methods either lack quantitative precision or are too time consuming to be routinely practical, while remotely sensed indices are mismatched to the finer scale morphology of coral colonies and reef habitats. In this communication a new digital technique, Digital Reef Rugosity (DRR) is described which utilizes a self-contained water level gauge enabling a diver to quickly and accurately characterize rugosity with non-invasive millimeter scale measurements of coral reef surface height at decimeter intervals along meter scale transects. The precise measurements require very little post-processing and are easily imported into a spreadsheet for statistical analyses and modeling. To assess its applicability we investigated the relationship between DRR and fish community structure at four coral reef sites on Menjangan Island off the northwest corner of Bali, Indonesia and one on mainland Bali to the west of Menjangan Island; our findings show a positive relationship between DRR and fish diversity. Since structural complexity drives key ecological processes on coral reefs, we consider that DRR may become a useful quantitative community-level descriptor to characterize reef complexity.

  6. Decadal changes in turbid-water coral communities at Pandora Reef: loss of resilience or too soon to tell?

    Science.gov (United States)

    Done, Terry; Turak, Emre; Wakeford, Mary; Devantier, Lyndon; McDonald, Abbi; Fisk, David

    2007-12-01

    Coral communities were monitored at Pandora Reef, nearshore Great Barrier Reef from 1981 to 2005 using photography and videography. In the 1980s, regional elevation of land-based nutrients in coastal waters (ca. 2-6 times pre-European levels of early 1800s) did not prevent overall recovery of coral cover and diversity following a sequence of environmental disturbances in the 1970s. However, prospects for a repeat of such resilience following catastrophic mortality from high-temperature bleaching in 1998 and a cyclone in 2000 are not clear. Different coral communities around the reef varied greatly in relation to impacts and recovery. Fore-reef communities dominated by acroporids (fast growing branching and tabular Acropora and foliose Montipora) recovered strongly in the 1980s following apparently severe impacts by cyclone, flood and heat wave disturbances in the 1970s, attaining 60-90% cover by stabilizing rubble and outgrowing macro-algae in reef, by contrast, poritid-dominated communities (massive and finger Porites and columnar Goniopora and Alveopora) had more stable trajectories and smaller impact from recent disturbances: recovery was well underway in 2005. The contrasting trajectories of different parts of the reef reflect differential survival of more persistent versus more ephemeral taxa, notably poritids and acroporids, respectively, both major contributors to framework and cover on reefs globally. A repeat of earlier resilience appears possible in the shallow fore-reef, but unlikely in the deeper fore-reef, which had few viable fragments or recruits in 2005. The main limits on recovery may be (1) reduced supply of coral larvae due to widespread regional losses of coral brood stock and (2) the reduced intervals between disturbances associated with global climate change. The presence of a high abundance of Acroporidae is a major pre-disposing risk factor for climate change impacts.

  7. Connectivity of microbial populations in coral reef environments: microbiomes of sediment, fish and water

    Science.gov (United States)

    Biddle, J.; Leon, Z. R.; McCargar, M.; Drew, J.

    2016-12-01

    The benthic environments of coral reefs are heavily shaped by physiochemical factors, but also the ecological interactions of the animals and plants in the reef ecosystem. Microbial populations may be shared between the ecosystem of sediments, seagrasses and reef fish, however it is unknown to what degree. We investigated the potential connections between the microbiomes of sediments, seagrass blades and roots (Syringodium isoetifolium), Surgeonfish (A. nigricauda, Acanthurinae sp. unknown, C. striatus) and Parrotfish (C. spinidens) guts in reef areas of Fiji. We contrasted these with sediment samples from the Florida Keys and ocean water microbiomes from the Atlantic, Pacific and Indian Oceans. In general, we see a higher diversity of sediment microbial communities in Fiji compared to the Florida Keys. However, many of the same taxa are shared in these chemically similar environments, whereas the ocean water environments are completely distinct with few overlapping groups. We were able to show connectivity of a core microbiome between seagrass, fish and sediments in Fiji, including identifying a potential environmental reservoir of a surgeonfish symbiont, Epulopiscum. Finally, we show that fish guts have different microbial populations from crop to hindgut, and that microbial populations differ based on food source. The connection of these ecosystems suggest that the total microbiome of these environments may vary as their animal inhabitants shift in a changing ocean.

  8. Bioindication in coral reef ecosystems.

    Science.gov (United States)

    Yap, H T

    1986-01-01

    The concept of bioindication in the sense of the use of organisms for detecting environmental stress has been employed in coral reef conservation and management for the past several years. Important tools are coral growth rates and various community parameters, notably hard coral cover. The present need is the optimal coordination of international efforts for the earliest possible institution of an effective monitoring system.

  9. Coral reef health response to chronic and acute changes in water quality in St. Thomas, United States Virgin Islands.

    Science.gov (United States)

    Ennis, Rosmin S; Brandt, Marilyn E; Wilson Grimes, Kristin R; Smith, Tyler B

    2016-10-15

    It is suspected that land cover alteration on the southern coast of St. Thomas, USVI has increased runoff, degrading nearshore water quality and coral reef health. Chronic and acute changes in water quality, sediment deposition, and coral health metrics were assessed in three zones based upon perceived degree of human influence. Chlorophyll (pCoral bleaching in all zones peaked in November with a regional thermal stress event (pbleaching prevalence was significantly greater in the most impacted zone compared to the offshore zone (p=0.0396), suggesting a link between declining water quality and bleaching severity. Published by Elsevier Ltd.

  10. Black reefs: iron-induced phase shifts on coral reefs.

    Science.gov (United States)

    Kelly, Linda Wegley; Barott, Katie L; Dinsdale, Elizabeth; Friedlander, Alan M; Nosrat, Bahador; Obura, David; Sala, Enric; Sandin, Stuart A; Smith, Jennifer E; Vermeij, Mark J A; Williams, Gareth J; Willner, Dana; Rohwer, Forest

    2012-03-01

    The Line Islands are calcium carbonate coral reef platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The reefs surrounding the shipwreck debris are characterized by high benthic cover of turf algae, macroalgae, cyanobacterial mats and corallimorphs, as well as particulate-laden, cloudy water. These sites also have very low coral and crustose coralline algal cover and are call black reefs because of the dark-colored benthic community and reduced clarity of the overlying water column. Here we use a combination of benthic surveys, chemistry, metagenomics and microcosms to investigate if and how shipwrecks initiate and maintain black reefs. Comparative surveys show that the live coral cover was reduced from 40 to 60% to reefs on Millennium, Tabuaeran and Kingman. These three sites are relatively large (>0.75 km(2)). The phase shift occurs rapidly; the Kingman black reef formed within 3 years of the ship grounding. Iron concentrations in algae tissue from the Millennium black reef site were six times higher than in algae collected from reference sites. Metagenomic sequencing of the Millennium Atoll black reef-associated microbial community was enriched in iron-associated virulence genes and known pathogens. Microcosm experiments showed that corals were killed by black reef rubble through microbial activity. Together these results demonstrate that shipwrecks and their associated iron pose significant threats to coral reefs in iron-limited regions.

  11. Coral Reef Biological Criteria: Using Clean Water Act to Protect a National Treasure

    Science.gov (United States)

    A collaborative Environmental Protection Agency effort is underway to elucidate the technical aspects of coral reef biocriteria implementation. A stony coral rapid bioassessment protocol has been introduced and applied in the Florida Keys and U.S. Virgin Islands, where several in...

  12. Coral Reef Biological Criteria: Using Clean Water Act to Protect a National Treasure

    Science.gov (United States)

    A collaborative Environmental Protection Agency effort is underway to elucidate the technical aspects of coral reef biocriteria implementation. A stony coral rapid bioassessment protocol has been introduced and applied in the Florida Keys and U.S. Virgin Islands, where several in...

  13. Spatial and temporal variability of water quality in the coral reefs of Tayrona National Natural Park, Colombian Caribbean.

    Science.gov (United States)

    Bayraktarov, Elisa; Pizarro, Valeria; Wild, Christian

    2014-06-01

    Tayrona National Natural Park (TNNP) is a hotspot of coral reef biodiversity in the Colombian Caribbean, located between the city of Santa Marta (>455,000 inhabitants) and several smaller river mouths (Rio Piedras, Mendihuaca, Guachaca). The region also experiences a strong seasonal variation in physical parameters (temperature, salinity, wind, and water currents) due to alternating dry seasons with coastal upwelling and rainy seasons. However, the spatial and temporal effects on water quality parameters relevant for coral reef functioning have not been investigated. Therefore, inorganic nutrient, chlorophyll a, and particulate organic carbon (POC) concentrations along with biological O2 demand (BOD), pH, and water clarity directly above local coral reefs (~10 m water depth) were monitored for 25 months in four bays along a distance gradient (12-20 km) to Santa Marta in the southwest and to the first river mouth (17-27 km) in the east. This is by far the most comprehensive coral reefs water quality dataset for the region. Findings revealed that particularly during non-upwelling, chlorophyll a and POC concentrations along with BOD significantly increased with decreasing distance to the rivers in the east, suggesting that the observed spatial water quality decline was triggered by riverine runoff and not by the countercurrent-located Santa Marta. Nitrate, nitrite, and chlorophyll a concentrations significantly increased during upwelling, while pH and water clarity decreased. Generally, water quality in TNNP was close to oligotrophic conditions adequate for coral reef growth during non-upwelling, but exceeded critical threshold values during upwelling and in relation to riverine discharge.

  14. The sum is more than its parts: Key species in the functioning of cold-water coral reef communities

    NARCIS (Netherlands)

    Mueller, C.E.

    2014-01-01

    Cold-water coral reefs are hotspots of biodiversity and biogeochemistry in the deep-sea, solely fuelled by external energy sources. Hence, food input, processing and recycling play a major role in the functioning of these ecosystems. In this thesis we aimed to study energy flow and metabolism of col

  15. 40 CFR 230.44 - Coral reefs.

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 24 2010-07-01 2010-07-01 false Coral reefs. 230.44 Section 230.44... Aquatic Sites § 230.44 Coral reefs. (a) Coral reefs consist of the skeletal deposit, usually of calcareous... organisms present in growing portions of the reef. (b) Possible loss of values: The discharge of dredged or...

  16. An observational heat budget analysis of a coral reef, Heron Reef, Great Barrier Reef, Australia

    Science.gov (United States)

    MacKellar, Mellissa C.; McGowan, Hamish A.; Phinn, Stuart R.

    2013-03-01

    Measurements of the surface energy balance, the structure and evolution of the convective atmospheric reef layer (CARL), and local meteorology and hydrodynamics were made during June 2009 and February 2010 at Heron Reef, Australia, to establish the relative partitioning of heating within the water and atmosphere. Horizontal advection was shown to moderate temperature in the CARL and the water, having a cooling influence on the atmosphere, and providing an additional source or sink of energy to the water overlying the reef, depending on tide. The key driver of atmospheric heating was surface sensible heat flux, while heating of the reef water was primarily due to solar radiation, and thermal conduction and convection from the reef substrate. Heating and cooling processes were more defined during winter due to higher sensible and latent heat fluxes and strong diurnal evolution of the CARL. Sudden increases in water temperature were associated with inundation of warmer oceanic water during the flood tide, particularly in winter due to enhanced nocturnal cooling of water overlying the reef. Similarly, cooling of the water over the reef occurred during the ebb tide as heat was transported off the reef to the surrounding ocean. While these results are the first to shed light on the heat budget of a coral reef and overlying CARL, longer-term, systematic measurements of reef thermal budgets are needed under a range of meteorological and hydrodynamic conditions, and across various reef types to elucidate the influence on larger-scale oceanic and atmospheric processes. This is essential for understanding the role of coral reefs in tropical and sub-tropical meteorology; the physical processes that take place during coral bleaching events, and coral and algal community dynamics on coral reefs.

  17. Fluctuations in coral health of four common inshore reef corals in response to seasonal and anthropogenic changes in water quality.

    Science.gov (United States)

    Browne, Nicola K; Tay, Jason K L; Low, Jeffrey; Larson, Ole; Todd, Peter A

    2015-04-01

    Environmental drivers of coral condition (maximum quantum yield, symbiont density, chlorophyll a content and coral skeletal growth rates) were assessed in the equatorial inshore coastal waters of Singapore, where the amplitude of seasonal variation is low, but anthropogenic influence is relatively high. Water quality variables (sediments, nutrients, trace metals, temperature, light) explained between 52 and 83% of the variation in coral condition, with sediments and light availability as key drivers of foliose corals (Merulina ampliata, Pachyseris speciosa), and temperature exerting a greater influence on a branching coral (Pocillopora damicornis). Seasonal reductions in water quality led to high chlorophyll a concentrations and maximum quantum yields in corals, but low growth rates. These marginal coral communities are potentially vulnerable to climate change, hence, we propose water quality thresholds for coral growth with the aim of mitigating both local and global environmental impacts. Copyright © 2015 Elsevier Ltd. All rights reserved.

  18. Confronting the coral reef crisis

    Science.gov (United States)

    Bellwood, D. R.; Hughes, T. P.; Folke, C.; Nyström, M.

    2004-06-01

    The worldwide decline of coral reefs calls for an urgent reassessment of current management practices. Confronting large-scale crises requires a major scaling-up of management efforts based on an improved understanding of the ecological processes that underlie reef resilience. Managing for improved resilience, incorporating the role of human activity in shaping ecosystems, provides a basis for coping with uncertainty, future changes and ecological surprises. Here we review the ecological roles of critical functional groups (for both corals and reef fishes) that are fundamental to understanding resilience and avoiding phase shifts from coral dominance to less desirable, degraded ecosystems. We identify striking biogeographic differences in the species richness and composition of functional groups, which highlight the vulnerability of Caribbean reef ecosystems. These findings have profound implications for restoration of degraded reefs, management of fisheries, and the focus on marine protected areas and biodiversity hotspots as priorities for conservation.

  19. Ballast water as a vector of coral pathogens in the Gulf of Mexico: the case of the Cayo Arcas coral reef.

    Science.gov (United States)

    Aguirre-Macedo, M Leopoldina; Vidal-Martinez, Victor M; Herrera-Silveira, Jorge A; Valdés-Lozano, David S; Herrera-Rodríguez, Miguel; Olvera-Novoa, Miguel A

    2008-09-01

    The discharge of nutrients, phytoplankton and pathogenic bacteria through ballast water may threaten the Cayo Arcas reef system. To assess this threat, the quality of ballast water and presence of coral reef pathogenic bacteria in 30 oil tankers loaded at the PEMEX Cayo Arcas crude oil terminal were determined. The water transported in the ships originated from coastal, oceanic or riverine regions. Statistical associations among quality parameters and bacteria were tested using redundancy analysis (RDA). In contrast with coastal or oceanic water, the riverine water had high concentrations of coliforms, including Vibrio cholerae 01 and, Serratia marcescens and Sphingomona spp., which are frequently associated with "white pox" and "white plague type II" coral diseases. There were also high nutrient concentrations and low water quality index values (WQI and TRIX). The presence of V. cholerae 01 highlights the need for testing ballast water coming from endemic regions into Mexican ports.

  20. Ecological Processes and Contemporary Coral Reef Management

    Directory of Open Access Journals (Sweden)

    Angela Dikou

    2010-05-01

    Full Text Available Top-down controls of complex foodwebs maintain the balance among the critical groups of corals, algae, and herbivores, thus allowing the persistence of corals reefs as three-dimensional, biogenic structures with high biodiversity, heterogeneity, resistance, resilience and connectivity, and the delivery of essential goods and services to societies. On contemporary reefs world-wide, however, top-down controls have been weakened due to reduction in herbivory levels (overfishing or disease outbreak while bottom-up controls have increased due to water quality degradation (increase in sediment and nutrient load and climate forcing (seawater warming and acidification leading to algal-dominated alternate benthic states of coral reefs, which are indicative of a trajectory towards ecological extinction. Management to reverse common trajectories of degradation for coral reefs necessitates a shift from optimization in marine resource use and conservation towards building socio-economic resilience into coral reef systems while attending to the most manageable human impacts (fishing and water quality and the global-scale causes (climate change.

  1. Variability of Symbiodinium Communities in Waters, Sediments, and Corals of Thermally Distinct Reef Pools in American Samoa

    Science.gov (United States)

    Cunning, Ross; Yost, Denise M.; Guarinello, Marisa L.; Putnam, Hollie M.; Gates, Ruth D.

    2015-01-01

    Reef-building corals host assemblages of symbiotic algae (Symbiodinium spp.) whose diversity and abundance may fluctuate under different conditions, potentially facilitating acclimatization to environmental change. The composition of free-living Symbiodinium in reef waters and sediments may also be environmentally labile and may influence symbiotic assemblages by mediating supply and dispersal. The magnitude and spatial scales of environmental influence over Symbiodinium composition in different reef habitat compartments are, however, not well understood. We used pyrosequencing to compare Symbiodinium in sediments, water, and ten coral species between two backreef pools in American Samoa with contrasting thermal environments. We found distinct compartmental assemblages of clades A, C, D, F, and/or G Symbiodinium types, with strong differences between pools in water, sediments, and two coral species. In the pool with higher and more variable temperatures, abundance of various clade A and C types differed compared to the other pool, while abundance of D types was lower in sediments but higher in water and in Pavona venosa, revealing an altered habitat distribution and potential linkages among compartments. The lack of between-pool effects in other coral species was due to either low overall variability (in the case of Porites) or high within-pool variability. Symbiodinium communities in water and sediment also showed within-pool structure, indicating that environmental influences may operate over multiple, small spatial scales. This work suggests that Symbiodinium composition is highly labile in reef waters, sediments, and some corals, but the underlying drivers and functional consequences of this plasticity require further testing with high spatial resolution biological and environmental sampling. PMID:26713847

  2. Coral Reef Ecosystems Monitoring Feature Service

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Coral Reef Ecosystem Monitoring feature service hosted on ArcGIS Online provides access to data collected in the Mariana Archipelago by the Coral Reef Ecosystem...

  3. Fisheries management: what chance on coral reefs?

    OpenAIRE

    1996-01-01

    Failures of fishery management to control fishing effort globally and how this affects the coral reef fisheries are discussed. The use of marine reserves in coral reef fisheries management is also emphasized.

  4. Severe 2010 Cold-Water Event Caused Unprecedented Mortality to Corals of the Florida Reef Tract and Reversed Previous Survivorship Patterns

    Science.gov (United States)

    Lirman, Diego; Schopmeyer, Stephanie; Manzello, Derek; Gramer, Lewis J.; Precht, William F.; Muller-Karger, Frank; Banks, Kenneth; Barnes, Brian; Bartels, Erich; Bourque, Amanda; Byrne, James; Donahue, Scott; Duquesnel, Janice; Fisher, Louis; Gilliam, David; Hendee, James; Johnson, Meaghan; Maxwell, Kerry; McDevitt, Erin; Monty, Jamie; Rueda, Digna; Ruzicka, Rob; Thanner, Sara

    2011-01-01

    Background Coral reefs are facing increasing pressure from natural and anthropogenic stressors that have already caused significant worldwide declines. In January 2010, coral reefs of Florida, United States, were impacted by an extreme cold-water anomaly that exposed corals to temperatures well below their reported thresholds (16°C), causing rapid coral mortality unprecedented in spatial extent and severity. Methodology/Principal Findings Reef surveys were conducted from Martin County to the Lower Florida Keys within weeks of the anomaly. The impacts recorded were catastrophic and exceeded those of any previous disturbances in the region. Coral mortality patterns were directly correlated to in-situ and satellite-derived cold-temperature metrics. These impacts rival, in spatial extent and intensity, the impacts of the well-publicized warm-water bleaching events around the globe. The mean percent coral mortality recorded for all species and subregions was 11.5% in the 2010 winter, compared to 0.5% recorded in the previous five summers, including years like 2005 where warm-water bleaching was prevalent. Highest mean mortality (15%–39%) was documented for inshore habitats where temperatures were coral species, and were 1–2 orders of magnitude higher for most species. Conclusions/Significance The cold-water anomaly of January 2010 caused the worst coral mortality on record for the Florida Reef Tract, highlighting the potential catastrophic impacts that unusual but extreme climatic events can have on the persistence of coral reefs. Moreover, habitats and species most severely affected were those found in high-coral cover, inshore, shallow reef habitats previously considered the “oases” of the region, having escaped declining patterns observed for more offshore habitats. Thus, the 2010 cold-water anomaly not only caused widespread coral mortality but also reversed prior resistance and resilience patterns that will take decades to recover. PMID:21853066

  5. Using novel acoustic and visual mapping tools to predict the small-scale spatial distribution of live biogenic reef framework in cold-water coral habitats

    Science.gov (United States)

    De Clippele, L. H.; Gafeira, J.; Robert, K.; Hennige, S.; Lavaleye, M. S.; Duineveld, G. C. A.; Huvenne, V. A. I.; Roberts, J. M.

    2017-03-01

    Cold-water corals form substantial biogenic habitats on continental shelves and in deep-sea areas with topographic highs, such as banks and seamounts. In the Atlantic, many reef and mound complexes are engineered by Lophelia pertusa, the dominant framework-forming coral. In this study, a variety of mapping approaches were used at a range of scales to map the distribution of both cold-water coral habitats and individual coral colonies at the Mingulay Reef Complex (west Scotland). The new ArcGIS-based British Geological Survey (BGS) seabed mapping toolbox semi-automatically delineated over 500 Lophelia reef `mini-mounds' from bathymetry data with 2-m resolution. The morphometric and acoustic characteristics of the mini-mounds were also automatically quantified and captured using this toolbox. Coral presence data were derived from high-definition remotely operated vehicle (ROV) records and high-resolution microbathymetry collected by a ROV-mounted multibeam echosounder. With a resolution of 0.35 × 0.35 m, the microbathymetry covers 0.6 km2 in the centre of the study area and allowed identification of individual live coral colonies in acoustic data for the first time. Maximum water depth, maximum rugosity, mean rugosity, bathymetric positioning index and maximum current speed were identified as the environmental variables that contributed most to the prediction of live coral presence. These variables were used to create a predictive map of the likelihood of presence of live cold-water coral colonies in the area of the Mingulay Reef Complex covered by the 2-m resolution data set. Predictive maps of live corals across the reef will be especially valuable for future long-term monitoring surveys, including those needed to understand the impacts of global climate change. This is the first study using the newly developed BGS seabed mapping toolbox and an ROV-based microbathymetric grid to explore the environmental variables that control coral growth on cold-water coral

  6. Relationships between host phylogeny, host type and bacterial community diversity in cold-water coral reef sponges.

    Directory of Open Access Journals (Sweden)

    Sandra Schöttner

    Full Text Available Cold-water coral reefs are known to locally enhance the diversity of deep-sea fauna as well as of microbes. Sponges are among the most diverse faunal groups in these ecosystems, and many of them host large abundances of microbes in their tissues. In this study, twelve sponge species from three cold-water coral reefs off Norway were investigated for the relationship between sponge phylogenetic classification (species and family level, as well as sponge type (high versus low microbial abundance, and the diversity of sponge-associated bacterial communities, taking also geographic location and water depth into account. Community analysis by Automated Ribosomal Intergenic Spacer Analysis (ARISA showed that as many as 345 (79% of the 437 different bacterial operational taxonomic units (OTUs detected in the dataset were shared between sponges and sediments, while only 70 (16% appeared purely sponge-associated. Furthermore, changes in bacterial community structure were significantly related to sponge species (63% of explained community variation, sponge family (52% or sponge type (30%, whereas mesoscale geographic distances and water depth showed comparatively small effects (<5% each. In addition, a highly significant, positive relationship between bacterial community dissimilarity and sponge phylogenetic distance was observed within the ancient family of the Geodiidae. Overall, the high diversity of sponges in cold-water coral reefs, combined with the observed sponge-related variation in bacterial community structure, support the idea that sponges represent heterogeneous, yet structured microbial habitats that contribute significantly to enhancing bacterial diversity in deep-sea ecosystems.

  7. Contrasting responses of coral reef fauna and foraminiferal assemblages to human influence in La Parguera, Puerto Rico

    Science.gov (United States)

    Coral reef biota including stony corals, sponges, gorgonians, fish, benthic macroinvertebrates and foraminifera were surveyed in coastal waters near La Parguera, in southwestern Puerto Rico. The goal was to evaluate sensitivity of coral reef biological indicators to human distur...

  8. Contrasting responses of coral reef fauna and foraminiferal assemblages to human influence in La Parguera, Puerto Rico

    Science.gov (United States)

    Coral reef biota including stony corals, sponges, gorgonians, fish, benthic macroinvertebrates and foraminifera were surveyed in coastal waters near La Parguera, in southwestern Puerto Rico. The goal was to evaluate sensitivity of coral reef biological indicators to human distur...

  9. Carbon mineralization and carbonate preservation in modern cold-water coral reef sediments on the Norwegian shelf

    Directory of Open Access Journals (Sweden)

    L. M. Wehrmann

    2009-04-01

    Full Text Available Cold-water coral ecosystems are considered hot-spots of biodiversity and biomass production and may be a regionally important contributor to carbonate production. The impact of these ecosystems on biogeochemical processes and carbonate preservation in associated sediments were studied at Røst Reef and Traenadjupet Reef, two modern (post-glacial cold-water coral reefs on the Mid-Norwegian shelf. Sulfate and iron reduction as well as carbonate dissolution and precipitation were investigated by combining pore-water geochemical profiles, steady state modeling, as well as solid phase analyses and sulfate reduction rate measurements on gravity cores of up to 3.25 m length. Low extents of sulfate depletion and dissolved inorganic carbon (DIC production, combined with sulfate reduction rates not exceeding 3 nmol S cm−3 d−1, suggested that overall anaerobic carbon mineralization in the sediments was low. These data showed that the coral fragment-bearing siliciclastic sediments were effectively decoupled from the productive pelagic ecosystem by the complex reef surface framework. Organic matter being mineralized by sulfate reduction was calculated to consist of 57% carbon bound in CH2O groups and 43% carbon in -CH2- groups. Methane concentrations were below 1 μM, and failed to support the hypothesis of a linkage between the distribution of cold-water coral reefs and the presence of hydrocarbon seepage. Reductive iron oxide dissolution linked to microbial sulfate reduction buffered the pore-water carbonate system and inhibited acid-driven coral skeleton dissolution. A large pool of reactive iron was available leading to the formation of iron sulfide minerals. Constant pore-water Ca2+, Mg2+ and Sr2+ concentrations in most cores and decreasing Ca2+ and Sr2+ concentrations with depth in core 23–18 GC indicated diagenetic carbonate precipitation. This was

  10. Carbon mineralization and carbonate preservation in modern cold-water coral reef sediments on the Norwegian shelf

    Directory of Open Access Journals (Sweden)

    L. M. Wehrmann

    2008-12-01

    Full Text Available Cold-water coral ecosystems are considered hot-spots of biodiversity and biomass production and may be a regionally important contributor to carbonate production. The impact of these ecosystems on biogeochemical processes and carbonate preservation in associated sediments were studied at Røst Reef and Traenadjupet Reef, two modern (post-glacial cold-water coral reefs on the Mid-Norwegian shelf. Sulfate and iron reduction as well as carbonate dissolution and precipitation were investigated by combining pore-water geochemical profiles, steady state modeling, as well as solid phase analyses and sulfate reduction rate measurements on gravity cores of up to 3.2 m length. Low extents of sulfate depletion and dissolved inorganic carbon (DIC production, combined with sulfate reduction rates not exceeding 3 nmolS cm−3 d−1, suggested that overall anaerobic carbon mineralization in the sediments was low. These data showed that the coral fragment-bearing siliciclastic sediments were effectively decoupled from the productive pelagic ecosystem by the complex reef surface framework. Organic matter being mineralized by sulfate reduction was calculated to consist of 57% carbon bound in –CH2O– groups and 43% carbon in –CH2– groups. Methane concentrations were below 1 μM, and failed to support the hypothesis of a linkage between the distribution of cold-water coral reefs and the presence of hydrocarbon seepage. Iron reduction linked to microbial sulfate reduction buffered the pore-water carbonate system and inhibited acid driven coral skeleton dissolution. A large pool of reactive iron was available leading to the formation of iron sulfide minerals. Constant pore-water Ca2+, Mg2+ and Sr2+ concentrations in most cores and decreasing Ca2+ and Sr2+ concentrations with depth in core 23-18 GC indicated diagenetic carbonate precipitation. This was consistent

  11. 76 FR 66273 - Snapper-Grouper Fishery Off the Southern Atlantic States and Coral and Coral Reefs Fishery in the...

    Science.gov (United States)

    2011-10-26

    ... Atlantic States and Coral and Coral Reefs Fishery in the South Atlantic; Exempted Fishing Permit AGENCY... conditions, various species of reef fish and live rock in Federal waters off North Carolina. The specimens... Plan (FMP) for the Snapper-Grouper Fishery of the South Atlantic Region and the FMP for Coral, Coral...

  12. Using novel acoustic and visual mapping tools to predict the small-scale spatial distribution of live biogenic reef framework in cold-water coral habitats

    NARCIS (Netherlands)

    De Clippele, L. H.; Gafeira, J.; Robert, K.; Hennige, S.; Lavaleye, M.S.; Duineveld, G.C.A.; Huvenne, V.A.I.; Roberts, J.M.

    2017-01-01

    Cold-water corals form substantial biogenic habitats on continental shelves and in deep-sea areas with topographic highs, such as banks and seamounts. In the Atlantic, many reef and mound complexes are engineered by Lophelia pertusa, the dominant framework-forming coral. In this study, a variety of

  13. In situ growth experiments of reef-building cold-water corals: The good, the bad and the ugly

    Science.gov (United States)

    Lartaud, F.; Meistertzheim, A. L.; Peru, E.; Le Bris, N.

    2017-03-01

    The ecological study of corals in their habitat is essential to determine the effects of global change and to develop strategies for reef conservation. Based on mark and recovery experiments, we investigated skeletal growth patterns of two reef-building cold-water coral species, Lophelia pertusa and Madrepora oculata, in the Lacaze-Duthiers canyon in the northwestern Mediterranean Sea. Coral fragments were collected, stained and deployed for short-term (2.5 months) and long-term (15 months) growth experiments at two sites located 4.5 km and 6.8 km from the canyon head. The analysis of distinct growth parameters (budding, new polyp growth and linear extension of the coral fragments) revealed that growth patterns are consistent among branches of different sizes, but discrepancies arose from the different types of staining used. Calcein appeared more suitable than alizarin red, which strongly limited growth by delaying coral recovery, for short-term experiments at least. Both species grew rapidly when redeployed in their habitat. Effects of long-term experiments could not be observed because corals were exposed to harmful environmental stress, particularly the lethal effect of sedimentation on the fragments. Despite limited in situ deployment, the growth analysis from the short-term experiment highlighted species-specific responses according to the location along a longitudinal gradient in the canyon and were likely related to the local environmental conditions. Consistent with the observed species distributions, M. oculata showed optimal growth at the site closer to the canyon head compared with L. pertusa, which had optimal growth at the deeper site. In situ experiments are difficult to conduct in deep-sea ecosystems, but with the use of remotely operated vehicles (ROVs), such a simple approach may be of interest to managers of cold-water coral ecosystems.

  14. Wave transformation across coral reefs under changing sea levels

    Science.gov (United States)

    Harris, Daniel; Power, Hannah; Vila-Conejo, Ana; Webster, Jody

    2015-04-01

    The transformation of swell waves from deep water across reef flats is the primary process regulating energy regimes in coral reef systems. Coral reefs are effective barriers removing up to 99% of wave energy during breaking and propagation across reef flats. Consequently back-reef environments are often considered low energy with only limited sediment transport and geomorphic change during modal conditions. Coral reefs, and specifically reef flats, therefore provide important protection to tropical coastlines from coastal erosion and recession. However, changes in sea level could lead to significant changes in the dissipation of swell wave energy in coral reef systems with wave heights dependent on the depth over the reef flat. This suggests that a rise in sea level would also lead to significantly higher energy conditions exacerbating the transgressive effects of sea level rise on tropical beaches and reef islands. This study examines the potential implications of different sea level scenarios on the transformation of waves across the windward reef flats of One Tree Reef, southern Great Barrier Reef. Waves were measured on the reef flats and back-reef sand apron of One Tree Reef. A one-dimensional wave model was calibrated and used to investigate wave processes on the reef flats under different mean sea level (MSL) scenarios (present MSL, +1 m MSL, and +2 m MSL). These scenarios represent both potential future sea level states and also the paleo sea level of the late Holocene in the southern Great Barrier Reef. Wave heights were shown to increase under sea level rise, with greater wave induced orbital velocities affecting the bed under higher sea levels. In general waves were more likely to entrain and transport sediment both on the reef flat and in the back reef environment under higher sea levels which has implications for not only forecasted climate change scenarios but also for interpreting geological changes during the late Holocene when sea levels were 1

  15. Current status, crisis and conservation of coral reef ecosystems in China

    OpenAIRE

    ShaoHong Wu; WenJun Zhang

    2012-01-01

    Harboring rich marine species and playing important ecological functions, coral reef ecosystems have attracted widespread concern around the world. Ecosystem diversity, conservation and management of coral reefs are becoming a hot research area. Coral reefs in China are mainly distributed in the South China Sea and Hainan, Taiwan, Hong Kong, Guangdong, and Guangxi coastal waters. In recent years, due to the global climate change and the growing impact of human activities, coral reef biodivers...

  16. New tool to manage coral reefs

    Science.gov (United States)

    Showstack, Randy

    The National Oceanic and Atmospheric Administration is making available a new tool for coral reef managers to monitor the cumulative thermal stress of several coral reefs around the world, including the Great Barrier Reef, and reefs by the Galapagos Islands, the agency announced on 25 February.The agency's "Degree Heating Weeks" product uses satellite-derived information to allow continuous monitoring of the extent and acuteness of thermal stress, which are key predictors of coral bleaching, and which contribute to coral reef degradation.

  17. 75 FR 48934 - Coral Reef Conservation Program Implementation Guidelines

    Science.gov (United States)

    2010-08-12

    ... National Oceanic and Atmospheric Administration RIN 0648-ZC19 Coral Reef Conservation Program... Implementation Guidelines for the Coral Reef Conservation Program. SUMMARY: This document provides NOAA's revised Grant Program Implementation Guidelines (Guidelines) for the Coral Reef Conservation Program (CRCP or...

  18. Devising a Coral Reef Ocean Acidification Monitoring Portfolio

    Science.gov (United States)

    Gledhill, D. K.; Jewett, L.

    2012-12-01

    Coral reef monitoring has frequently been based only on descriptive science with limited capacity to assign specific attribution to agents of change. There is a requirement to engineer a diagnostic monitoring approach that can test predictions regarding the response of coral reef ecosystems to ocean acidification, and to identify potential areas of refugia or areas of particular concern. The approach should provide the means to detect not only changes in water chemistry but also changes in coral reef community structure and function which can be anticipated based upon our current understanding of paleo-OA events, experimental findings, process investigations, and modeling projections In August, 2012 a Coral Reef Ocean Acidification Monitoring Portfolio Workshop was hosted by the NOAA Ocean Acidification Program and the National Coral Reef Institute at the Nova Southeastern University Oceanographic Center. The workshop convened researchers and project managers from around the world engaged in coral reef ecosystems ocean acidification monitoring and research. The workshop sought to define a suite of metrics to include as part of long-term coral reef monitoring efforts that can contribute to discerning specific attribution of changes in coral reef ecosystems in response to ocean acidification. This portfolio of observations should leverage existing and proposed monitoring initiatives and would be derived from a suite of chemical, biogeochemical and ecological measurements. This talk will report out on the key findings from the workshop which should include identifying the most valuable that should be integrated into long-term coral reef ecosystem monitoring that will aid in discerning changes in coral reef ecosystems in response to ocean acidification. The outcomes should provide: recommendations of the most efficient and robust ways to monitor these metrics; identified augmentations that would be required to current ocean acidification monitoring necessary to achieve

  19. Influence of ambient water intrusion on coral reef acidification in the Chuuk lagoon, located in the coral-rich western Pacific Ocean

    Science.gov (United States)

    Ko, Young Ho; Lee, Kitack; Noh, Jae Hoon; Lee, Charity M.; Kleypas, Joan A.; Jeong, Hae Jin; Kim, Kwang Young

    2016-04-01

    Weekly carbonate chemistry condition data recorded between 2008 and 2014 in the Chuuk lagoon (7.3°N and 151.5°E) of the Federated States of Micronesia, located in the western Pacific Ocean, were analyzed. The results showed that, during periods of weak intrusion of ambient seawater from the surrounding open ocean, two internal biological processes (calcification and respiration) reinforced each other and together lowered the pH of the reef water for extended periods, ranging from a few to several months. The analysis indicated that reduced intrusion of ambient water is associated with periods of low wind speeds. Such conditions increase the residence time of reef water, thus promoting acidification by respiration and calcification. This phenomenon likely affects many other areas of the coral-rich western Pacific Ocean, which contains 50% of global coral reefs and in which the degree of ambient water intrusion into the atolls has been shown to be closely associated with the El Niño-Southern Oscillation-induced wind speed change.

  20. Coral Reef Ecosystems under Climate Change and Ocean Acidification

    OpenAIRE

    Ove Hoegh-Guldberg; Poloczanska, Elvira S.; William Skirving; Sophie Dove

    2017-01-01

    Coral reefs are found in a wide range of environments, where they provide food and habitat to a large range of organisms as well as providing many other ecological goods and services. Warm-water coral reefs, for example, occupy shallow sunlit, warm, and alkaline waters in order to grow and calcify at the high rates necessary to build and maintain their calcium carbonate structures. At deeper locations (40–150 m), “mesophotic” (low light) coral reefs accumulate calcium carbonate at much lower ...

  1. Coral Reef Watch, Hotspots, 50 km

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA Coral Reef Watch provides Coral Bleaching hotspot maps derived from NOAA's Polar Operational Environmental Satellites (POES). This data provides global area...

  2. Cyanobacteria in Coral Reef Ecosystems: A Review

    Directory of Open Access Journals (Sweden)

    L. Charpy

    2012-01-01

    Full Text Available Cyanobacteria have dominated marine environments and have been reef builders on Earth for more than three million years (myr. Cyanobacteria still play an essential role in modern coral reef ecosystems by forming a major component of epiphytic, epilithic, and endolithic communities as well as of microbial mats. Cyanobacteria are grazed by reef organisms and also provide nitrogen to the coral reef ecosystems through nitrogen fixation. Recently, new unicellular cyanobacteria that express nitrogenase were found in the open ocean and in coral reef lagoons. Furthermore, cyanobacteria are important in calcification and decalcification. All limestone surfaces have a layer of boring algae in which cyanobacteria often play a dominant role. Cyanobacterial symbioses are abundant in coral reefs; the most common hosts are sponges and ascidians. Cyanobacteria use tactics beyond space occupation to inhibit coral recruitment. Cyanobacteria can also form pathogenic microbial consortia in association with other microbes on living coral tissues, causing coral tissue lysis and death, and considerable declines in coral reefs. In deep lagoons, coccoid cyanobacteria are abundant and are grazed by ciliates, heteroflagellates, and the benthic coral reef community. Cyanobacteria produce metabolites that act as attractants for some species and deterrents for some grazers of the reef communities.

  3. Cyanobacteria in coral reef ecosystems : a review

    OpenAIRE

    Charpy, L.; Casareto, B.E.; Langlade, M. J.; Suzuki, Y.

    2012-01-01

    Cyanobacteria have dominated marine environments and have been reef builders on Earth for more than three million years (myr). Cyanobacteria still play an essential role in modern coral reef ecosystems by forming a major component of epiphytic, epilithic, and endolithic communities as well as of microbial mats. Cyanobacteria are grazed by reef organisms and also provide nitrogen to the coral reef ecosystems through nitrogen fixation. Recently, new unicellular cyanobacteria that express nitrog...

  4. Coral reef diseases in the Atlantic-Caribbean

    Science.gov (United States)

    Rogers, Caroline S.; Weil, Ernesto; Dubinsky, Zvy; Stambler, Noga

    2010-01-01

    Coral reefs are the jewels of the tropical oceans. They boast the highest diversity of all marine ecosystems, aid in the development and protection of other important, productive coastal marine communities, and have provided millions of people with food, building materials, protection from storms, recreation and social stability over thousands of years, and more recently, income, active pharmacological compounds and other benefits. These communities have been deteriorating rapidly in recent times. The continuous emergence of coral reef diseases and increase in bleaching events caused in part by high water temperatures among other factors underscore the need for intensive assessments of their ecological status and causes and their impact on coral reefs.

  5. Coral Reef Ecosystems under Climate Change and Ocean Acidification

    Directory of Open Access Journals (Sweden)

    Ove Hoegh-Guldberg

    2017-05-01

    Full Text Available Coral reefs are found in a wide range of environments, where they provide food and habitat to a large range of organisms as well as providing many other ecological goods and services. Warm-water coral reefs, for example, occupy shallow sunlit, warm, and alkaline waters in order to grow and calcify at the high rates necessary to build and maintain their calcium carbonate structures. At deeper locations (40–150 m, “mesophotic” (low light coral reefs accumulate calcium carbonate at much lower rates (if at all in some cases yet remain important as habitat for a wide range of organisms, including those important for fisheries. Finally, even deeper, down to 2,000 m or more, the so-called “cold-water” coral reefs are found in the dark depths. Despite their importance, coral reefs are facing significant challenges from human activities including pollution, over-harvesting, physical destruction, and climate change. In the latter case, even lower greenhouse gas emission scenarios (such as Representative Concentration Pathway RCP 4.5 are likely drive the elimination of most warm-water coral reefs by 2040–2050. Cold-water corals are also threatened by warming temperatures and ocean acidification although evidence of the direct effect of climate change is less clear. Evidence that coral reefs can adapt at rates which are sufficient for them to keep up with rapid ocean warming and acidification is minimal, especially given that corals are long-lived and hence have slow rates of evolution. Conclusions that coral reefs will migrate to higher latitudes as they warm are equally unfounded, with the observations of tropical species appearing at high latitudes “necessary but not sufficient” evidence that entire coral reef ecosystems are shifting. On the contrary, coral reefs are likely to degrade rapidly over the next 20 years, presenting fundamental challenges for the 500 million people who derive food, income, coastal protection, and a range of

  6. 77 FR 25407 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Coral and Coral Reefs Off the...

    Science.gov (United States)

    2012-04-30

    ..., and South Atlantic; Coral and Coral Reefs Off the Southern Atlantic States; Exempted Fishing Permit... conditions, various species of reef fish, crabs, and lobsters in Federal waters off South Carolina and North... zones, or artificial reefs without additional authorization. Additionally, NMFS prohibits the possession...

  7. Evaluation of Stony Coral Indicators for Coral Reef ...

    Science.gov (United States)

    Colonies of reef-building stony corals at 57 stations around St. Croix, U.S. Virgin Islands were characterized by species, size and percentage of living tissue. Taxonomic, biological and physical indicators of coral condition were derived from these measurements and assessed for their response to gradients of human disturbance. The purpose of the study was to identify indicators that could be used for regulatory assessments under authority of the Clean Water Act--this requires that indicators distinguish anthropogenic disturbances from natural variation. Stony coral indicators were tested for correlation with human disturbance across gradients located on three different sides of the island. At the most intensely disturbed location, five of eight primary indicators were highly correlated with distance from the source of disturbance: Coral taxa richness, average colony size, the coefficient of variation of colony size (an indicator of colony size heterogeneity), total topographic coral surface area, and live coral surface area. An additional set of exploratory indicators related to rarity, reproductive and spawning mode, and taxonomic identity were also screened for association with disturbance at the same location. For the other two locations, there were no significant changes in indicator values and therefore no discernible effects of human activity. Coral indicators demonstrated sufficient precision to detect levels of change that would be applicable in a regio

  8. Environmental constraints on Holocene cold-water coral reef growth off Norway: Insights from a multiproxy approach

    Science.gov (United States)

    Raddatz, Jacek; Liebetrau, Volker; Trotter, Julie; Rüggeberg, Andres; Flögel, Sascha; Dullo, Wolf-Christian; Eisenhauer, Anton; Voigt, Silke; McCulloch, Malcolm

    2016-10-01

    High-latitude cold-water coral (CWC) reefs are particularly susceptible due to enhanced CO2 uptake in these regions. Using precisely dated (U/Th) CWCs (Lophelia pertusa) retrieved during research cruise POS 391 (Lopphavet 70.6°N, Oslofjord 59°N) we applied boron isotopes (δ11B), Ba/Ca, Li/Mg, and U/Ca ratios to reconstruct the environmental boundary conditions of CWC reef growth. The sedimentary record from these CWC reefs reveals a lack of corals between 6.4 and 4.8 ka. The question remains if this phenomenon is related to changes in the carbonate system or other causes. The initial postglacial setting had elevated Ba/Ca ratios, indicative of meltwater fluxes showing a decreasing trend toward cessation at 6.4 ka with an oscillation pattern similar to continental glacier fluctuations. Downcore U/Ca ratios reveal an increasing trend, which is outside the range of modern U/Ca variability in L. pertusa, suggesting changes of seawater pH near 6.4 ka. The reconstructed bottom water temperature at Lopphavet reveals a striking similarity to Barent sea surface and subsea surface temperature records. We infer that meltwater pulses weakened the North Atlantic Current system, resulting in southward advances of cold and CO2-rich Arctic waters. A corresponding shift in the δ11B record from 25.0‰ to 27.0‰ probably implies enhanced pH up-regulation of the CWCs due to the higher pCO2 concentrations of ambient seawater, which hastened mid-Holocene CWC reef decline on the Norwegian margin.

  9. Evaluating the performance of Lyzenga's water column correction in case-1 coral reef water using a simulated Wolrdview-2 imagery

    Science.gov (United States)

    Dwi Mandini Manessa, Masita; Haidar, Muhammad; Budhiman, Syarif; Winarso, Gatot; Kanno, Ariyo; Sagawa, Tatsuyuki; Sekine, Masahiko

    2016-11-01

    This study identified the performance of Lyzenga water column correction under controlled condition of noise, water quality, and bottom type diversity. We build a simulated multispectral imagery, represent the subsurface reflectance of coral reef environment that receives by Worldview-2 satellite. The evaluation was performed to two different subsurface reflectance: Lee et al.’s and Maritonia et al.’s radiative transfer model. As a result, in the case of simple Maritonia et al.’s reflectance model, it shows that the effect of the water column is removable. However, if the actual just above surface reflectance is as more complex as Lee et al.’s model, then the Lyzenga's water column method could reduce the effect of water attenuation but not removed. In fact, based on the mathematical presentation of Lyzenga's model on simulation reflectance formula the effect of depth and water attenuation are in multiplication function. Thus, even after the correction, the water column attenuation effect stillremain.

  10. A Review ofRecent Research on Cold-Water Coral Reefs%冷水珊瑚礁研究进展与评述

    Institute of Scientific and Technical Information of China (English)

    赵美霞; 余克服

    2016-01-01

    相比浅海暖水珊瑚礁,对深海的冷水珊瑚礁研究相对薄弱。近年来随着水下机器人和深潜器技术的进步,国际上兴起了深海珊瑚礁研究热潮。文章综述了:1)冷水石珊瑚的物种多样性及格局分布特征;2)冷水石珊瑚的生长特征及测量方法;3)冷水珊瑚礁的类型、形成机制与演化过程;4)海洋酸化对冷水珊瑚礁的影响;5)冷水石珊瑚对海洋古环境的记录等。最后提出中国南海冷水珊瑚礁研究展望,建议开展探测南海冷水珊瑚礁的分布,监测珊瑚礁区的生态环境,分析冷水石珊瑚群落特征,探讨冷水珊瑚礁对海洋酸化的响应机制,并利用南海冷水石珊瑚重建南海冷水珊瑚礁的发育历史及所记录的古海洋环境等研究工作。%Coral reefs are generally associated with shallow tropical seas; however, there are widespread and diverse coral ecosystems in deep waters on continental shelves, slopes, seamounts and ridges around the world. Cold-water corals have been known since the 18th century, but much fewer studies have been performed on deep-sea coral reefs compared with on tropical coral reefs. Along with the applications of modern submersibles and remotely operated vehicles (ROVs) to deep ocean exploration activities, more and more studies have been conducted and deep-sea coral reefs have become a research hotspot recently. This review includes: 1) the diversity and biogeographical distribution of cold-water corals;2) the growth characteristics of corals and related environmentalcontrols;3) the initiation and development of deep-sea coral reefs;4) the response of corals to ocean acidification;5) corals as valuable archives for paleoceanographic reconstructions. It also highlights the future research directions of cold-water coral reefs in the South China Sea.

  11. Coral reef fish smell leaves to find island homes

    Science.gov (United States)

    Dixson, Danielle L; Jones, Geoffrey P; Munday, Philip L; Planes, Serge; Pratchett, Morgan S; Srinivasan, Maya; Syms, Craig; Thorrold, Simon R

    2008-01-01

    Recent studies have shown that some coral reef fish larvae return to natal reefs, while others disperse to distant reefs. However, the sensory mechanisms used to find settlement sites are poorly understood. One hypothesis is that larvae use olfactory cues to navigate home or find other suitable reef habitats. Here we show a strong association between the clownfish Amphiprion percula and coral reefs surrounding offshore islands in Papua New Guinea. Host anemones and A. percula are particularly abundant in shallow water beneath overhanging rainforest vegetation. A series of experiments were carried out using paired-choice flumes to evaluate the potential role of water-borne olfactory cues in finding islands. Recently settled A. percula exhibited strong preferences for: (i) water from reefs with islands over water from reefs without islands; (ii) water collected near islands over water collected offshore; and (iii) water treated with either anemones or leaves from rainforest vegetation. Laboratory reared-juveniles exhibited the same positive response to anemones and rainforest vegetation, suggesting that olfactory preferences are innate rather than learned. We hypothesize that A. percula use a suite of olfactory stimuli to locate vegetated islands, which may explain the high levels of self-recruitment on island reefs. This previously unrecognized link between coral reefs and island vegetation argues for the integrated management of these pristine tropical habitats. PMID:18755672

  12. Nitrification in reef corals

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.; Wafar, S.; David, J.J.

    cells cmP2 (Drew 1972), it is reasonable to expect that nitrification will have to compete with assimilatory re- moval of NH,+. The relative importance of NH4+ flux in these two pathways can be evaluated with the present data on NO,- production... about the means in the es- timates, this correspondence shows that bacterial nitrification effectively competes with autotrophic uptake of NH,+ in coral- zooxanthellae symbiosis. In fact, our nitrification rates would be underestimates since losses...

  13. Low calcification in corals in the Great Barrier Reef

    Science.gov (United States)

    Bhattacharya, Atreyee

    2012-10-01

    Reef-building coral communities in the Great Barrier Reef—the world's largest coral reef—may now be calcifying at only about half the rate that they did during the 1970s, even though live coral cover may not have changed over the past 40 years, a new study finds. In recent decades, coral reefs around the world, home to large numbers of fish and other marine species, have been threatened by such human activities as pollution, overfishing, global warming, and ocean acidification; the latter affects ambient water chemistry and availability of calcium ions, which are critical for coral communities to calcify, build, and maintain reefs. Comparing data from reef surveys during the 1970s, 1980s, and 1990s with present-day (2009) measurements of calcification rates in One Tree Island, a coral reef covering 13 square kilometers in the southern part of the Great Barrier Reef, Silverman et al. show that the total calcification rates (the rate of calcification minus the rate of dissolution) in these coral communities have decreased by 44% over the past 40 years; the decrease appears to stem from a threefold reduction in calcification rates during nighttime.

  14. Coral reef ecosystem decline: changing dynamics of coral reef carbonate production and implications for reef growth potential

    Science.gov (United States)

    Perry, Chris

    2016-04-01

    Global-scale deteriorations in coral reef health have caused major shifts in species composition and are likely to be exacerbated by climate change. It has been suggested that one effect of these ecological changes will be to lower reef carbonate production rates, which will impair reef growth potential and, ultimately, may lead to states of net reef erosion. However, quantitative data to support such assertions are limited, and linkages between the ecological state of coral reefs and their past and present geomorphic performance (in other words their growth potential) are poorly resolved. Using recently collected data from sites in the Caribbean and Indian Ocean, and which have undergone very different post-disturbance ecological trajectories over the last ~20-30 years, the differential impacts of disturbance on contemporary carbonate production regimes and on reef growth potential can be explored. In the Caribbean, a region which has been severely impacted ecological over the last 30+ years, our datasets show that average carbonate production rates on reefs are now less than 50% of pre-disturbance rates, and that calculated accretion rates (mm yr-1) are an about order of magnitude lower within shallow water habitats compared to Holocene averages. Collectively, these data suggest that recent ecological declines are now propagating through the system to impact on the geomorphic performance of Caribbean reefs and will impair their future growth potential. In contrast, the carbonate budgets of most reefs across the Chagos archipelago (central Indian Ocean), which is geographically remote and largely isolated from direct human disturbances, have recovered rapidly from major past disturbances (specifically the 1998 coral bleaching event). The carbonate budgets on these remote reefs now average +3.7 G (G = kg CaCO3 m-2 yr-1). Most significantly the production rates on Acropora-dominated reefs, which were most severely impacted by the 1998 bleaching event, average +8.4 G

  15. Effects of solar ultraviolet radiation on coral reef organisms.

    Science.gov (United States)

    Banaszak, Anastazia T; Lesser, Michael P

    2009-09-01

    Organisms living in shallow-water tropical coral reef environments are exposed to high UVR irradiances due to the low solar zenith angles (the angle of the sun from the vertical), the natural thinness of the ozone layer over tropical latitudes, and the high transparency of the water column. The hypothesis that solar ultraviolet radiation (UVR, 290-400 nm) is an important factor that affects the biology and ecology of coral reef organisms dates only to about 1980. It has been previously suggested that increased levels of biologically effective ultraviolet B radiation (UVB, 290-320 nm), which is the waveband primarily affected by ozone depletion, would have relatively small effects on corals and coral reefs and that these effects might be observed as changes in the minimum depths of occurrence of important reef taxa such as corals. This conclusion was based on predictions of increases in UVR as well as its attenuation with depth using the available data on UVR irradiances, ozone levels, and optical properties of the water overlying coral reefs. Here, we review the experimental evidence demonstrating the direct and indirect effects of UVR, both UVB and ultraviolet A (UVA, 320-400 nm) on corals and other reef associated biota, with emphasis on those studies conducted since 1996. Additionally, we re-examine the predictions made in 1996 for the increase in UVB on reefs with currently available data, assess whether those predictions were reasonable, and look at what changes might occur on coral reefs in the future as the multiple effects (i.e. increased temperature, hypercapnia, and ocean acidification) of global climate change continue.

  16. 78 FR 67128 - Coral Reef Conservation Program; Meeting

    Science.gov (United States)

    2013-11-08

    ... National Oceanic and Atmospheric Administration Coral Reef Conservation Program; Meeting AGENCY: Coral Reef... of public comment. SUMMARY: Notice is hereby given of a public meeting of the U.S. Coral Reef Task... to do so. Established by Presidential Executive Order 13089 in 1998, the U.S. Coral Reef Task Force...

  17. Current status, crisis and conservation of coral reef ecosystems in China

    Directory of Open Access Journals (Sweden)

    ShaoHong Wu

    2012-03-01

    Full Text Available Harboring rich marine species and playing important ecological functions, coral reef ecosystems have attracted widespread concern around the world. Ecosystem diversity, conservation and management of coral reefs are becoming a hot research area. Coral reefs in China are mainly distributed in the South China Sea and Hainan, Taiwan, Hong Kong, Guangdong, and Guangxi coastal waters. In recent years, due to the global climate change and the growing impact of human activities, coral reef biodiversity in China have been reducing and the ecological functions of coral reef ecosystems are severely degenerating. In this paper we summarized the current status, crisis and conservation of coral reef ecosystems in China. Some progress in coral reef research was discussed.

  18. National Coral Reef Monitoring Program: Assessment of coral reef communities in Puerto Rico using the Coral Demographics method

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Coral Demographic method is one of two benthic surveys conducted in Puerto Rico as part of the National Coral Reef Monitoring Program (NCRMP). The coral...

  19. EFFECTS OF GLOBAL CHANGE ON CORAL REEF ECOSYSTEMS

    Science.gov (United States)

    Corals and coral reefs of the Caribbean and through the world are deteriorating at an accelerated rate. Several stressors are believed to contrbute to this decline, including global changes in atmospheric gases and land use patterns. In particular, warmer water temperatures and...

  20. EFFECTS OF GLOBAL CHANGE ON CORAL REEF ECOSYSTEMS

    Science.gov (United States)

    Corals and coral reefs of the Caribbean and through the world are deteriorating at an accelerated rate. Several stressors are believed to contrbute to this decline, including global changes in atmospheric gases and land use patterns. In particular, warmer water temperatures and...

  1. Virus-host interactions and their roles in coral reef health and disease.

    Science.gov (United States)

    Thurber, Rebecca Vega; Payet, Jérôme P; Thurber, Andrew R; Correa, Adrienne M S

    2017-04-01

    Coral reefs occur in nutrient-poor shallow waters, constitute biodiversity and productivity hotspots, and are threatened by anthropogenic disturbance. This Review provides an introduction to coral reef virology and emphasizes the links between viruses, coral mortality and reef ecosystem decline. We describe the distinctive benthic-associated and water-column- associated viromes that are unique to coral reefs, which have received less attention than viruses in open-ocean systems. We hypothesize that viruses of bacteria and eukaryotes dynamically interact with their hosts in the water column and with scleractinian (stony) corals to influence microbial community dynamics, coral bleaching and disease, and reef biogeochemical cycling. Last, we outline how marine viruses are an integral part of the reef system and suggest that the influence of viruses on reef function is an essential component of these globally important environments.

  2. Fish movement patterns in Virgin Islands National Park, Virgin Islands Coral Reef National Monument and adjacent waters

    OpenAIRE

    Friedlander, Alan M.; Monaco, Mark E.; Clark, Randy; Pittman, Simon J.; Beets, Jim; Boulon, Rafe; Callender, Russell; Christensen, John; Hile, Sarah D.; Kendall , Matt S.; Miller, Jeff; Rogers , Caroline; Starnoulis, Kosta; Wedding, Lisa; Roberson, Kimberly

    2013-01-01

    NOAA’s National Centers for Coastal Ocean Science (NCCOS)-Center for Coastal Monitoring and Assessment’s (CCMA) Biogeography Branch, National Park Service (NPS), US Geological Survey, and the University of Hawaii used acoustic telemetry to quantify spatial patterns and habitat affinities of reef fishes around the island of St. John, US Virgin Islands. The objective of the study was to define the movements of reef fishes among habitats within and between the Virgin Islands Coral Reef National ...

  3. Photography of Coral Reefs from ISS

    Science.gov (United States)

    Robinson, Julie A.

    2009-01-01

    This viewgraph presentation reviews the uses of photography from the International Space Station (ISS) in studying Earth's coral reefs. The photographs include reefs in various oceans . The photographs have uses for science in assisting NASA mapping initiatives, distribution worldwide through ReefBase, and by biologist in the field.

  4. Coral larvae move toward reef sounds.

    Science.gov (United States)

    Vermeij, Mark J A; Marhaver, Kristen L; Huijbers, Chantal M; Nagelkerken, Ivan; Simpson, Stephen D

    2010-05-14

    Free-swimming larvae of tropical corals go through a critical life-phase when they return from the open ocean to select a suitable settlement substrate. During the planktonic phase of their life cycle, the behaviours of small coral larvae (coral larvae respond to acoustic cues that may facilitate detection of habitat from large distances and from upcurrent of preferred settlement locations. Using in situ choice chambers, we found that settling coral larvae were attracted to reef sounds, produced mainly by fish and crustaceans, which we broadcast underwater using loudspeakers. Our discovery that coral larvae can detect and respond to sound is the first description of an auditory response in the invertebrate phylum Cnidaria, which includes jellyfish, anemones, and hydroids as well as corals. If, like settlement-stage reef fish and crustaceans, coral larvae use reef noise as a cue for orientation, the alleviation of noise pollution in the marine environment may gain further urgency.

  5. Coral community change on a turbid-zone reef complex: developing baseline records for the central Great Barrier Reef's nearshore coral reefs

    Science.gov (United States)

    Johnson, Jamie; Perry, Chris; Smithers, Scott; Morgan, Kyle; Johnson, Kenneth

    2016-04-01

    Understanding past coral community development and reef growth is crucial for placing contemporary ecological and environmental change within appropriate reef-building timescales. Coral reefs located within coastal inner-shelf zones are widely perceived to be most susceptible to declining water quality due to their proximity to modified river catchments. On the inner-shelf of Australia's Great Barrier Reef (GBR) the impacts and magnitude of declining water quality since European settlement (c. 1850 A.D.) still remain unclear. This relates to ongoing debates concerning the significance of increased sediment yields against the naturally high background sedimentary regimes and the paucity of long-term (>decadal) ecological datasets. To provide baseline records for interpreting coral community change within the turbid inner-shelf waters of the GBR, 21 cores were recovered from five nearshore reefs spanning an evolutionary spectrum of reef development. Discrete intervals pre- and post-dating European settlement, but deposited at equivalent water depths, were identified by radiocarbon dating, enabling the discrimination of extrinsic and intrinsic driven shifts within the coral palaeo-record. We report no discernible evidence of anthropogenically-driven disturbance on the coral community records at these sites. Instead, significant transitions in coral community assemblages relating to water depth and vertical reef accretion were observed. We suggest that these records may be used to contextualise observed contemporary ecological change within similar environments on the GBR.

  6. Predicting climate-driven regime shifts versus rebound potential in coral reefs.

    Science.gov (United States)

    Graham, Nicholas A J; Jennings, Simon; MacNeil, M Aaron; Mouillot, David; Wilson, Shaun K

    2015-02-05

    Climate-induced coral bleaching is among the greatest current threats to coral reefs, causing widespread loss of live coral cover. Conditions under which reefs bounce back from bleaching events or shift from coral to algal dominance are unknown, making it difficult to predict and plan for differing reef responses under climate change. Here we document and predict long-term reef responses to a major climate-induced coral bleaching event that caused unprecedented region-wide mortality of Indo-Pacific corals. Following loss of >90% live coral cover, 12 of 21 reefs recovered towards pre-disturbance live coral states, while nine reefs underwent regime shifts to fleshy macroalgae. Functional diversity of associated reef fish communities shifted substantially following bleaching, returning towards pre-disturbance structure on recovering reefs, while becoming progressively altered on regime shifting reefs. We identified threshold values for a range of factors that accurately predicted ecosystem response to the bleaching event. Recovery was favoured when reefs were structurally complex and in deeper water, when density of juvenile corals and herbivorous fishes was relatively high and when nutrient loads were low. Whether reefs were inside no-take marine reserves had no bearing on ecosystem trajectory. Although conditions governing regime shift or recovery dynamics were diverse, pre-disturbance quantification of simple factors such as structural complexity and water depth accurately predicted ecosystem trajectories. These findings foreshadow the likely divergent but predictable outcomes for reef ecosystems in response to climate change, thus guiding improved management and adaptation.

  7. Short-term assessment of the sediment deposition rate and water conditions during a rainy season on La Azufrada coral reef, Gorgona Island, Colombia

    Directory of Open Access Journals (Sweden)

    Diego F. Lozano-Cortés

    2014-02-01

    Full Text Available One of the major stresses on corals is the settlement of suspended sediment on their surfaces. This leads to the blocking of light, the covering of the coral mucus surface and an increased risk of disease. For this reason sediment deposition on a reef is considered a highly important variable in coral reef studies. With the use of sediment traps and oceanographic sensors, the sediment deposition rate and water conditions during a rainy season (April-May 2009 on a Tropical Eastern Pacific coral reef (La Azufrada at Gorgona Island in Colombia were investigated. To quantify sediment deposition, sediment traps were established in nine stations along the coral reef (three stations per reef zone: backreef, flat and slope. To minimize disturbance by aquatic organisms in the sediment traps these were filled with hypersaline borax-buffered 10% formaline solution before their deployment; animals found in the filter contents were fixed and stored in a 4% formalin solution, frozen and identified in the laboratory. To determine the water conditions, discrete samples of water from 1 m and 10 m depths were collected using a Niskin bottle. Oceanographic variables (temperature, salinity and dissolved oxygen as well as turbidity, chlorophyll and nutrient concentration (nitrite, nitrate and phosphorus were measured in the samples from both depths. Vertical records of temperature and salinity were carried out with a Seabird-19 CTD nearest to La Azufrada and water transparency was measured using a Secchi disk. We found a mean trap collection rate of 23.30±4.34gm-2d-1 and did not detect a significant difference in the trap collection rate among reef zones. The mean temperature and salinity in the coral reef depth zone (0-10m layer were 26.98±0.19°C and 32.60±0.52, respectively. Fourteen taxonomic groups of invertebrates were detected inside the sediment traps with bivalves and copepods being the most abundant and frequen. The findings presented here constitute

  8. Short-term assessment of the sediment deposition rate and water conditions during a rainy season on La Azufrada coral reef, Gorgona Island, Colombia

    KAUST Repository

    Lozano-Cortés, Diego F

    2014-02-01

    One of the major stresses on corals is the settlement of suspended sediment on their surfaces. This leads to the blocking of light, the covering of the coral mucus surface and an increased risk of disease. For this reason sediment deposition on a reef is considered a highly important variable in coral reef studies. With the use of sediment traps and oceanographic sensors, the sediment deposition rate and water conditions during a rainy season (April-May 2009) on a Tropical Eastern Pacific coral reef (La Azufrada) at Gorgona Island in Colombia were investigated. To quantify sediment deposition, sediment traps were established in nine stations along the coral reef (three stations per reef zone: backreef, flat and slope). To minimize disturbance by aquatic organisms in the sediment traps these were filled with hypersaline borax-buffered 10% formaline solution before their deployment; animals found in the filter contents were fixed and stored in a 4% formalin solution, frozen and identified in the laboratory. To determine the water conditions, discrete samples of water from 1 m and 10 m depths were collected using a Niskin bottle. Oceanographic variables (temperature, salinity and dissolved oxygen) as well as turbidity, chlorophyll and nutrient concentration (nitrite, nitrate and phosphorus) were measured in the samples from both depths. Vertical records of temperature and salinity were carried out with a Seabird-19 CTD nearest to La Azufrada and water transparency was measured using a Secchi disk. We found a mean trap collection rate of 23.30±4.34gm-2d-1 and did not detect a significant difference in the trap collection rate among reef zones. The mean temperature and salinity in the coral reef depth zone (0-10m layer) were 26.98±0.19°C and 32.60±0.52, respectively. Fourteen taxonomic groups of invertebrates were detected inside the sediment traps with bivalves and copepods being the most abundant and frequen. The findings presented here constitute the first report

  9. Forest conservation delivers highly variable coral reef conservation outcomes.

    Science.gov (United States)

    Klein, Carissa J; Jupiter, Stacy D; Selig, Elizabeth R; Watts, Matthew E; Halpern, Benjamin S; Kamal, Muhammad; Roelfsema, Chris; Possingham, Hugh P

    2012-06-01

    Coral reefs are threatened by human activities on both the land (e.g., deforestation) and the sea (e.g., overfishing). Most conservation planning for coral reefs focuses on removing threats in the sea, neglecting management actions on the land. A more integrated approach to coral reef conservation, inclusive of land-sea connections, requires an understanding of how and where terrestrial conservation actions influence reefs. We address this by developing a land-sea planning approach to inform fine-scale spatial management decisions and test it in Fiji. Our aim is to determine where the protection of forest can deliver the greatest return on investment for coral reef ecosystems. To assess the benefits of conservation to coral reefs, we estimate their relative condition as influenced by watershed-based pollution and fishing. We calculate the cost-effectiveness of protecting forest and find that investments deliver rapidly diminishing returns for improvements to relative reef condition. For example, protecting 2% of forest in one area is almost 500 times more beneficial than protecting 2% in another area, making prioritization essential. For the scenarios evaluated, relative coral reef condition could be improved by 8-58% if all remnant forest in Fiji were protected rather than deforested. Finally, we determine the priority of each coral reef for implementing a marine protected area when all remnant forest is protected for conservation. The general results will support decisions made by the Fiji Protected Area Committee as they establish a national protected area network that aims to protect 20% of the land and 30% of the inshore waters by 2020. Although challenges remain, we can inform conservation decisions around the globe by tackling the complex issues relevant to integrated land-sea planning.

  10. Reef coral δ15O thermometer in Hainan island waters,South China Sea

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    An 18-year-long (1981-1998) study was conducted in Hainan Island wa ters (22°20'N, 110°39′E) to determine the relationship between δ18O in skeletal arag onite carbonate and sea surface temperature (SST) in porites lutea of reef-building corals. δ18O values in skeletal aragonite carbonate were measured by means of mass spectrometry. Coral samples grew at 5m depth at Longwan Bay. Monthly measure ments of the SST from 1960 to 1998 were taken at Qinglan Bay adjacent to the place of the collected samples. The thermometer shows that SST=-4.16 δ18OpDB + 4.9 (r=0.80) and dδ18O/dT=-0.24 permil/°C. The δ18O thermometer is strongly influ enced by the rainfall and runoff. Using the thermometer, the SST in the past hundred years with monthly resolution will be reconstructed and the climatic change in the northern area of South China Sea will be hindcasted

  11. NOAA's Coral Reef Conservation Program: 2016 projects to address coral reef conservation issues

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2016 the following projects will take place to address aspects of coral reef conservation: Enhancing Management of Pacific ESA-listed Corals with Improved Utility...

  12. Hydrodynamic Regimes Affect Coral Reef Resilience to Ocean Acidification

    Science.gov (United States)

    Teneva, L. T.; Dunbar, R. B.; Koseff, J. R.; Fleischfresser, J. D.; Koweek, D.

    2013-05-01

    Caribbean reefs hold tremendous value as sources of food, income, coastal protection, in addition to their cultural significance. Recently, studies showed that Caribbean reef growth has been surpassed in places by excessive rates of erosion due to climate change. The rates of coral reef response to ocean pH changes and warming and the implications for ecosystem resilience remain largely unknown. One way to investigate the potential structural resilience of reefs to climate change is to measure the physical oceanographic conditions in the area. Determining the hydrodynamic regimes and residence time of water in a particular reef environment is crucial to understanding the rates of future warming and acidification a reef site would experience. Our work on Pacific Islands' hydrodynamics - Central Equatorial Pacific, Great Barrier Reef, and Western Pacific -- would be of interest to Caribbean physical oceanographers and coral reef scientists. We use a combination of Acoustic Doppler Current Profilers, Acoustic Doppler Velocimeters, temperature and salinity sensors, and pressure sensors to characterize reef hydrodynamic regimes. Our work indicates that shallower, more protected reef habitats are characterized by longer residence times, their biological signals are strongly tidally modulated, essentially subjecting such habitats to higher rates of warming and acidification in the future. Reef crest environments and fore reef habitats, on the other hand, are well-mixed with open-ocean water. The hydrodynamic regimes there condition such reef sites to more attenuated temperature and pH ranges, conditions more typical of the open ocean. Our work suggests that investigating the geomorphology and resulting localized hydrodynamics in a reef area can provide insights into the relative rates at which a reef could resist or succumb to impacts of ocean acidification. Such information for different reef islands, in the Pacific or Caribbean basins, could provide helpful insights

  13. The cumulative impacts of repeated heavy rainfall, flooding and altered water quality on the high-latitude coral reefs of Hervey Bay, Queensland, Australia.

    Science.gov (United States)

    Butler, I R; Sommer, B; Zann, M; Zhao, J-X; Pandolfi, J M

    2015-07-15

    Terrestrial runoff and flooding have resulted in major impacts on coral communities worldwide, but we lack detailed understanding of flood plume conditions and their ecological effects. Over the course of repeated flooding between 2010 and 2013, we measured coral cover and water quality on the high-latitude coral reefs of Hervey Bay, Queensland, Australia. In 2013, salinity, total suspended solids, total nitrogen and total phosphorus were altered for up to six months post-flooding. Submarine groundwater caused hypo-saline conditions for a further four months. Despite the greater magnitude of flooding in 2013, declines in coral abundance (∼28%) from these floods were lower than the 2011 flood (∼40%), which occurred immediately after a decade of severe drought. There was an overall cumulative decrease of coral by ∼56% from 2010 to 2013. Our study highlights the need for local scale monitoring and research to facilitate informed management and conservation of catchments and marine environments.

  14. New perspectives on ecological mechanisms affecting coral recruitment on reefs

    NARCIS (Netherlands)

    Ritson-Williams, R.; Arnold, S.N.; Fogarty, N.D.; Steneck, R.S.; Vermeij, M.J.A.; Paul, V.J.

    2009-01-01

    Coral mortality has increased in recent decades, making coral recruitment more important than ever in sustaining coral reef ecosystems and contributing to their resilience. This review summarizes existing information on ecological factors affecting scleractinian coral recruitment. Successful recruit

  15. New perspectives on ecological mechanisms affecting coral recruitment on reefs

    NARCIS (Netherlands)

    Ritson-Williams, R.; Arnold, S.N.; Fogarty, N.D.; Steneck, R.S.; Vermeij, M.J.A.; Paul, V.J.

    2009-01-01

    Coral mortality has increased in recent decades, making coral recruitment more important than ever in sustaining coral reef ecosystems and contributing to their resilience. This review summarizes existing information on ecological factors affecting scleractinian coral recruitment. Successful

  16. Sewage impacts coral reefs at multiple levels of ecological organization.

    Science.gov (United States)

    Reopanichkul, Pasinee; Schlacher, Thomas A; Carter, R W; Worachananant, Suchai

    2009-09-01

    Against a backdrop of rising sea temperatures and ocean acidification which pose global threats to coral reefs, excess nutrients and turbidity continue to be significant stressors at regional and local scales. Because interventions usually require local data on pollution impacts, we measured ecological responses to sewage discharges in Surin Marine Park, Thailand. Wastewater disposal significantly increased inorganic nutrients and turbidity levels, and this degradation in water quality resulted in substantial ecological shifts in the form of (i) increased macroalgal density and species richness, (ii) lower cover of hard corals, and (iii) significant declines in fish abundance. Thus, the effects of nutrient pollution and turbidity can cascade across several levels of ecological organization to change key properties of the benthos and fish on coral reefs. Maintenance or restoration of ecological reef health requires improved wastewater management and run-off control for reefs to deliver their valuable ecosystems services.

  17. Physical and biological controls on the carbonate chemistry of coral reef waters: effects of metabolism, wave forcing, sea level, and geomorphology.

    Directory of Open Access Journals (Sweden)

    James L Falter

    Full Text Available We present a three-dimensional hydrodynamic-biogeochemical model of a wave-driven coral-reef lagoon system using the circulation model ROMS (Regional Ocean Modeling System coupled with the wave transformation model SWAN (Simulating WAves Nearshore. Simulations were used to explore the sensitivity of water column carbonate chemistry across the reef system to variations in benthic reef metabolism, wave forcing, sea level, and system geomorphology. Our results show that changes in reef-water carbonate chemistry depend primarily on the ratio of benthic metabolism to the square root of the onshore wave energy flux as well as on the length and depth of the reef flat; however, they are only weakly dependent on channel geometry and the total frictional resistance of the reef system. Diurnal variations in pCO(2, pH, and aragonite saturation state (Ω(ar are primarily dependent on changes in net production and are relatively insensitive to changes in net calcification; however, net changes in pCO(2, pH, and Ω(ar are more strongly influenced by net calcification when averaged over 24 hours. We also demonstrate that a relatively simple one-dimensional analytical model can provide a good description of the functional dependence of reef-water carbonate chemistry on benthic metabolism, wave forcing, sea level, reef flat morphology, and total system frictional resistance. Importantly, our results indicate that any long-term (weeks to months net offsets in reef-water pCO(2 relative to offshore values should be modest for reef systems with narrow and/or deep lagoons. Thus, the long-term evolution of water column pCO(2 in many reef environments remains intimately connected to the regional-scale oceanography of offshore waters and hence directly influenced by rapid anthropogenically driven increases in pCO(2.

  18. Coral mucus functions as an energy carrier and particle trap in the reef ecosystem

    DEFF Research Database (Denmark)

    Wild, C.; Huettel, M.; Klueter, A.

    2004-01-01

    Zooxanthellae, endosymbiotic algae of reef-building corals, substantially contribute to the high gross primary production of coral reefs(1), but corals exude up to half of the carbon assimilated by their zooxanthellae as mucus(2,3). Here we show that released coral mucus efficiently traps organic...... matter from the water column and rapidly carries energy and nutrients to the reef lagoon sediment, which acts as a biocatalytic mineralizing filter. In the Great Barrier Reef, the dominant genus of hard corals, Acropora, exudes up to 4.8 litres of mucus per square metre of reef area per day. Between 56......% and 80% of this mucus dissolves in the reef water, which is filtered through the lagoon sands. Here, coral mucus is degraded at a turnover rate of at least 7% per hour. Detached undissolved mucus traps suspended particles, increasing its initial organic carbon and nitrogen content by three orders...

  19. Coral mucus functions as an energy carrier and particle trap in the reef ecosystem

    DEFF Research Database (Denmark)

    Wild, C.; Huettel, M.; Klueter, A.

    2004-01-01

    Zooxanthellae, endosymbiotic algae of reef-building corals, substantially contribute to the high gross primary production of coral reefs(1), but corals exude up to half of the carbon assimilated by their zooxanthellae as mucus(2,3). Here we show that released coral mucus efficiently traps organic...... matter from the water column and rapidly carries energy and nutrients to the reef lagoon sediment, which acts as a biocatalytic mineralizing filter. In the Great Barrier Reef, the dominant genus of hard corals, Acropora, exudes up to 4.8 litres of mucus per square metre of reef area per day. Between 56......% and 80% of this mucus dissolves in the reef water, which is filtered through the lagoon sands. Here, coral mucus is degraded at a turnover rate of at least 7% per hour. Detached undissolved mucus traps suspended particles, increasing its initial organic carbon and nitrogen content by three orders...

  20. Cold-water coral reefs and adjacent sponge grounds: Hotspots of benthic respiration and organic carbon cycling in the deep sea

    Directory of Open Access Journals (Sweden)

    Cecile eCathalot

    2015-06-01

    Full Text Available Cold-water coral reefs and adjacent sponge grounds are distributed widely in the deep ocean, where only a small fraction of the surface productivity reaches the seafloor as detritus. It remains elusive how these hotspots of biodiversity can thrive in such a food-limited environment, as data on energy flow and organic carbon utilization are critically lacking. Here we report in situ community respiration rates for cold-water coral and sponge ecosystems obtained by the non-invasive aquatic Eddy Correlation technique. Oxygen uptake rates over coral reefs and adjacent sponge grounds in the Træna Coral Field (Norway were 9-20 times higher than those of the surrounding soft sediments. These high respiration rates indicate strong organic matter consumption, and hence suggest a local focusing onto these ecosystems of the downward flux of organic matter that is exported from the surface ocean. Overall, our results show that coral reefs and adjacent sponge grounds are hotspots of carbon processing in the food-limited deep ocean, and that these deep-sea ecosystems play a more prominent role in marine biogeochemical cycles than previously recognized.

  1. Destruction of corals and other reef animals by coral spawn slicks on Ningaloo Reef, Western Australia

    Science.gov (United States)

    Simpson, C. J.; Cary, J. L.; Masini, R. J.

    1993-11-01

    In March 1989, most of the corals near Coral Bay, off the north-western coastline of Australia, spawned several nights earlier than usual. Flood, rather than ebb, tides at the time of spawning combined with light north-west winds and low swell conditions to restrict the dispersal of coral propagules and, as a result, large amounts of coral spawn were trapped in the bay, forming extensive slicks. Fish and other animals began to die almost immediately, and over the next few days, over 1 million fish, representing at least 80 species, were washed ashore. A survey of the benthic communities revealed extensive mortality of corals and other reef animals over an area of about 3 km2. Live coral cover in this area decreased from 42.9% to 9.4% and several large coral colonies up to 10 m in diameter were killed. The observed mortality was presumably the result of hypoxia (oxygen depletion) created initially by the respiratory demand of the coral spawn and maintained by the biological oxygen demand of the decomposing spawn slicks and dead animals. Anecdotal reports of corals and other reef animals dying in the vicinity of coral spawn slicks on other reefs in Western Australia suggest that this phenomenon may be a relatively common event on shallow coral reefs where coral mass spawning occurs. These records and observations document, for the first time, a new source of natural disturbance that has a significant influence on the community structure of some coral reefs.

  2. MANGROVE-DERIVED NUTRIENTS AND CORAL REEFS

    Science.gov (United States)

    Understanding the consequences of the declining global cover of mangroves due to anthropogenic disturbance necessitates consideration of how mangrove-derived nutrients contribute to threatened coral reef systems. We sampled potential sources of organic matter and a suite of sessi...

  3. Coral Reef Watch, Nighttime Temperature, 50 km

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA Coral Reef Watch provides sea surface temperature (SST) products derived from NOAA's Polar Operational Environmental Satellites (POES). This data provides...

  4. Ecosystem function and biodiversity on coral reefs

    OpenAIRE

    1994-01-01

    The article highlights a workshop held in Key West, Florida in November 1993 attended by a group of 35 international scientists where topics of ecosystem function and biodiversity on coral reefs were discussed.

  5. Coral Reef Watch, Temperature Anomaly, 50 km

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA Coral Reef Watch distributes SST anomaly data using a combination of the POES AVHRR Global Area Coverage data, and data from a climatological database. AVHRR...

  6. Black reefs: iron-induced phase shifts on coral reefs

    NARCIS (Netherlands)

    Wegley Kelly, L.; Barott, K.L.; Dinsdale, E.; Friedlander, A.M.; Nosrat, B.; Obura, D.; Sala, E.; Sandin, S.A.; Smith, J.E.; Vermeij, M.J.A.; Williams, G.J.; Willner, D.; Rohwer, F.

    2012-01-01

    The Line Islands are calcium carbonate coral reef platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The reefs surrounding the s

  7. Black reefs: iron-induced phase shifts on coral reefs

    NARCIS (Netherlands)

    Wegley Kelly, L.; Barott, K.L.; Dinsdale, E.; Friedlander, A.M.; Nosrat, B.; Obura, D.; Sala, E.; Sandin, S.A.; Smith, J.E.; Vermeij, M.J.A.; Williams, G.J.; Willner, D.; Rohwer, F.

    2012-01-01

    The Line Islands are calcium carbonate coral reef platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The reefs surrounding the

  8. Brazilian coral reefs in a period of global change: A synthesis

    Directory of Open Access Journals (Sweden)

    Zelinda M. A. N. Leão

    Full Text Available Abstract Brazilian coral reefs form structures significantly different from the well-known reef models, as follows: (i they have a growth form of mushroom-shaped coral pinnacles called "chapeirões", (ii they are built by a low diversity coral fauna rich in endemic species, most of them relic forms dating back to the Tertiary, and (iii the nearshore bank reefs are surrounded by siliciclastic sediments. The reefs are distributed in the following four major sectors along the Brazilian coast: the northern, the northeastern and the eastern regions, and the oceanic islands, but certain isolated coral species can be found in warmer waters in embayments of the southern region. There are different types of bank reefs, fringing reefs, isolated "chapeirões" and an atoll present along the Brazilian coast. Corals, milleporids and coralline algae build the rigid frame of the reefs. The areas in which the major coral reefs occur correspond to regions in which nearby urban centers are experiencing accelerated growth, and tourism development is rapidly increasing. The major human effects on the reef ecosystem are mostly associated with the increased sedimentation due to the removal of the Atlantic rainforest and the discharge of industrial and urban effluents. The effects of the warming of oceanic waters that had previously affected several reef areas with high intensity coral bleaching had not shown, by the time of the 2010 event, any episodes of mass coral mortality on Brazilian reefs.

  9. Degradation and recovery of Caribbean coral reefs

    OpenAIRE

    Paredes, Gustavo Adolfo

    2009-01-01

    Coral reef ecosystems worldwide have been seriously impacted by human activities. The current deteriorated state of coral reef communities is the result of a long history of exploitation. The scientific community has recognized the extent of degradation, its consequences, and how little we have done to avoid further degradation only in the last two decades. Marine reserves are one of the main conservation actions that could help to reduce the impacts of human activities on the ecosystem, part...

  10. Ecological Processes and Contemporary Coral Reef Management

    OpenAIRE

    Angela Dikou

    2010-01-01

    Top-down controls of complex foodwebs maintain the balance among the critical groups of corals, algae, and herbivores, thus allowing the persistence of corals reefs as three-dimensional, biogenic structures with high biodiversity, heterogeneity, resistance, resilience and connectivity, and the delivery of essential goods and services to societies. On contemporary reefs world-wide, however, top-down controls have been weakened due to reduction in herbivory levels (overfishing or disease outbre...

  11. High coral cover on a mesophotic, subtropical island platform at the limits of coral reef growth

    Science.gov (United States)

    Linklater, Michelle; Carroll, Andrew G.; Hamylton, Sarah M.; Jordan, Alan R.; Brooke, Brendan P.; Nichol, Scott L.; Woodroffe, Colin D.

    2016-11-01

    Balls Pyramid is a volcanic monolith rising 552 m from the Tasman Sea, 24 km southeast of the Pacific Ocean's southernmost modern coral reef at Lord Howe Island. High resolution seabed mapping of the shelf surrounding Balls Pyramid has revealed an extensive submerged reef structure in 30-50 m water depth, covering an area of 87 km2. Benthic community composition analysis of high-resolution still images revealed abundant scleractinian corals on the submerged reef, extending to a maximum depth of 94 m. Scleractinian coral occurred predominantly in 30-40 m depth where it comprised 13.3% of benthic cover within this depth range. Average scleractinian coral cover for all transects was 6.7±12.2%, with the highest average transect cover of 19.4±14.3% and up to 84% cover recorded for an individual still image. The remaining substrate comprised mixed benthos with veneers of carbonate sand. Benthic data were shown to significantly relate to the underlying geomorphology. BVSTEP analyses identified depth and backscatter as the strongest correlating explanatory variables driving benthic community structure. The prevalence of scleractinian corals on the submerged reef features at Balls Pyramid, and the mesophotic depths to which these corals extend, demonstrates the important role of this subtropical island shelf as habitat for modern coral communities in the southwest Pacific Ocean. As Balls Pyramid is located beyond the known latitudinal limit of coral reef formation, these findings have important implications for potential coral reef range expansion and deep reef refugia under a changing climate.

  12. Prioritizing land and sea conservation investments to protect coral reefs.

    Directory of Open Access Journals (Sweden)

    Carissa J Klein

    Full Text Available BACKGROUND: Coral reefs have exceptional biodiversity, support the livelihoods of millions of people, and are threatened by multiple human activities on land (e.g. farming and in the sea (e.g. overfishing. Most conservation efforts occur at local scales and, when effective, can increase the resilience of coral reefs to global threats such as climate change (e.g. warming water and ocean acidification. Limited resources for conservation require that we efficiently prioritize where and how to best sustain coral reef ecosystems. METHODOLOGY/PRINCIPAL FINDINGS: Here we develop the first prioritization approach that can guide regional-scale conservation investments in land- and sea-based conservation actions that cost-effectively mitigate threats to coral reefs, and apply it to the Coral Triangle, an area of significant global attention and funding. Using information on threats to marine ecosystems, effectiveness of management actions at abating threats, and the management and opportunity costs of actions, we calculate the rate of return on investment in two conservation actions in sixteen ecoregions. We discover that marine conservation almost always trumps terrestrial conservation within any ecoregion, but terrestrial conservation in one ecoregion can be a better investment than marine conservation in another. We show how these results could be used to allocate a limited budget for conservation and compare them to priorities based on individual criteria. CONCLUSIONS/SIGNIFICANCE: Previous prioritization approaches do not consider both land and sea-based threats or the socioeconomic costs of conserving coral reefs. A simple and transparent approach like ours is essential to support effective coral reef conservation decisions in a large and diverse region like the Coral Triangle, but can be applied at any scale and to other marine ecosystems.

  13. Prioritizing land and sea conservation investments to protect coral reefs.

    Science.gov (United States)

    Klein, Carissa J; Ban, Natalie C; Halpern, Benjamin S; Beger, Maria; Game, Edward T; Grantham, Hedley S; Green, Alison; Klein, Travis J; Kininmonth, Stuart; Treml, Eric; Wilson, Kerrie; Possingham, Hugh P

    2010-08-30

    Coral reefs have exceptional biodiversity, support the livelihoods of millions of people, and are threatened by multiple human activities on land (e.g. farming) and in the sea (e.g. overfishing). Most conservation efforts occur at local scales and, when effective, can increase the resilience of coral reefs to global threats such as climate change (e.g. warming water and ocean acidification). Limited resources for conservation require that we efficiently prioritize where and how to best sustain coral reef ecosystems. Here we develop the first prioritization approach that can guide regional-scale conservation investments in land- and sea-based conservation actions that cost-effectively mitigate threats to coral reefs, and apply it to the Coral Triangle, an area of significant global attention and funding. Using information on threats to marine ecosystems, effectiveness of management actions at abating threats, and the management and opportunity costs of actions, we calculate the rate of return on investment in two conservation actions in sixteen ecoregions. We discover that marine conservation almost always trumps terrestrial conservation within any ecoregion, but terrestrial conservation in one ecoregion can be a better investment than marine conservation in another. We show how these results could be used to allocate a limited budget for conservation and compare them to priorities based on individual criteria. Previous prioritization approaches do not consider both land and sea-based threats or the socioeconomic costs of conserving coral reefs. A simple and transparent approach like ours is essential to support effective coral reef conservation decisions in a large and diverse region like the Coral Triangle, but can be applied at any scale and to other marine ecosystems.

  14. Energetic differences between bacterioplankton trophic groups and coral reef resistance.

    Science.gov (United States)

    McDole Somera, Tracey; Bailey, Barbara; Barott, Katie; Grasis, Juris; Hatay, Mark; Hilton, Brett J; Hisakawa, Nao; Nosrat, Bahador; Nulton, James; Silveira, Cynthia B; Sullivan, Chris; Brainard, Russell E; Rohwer, Forest

    2016-04-27

    Coral reefs are among the most productive and diverse marine ecosystems on the Earth. They are also particularly sensitive to changing energetic requirements by different trophic levels. Microbialization specifically refers to the increase in the energetic metabolic demands of microbes relative to macrobes and is significantly correlated with increasing human influence on coral reefs. In this study, metabolic theory of ecology is used to quantify the relative contributions of two broad bacterioplankton groups, autotrophs and heterotrophs, to energy flux on 27 Pacific coral reef ecosystems experiencing human impact to varying degrees. The effective activation energy required for photosynthesis is lower than the average energy of activation for the biochemical reactions of the Krebs cycle, and changes in the proportional abundance of these two groups can greatly affect rates of energy and materials cycling. We show that reef-water communities with a higher proportional abundance of microbial autotrophs expend more metabolic energy per gram of microbial biomass. Increased energy and materials flux through fast energy channels (i.e. water-column associated microbial autotrophs) may dampen the detrimental effects of increased heterotrophic loads (e.g. coral disease) on coral reef systems experiencing anthropogenic disturbance.

  15. Coral diseases and bleaching on Colombian Caribbean coral reefs.

    Science.gov (United States)

    Navas-Camacho, Raúl; Gil-Agudelo, Diego Luis; Rodríguez-Ramírez, Alberto; Reyes-Nivia, María Catalina; Garzón-Ferreira, Jaime

    2010-05-01

    Since 1998 the National Monitoring System for the Coral Reefs of Colombia (SIMAC) has monitored the occurrence of coral bleaching and diseases in some Colombian coral reefs (permanent stations at San Andres Island, Rosario Islands, Tayrona, San Bernardo Islands and Urabá). The main purpose is to evaluate their health status and to understand the factors that have been contributing to their decline. To estimate these occurrences, annual surveys in 126 permanent belt transects (10 x 2m) with different depth intervals (3-6 meters, 9-12 meters and 15-18 meters) are performed at all reef sites. Data from the 1998-2004 period, revealed that San Andrés Island had many colonies with diseases (38.9 colonies/m2), and Urabá had high numbers with bleaching (54.4 colonies/m2). Of the seven reported coral diseases studied, Dark Spots Disease (DSD), and White Plague Disease (WPD) were noteworthy because they occurred in all Caribbean monitored sites, and because of their high interannual infection incidence. Thirty five species of scleractinian corals were affected by at least one disease and a high incidence of coral diseases on the main reef builders is documented. Bleaching was present in 34 species. During the whole monitoring period, Agaricia agaricites and Siderastrea siderea were the species most severely affected by DSD and bleaching, respectively. Diseases on species such as Agaricia fragilis, A. grahamae, A. humilis, Diploria clivosa, Eusmilia fastigiata, Millepora complanata, and Mycetophyllia aliciae are recorded for first time in Colombia. We present bleaching and disease incidences, kinds of diseases, coral species affected, reef localities studied, depth intervals of surveys, and temporal (years) variation for each geographic area. This variation makes difficult to clearly determine defined patterns or general trends for monitored reefs. This is the first long-term study of coral diseases and bleaching in the Southwestern Caribbean, and one of the few long

  16. Rapid fluctuations in flow and water-column properties in Asan Bay, Guam: implications for selective resilience of coral reefs in warming seas

    Science.gov (United States)

    Storlazzi, C.D.; Field, M.E.; Cheriton, O.M.; Presto, M.K.; Logan, J.B.

    2013-01-01

    Hydrodynamics and water-column properties were investigated off west-central Guam from July 2007 through January 2008. Rapid fluctuations, on time scales of 10s of min, in currents, temperature, salinity, and acoustic backscatter were observed to occur on sub-diurnal frequencies along more than 2 km of the fore reef but not at the reef crest. During periods characterized by higher sea-surface temperatures (SSTs), weaker wind forcing, smaller ocean surface waves, and greater thermal stratification, rapid decreases in temperature and concurrent rapid increases in salinity and acoustic backscatter coincided with onshore-directed near-bed currents and offshore-directed near-surface currents. During the study, these cool-water events, on average, lasted 2.3 h and decreased the water temperature 0.57 °C, increased the salinity 0.25 PSU, and were two orders of magnitude more prevalent during the summer season than the winter. During the summer season when the average satellite-derived SST anomaly was +0.63 °C, these cooling events, on average, lowered the temperature 1.14 °C along the fore reef but only 0.11 °C along the reef crest. The rapid shifts appear to be the result of internal tidal bores pumping cooler, more saline, higher-backscatter oceanic water from depths >50 m over cross-shore distances of 100 s of m into the warmer, less saline waters at depths of 20 m and shallower. Such internal bores appear to have the potential to buffer shallow coral reefs from predicted increases in SSTs by bringing cool, offshore water to shallow coral environments. These cooling internal bores may also provide additional benefits to offset stress such as supplying food to thermally stressed corals, reducing stress due to ultraviolet radiation and/or low salinity, and delivering coral larvae from deeper reefs not impacted by surface thermal stress. Thus, the presence of internal bores might be an important factor locally in the resilience of select coral reefs facing increased

  17. Fine-scale nutrient and carbonate system dynamics around cold-water coral reefs in the northeast Atlantic.

    Science.gov (United States)

    Findlay, Helen S; Hennige, Sebastian J; Wicks, Laura C; Navas, Juan Moreno; Woodward, E Malcolm S; Roberts, J Murray

    2014-01-20

    Ocean acidification has been suggested as a serious threat to the future existence of cold-water corals (CWC). However, there are few fine-scale temporal and spatial datasets of carbonate and nutrients conditions available for these reefs, which can provide a baseline definition of extant conditions. Here we provide observational data from four different sites in the northeast Atlantic that are known habitats for CWC. These habitats differ by depth and by the nature of the coral habitat. At depths where CWC are known to occur across these sites the dissolved inorganic carbon ranged from 2088 to 2186 μmol kg(-1), alkalinity ranged from 2299 to 2346 μmol kg(-1), and aragonite Ω ranged from 1.35 to 2.44. At two sites fine-scale hydrodynamics caused increased variability in the carbonate and nutrient conditions over daily time-scales. The observed high level of variability must be taken into account when assessing CWC sensitivities to future environmental change.

  18. Patterns of bacteria-host associations suggest different ecological strategies between two reef building cold-water coral species

    Science.gov (United States)

    Meistertzheim, Anne.-Leila; Lartaud, Franck; Arnaud-Haond, Sophie; Kalenitchenko, Dimitri; Bessalam, Manon; Le Bris, Nadine; Galand, Pierre E.

    2016-08-01

    Cold-water corals (CWC) are main ecosystem engineers of the deep sea, and their reefs constitute hot-spots of biodiversity. However, their ecology remains poorly understood, particularly, the nature of the holobiont formed by corals with their associated bacterial communities. Here, we analyzed Madrepora oculata and Lophelia pertusa samples, collected from one location in a Mediterranean canyon in two different seasons (autumn and spring), in order to test for species specificity and temporal stability of the host-bacteria associations. The 16S rRNA sequencing revealed host-specific patterns of bacterial communities associated with L. pertusa and M. oculata, both in terms of community composition and diversity. All analyzed M. oculata polyps exhibited temporally and spatially similar bacterial communities dominated by haplotypes homologous to the known cnidarians-associated genus Endozoicomonas. In contrast, the bacterial communities associated with L. pertusa varied among polyps from the same colony, as well as among distinct colonies and between seasons. While the resilient consortium formed by M. oculata and its bacterial community fit the definition of holobiont, the versatility of the L. pertusa microbiome suggests that this association is more influenced by the environmental conditions or nutritional status. Our results thus highlight distinct host/microbes association strategies for these two closely related Scleractinians sharing the same habitat, suggesting distinct sensitivity to environmental change.

  19. Fine-scale nutrient and carbonate system dynamics around cold-water coral reefs in the northeast Atlantic

    Science.gov (United States)

    Findlay, Helen S.; Hennige, Sebastian J.; Wicks, Laura C.; Navas, Juan Moreno; Woodward, E. Malcolm S.; Roberts, J. Murray

    2014-01-01

    Ocean acidification has been suggested as a serious threat to the future existence of cold-water corals (CWC). However, there are few fine-scale temporal and spatial datasets of carbonate and nutrients conditions available for these reefs, which can provide a baseline definition of extant conditions. Here we provide observational data from four different sites in the northeast Atlantic that are known habitats for CWC. These habitats differ by depth and by the nature of the coral habitat. At depths where CWC are known to occur across these sites the dissolved inorganic carbon ranged from 2088 to 2186 μmol kg-1, alkalinity ranged from 2299 to 2346 μmol kg-1, and aragonite Ω ranged from 1.35 to 2.44. At two sites fine-scale hydrodynamics caused increased variability in the carbonate and nutrient conditions over daily time-scales. The observed high level of variability must be taken into account when assessing CWC sensitivities to future environmental change.

  20. Coral reefs on the edge? Carbon chemistry on inshore reefs of the great barrier reef.

    Science.gov (United States)

    Uthicke, Sven; Furnas, Miles; Lønborg, Christian

    2014-01-01

    While increasing atmospheric carbon dioxide (CO2) concentration alters global water chemistry (Ocean Acidification; OA), the degree of changes vary on local and regional spatial scales. Inshore fringing coral reefs of the Great Barrier Reef (GBR) are subjected to a variety of local pressures, and some sites may already be marginal habitats for corals. The spatial and temporal variation in directly measured parameters: Total Alkalinity (TA) and dissolved inorganic carbon (DIC) concentration, and derived parameters: partial pressure of CO2 (pCO2); pH and aragonite saturation state (Ωar) were measured at 14 inshore reefs over a two year period in the GBR region. Total Alkalinity varied between 2069 and 2364 µmol kg-1 and DIC concentrations ranged from 1846 to 2099 µmol kg-1. This resulted in pCO2 concentrations from 340 to 554 µatm, with higher values during the wet seasons and pCO2 on inshore reefs distinctly above atmospheric values. However, due to temperature effects, Ωar was not further reduced in the wet season. Aragonite saturation on inshore reefs was consistently lower and pCO2 higher than on GBR reefs further offshore. Thermodynamic effects contribute to this, and anthropogenic runoff may also contribute by altering productivity (P), respiration (R) and P/R ratios. Compared to surveys 18 and 30 years ago, pCO2 on GBR mid- and outer-shelf reefs has risen at the same rate as atmospheric values (∼1.7 µatm yr-1) over 30 years. By contrast, values on inshore reefs have increased at 2.5 to 3 times higher rates. Thus, pCO2 levels on inshore reefs have disproportionately increased compared to atmospheric levels. Our study suggests that inshore GBR reefs are more vulnerable to OA and have less buffering capacity compared to offshore reefs. This may be caused by anthropogenically induced trophic changes in the water column and benthos of inshore reefs subjected to land runoff.

  1. Coral reefs on the edge? Carbon chemistry on inshore reefs of the great barrier reef.

    Directory of Open Access Journals (Sweden)

    Sven Uthicke

    Full Text Available While increasing atmospheric carbon dioxide (CO2 concentration alters global water chemistry (Ocean Acidification; OA, the degree of changes vary on local and regional spatial scales. Inshore fringing coral reefs of the Great Barrier Reef (GBR are subjected to a variety of local pressures, and some sites may already be marginal habitats for corals. The spatial and temporal variation in directly measured parameters: Total Alkalinity (TA and dissolved inorganic carbon (DIC concentration, and derived parameters: partial pressure of CO2 (pCO2; pH and aragonite saturation state (Ωar were measured at 14 inshore reefs over a two year period in the GBR region. Total Alkalinity varied between 2069 and 2364 µmol kg-1 and DIC concentrations ranged from 1846 to 2099 µmol kg-1. This resulted in pCO2 concentrations from 340 to 554 µatm, with higher values during the wet seasons and pCO2 on inshore reefs distinctly above atmospheric values. However, due to temperature effects, Ωar was not further reduced in the wet season. Aragonite saturation on inshore reefs was consistently lower and pCO2 higher than on GBR reefs further offshore. Thermodynamic effects contribute to this, and anthropogenic runoff may also contribute by altering productivity (P, respiration (R and P/R ratios. Compared to surveys 18 and 30 years ago, pCO2 on GBR mid- and outer-shelf reefs has risen at the same rate as atmospheric values (∼1.7 µatm yr-1 over 30 years. By contrast, values on inshore reefs have increased at 2.5 to 3 times higher rates. Thus, pCO2 levels on inshore reefs have disproportionately increased compared to atmospheric levels. Our study suggests that inshore GBR reefs are more vulnerable to OA and have less buffering capacity compared to offshore reefs. This may be caused by anthropogenically induced trophic changes in the water column and benthos of inshore reefs subjected to land runoff.

  2. Coral Reefs on the Edge? Carbon Chemistry on Inshore Reefs of the Great Barrier Reef

    Science.gov (United States)

    Uthicke, Sven; Furnas, Miles; Lønborg, Christian

    2014-01-01

    While increasing atmospheric carbon dioxide (CO2) concentration alters global water chemistry (Ocean Acidification; OA), the degree of changes vary on local and regional spatial scales. Inshore fringing coral reefs of the Great Barrier Reef (GBR) are subjected to a variety of local pressures, and some sites may already be marginal habitats for corals. The spatial and temporal variation in directly measured parameters: Total Alkalinity (TA) and dissolved inorganic carbon (DIC) concentration, and derived parameters: partial pressure of CO2 (pCO2); pH and aragonite saturation state (Ωar) were measured at 14 inshore reefs over a two year period in the GBR region. Total Alkalinity varied between 2069 and 2364 µmol kg−1 and DIC concentrations ranged from 1846 to 2099 µmol kg−1. This resulted in pCO2 concentrations from 340 to 554 µatm, with higher values during the wet seasons and pCO2 on inshore reefs distinctly above atmospheric values. However, due to temperature effects, Ωar was not further reduced in the wet season. Aragonite saturation on inshore reefs was consistently lower and pCO2 higher than on GBR reefs further offshore. Thermodynamic effects contribute to this, and anthropogenic runoff may also contribute by altering productivity (P), respiration (R) and P/R ratios. Compared to surveys 18 and 30 years ago, pCO2 on GBR mid- and outer-shelf reefs has risen at the same rate as atmospheric values (∼1.7 µatm yr−1) over 30 years. By contrast, values on inshore reefs have increased at 2.5 to 3 times higher rates. Thus, pCO2 levels on inshore reefs have disproportionately increased compared to atmospheric levels. Our study suggests that inshore GBR reefs are more vulnerable to OA and have less buffering capacity compared to offshore reefs. This may be caused by anthropogenically induced trophic changes in the water column and benthos of inshore reefs subjected to land runoff. PMID:25295864

  3. Sewage pollution: mitigation is key for coral reef stewardship.

    Science.gov (United States)

    Wear, Stephanie L; Thurber, Rebecca Vega

    2015-10-01

    Coral reefs are in decline worldwide, and land-derived sources of pollution, including sewage, are a major force driving that deterioration. This review presents evidence that sewage discharge occurs in waters surrounding at least 104 of 112 reef geographies. Studies often refer to sewage as a single stressor. However, we show that it is more accurately characterized as a multiple stressor. Many of the individual agents found within sewage, specifically freshwater, inorganic nutrients, pathogens, endocrine disrupters, suspended solids, sediments, and heavy metals, can severely impair coral growth and/or reproduction. These components of sewage may interact with each other to create as-yet poorly understood synergisms (e.g., nutrients facilitate pathogen growth), and escalate impacts of other, non-sewage-based stressors. Surprisingly few published studies have examined impacts of sewage in the field, but those that have suggest negative effects on coral reefs. Because sewage discharge proximal to sensitive coral reefs is widespread across the tropics, it is imperative for coral reef-focused institutions to increase investment in threat-abatement strategies for mitigating sewage pollution. © 2015 The Authors. Annals of the New York Academy of Sciences published by Wiley Periodicals Inc. on behalf of The New York Academy of Sciences.

  4. Biological Criteria for Protection of U.S. Coral Reefs.

    Science.gov (United States)

    Coral reef ecosystems are threatened by natural stressors, human activities, and natural stressors exacerbated by human activities. Under the U.S. Clean Water Act, States and Territories may guard against anthropogenic threats by adopting water quality standards based on biologic...

  5. Biological Criteria for Protection of U.S. Coral Reefs.

    Science.gov (United States)

    Coral reef ecosystems are threatened by natural stressors, human activities, and natural stressors exacerbated by human activities. Under the U.S. Clean Water Act, States and Territories may guard against anthropogenic threats by adopting water quality standards based on biologic...

  6. Can we measure beauty? Computational evaluation of coral reef aesthetics

    NARCIS (Netherlands)

    Haas, A.F.; Guibert, M.; Foerschner, A.; Co, T.; Calhoun, S.; George, E.; Hatay, M.; Dinsdale, E.; Sandin, S.A.; Smith, J.E.; Vermeij, M.J.A.; Felts, B.; Dustan, P.; Salamon, P.; Rohwer, F.

    2015-01-01

    The natural beauty of coral reefs attracts millions of tourists worldwide resulting in substantial revenues for the adjoining economies. Although their visual appearance is a pivotal factor attracting humans to coral reefs current monitoring protocols exclusively target biogeochemical parameters,

  7. Calibration of Community-based Coral Reef Monitoring Protocols ...

    African Journals Online (AJOL)

    Keywords: coral reef monitoring, community-based, calibration. Abstract—Coral reef monitoring (CRM) has been recognised as an important management tool and has ..... Pollution Bulletin 40: 537-550. Wilkinson, C., Green, A., Almany, J. &.

  8. Can we measure beauty? Computational evaluation of coral reef aesthetics

    NARCIS (Netherlands)

    Haas, A.F.; Guibert, M.; Foerschner, A.; Co, T.; Calhoun, S.; George, E.; Hatay, M.; Dinsdale, E.; Sandin, S.A.; Smith, J.E.; Vermeij, M.J.A.; Felts, B.; Dustan, P.; Salamon, P.; Rohwer, F.

    2015-01-01

    The natural beauty of coral reefs attracts millions of tourists worldwide resulting in substantial revenues for the adjoining economies. Although their visual appearance is a pivotal factor attracting humans to coral reefs current monitoring protocols exclusively target biogeochemical parameters, ne

  9. Zonation of uplifted pleistocene coral reefs on barbados, west indies.

    Science.gov (United States)

    Mesolella, K J

    1967-05-05

    The coral species composition of uplifted Pleistocene reefs on Barbados is very similar to Recent West Indian reefs. Acropora palmata, Acropora cervicornis, and Montastrea annularis are qtuantitatively the most important of the coral species.

  10. New protection initiatives announced for coral reefs

    Science.gov (United States)

    Showstack, Randy

    Off the coasts of some of the South Pacific's most idyllic-sounding atolls, Austin Bowden-Kerby has seen first-hand the heavy damage to coral reefs from dynamite and cyanide fishing. For instance, while snorkeling near Chuuk, an island in Micronesia, he has observed craters and rubble beds of coral, which locals have told him date to World War II ordnance.A marine biologist and project scientist for the Coral Gardens Initiative of the Foundation for the Peoples of the South Pacific, Bowden-Kerby has also identified what he says are some public health effects related to destroyed coral reefs and their dying fisheries. These problems include protein and vitamin A deficiency and blindness, all of which may—in some instances—be linked to poor nutrition resulting from lower reef fish consumption by islanders, according to Bowden-Kerby.

  11. Resetting predator baselines in coral reef ecosystems

    Science.gov (United States)

    Bradley, Darcy; Conklin, Eric; Papastamatiou, Yannis P.; McCauley, Douglas J.; Pollock, Kydd; Pollock, Amanda; Kendall, Bruce E.; Gaines, Steven D.; Caselle, Jennifer E.

    2017-01-01

    What did coral reef ecosystems look like before human impacts became pervasive? Early efforts to reconstruct baselines resulted in the controversial suggestion that pristine coral reefs have inverted trophic pyramids, with disproportionally large top predator biomass. The validity of the coral reef inverted trophic pyramid has been questioned, but until now, was not resolved empirically. We use data from an eight-year tag-recapture program with spatially explicit, capture-recapture models to re-examine the population size and density of a key top predator at Palmyra atoll, the same location that inspired the idea of inverted trophic biomass pyramids in coral reef ecosystems. Given that animal movement is suspected to have significantly biased early biomass estimates of highly mobile top predators, we focused our reassessment on the most mobile and most abundant predator at Palmyra, the grey reef shark (Carcharhinus amblyrhynchos). We estimated a density of 21.3 (95% CI 17.8, 24.7) grey reef sharks/km2, which is an order of magnitude lower than the estimates that suggested an inverted trophic pyramid. Our results indicate that the trophic structure of an unexploited reef fish community is not inverted, and that even healthy top predator populations may be considerably smaller, and more precarious, than previously thought. PMID:28220895

  12. Forecasting decadal changes in sea surface temperatures and coral bleaching within a Caribbean coral reef

    Science.gov (United States)

    Li, Angang; Reidenbach, Matthew A.

    2014-09-01

    Elevated sea surface temperature (SST) caused by global warming is one of the major threats to coral reefs. While increased SST has been shown to negatively affect the health of coral reefs by increasing rates of coral bleaching, how changes to atmospheric heating impact SST distributions, modified by local flow environments, has been less understood. This study aimed to simulate future water flow patterns and water surface heating in response to increased air temperature within a coral reef system in Bocas del Toro, Panama, located within the Caribbean Sea. Water flow and SST were modeled using the Delft3D-FLOWcomputer simulation package. Locally measured physical parameters, including bathymetry, astronomic tidal forcing, and coral habitat distribution were input into the model and water flow, and SST was simulated over a four-month period under present day, as well as projected warming scenarios in 2020s, 2050s, and 2080s. Changes in SST, and hence the thermal stress to corals, were quantified by degree heating weeks. Results showed that present-day reported bleaching sites were consistent with localized regions of continuous high SST. Regions with highest SST were located within shallow coastal sites adjacent to the mainland or within the interior of the bay, and characterized by low currents with high water retention times. Under projected increases in SSTs, shallow reef areas in low flow regions were found to be hot spots for future bleaching.

  13. Modelling coral reef futures to inform management: can reducing local-scale stressors conserve reefs under climate change?

    Science.gov (United States)

    Gurney, Georgina G; Melbourne-Thomas, Jessica; Geronimo, Rollan C; Aliño, Perry M; Johnson, Craig R

    2013-01-01

    Climate change has emerged as a principal threat to coral reefs, and is expected to exacerbate coral reef degradation caused by more localised stressors. Management of local stressors is widely advocated to bolster coral reef resilience, but the extent to which management of local stressors might affect future trajectories of reef state remains unclear. This is in part because of limited understanding of the cumulative impact of multiple stressors. Models are ideal tools to aid understanding of future reef state under alternative management and climatic scenarios, but to date few have been sufficiently developed to be useful as decision support tools for local management of coral reefs subject to multiple stressors. We used a simulation model of coral reefs to investigate the extent to which the management of local stressors (namely poor water quality and fishing) might influence future reef state under varying climatic scenarios relating to coral bleaching. We parameterised the model for Bolinao, the Philippines, and explored how simulation modelling can be used to provide decision support for local management. We found that management of water quality, and to a lesser extent fishing, can have a significant impact on future reef state, including coral recovery following bleaching-induced mortality. The stressors we examined interacted antagonistically to affect reef state, highlighting the importance of considering the combined impact of multiple stressors rather than considering them individually. Further, by providing explicit guidance for management of Bolinao's reef system, such as which course of management action will most likely to be effective over what time scales and at which sites, we demonstrated the utility of simulation models for supporting management. Aside from providing explicit guidance for management of Bolinao's reef system, our study offers insights which could inform reef management more broadly, as well as general understanding of reef

  14. Modelling coral reef futures to inform management: can reducing local-scale stressors conserve reefs under climate change?

    Directory of Open Access Journals (Sweden)

    Georgina G Gurney

    Full Text Available Climate change has emerged as a principal threat to coral reefs, and is expected to exacerbate coral reef degradation caused by more localised stressors. Management of local stressors is widely advocated to bolster coral reef resilience, but the extent to which management of local stressors might affect future trajectories of reef state remains unclear. This is in part because of limited understanding of the cumulative impact of multiple stressors. Models are ideal tools to aid understanding of future reef state under alternative management and climatic scenarios, but to date few have been sufficiently developed to be useful as decision support tools for local management of coral reefs subject to multiple stressors. We used a simulation model of coral reefs to investigate the extent to which the management of local stressors (namely poor water quality and fishing might influence future reef state under varying climatic scenarios relating to coral bleaching. We parameterised the model for Bolinao, the Philippines, and explored how simulation modelling can be used to provide decision support for local management. We found that management of water quality, and to a lesser extent fishing, can have a significant impact on future reef state, including coral recovery following bleaching-induced mortality. The stressors we examined interacted antagonistically to affect reef state, highlighting the importance of considering the combined impact of multiple stressors rather than considering them individually. Further, by providing explicit guidance for management of Bolinao's reef system, such as which course of management action will most likely to be effective over what time scales and at which sites, we demonstrated the utility of simulation models for supporting management. Aside from providing explicit guidance for management of Bolinao's reef system, our study offers insights which could inform reef management more broadly, as well as general

  15. Impact of Global Warming on Coral Reefs

    Directory of Open Access Journals (Sweden)

    Sirilak CHUMKIEW

    2011-06-01

    Full Text Available In this paper, we review coral reef responses to climate variability and discuss the possible mechanisms by which climate impacts the coral reef ecosystem. Effects of oceanographic variables such as sea temperature, turbulence, salinity, and nutrients on the coral reef are discussed in terms of their influence on coral growth, reproduction, mortality, acclimation and adaptation. Organisms tend to be limited to specific thermal ranges with experimental findings showing that sufficient oxygen supply by ventilation and circulation only occurs within these ranges. Indirect effects of climate change on the food web are also discussed. Further integrative studies are required to improve our knowledge of the processes linking coral reef responses to future climate change scenarios.Graphical abstract► Incidence of coral reef bleaching on a worldwide scale: location of bleaching reports during 1979 - 2010. Maps are from ReefBase, www.reefbase.org: 1, Arabian Gulf (United Arab Emirates, Qatar, Iran; 2, Red Sea; 3, east Africa; 4, southern Africa (Mozambique, South Africa; 5, Madagascar; 6, Mauritius, Reunion; 7, Seychelles; 8, Chagos; 9, Maldives; 10, Sri Lanka/southern India; 11, Andaman Sea (Andamans, Thailand, Malaysia; 12, South China Sea (Vietnam, Paracel Islands; 13, Philippines; 14, Indonesia; 15, western Australia; 16, Great Barrier Reef; 17, Ryukyu Islands; 18, Mariana Islands; 19, Palau; 20, Papua New Guinea, Vanuatu; 21, Fiji; 22, Samoa; 23, French Polynesia (including Moorea; 24, Hawaiian Islands; 25, Easter Island; 26, Galapagos Islands; 27, equatorial eastern Pacific (Costa Rica, Cocos Island, Panama´, Colombia, Ecuador; 28, subtropical eastern Pacific (Mexico; 29, Mesoamerican reef system (Mexico, Belize, Honduras, Nicaragua; 30, Greater Antilles (Cuba, Haiti, Dominican Republic, Puerto Rico, Virgin Islands; 31, Bahamas, Florida; 32, Bermuda; 33, Lesser Antilles; 34, Curaçao, Aruba, Bonaire, Los Roques; 35, Brazil.

  16. Palmyra Atoll coral reef habitat mapping completion report

    OpenAIRE

    2010-01-01

    The United States Coral Reef Task Force (USCRTF) was established in 1998 by Presidential Executive Order 13089 to lead U.S. efforts to preserve and protect coral reef ecosystems. Current, accurate, and consistent maps greatly enhance efforts to preserve and manage coral reef ecosystems. With comprehensive maps and habitat assessments, coral reef managers can be more effective in designing and implementing a variety of conservation measures, including: • Long-term monitoring programs with ...

  17. The functioning of coral reef communities along environmental gradients

    OpenAIRE

    Plass-Johnson, Jeremiah

    2015-01-01

    One of the primary challenges in ecology is to understand how environmental disturbance affects diversity and community structure, and what are the subsequent consequences on ecosystem functioning. Coral reefs are some of the most diverse ecosystems on the planet resulting in complex sets of interactions between benthic, habitat-forming constituents and mobile fish consumers. However, scleractinian corals, the primary habitat engineers, are dependent on high-light, low-nutrient water conditio...

  18. Coral Reef Protection Implementation Plan

    Science.gov (United States)

    2007-11-02

    ecosystems. These reports Caribbean, Gulf of Mexico , and Pacific Ocean." For the will also serve as an awareness tool for agencies to purposes of this report...alternatives for proposed discharges of - 7 dredged or fill material into U.S or international waters, *o SECTION THi- zEE EXISTING FUNDING SOURCES FOR CORAL...facilities on several thousand acres within the Ko’olaupoko Region on O’ahu. Popu- NORTHERN GULF OF MEXICO lation growth and development throughout

  19. Coral reefs under rapid climate change and ocean acidification.

    Science.gov (United States)

    Hoegh-Guldberg, O; Mumby, P J; Hooten, A J; Steneck, R S; Greenfield, P; Gomez, E; Harvell, C D; Sale, P F; Edwards, A J; Caldeira, K; Knowlton, N; Eakin, C M; Iglesias-Prieto, R; Muthiga, N; Bradbury, R H; Dubi, A; Hatziolos, M E

    2007-12-14

    Atmospheric carbon dioxide concentration is expected to exceed 500 parts per million and global temperatures to rise by at least 2 degrees C by 2050 to 2100, values that significantly exceed those of at least the past 420,000 years during which most extant marine organisms evolved. Under conditions expected in the 21st century, global warming and ocean acidification will compromise carbonate accretion, with corals becoming increasingly rare on reef systems. The result will be less diverse reef communities and carbonate reef structures that fail to be maintained. Climate change also exacerbates local stresses from declining water quality and overexploitation of key species, driving reefs increasingly toward the tipping point for functional collapse. This review presents future scenarios for coral reefs that predict increasingly serious consequences for reef-associated fisheries, tourism, coastal protection, and people. As the International Year of the Reef 2008 begins, scaled-up management intervention and decisive action on global emissions are required if the loss of coral-dominated ecosystems is to be avoided.

  20. Modern coral reefs of western Atlantic: new geological perspective

    Energy Technology Data Exchange (ETDEWEB)

    MacIntyre, I.G.

    1988-11-01

    Contrary to popular belief of the late 1960s, western Atlantic Holocene reefs have a long history and are not feeble novice nearshore veneers that barely survived postglacial temperatures. Rather, the growth of these reefs kept pace with the rising seas of the Holocene transgression and their development was, for the most part, controlled by offshore wave-energy conditions and the relationship between changing sea levels and local shelf topography. Thus, the outer shelves of the eastern Caribbean in areas of high energy have relict reefs consisting predominantly of Acropora palmata, a robust shallow-water coral. The flooding of adjacent shelves during the postglacial transgression introduced stress conditions that terminated the growth of these reefs. When, about 7000 yr ago, shelf-water conditions improved, scattered deeper water coral communities reestablished themselves on these stranded shelf-edge reefs, and fringing and bank-barrier reefs began to flourish in shallow coastal areas. At the same time, the fragile and rapidly growing Acropora cervicornis and other corals flourished at greater depths on the more protected shelves of the western Caribbean and the Gulf of Mexico. As a result, late Holocene buildups more than 30 m thick developed in those areas. 7 figures.

  1. Coral Reefs: A Gallery Program, Grades 7-12.

    Science.gov (United States)

    National Aquarium in Baltimore, MD. Dept. of Education.

    Gallery classes at the National Aquarium in Baltimore give the opportunity to study specific aquarium exhibits which demonstrate entire natural habitats. The coral reef gallery class features the gigantic western Atlantic coral reef (325,000 gallons) with over 1,000 fish. The exhibit simulates a typical Caribbean coral reef and nearby sandy…

  2. Coral Reefs: A Gallery Program, Grades 7-12.

    Science.gov (United States)

    National Aquarium in Baltimore, MD. Dept. of Education.

    Gallery classes at the National Aquarium in Baltimore give the opportunity to study specific aquarium exhibits which demonstrate entire natural habitats. The coral reef gallery class features the gigantic western Atlantic coral reef (325,000 gallons) with over 1,000 fish. The exhibit simulates a typical Caribbean coral reef and nearby sandy…

  3. A Fundamental Paradigm for Coral Reef Carbonate Sediment Dissolution

    Directory of Open Access Journals (Sweden)

    Andreas J Andersson

    2015-07-01

    Full Text Available The long-term success of coral reefs depends on a positive balance of calcium carbonate production exceeding dissolution, erosion, and material export. As a result of ocean acidification, coral reefs could transition from net accretion to net erosion owing to decreasing rates of calcification and increasing rates of chemical dissolution and bioerosion. Here, I present a fundamental paradigm that aims to explain the main driver of carbonate sediment dissolution on coral reefs based on theory and a new empirical dataset of pore water carbonate chemistry from the Bermuda coral reef platform. The paradigm shows that carbonate sediment dissolution is most strongly controlled by the extent of organic matter decomposition in the sediments, but that the magnitude of dissolution is influenced by how much decomposition is required to reach pore water undersaturation with respect to the most soluble bulk carbonate mineral phase present in the sediments, a condition defined as the Carbonate Critical Threshold (CCT. Decomposition of organic matter beyond the CCT under aerobic conditions results in stoichiometric proportional dissolution of carbonate sediments. As ocean acidification proceeds over the next several decades, the extent of organic matter decomposition required to reach the CCT will decrease, carbonate dissolution will increase, and subsequently the accumulation of carbonate sediments will decrease. Since drastic reductions in anthropogenic CO2 emission are unlikely in the foreseeable future, the paradigm shows that active controls and reduction of organic matter input to coral reefs at the local scale might be an effective mitigation strategy to prevent or delay coral reefs transitioning to a state of net dissolution.

  4. Clues to Coral Reef Ecosystem Health: Spectral Analysis Coupled with Radiative Transfer Modeling

    Science.gov (United States)

    Guild, L.; Ganapol, B.; Kramer, P.; Armstrong, R.; Gleason, A.; Torres, J.; Johnson, L.; Garfield, N.

    2003-12-01

    Coral reefs are among the world's most productive and biologically rich ecosystems and are some of the oldest ecosystems on Earth. Coralline structures protect coastlines from storms, maintain high diversity of marine life, and provide nurseries for marine species. Coral reefs play a role in carbon cycling through high rates of organic carbon metabolism and calcification. Coral reefs provide fisheries habitat that are the sole protein source for humans on remote islands. Reefs respond immediately to environmental change and therefore are considered "canaries" of the oceans. However, the world's reefs are in peril: they have shrunk 10-50% from their historical extent due to climate change and anthropogenic activity. An important contribution to coral reef research is improved spectral distinction of reef species' health where anthropogenic activity and climate change impacts are high. Relatively little is known concerning the spectral properties of coral or how coral structures reflect and transmit light. New insights into optical processes of corals under stressed conditions can lead to improved interpretation of airborne and satellite data and forecasting of immediate or long-term impacts of events such as bleaching and disease in coral. We are investigating the spatial and spectral resolution required to detect remotely changes in reef health by coupling spectral analysis of in situ spectra and airborne spectral data with a new radiative transfer model called CorMOD2. Challenges include light attenuation by the water column, atmospheric scattering, and scattering caused by the coral themselves that confound the spectral signal. In CorMOD2, input coral reflectance measurements produce modeled absorption through an inversion at each visible wavelength. The first model development phase of CorMOD2 imposes a scattering baseline that is constant regardless of coral condition, and further specifies that coral is optically thick. Evolution of CorMOD2 is towards a coral

  5. Developing a Biological Condition Gradient for the Protection of Puerto Rico's Coral Reefs

    Science.gov (United States)

    We introduce the application of the Biological Condition Gradient (BCG) to coral reefs: a conceptual model that describes how biological attributes of coral reef ecosystems might change along a gradient of increasing anthropogenic stress. Under authority of the Clean Water Act, t...

  6. Developing a Biological Condition Gradient for the Protection of Puerto Rico's Coral Reefs

    Science.gov (United States)

    We introduce the application of the Biological Condition Gradient (BCG) to coral reefs: a conceptual model that describes how biological attributes of coral reef ecosystems might change along a gradient of increasing anthropogenic stress. Under authority of the Clean Water Act, t...

  7. Coral reef evolution on rapidly subsiding margins

    Science.gov (United States)

    Webster, J.M.; Braga, J.C.; Clague, D.A.; Gallup, C.; Hein, J.R.; Potts, D.C.; Renema, W.; Riding, R.; Riker-Coleman, K.; Silver, E.; Wallace, L.M.

    2009-01-01

    A series of well-developed submerged coral reefs are preserved in the Huon Gulf (Papua New Guinea) and around Hawaii. Despite different tectonics settings, both regions have experienced rapid subsidence (2-6??m/ka) over the last 500??ka. Rapid subsidence, combined with eustatic sea-level changes, is responsible for repeated drowning and backstepping of coral reefs over this period. Because we can place quantitative constraints on these systems (i.e., reef drowning age, eustatic sea-level changes, subsidence rates, accretion rates, basement substrates, and paleobathymetry), these areas represent unique natural laboratories for exploring the roles of tectonics, reef accretion, and eustatic sea-level changes in controlling the evolution of individual reefs, as well as backstepping of the entire system. A review of new and existing bathymetric, radiometric, sedimentary facies and numerical modeling data indicate that these reefs have had long, complex growth histories and that they are highly sensitive, recording drowning not only during major deglaciations, but also during high-frequency, small-amplitude interstadial and deglacial meltwater pulse events. Analysis of five generalized sedimentary facies shows that reef drowning is characterized by a distinct biological and sedimentary sequence. Observational and numerical modeling data indicate that on precessional (20??ka) and sub-orbital timescales, the rate and amplitude of eustatic sea-level changes are critical in controlling initiation, growth, drowning or sub-aerial exposure, subsequent re-initiation, and final drowning. However, over longer timescales (> 100-500??ka) continued tectonic subsidence and basement substrate morphology influence broad scale reef morphology and backstepping geometries. Drilling of these reefs will yield greatly expanded stratigraphic sections compared with similar reefs on slowly subsiding, stable and uplifting margins, and thus they represent a unique archive of sea-level and climate

  8. Suitable environmental ranges for potential coral reef habitats in the tropical ocean.

    Science.gov (United States)

    Guan, Yi; Hohn, Sönke; Merico, Agostino

    2015-01-01

    Coral reefs are found within a limited range of environmental conditions or tolerance limits. Estimating these limits is a critical prerequisite for understanding the impacts of climate change on the biogeography of coral reefs. Here we used the diagnostic model ReefHab to determine the current environmental tolerance limits for coral reefs and the global distribution of potential coral reef habitats as a function of six factors: temperature, salinity, nitrate, phosphate, aragonite saturation state, and light. To determine these tolerance limits, we extracted maximum and minimum values of all environmental variables in corresponding locations where coral reefs are present. We found that the global, annually averaged tolerance limits for coral reefs are 21.7-29.6 °C for temperature, 28.7-40.4 psu for salinity, 4.51 μmol L-1 for nitrate, 0.63 μmol L-1 for phosphate, and 2.82 for aragonite saturation state. The averaged minimum light intensity in coral reefs is 450 μmol photons m-2 s-1. The global area of potential reef habitats calculated by the model is 330.5 × 103 km2. Compared with previous studies, the tolerance limits for temperature, salinity, and nutrients have not changed much, whereas the minimum value of aragonite saturation in coral reef waters has decreased from 3.28 to 2.82. The potential reef habitat area calculated with ReefHab is about 121×103 km2 larger than the area estimated from the charted reefs, suggesting that the growth potential of coral reefs is higher than currently observed.

  9. Coral larvae move toward reef sounds.

    Directory of Open Access Journals (Sweden)

    Mark J A Vermeij

    Full Text Available Free-swimming larvae of tropical corals go through a critical life-phase when they return from the open ocean to select a suitable settlement substrate. During the planktonic phase of their life cycle, the behaviours of small coral larvae (<1 mm that influence settlement success are difficult to observe in situ and are therefore largely unknown. Here, we show that coral larvae respond to acoustic cues that may facilitate detection of habitat from large distances and from upcurrent of preferred settlement locations. Using in situ choice chambers, we found that settling coral larvae were attracted to reef sounds, produced mainly by fish and crustaceans, which we broadcast underwater using loudspeakers. Our discovery that coral larvae can detect and respond to sound is the first description of an auditory response in the invertebrate phylum Cnidaria, which includes jellyfish, anemones, and hydroids as well as corals. If, like settlement-stage reef fish and crustaceans, coral larvae use reef noise as a cue for orientation, the alleviation of noise pollution in the marine environment may gain further urgency.

  10. Sponge diversity and community composition in Irish bathyal coral reefs

    NARCIS (Netherlands)

    Soest, van R.W.M; Cleary, D.F.R.; Kluijver, de M.J.; Lavaleye, M.S.S.; Maier, C.; Duy, van F.C.

    2007-01-01

    Sponge diversity and community composition in bathyal cold water coral reefs (CWRs) were examined at 500-900 m depth on the southeastern slopes of Rockall Bank and the northwestern slope of Porcupine Bank, to the west of Ireland in 2004 and 2005 with boxcores. A total of 104 boxcore samples, supplem

  11. Impact of mass coral bleaching on reef fish community and fishermen catches at Sabang, Aceh Province, Indonesia

    OpenAIRE

    Edi Rudi; Taufiq Iskandar; Nur Fadli; Hidayati Hidayati

    2012-01-01

    Mass coral bleaching was observed at Sabang, Aceh in early 2010, and approximately 60% ofhard coral in waters surrounding Sabang died post-event. Coral mortality was expected to affect thecomposition of reef fish due to decrease its function such as providing a shelter, feeding and spawninggrounds for fish and other marine organisms. The objectives of this research were to evaluate the impactof coral bleaching on coral reef fish community and to compare the composition of fishermen catchesbef...

  12. Impact of mass coral bleaching on reef fish community and fishermen catches at Sabang, Aceh Province, Indonesia

    OpenAIRE

    Edi Rudi; Taufiq Iskandar; Nur Fadli; Hidayati Hidayati

    2012-01-01

    Mass coral bleaching was observed at Sabang, Aceh in early 2010, and approximately 60% ofhard coral in waters surrounding Sabang died post-event. Coral mortality was expected to affect thecomposition of reef fish due to decrease its function such as providing a shelter, feeding and spawninggrounds for fish and other marine organisms. The objectives of this research were to evaluate the impactof coral bleaching on coral reef fish community and to compare the composition of fishermen catchesbef...

  13. Spatial and temporal variations in coral growth on an inshore turbid reef subjected to multiple disturbances.

    Science.gov (United States)

    Browne, N K

    2012-06-01

    Coral growth rates (linear extension, density, calcification rates) of three fast-growing corals (Acropora, Montipora, Turbinaria) were studied in situ on Middle Reef, an inshore reef located on the central Great Barrier Reef (GBR), to assess the influence of changing environmental conditions on coral condition and reef growth. Middle Reef is subjected to both local (e.g. high sediment loads) and global (e.g. coral bleaching) disturbance events, usually associated with reduced coral growth. Results indicated, however, that Acropora growth rates (mean linear extension = 6.3 cm/year) were comparable to those measured at similar depths on offshore reefs on the GBR. Montipora linear extension (2.9 cm/year) was greater than estimates available from both clear-water and turbid reefs, and Turbinaria's dense skeleton (1.3 g/cm(3)) may be more resilient to physical damage as ocean pH falls. Coral growth was found to vary between reef habitats due to spatial differences in water motion and sediment dynamics, and temporally with lower calcification rates during the summer months when SSTs (monthly average 29 °C) and rainfall (monthly total >500 mm) were high. In summary, corals on Middle Reef are robust and resilient to their marginal environmental conditions, but are susceptible to anthropogenic disturbances during the summer months.

  14. Observations of wave transformation over a fringing coral reef and the importance of low-frequency waves and offshore water levels to runup, overwash, and coastal flooding

    Science.gov (United States)

    Cheriton, Olivia M.; Storlazzi, Curt D.; Rosenberger, Kurt J.

    2016-05-01

    Many low-lying tropical islands are susceptible to sea level rise and often subjected to overwash and flooding during large wave events. To quantify wave dynamics and wave-driven water levels on fringing coral reefs, a 5 month deployment of wave gauges and a current meter was conducted across two shore-normal transects on Roi-Namur Island in the Republic of the Marshall Islands. These observations captured two large wave events that had waves with maximum heights greater than 6 m with peak periods of 16 s over the fore reef. The larger event coincided with a peak spring tide, leading to energetic, highly skewed infragravity (0.04-0.004 Hz) and very low frequency (0.004-0.001 Hz) waves at the shoreline, which reached heights of 1.0 and 0.7 m, respectively. Water surface elevations, combined with wave runup, reached 3.7 m above the reef bed at the innermost reef flat adjacent to the toe of the beach, resulting in flooding of inland areas. This overwash occurred during a 3 h time window that coincided with high tide and maximum low-frequency reef flat wave heights. The relatively low-relief characteristics of this narrow reef flat may further drive shoreline amplification of low-frequency waves due to resonance modes. These results (1) demonstrate how the coupling of high offshore water levels with low-frequency reef flat wave energetics can lead to large impacts along fringing reef-lined shorelines, such as island overwash, and (2) lend support to the hypothesis that predicted higher sea levels will lead to more frequent occurrences of these extreme events, negatively impacting coastal resources and infrastructure.

  15. Observations of wave transformation over a fringing coral reef and the importance of low-frequency waves and offshore water levels to runup, overwash, and coastal flooding

    Science.gov (United States)

    Cheriton, Olivia; Storlazzi, Curt; Rosenberger, Kurt

    2016-01-01

    Many low-lying tropical islands are susceptible to sea level rise and often subjected to overwash and flooding during large wave events. To quantify wave dynamics and wave-driven water levels on fringing coral reefs, a 5 month deployment of wave gauges and a current meter was conducted across two shore-normal transects on Roi-Namur Island in the Republic of the Marshall Islands. These observations captured two large wave events that had waves with maximum heights greater than 6 m with peak periods of 16 s over the fore reef. The larger event coincided with a peak spring tide, leading to energetic, highly skewed infragravity (0.04–0.004 Hz) and very low frequency (0.004–0.001 Hz) waves at the shoreline, which reached heights of 1.0 and 0.7 m, respectively. Water surface elevations, combined with wave runup, reached 3.7 m above the reef bed at the innermost reef flat adjacent to the toe of the beach, resulting in flooding of inland areas. This overwash occurred during a 3 h time window that coincided with high tide and maximum low-frequency reef flat wave heights. The relatively low-relief characteristics of this narrow reef flat may further drive shoreline amplification of low-frequency waves due to resonance modes. These results (1) demonstrate how the coupling of high offshore water levels with low-frequency reef flat wave energetics can lead to large impacts along fringing reef-lined shorelines, such as island overwash, and (2) lend support to the hypothesis that predicted higher sea levels will lead to more frequent occurrences of these extreme events, negatively impacting coastal resources and infrastructure.

  16. Coral reef surveys in India

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.

    with those practiced elsewhere. With these objectives, diversification of observations to include various reef responses both at community level and at organism level have just begun and may eventually be continued to integrate with global reef monitoring...

  17. Oxygen consumption by a coral reef sponge.

    Science.gov (United States)

    Hadas, Eran; Ilan, Micha; Shpigel, Muki

    2008-07-01

    Oxygen consumption of the Red Sea coral reef sponge Negombata magnifica was measured using both incubation and steady-state methods. The latter method was found to be the more reliable because sponge activity remained stable over time. Oxygen consumption rate was measured during three levels of sponge activity: full activity, reduced activity and basal activity (starved). It was found that the active oxygen consumption rate of N. magnifica averaged 37.3+/-4.6 nmol O2 min(-1) g(-1) wet mass, which is within the upper range reported for other tropical marine sponges. Fully active N. magnifica individuals consumed an average of 41.8+/-3.2 nmol O2 min(-1) g(-1) wet mass. The mean basal respiration rate was 20.2+/-1.2 nmol O2 min(-1) g(-1) wet mass, which is 51.6+/-2.5% of the active respiration rate. Therefore, the oxygen used for water pumping was calculated to be at most 10.6+/-1.8 nmol O2 min(-1) g(-1) wet mass, which is 25.1+/-3.6% of the total respiration. Combined oxygen used for maintenance and water pumping activity was calculated to be 30.8 nmol O2 min(-1) g(-1) wet mass, which is approximately 74% of the sponge's total oxygen requirement. The remaining oxygen is directed to other physiological activities, mainly the energy requirement of growth. These findings suggest that only a relatively minor amount of energy is potentially available for growth, and thus might be a factor in controlling the growth rate of N. magnifica in oligotrophic coral reefs.

  18. NOAA's Coral Reef Conservation Program: Coral Reef Habitat Mapping Projects in 2016

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Maps are a critical cornerstone of coral reef management, research and planning, with direct links to management needs in a number of forms. To accurately...

  19. Coral Reefs: An English Compilation of Activities for Middle School Students.

    Science.gov (United States)

    Walker, Sharon H.; Newton, R. Amanda; Ortiz, Alida

    This activity book on coral reefs for middle school students is divided into 10 sections. Section 1 contains the introduction. Section 2 describes what coral reefs are while section 3 describes how coral reefs reproduce and grow. Section 4 discusses where coral reefs are found and section 5 describes life on a coral reef. Section 6 discusses the…

  20. Determining the extent and characterizing coral reef habitats of the northern latitudes of the Florida Reef Tract (Martin County).

    Science.gov (United States)

    Walker, Brian K; Gilliam, David S

    2013-01-01

    Climate change has recently been implicated in poleward shifts of many tropical species including corals; thus attention focused on higher-latitude coral communities is warranted to investigate possible range expansions and ecosystem shifts due to global warming. As the northern extension of the Florida Reef Tract (FRT), the third-largest barrier reef ecosystem in the world, southeast Florida (25-27° N latitude) is a prime region to study such effects. Most of the shallow-water FRT benthic habitats have been mapped, however minimal data and limited knowledge exist about the coral reef communities of its northernmost reaches off Martin County. First benthic habitat mapping was conducted using newly acquired high resolution LIDAR bathymetry and aerial photography where possible to map the spatial extent of coral reef habitats. Quantitative data were collected to characterize benthic cover and stony coral demographics and a comprehensive accuracy assessment was performed. The data were then analyzed in a habitat biogeography context to determine if a new coral reef ecosystem region designation was warranted. Of the 374 km(2) seafloor mapped, 95.2% was Sand, 4.1% was Coral Reef and Colonized Pavement, and 0.7% was Other Delineations. Map accuracy assessment yielded an overall accuracy of 94.9% once adjusted for known map marginal proportions. Cluster analysis of cross-shelf habitat type and widths indicated that the benthic habitats were different than those further south and warranted designation of a new coral reef ecosystem region. Unlike the FRT further south, coral communities were dominated by cold-water tolerant species and LIDAR morphology indicated no evidence of historic reef growth during warmer climates. Present-day hydrographic conditions may be inhibiting poleward expansion of coral communities along Florida. This study provides new information on the benthic community composition of the northern FRT, serving as a baseline for future community shift and

  1. Determining the extent and characterizing coral reef habitats of the northern latitudes of the Florida Reef Tract (Martin County.

    Directory of Open Access Journals (Sweden)

    Brian K Walker

    Full Text Available Climate change has recently been implicated in poleward shifts of many tropical species including corals; thus attention focused on higher-latitude coral communities is warranted to investigate possible range expansions and ecosystem shifts due to global warming. As the northern extension of the Florida Reef Tract (FRT, the third-largest barrier reef ecosystem in the world, southeast Florida (25-27° N latitude is a prime region to study such effects. Most of the shallow-water FRT benthic habitats have been mapped, however minimal data and limited knowledge exist about the coral reef communities of its northernmost reaches off Martin County. First benthic habitat mapping was conducted using newly acquired high resolution LIDAR bathymetry and aerial photography where possible to map the spatial extent of coral reef habitats. Quantitative data were collected to characterize benthic cover and stony coral demographics and a comprehensive accuracy assessment was performed. The data were then analyzed in a habitat biogeography context to determine if a new coral reef ecosystem region designation was warranted. Of the 374 km(2 seafloor mapped, 95.2% was Sand, 4.1% was Coral Reef and Colonized Pavement, and 0.7% was Other Delineations. Map accuracy assessment yielded an overall accuracy of 94.9% once adjusted for known map marginal proportions. Cluster analysis of cross-shelf habitat type and widths indicated that the benthic habitats were different than those further south and warranted designation of a new coral reef ecosystem region. Unlike the FRT further south, coral communities were dominated by cold-water tolerant species and LIDAR morphology indicated no evidence of historic reef growth during warmer climates. Present-day hydrographic conditions may be inhibiting poleward expansion of coral communities along Florida. This study provides new information on the benthic community composition of the northern FRT, serving as a baseline for future

  2. Two new species of the genus Anisomysis (Anisomysis) (Crustacea, Mysida, Mysidae) from coral reef waters in Thailand

    Science.gov (United States)

    Moriya, Mitsuyasu; Srinui, Khwanruan; Sawamoto, Shozo

    2015-01-01

    Abstract Two new species of Anisomysis Hansen, 1910 (Mysida, Mysidae), Anisomysis (Anisomysis) spinaintus sp. n. and Anisomysis (Anisomysis) phuketensis sp. n., from coral-reef waters in Thailand are described. Anisomysis (Anisomysis) spinaintus, collected in the Chaolao Beach, Chanthaburi Province, is distinguished from the closely allied species Anisomysis (Anisomysis) incisa Tattersall, 1936, and Anisomysis (Anisomysis) hawaiiensis Murano, 1995, by the presence of 6–9 spines on the apical cleft of telson, which are absent in the latter two allied species. The new species can also be distinguished from Anisomysis (Anisomysis) aikawai Ii, 1964, by the presence of a deep telson cleft and a large number of spines on the lateral margin of telson. Anisomysis (Anisomysis) phuketensis sp. n., collected in Ko Lon, Phuket, is distinguished from the allied species Anisomysis (Anisomysis) robustispina Panampunnayil, 1984, by having a short telson and a pair of long spines on the apical part of the telson. Keys to the subgenera and species of Anisomysis, including the two new species, are presented. PMID:26487820

  3. Coral diseases and bleaching on Colombian Caribbean coral reefs

    Directory of Open Access Journals (Sweden)

    Raúl Navas-Camacho

    2010-05-01

    Full Text Available Since 1998 the National Monitoring System for the Coral Reefs of Colombia (SIMAC has monitored the occurrence of coral bleaching and diseases in some Colombian coral reefs (permanent stations at San Andres Island, Rosario Islands, Tayrona, San Bernardo Islands and Urabá. The main purpose is to evaluate their health status and to understand the factors that have been contributing to their decline. To estimate these occurrences, annual surveys in 126 permanent belt transects (10x2m with different depth intervals (3-6 meters, 9-12 meters and 15-18 meters are performed at all reef sites. Data from the 1998-2004 period, revealed that San Andrés Island had many colonies with diseases (38.9 colonies/m2, and Urabá had high numbers with bleaching (54.4 colonies/m2. Of the seven reported coral diseases studied, Dark Spots Disease (DSD, and White Plague Disease (WPD were noteworthy because they occurred in all Caribbean monitored sites, and because of their high interannual infection incidence. Thirty five species of scleractinian corals were affected by at least one disease and a high incidence of coral diseases on the main reef builders is documented. Bleaching was present in 34 species. During the whole monitoring period, Agaricia agaricites and Siderastrea siderea were the species most severely affected by DSD and bleaching, respectively. Diseases on species such as Agaricia fragilis, A.grahamae, A. humilis, Diploria clivosa, Eusmilia fastigiata, Millepora complanata, and Mycetophyllia aliciae are recorded for first time in Colombia. We present bleaching and disease incidences, kinds of diseases, coral species affected, reef localities studied, depth intervals of surveys, and temporal (years variation for each geographic area. This variation makes difficult to clearly determine defined patterns or general trends for monitored reefs. This is the first long-term study of coral diseases and bleaching in the Southwestern Caribbean, and one of the few

  4. Chemotaxis by natural populations of coral reef bacteria.

    Science.gov (United States)

    Tout, Jessica; Jeffries, Thomas C; Petrou, Katherina; Tyson, Gene W; Webster, Nicole S; Garren, Melissa; Stocker, Roman; Ralph, Peter J; Seymour, Justin R

    2015-08-01

    Corals experience intimate associations with distinct populations of marine microorganisms, but the microbial behaviours underpinning these relationships are poorly understood. There is evidence that chemotaxis is pivotal to the infection process of corals by pathogenic bacteria, but this evidence is limited to experiments using cultured isolates under laboratory conditions. We measured the chemotactic capabilities of natural populations of coral-associated bacteria towards chemicals released by corals and their symbionts, including amino acids, carbohydrates, ammonium and dimethylsulfoniopropionate (DMSP). Laboratory experiments, using a modified capillary assay, and in situ measurements, using a novel microfabricated in situ chemotaxis assay, were employed to quantify the chemotactic responses of natural microbial assemblages on the Great Barrier Reef. Both approaches showed that bacteria associated with the surface of the coral species Pocillopora damicornis and Acropora aspera exhibited significant levels of chemotaxis, particularly towards DMSP and amino acids, and that these levels of chemotaxis were significantly higher than that of bacteria inhabiting nearby, non-coral-associated waters. This pattern was supported by a significantly higher abundance of chemotaxis and motility genes in metagenomes within coral-associated water types. The phylogenetic composition of the coral-associated chemotactic microorganisms, determined using 16S rRNA amplicon pyrosequencing, differed from the community in the seawater surrounding the coral and comprised known coral associates, including potentially pathogenic Vibrio species. These findings indicate that motility and chemotaxis are prevalent phenotypes among coral-associated bacteria, and we propose that chemotaxis has an important role in the establishment and maintenance of specific coral-microbe associations, which may ultimately influence the health and stability of the coral holobiont.

  5. Reefs for the future: Resilience of coral reefs in the main Hawaiian Islands

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Declining health of coral reef ecosystems led scientists to search for factors that support reef resilience: the ability of reefs to resist and recover from...

  6. The Global Coral Reef Crisis: Trends and Solutions (Coral Reefs: Values, Threats, and the Marine Aquarium Trade)

    Energy Technology Data Exchange (ETDEWEB)

    Shuman, Craig S. (Reef Check, UCLA)

    2003-02-05

    Second only to tropical rainforests, coral reefs support one of the world's most diverse natural habitats. Over 350 million individuals depend on coral reef resources for food and income. Unfortunately, the Earth is in the midst of a coral reef crisis. Anthropogenic impacts including overfishing, destructive fishing practices, sedimentation and pollution, as well as global climate change, have served to disrupt the natural processes that maintain the health of these ecosystems. Until recently, however, the global extent of the coral reef crisis was unknown. Reef Check was developed in 1996 as a volunteer, community-based monitoring protocol designed to measure the health of coral reefs on a global scale. With goals of education, monitoring, and management, Reef Check has activities in over 60 countries and territories. They have not only provided scientific evidence of the global extent of the coral reef crisis, but have provided the first community based steps to alleviate this urgent situation.

  7. Impact Of Coral Structures On Wave Directional Spreading Across A Shallow Reef Flat - Lizard Island, Northern Great Barrier Reef

    Science.gov (United States)

    Leon, J. X.; Baldock, T.; Callaghan, D. P.; Hoegh-guldberg, O.; Mumby, P.; Phinn, S. R.; Roelfsema, C. M.; Saunders, M. I.

    2013-12-01

    Coral reef hydrodynamics operate at several and overlapping spatial-temporal scales. Waves have the most important forcing function on shallow (stress, directly mixing water (temperature and nutrients) and transporting sediments, nutrients and plankton. Reef flats are very effective at dissipating wave energy and providing an important ecosystem service by protecting highly valued shorelines. The effectiveness of reef flats to dissipate wave energy is related to the extreme hydraulic roughness of the benthos and substrate composition. Hydraulic roughness is usually obtained empirically from frictional-dissipation calculations, as detailed field measurements of bottom roughness (e.g. chain-method or profile gauges) is a very labour and time-consuming task. In this study we measured the impact of coral structures on wave directional spreading. Field data was collected during October 2012 across a reef flat on Lizard Island, northern Great Barrier Reef. Wave surface levels were measured using an array of self-logging pressure sensors. A rapid in situ close-range photogrammetric method was used to create a high-resolution (0.5 cm) image mosaic and digital elevation model. Individual coral heads were extracted from these datasets using geo-morphometric and object-based image analysis techniques. Wave propagation was modelled using a modified version of the SWAN model which includes the measured coral structures in 2m by 1m cells across the reef. The approach followed a cylinder drag approach, neglecting skin friction and inertial components. Testing against field data included bed skin friction. Our results show, for the first time, how the variability of the reef benthos structures affects wave dissipation across a shallow reef flat. This has important implications globally for coral reefs, due to the large extent of their area occupied by reef flats, particularly, as global-scale degradation in coral reef health is causing a lowering of reef carbonate production that

  8. Quantifying water flow within aquatic ecosystems using load cell sensors: a profile of currents experienced by coral reef organisms around Lizard Island, Great Barrier Reef, Australia.

    Science.gov (United States)

    Johansen, Jacob L

    2014-01-01

    Current velocity in aquatic environments has major implications for the diversity, abundance and ecology of aquatic organisms, but quantifying these currents has proven difficult. This study utilises a simple and inexpensive instrument (reef system around Lizard Island (Great Barrier Reef, Australia) at a spatial and temporal scale relevant to the ecology of individual benthos and fish. The instrument uses load-cell sensors to provide a correlation between sensor output and ambient current velocity of 99%. Each instrument is able to continuously record current velocities to >500 cms⁻¹ and wave frequency to >100 Hz over several weeks. Sensor data are registered and processed at 16 MHz and 10 bit resolution, with a measuring precision of 0.06±0.04%, and accuracy of 0.51±0.65% (mean ±S.D.). Each instrument is also pressure rated to 120 m and shear stresses ≤20 kNm⁻² allowing deployment in harsh environments. The instrument was deployed across 27 coral reef sites covering the crest (3 m), mid-slope (6 m) and deep-slope (9 m depth) of habitats directly exposed, oblique or sheltered from prevailing winds. Measurements demonstrate that currents over the reef slope and crest varies immensely depending on depth and exposure: currents differ up to 9-fold within habitats only separated by 3 m depth and 15-fold between exposed, oblique and sheltered habitats. Comparisons to ambient weather conditions reveal that currents around Lizard Island are largely wind driven. Zero to 22.5 knot winds correspond directly to currents of 0 to >82 cms⁻¹, while tidal currents rarely exceed 5.5 cms⁻¹. Rather, current velocity increases exponentially as a function of wave height (0 to 1.6 m) and frequency (0.54 to 0.20 Hz), emphasizing the enormous effect of wind and waves on organisms in these shallow coral reef habitats.

  9. A Global Estimate of the Number of Coral Reef Fishers.

    Directory of Open Access Journals (Sweden)

    Louise S L Teh

    Full Text Available Overfishing threatens coral reefs worldwide, yet there is no reliable estimate on the number of reef fishers globally. We address this data gap by quantifying the number of reef fishers on a global scale, using two approaches - the first estimates reef fishers as a proportion of the total number of marine fishers in a country, based on the ratio of reef-related to total marine fish landed values. The second estimates reef fishers as a function of coral reef area, rural coastal population, and fishing pressure. In total, we find that there are 6 million reef fishers in 99 reef countries and territories worldwide, of which at least 25% are reef gleaners. Our estimates are an improvement over most existing fisher population statistics, which tend to omit accounting for gleaners and reef fishers. Our results suggest that slightly over a quarter of the world's small-scale fishers fish on coral reefs, and half of all coral reef fishers are in Southeast Asia. Coral reefs evidently support the socio-economic well-being of numerous coastal communities. By quantifying the number of people who are employed as reef fishers, we provide decision-makers with an important input into planning for sustainable coral reef fisheries at the appropriate scale.

  10. Maintenance of fish diversity on disturbed coral reefs

    Science.gov (United States)

    Wilson, S. K.; Dolman, A. M.; Cheal, A. J.; Emslie, M. J.; Pratchett, M. S.; Sweatman, H. P. A.

    2009-03-01

    Habitat perturbations play a major role in shaping community structure; however, the elements of disturbance-related habitat change that affect diversity are not always apparent. This study examined the effects of habitat disturbances on species richness of coral reef fish assemblages using annual surveys of habitat and 210 fish species from 10 reefs on the Great Barrier Reef (GBR). Over a period of 11 years, major disturbances, including localised outbreaks of crown-of-thorns sea star ( Acanthaster planci), severe storms or coral bleaching, resulted in coral decline of 46-96% in all the 10 reefs. Despite declines in coral cover, structural complexity of the reef framework was retained on five and species richness of coral reef fishes maintained on nine of the disturbed reefs. Extensive loss of coral resulted in localised declines of highly specialised coral-dependent species, but this loss of diversity was more than compensated for by increases in the number of species that feed on the epilithic algal matrix (EAM). A unimodal relationship between areal coral cover and species richness indicated species richness was greatest at approximately 20% coral cover declining by 3-4 species (6-8% of average richness) at higher and lower coral cover. Results revealed that declines in coral cover on reefs may have limited short-term impact on the diversity of coral reef fishes, though there may be fundamental changes in the community structure of fishes.

  11. Nitrous oxide and methane dynamics in a coral reef lagoon driven by pore water exchange: Insights from automated high-frequency observations

    Science.gov (United States)

    O'Reilly, Chiara; Santos, Isaac R.; Cyronak, Tyler; McMahon, Ashly; Maher, Damien T.

    2015-04-01

    Automated cavity ring down spectroscopy was used to make continuous measurements of dissolved methane, nitrous oxide, and carbon dioxide in a coral reef lagoon for 2 weeks (Heron Island, Great Barrier Reef). Radon (222Rn) was used to trace the influence of tidally driven pore water exchange on greenhouse gas dynamics. Clear tidal variation was observed for CH4, which correlated to 222Rn in lagoon waters. N2O correlated to 222Rn during the day only, which appears to be a response to coupled nitrification-denitrification in oxic sediments, fueled by nitrate derived from bird guano. The lagoon was a net source of CH4 and N2O to the atmosphere and a sink for atmospheric CO2. The estimated pore water-derived CH4 and N2O fluxes were 3.2-fold and 24.0-fold greater than the fluxes to the atmosphere. Overall, pore water and/or groundwater exchange were the only important sources of CH4 and major controls of N2O in the coral reef lagoon.

  12. Contaminants assessment in the coral reefs of Virgin Islands National Park and Virgin Islands Coral Reef National Monument

    Science.gov (United States)

    Bargar, Timothy A.; Garrison, Virginia H.; Alvarez, David A.; Echols, Kathy

    2013-01-01

    Coral, fish, plankton, and detritus samples were collected from coral reefs in Virgin Islands National Park (VIIS) and Virgin Islands Coral Reef National Monument (VICR) to assess existing contamination levels. Passive water sampling using polar organic chemical integrative samplers (POCIS) and semi-permeable membrane devices found a few emerging pollutants of concern (DEET and galaxolide) and polynuclear aromatic hydrocarbons. Very little persistent organic chemical contamination was detected in the tissue or detritus samples. Detected contaminants were at concentrations below those reported to be harmful to aquatic organisms. Extracts from the POCIS were subjected to the yeast estrogen screen (YES) to assess potential estrogenicity of the contaminant mixture. Results of the YES (estrogen equivalency of 0.17–0.31 ng/L 17-β-estradiol) indicated a low estrogenicity likelihood for contaminants extracted from water. Findings point to low levels of polar and non-polar organic contaminants in the bays sampled within VICR and VIIS.

  13. Contaminants assessment in the coral reefs of Virgin Islands National Park and Virgin Islands Coral Reef National Monument.

    Science.gov (United States)

    Bargar, Timothy A; Garrison, Virginia H; Alvarez, David A; Echols, Kathy R

    2013-05-15

    Coral, fish, plankton, and detritus samples were collected from coral reefs in Virgin Islands National Park (VIIS) and Virgin Islands Coral Reef National Monument (VICR) to assess existing contamination levels. Passive water sampling using polar organic chemical integrative samplers (POCIS) and semi-permeable membrane devices found a few emerging pollutants of concern (DEET and galaxolide) and polynuclear aromatic hydrocarbons. Very little persistent organic chemical contamination was detected in the tissue or detritus samples. Detected contaminants were at concentrations below those reported to be harmful to aquatic organisms. Extracts from the POCIS were subjected to the yeast estrogen screen (YES) to assess potential estrogenicity of the contaminant mixture. Results of the YES (estrogen equivalency of 0.17-0.31 ng/L 17-β-estradiol) indicated a low estrogenicity likelihood for contaminants extracted from water. Findings point to low levels of polar and non-polar organic contaminants in the bays sampled within VICR and VIIS. Published by Elsevier Ltd.

  14. Global and local threats to coral reef functioning and existence: review and predictions

    Energy Technology Data Exchange (ETDEWEB)

    Wilkinson, C.R. [Australian Institute of Marine Sciences, Townsville, Qld. (Australia)

    1999-07-01

    Factors causing global degradation of coral reefs are examined briefly as a basis for predicting the likely consequences of increases in these factors. The earlier consensus was that widespread but localized damage from natural factors such as storms, and direct anthropogenic effects such as increased sedimentation, pollution and exploitation, posed the largest immediate threat to coral reefs. Now truly global factors associated with accelerating Global Climate Change are either damaging coral reefs or have the potential to inflict greater damage in the immediate future e.g. increases in coral bleaching and mortality, and reduction in coral calcification due to changes in sea-water chemistry with increasing carbon dioxide concentrations. Rises in sea level will probably disrupt human communities and their cultures by making coral cays uninhabitable, whereas coral reefs will sustain minimal damage from the rise in sea level. The short-term (decades) prognosis is that major reductions are almost certain in the extent and biodiversity of coral reefs, and severe disruptions to cultures and economies dependent on reef resources will occur. The long-term (centuries to millennia) prognosis is more encouraging because coral reefs have remarkable resilience to severe disruption and will probably show this resilience in the future when climate changes either stabilize or reverse.

  15. Coral Reefs and People in a High-CO2 World: Where Can Science Make a Difference to People?

    National Research Council Canada - National Science Library

    Pendleton, Linwood; Comte, Adrien; Langdon, Chris; Ekstrom, Julia A; Cooley, Sarah R; Suatoni, Lisa; Beck, Michael W; Brander, Luke M; Burke, Lauretta; Cinner, Josh E; Doherty, Carolyn; Edwards, Peter E. T; Gledhill, Dwight; Jiang, Li-Qing; van Hooidonk, Ruben J; Teh, Louise; Waldbusser, George G; Ritter, Jessica

    2016-01-01

      Reefs and People at Risk Increasing levels of carbon dioxide in the atmosphere put shallow, warm-water coral reef ecosystems, and the people who depend upon them at risk from two key global environmental stresses: 1...

  16. Fishing down nutrients on coral reefs

    Science.gov (United States)

    Allgeier, Jacob E.; Valdivia, Abel; Cox, Courtney; Layman, Craig A.

    2016-08-01

    Fishing is widely considered a leading cause of biodiversity loss in marine environments, but the potential effect on ecosystem processes, such as nutrient fluxes, is less explored. Here, we test how fishing on Caribbean coral reefs influences biodiversity and ecosystem functions provided by the fish community, that is, fish-mediated nutrient capacity. Specifically, we modelled five processes of nutrient storage (in biomass) and supply (via excretion) of nutrients, as well as a measure of their multifunctionality, onto 143 species of coral reef fishes across 110 coral reef fish communities. These communities span a gradient from extreme fishing pressure to protected areas with little to no fishing. We find that in fished sites fish-mediated nutrient capacity is reduced almost 50%, despite no substantial changes in the number of species. Instead, changes in community size and trophic structure were the primary cause of shifts in ecosystem function. These findings suggest that a broader perspective that incorporates predictable impacts of fishing pressure on ecosystem function is imperative for effective coral reef conservation and management.

  17. The 27-year decline of coral cover on the Great Barrier Reef and its causes.

    Science.gov (United States)

    De'ath, Glenn; Fabricius, Katharina E; Sweatman, Hugh; Puotinen, Marji

    2012-10-30

    The world's coral reefs are being degraded, and the need to reduce local pressures to offset the effects of increasing global pressures is now widely recognized. This study investigates the spatial and temporal dynamics of coral cover, identifies the main drivers of coral mortality, and quantifies the rates of potential recovery of the Great Barrier Reef. Based on the world's most extensive time series data on reef condition (2,258 surveys of 214 reefs over 1985-2012), we show a major decline in coral cover from 28.0% to 13.8% (0.53% y(-1)), a loss of 50.7% of initial coral cover. Tropical cyclones, coral predation by crown-of-thorns starfish (COTS), and coral bleaching accounted for 48%, 42%, and 10% of the respective estimated losses, amounting to 3.38% y(-1) mortality rate. Importantly, the relatively pristine northern region showed no overall decline. The estimated rate of increase in coral cover in the absence of cyclones, COTS, and bleaching was 2.85% y(-1), demonstrating substantial capacity for recovery of reefs. In the absence of COTS, coral cover would increase at 0.89% y(-1), despite ongoing losses due to cyclones and bleaching. Thus, reducing COTS populations, by improving water quality and developing alternative control measures, could prevent further coral decline and improve the outlook for the Great Barrier Reef. Such strategies can, however, only be successful if climatic conditions are stabilized, as losses due to bleaching and cyclones will otherwise increase.

  18. Fitness consequences of habitat variability, trophic position, and energy allocation across the depth distribution of a coral-reef fish

    Science.gov (United States)

    Goldstein, E. D.; D'Alessandro, E. K.; Sponaugle, S.

    2017-09-01

    Environmental clines such as latitude and depth that limit species' distributions may be associated with gradients in habitat suitability that can affect the fitness of an organism. With the global loss of shallow-water photosynthetic coral reefs, mesophotic coral ecosystems ( 30-150 m) may be buffered from some environmental stressors, thereby serving as refuges for a range of organisms including mobile obligate reef dwellers. Yet habitat suitability may be diminished at the depth boundary of photosynthetic coral reefs. We assessed the suitability of coral-reef habitats across the majority of the depth distribution of a common demersal reef fish ( Stegastes partitus) ranging from shallow shelf (SS, reefs are suitable habitats for demersal reef fish and may be important refuges for organisms common on declining shallow coral reefs.

  19. Climate change and coral reef connectivity

    Science.gov (United States)

    Munday, P. L.; Leis, J. M.; Lough, J. M.; Paris, C. B.; Kingsford, M. J.; Berumen, M. L.; Lambrechts, J.

    2009-06-01

    This review assesses and predicts the impacts that rapid climate change will have on population connectivity in coral reef ecosystems, using fishes as a model group. Increased ocean temperatures are expected to accelerate larval development, potentially leading to reduced pelagic durations and earlier reef-seeking behaviour. Depending on the spatial arrangement of reefs, the expectation would be a reduction in dispersal distances and the spatial scale of connectivity. Small increase in temperature might enhance the number of larvae surviving the pelagic phase, but larger increases are likely to reduce reproductive output and increase larval mortality. Changes to ocean currents could alter the dynamics of larval supply and changes to planktonic productivity could affect how many larvae survive the pelagic stage and their condition at settlement; however, these patterns are likely to vary greatly from place-to-place and projections of how oceanographic features will change in the future lack sufficient certainty and resolution to make robust predictions. Connectivity could also be compromised by the increased fragmentation of reef habitat due to the effects of coral bleaching and ocean acidification. Changes to the spatial and temporal scales of connectivity have implications for the management of coral reef ecosystems, especially the design and placement of marine-protected areas. The size and spacing of protected areas may need to be strategically adjusted if reserve networks are to retain their efficacy in the future.

  20. Measuring coral reef community metabolism using new benthic chamber technology

    Science.gov (United States)

    Yates, K.K.; Halley, R.B.

    2003-01-01

    Accurate measurement of coral reef community metabolism is a necessity for process monitoring and in situ experimentation on coral reef health. Traditional methodologies used for these measurements are effective but limited by location and scale constraints. We present field trial results for a new benthic chamber system called the Submersible Habitat for Analyzing Reef Quality (SHARQ). This large, portable incubation system enables in situ measurement and experimentation on community- scale metabolism. Rates of photosynthesis, respiration, and calcification were measured using the SHARQ for a variety of coral reef substrate types on the reef flat of South Molokai, Hawaii, and in Biscayne National Park, Florida. Values for daily gross production, 24-h respiration, and net calcification ranged from 0.26 to 6.45 g O2 m-2 day-1, 1.96 to 8.10 g O2 m-2 24 h-1, and 0.02 to 2.0 g CaCO3 m -2 day-1, respectively, for all substrate types. Field trials indicate that the SHARQ incubation chamber is an effective tool for in situ isolation of a water mass over a variety of benthic substrate types for process monitoring, experimentation, and other applications.

  1. Coral identity underpins architectural complexity on Caribbean reefs.

    Science.gov (United States)

    Alvarez-Filip, Lorenzo; Dulvy, Nicholas K; Côte, Isabelle M; Watkinson, Andrew R; Gill, Jennifer A

    2011-09-01

    The architectural complexity of ecosystems can greatly influence their capacity to support biodiversity and deliver ecosystem services. Understanding the components underlying this complexity can aid the development of effective strategies for ecosystem conservation. Caribbean coral reefs support and protect millions of livelihoods, but recent anthropogenic change is shifting communities toward reefs dominated by stress-resistant coral species, which are often less architecturally complex. With the regionwide decline in reef fish abundance, it is becoming increasingly important to understand changes in coral reef community structure and function. We quantify the influence of coral composition, diversity, and morpho-functional traits on the architectural complexity of reefs across 91 sites at Cozumel, Mexico. Although reef architectural complexity increases with coral cover and species richness, it is highest on sites that are low in taxonomic evenness and dominated by morpho-functionally important, reef-building coral genera, particularly Montastraea. Sites with similar coral community composition also tend to occur on reefs with very similar architectural complexity, suggesting that reef structure tends to be determined by the same key species across sites. Our findings provide support for prioritizing and protecting particular reef types, especially those dominated by key reef-building corals, in order to enhance reef complexity.

  2. Octocoral Species Assembly and Coexistence in Caribbean Coral Reefs.

    Directory of Open Access Journals (Sweden)

    Johanna Velásquez

    Full Text Available What are the determinant factors of community assemblies in the most diverse ecosystem in the ocean? Coral reefs can be divided in continental (i.e., reefs that develop on the continental shelf, including siliciclastic reefs and oceanic (i.e., far off the continental shelf, usually on volcanic substratum; whether or not these habitat differences impose community-wide ecological divergence or species exclusion/coexistence with evolutionary consequences, is unknown.Studying Caribbean octocorals as model system, we determined the phylogenetic community structure in a coral reef community, making emphasis on species coexistence evidenced on trait evolution and environmental feedbacks. Forty-nine species represented in five families constituted the species pool from which a phylogenetic tree was reconstructed using mtDNA. We included data from 11 localities in the Western Caribbean (Colombia including most reef types. To test diversity-environment and phenotype-environment relationships, phylogenetic community structure and trait evolution we carried out comparative analyses implementing ecological and evolutionary approaches.Phylogenetic inferences suggest clustering of oceanic reefs (e.g., atolls contrasting with phylogenetic overdispersion of continental reefs (e.g., reefs banks. Additionally, atolls and barrier reefs had the highest species diversity (Shannon index whereas phylogenetic diversity was higher in reef banks. The discriminant component analysis supported this differentiation between oceanic and continental reefs, where continental octocoral species tend to have greater calyx apertures, thicker branches, prominent calyces and azooxanthellate species. This analysis also indicated a clear separation between the slope and the remaining habitats, caused by the presence or absence of Symbiodinium. K statistic analysis showed that this trait is conserved as well as the branch shape.There was strong octocoral community structure with opposite

  3. Octocoral Species Assembly and Coexistence in Caribbean Coral Reefs.

    Science.gov (United States)

    Velásquez, Johanna; Sánchez, Juan A

    2015-01-01

    What are the determinant factors of community assemblies in the most diverse ecosystem in the ocean? Coral reefs can be divided in continental (i.e., reefs that develop on the continental shelf, including siliciclastic reefs) and oceanic (i.e., far off the continental shelf, usually on volcanic substratum); whether or not these habitat differences impose community-wide ecological divergence or species exclusion/coexistence with evolutionary consequences, is unknown. Studying Caribbean octocorals as model system, we determined the phylogenetic community structure in a coral reef community, making emphasis on species coexistence evidenced on trait evolution and environmental feedbacks. Forty-nine species represented in five families constituted the species pool from which a phylogenetic tree was reconstructed using mtDNA. We included data from 11 localities in the Western Caribbean (Colombia) including most reef types. To test diversity-environment and phenotype-environment relationships, phylogenetic community structure and trait evolution we carried out comparative analyses implementing ecological and evolutionary approaches. Phylogenetic inferences suggest clustering of oceanic reefs (e.g., atolls) contrasting with phylogenetic overdispersion of continental reefs (e.g., reefs banks). Additionally, atolls and barrier reefs had the highest species diversity (Shannon index) whereas phylogenetic diversity was higher in reef banks. The discriminant component analysis supported this differentiation between oceanic and continental reefs, where continental octocoral species tend to have greater calyx apertures, thicker branches, prominent calyces and azooxanthellate species. This analysis also indicated a clear separation between the slope and the remaining habitats, caused by the presence or absence of Symbiodinium. K statistic analysis showed that this trait is conserved as well as the branch shape. There was strong octocoral community structure with opposite diversity

  4. Satellite-Observed Black Water Events off Southwest Florida: Implications for Coral Reef Health in the Florida Keys National Marine Sanctuary

    Directory of Open Access Journals (Sweden)

    Brian Lapointe

    2013-01-01

    Full Text Available A “black water” event, as observed from satellites, occurred off southwest Florida in 2012. Satellite observations suggested that the event started in early January and ended in mid-April 2012. The black water patch formed off central west Florida and advected southward towards Florida Bay and the Florida Keys with the shelf circulation, which was confirmed by satellite-tracked surface drifter trajectories. Compared with a previous black water event in 2002, the 2012 event was weaker in terms of spatial and temporal coverage. An in situ survey indicated that the 2012 black water patch contained toxic K. brevis and had relatively low CDOM (colored dissolved organic matter and turbidity but high chlorophyll-a concentrations, while salinity was somewhat high compared with historical values. Further analysis revealed that the 2012 black water was formed by the K. brevis bloom initiated off central west Florida in late September 2011, while river runoff, Trichodesmium and possibly submarine groundwater discharge also played important roles in its formation. Black water patches can affect benthic coral reef communities by decreasing light availability at the bottom, and enhanced nutrient concentrations from black water patches support massive macroalgae growth that can overgrow coral reefs. It is thus important to continue the integrated observations where satellites provide synoptic and repeated observations of such adverse water quality events.

  5. Understanding the murky history of the Coral Triangle: Miocene corals and reef habitats in East Kalimantan (Indonesia)

    Science.gov (United States)

    Santodomingo, Nadiezhda; Renema, Willem; Johnson, Kenneth G.

    2016-09-01

    Studies on ancient coral communities living in marginal conditions, including low light, high turbidity, extreme temperatures, or high nutrients, are important to understand the current structure of reefs and how they could potentially respond to global changes. The main goal of this study was to document the rich and well-preserved fossil coral fauna preserved in Miocene exposures of the Kutai Basin in East Kalimantan, Indonesia. Our collections include almost forty thousand specimens collected from 47 outcrops. Seventy-nine genera and 234 species have been identified. Three different coral assemblages were found corresponding to small patch reefs that developed under the influence of high siliciclastic inputs from the Mahakam Delta. Coral assemblages vary in richness, structure, and composition. Platy coral assemblages were common until the Serravallian (Middle Miocene), while branching coral assemblages became dominant in the Tortonian (Late Miocene). By the late Tortonian massive coral assemblages dominated, similar to modern-style coral framework. Our results suggest that challenging habitats, such as the Miocene turbid habitats of East Kalimantan, might have played an important role during the early diversification of the Coral Triangle by hosting a pool of resilient species more likely to survive the environmental changes that have affected this region since the Cenozoic. Further research that integrates fossil and recent turbid habitats may provide a glimpse into the dynamics and future of coral reefs as "typical" clear-water reefs continue to decline in most regions.

  6. Influence of Coral Bleaching on the Fauna of Tutia Reef, Tanzania

    OpenAIRE

    Öhman, M.C.; Lindahl, U.; Schelten, C.K.

    1999-01-01

    In 1998, coral reefs of Tanzania were severely affected by bleaching. The coral mortality that followed caused a concern for coral reef degradation and overall resource depletion. In this study, we investigated coral bleaching effects on the coral reef fauna at Tutia Reef in Mafia Island Marine Park, Tanzania. Corals from adjacent reef patches of the species Acropora formosa were transplanted into plots, and reef structure and associated fish assemblages were examined before and after the ble...

  7. Climate-driven coral reorganisation influences aggressive behaviour in juvenile coral-reef fishes

    Science.gov (United States)

    Kok, Judith E.; Graham, Nicholas A. J.; Hoogenboom, Mia O.

    2016-06-01

    Globally, habitat degradation is altering the abundance and diversity of species in a variety of ecosystems. This study aimed to determine how habitat degradation, in terms of changing coral composition under climate change, affected abundance, species richness and aggressive behaviour of juveniles of three damselfishes ( Pomacentrus moluccensis, P. amboinensis and Dischistodus perspicillatus, in order of decreasing reliance on coral). Patch reefs were constructed to simulate two types of reefs: present-day reefs that are vulnerable to climate-induced coral bleaching, and reefs with more bleaching-robust coral taxa, thereby simulating the likely future of coral reefs under a warming climate. Fish communities were allowed to establish naturally on the reefs during the summer recruitment period. Climate-robust reefs had lower total species richness of coral-reef fishes than climate-vulnerable reefs, but total fish abundance was not significantly different between reef types (pooled across all species and life-history stages). The nature of aggressive interactions, measured as the number of aggressive chases, varied according to coral composition; on climate-robust reefs, juveniles used the substratum less often to avoid aggression from competitors, and interspecific aggression became relatively more frequent than intraspecific aggression for juveniles of the coral-obligate P. moluccensis. This study highlights the importance of coral composition as a determinant of behaviour and diversity of coral-reef fishes.

  8. 210Pb-226Ra chronology reveals rapid growth rate of Madrepora oculata and Lophelia pertusa on world's largest cold-water coral reef

    Directory of Open Access Journals (Sweden)

    N. Tisnérat-Laborde

    2012-03-01

    Full Text Available Here we show the use of the 210Pb-226Ra excess method to determine the growth rate of two corals from the world's largest known cold-water coral reef, Røst Reef, north of the Arctic circle off Norway. Colonies of each of the two species that build the reef, Lophelia pertusa and Madrepora oculata, were collected alive at 350 m depth using a submersible. Pb and Ra isotopes were measured along the major growth axis of both specimens using low level alpha and gamma spectrometry and trace element compositions were studied. 210Pb and 226Ra differ in the way they are incorporated into coral skeletons. Hence, to assess growth rates, we considered the exponential decrease of initially incorporated 210Pb, as well as the increase in 210Pb from the decay of 226Ra and contamination with 210Pb associated with Mn-Fe coatings that we were unable to remove completely from the oldest parts of the skeletons. 226Ra activity was similar in both coral species, so, assuming constant uptake of 210Pb through time, we used the 210Pb-226Ra chronology to calculate growth rates. The 45.5 cm long branch of M. oculata was 31 yr with an average linear growth rate of 14.4 ± 1.1 mm yr−1 (2.6 polyps per year. Despite cleaning, a correction for Mn-Fe oxide contamination was required for the oldest part of the colony; this correction corroborated our radiocarbon date of 40 yr and a mean growth rate of 2 polyps yr−1. This rate is similar to the one obtained in aquarium experiments under optimal growth conditions. For the 80 cm-long L. pertusa colony, metal-oxide contamination remained in both the middle and basal part of the coral skeleton despite cleaning, inhibiting similar age and growth rate estimates. The youngest part of the colony was free of metal oxides and this 15 cm section had an estimated a growth rate of 8 mm yr−1, with high uncertainty (~1 polyp every two to three years. We are less certain of this 210Pb growth rate estimate which is within the lowermost

  9. Sensing coral reef connectivity pathways from space

    KAUST Repository

    Raitsos, Dionysios E.

    2017-08-18

    Coral reefs rely on inter-habitat connectivity to maintain gene flow, biodiversity and ecosystem resilience. Coral reef communities of the Red Sea exhibit remarkable genetic homogeneity across most of the Arabian Peninsula coastline, with a genetic break towards the southern part of the basin. While previous studies have attributed these patterns to environmental heterogeneity, we hypothesize that they may also emerge as a result of dynamic circulation flow; yet, such linkages remain undemonstrated. Here, we integrate satellite-derived biophysical observations, particle dispersion model simulations, genetic population data and ship-borne in situ profiles to assess reef connectivity in the Red Sea. We simulated long-term (>20 yrs.) connectivity patterns driven by remotely-sensed sea surface height and evaluated results against estimates of genetic distance among populations of anemonefish, Amphiprion bicinctus, along the eastern Red Sea coastline. Predicted connectivity was remarkably consistent with genetic population data, demonstrating that circulation features (eddies, surface currents) formulate physical pathways for gene flow. The southern basin has lower physical connectivity than elsewhere, agreeing with known genetic structure of coral reef organisms. The central Red Sea provides key source regions, meriting conservation priority. Our analysis demonstrates a cost-effective tool to estimate biophysical connectivity remotely, supporting coastal management in data-limited regions.

  10. 210Pb-226Ra chronology reveals rapid growth rate of Madrepora oculata and Lophelia pertusa on world's largest cold-water coral reef

    Directory of Open Access Journals (Sweden)

    N. Tisnérat-Laborde

    2011-12-01

    Full Text Available Here we show the use of the 210Pb-226Ra excess method to determine the growth rate of corals from one of the world's largest known cold-water coral reef, the Røst Reef off Norway. Two large branching framework-forming cold-water coral specimens, one Lophelia pertusa and one Madrepora oculata were collected alive at 350 m water depth from the Røst Reef at ~67° N and ~9° E. Pb and Ra isotopes were measured along the major growth axis of both specimens using low level alpha and gamma spectrometry and the corals trace element compositions were studied using ICP-QMS. Due to the different chemical behaviors of Pb and Ra in the marine environment, 210Pb and 226Ra were not incorporated the same way into the aragonite skeleton of those two cold-water corals. Thus to assess of the growth rates of both specimens we have here taken in consideration the exponential decrease of initially incorporated 210Pb as well as the ingrowth of 210Pb from the decay of 226Ra. Moreover a~post-depositional 210Pb incorporation is found in relation to the Mn-Fe coatings that could not be entirely removed from the oldest parts of the skeletons. The 226Ra activities in both corals were fairly constant, then assuming constant uptake of 210Pb through time the 210Pb-226Ra chronology can be applied to calculate linear growth rate. The 45.5 cm long branch of M. oculata reveals an age of 31 yr and a~linear growth rate of 14.4 ± 1.1 mm yr−1, i.e. 2.6 polyps per year. However, a correction regarding a remaining post-depositional Mn-Fe oxide coating is needed for the base of the specimen. The corrected age tend to confirm the radiocarbon derived basal age of 40 yr (using 14C bomb peak with a mean growth rate of 2 polyps yr−1. This rate is similar to the one obtained in Aquaria experiments under optimal growth conditions. For the 80 cm-long specimen of L. pertusa a remaining contamination of metal-oxides is observed for the middle and basal part of the coral skeleton, inhibiting

  11. Multiple Stressors and the Functioning of Coral Reefs

    Science.gov (United States)

    Harborne, Alastair R.; Rogers, Alice; Bozec, Yves-Marie; Mumby, Peter J.

    2017-01-01

    Coral reefs provide critical services to coastal communities, and these services rely on ecosystem functions threatened by stressors. By summarizing the threats to the functioning of reefs from fishing, climate change, and decreasing water quality, we highlight that these stressors have multiple, conflicting effects on functionally similar groups of species and their interactions, and that the overall effects are often uncertain because of a lack of data or variability among taxa. The direct effects of stressors on links among functional groups, such as predator-prey interactions, are particularly uncertain. Using qualitative modeling, we demonstrate that this uncertainty of stressor impacts on functional groups (whether they are positive, negative, or neutral) can have significant effects on models of ecosystem stability, and reducing uncertainty is vital for understanding changes to reef functioning. This review also provides guidance for future models of reef functioning, which should include interactions among functional groups and the cumulative effect of stressors.

  12. The structure and composition of Holocene coral reefs in the Middle Florida Keys

    Science.gov (United States)

    Toth, Lauren T.; Stathakopoulos, Anastasios; Kuffner, Ilsa B.

    2016-07-21

    The Florida Keys reef tract (FKRT) is the largest coral-reef ecosystem in the continental United States. The modern FKRT extends for 362 kilometers along the coast of South Florida from Dry Tortugas National Park in the southwest, through the Florida Keys National Marine Sanctuary (FKNMS), to Fowey Rocks reef in Biscayne National Park in the northeast. Most reefs along the FKRT are sheltered by the exposed islands of the Florida Keys; however, large channels are located between the islands of the Middle Keys. These openings allow for tidal transport of water from Florida Bay onto reefs in the area. The characteristics of the water masses coming from Florida Bay, which can experience broad swings in temperature, salinity, nutrients, and turbidity over short periods of time, are generally unfavorable or “inimical” to coral growth and reef development.Although reef habitats are ubiquitous throughout most of the Upper and Lower Keys, relatively few modern reefs exist in the Middle Keys most likely because of the impacts of inimical waters from Florida Bay. The reefs that are present in the Middle Keys generally are poorly developed compared with reefs elsewhere in the region. For example, Acropora palmata has been the dominant coral on shallow-water reefs in the Caribbean over the last 1.5 million years until populations of the coral declined throughout the region in recent decades. Although A. palmata was historically abundant in the Florida Keys, it was conspicuously absent from reefs in the Middle Keys. Instead, contemporary reefs in the Middle Keys have been dominated by occasional massive (that is, boulder or head) corals and, more often, small, non-reef-building corals.Holocene reef cores have been collected from many locations along the FKRT; however, despite the potential importance of the history of reefs in the Middle Florida Keys to our understanding of the environmental controls on reef development throughout the FKRT, there are currently no published

  13. Carrying capacity of coral reefs

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.

    The sustainable yield of a commercially exploited fishery is assessed by the biological and environmental factors (including fishing effort). These parameters with a reef are vastly diverse-size, location, species diversity, productivity type...

  14. The Decline of Coral Reefs: a Political Economy Approach

    OpenAIRE

    Samuel, Asumadu-Sarkodie

    2015-01-01

    Coral reefs provide economic services like job, food and tourism. Yet, within the past decades, there has been an overwhelming decline in the vitality of coral reefs and their ecosystem. Scientist have not be able to set the record straight regarding their scientific argument on biodiversity and ecological wealth of natural environment. Therefore, actions to recover coral reefs from destruction have proved futile. This paper will analyze the economical values, economic valuation, socioeconomi...

  15. Contribution of the thraustochytrid Corallochytrium limacisporum Raghu-kumar to microbial biomass in coral reef lagoons

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, S.; Chandramohan, D.; Ramaiah, N.

    on the number of C limacisporum, total viable bacteria (saprophyte numbers), chlorophyll a content and total ATP in the lagoon waters, the contribution of C limacisporum to the microbial biomass in coral reef lagoons of the Lakshadweep islands was calculated...

  16. Underwater temperature on off-shore coral reefs of the Florida Keys, U.S.A.

    Science.gov (United States)

    Kuffner, Ilsa B.

    2017-01-01

    The USGS Coral Reef Ecosystems Studies project (http://coastal.er.usgs.gov/crest/) provides science that helps resource managers tasked with the stewardship of coral reef resources. Coral reef organisms are very sensitive to high and low water-temperature extremes. It is critical to precisely know water temperatures experienced by corals and associated plants and animals that live in the dynamic, nearshore environment to document thresholds in temperature tolerance. Here we provide underwater temperature data recorded every fifteen minutes since 2009 at five off-shore coral reefs in the Florida Keys. From northeast to southwest, these sites are Fowey Rocks (Biscayne National Park), Molasses Reef (Florida Keys National Marine Sanctuary, FKNMS), Crocker Reef (FKNMS), Sombrero Reef (FKNMS), and Pulaski Shoal (Dry Tortugas National Park). Temperatures were recorded with Onset® HOBO® Water Temp Pro V2 (U22-001) data loggers in duplicate at each site. Loggers were attached to concrete blocks fixed to the reef with stainless-steel rods and epoxy at depths of 13 to 16 feet of seawater. A portion of the dataset included here was interpreted in conjunction with coral and algal calcification rates in Kuffner et al. (2013).Kuffner, I.B., Hickey, T.D., and Morrison J.M., 2013, Calcification rates of the massive coral Siderastrea siderea and crustose coralline algae along the Florida Keys (USA) outer-reef tract. Coral Reefs 32:987-997. https://doi.org/10.1007/s00338-013-1047-8Note: This data release was versioned on February 01, 2017. Please see the Suggested Citation section for details.

  17. Quantifying water flow within aquatic ecosystems using load cell sensors: a profile of currents experienced by coral reef organisms around Lizard Island, Great Barrier Reef, Australia.

    Directory of Open Access Journals (Sweden)

    Jacob L Johansen

    Full Text Available Current velocity in aquatic environments has major implications for the diversity, abundance and ecology of aquatic organisms, but quantifying these currents has proven difficult. This study utilises a simple and inexpensive instrument (500 cms⁻¹ and wave frequency to >100 Hz over several weeks. Sensor data are registered and processed at 16 MHz and 10 bit resolution, with a measuring precision of 0.06±0.04%, and accuracy of 0.51±0.65% (mean ±S.D.. Each instrument is also pressure rated to 120 m and shear stresses ≤20 kNm⁻² allowing deployment in harsh environments. The instrument was deployed across 27 coral reef sites covering the crest (3 m, mid-slope (6 m and deep-slope (9 m depth of habitats directly exposed, oblique or sheltered from prevailing winds. Measurements demonstrate that currents over the reef slope and crest varies immensely depending on depth and exposure: currents differ up to 9-fold within habitats only separated by 3 m depth and 15-fold between exposed, oblique and sheltered habitats. Comparisons to ambient weather conditions reveal that currents around Lizard Island are largely wind driven. Zero to 22.5 knot winds correspond directly to currents of 0 to >82 cms⁻¹, while tidal currents rarely exceed 5.5 cms⁻¹. Rather, current velocity increases exponentially as a function of wave height (0 to 1.6 m and frequency (0.54 to 0.20 Hz, emphasizing the enormous effect of wind and waves on organisms in these shallow coral reef habitats.

  18. 75 FR 39917 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Coral and Coral Reefs off the...

    Science.gov (United States)

    2010-07-13

    ..., and South Atlantic; Coral and Coral Reefs off the Southern Atlantic States; Exempted Fishing Permit... for Coral, Coral Reefs, and Live/Hardbottom Habitat of the South Atlantic Region. The applicant has... Coral Reef Research Foundation (CRRF, http://www.coralreefresearchfoundation.org/ ). Samples would be...

  19. 76 FR 30110 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Coral and Coral Reefs Off the...

    Science.gov (United States)

    2011-05-24

    ..., and South Atlantic; Coral and Coral Reefs Off the Southern Atlantic States; Exempted Fishing Permit... implementing the Fishery Management Plan for Coral, Coral Reefs, and Live/Hardbottom Habitat of the South... Cancer Institute ( http://www.cancer.gov/ ) and the Coral Reef Research Foundation (CRRF, http://www...

  20. Coral reefs in the South China Sea: Their response to and records on past environmental changes

    Institute of Scientific and Technical Information of China (English)

    YU KeFu

    2012-01-01

    This paper reviews both the recent and longer-term (Holocene) ecological history of coral reefs in the South China Sea (SCS).(1) Local ecological monitoring since the 1960s shows that the coral reefs in the South China Sea have declined dramatically,reflecting the rapid decrease of living coral cover and the great loss of symbiotic zooxanthellae.Collectively,this has led to a significant decrease of annual CaCO3 production.Heavy anthropogenic activities and global warming are recognized as major triggers of the observed coral reef degradation.Observations show that the modern coral reefs in the SCS are a source of atmospheric CO2 in summer.(2) Coral reefs of the SCS have been widely used to reveal longer-term environmental variations,including Holocene high-resolution sea surface temperature (SST) and abrupt climate events,millennial-scale E1 Ni(n)o variations,millennial-and centennial-scale sea level oscillations,strong and cyclic storm activities,East Asian monsoon intensities,variation in seawater pH,and recent seawater pollution,(3) Coral reefs of the southern SCS have experienced repeated episodes of bleaching over the last 200 years due to high SST and intense E1 Ni(n)o events; coral reefs of the northern SCS suffered high levels of mortality during several abrupt winter cold-water bleaching events during the middle Holocene warm period.On average,recovery after the middle Holocene cold-bleaching took 20-30 years; recovery following other middle Holocene environmental stresses took approximately 1020 years.Such findings have significantly contributed to the understanding of the present ecological pressures faced by the coral reefs in the SCS,the histories of Holocene climate/environment changes,and the long-term models of coral reef responses to various past environmental changes.

  1. Multisensor and multitemporal data from Landsat images to detect damage to coral reefs, small islands in the Spermonde archipelago, Indonesia

    Science.gov (United States)

    Nurdin, Nurjannah; Komatsu, Teruhisa; Agus; Akbar AS, M.; Djalil, Abdul Rasyid; Amri, Khairul

    2015-06-01

    Coral reefs are important because of their high biodiversity and their key role in the tropical marine biosphere. Furthermore, coral reefs are very valuable as a socioeconomic resource as they make important contributions to the gross domestic product of many countries. Thus, it is very important to monitor dynamic spatial distributions of coral reefs and related habitats dominated by coral rubble, dead coral, and bleached corals. Despite these natural and socio-economic advantages, many factors are threatening coral reefs. The study site was selected in Spermonde archipelago, South Sulawesi, Indonesia because this area is included in the Coral Triangle, recognized as the epicenter of coral diversity and a priority for conservation. Images of Landsat MSS, Landsat TM, Landsat ETM, Landsat ETM+, and Landsat 8 data were used to examine changes in the coral reefs of Suranti Island in the Spermonde Archipelago during forty one years from 1972 to 2013. The image processing includes gap fills, atmospheric corrections, geometric corrections, image composites, water column corrections, unsupervised classifications, and reclassifications. Fill Gap processing was done on Landsat ETM+ SLC-off. Subsequently, a multi-component change detection procedure was applied to define changes. Shallow water bottom types classification was divided into live coral, rubble and sand habitats, dead coral with algae, rubble, and sand. Preliminary results showed significant changes during the period 1972-2013 as well as changes in coral reefs, likely explained partly by destructive fishing practices.

  2. Climate Change, Human Impacts, and the Resilience of Coral Reefs

    Science.gov (United States)

    Hughes, T. P.; Baird, A. H.; Bellwood, D. R.; Card, M.; Connolly, S. R.; Folke, C.; Grosberg, R.; Hoegh-Guldberg, O.; Jackson, J. B. C.; Kleypas, J.; Lough, J. M.; Marshall, P.; Nyström, M.; Palumbi, S. R.; Pandolfi, J. M.; Rosen, B.; Roughgarden, J.

    2003-08-01

    The diversity, frequency, and scale of human impacts on coral reefs are increasing to the extent that reefs are threatened globally. Projected increases in carbon dioxide and temperature over the next 50 years exceed the conditions under which coral reefs have flourished over the past half-million years. However, reefs will change rather than disappear entirely, with some species already showing far greater tolerance to climate change and coral bleaching than others. International integration of management strategies that support reef resilience need to be vigorously implemented, and complemented by strong policy decisions to reduce the rate of global warming.

  3. The use of cellular diagnostics for identifying sub-lethal stress in reef corals.

    Science.gov (United States)

    Downs, Craig A; Ostrander, Gary K; Rougee, Luc; Rongo, Teina; Knutson, Sean; Williams, David E; Mendiola, Wendy; Holbrook, Jackalyn; Richmond, Robert H

    2012-04-01

    Coral reefs throughout the world are exhibiting documented declines in coral cover and species diversity, which have been linked to anthropogenic stressors including land-based sources of pollution. Reductions in coastal water and substratum quality are affecting coral survivorship, reproduction and recruitment, and hence, the persistence of coral reefs. One major obstacle in effectively addressing these declines is the lack of tools that can identify cause-and-effect relationships between stressors and specific coral reef losses, while a second problem is the inability to measure the efficacy of mitigation efforts in a timely fashion. We examined corals from six coral reefs on Guam, Mariana Islands, which were being affected by different environmental stressors (e.g. PAH's, pesticides, PCB's and sedimentation). Cellular diagnostic analysis differentiated the cellular-physiological condition of these corals. Examination of protein expression provided insight into their homeostatic responses to chemical and physical stressors in exposed corals prior to outright mortality, providing improved opportunities for developing locally-based management responses. This approach adds critically needed tools for addressing the effects of multiple stressors on corals and will allow researchers to move beyond present assessment and monitoring techniques that simply document the loss of coral abundance and diversity.

  4. Holocene coral patch reef ecology and sedimentary architecture, Northern Belize, Central America

    Energy Technology Data Exchange (ETDEWEB)

    Mazzullo, S.J.; Anderson-Underwood, K.E.; Burke, C.D.; Bischoff, W.D. (Wichita State Univ., KS (United States))

    1992-12-01

    Coral patch reefs are major components of Holocene platform carbonate facies systems in tropical and subtropical areas. The biotic composition, growth and relationship to sea level history, and diagenetic attributes of a representative Holocene patch reef ([open quotes]Elmer Reef[close quotes]) in the Mexico Rocks complex in northern Belize are described and compared to those of Holocene patch reefs in southern Belize. Elmer Reef has accumulated in shallow (2.5 m) water over the last 420 yr, under static sea level conditions. Rate of vertical construction is 0.3-0.5 m/100 yr, comparable to that of patch reefs in southern Belize. A pronounced coral zonation exists across Elmer Reef, with Monastrea annularis dominating on its crest and Acropora cervicornis occurring on its windward and leeward flanks. The dominance of Montastrea on Elmer Reef is unlike that of patch reefs in southern Belize, in which this coral assumes only a subordinate role in reef growth relative to that of Acropora palmata. Elmer Reef locally is extensively biodegraded and marine, fibrous aragonite and some bladed high-magnesium calcite cements occur throughout the reef section, partially occluding corallites and interparticle pores in associated sands. Patch reefs in southern Belize have developed as catch-up and keep-up reefs in a transgressive setting. In contrast, the dominant mode of growth of Elmer Reef, and perhaps other patch reefs in Mexico Rocks, appears to be one of lateral rather than vertical accretion. This style of growth occurs in a static sea level setting where there is only limited accommodation space because of the shallowness of the water, and such reefs are referred to as [open quotes]expansion reefs[close quotes]. 39 refs., 8 figs., 2 tabs.

  5. Effects of nutrient enrichment on the primary producers of a degraded coral reef

    NARCIS (Netherlands)

    den Haan, J.

    2015-01-01

    Coral reefs are highly diverse and productive ecosystems, teeming with life in often very nutrient-poor waters. However, during the past decades various human activities, including sewage discharge and land runoff augmented by coastal construction, have enriched the waters overlying many reefs aroun

  6. Oceanographic and behavioural assumptions in models of the fate of coral and coral reef fish larvae.

    Science.gov (United States)

    Wolanski, Eric; Kingsford, Michael J

    2014-09-06

    A predictive model of the fate of coral reef fish larvae in a reef system is proposed that combines the oceanographic processes of advection and turbulent diffusion with the biological process of horizontal swimming controlled by olfactory and auditory cues within the timescales of larval development. In the model, auditory cues resulted in swimming towards the reefs when within hearing distance of the reef, whereas olfactory cues resulted in the larvae swimming towards the natal reef in open waters by swimming against the concentration gradients in the smell plume emanating from the natal reef. The model suggested that the self-seeding rate may be quite large, at least 20% for the larvae of rapidly developing reef fish species, which contrasted with a self-seeding rate less than 2% for non-swimming coral larvae. The predicted self-recruitment rate of reefs was sensitive to a number of parameters, such as the time at which the fish larvae reach post-flexion, the pelagic larval duration of the larvae, the horizontal turbulent diffusion coefficient in reefal waters and the horizontal swimming behaviour of the fish larvae in response to auditory and olfactory cues, for which better field data are needed. Thus, the model suggested that high self-seeding rates for reef fish are possible, even in areas where the 'sticky water' effect is minimal and in the absence of long-term trapping in oceanic fronts and/or large-scale oceanic eddies or filaments that are often argued to facilitate the return of the larvae after long periods of drifting at sea. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  7. The COral-REef Front (COREF Project

    Directory of Open Access Journals (Sweden)

    John A. and Katherine G. Jackson

    2007-09-01

    Full Text Available The First International Workshop on the COral-REef Front (COREF project was held on 14−19 January 2007 in Okinawa-jima, southwestern Japan to discuss objectives, required laboratory analyses and techniques, potential drilling sites, and scientific proposals for the Integrated Ocean Drilling Program (IODP and the International Continental Scientific Drilling Program (ICDP. This article briefly introduces the project and reports the outcome of the First International Workshop on the COREF Project.

  8. Threatened Reef Corals of the World

    OpenAIRE

    Danwei Huang

    2012-01-01

    A substantial proportion of the world's living species, including one-third of the reef-building corals, are threatened with extinction and in pressing need of conservation action. In order to reduce biodiversity loss, it is important to consider species' contribution to evolutionary diversity along with their risk of extinction for the purpose of setting conservation priorities. Here I reconstruct the most comprehensive tree of life for the order Scleractinia (1,293 species) that includes al...

  9. Human impacts on Caribbean coral reef ecosystems

    OpenAIRE

    Hardt, Marah Justine

    2007-01-01

    Fishing is one of the oldest anthropogenic disturbances in the ocean, differing from other impacts in its direct removal of biomass from the ecosystem. Despite the centuries of fishing activities, there is much we still do not understand regarding the effects of fish removal on the benthic community. I use an interdisciplinary approach to investigate the affect of human disturbance, primarily the alteration of fish communities, on major functional groups of coral reefs, over extended temporal...

  10. Coral Reef Remote Sensing: Helping Managers Protect Reefs in a Changing Climate

    Science.gov (United States)

    Eakin, C.; Liu, G.; Li, J.; Muller-Karger, F. E.; Heron, S. F.; Gledhill, D. K.; Christensen, T.; Rauenzahn, J.; Morgan, J.; Parker, B. A.; Skirving, W. J.; Nim, C.; Burgess, T.; Strong, A. E.

    2010-12-01

    Climate change and ocean acidification are already having severe impacts on coral reef ecosystems. Warming oceans have caused corals to bleach, or expel their symbiotic algae (zooxanthellae) with alarming frequency and severity and have contributed to a rise in coral infectious diseases. Ocean acidification is reducing the availability of carbonate ions needed by corals and many other marine organisms to build structural components like skeletons and shells and may already be slowing the coral growth. These two impacts are already killing corals and slowing reef growth, reducing biodiversity and the structure needed to provide crucial ecosystem services. NOAA’s Coral Reef Watch (CRW) uses a combination of satellite data, in situ observations, and models to provide coral reef managers, scientists, and others with information needed to monitor threats to coral reefs. The advance notice provided by remote sensing and models allows resource managers to protect corals, coral reefs, and the services they provide, although managers often encounter barriers to implementation of adaptation strategies. This talk will focus on application of NOAA’s satellite and model-based tools that monitor the risk of mass coral bleaching on a global scale, ocean acidification in the Caribbean, and coral disease outbreaks in selected regions, as well as CRW work to train managers in their use, and barriers to taking action to adapt to climate change. As both anthropogenic CO2 and temperatures will continue to rise, local actions to protect reefs are becoming even more important.

  11. Detection of spatial fluctuations of non-point source fecal pollution in coral reef surrounding waters in southwestern Puerto Rico using PCR-based assays.

    Science.gov (United States)

    Bonkosky, M; Hernández-Delgado, E A; Sandoz, B; Robledo, I E; Norat-Ramírez, J; Mattei, H

    2009-01-01

    Human fecal contamination of coral reefs is a major cause of concern. Conventional methods used to monitor microbial water quality cannot be used to discriminate between different fecal pollution sources. Fecal coliforms, enterococci, and human-specific Bacteroides (HF183, HF134), general Bacteroides-Prevotella (GB32), and Clostridium coccoides group (CP) 16S rDNA PCR assays were used to test for the presence of non-point source fecal contamination across the southwestern Puerto Rico shelf. Inshore waters were highly turbid, consistently receiving fecal pollution from variable sources, and showing the highest frequency of positive molecular marker signals. Signals were also detected at offshore waters in compliance with existing microbiological quality regulations. Phylogenetic analysis showed that most isolates were of human fecal origin. The geographic extent of non-point source fecal pollution was large and impacted extensive coral reef systems. This could have deleterious long-term impacts on public health, local fisheries and in tourism potential if not adequately addressed.

  12. A framework for understanding drag parameterizations for coral reefs

    Science.gov (United States)

    Rosman, Johanna H.; Hench, James L.

    2011-08-01

    In a hydrodynamic sense, a coral reef is a complex array of obstacles that exerts a net drag force on water moving over the reef. This drag is typically parameterized in ocean circulation models using drag coefficients (CD) or roughness length scales (z0); however, published CD for coral reefs span two orders of magnitude, posing a challenge to predictive modeling. Here we examine the reasons for the large range in reported CD and assess the limitations of using CD and z0 to parameterize drag on reefs. Using a formal framework based on the 3-D spatially averaged momentum equations, we show that CD and z0 are functions of canopy geometry and velocity profile shape. Using an idealized two-layer model, we illustrate that CD can vary by more than an order of magnitude for the same geometry and flow depending on the reference velocity selected and that differences in definition account for much of the range in reported CD values. Roughness length scales z0 are typically used in 3-D circulation models to adjust CD for reference height, but this relies on spatially averaged near-bottom velocity profiles being logarithmic. Measurements from a shallow backreef indicate that z0 determined from fits to point measurements of velocity profiles can be very different from z0 required to parameterize spatially averaged drag. More sophisticated parameterizations for drag and shear stresses are required to simulate 3-D velocity fields over shallow reefs; in the meantime, we urge caution when using published CD and z0 values for coral reefs.

  13. 10th Anniversary Review: a changing climate for coral reefs.

    Science.gov (United States)

    Lough, Janice M

    2008-01-01

    Tropical coral reefs are charismatic ecosystems that house a significant proportion of the world's marine biodiversity. Their valuable goods and services are fundamental to the livelihood of large coastal populations in the tropics. The health of many of the world's coral reefs, and the goods and services they provide, have already been severely compromised, largely due to over-exploitation by a range of human activities. These local-scale impacts, with the appropriate government instruments, support and management actions, can potentially be controlled and even ameliorated. Unfortunately, other human actions (largely in countries outside of the tropics), by changing global climate, have added additional global-scale threats to the continued survival of present-day coral reefs. Moderate warming of the tropical oceans has already resulted in an increase in mass coral bleaching events, affecting nearly all of the world's coral reef regions. The frequency of these events will only increase as global temperatures continue to rise. Weakening of coral reef structures will be a more insidious effect of changing ocean chemistry, as the oceans absorb part of the excess atmospheric carbon dioxide. More intense tropical cyclones, changed atmospheric and ocean circulation patterns will all affect coral reef ecosystems and the many associated plants and animals. Coral reefs will not disappear but their appearance, structure and community make-up will radically change. Drastic greenhouse gas mitigation strategies are necessary to prevent the full consequences of human activities causing such alterations to coral reef ecosystems.

  14. CORAL REEFS. Genomic determinants of coral heat tolerance across latitudes.

    Science.gov (United States)

    Dixon, Groves B; Davies, Sarah W; Aglyamova, Galina A; Meyer, Eli; Bay, Line K; Matz, Mikhail V

    2015-06-26

    As global warming continues, reef-building corals could avoid local population declines through "genetic rescue" involving exchange of heat-tolerant genotypes across latitudes, but only if latitudinal variation in thermal tolerance is heritable. Here, we show an up-to-10-fold increase in odds of survival of coral larvae under heat stress when their parents come from a warmer lower-latitude location. Elevated thermal tolerance was associated with heritable differences in expression of oxidative, extracellular, transport, and mitochondrial functions that indicated a lack of prior stress. Moreover, two genomic regions strongly responded to selection for thermal tolerance in interlatitudinal crosses. These results demonstrate that variation in coral thermal tolerance across latitudes has a strong genetic basis and could serve as raw material for natural selection. Copyright © 2015, American Association for the Advancement of Science.

  15. Coral Reef Community Composition in the Context of Disturbance History on the Great Barrier Reef, Australia

    Science.gov (United States)

    Graham, Nicholas A. J.; Chong-Seng, Karen M.; Huchery, Cindy; Januchowski-Hartley, Fraser A.; Nash, Kirsty L.

    2014-01-01

    Much research on coral reefs has documented differential declines in coral and associated organisms. In order to contextualise this general degradation, research on community composition is necessary in the context of varied disturbance histories and the biological processes and physical features thought to retard or promote recovery. We conducted a spatial assessment of coral reef communities across five reefs of the central Great Barrier Reef, Australia, with known disturbance histories, and assessed patterns of coral cover and community composition related to a range of other variables thought to be important for reef dynamics. Two of the reefs had not been extensively disturbed for at least 15 years prior to the surveys. Three of the reefs had been severely impacted by crown-of-thorns starfish outbreaks and coral bleaching approximately a decade before the surveys, from which only one of them was showing signs of recovery based on independent surveys. We incorporated wave exposure (sheltered and exposed) and reef zone (slope, crest and flat) into our design, providing a comprehensive assessment of the spatial patterns in community composition on these reefs. Categorising corals into life history groupings, we document major coral community differences in the unrecovered reefs, compared to the composition and covers found on the undisturbed reefs. The recovered reef, despite having similar coral cover, had a different community composition from the undisturbed reefs, which may indicate slow successional processes, or a different natural community dominance pattern due to hydrology and other oceanographic factors. The variables that best correlated with patterns in the coral community among sites included the density of juvenile corals, herbivore fish biomass, fish species richness and the cover of macroalgae. Given increasing impacts to the Great Barrier Reef, efforts to mitigate local stressors will be imperative to encouraging coral communities to persist into

  16. Coral reef community composition in the context of disturbance history on the Great Barrier Reef, Australia.

    Directory of Open Access Journals (Sweden)

    Nicholas A J Graham

    Full Text Available Much research on coral reefs has documented differential declines in coral and associated organisms. In order to contextualise this general degradation, research on community composition is necessary in the context of varied disturbance histories and the biological processes and physical features thought to retard or promote recovery. We conducted a spatial assessment of coral reef communities across five reefs of the central Great Barrier Reef, Australia, with known disturbance histories, and assessed patterns of coral cover and community composition related to a range of other variables thought to be important for reef dynamics. Two of the reefs had not been extensively disturbed for at least 15 years prior to the surveys. Three of the reefs had been severely impacted by crown-of-thorns starfish outbreaks and coral bleaching approximately a decade before the surveys, from which only one of them was showing signs of recovery based on independent surveys. We incorporated wave exposure (sheltered and exposed and reef zone (slope, crest and flat into our design, providing a comprehensive assessment of the spatial patterns in community composition on these reefs. Categorising corals into life history groupings, we document major coral community differences in the unrecovered reefs, compared to the composition and covers found on the undisturbed reefs. The recovered reef, despite having similar coral cover, had a different community composition from the undisturbed reefs, which may indicate slow successional processes, or a different natural community dominance pattern due to hydrology and other oceanographic factors. The variables that best correlated with patterns in the coral community among sites included the density of juvenile corals, herbivore fish biomass, fish species richness and the cover of macroalgae. Given increasing impacts to the Great Barrier Reef, efforts to mitigate local stressors will be imperative to encouraging coral

  17. Coral reef community composition in the context of disturbance history on the Great Barrier Reef, Australia.

    Science.gov (United States)

    Graham, Nicholas A J; Chong-Seng, Karen M; Huchery, Cindy; Januchowski-Hartley, Fraser A; Nash, Kirsty L

    2014-01-01

    Much research on coral reefs has documented differential declines in coral and associated organisms. In order to contextualise this general degradation, research on community composition is necessary in the context of varied disturbance histories and the biological processes and physical features thought to retard or promote recovery. We conducted a spatial assessment of coral reef communities across five reefs of the central Great Barrier Reef, Australia, with known disturbance histories, and assessed patterns of coral cover and community composition related to a range of other variables thought to be important for reef dynamics. Two of the reefs had not been extensively disturbed for at least 15 years prior to the surveys. Three of the reefs had been severely impacted by crown-of-thorns starfish outbreaks and coral bleaching approximately a decade before the surveys, from which only one of them was showing signs of recovery based on independent surveys. We incorporated wave exposure (sheltered and exposed) and reef zone (slope, crest and flat) into our design, providing a comprehensive assessment of the spatial patterns in community composition on these reefs. Categorising corals into life history groupings, we document major coral community differences in the unrecovered reefs, compared to the composition and covers found on the undisturbed reefs. The recovered reef, despite having similar coral cover, had a different community composition from the undisturbed reefs, which may indicate slow successional processes, or a different natural community dominance pattern due to hydrology and other oceanographic factors. The variables that best correlated with patterns in the coral community among sites included the density of juvenile corals, herbivore fish biomass, fish species richness and the cover of macroalgae. Given increasing impacts to the Great Barrier Reef, efforts to mitigate local stressors will be imperative to encouraging coral communities to persist into

  18. The continuing decline of coral reefs in Bahrain.

    Science.gov (United States)

    Burt, John A; Al-Khalifa, Khalifa; Khalaf, Ebtesam; Alshuwaikh, Bassem; Abdulwahab, Ahmed

    2013-07-30

    Historically coral reefs of Bahrain were among the most extensive in the southern basin of the Arabian Gulf. However, Bahrain's reefs have undergone significant decline in the last four decades as a result of large-scale coastal development and elevated sea surface temperature events. Here we quantitatively surveyed six sites including most major coral reef habitats around Bahrain and a reef located 72 km offshore. Fleshy and turf algae now dominate Bahrain's reefs (mean: 72% cover), and live coral cover is low (mean: 5.1%). Formerly dominant Acropora were not observed at any site. The offshore Bulthama reef had the highest coral cover (16.3%) and species richness (22 of the 23 species observed, 13 of which were exclusive to this site). All reefs for which recent and historical data are available show continued degradation, and it is unlikely that they will recover under continuing coastal development and projected climate change impacts. Copyright © 2012 Elsevier Ltd. All rights reserved.

  19. Evidence for multiple stressor interactions and effects on coral reefs.

    Science.gov (United States)

    Ban, Stephen S; Graham, Nicholas A J; Connolly, Sean R

    2014-03-01

    Concern is growing about the potential effects of interacting multiple stressors, especially as the global climate changes. We provide a comprehensive review of multiple stressor interactions in coral reef ecosystems, which are widely considered to be one of the most sensitive ecosystems to global change. First, we synthesized coral reef studies that examined interactions of two or more stressors, highlighting stressor interactions (where one stressor directly influences another) and potentially synergistic effects on response variables (where two stressors interact to produce an effect that is greater than purely additive). For stressor-stressor interactions, we found 176 studies that examined at least 2 of the 13 stressors of interest. Applying network analysis to analyze relationships between stressors, we found that pathogens were exacerbated by more costressors than any other stressor, with ca. 78% of studies reporting an enhancing effect by another stressor. Sedimentation, storms, and water temperature directly affected the largest number of other stressors. Pathogens, nutrients, and crown-of-thorns starfish were the most-influenced stressors. We found 187 studies that examined the effects of two or more stressors on a third dependent variable. The interaction of irradiance and temperature on corals has been the subject of more research (62 studies, 33% of the total) than any other combination of stressors, with many studies reporting a synergistic effect on coral symbiont photosynthetic performance (n = 19). Second, we performed a quantitative meta-analysis of existing literature on this most-studied interaction (irradiance and temperature). We found that the mean effect size of combined treatments was statistically indistinguishable from a purely additive interaction, although it should be noted that the sample size was relatively small (n = 26). Overall, although in aggregate a large body of literature examines stressor effects on coral reefs and coral

  20. The role of turtles as coral reef macroherbivores

    KAUST Repository

    Goatley, Christopher H. R.

    2012-06-29

    Herbivory is widely accepted as a vital function on coral reefs. To date, the majority of studies examining herbivory in coral reef environments have focused on the roles of fishes and/or urchins, with relatively few studies considering the potential role of macroherbivores in reef processes. Here, we introduce evidence that highlights the potential role of marine turtles as herbivores on coral reefs. While conducting experimental habitat manipulations to assess the roles of herbivorous reef fishes we observed green turtles (Chelonia mydas) and hawksbill turtles (Eretmochelys imbricata) showing responses that were remarkably similar to those of herbivorous fishes. Reducing the sediment load of the epilithic algal matrix on a coral reef resulted in a forty-fold increase in grazing by green turtles. Hawksbill turtles were also observed to browse transplanted thalli of the macroalga Sargassum swartzii in a coral reef environment. These responses not only show strong parallels to herbivorous reef fishes, but also highlight that marine turtles actively, and intentionally, remove algae from coral reefs. When considering the size and potential historical abundance of marine turtles we suggest that these potentially valuable herbivores may have been lost from many coral reefs before their true importance was understood. © 2012 Goatley et al.

  1. The role of turtles as coral reef macroherbivores.

    Directory of Open Access Journals (Sweden)

    Christopher H R Goatley

    Full Text Available Herbivory is widely accepted as a vital function on coral reefs. To date, the majority of studies examining herbivory in coral reef environments have focused on the roles of fishes and/or urchins, with relatively few studies considering the potential role of macroherbivores in reef processes. Here, we introduce evidence that highlights the potential role of marine turtles as herbivores on coral reefs. While conducting experimental habitat manipulations to assess the roles of herbivorous reef fishes we observed green turtles (Chelonia mydas and hawksbill turtles (Eretmochelys imbricata showing responses that were remarkably similar to those of herbivorous fishes. Reducing the sediment load of the epilithic algal matrix on a coral reef resulted in a forty-fold increase in grazing by green turtles. Hawksbill turtles were also observed to browse transplanted thalli of the macroalga Sargassum swartzii in a coral reef environment. These responses not only show strong parallels to herbivorous reef fishes, but also highlight that marine turtles actively, and intentionally, remove algae from coral reefs. When considering the size and potential historical abundance of marine turtles we suggest that these potentially valuable herbivores may have been lost from many coral reefs before their true importance was understood.

  2. Are coral reefs victims of their own past success?

    Science.gov (United States)

    Renema, Willem; Pandolfi, John M; Kiessling, Wolfgang; Bosellini, Francesca R; Klaus, James S; Korpanty, Chelsea; Rosen, Brian R; Santodomingo, Nadiezhda; Wallace, Carden C; Webster, Jody M; Johnson, Kenneth G

    2016-04-01

    As one of the most prolific and widespread reef builders, the staghorn coral Acropora holds a disproportionately large role in how coral reefs will respond to accelerating anthropogenic change. We show that although Acropora has a diverse history extended over the past 50 million years, it was not a dominant reef builder until the onset of high-amplitude glacioeustatic sea-level fluctuations 1.8 million years ago. High growth rates and propagation by fragmentation have favored staghorn corals since this time. In contrast, staghorn corals are among the most vulnerable corals to anthropogenic stressors, with marked global loss of abundance worldwide. The continued decline in staghorn coral abundance and the mounting challenges from both local stress and climate change will limit the coral reefs' ability to provide ecosystem services.

  3. Development and implementation of coral reef biocriteria in U.S. jurisdictions.

    Science.gov (United States)

    Bradley, Patricia; Fisher, William S; Bell, Heidi; Davis, Wayne; Chan, Valerie; LoBue, Charles; Wiltse, Wendy

    2009-03-01

    Coral reefs worldwide are declining at an alarming rate and are under continuous threat from both natural and anthropogenic environmental stressors. Warmer sea temperatures attributed to global climate change and numerous human activities at local scales place these valuable ecosystems at risk. Reefs provide numerous services, including shoreline protection, fishing, tourism and biological diversity, which are lost through physical damage, overfishing, and pollution. Pollution can be controlled under provisions of the Clean Water Act, but these options have not been fully employed to protect coral reefs. No U.S. jurisdiction has implemented coral reef biocriteria, which are narrative or quantitative water quality standards based on the condition of a biological resource or assemblage. The President's Ocean Action Plan directs the U.S. Environmental Protection Agency (EPA) to develop biological assessment methods and biological criteria for evaluating and maintaining the health of coral reef ecosystems. EPA has formed the Coral Reef Biocriteria Working Group (CRBWG) to foster development of coral reef biocriteria through focused research, evaluation and communication among Agency partners and U.S. jurisdictions. Ongoing CRBWG activities include development and evaluation of a rapid bioassessment protocol for application in biocriteria programs; development of a survey design and monitoring strategy for the U.S. Virgin Islands; comprehensive reviews of biocriteria approaches proposed by states and territories; and assembly of data from a variety of monitoring programs for additional metrics. Guidance documents are being prepared to assist U.S. jurisdictions in reaching protective and defensible biocriteria.

  4. Ecological States and the Resilience of Coral Reefs

    Directory of Open Access Journals (Sweden)

    Tim McClanahan

    2002-12-01

    Full Text Available We review the evidence for multiple ecological states and the factors that create ecological resilience in coral reef ecosystems. There are natural differences among benthic communities along gradients of water temperature, light, nutrients, and organic matter associated with upwelling-downwelling and onshore-offshore systems. Along gradients from oligotrophy to eutrophy, plant-animal symbioses tend to decrease, and the abundance of algae and heterotrophic suspension feeders and the ratio of organic to inorganic carbon production tend to increase. Human influences such as fishing, increased organic matter and nutrients, sediments, warm water, and transportation of xenobiotics and diseases are common causes of a large number of recently reported ecological shifts. It is often the interaction of persistent and multiple synergistic disturbances that causes permanent ecological transitions, rather than the succession of individual short-term disturbances. For example, fishing can remove top-level predators, resulting in the ecological release of prey such as sea urchins and coral-eating invertebrates. When sea urchins are not common because of unsuitable habitat, recruitment limitations, and diseases, and when overfishing removes herbivorous fish, frondose brown algae can dominate. Terrigenous sediments carried onto reefs as a result of increased soil erosion largely promote the dominance of turf or articulated green algae. Elevated nutrients and organic matter can increase internal eroders of reef substratum and a mixture of filamentous algae. Local conservation actions that attempt to reduce fishing and terrestrial influences promote the high production of inorganic carbon that is necessary for reef growth. However, global climate change threatens to undermine such actions because of increased bleaching and mortality caused by warm-water anomalies, weakened coral skeletons caused by reduced aragonite availability in reef waters, and increased

  5. Assessing community values for reducing agricultural emissions to improve water quality and protect coral health in the Great Barrier Reef

    Science.gov (United States)

    Rolfe, John; Windle, Jill

    2011-12-01

    Policymakers wanting to increase protection of the Great Barrier Reef from pollutants generated by agriculture need to identify when measures to improve water quality generate benefits to society that outweigh the costs involved. The research reported in this paper makes a contribution in several ways. First, it uses the improved science understanding about the links between management changes and reef health to bring together the analysis of costs and benefits of marginal changes, helping to demonstrate the appropriate way of addressing policy questions relating to reef protection. Second, it uses the scientific relationships to frame a choice experiment to value the benefits of improved reef health, with the results of mixed logit (random parameter) models linking improvements explicitly to changes in "water quality units." Third, the research demonstrates how protection values are consistent across a broader population, with some limited evidence of distance effects. Fourth, the information on marginal costs and benefits that are reported provide policymakers with information to help improve management decisions. The results indicate that while there is potential for water quality improvements to generate net benefits, high cost water quality improvements are generally uneconomic. A major policy implication is that cost thresholds for key pollutants should be set to avoid more expensive water quality proposals being selected.

  6. Benthic buffers and boosters of ocean acidification on coral reefs

    Directory of Open Access Journals (Sweden)

    K. R. N. Anthony

    2013-07-01

    Full Text Available Ocean acidification is a threat to marine ecosystems globally. In shallow-water systems, however, ocean acidification can be masked by benthic carbon fluxes, depending on community composition, seawater residence time, and the magnitude and balance of net community production (NCP and calcification (NCC. Here, we examine how six benthic groups from a coral reef environment on Heron Reef (Great Barrier Reef, Australia contribute to changes in the seawater aragonite saturation state (Ωa. Results of flume studies using intact reef habitats (1.2 m by 0.4 m, showed a hierarchy of responses across groups, depending on CO2 level, time of day and water flow. At low CO2 (350–450 μatm, macroalgae (Chnoospora implexa, turfs and sand elevated Ωa of the flume water by around 0.10 to 1.20 h−1 – normalised to contributions from 1 m2 of benthos to a 1 m deep water column. The rate of Ωa increase in these groups was doubled under acidification (560–700 μatm and high flow (35 compared to 8 cm s−1. In contrast, branching corals (Acropora aspera increased Ωa by 0.25 h−1 at ambient CO2 (350–450 μatm during the day, but reduced Ωa under acidification and high flow. Nighttime changes in Ωa by corals were highly negative (0.6–0.8 h−1 and exacerbated by acidification. Calcifying macroalgae (Halimeda spp. raised Ωa by day (by around 0.13 h−1, but lowered Ωa by a similar or higher amount at night. Analyses of carbon flux contributions from benthic communities with four different compositions to the reef water carbon chemistry across Heron Reef flat and lagoon indicated that the net lowering of Ωa by coral-dominated areas can to some extent be countered by long water-residence times in neighbouring areas dominated by turfs, macroalgae and carbonate sand.

  7. Coral Reef and Hardbottom from Unified Florida Reef Tract Map (NODC Accession 0123059)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset is a subset of the Unified Map representing Coral reef and Hardbottom areas. Version 1.1 - December 2013. The Unified Florida Reef Tract Map (Unified...

  8. Coral mortality in reefs: The cause and effect; A central concern for reef monitoring

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.

    are destructive and long-lasting. The coral reef monitoring programme therefore aims at identifying reefs in various localities inorder to monitor them for various diseases and hence evolve strategies to eliminate the causes of diseases...

  9. Water velocity dependence of phosphate uptake on a coral-dominated fringing reef flat, La Réunion Island, Indian Ocean

    Science.gov (United States)

    Cuet, P.; Pierret, C.; Cordier, E.; Atkinson, M. J.

    2011-06-01

    Phosphate uptake (P-uptake) into coral reef communities has been hypothesized to be mass-transfer limited. One method of demonstrating mass-transfer limitation of P-uptake is to show dependence of P-uptake on water velocity. Water velocity across reef flats varies with tides and swell; thus, we measured P-uptake over the entire reef flat on eight different days, representing a range in water velocities. P-uptake was calculated from changes in P concentration of the water column. Changes in P concentration were measured by water sampling at six sites along a 300-m cross-reef transect while simultaneously measuring water velocity. To smooth the variability in phosphate concentrations, peristaltic pumps were used to get time-integrated water samples for 4-6 h at each site. Water velocities were measured in the middle of the transect using an acoustic Doppler current profiler and were averaged to match the time-integrated water sampling. Depth-averaged cross-reef water velocities were 0.031 ± 0.013 m s-1 (mean ± SD), while the root-mean-square water velocities, accounting for oscillatory flow, averaged 3.3 times higher, 0.101 ± 0.021 m s-1 (mean ± SD). Phosphate decreased along all transects. The first-order rate constant for P-uptake (S) was 8.5 ± 2.4 m d-1 (mean ± SD) and increased linearly with root-mean-square water velocity. The Stanton number derived from oscillatory flow, the ratio of the first-order rate constant for P-uptake to the root-mean-square water velocity ( S/ U rms), was (9.4 ± 1.2) × 10-4 (mean ± SD). P-uptake ranged from 0.2 to 1.1 mmol P m-2 d-1, demonstrating that P-uptake is variable on short time scales and is directly related to P concentration and water velocity.

  10. The wicked problem of China's disappearing coral reefs.

    Science.gov (United States)

    Hughes, Terry P; Huang, Hui; Young, Matthew A L

    2013-04-01

    We examined the development of coral reef science and the policies, institutions, and governance frameworks for management of coral reefs in China in order to highlight the wicked problem of preserving reefs while simultaneously promoting human development and nation building. China and other sovereign states in the region are experiencing unprecedented economic expansion, rapid population growth, mass migration, widespread coastal development, and loss of habitat. We analyzed a large, fragmented literature on the condition of coral reefs in China and the disputed territories of the South China Sea. We found that coral abundance has declined by at least 80% over the past 30 years on coastal fringing reefs along the Chinese mainland and adjoining Hainan Island. On offshore atolls and archipelagos claimed by 6 countries in the South China Sea, coral cover has declined from an average of >60% to around 20% within the past 10-15 years. Climate change has affected these reefs far less than coastal development, pollution, overfishing, and destructive fishing practices. Ironically, these widespread declines in the condition of reefs are unfolding as China's research and reef-management capacity are rapidly expanding. Before the loss of corals becomes irreversible, governance of China's coastal reefs could be improved by increasing public awareness of declining ecosystem services, by providing financial support for training of reef scientists and managers, by improving monitoring of coral reef dynamics and condition to better inform policy development, and by enforcing existing regulations that could protect coral reefs. In the South China Sea, changes in policy and legal frameworks, refinement of governance structures, and cooperation among neighboring countries are urgently needed to develop cooperative management of contested offshore reefs.

  11. Mangrove habitats provide refuge from climate change for reef-building corals

    Directory of Open Access Journals (Sweden)

    K. K. Yates

    2014-03-01

    Full Text Available Risk analyses indicate that more than 90% of the world's reefs will be threatened by climate change and local anthropogenic impacts by the year 2030 under "business as usual" climate scenarios. Increasing temperatures and solar radiation cause coral bleaching that has resulted in extensive coral mortality. Increasing carbon dioxide reduces seawater pH, slows coral growth, and may cause loss of reef structure. Management strategies include establishment of marine protected areas with environmental conditions that promote reef resiliency. However, few resilient reefs have been identified, and resiliency factors are poorly defined. Here we characterize the first natural, non-reef, coral refuge from thermal stress and ocean acidification and identify resiliency factors for mangrove–coral habitats. We measured diurnal and seasonal variations in temperature, salinity, photosynthetically active radiation (PAR, and seawater chemistry; characterized substrate parameters; and examined water circulation patterns in mangrove communities where scleractinian corals are growing attached to and under mangrove prop roots in Hurricane Hole, St. John, US Virgin Islands. Additionally, we inventoried the coral species and quantified incidences of coral bleaching, mortality and recovery for two major reef-building corals, Colpophyllia natans and Diploria labyrinthiformis, growing in mangrove shaded and exposed (unshaded areas. At least 33 species of scleractinian corals were growing in association with mangroves. Corals were thriving in low-light (more than 70% attenuation of incident PAR from mangrove shading and at higher temperatures than nearby reef tract corals. A higher percentage of C. natans colonies was living shaded by mangroves, and no shaded colonies bleached. Fewer D. labyrinthiformis colonies were shaded by mangroves, however more unshaded colonies bleached. A combination of substrate and habitat heterogeniety, proximity of different habitat types

  12. Mangrove habitats provide refuge from climate change for reef-building corals

    Science.gov (United States)

    Yates, K. K.; Rogers, C. S.; Herlan, J. J.; Brooks, G. R.; Smiley, N. A.; Larson, R. A.

    2014-03-01

    Risk analyses indicate that more than 90% of the world's reefs will be threatened by climate change and local anthropogenic impacts by the year 2030 under "business as usual" climate scenarios. Increasing temperatures and solar radiation cause coral bleaching that has resulted in extensive coral mortality. Increasing carbon dioxide reduces seawater pH, slows coral growth, and may cause loss of reef structure. Management strategies include establishment of marine protected areas with environmental conditions that promote reef resiliency. However, few resilient reefs have been identified, and resiliency factors are poorly defined. Here we characterize the first natural, non-reef, coral refuge from thermal stress and ocean acidification and identify resiliency factors for mangrove-coral habitats. We measured diurnal and seasonal variations in temperature, salinity, photosynthetically active radiation (PAR), and seawater chemistry; characterized substrate parameters; and examined water circulation patterns in mangrove communities where scleractinian corals are growing attached to and under mangrove prop roots in Hurricane Hole, St. John, US Virgin Islands. Additionally, we inventoried the coral species and quantified incidences of coral bleaching, mortality and recovery for two major reef-building corals, Colpophyllia natans and Diploria labyrinthiformis, growing in mangrove shaded and exposed (unshaded) areas. At least 33 species of scleractinian corals were growing in association with mangroves. Corals were thriving in low-light (more than 70% attenuation of incident PAR) from mangrove shading and at higher temperatures than nearby reef tract corals. A higher percentage of C. natans colonies was living shaded by mangroves, and no shaded colonies bleached. Fewer D. labyrinthiformis colonies were shaded by mangroves, however more unshaded colonies bleached. A combination of substrate and habitat heterogeniety, proximity of different habitat types, hydrographic

  13. Acanthaster: effect on coral reef growth in panama.

    Science.gov (United States)

    Glynn, P W

    1973-05-04

    Analysis of data on coral abundance and growth, and the population size (26 individuals per hectare) and feeding rate of Acanthaster indicates that Pocillopora reefs on the Pacific coast of Panama are undergoing vigorous growth in the presence of this predator. Prediction of the effects of a population increase in Acanthaster to plague proportions (2.5 times that presently observed) suggests that reefs could still maintain a positive growth. However, Acanthaster at ten times the present population density would lead to rapid destruction of reefs. It is argued that coral destruction due to Acanthaster represents only one of several factors affecting coral reef progression.

  14. 76 FR 38618 - Proposed Information Collection; Comment Request; Coral Reef Conservation Program Survey

    Science.gov (United States)

    2011-07-01

    ... United States (U.S.) jurisdictions containing coral reefs. Specifically, NOAA is seeking information on... collection of social and economic data related to the communities affected by coral reef conservation programs. The Coral Reef Conservation Program (CRCP), developed under the authority of the Coral Reef...

  15. 77 FR 12567 - Proposed Information Collection; Comment Request; Pacific Islands Region Coral Reef Ecosystems...

    Science.gov (United States)

    2012-03-01

    ... Islands Region Coral Reef Ecosystems Logbook and Reporting AGENCY: National Oceanic and Atmospheric... Special Coral Reef Ecosystem Fishing Permit (authorized under the Fishery Management Plan for Coral Reef... the logbooks is used to obtain fish catch/fishing effort data on coral reef fishes and invertebrates...

  16. Arrecifes de Coral: Una Coleccion de Actividades en Espanol para Estudiantes de Escuela Intermedia (Coral Reefs: A Spanish Compilation of Activities for Middle School Students).

    Science.gov (United States)

    Walker, Sharon H.; Newton, R. Amanda; Ortiz, Alida

    This activity book for middle school students on coral reefs is divided into 10 sections. Section 1 is the introduction. Section 2 describes what coral reefs are while section 3 describes how coral reefs reproduce and grow. Section 4 describes where coral reefs are found, and section 5 describes life on a coral reef. Section 6 describes the…

  17. THE IMPACT OF CDOM PHOTOBLEACHING ON UV ATTENUATION NEAR CORAL REEFS IN THE FLORIDA KEYS

    Science.gov (United States)

    We have investigated how the loss of chromophoric dissolved organic matter (CDOM) in the water column due to photobleaching allows for increased penetration of UV radiation near coral reefs in the Florida Keys. Extended exposure to UV may contribute to coral bleaching episodes. C...

  18. Ecological aspects of the distribution of reef corals in the Netherlands Antilles

    NARCIS (Netherlands)

    Bak, Rolf P.M.

    1975-01-01

    The vertical and horizontal patterns of the distribution of corals and coral reefs (to a depth of 90 m) are discussed in relation to the environmental factors: geomorphology of the bottom, available substrate, light, turbidity, sedimentation, water movement and temperature. There is a general

  19. Ecological aspects of the distribution of reef corals in the Netherlands Antilles

    NARCIS (Netherlands)

    Bak, Rolf P.M.

    1975-01-01

    The vertical and horizontal patterns of the distribution of corals and coral reefs (to a depth of 90 m) are discussed in relation to the environmental factors: geomorphology of the bottom, available substrate, light, turbidity, sedimentation, water movement and temperature. There is a general patter

  20. Effects of seawater acidification on a coral reef meiofauna community

    Science.gov (United States)

    Sarmento, V. C.; Souza, T. P.; Esteves, A. M.; Santos, P. J. P.

    2015-09-01

    Despite the increasing risk that ocean acidification will modify benthic communities, great uncertainty remains about how this impact will affect the lower trophic levels, such as members of the meiofauna. A mesocosm experiment was conducted to investigate the effects of water acidification on a phytal meiofauna community from a coral reef. Community samples collected from the coral reef subtidal zone (Recife de Fora Municipal Marine Park, Porto Seguro, Bahia, Brazil), using artificial substrate units, were exposed to a control pH (ambient seawater) and to three levels of seawater acidification (pH reductions of 0.3, 0.6, and 0.9 units below ambient) and collected after 15 and 30 d. After 30 d of exposure, major changes in the structure of the meiofauna community were observed in response to reduced pH. The major meiofauna groups showed divergent responses to acidification. Harpacticoida and Polychaeta densities did not show significant differences due to pH. Nematoda, Ostracoda, Turbellaria, and Tardigrada exhibited their highest densities in low-pH treatments (especially at the pH reduction of 0.6 units, pH 7.5), while harpacticoid nauplii were strongly negatively affected by low pH. This community-based mesocosm study supports previous suggestions that ocean acidification induces important changes in the structure of marine benthic communities. Considering the importance of meiofauna in the food web of coral reef ecosystems, the results presented here demonstrate that the trophic functioning of coral reefs is seriously threatened by ocean acidification.

  1. Herbivore space use influences coral reef recovery.

    Science.gov (United States)

    Eynaud, Yoan; McNamara, Dylan E; Sandin, Stuart A

    2016-06-01

    Herbivores play an important role in marine communities. On coral reefs, the diversity and unique feeding behaviours found within this functional group can have a comparably diverse set of impacts in structuring the benthic community. Here, using a spatially explicit model of herbivore foraging, we explore how the spatial pattern of grazing behaviours impacts the recovery of a reef ecosystem, considering movements at two temporal scales-short term (e.g. daily foraging patterns) and longer term (e.g. monthly movements across the landscape). Model simulations suggest that more spatially constrained herbivores are more effective at conferring recovery capability by providing a favourable environment to coral recruitment and growth. Results also show that the composition of food available to the herbivore community is linked directly to the pattern of space use by herbivores. To date, most studies of variability among the impacts of herbivore species have considered the diversity of feeding modes and mouthparts. Our work provides a complementary view of spatial patterns of foraging, revealing that variation in movement behaviours alone can affect patterns of benthic change, and thus broadens our view of realized links between herbivore diversity and reef recovery.

  2. Herbivore space use influences coral reef recovery

    Science.gov (United States)

    Eynaud, Yoan; McNamara, Dylan E.; Sandin, Stuart A.

    2016-01-01

    Herbivores play an important role in marine communities. On coral reefs, the diversity and unique feeding behaviours found within this functional group can have a comparably diverse set of impacts in structuring the benthic community. Here, using a spatially explicit model of herbivore foraging, we explore how the spatial pattern of grazing behaviours impacts the recovery of a reef ecosystem, considering movements at two temporal scales—short term (e.g. daily foraging patterns) and longer term (e.g. monthly movements across the landscape). Model simulations suggest that more spatially constrained herbivores are more effective at conferring recovery capability by providing a favourable environment to coral recruitment and growth. Results also show that the composition of food available to the herbivore community is linked directly to the pattern of space use by herbivores. To date, most studies of variability among the impacts of herbivore species have considered the diversity of feeding modes and mouthparts. Our work provides a complementary view of spatial patterns of foraging, revealing that variation in movement behaviours alone can affect patterns of benthic change, and thus broadens our view of realized links between herbivore diversity and reef recovery. PMID:27429784

  3. The influence of coral reefs and climate change on wave-driven flooding of tropical coastlines

    Science.gov (United States)

    Quataert, Ellen; Storlazzi, Curt; van Rooijen, Arnold; van Dongeren, Ap; Cheriton, Olivia

    2015-01-01

    A numerical model, XBeach, calibrated and validated on field data collected at Roi-Namur Island on Kwajalein Atoll in the Republic of Marshall Islands, was used to examine the effects of different coral reef characteristics on potential coastal hazards caused by wave-driven flooding and how these effects may be altered by projected climate change. The results presented herein suggest that coasts fronted by relatively narrow reefs with steep fore reef slopes (~1:10 and steeper) and deeper, smoother reef flats are expected to experience the highest wave runup. Wave runup increases for higher water levels (sea level rise), higher waves, and lower bed roughness (coral degradation), which are all expected effects of climate change. Rising sea levels and climate change will therefore have a significant negative impact on the ability of coral reefs to mitigate the effects of coastal hazards in the future.

  4. Ecological characteristics of coral patch reefs at Midway Atoll, Northwestern Hawaiian Islands

    Science.gov (United States)

    Schroeder, R.E.; Parrish, J.D.

    2006-01-01

    Ecological aspects of coral patch reefs were studied from 1981 to 1985 in Welles Harbor, Midway Atoll. Water temperatures varied from 17??C in February to 28??C in August. Sizes of reefs studied were described by mean area (59 m2), mean volume (52 m3), vertical relief (different sizes of patch reefs. Daily surveillance for presence of large transient taxa suggested that visits by sharks, large jacks, monk seals, sea turtles, and dolphins were infrequent. Density estimates were made for all conspicuous invertebrate megafauna during initial and final assessments. Six common taxa provided 90% of these counts; nearly half were sea urchins. Percent cover also was recorded for coral and algal species on the patch reefs. Cover by live coral was low (about 7%) and dominated by a few species. Mean algal cover ranged from 32 to 77%. Such information on ecological characteristics of reefs may aid in understanding complex ecological processes and provides an earlier reference for current ecosystem studies.

  5. THE CONDITION OF CORAL REEFS IN SOUTH FLORIDA (2000) USING CORAL DISEASE AND BLEACHING AS INDICATORS

    Science.gov (United States)

    The destruction for coral reef habitats is occurring at unprecedented levels. Coral disease epizootics in the Southwestern Atlantic have lead to coral replacement by turf algae, prompting a call to classify some coral species as endangered. In addition, a massive bleaching event ...

  6. THE CONDITION OF CORAL REEFS IN SOUTH FLORIDA (2000) USING CORAL DISEASE AND BLEACHING AS INDICATORS

    Science.gov (United States)

    The destruction for coral reef habitats is occurring at unprecedented levels. Coral disease epizootics in the Southwestern Atlantic have lead to coral replacement by turf algae, prompting a call to classify some coral species as endangered. In addition, a massive bleaching event ...

  7. Drivers and predictions of coral reef carbonate budget trajectories

    Science.gov (United States)

    Graham, Nicholas A. J.; Jennings, Simon; Perry, Chris T.

    2017-01-01

    Climate change is one of the greatest threats to the long-term maintenance of coral-dominated tropical ecosystems, and has received considerable attention over the past two decades. Coral bleaching and associated mortality events, which are predicted to become more frequent and intense, can alter the balance of different elements that are responsible for coral reef growth and maintenance. The geomorphic impacts of coral mass mortality have received relatively little attention, particularly questions concerning temporal recovery of reef carbonate production and the factors that promote resilience of reef growth potential. Here, we track the biological carbonate budgets of inner Seychelles reefs from 1994 to 2014, spanning the 1998 global bleaching event when these reefs lost more than 90% of coral cover. All 21 reefs had positive budgets in 1994, but in 2005 budgets were predominantly negative. By 2014, carbonate budgets on seven reefs were comparable with 1994, but on all reefs where an ecological regime shift to macroalgal dominance occurred, budgets remained negative through 2014. Reefs with higher massive coral cover, lower macroalgae cover and lower excavating parrotfish biomass in 1994 were more likely to have positive budgets post-bleaching. If mortality of corals from the 2016 bleaching event is as severe as that of 1998, our predictions based on past trends would suggest that six of eight reefs with positive budgets in 2014 would still have positive budgets by 2030. Our results highlight that reef accretion and framework maintenance cannot be assumed from the ecological state alone, and that managers should focus on conserving aspects of coral reefs that support resilient carbonate budgets. PMID:28123092

  8. Drivers and predictions of coral reef carbonate budget trajectories.

    Science.gov (United States)

    Januchowski-Hartley, Fraser A; Graham, Nicholas A J; Wilson, Shaun K; Jennings, Simon; Perry, Chris T

    2017-01-25

    Climate change is one of the greatest threats to the long-term maintenance of coral-dominated tropical ecosystems, and has received considerable attention over the past two decades. Coral bleaching and associated mortality events, which are predicted to become more frequent and intense, can alter the balance of different elements that are responsible for coral reef growth and maintenance. The geomorphic impacts of coral mass mortality have received relatively little attention, particularly questions concerning temporal recovery of reef carbonate production and the factors that promote resilience of reef growth potential. Here, we track the biological carbonate budgets of inner Seychelles reefs from 1994 to 2014, spanning the 1998 global bleaching event when these reefs lost more than 90% of coral cover. All 21 reefs had positive budgets in 1994, but in 2005 budgets were predominantly negative. By 2014, carbonate budgets on seven reefs were comparable with 1994, but on all reefs where an ecological regime shift to macroalgal dominance occurred, budgets remained negative through 2014. Reefs with higher massive coral cover, lower macroalgae cover and lower excavating parrotfish biomass in 1994 were more likely to have positive budgets post-bleaching. If mortality of corals from the 2016 bleaching event is as severe as that of 1998, our predictions based on past trends would suggest that six of eight reefs with positive budgets in 2014 would still have positive budgets by 2030. Our results highlight that reef accretion and framework maintenance cannot be assumed from the ecological state alone, and that managers should focus on conserving aspects of coral reefs that support resilient carbonate budgets. © 2017 The Authors.

  9. Coral community response to bleaching on a highly disturbed reef

    OpenAIRE

    Guest, J R; Low, J; Tun, K.; Wilson, B.; Ng, C.; D. Raingeard; Ulstrup, K. E.; Tanzil, J.T.I.; P. A. Todd; T. C. Toh; McDougald, D.; Chou, L.M.; Steinberg, P D

    2016-01-01

    While many studies of coral bleaching report on broad, regional scale responses, fewer examine variation in susceptibility among coral taxa and changes in community structure, before, during and after bleaching on individual reefs. Here we report in detail on the response to bleaching by a coral community on a highly disturbed reef site south of mainland Singapore before, during and after a major thermal anomaly in 2010. To estimate the capacity for resistance to thermal stress, we report on:...

  10. Coral community response to bleaching on a highly disturbed reef

    OpenAIRE

    Guest, J R; Low, J.; Tun, K.; B. Wilson; Ng, C.; Raingeard, D.; K. E. Ulstrup; Tanzil, J. T. I.; Todd, P.A.; Toh, T. C.; McDougald, D; Chou, L.M.; P. D. Steinberg

    2016-01-01

    While many studies of coral bleaching report on broad, regional scale responses, fewer examine variation in susceptibility among coral taxa and changes in community structure, before, during and after bleaching on individual reefs. Here we report in detail on the response to bleaching by a coral community on a highly disturbed reef site south of mainland Singapore before, during and after a major thermal anomaly in 2010. To estimate the capacity for resistance to thermal stress, we report on:...

  11. The role of deep reefs in shallow reef recovery: an assessment of vertical connectivity in a brooding coral from west and east Australia.

    Science.gov (United States)

    van Oppen, Madeleine J H; Bongaerts, Pim; Underwood, Jim N; Peplow, Lesa M; Cooper, Timothy F

    2011-04-01

    Approximately one quarter of zooxanthellate coral species have a depth distribution from shallow waters (coral bleaching. This has led to the hypothesis that deep populations may serve as refuges and a source of recruits for shallow reef habitats. The extent of vertical connectivity of reef coral species, however, is largely unquantified. Using 10 coral host microsatellite loci and sequences of the host mtDNA putative control region, as well as ribosomal DNA (rDNA) ITS2 sequences of the coral's algal endosymbionts (Symbiodinium), we examine population structure, connectivity and symbiont specificity in the brooding coral Seriatopora hystrix across a depth profile in both northwest (Scott Reef) and northeast Australia (Yonge Reef). Strong genetic structuring over depth was observed in both regions based on the microsatellite loci; however, Yonge Reef exhibited an additional partitioning of mtDNA lineages (associated with specific symbiont ITS2 types), whereas Scott Reef was dominated by a single mtDNA lineage (with no apparent host-symbiont specificity). Evidence for recruitment of larvae of deep water origin into shallow habitats was found at Scott Reef, suggesting that recovery of shallow water habitats may be aided by migration from deep water refuges. Conversely, no migration from the genetically divergent deep slope populations into the shallow habitats was evident at Yonge Reef, making recovery of shallow habitats from deeper waters at this location highly unlikely.

  12. Could some coral reefs become sponge reefs as our climate changes?

    Science.gov (United States)

    Bell, James J; Davy, Simon K; Jones, Timothy; Taylor, Michael W; Webster, Nicole S

    2013-09-01

    Coral reefs across the world have been seriously degraded and have a bleak future in response to predicted global warming and ocean acidification (OA). However, this is not the first time that biocalcifying organisms, including corals, have faced the threat of extinction. The end-Triassic mass extinction (200 million years ago) was the most severe biotic crisis experienced by modern marine invertebrates, which selected against biocalcifiers; this was followed by the proliferation of another invertebrate group, sponges. The duration of this sponge-dominated period far surpasses that of alternative stable-ecosystem or phase-shift states reported on modern day coral reefs and, as such, a shift to sponge-dominated reefs warrants serious consideration as one future trajectory of coral reefs. We hypothesise that some coral reefs of today may become sponge reefs in the future, as sponges and corals respond differently to changing ocean chemistry and environmental conditions. To support this hypothesis, we discuss: (i) the presence of sponge reefs in the geological record; (ii) reported shifts from coral- to sponge-dominated systems; and (iii) direct and indirect responses of the sponge holobiont and its constituent parts (host and symbionts) to changes in temperature and pH. Based on this evidence, we propose that sponges may be one group to benefit from projected climate change and ocean acidification scenarios, and that increased sponge abundance represents a possible future trajectory for some coral reefs, which would have important implications for overall reef functioning. © 2013 John Wiley & Sons Ltd.

  13. Benthic buffers and boosters of ocean acidification on coral reefs

    Directory of Open Access Journals (Sweden)

    K. R. N. Anthony

    2013-02-01

    Full Text Available Ocean acidification is a threat to marine ecosystems globally. In shallow-water systems, however, ocean acidification can be masked by benthic carbon fluxes, depending on community composition, seawater residence time, and the magnitude and balance of net community production (pn and calcification (gn. Here, we examine how six benthic groups from a coral reef environment on Heron Reef (Great Barrier Reef, Australia contribute to changes in seawater aragonite saturation state (Ωa. Results of flume studies showed a hierarchy of responses across groups, depending on CO2 level, time of day and water flow. At low CO2 (350–450 μatm, macroalgae (Chnoospora implexa, turfs and sand elevated Ωa of the flume water by around 0.10 to 1.20 h−1 – normalised to contributions from 1 m2 of benthos to a 1 m deep water column. The rate of Ωa increase in these groups was doubled under acidification (560–700 μatm and high flow (35 compared to 8 cm s−1. In contrast, branching corals (Acropora aspera increased Ωa by 0.25 h−1 at ambient CO2 (350–450 μatm during the day, but reduced Ωa under acidification and high flow. Nighttime changes in Ωa by corals were highly negative (0.6–0.8 h−1 and exacerbated by acidification. Calcifying macroalgae (Halimeda spp. raised Ωa by day (by around 0.13 h−1, but lowered Ωa by a similar or higher amount at night. Analyses of carbon flux contributions from four different benthic compositions to the reef water carbon chemistry across Heron Reef flat and lagoon indicated that the net lowering of Ωa by coral-dominated areas can to some extent be countered by long water residence times in neighbouring areas dominated by turfs, macroalgae and potentially sand.

  14. Relationships between structural complexity, coral traits, and reef fish assemblages

    Science.gov (United States)

    Darling, Emily S.; Graham, Nicholas A. J.; Januchowski-Hartley, Fraser A.; Nash, Kirsty L.; Pratchett, Morgan S.; Wilson, Shaun K.

    2017-06-01

    With the ongoing loss of coral cover and the associated flattening of reef architecture, understanding the links between coral habitat and reef fishes is of critical importance. Here, we investigate whether considering coral traits and functional diversity provides new insights into the relationship between structural complexity and reef fish communities, and whether coral traits and community composition can predict structural complexity. Across 157 sites in Seychelles, Maldives, the Chagos Archipelago, and Australia's Great Barrier Reef, we find that structural complexity and reef zone are the strongest and most consistent predictors of reef fish abundance, biomass, species richness, and trophic structure. However, coral traits, diversity, and life histories provided additional predictive power for models of reef fish assemblages, and were key drivers of structural complexity. Our findings highlight that reef complexity relies on living corals—with different traits and life histories—continuing to build carbonate skeletons, and that these nuanced relationships between coral assemblages and habitat complexity can affect the structure of reef fish assemblages. Seascape-level estimates of structural complexity are rapid and cost effective with important implications for the structure and function of fish assemblages, and should be incorporated into monitoring programs.

  15. Do tabular corals constitute keystone structures for fishes on coral reefs?

    Science.gov (United States)

    Kerry, J. T.; Bellwood, D. R.

    2015-03-01

    This study examined the changes in community composition of reef fishes by experimentally manipulating the availability of shelter provided by tabular structures on a mid-shelf reef on the Great Barrier Reef. At locations where access to tabular corals ( Acropora hyacinthus and Acropora cytherea) was excluded, a rapid and sustained reduction in the abundance of large reef fishes occurred. At locations where tabular structure was added, the abundance and diversity of large reef fishes increased and the abundance of small reef fishes tended to decrease, although over a longer time frame. Based on their response to changes in the availability of tabular structures, nine families of large reef fishes were separated into three categories; designated as obligate, facultative or non-structure users. This relationship may relate to the particular ecological demands of each family, including avoidance of predation and ultraviolet radiation, access to feeding areas and reef navigation. This study highlights the importance of tabular corals for large reef fishes in shallow reef environments and provides a possible mechanism for local changes in the abundance of reef fishes following loss of structural complexity on coral reefs. Keystone structures have a distinct structure and disproportionate effect on their ecosystem relative to their abundance, as such the result of this study suggests tabular corals may constitute keystone structures on shallow coral reefs.

  16. Understanding coral reefs in an impacted world: Physiological responses of coral reef organisms to coastal pollution and global warming

    OpenAIRE

    Kegler, Pia

    2015-01-01

    Coral reefs are facing a multitude of anthropogenic disturbances at ever higher frequencies and magnitudes. As a consequence, these ecologically and economically important ecosystems are degrading worldwide. Reef managers lack knowledge on how fish, corals and coral larvae respond to the effects of local and global stressors. This thesis reveals the significance of chemical pollution from localized sources. Two common pollutants (diesel and a surfactant) caused metabolic changes in a fish and...

  17. Community structure of coral reefs on opposite sides of the isthmus of panama.

    Science.gov (United States)

    Portfr, J W

    1974-11-08

    Competition for space amon reef corals includes interspecific destruction by extracoelenteric digestion., rapid growth. and Overtopping. No Caribbean species excela in all strategies, and on western Caribbean coral reefs there is a positive correlation between coral abudance and diversity. On eastern Pacific coral reefs, however. Pocillopora damicornis excludes other corals, and on these reefs there is an inverse relation between coral abundance and diversity, except in areas where distrubances, such as Acanthaster predation offset space monopolization.

  18. Sediment and turbidity associated with offshore dredging increase coral disease prevalence on nearby reefs.

    Directory of Open Access Journals (Sweden)

    F Joseph Pollock

    Full Text Available In recent decades, coral reef ecosystems have declined to the extent that reefs are now threatened globally. While many water quality parameters have been proposed to contribute to reef declines, little evidence exists conclusively linking specific water quality parameters with increased disease prevalence in situ. Here we report evidence from in situ coral health surveys confirming that chronic exposure to dredging-associated sediment plumes significantly increase the prevalence of white syndromes, a devastating group of globally important coral diseases. Coral health surveys were conducted along a dredging-associated sediment plume gradient to assess the relationship between sedimentation, turbidity and coral health. Reefs exposed to the highest number of days under the sediment plume (296 to 347 days had two-fold higher levels of disease, largely driven by a 2.5-fold increase in white syndromes, and a six-fold increase in other signs of compromised coral health relative to reefs with little or no plume exposure (0 to 9 days. Multivariate modeling and ordination incorporating sediment exposure level, coral community composition and cover, predation and multiple thermal stress indices provided further confirmation that sediment plume exposure level was the main driver of elevated disease and other compromised coral health indicators. This study provides the first evidence linking dredging-associated sedimentation and turbidity with elevated coral disease prevalence in situ. Our results may help to explain observed increases in global coral disease prevalence in recent decades and suggest that minimizing sedimentation and turbidity associated with coastal development will provide an important management tool for controlling coral disease epizootics.

  19. UNMIXING-BASED DENOISING AS A PRE-PROCESSING STEP FOR CORAL REEF ANALYSIS

    Directory of Open Access Journals (Sweden)

    D. Cerra

    2017-05-01

    Full Text Available Coral reefs, among the world’s most biodiverse and productive submerged habitats, have faced several mass bleaching events due to climate change during the past 35 years. In the course of this century, global warming and ocean acidification are expected to cause corals to become increasingly rare on reef systems. This will result in a sharp decrease in the biodiversity of reef communities and carbonate reef structures. Coral reefs may be mapped, characterized and monitored through remote sensing. Hyperspectral images in particular excel in being used in coral monitoring, being characterized by very rich spectral information, which results in a strong discrimination power to characterize a target of interest, and separate healthy corals from bleached ones. Being submerged habitats, coral reef systems are difficult to analyse in airborne or satellite images, as relevant information is conveyed in bands in the blue range which exhibit lower signal-to-noise ratio (SNR with respect to other spectral ranges; furthermore, water is absorbing most of the incident solar radiation, further decreasing the SNR. Derivative features, which are important in coral analysis, result greatly affected by the resulting noise present in relevant spectral bands, justifying the need of new denoising techniques able to keep local spatial and spectral features. In this paper, Unmixing-based Denoising (UBD is used to enable analysis of a hyperspectral image acquired over a coral reef system in the Red Sea based on derivative features. UBD reconstructs pixelwise a dataset with reduced noise effects, by forcing each spectrum to a linear combination of other reference spectra, exploiting the high dimensionality of hyperspectral datasets. Results show clear enhancements with respect to traditional denoising methods based on spatial and spectral smoothing, facilitating the coral detection task.

  20. Unmixing-Based Denoising as a Pre-Processing Step for Coral Reef Analysis

    Science.gov (United States)

    Cerra, D.; Traganos, D.; Gege, P.; Reinartz, P.

    2017-05-01

    Coral reefs, among the world's most biodiverse and productive submerged habitats, have faced several mass bleaching events due to climate change during the past 35 years. In the course of this century, global warming and ocean acidification are expected to cause corals to become increasingly rare on reef systems. This will result in a sharp decrease in the biodiversity of reef communities and carbonate reef structures. Coral reefs may be mapped, characterized and monitored through remote sensing. Hyperspectral images in particular excel in being used in coral monitoring, being characterized by very rich spectral information, which results in a strong discrimination power to characterize a target of interest, and separate healthy corals from bleached ones. Being submerged habitats, coral reef systems are difficult to analyse in airborne or satellite images, as relevant information is conveyed in bands in the blue range which exhibit lower signal-to-noise ratio (SNR) with respect to other spectral ranges; furthermore, water is absorbing most of the incident solar radiation, further decreasing the SNR. Derivative features, which are important in coral analysis, result greatly affected by the resulting noise present in relevant spectral bands, justifying the need of new denoising techniques able to keep local spatial and spectral features. In this paper, Unmixing-based Denoising (UBD) is used to enable analysis of a hyperspectral image acquired over a coral reef system in the Red Sea based on derivative features. UBD reconstructs pixelwise a dataset with reduced noise effects, by forcing each spectrum to a linear combination of other reference spectra, exploiting the high dimensionality of hyperspectral datasets. Results show clear enhancements with respect to traditional denoising methods based on spatial and spectral smoothing, facilitating the coral detection task.

  1. Simulations of long-term community dynamics in coral reefs--how perturbations shape trajectories.

    Directory of Open Access Journals (Sweden)

    Andreas Kubicek

    Full Text Available Tropical coral reefs feature extraordinary biodiversity and high productivity rates in oligotrophic waters. Due to increasing frequencies of perturbations--anthropogenic and natural--many reefs are under threat. Such perturbations often have devastating effects on these unique ecosystems and especially if they occur simultaneously and amplify each other's impact, they might trigger a phase shift and create irreversible conditions.We developed a generic, spatially explicit, individual-based model in which competition drives the dynamics of a virtual benthic reef community--comprised of scleractinian corals and algae--under different environmental settings. Higher system properties, like population dynamics or community composition arise through self-organization as emergent properties. The model was parameterized for a typical coral reef site at Zanzibar, Tanzania and features coral bleaching and physical disturbance regimes as major sources of perturbations. Our results show that various types and modes (intensities and frequencies of perturbations create diverse outcomes and that the switch from high diversity to single species dominance can be evoked by small changes in a key parameter. Here we extend the understanding of coral reef resilience and the identification of key processes, drivers and respective thresholds, responsible for changes in local situations. One future goal is to provide a tool which may aid decision making processes in management of coral reefs.

  2. National Coral Reef Monitoring Program: Assessment of coral reef communities in U.S. Virgin Islands (USVI) using the Coral Demographics method

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Coral Demographics method is one of two benthic surveys conducted in the U.S. Virgin Islands (USVI) as part of the National Coral Reef Monitoring Program...

  3. Coral Reef Monitoring: From Cytological Parameters to Community Indices

    Directory of Open Access Journals (Sweden)

    Ofer Ben-Tzvi

    2011-01-01

    Full Text Available Sound-ecosystem-based management of coral reefs is largely based on indicators of reef health state. Currently there are various ecological parameters that serve as reef state indices; however, their practical implications are under debate. In the present study we examine an alternative parameter, the deterioration index (DI, which does not purport to replace the traditional indices but can provide a reliable, stand-alone indication of reef state. Patterns of cytological indices, which are considered as reliable indicators of environmental stressors, have been compared to ten selected reef community indices. The DI showed the highest correlations among community indices to the cytological indices in artificial reefs and high correlation in natural reefs as well. Our results suggest that in cases of lacking adequate monitoring abilities where a full set of community indices cannot be obtained, the DI can serve in many cases as the preferred, stand-alone indicator of coral reef state.

  4. Ecosystem-scale effects of aragonite saturation, temperature, and nutrients on coral-reef calcification

    Science.gov (United States)

    Silverman, J.; Caldeira, K.; Lazar, B.; Erez, J.

    2008-12-01

    We investigated the relations between net calcification of an entire coral reef in the northern Red Sea and annual changes in aragonite saturation, temperature, and nutrient loading over a two year period, and augmented this study with similar observations in the Great Barrier Reef, Australia. In the Red Sea, average calcification rates varied between 60 ± 20 and 30 ± 20 mmol m-2 d-1 in the summer and winter, respectively. These changes primarily reflected seasonal differences in aragonite saturation and temperature. Data for the Great Barrier Reef are still being processed. Calcification rates at the ecosystem scale correlated remarkably well with the kinetics observed in inorganic aragonite precipitation experiments. This is a remarkable finding considering that calcification in coral reefs is primarily a biogenic process; this finding is yet to be explained mechanistically. These relationships are also in agreement with most laboratory studies on individual stony corals and coral mesocosms. The consistency of these responses at levels ranging from inorganic kinetics through the ecosystem scale suggests that these relationships are sufficiently robust to make predictions of coral reef response to ocean acidification and global warming. Finally, in a number of nighttime measurements, we observed net aragonite dissolution despite the supersaturated state of overlying reef water. This apparent dissolution is most likely biologically mediated. Aragonite dissolution, combined with decreasing aragonite precipitation, suggests that at least some reefs will be undergoing net dissolution by the time atmospheric carbon dioxide concentration doubles over its pre- industrial value.

  5. Assessment of survival, mortality and recovery of coral reefs of East Kish Island, Persian Gulf.

    Science.gov (United States)

    Jami, M J; Salehduost, A; Negarestan, H

    2010-10-15

    Coral reefs are specialized communities that develop clear, well-lit tropical and subtropical water; they provide shelter and canopy for great variety of organisms, living in mean temperature of 20 degrees C. Coral Bleaching and mortality have been associated with elevated seawater temperature. The aim of the study was to investigate coral bleaching and evaluate health condition of the corals. Distribution of coral reefs around Kish Island was determined by the Timed Swim (TS) technique. This survey carried out in 2 times (May and October, 2009) in 2 depths of 3-5 m and 6-10 m. Two Divers swam in constant speed for a set amount of time in three dive sites. The timed swim survey around the Kish Island showed that the most healthy live hard coral assemblages were found in the site called Persian Gulf seaport, whereas the greatest percentage of bleached corals were located in Jurassic Park station, located at the southeast of the Island. Branching corals (Acropora sp.) were bleached among all 3 stations and no sign of recovery could be detected. In Big coral site suitable substrate for accumulation of living organisms including Echinometra mathaie (sea urchin) existed due to presence of great amount of algae on dead corals and rocks. Based on the observation, it seems that the cause of reef destruction in Kish Island fall in to two categories, natural and human impacts.

  6. Coral diseases and bleaching on Colombian Caribbean coral reefs

    Directory of Open Access Journals (Sweden)

    Raúl Navas-Camacho

    2010-05-01

    Full Text Available Since 1998 the National Monitoring System for the Coral Reefs of Colombia (SIMAC has monitored the occurrence of coral bleaching and diseases in some Colombian coral reefs (permanent stations at San Andres Island, Rosario Islands, Tayrona, San Bernardo Islands and Urabá. The main purpose is to evaluate their health status and to understand the factors that have been contributing to their decline. To estimate these occurrences, annual surveys in 126 permanent belt transects (10x2m with different depth intervals (3-6 meters, 9-12 meters and 15-18 meters are performed at all reef sites. Data from the 1998-2004 period, revealed that San Andrés Island had many colonies with diseases (38.9 colonies/m2, and Urabá had high numbers with bleaching (54.4 colonies/m2. Of the seven reported coral diseases studied, Dark Spots Disease (DSD, and White Plague Disease (WPD were noteworthy because they occurred in all Caribbean monitored sites, and because of their high interannual infection incidence. Thirty five species of scleractinian corals were affected by at least one disease and a high incidence of coral diseases on the main reef builders is documented. Bleaching was present in 34 species. During the whole monitoring period, Agaricia agaricites and Siderastrea siderea were the species most severely affected by DSD and bleaching, respectively. Diseases on species such as Agaricia fragilis, A.grahamae, A. humilis, Diploria clivosa, Eusmilia fastigiata, Millepora complanata, and Mycetophyllia aliciae are recorded for first time in Colombia. We present bleaching and disease incidences, kinds of diseases, coral species affected, reef localities studied, depth intervals of surveys, and temporal (years variation for each geographic area. This variation makes difficult to clearly determine defined patterns or general trends for monitored reefs. This is the first long-term study of coral diseases and bleaching in the Southwestern Caribbean, and one of the few

  7. Recovery of an isolated coral reef system following severe disturbance.

    Science.gov (United States)

    Gilmour, James P; Smith, Luke D; Heyward, Andrew J; Baird, Andrew H; Pratchett, Morgan S

    2013-04-05

    Coral reef recovery from major disturbance is hypothesized to depend on the arrival of propagules from nearby undisturbed reefs. Therefore, reefs isolated by distance or current patterns are thought to be highly vulnerable to catastrophic disturbance. We found that on an isolated reef system in north Western Australia, coral cover increased from 9% to 44% within 12 years of a coral bleaching event, despite a 94% reduction in larval supply for 6 years after the bleaching. The initial increase in coral cover was the result of high rates of growth and survival of remnant colonies, followed by a rapid increase in juvenile recruitment as colonies matured. We show that isolated reefs can recover from major disturbance, and that the benefits of their isolation from chronic anthropogenic pressures can outweigh the costs of limited connectivity.

  8. Coral reef destruction of Small island in 44 years and destructive fishing in Spermonde Archipelago, Indonesia

    Science.gov (United States)

    Nurdin, Nurjannah; Komatsu, Teruhisa; Rani, Chair; Supriadi; Fakhriyyah, Sitti; Agus

    2016-11-01

    Coral reefs are among the most diverse and threatened ecosystems on the planet. The most commonly stated for developing coral reef remote sensing techniques is to asses and or to monitor the status of these ecosystems. The study site was selected one of small island in inner zone Spermonde archipelago, Indonesia. We used Landsat MSS, Landsat TM, Landsat ETM, and Landsat OLI data to examine changes in the coral reefs of inner zone island in the Spermonde Archipelago from 1972 to 2016. The image processing are gap fills, atmospheric correction, geometric corrections, image composites, water column corrections, unsupervised classifications, and reclassification. Some of component change detection procedure was applied to define change. The results showed significant changes in 44 years. Disturbed coral reefs are typically characterized by loss of coral cover by increase in the abundance of dead corals and rubble. Local factors such as destructive fishing is direct destruction of inner zone island. While the impact of local threats may be reduced through management action, global threats to coral reefs are likely to increase in severity in the coming years.

  9. Ocean acidification accelerates dissolution of experimental coral reef communities

    Directory of Open Access Journals (Sweden)

    S. Comeau

    2014-08-01

    Full Text Available Ocean acidification (OA poses a severe threat to tropical coral reefs, yet much of what is know about these effects comes from individual corals and algae incubated in isolation under high pCO2. Studies of similar effects on coral reef communities are scarce. To investigate the response of coral reef communities to OA, we used large outdoor flumes in which communities composed of calcified algae, corals, and sediment were combined to match the percentage cover of benthic communities in the shallow back reef of Moorea, French Polynesia. Reef communities in the flumes were exposed to ambient (~400 μatm and high pCO2 (~1300 μatm for 8 weeks, and calcification rates measured for the constructed communities including the sediments. Community calcification was depressed 59% under high pCO2, with sediment dissolution explaining ~50% of this decrease; net calcification of corals and calcified algae remained positive, but was reduced 29% under elevated pCO2. These results show that despite the capacity of coral reef calcifiers to maintain positive net accretion of calcium carbonate under OA conditions, reef communities might switch to net dissolution as pCO2 increases, particularly at night, due to enhanced sediment dissolution.

  10. Status and conservation of coral reefs in Costa Rica.

    Science.gov (United States)

    Cortés, Jorge; Jiménez, Carlos E; Fonseca, Ana C; Alvarado, Juan José

    2010-05-01

    Costa Rica has coral communities and reefs on the Caribbean coast and on the Pacific along the coast and off-shore islands. The Southern section of the Caribbean coast has fringing and patch reefs, carbonate banks, and an incipient algal ridge. The Pacific coast has coral communities, reefs and isolated coral colonies. Coral reefs have been seriously impacted in the last 30 years, mainly by sediments (Caribbean coast and some Pacific reefs) and by El Niño warming events (both coasts). Monitoring is being carried out at three sites on each coast. Both coasts suffered significant reductions in live coral cover in the 1980's, but coral cover is now increasing in most sites. The government of Costa Rica is aware of the importance of coral reefs and marine environments in general, and in recent years decrees have been implemented (or are in the process of approval) to protect them, but limited resources endanger their proper management and conservation, including proper outreach to reef users and the general public.

  11. Unseen players shape benthic competition on coral reefs.

    Science.gov (United States)

    Barott, Katie L; Rohwer, Forest L

    2012-12-01

    Recent work has shown that hydrophilic and hydrophobic organic matter (OM) from algae disrupts the function of the coral holobiont and promotes the invasion of opportunistic pathogens, leading to coral morbidity and mortality. Here we refer to these dynamics as the (3)DAM [dissolved organic matter (DOM), direct contact, disease, algae and microbes] model. There is considerable complexity in coral-algae interactions; turf algae and macroalgae promote heterotrophic microbial overgrowth of coral, macroalgae also directly harm the corals via hydrophobic OM, whereas crustose coralline algae generally encourage benign microbial communities. In addition, complex flow patterns transport OM and pathogens from algae to downstream corals, and direct algal contact enhances their delivery. These invisible players (microbes, viruses, and OM) are important drivers of coral reefs because they have non-linear responses to disturbances and are the first to change in response to perturbations, providing near real-time trajectories for a coral reef, a vital metric for conservation and restoration.

  12. Coral colonisation of an artificial reef in a turbid nearshore environment, Dampier Harbour, western Australia.

    Science.gov (United States)

    Blakeway, David; Byers, Michael; Stoddart, James; Rossendell, Jason

    2013-01-01

    A 0.6 hectare artificial reef of local rock and recycled concrete sleepers was constructed in December 2006 at Parker Point in the industrial port of Dampier, western Australia, with the aim of providing an environmental offset for a nearshore coral community lost to land reclamation. Corals successfully colonised the artificial reef, despite the relatively harsh environmental conditions at the site (annual water temperature range 18-32°C, intermittent high turbidity, frequent cyclones, frequent nearby ship movements). Coral settlement to the artificial reef was examined by terracotta tile deployments, and later stages of coral community development were examined by in-situ visual surveys within fixed 25 x 25 cm quadrats on the rock and concrete substrates. Mean coral density on the tiles varied from 113 ± 17 SE to 909 ± 85 SE per m(2) over five deployments, whereas mean coral density in the quadrats was only 6.0 ± 1.0 SE per m(2) at eight months post construction, increasing to 24.0 ± 2.1 SE per m(2) at 62 months post construction. Coral taxa colonising the artificial reef were a subset of those on the surrounding natural reef, but occurred in different proportions--Pseudosiderastrea tayami, Mycedium elephantotus and Leptastrea purpurea being disproportionately abundant on the artificial reef. Coral cover increased rapidly in the later stages of the study, reaching 2.3 ± 0.7 SE % at 62 months post construction. This study indicates that simple materials of opportunity can provide a suitable substrate for coral recruitment in Dampier Harbour, and that natural colonisation at the study site remains sufficient to initiate a coral community on artificial substrate despite ongoing natural and anthropogenic perturbations.

  13. Coral colonisation of an artificial reef in a turbid nearshore environment, Dampier Harbour, western Australia.

    Directory of Open Access Journals (Sweden)

    David Blakeway

    Full Text Available A 0.6 hectare artificial reef of local rock and recycled concrete sleepers was constructed in December 2006 at Parker Point in the industrial port of Dampier, western Australia, with the aim of providing an environmental offset for a nearshore coral community lost to land reclamation. Corals successfully colonised the artificial reef, despite the relatively harsh environmental conditions at the site (annual water temperature range 18-32°C, intermittent high turbidity, frequent cyclones, frequent nearby ship movements. Coral settlement to the artificial reef was examined by terracotta tile deployments, and later stages of coral community development were examined by in-situ visual surveys within fixed 25 x 25 cm quadrats on the rock and concrete substrates. Mean coral density on the tiles varied from 113 ± 17 SE to 909 ± 85 SE per m(2 over five deployments, whereas mean coral density in the quadrats was only 6.0 ± 1.0 SE per m(2 at eight months post construction, increasing to 24.0 ± 2.1 SE per m(2 at 62 months post construction. Coral taxa colonising the artificial reef were a subset of those on the surrounding natural reef, but occurred in different proportions--Pseudosiderastrea tayami, Mycedium elephantotus and Leptastrea purpurea being disproportionately abundant on the artificial reef. Coral cover increased rapidly in the later stages of the study, reaching 2.3 ± 0.7 SE % at 62 months post construction. This study indicates that simple materials of opportunity can provide a suitable substrate for coral recruitment in Dampier Harbour, and that natural colonisation at the study site remains sufficient to initiate a coral community on artificial substrate despite ongoing natural and anthropogenic perturbations.

  14. Geologic history of Grecian Rocks, Key Largo Coral Reef Marine Sanctuary.

    Science.gov (United States)

    Shinn, E.A.

    1980-01-01

    Two transects were drilled across the major ecologic zones of the c. 750 by 200 m reef, whose accumulation was controlled by a local Pleistocene topographic feature. The Reef is composed of 5 major ecologic zones: 1) a deep seaward rubble zone, 6-8 m depth; 2) a poorly developed spur and groove zone composed of massive head corals and Millepora (4-6 m water depth); 3) a characteristic high-energy oriented Acropora palmata zone extending from the surface down to 4 m; 4) a distinct broad reef flat composed of in situ A. palmata and coral rubble, followed by 5) a narrow low- energy back-reef zone of unoriented A. palmata, thickets of A. cervicornis, and various massive head corals in water 0-3 m deep. An extensive grass-covered carbonate sand flat 3-4 m deep extends in a landward direction from zone 5. - from Author

  15. Impacts of human activities on coral reef ecosystems of southern Taiwan: a long-term study.

    Science.gov (United States)

    Liu, Pi-Jen; Meng, Pei-Jie; Liu, Li-Lian; Wang, Jih-Terng; Leu, Ming-Yih

    2012-06-01

    In July 2001, the National Museum of Marine Biology and Aquarium, co-sponsored by the Kenting National Park Headquarters and Taiwan's National Science Council, launched a Long-Term Ecological Research (LTER) program to monitor anthropogenic impacts on the ecosystems of southern Taiwan, specifically the coral reefs of Kenting National Park (KNP), which are facing an increasing amount of anthropogenic pressure. We found that the seawater of the reef flats along Nanwan Bay, Taiwan's southernmost embayment, was polluted by sewage discharge at certain monitoring stations. Furthermore, the consequently higher nutrient and suspended sediment levels had led to algal blooms and sediment smothering of shallow water corals at some sampling sites. Finally, our results show that, in addition to this influx of anthropogenically-derived sewage, increasing tourist numbers are correlated with decreasing shallow water coral cover, highlighting the urgency of a more proactive management plan for KNP's coral reefs. Copyright © 2012 Elsevier Ltd. All rights reserved.

  16. Poorly cemented coral reefs of the eastern tropical Pacific: possible insights into reef development in a high-CO2 world.

    Science.gov (United States)

    Manzello, Derek P; Kleypas, Joan A; Budd, David A; Eakin, C Mark; Glynn, Peter W; Langdon, Chris

    2008-07-29

    Ocean acidification describes the progressive, global reduction in seawater pH that is currently underway because of the accelerating oceanic uptake of atmospheric CO(2). Acidification is expected to reduce coral reef calcification and increase reef dissolution. Inorganic cementation in reefs describes the precipitation of CaCO(3) that acts to bind framework components and occlude porosity. Little is known about the effects of ocean acidification on reef cementation and whether changes in cementation rates will affect reef resistance to erosion. Coral reefs of the eastern tropical Pacific (ETP) are poorly developed and subject to rapid bioerosion. Upwelling processes mix cool, subthermocline waters with elevated pCO(2) (the partial pressure of CO(2)) and nutrients into the surface layers throughout the ETP. Concerns about ocean acidification have led to the suggestion that this region of naturally low pH waters may serve as a model of coral reef development in a high-CO(2) world. We analyzed seawater chemistry and reef framework samples from multiple reef sites in the ETP and found that a low carbonate saturation state (Omega) and trace abundances of cement are characteristic of these reefs. These low cement abundances may be a factor in the high bioerosion rates previously reported for ETP reefs, although elevated nutrients in upwelled waters may also be limiting cementation and/or stimulating bioerosion. ETP reefs represent a real-world example of coral reef growth in low-Omega waters that provide insights into how the biological-geological interface of coral reef ecosystems will change in a high-CO(2) world.

  17. Mapping coral reefs using consumer-grade drones and structure from motion photogrammetry techniques

    Science.gov (United States)

    Casella, Elisa; Collin, Antoine; Harris, Daniel; Ferse, Sebastian; Bejarano, Sonia; Parravicini, Valeriano; Hench, James L.; Rovere, Alessio

    2017-03-01

    We propose a novel technique to measure the small-scale three-dimensional features of a shallow-water coral reef using a small drone equipped with a consumer-grade camera, a handheld GPS and structure from motion (SfM) algorithms. We used a GoPro HERO4 with a modified lens mounted on a DJI Phantom 2 drone (maximum total take-off weight coral reefs. We discuss the utility of such data to monitor temporal changes in topographic complexity of reefs and associated biological processes.

  18. Coral Reef Remote Sensing Using Simulated VIIRS and LDCM Imagery

    Science.gov (United States)

    Estep, Leland; Spruce, Joseph P.; Blonski, Slawomir; Moore, Roxzana

    2008-01-01

    The Rapid Prototyping Capability (RPC) node at NASA Stennis Space Center, MS, was used to simulate NASA next-generation sensor imagery over well-known coral reef areas: Looe Key, FL, and Kaneohe Bay, HI. The objective was to assess the degree to which next-generation sensor systems-the Visible/Infrared Imager/Radiometer Suite (VIIRS) and the Landsat Data Continuity Mission (LDCM)- might provide key input to the National Oceanographic and Atmospheric Administration (NOAA) Integrated Coral Observing Network (ICON)/Coral Reef Early Warning System (CREWS) Decision Support Tool (DST). The DST data layers produced from the simulated imagery concerned water quality and benthic classification map layers. The water optical parameters of interest were chlorophyll (Chl) and the absorption coefficient (a). The input imagery used by the RPC for simulation included spaceborne (Hyperion) and airborne (AVIRIS) hyperspectral data. Specific field data to complement and aid in validation of the overflight data was used when available. The results of the experiment show that the next-generation sensor systems are capable of providing valuable data layer resources to NOAA s ICON/CREWS DST.

  19. Coral reef encruster communities and carbonate production in cryptic and exposed coral reef habitats along a gradient of terrestrial disturbance

    Science.gov (United States)

    Mallela, J.

    2007-12-01

    Encrusting calcareous organisms such as bryozoans, crustose coralline algae (CCA), foraminiferans, and serpulid worms are integral components of tropical framework-building reefs. They can contribute calcium carbonate to the reef framework, stabilise the substrate, and promote larval recruitment of other framework-building species (e.g. coral recruits). The percentage cover of encrusting organisms and their rates of carbonate production (g m-2 year-1) were assessed at four sites within a coastal embayment, along a gradient of riverine influence (high-low). As the orientation and type of substrate is thought to influence recruitment of encrusting organisms, organisms recruiting to both natural (the underside of platy corals) and experimental substrates were assessed. The effect of substrate exposure under different levels of riverine influence was assessed by orientating experimental substrates to mimic cryptic and exposed reef habitats (downwards-facing vs upwards-facing tiles) at each site. Cryptic experimental tiles supported similar encruster assemblages to those recruiting to the underneath (cryptic side) of platy corals, suggesting that tiles can be used as an experimental substrate to assess encruster recruitment in reef systems. Encruster cover, in particular CCA, and carbonate production was significantly higher at low-impact (clear water), high wave energy sites when compared to highly riverine impacted (turbid water), low wave energy sites. Cryptically orientated substrates supported a greater diversity of encrusting organisms, in particular serpulid worms and bryozoans. The inverse relationships observed between riverine inputs and encrusters (total encruster cover and carbonate production) have implications for both the current and future rates and styles of reefal framework production.

  20. A trait-based approach to advance coral reef science

    DEFF Research Database (Denmark)

    Madin, Joshua S.; Hoogenboom, Mia O.; Connolly, Sean R.

    2016-01-01

    Coral reefs are biologically diverse and ecologically complex ecosystems constructed by stony corals. Despite decades of research, basic coral population biology and community ecology questions remain. Quantifying trait variation among species can help resolve these questions, but progress has been...... a large amount of variation for a range of biological and ecological processes. Such an approach can accelerate our understanding of coral ecology and our ability to protect critically threatened global ecosystems....

  1. STUDY OF CORAL REEF DISTRIBUTION AROUND BADUNG STRAIT USING ALOS SATELLITE DATA

    Directory of Open Access Journals (Sweden)

    Suciati -

    2012-11-01

    Full Text Available Coral reef ecosystem has become a centre of interest because of the development of marine tourism development,coral fragment trade, and other activities that are able to destroy coral reef ecosystem. ALOS with AVNIR-2 sensor wasselected because it has 3 visible spectrums which have the ability of penetration into water column, also it have highenough of spatial resolution i.e.10 meters.The aims of this research are: 1 to identify the level of accuracy of ALOS satellite image in activity for coral reefdistribution mapping and 2 to identify the general condition of coral reefs in around Badung Strait.Preliminary processes of image processing are geometric correction and atmosphere correction. Water columneffect was reduced by Lyzenga Algorithm. Five classes were determined by multispectral classification process e.i. coral,vegetation, sand, rubble of coral and substrate. Ground check was done to identify the accuracy level. The methodaccuracy by Lillesand and Kiefer was used in this research.The result of accuracy test shows that classification accuracy was 87.16% for overall accuracy. Results of imageinterpretation show that live coral in around Badung strait is estimated to have about 141,056 hectares width. It wascovering Denpasar Regency in the east and south-east side of Serangan Island with the fringing reef type; KlungkungRegency in the west side of Lembongan Island with the fringing reef type and in the south side with the platform type,while in Gianyar Regency was not found the coral reef distribution.

  2. Palaeoecological records of coral community development on a turbid, nearshore reef complex: baselines for assessing ecological change

    Science.gov (United States)

    Johnson, J. A.; Perry, C. T.; Smithers, S. G.; Morgan, K. M.; Santodomingo, N.; Johnson, K. G.

    2017-09-01

    Understanding past coral community development and reef growth is crucial for placing contemporary ecological and environmental change within appropriate reef-building timescales. On Australia's Great Barrier Reef (GBR), coral reefs situated within coastal inner-shelf zones are a particular priority. This is due to their close proximity to river point sources, and therefore susceptibility to reduced water quality discharged from coastal catchments, many of which have been modified following European settlement (ca. 1850 AD). However, the extent of water-quality decline and its impacts on the GBR's inner-shelf reefs remain contentious. In this study, palaeoecological coral assemblage records were developed for five proximal coral reefs situated within a nearshore turbid-zone reef complex on the central GBR. A total of 29 genera of Scleractinia were identified from the palaeoecological inventory of the reef complex, with key contributions to reef-building made by Acropora, Montipora, and Turbinaria. Discrete intervals pre- and post-dating European settlement, but associated with equivalent water depths, were identified using Bayesian age-depth modelling, enabling investigation of competing ideas of the main drivers of nearshore coral assemblage change. Specifically, we tested the hypotheses that changes in the composition of nearshore coral assemblages are: (1) intrinsically driven and linked to vertical reef development towards sea level, and (2) the result of changes in water quality associated with coastal river catchment modification. Our records found no discernible evidence of change in the generic composition of coral assemblages relative to European settlement. Instead, two distinctive depth-stratified assemblages were identified. This study demonstrates the robust nature of nearshore coral communities under reported water-quality decline and provides a useful context for the monitoring and assessment of ecological change on reefs located within the most

  3. Expansion of corals on temperate reefs: direct and indirect effects of marine heatwaves

    Science.gov (United States)

    Tuckett, C. A.; de Bettignies, T.; Fromont, J.; Wernberg, T.

    2017-09-01

    Globally, many temperate marine communities have experienced significant temperature increases over recent decades in the form of gradual warming and heatwaves. As a result, these communities are shifting towards increasingly subtropical and tropical species compositions. Expanding coral populations have been reported from several temperate reef ecosystems along warming coastlines; these changes have been attributed to direct effects of gradual warming over decades. In contrast, increases in coral populations following shorter-term extreme warming events have rarely been documented. In this study, we compared coral populations on 17 temperate reefs in Western Australia before (2005/06) and after (2013) multiple marine heatwaves (2010-2012) affected the entire coastline. We hypothesised that coral communities would expand and change as a consequence of increasing local populations and recruitment of warm-affinity species. We found differences in coral community structure over time, driven primarily by a fourfold increase of one local species, Plesiastrea versipora, rather than recruitment of warm-affinity species. Coral populations became strongly dominated by small size classes, indicative of recent increased recruitment or recruit survival. These changes were likely facilitated by competitive release of corals from dominant temperate seaweeds, which perished during the heatwaves, rather than driven by direct temperature effects. Overall, as corals are inherently warm-water taxa not commonly associated with seaweed-dominated temperate reefs, these findings are consistent with a net tropicalisation. Our study draws attention to processes other than gradual warming that also influence the trajectory of temperate reefs in a changing ocean.

  4. Oman's coral reefs: A unique ecosystem challenged by natural and man-related stresses and in need of conservation.

    Science.gov (United States)

    Burt, J A; Coles, S; van Lavieren, H; Taylor, O; Looker, E; Samimi-Namin, K

    2016-04-30

    Oman contains diverse and abundant reef coral communities that extend along a coast that borders three environmentally distinct water bodies, with corals existing under unique and often stressful environmental conditions. In recent years Oman's reefs have undergone considerable change due to recurrent predatory starfish outbreaks, cyclone damage, harmful algal blooms, and other stressors. In this review we summarize current knowledge of the biology and status of corals in Oman, particularly in light of recent stressors and projected future threats, and examine current reef management practices. Oman's coral communities occur in marginal environmental conditions for reefs, and hence are quite vulnerable to anthropogenic effects. We recommend a focus on developing conservation-oriented coral research to guide proactive management and expansion of the number and size of designated protected areas in Oman, particularly those associated with critical coral habitat.

  5. Foraminifera as bioindicators in coral reef assessment and monitoring: the FORAM Index. Foraminifera in Reef Assessment and Monitoring.

    Science.gov (United States)

    Hallock, Pamela; Lidz, Barbara H; Cockey-Burkhard, Elizabeth M; Donnelly, Kelly B

    2003-01-01

    Coral reef communities are threatened worldwide. Resource managers urgently need indicators of the biological condition of reef environments that can relate data acquired through remote-sensing, water-quality and benthic-community monitoring to stress responses in reef organisms. The "FORAM" (Foraminifera in Reef Assessment and Monitoring) Index (FI) is based on 30 years of research on reef sediments and reef-dwelling larger foraminifers. These shelled protists are ideal indicator organisms because: Foraminifers are widely used as environmental and paleoenvironmental indicators in many contexts. Reef-building, zooxanthellate corals and foraminifers with algal symbionts have similar water-quality requirements. The relatively short life spans of foraminifers as compared with long-lived colonial corals facilitate differentiation between long-term water-quality decline and episodic stress events. Foraminifers are relatively small and abundant, permitting statistically significant sample sizes to be collected quickly and relatively inexpensively, ideally as a component of comprehensive monitoring programs; and, collection of foraminifers has minimal impact on reef resources. USEPA guidelines for ecological indicators are used to evaluate the Fl. Data required are foraminiferal assemblages from surface sediments of reef-associated environments. The Fl provides resource managers with a simple procedure for determining the suitability of benthic environments for communities dominated by algal symbiotic organisms. The FI can be applied independently, or incorporated into existing or planned monitoring efforts. The simple calculations require limited computer capabilities and therefore can be applied readily to reef-associated environments worldwide. In addition, the foraminiferal shells collected can be subjected to morphometric and geochemical analyses in areas of suspected heavy-metal pollution, and the data sets for the index can be used with other monitoring data in

  6. Quantifying climatological ranges and anomalies for Pacific coral reef ecosystems.

    Science.gov (United States)

    Gove, Jamison M; Williams, Gareth J; McManus, Margaret A; Heron, Scott F; Sandin, Stuart A; Vetter, Oliver J; Foley, David G

    2013-01-01

    Coral reef ecosystems are exposed to a range of environmental forcings that vary on daily to decadal time scales and across spatial scales spanning from reefs to archipelagos. Environmental variability is a major determinant of reef ecosystem structure and function, including coral reef extent and growth rates, and the abundance, diversity, and morphology of reef organisms. Proper characterization of environmental forcings on coral reef ecosystems is critical if we are to understand the dynamics and implications of abiotic-biotic interactions on reef ecosystems. This study combines high-resolution bathymetric information with remotely sensed sea surface temperature, chlorophyll-a and irradiance data, and modeled wave data to quantify environmental forcings on coral reefs. We present a methodological approach to develop spatially constrained, island- and atoll-scale metrics that quantify climatological range limits and anomalous environmental forcings across U.S. Pacific coral reef ecosystems. Our results indicate considerable spatial heterogeneity in climatological ranges and anomalies across 41 islands and atolls, with emergent spatial patterns specific to each environmental forcing. For example, wave energy was greatest at northern latitudes and generally decreased with latitude. In contrast, chlorophyll-a was greatest at reef ecosystems proximate to the equator and northern-most locations, showing little synchrony with latitude. In addition, we find that the reef ecosystems with the highest chlorophyll-a concentrations; Jarvis, Howland, Baker, Palmyra and Kingman are each uninhabited and are characterized by high hard coral cover and large numbers of predatory fishes. Finally, we find that scaling environmental data to the spatial footprint of individual islands and atolls is more likely to capture local environmental forcings, as chlorophyll-a concentrations decreased at relatively short distances (>7 km) from 85% of our study locations. These metrics will help

  7. Quantifying climatological ranges and anomalies for Pacific coral reef ecosystems.

    Directory of Open Access Journals (Sweden)

    Jamison M Gove

    Full Text Available Coral reef ecosystems are exposed to a range of environmental forcings that vary on daily to decadal time scales and across spatial scales spanning from reefs to archipelagos. Environmental variability is a major determinant of reef ecosystem structure and function, including coral reef extent and growth rates, and the abundance, diversity, and morphology of reef organisms. Proper characterization of environmental forcings on coral reef ecosystems is critical if we are to understand the dynamics and implications of abiotic-biotic interactions on reef ecosystems. This study combines high-resolution bathymetric information with remotely sensed sea surface temperature, chlorophyll-a and irradiance data, and modeled wave data to quantify environmental forcings on coral reefs. We present a methodological approach to develop spatially constrained, island- and atoll-scale metrics that quantify climatological range limits and anomalous environmental forcings across U.S. Pacific coral reef ecosystems. Our results indicate considerable spatial heterogeneity in climatological ranges and anomalies across 41 islands and atolls, with emergent spatial patterns specific to each environmental forcing. For example, wave energy was greatest at northern latitudes and generally decreased with latitude. In contrast, chlorophyll-a was greatest at reef ecosystems proximate to the equator and northern-most locations, showing little synchrony with latitude. In addition, we find that the reef ecosystems with the highest chlorophyll-a concentrations; Jarvis, Howland, Baker, Palmyra and Kingman are each uninhabited and are characterized by high hard coral cover and large numbers of predatory fishes. Finally, we find that scaling environmental data to the spatial footprint of individual islands and atolls is more likely to capture local environmental forcings, as chlorophyll-a concentrations decreased at relatively short distances (>7 km from 85% of our study locations

  8. Variability in reef connectivity in the Coral Triangle

    Science.gov (United States)

    Thompson, D. M.; Kleypas, J. A.; Castruccio, F. S.; Watson, J. R.; Curchitser, E. N.

    2015-12-01

    The Coral Triangle (CT) is not only the global center of marine biodiversity, it also supports the livelihoods of millions of people. Unfortunately, it is also considered the most threatened of all reef regions, with rising temperature and coral bleaching already taking a toll. Reproductive connectivity between reefs plays a critical role in the reef's capacity to recover after such disturbances. Thus, oceanographic modeling efforts to understand patterns of reef connectivity are essential to the effective design of a network of Marine Protected Areas (MPAs) to conserve marine ecosystems in the Coral Triangle. Here, we combine a Regional Ocean Modeling System developed for the Coral Triangle (CT-ROMS) with a Lagrangian particle tracking tool (TRACMASS) to investigate the probability of coral larval transport between reefs. A 47-year hindcast simulation (1960-2006) was used to investigate the variability in larval transport of a broadcasting coral following mass spawning events in April and September. Potential connectivity between reefs was highly variable and stochastic from year to year, emphasizing the importance of decadal or longer simulations in identifying connectivity patterns, key source and sink regions, and thus marine management targets for MPAs. The influence of temperature on realized connectivity (future work) may add further uncertainty to year-to-year patterns of connectivity between reefs. Nonetheless, the potential connectivity results we present here suggest that although reefs in this region are primarily self-seeded, rare long-distance dispersal may promote recovery and genetic exchange between reefs in the region. The spatial pattern of "subpopulations" based solely on the physical drivers of connectivity between reefs closely match regional patterns of biodiversity, suggesting that physical barriers to larval dispersal may be a key driver of reef biodiversity. Finally, 21st Century simulations driven by the Community Earth System Model (CESM

  9. Coral skeletons provide historical evidence of phosphorus runoff on the great barrier reef.

    Directory of Open Access Journals (Sweden)

    Jennie Mallela

    Full Text Available Recently, the inshore reefs of the Great Barrier Reef have declined rapidly because of deteriorating water quality. Increased catchment runoff is one potential culprit. The impacts of land-use on coral growth and reef health however are largely circumstantial due to limited long-term data on water quality and reef health. Here we use a 60 year coral core record to show that phosphorus contained in the skeletons (P/Ca of long-lived, near-shore Porites corals on the Great Barrier Reef correlates with annual records of fertiliser application and particulate phosphorus loads in the adjacent catchment. Skeletal P/Ca also correlates with Ba/Ca, a proxy for fluvial sediment loading, again linking near-shore phosphorus records with river runoff. Coral core records suggest that phosphorus levels increased 8 fold between 1949 and 2008 with the greatest levels coinciding with periods of high fertiliser-phosphorus use. Periods of high P/Ca correspond with intense agricultural activity and increased fertiliser application in the river catchment following agricultural expansion and replanting after cyclone damage. Our results demonstrate how coral P/Ca records can be used to assess terrestrial nutrient loading of vulnerable near-shore reefs.

  10. 77 FR 32572 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Coral and Coral Reefs Off the...

    Science.gov (United States)

    2012-06-01

    ..., and South Atlantic; Coral and Coral Reefs Off the Southern Atlantic States; Exempted Fishing Permit... South Carolina Aquarium to collect, with certain conditions, various species of reef fish, crabs, and...

  11. 76 FR 41764 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Coral and Coral Reefs off the...

    Science.gov (United States)

    2011-07-15

    ... Atlantic; Coral and Coral Reefs off the Southern Atlantic States; Exempted Fishing Permit AGENCY: National... artificial reefs without additional authorization. A report on the project findings is due at the end of the...

  12. Bright spots among the world’s coral reefs

    Science.gov (United States)

    Cinner, Joshua E.; Huchery, Cindy; MacNeil, M. Aaron; Graham, Nicholas A. J.; McClanahan, Tim R.; Maina, Joseph; Maire, Eva; Kittinger, John N.; Hicks, Christina C.; Mora, Camilo; Allison, Edward H.; D'Agata, Stephanie; Hoey, Andrew; Feary, David A.; Crowder, Larry; Williams, Ivor D.; Kulbicki, Michel; Vigliola, Laurent; Wantiez, Laurent; Edgar, Graham; Stuart-Smith, Rick D.; Sandin, Stuart A.; Green, Alison L.; Hardt, Marah J.; Beger, Maria; Friedlander, Alan; Campbell, Stuart J.; Holmes, Katherine E.; Wilson, Shaun K.; Brokovich, Eran; Brooks, Andrew J.; Cruz-Motta, Juan J.; Booth, David J.; Chabanet, Pascale; Gough, Charlie; Tupper, Mark; Ferse, Sebastian C. A.; Sumaila, U. Rashid; Mouillot, David

    2016-07-01

    Ongoing declines in the structure and function of the world’s coral reefs require novel approaches to sustain these ecosystems and the millions of people who depend on them. A presently unexplored approach that draws on theory and practice in human health and rural development is to systematically identify and learn from the ‘outliers’—places where ecosystems are substantially better (‘bright spots’) or worse (‘dark spots’) than expected, given the environmental conditions and socioeconomic drivers they are exposed to. Here we compile data from more than 2,500 reefs worldwide and develop a Bayesian hierarchical model to generate expectations of how standing stocks of reef fish biomass are related to 18 socioeconomic drivers and environmental conditions. We identify 15 bright spots and 35 dark spots among our global survey of coral reefs, defined as sites that have biomass levels more than two standard deviations from expectations. Importantly, bright spots are not simply comprised of remote areas with low fishing pressure; they include localities where human populations and use of ecosystem resources is high, potentially providing insights into how communities have successfully confronted strong drivers of change. Conversely, dark spots are not necessarily the sites with the lowest absolute biomass and even include some remote, uninhabited locations often considered near pristine. We surveyed local experts about social, institutional, and environmental conditions at these sites to reveal that bright spots are characterized by strong sociocultural institutions such as customary taboos and marine tenure, high levels of local engagement in management, high dependence on marine resources, and beneficial environmental conditions such as deep-water refuges. Alternatively, dark spots are characterized by intensive capture and storage technology and a recent history of environmental shocks. Our results suggest that investments in strengthening fisheries

  13. ReefSAM - Reef Sedimentary Accretion Model: A new 3D coral reef evolution model/simulator

    Science.gov (United States)

    Barrett, Samuel; Webster, Jody

    2013-04-01

    Coral reefs show characteristic morphological patterns (e.g. coral dominated margins with detrital carbonate dominated lagoons/back-reef) and temporal development (e.g. Hopley et al. 2007). While the processes which lead to predictable patterns on a range of scales have been discussed qualitatively, a full quantitative understanding of the range of processes and parameters involved requires modelling. Previous attempts to model complex Holocene reef systems (i.e. One Tree Reef, GBR - Barrett and Webster 2012) using a carbonate stratigraphic forward model (Carbonate3D - Warrlich et al. 2002) identified a number of important but unsimulated processes and potential model improvements. ReefSAM has been written from scratch in Matlab using these findings and experiences from using Carbonate3D. It simulates coralgal accretion and carbonate sand production and transport. Specific improvements include: 1. a more complex hydrodynamic model based on wave refraction and incorporating vertical (depth) and lateral (substrate dependent) variations in transport energy and erosion. 2. a complex reef growth model incorporating depth, wave energy/turbidity and substrate composition. 3. Paleo-water depth, paleo-wave energy and bio-zone (combination of paleo-water depth and wave energy) model outputs allowing coralgal habitat changes through time and space to be simulated and compared to observational data. The model is compared to the well studied One Tree Reef - tests similar to those undertaken in Barrett and Webster 2012 with Carbonate3D are presented. Model development coincides with plans for further intensive drilling at One Tree Reef (mid 2013) providing an opportunity to test the model predictively. The model is still in active development. References: Barrett, S.J., Webster, J.M.,2012. Holocene evolution of the Great Barrier Reef: Insights from 3D numerical modelling. Sedimentary Geology 265-266, 56-71. Warrlich, G.M.D., Waltham, D.A., Bosence D.W.J., 2002. Quantifying the

  14. Anthropogenic mortality on coral reefs in Caribbean Panama predates coral disease and bleaching.

    Science.gov (United States)

    Cramer, Katie L; Jackson, Jeremy B C; Angioletti, Christopher V; Leonard-Pingel, Jill; Guilderson, Thomas P

    2012-06-01

    Caribbean reef corals have declined precipitously since the 1980s due to regional episodes of bleaching, disease and algal overgrowth, but the extent of earlier degradation due to localised historical disturbances such as land clearing and overfishing remains unresolved. We analysed coral and molluscan fossil assemblages from reefs near Bocas del Toro, Panama to construct a timeline of ecological change from the 19th century-present. We report large changes before 1960 in coastal lagoons coincident with extensive deforestation, and after 1960 on offshore reefs. Striking changes include the demise of previously dominant staghorn coral Acropora cervicornis and oyster Dendrostrea frons that lives attached to gorgonians and staghorn corals. Reductions in bivalve size and simplification of gastropod trophic structure further implicate increasing environmental stress on reefs. Our paleoecological data strongly support the hypothesis, from extensive qualitative data, that Caribbean reef degradation predates coral bleaching and disease outbreaks linked to anthropogenic climate change. © 2012 Blackwell Publishing Ltd/CNRS.

  15. Microbial to reef scale interactions between the reef-building coral Montastraea annularis and benthic algae

    NARCIS (Netherlands)

    Barott, K.L.; Rodriguez-Mueller, B; Youle, M.; Marhaver, K.L.; Vermeij, M.J.A.; Smith, J.E.; Rohwer, F.L.

    2012-01-01

    Competition between reef-building corals and benthic algae is of key importance for reef dynamics. These interactions occur on many spatial scales, ranging from chemical to regional. Using microprobes, 16S rDNA pyrosequencing and underwater surveys, we examined the interactions between the reef-buil

  16. Coral Reef and Coastal Ecosystems Decision Support Workshop April 27-29, 2010 Caribbean Coral Reef Institute, La Parguera, Puerto Rico

    Science.gov (United States)

    The U.S. Environmental Protection Agency (EPA) and Caribbean Coral Reef Institute (CCRI) hosted a Coral Reef and Coastal Ecosystems Decision Support Workshop on April 27-28, 2010 at the Caribbean Coral Reef Institute in La Parguera, Puerto Rico. Forty-three participants, includin...

  17. Coral Reef and Coastal Ecosystems Decision Support Workshop April 27-29, 2010 Caribbean Coral Reef Institute, La Parguera, Puerto Rico

    Science.gov (United States)

    The U.S. Environmental Protection Agency (EPA) and Caribbean Coral Reef Institute (CCRI) hosted a Coral Reef and Coastal Ecosystems Decision Support Workshop on April 27-28, 2010 at the Caribbean Coral Reef Institute in La Parguera, Puerto Rico. Forty-three participants, includin...

  18. Ecological limitations to the resilience of coral reefs

    Science.gov (United States)

    Mora, Camilo; Graham, Nicholas A. J.; Nyström, Magnus

    2016-12-01

    The decline of coral reefs has been broadly attributed to human stressors being too strong and pervasive, whereas biological processes that may render coral reefs fragile have been sparsely considered. Here we review several ecological factors that can limit the ability of coral reefs to withstand disturbance. These include: (1) Many species lack the adaptive capacity to cope with the unprecedented disturbances they currently face; (2) human disturbances impact vulnerable life history stages, reducing reproductive output and the supply of recruits essential for recovery; (3) reefs can be vulnerable to the loss of few species, as niche specialization or temporal and spatial segregation makes each species unique (i.e., narrow ecological redundancy); in addition, many foundation species have similar sensitivity to disturbances, suggesting that entire functions can be lost to single disturbances; and (4) feedback loops and extinction vortices may stabilize degraded states or accelerate collapses even if stressors are removed. This review suggests that the degradation of coral reefs is due to not only the severity of human stressors but also the "fragility" of coral reefs. As such, appropriate governance is essential to manage stressors while being inclusive of ecological process and human uses across transnational scales. This is a considerable but necessary upgrade in current management if the integrity, and delivery of goods and services, of coral reefs is to be preserved.

  19. Small-Scale Spatial Analysis of In Situ Sea Temperature throughout a Single Coral Patch Reef

    Directory of Open Access Journals (Sweden)

    Kelvin D. Gorospe

    2011-01-01

    Full Text Available Thermal stress can cause geographically widespread bleaching events, during which corals become decoupled from their symbiotic algae. Bleaching, however, also can occur on smaller, spatially patchy scales, with corals on the same reef exhibiting varying bleaching responses. Thus, to investigate fine spatial scale sea temperature variation, temperature loggers were deployed on a 4 m grid on a patch reef in Kāne'ohe Bay, Oahu, Hawai‘i to monitor in situ, benthic temperature every 50 minutes at 85 locations for two years. Temperature variation on the reef was characterized using several summary indices related to coral thermal stress. Results show that stable, biologically significant temperature variation indeed exists at small scales and that depth, relative water flow, and substrate cover and type were not significant drivers of this variation. Instead, finer spatial and temporal scale advection processes at the benthic boundary layer are likely responsible. The implications for coral ecology and conservation are discussed.

  20. 76 FR 63904 - Proposed Information Collection; Comment Request; Coral Reef Conservation Program Administration

    Science.gov (United States)

    2011-10-14

    ..., extension 150, or Jenny.Waddell@noaagov. SUPPLEMENTARY INFORMATION: I. Abstract The Coral Reef Conservation... reef conservation to conduct activities to protect and conserve coral reef ecosystems. The information...) if a proposed project is consistent with the coral reef conservation priorities of authorities...

  1. Ecological variables, including physiognomic-structural attributes, and classification of Indonesian coral reefs

    Science.gov (United States)

    Bak, R. P. M.; Povel, G. D. E.

    Communities are distinguished by biological and physical features, such as size and shape of organisms and dead substrata, which are characteristic expressions of the organizing forces in the community. We measured 87 of such features in 39 transects on seaward-facing reef slopes in the eastern Indonesian archipelago, but did not identify coral species. We aimed to identify the basic variables that are indispensable to classify coral reef communities. This would give ecological information on variation in reef communities and show exactly which data must be recorded in the field. Principal Component Analysis (PCA) of the data matrix showed the following variables to be important in the ordination of transects along the axes: coral colony shape, loose fragments, bare bottom, coral tissue wounds, rubble, sediment/rubble, crustose coralline algae, excavating sponge, miscellaneous organisms, coral overgrowth, interaction coral/non-coral, Acanthaster, maximum size coral colonies, tabular Acropora, massive Porites, fungiids, angle slope, and crevices. We used the transect data to define four groups of environmental conditions: 'sheltered', 'exposed' (to water movement), 'biologically disturbed' and 'physically disturbed'. Discriminant Analysis was employed to classify additional transects. It appeared that a minimum of 9 variables has to be measured in the field (rubble, thick branching corals, fungiids, sediment/rubble, two largest-colonies diameters, massive Porites, angle slope, Acanthaster) to assign transects to one of those groups (P Discriminant Analysis.

  2. Coral health on reefs near mining sites in New Caledonia.

    Science.gov (United States)

    Heintz, T; Haapkylä, J; Gilbert, A

    2015-07-23

    Coral health data are poorly documented in New Caledonia, particularly from reefs chronically subject to anthropogenic and natural runoff. We investigated patterns of coral disease and non-disease conditions on reefs situated downstream of mining sites off the coast of New Caledonia. Surveys were conducted in March 2013 at 2 locations along the west coast and 2 locations along the east coast of the main island. Only 2 coral diseases were detected: growth anomalies and white syndrome. The most prevalent signs of compromised health at each location were sediment damage and algal overgrowth. These results support earlier findings that sedimentation and turbidity are major threats to in-shore reefs in New Caledonia. The Poritidae-dominated west coast locations were more subject to sediment damage, algal overgrowth and growth anomalies compared to the Acroporidae-dominated east coast locations. If growth form and resistance of coral hosts influence these results, differences in environmental conditions including hydro-dynamism between locations may also contribute to these outputs. Our results highlight the importance of combining coral health surveys with measurements of coral cover when assessing the health status of a reef, as reefs with high coral cover may have a high prevalence of corals demonstrating signs of compromised health.

  3. 77 FR 12243 - Proposed Information Collection; Comment Request; Pacific Islands Region Coral Reef Ecosystems...

    Science.gov (United States)

    2012-02-29

    ... Islands Region Coral Reef Ecosystems Permit Form AGENCY: National Oceanic and Atmospheric Administration... vessel to fish for Western Pacific coral reef ecosystem management unit species in the designated low-use... regulations; or (3) fishing for, taking, or retaining any Potentially Harvested Coral Reef Taxa in the coral...

  4. Environmental quality and preservation; reefs, corals, and carbonate sands; guides to reef-ecosystem health and environment

    Science.gov (United States)

    Lidz, Barbara H.

    2001-01-01

    reefs in South Florida, relative to type of underlying bedrock morphology, and their varied natural response to rising sea level. These studies also assess movement and accumulation of sands, relative to direction of prevailing energy, and origin of the component sand grains. Geophysical data collected with highresolution sound-wave instruments that provide pictures of the sediment and bedrock are used to interpret sediment thickness. Reef thickness is determined by collecting limestone rock cores by drilling. Drill cores through reefs are used to identify the coral species that built them and to determine how reefs reacted to rising sea level. These data are supplemented by using isotope-dating techniques to derive the carbon-14 (C14) age of the corals and mangrove peat in the cores. Mangrove peat forms in very shallow water and at the shoreline but is found today buried beneath offshore reefs.

  5. Dynamic stability of coral reefs on the west Australian coast.

    Science.gov (United States)

    Speed, Conrad W; Babcock, Russ C; Bancroft, Kevin P; Beckley, Lynnath E; Bellchambers, Lynda M; Depczynski, Martial; Field, Stuart N; Friedman, Kim J; Gilmour, James P; Hobbs, Jean-Paul A; Kobryn, Halina T; Moore, James A Y; Nutt, Christopher D; Shedrawi, George; Thomson, Damian P; Wilson, Shaun K

    2013-01-01

    Monitoring changes in coral cover and composition through space and time can provide insights to reef health and assist the focus of management and conservation efforts. We used a meta-analytical approach to assess coral cover data across latitudes 10-35°S along the west Australian coast, including 25 years of data from the Ningaloo region. Current estimates of coral cover ranged between 3 and 44% in coral habitats. Coral communities in the northern regions were dominated by corals from the families Acroporidae and Poritidae, which became less common at higher latitudes. At Ningaloo Reef coral cover has remained relatively stable through time (∼28%), although north-eastern and southern areas have experienced significant declines in overall cover. These declines are likely related to periodic disturbances such as cyclones and thermal anomalies, which were particularly noticeable around 1998/1999 and 2010/2011. Linear mixed effects models (LME) suggest latitude explains 10% of the deviance in coral cover through time at Ningaloo. Acroporidae has decreased in abundance relative to other common families at Ningaloo in the south, which might be related to persistence of more thermally and mechanically tolerant families. We identify regions where quantitative time-series data on coral cover and composition are lacking, particularly in north-western Australia. Standardising routine monitoring methods used by management and research agencies at these, and other locations, would allow a more robust assessment of coral condition and a better basis for conservation of coral reefs.

  6. Spatial dynamics of benthic competition on coral reefs.

    Science.gov (United States)

    Sandin, Stuart A; McNamara, Dylan E

    2012-04-01

    The community structure of sedentary organisms is largely controlled by the outcome of direct competition for space. Understanding factors defining competitive outcomes among neighbors is thus critical for predicting large-scale changes, such as transitions to alternate states within coral reefs. Using a spatially explicit model, we explored the importance of variation in two spatial properties in benthic dynamics on coral reefs: (1) patterns of herbivory are spatially distinct between fishes and sea urchins and (2) there is wide variation in the areal extent into which different coral species can expand. We reveal that the size-specific, competitive asymmetry of corals versus fleshy algae highlights the significance of spatial patterning of herbivory and of coral growth. Spatial dynamics that alter the demographic importance of coral recruitment and maturation have profound effects on the emergent structure of the reef benthic community. Spatially constrained herbivory (as by sea urchins) is more effective than spatially unconstrained herbivory (as by many fish) at opening space for the time needed for corals to settle and to recruit to the adult population. Further, spatially unconstrained coral growth (as by many branching coral species) reduces the number of recruitment events needed to fill a habitat with coral relative to more spatially constrained growth (as by many massive species). Our model predicts that widespread mortality of branching corals (e.g., Acropora spp) and herbivorous sea urchins (particularly Diadema antillarum) in the Caribbean has greatly reduced the potential for restoration across the region.

  7. ReefLink Database: A decision support tool for Linking Coral Reefs and Society Through Systems Thinking

    Science.gov (United States)

    Coral reefs provide the ecological foundation for productive and diverse fish and invertebrate communities that support multibillion dollar reef fishing and tourism industries. Yet reefs are threatened by growing coastal development, climate change, and over-exploitation. A key i...

  8. 76 FR 82413 - Amendments to the Reef Fish, Spiny Lobster, Queen Conch and Coral and Reef Associated Plants and...

    Science.gov (United States)

    2011-12-30

    ... Part 622 Amendments to the Reef Fish, Spiny Lobster, Queen Conch and Coral and Reef Associated Plants... Amendments to the Reef Fish, Spiny Lobster, Queen Conch and Coral and Reef Associated Plants and... the FMP for the Spiny Lobster Fishery of Puerto Rico and the U.S. Virgin Islands (Spiny Lobster...

  9. 76 FR 59377 - Amendments to the Reef Fish, Spiny Lobster, Queen Conch and Coral and Reef Associated Plants and...

    Science.gov (United States)

    2011-09-26

    ..., Spiny Lobster, Queen Conch and Coral and Reef Associated Plants and Invertebrates Fishery Management... Fishery Management Plans (FMPs) for Reef Fish Resources, Spiny Lobster, Queen Conch, and Coral and Reef... (AMs) if ACLs should be exceeded for selected reef fish, spiny lobster, and aquarium trade...

  10. Coral settlement on a highly disturbed equatorial reef system.

    Science.gov (United States)

    Bauman, Andrew G; Guest, James R; Dunshea, Glenn; Low, Jeffery; Todd, Peter A; Steinberg, Peter D

    2015-01-01

    Processes occurring early in the life stages of corals can greatly influence the demography of coral populations, and successful settlement of coral larvae that leads to recruitment is a critical life history stage for coral reef ecosystems. Although corals in Singapore persist in one the world's most anthropogenically impacted reef systems, our understanding of the role of coral settlement in the persistence of coral communities in Singapore remains limited. Spatial and temporal patterns of coral settlement were examined at 7 sites in the southern islands of Singapore, using settlement tiles deployed and collected every 3 months from 2011 to 2013. Settlement occurred year round, but varied significantly across time and space. Annual coral settlement was low (~54.72 spat m(-2) yr(-1)) relative to other equatorial regions, but there was evidence of temporal variation in settlement rates. Peak settlement occurred between March-May and September-November, coinciding with annual coral spawning periods (March-April and October), while the lowest settlement occurred from December-February during the northeast monsoon. A period of high settlement was also observed between June and August in the first year (2011/12), possibly due to some species spawning outside predicted spawning periods, larvae settling from other locations or extended larval settlement competency periods. Settlement rates varied significantly among sites, but spatial variation was relatively consistent between years, suggesting the strong effects of local coral assemblages or environmental conditions. Pocilloporidae were the most abundant coral spat (83.6%), while Poritidae comprised only 6% of the spat, and Acroporidae coral spat. These results indicate that current settlement patterns are reinforcing the local adult assemblage structure ('others'; i.e. sediment-tolerant coral taxa) in Singapore, but that the replenishment capacity of Singapore's reefs appears relatively constrained, which could lead

  11. Coral settlement on a highly disturbed equatorial reef system.

    Directory of Open Access Journals (Sweden)

    Andrew G Bauman

    Full Text Available Processes occurring early in the life stages of corals can greatly influence the demography of coral populations, and successful settlement of coral larvae that leads to recruitment is a critical life history stage for coral reef ecosystems. Although corals in Singapore persist in one the world's most anthropogenically impacted reef systems, our understanding of the role of coral settlement in the persistence of coral communities in Singapore remains limited. Spatial and temporal patterns of coral settlement were examined at 7 sites in the southern islands of Singapore, using settlement tiles deployed and collected every 3 months from 2011 to 2013. Settlement occurred year round, but varied significantly across time and space. Annual coral settlement was low (~54.72 spat m(-2 yr(-1 relative to other equatorial regions, but there was evidence of temporal variation in settlement rates. Peak settlement occurred between March-May and September-November, coinciding with annual coral spawning periods (March-April and October, while the lowest settlement occurred from December-February during the northeast monsoon. A period of high settlement was also observed between June and August in the first year (2011/12, possibly due to some species spawning outside predicted spawning periods, larvae settling from other locations or extended larval settlement competency periods. Settlement rates varied significantly among sites, but spatial variation was relatively consistent between years, suggesting the strong effects of local coral assemblages or environmental conditions. Pocilloporidae were the most abundant coral spat (83.6%, while Poritidae comprised only 6% of the spat, and Acroporidae <1%. Other, unidentifiable families represented 10% of the coral spat. These results indicate that current settlement patterns are reinforcing the local adult assemblage structure ('others'; i.e. sediment-tolerant coral taxa in Singapore, but that the replenishment capacity

  12. Excess labile carbon promotes the expression of virulence factors in coral reef bacterioplankton.

    Science.gov (United States)

    Cárdenas, Anny; Neave, Matthew J; Haroon, Mohamed Fauzi; Pogoreutz, Claudia; Rädecker, Nils; Wild, Christian; Gärdes, Astrid; Voolstra, Christian R

    2017-09-12

    Coastal pollution and algal cover are increasing on many coral reefs, resulting in higher dissolved organic carbon (DOC) concentrations. High DOC concentrations strongly affect microbial activity in reef waters and select for copiotrophic, often potentially virulent microbial populations. High DOC concentrations on coral reefs are also hypothesized to be a determinant for switching microbial lifestyles from commensal to pathogenic, thereby contributing to coral reef degradation, but evidence is missing. In this study, we conducted ex situ incubations to assess gene expression of planktonic microbial populations under elevated concentrations of naturally abundant monosaccharides (glucose, galactose, mannose, and xylose) in algal exudates and sewage inflows. We assembled 27 near-complete (>70%) microbial genomes through metagenomic sequencing and determined associated expression patterns through metatranscriptomic sequencing. Differential gene expression analysis revealed a shift in the central carbohydrate metabolism and the induction of metalloproteases, siderophores, and toxins in Alteromonas, Erythrobacter, Oceanicola, and Alcanivorax populations. Sugar-specific induction of virulence factors suggests a mechanistic link for the switch from a commensal to a pathogenic lifestyle, particularly relevant during increased algal cover and human-derived pollution on coral reefs. Although an explicit test remains to be performed, our data support the hypothesis that increased availability of specific sugars changes net microbial community activity in ways that increase the emergence and abundance of opportunistic pathogens, potentially contributing to coral reef degradation.The ISME Journal advance online publication, 12 September 2017; doi:10.1038/ismej.2017.142.

  13. Excess labile carbon promotes the expression of virulence factors in coral reef bacterioplankton

    KAUST Repository

    Cardenas, Anny

    2017-09-12

    Coastal pollution and algal cover are increasing on many coral reefs, resulting in higher dissolved organic carbon (DOC) concentrations. High DOC concentrations strongly affect microbial activity in reef waters and select for copiotrophic, often potentially virulent microbial populations. High DOC concentrations on coral reefs are also hypothesized to be a determinant for switching microbial lifestyles from commensal to pathogenic, thereby contributing to coral reef degradation, but evidence is missing. In this study, we conducted ex situ incubations to assess gene expression of planktonic microbial populations under elevated concentrations of naturally abundant monosaccharides (glucose, galactose, mannose, and xylose) in algal exudates and sewage inflows. We assembled 27 near-complete (>70%) microbial genomes through metagenomic sequencing and determined associated expression patterns through metatranscriptomic sequencing. Differential gene expression analysis revealed a shift in the central carbohydrate metabolism and the induction of metalloproteases, siderophores, and toxins in Alteromonas, Erythrobacter, Oceanicola, and Alcanivorax populations. Sugar-specific induction of virulence factors suggests a mechanistic link for the switch from a commensal to a pathogenic lifestyle, particularly relevant during increased algal cover and human-derived pollution on coral reefs. Although an explicit test remains to be performed, our data support the hypothesis that increased availability of specific sugars changes net microbial community activity in ways that increase the emergence and abundance of opportunistic pathogens, potentially contributing to coral reef degradation.

  14. Acoustical Measurement and Biot Model for Coral Reef Detection and Quantification

    OpenAIRE

    Manik, Henry M.

    2016-01-01

    Coral reefs are coastal resources and very useful for marine ecosystems. Nowadays, the existence of coral reefs is seriously threatened due to the activities of blast fishing, coral mining, marine sedimentation, pollution, and global climate change. To determine the existence of coral reefs, it is necessary to study them comprehensively. One method to study a coral reef by using a propagation of sound waves is proposed. In this research, the measurement of reflection coefficient, transmission...

  15. Decline of coral reefs during late Paleocene to early Eocene global warming

    Directory of Open Access Journals (Sweden)

    C. Scheibner

    2007-10-01

    Full Text Available Since the 1980s the frequency of warming events has intensified and simultaneously widespread coral bleaching, and enhanced coral mortality have been observed. Yet, it remains unpredictable how tropical coral reef communities will react to prolonged adverse conditions. Possibly, coral reef systems are sufficiently robust to withstand continued environmental pressures. But if coral mortality increases, what will platform communities of the future look like? The co-evolution of early Paleogene carbonate platforms and palaeoclimate may provide insight. Here we document the impact of early Paleogene global warming on shallow-water carbonate platforms in the Tethys. Between 59 and 55 Ma, three discrete stages in platform development can be identified Tethys-wide: during the first stage carbonate platforms mainly consisted of coralgal reefs; during the second – transitional – stage coralgal reefs thrived only at middle latitudes and gave way to larger foraminifera as dominant carbonate producer in low latitudes; finally, during the third stage, newly developing larger foraminifera lineages completely took over the role as main carbonate-producing organisms in low to middle latitudes. We postulate that rising temperatures led to a stepwise demise of Paleocene coral reefs, giving way to an unprecedented expansion of larger foraminifera, dominating Tethyan platforms during the early Eocene.

  16. Novel tradable instruments in the conservation of coral reefs, based on the coral gardening concept for reef restoration.

    Science.gov (United States)

    Rinkevich, Baruch

    2015-10-01

    Nearly all coral reefs bordering nations have experienced net losses in reef biodiversity, goods and services, even without considering the ever-developing global change impacts. In response, this overview wishes to reveal through prospects of active reef-restoration, the currently non-marketed or poorly marketed reef services, focusing on a single coral species (Stylophora pistillata). It is implied that the integration of equity capitals and other commodification with reef-restoration practices will improve total reef services. Two tiers of market-related activities are defined, the traditional first-tier instruments (valuating costs/gains for extracting tradable goods and services) and novel second-tier instruments (new/expanded monetary tools developed as by-products of reef restoration measures). The emerging new suite of economic mechanisms based on restoration methodologies could be served as an incentive for ecosystem conservation, enhancing the sum values of all services generated by coral reefs, where the same stocks of farmed/transplanted coral colonies will be used as market instruments. I found that active restoration measures disclose 12 classes of second-tier goods and services, which may partly/wholly finance restoration acts, bringing to light reef capitalizations that allow the expansion of markets with products that have not been considered before. The degree to which the second tier of market-related services could buffer coral-reef degradation is still unclear and would vary with different reef types and in various reef restoration scenarios; however, reducing the uncertainty associated with restoration. It is expected that the expansion of markets with the new products and the enhancement of those already existing will be materialized even if reef ecosystems will recover into different statuses.

  17. First frozen repository for the Great Barrier Reef coral created.

    Science.gov (United States)

    Hagedorn, Mary; van Oppen, Madeleine J H; Carter, Virginia; Henley, Mike; Abrego, David; Puill-Stephan, Eneour; Negri, Andrew; Heyward, Andrew; MacFarlane, Doug; Spindler, Rebecca

    2012-10-01

    To build new tools for the continued protection and propagation of coral from the Great Barrier Reef (GBR), an international group of coral and cryopreservation scientists known as the Reef Recovery Initiative joined forces during the November 2011 mass-spawning event. The outcome was the creation of the first frozen bank for Australian coral from two important GBR reef-building species, Acropora tenuis and Acropora millepora. Approximately 190 frozen samples each with billions of cells were placed into long-term storage. Sperm cells were successfully cryopreserved, and after thawing, samples were used to fertilize eggs, resulting in functioning larvae. Additionally, developing larvae were dissociated, and these pluripotent cells were cryopreserved and viable after thawing. Now, we are in a unique position to move our work from the laboratory to the reefs to develop collaborative, practical conservation management tools to help secure Australia's coral biodiversity.

  18. A Survey of Coral Reefs in South China Sea Completed

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    @@ An investigation of coral reefs in South China Sea has recently completed by CAS scientists at South China Sea Institute of Oceanography (SCSIO) in Guangzhou. The compilation and analysis of the obtained data is now under way.

  19. Drivers of coral reef marine protected area performance

    National Research Council Canada - National Science Library

    Venetia Alexa Hargreaves-Allen; Susana Mourato; Eleanor Jane Milner-Gulland

    2017-01-01

    .... conservation or welfare related outcomes). We compiled a global dataset from expert knowledge for 76 coral reef MPAs in 33 countries and identified a set of performance measures reflecting ecological and socio-economic outcomes, achievement...

  20. NOAA's National Coral Reef Monitoring Program (NCRMP) Data Collection

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Coral reefs provide nearly $30 billion in net benefits in goods and services to world economies each year, including tourism, fisheries, and coastal protection, and...

  1. Coral Reef Watch, Degree Heating Weeks, 50 km

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA Coral Reef Watch distributes Degree Heating Week products using a combination of the POES AVHRR Global Area Coverage data, and data from a climatological...

  2. Status of the Coral Reefs of the Samoan Archipelago

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The objectives of this study are twofold: (1) To determine the current status of coral reef fishes and their habitat throughout the Samoan Archipelago. This will be...

  3. Biomass and Abundance of Herbivorous Fishes on Coral Reefs off ...

    African Journals Online (AJOL)

    Keywords: Herbivorous fish, biomass, coral cover, algal turf, fishing, Marine. Protected ... effects of fishing intensity, reef geomorphology and benthic cover. Distance from the ... 2003), pollution ..... derived from distance from human community.

  4. Coral Reef Color: Remote and In-Situ Imaging Spectroscopy of Reef Structure and Function

    Science.gov (United States)

    Hochberg, E. J.

    2015-12-01

    Coral reefs are threatened at local to global scales by a litany of anthropogenic impacts, including overfishing, coastal development, marine and watershed pollution, rising ocean temperatures, and ocean acidification. However, available data for the primary indicator of coral reef condition — proportional cover of living coral — are surprisingly sparse and show patterns that contradict the prevailing understanding of how environment impacts reef condition. Remote sensing is the only available tool for acquiring synoptic, uniform data on reef condition at regional to global scales. Discrimination between coral and other reef benthos relies on narrow wavebands afforded by imaging spectroscopy. The same spectral information allows non-invasive quantification of photosynthetic pigment composition, which shows unexpected phenological trends. There is also potential to link biodiversity with optical diversity, though there has been no effort in that direction. Imaging spectroscopy underlies the light-use efficiency model for reef primary production by quantifying light capture, which in turn indicates biochemical capacity for CO2 assimilation. Reef calcification is strongly correlated with primary production, suggesting the possibility for an optics-based model of that aspect of reef function, as well. By scaling these spectral models for use with remote sensing, we can vastly improve our understanding of reef structure, function, and overall condition across regional to global scales. By analyzing those remote sensing products against ancillary environmental data, we can construct secondary models to predict reef futures in the era of global change. This final point is the objective of CORAL (COral Reef Airborne Laboratory), a three-year project funded under NASA's Earth Venture Suborbital-2 program to investigate the relationship between coral reef condition at the ecosystem scale and various nominal biogeophysical forcing parameters.

  5. Reef ecology. Chemically mediated behavior of recruiting corals and fishes: a tipping point that may limit reef recovery.

    Science.gov (United States)

    Dixson, Danielle L; Abrego, David; Hay, Mark E

    2014-08-22

    Coral reefs are in global decline, converting from dominance by coral to dominance by seaweed. Once seaweeds become abundant, coral recovery is suppressed unless herbivores return to remove seaweeds, and corals then recruit. Variance in the recovery of fishes and corals is not well understood. We show that juveniles of both corals and fishes are repelled by chemical cues from fished, seaweed-dominated reefs but attracted to cues from coral-dominated areas where fishing is prohibited. Chemical cues of specific seaweeds from degraded reefs repulsed recruits, and cues from specific corals that are typical of healthy reefs attracted recruits. Juveniles were present at but behaviorally avoided recruiting to degraded reefs dominated by seaweeds. For recovery, degraded reefs may need to be managed to produce cues that attract, rather than repel, recruiting corals and fishes.

  6. Coral reef fish assemblages at Clipperton Atoll (Eastern Tropical Pacific and their relationship with coral cover

    Directory of Open Access Journals (Sweden)

    Aurora M. Ricart

    2016-11-01

    Full Text Available Clipperton Atoll, one of the most isolated coral reefs worldwide, is of great scientific interest due to its geomorphology and high levels of endemism. This study explored the reef fish assemblage structure of Clipperton Atoll and its relationship with live coral cover. Nine stations were sampled at three sites and three depths (6, 12 and 20 m around the reef, measuring fish species richness and biomass and hermatypic coral cover (at genus level. We evaluated variation in species richness, biomass and diversity of fish assemblages among sites and depths, as well as the relationship between the entire fish assemblage composition and live coral cover. The results showed that species richness and biomass were similar among sites, but differed across depths, increasing with depth. In contrast, diversity differed among sites but not among depths. Multivariate analyses indicated that fish assemblage composition differed among sites and depths in relation to changes in cover of coral of the genera Pocillopora, Porites, Pavona and Leptoseris, which dominate at different depths. The results showed that fish species richness and diversity were low at Clipperton Atoll and that, in isolated coral reefs with a low habitat heterogeneity and low human disturbance, live coral cover has a significant influence on the spatial variation of the reef fish assemblages. This study highlights the importance of coral habitat structure in shaping coral reef fish assemblages.

  7. Reef-Scale Thermal Stress Monitoring of Coral Ecosystems: New 5-km Global Products from NOAA Coral Reef Watch

    Directory of Open Access Journals (Sweden)

    Gang Liu

    2014-11-01

    Full Text Available The U.S. National Oceanic and Atmospheric Administration (NOAA Coral Reef Watch (CRW program has developed a daily global 5-km product suite based on satellite observations to monitor thermal stress on coral reefs. These products fulfill requests from coral reef managers and researchers for higher resolution products by taking advantage of new satellites, sensors and algorithms. Improvements of the 5-km products over CRW’s heritage global 50-km products are derived from: (1 the higher resolution and greater data density of NOAA’s next-generation operational daily global 5-km geo-polar blended sea surface temperature (SST analysis; and (2 implementation of a new SST climatology derived from the Pathfinder SST climate data record. The new products increase near-shore coverage and now allow direct monitoring of 95% of coral reefs and significantly reduce data gaps caused by cloud cover. The 5-km product suite includes SST Anomaly, Coral Bleaching HotSpots, Degree Heating Weeks and Bleaching Alert Area, matching existing CRW products. When compared with the 50-km products and in situ bleaching observations for 2013–2014, the 5-km products identified known thermal stress events and matched bleaching observations. These near reef-scale products significantly advance the ability of coral reef researchers and managers to monitor coral thermal stress in near-real-time.

  8. Coral reef baselines: how much macroalgae is natural?

    Science.gov (United States)

    Bruno, John F; Precht, William F; Vroom, Peter S; Aronson, Richard B

    2014-03-15

    Identifying the baseline or natural state of an ecosystem is a critical step in effective conservation and restoration. Like most marine ecosystems, coral reefs are being degraded by human activities: corals and fish have declined in abundance and seaweeds, or macroalgae, have become more prevalent. The challenge for resource managers is to reverse these trends, but by how much? Based on surveys of Caribbean reefs in the 1970s, some reef scientists believe that the average cover of seaweed was very low in the natural state: perhaps less than 3%. On the other hand, evidence from remote Pacific reefs, ecological theory, and impacts of over-harvesting in other systems all suggest that, historically, macroalgal biomass may have been higher than assumed. Uncertainties about the natural state of coral reefs illustrate the difficulty of determining the baseline condition of even well studied systems.

  9. Mapping Coral Reef Benthos, Substrates, and Bathymetry, Using Compact Airborne Spectrographic Imager (CASI Data

    Directory of Open Access Journals (Sweden)

    Ian A. Leiper

    2014-07-01

    Full Text Available This study used a reef-up approach to map coral reef benthos, substrates and bathymetry, with high spatial resolution hyperspectral image data. It investigated a physics-based inversion method for mapping coral reef benthos and substrates using readily available software: Hydrolight and ENVI. Compact Airborne Spectrographic Imager (CASI data were acquired over Heron Reef in July 2002. The spectral reflectance of coral reef benthos and substrate types were measured in-situ, and using the HydroLight 4.2 radiative transfer model a spectral reflectance library of subsurface reflectance was simulated using water column depths from 0.5–10.0 m at 0.5 m intervals. Using the Spectral Angle Mapper algorithm, sediment, benthic micro-algae, algal turf, crustose coralline algae, macro-algae, and live coral were mapped with an overall accuracy of 65% to a depth of around 8.0 m; in waters deeper than 8.0 m the match between the classified image and field validation data was poor. Qualitative validation of the maps showed accurate mapping of areas dominated by sediment, benthic micro-algae, algal turf, live coral, and macro-algae. A bathymetric map was produced for water column depths 0.5–10.0 m, at 0.5 m intervals, and showed high correspondence with in-situ sonar data (R2 value of 0.93.

  10. Coral Reef Functioning Along a Cross‐shelf Environmental Gradient: Abiotic and Biotic Drivers of Coral Reef Growth in the Red Sea

    KAUST Repository

    Roik, Anna

    2016-06-01

    Despite high temperature and salinity conditions that challenge reef growth in other oceans, the Red Sea maintains amongst the most biodiverse and productive coral reefs worldwide. It is therefore an important region for the exploration of coral reef functioning, and expected to contribute valuable insights towards the understanding of coral reefs in challenging environments. This dissertation assessed the baseline variability of in situ abiotic conditions (temperature, dissolved oxygen, pH, and total alkalinity, among others) in the central Red Sea and highlights these environmental regimes in a global context. Further, focus was directed on biotic factors (biofilm community dynamics, calcification and bioerosion), which underlie reef growth processes and are crucial for maintaining coral reef functioning and ecosystem services. Using full‐year data from an environmental cross‐shelf gradient, the dynamic interplay of abiotic and biotic factors was investigated. In situ observations demonstrate that central Red Sea coral reefs were highly variable on spatial, seasonal, and diel scales, and exhibited comparably high temperature, high salinity, and low dissolved oxygen levels, which on the one hand reflect future ocean predictions. Under these conditions epilithic bacterial and algal assemblages were mainly driven by variables (i.e., temperature, salinity, dissolved oxygen) which are predicted to change strongly in the progression of global climate change, implying an influential bottom up effect on reef‐building communities. On the other hand, measured alkalinity and other carbonate chemistry value were close to the estimates of preindustrial global ocean surface water and thus in favor of reef growth processes. Despite this beneficial carbonate chemistry, calcification and carbonate budgets in the reefs were not higher than in other coral reef regions. In this regard, seasonal calcification patterns suggest that summer temperatures may be exceeding the optima

  11. Improved water quality can ameliorate effects of climate change on corals.

    Science.gov (United States)

    Wooldridge, Scott A; Done, Terence J

    2009-09-01

    The threats of wide-scale coral bleaching and reef demise associated with anthropogenic climate change are widely known. Moreover, rates of genetic adaptation and/or changes in the coral-zooxanthella partnerships are considered unlikely to be sufficiently fast for corals to acquire increased physiological resistance to increasing sea temperatures and declining pH. However, it has been suggested that coral reef resilience to climate change may be improved by good local management of coral reefs, including management of water quality. Here, using major data sets from the Great Barrier Reef (GBR), Australia, we investigate geographic patterns of coral bleaching in 1998 and 2002 and outline a synergism between heat stress and nutrient flux as a major causative mechanism for those patterns. The study provides the first concrete evidence for the oft-expressed belief that improved coral reef management will increase the regional-scale survival prospects of coral reefs to global climate change.

  12. Can we measure beauty? Computational evaluation of coral reef aesthetics

    Directory of Open Access Journals (Sweden)

    Andreas F. Haas

    2015-11-01

    Full Text Available The natural beauty of coral reefs attracts millions of tourists worldwide resulting in substantial revenues for the adjoining economies. Although their visual appearance is a pivotal factor attracting humans to coral reefs current monitoring protocols exclusively target biogeochemical parameters, neglecting changes in their aesthetic appearance. Here we introduce a standardized computational approach to assess coral reef environments based on 109 visual features designed to evaluate the aesthetic appearance of art. The main feature groups include color intensity and diversity of the image, relative size, color, and distribution of discernable objects within the image, and texture. Specific coral reef aesthetic values combining all 109 features were calibrated against an established biogeochemical assessment (NCEAS using machine learning algorithms. These values were generated for ∼2,100 random photographic images collected from 9 coral reef locations exposed to varying levels of anthropogenic influence across 2 ocean systems. Aesthetic values proved accurate predictors of the NCEAS scores (root mean square error < 5 for N ≥ 3 and significantly correlated to microbial abundance at each site. This shows that mathematical approaches designed to assess the aesthetic appearance of photographic images can be used as an inexpensive monitoring tool for coral reef ecosystems. It further suggests that human perception of aesthetics is not purely subjective but influenced by inherent reactions towards measurable visual cues. By quantifying aesthetic features of coral reef systems this method provides a cost efficient monitoring tool that targets one of the most important socioeconomic values of coral reefs directly tied to revenue for its local population.

  13. The Economic Impact of Ocean Acidification on Coral Reefs

    OpenAIRE

    Brander, Luke M.; Rehdanz, Katrin; Tol, Richard S. J.; van Beukering, Pieter J.H.

    2009-01-01

    Because ocean acidification has only recently been recognized as a problem caused by CO2 emissions, impact studies are still rare and estimates of the economic impact are absent. This paper estimates the economic impact of ocean acidification on coral reefs which are generally considered to be economically as well as ecologically important ecosystems. First, we conduct an impact assessment in which atmospheric concentration of CO2 is linked to ocean acidity causing coral reef area loss. Next,...

  14. Ophiuroidea (Echinodermata) from coral reefs in the Mexican Pacific

    OpenAIRE

    Rebeca Granja Fernández; María Dinorah Herrero Pérezrul; Ramón Andrés López Pérez; Luis Hernández; Fabián Rodríguez Zaragoza; Robert Wallace Jones; Rubén Pineda López

    2014-01-01

    Abstract There are numerous and important coral reefs in the Mexican Pacific, but scarce studies of brittle stars conducted in these ecosystems. In this regard, this work provides the first annotated checklist of brittle stars associated with coral communities and reefs in the Mexican Pacific and an illustrated key to identify the species. We also provide taxonomic descriptions, spatial and bathymetric distributions and some important remarks of the species. We report a total of 14 species of...

  15. Tracing carbon flow through coral reef food webs using a compound-specific stable isotope approach.

    Science.gov (United States)

    McMahon, Kelton W; Thorrold, Simon R; Houghton, Leah A; Berumen, Michael L

    2016-03-01

    Coral reefs support spectacularly productive and diverse communities in tropical and sub-tropical waters throughout the world's oceans. Debate continues, however, on the degree to which reef biomass is supported by new water column production, benthic primary production, and recycled detrital carbon (C). We coupled compound-specific stable C isotope ratio (δ(13)C) analyses with Bayesian mixing models to quantify C flow from primary producers to coral reef fishes across multiple feeding guilds and trophic positions in the Red Sea. Analyses of reef fishes with putative diets composed primarily of zooplankton (Amblyglyphidodon indicus), benthic macroalgae (Stegastes nigricans), reef-associated detritus (Ctenochaetus striatus), and coral tissue (Chaetodon trifascialis) confirmed that δ(13)C values of essential amino acids from all baseline C sources were both isotopically diagnostic and accurately recorded in consumer tissues. While all four source end-members contributed to the production of coral reef fishes in our study, a single-source end-member often dominated dietary C assimilation of a given species, even for highly mobile, generalist top predators. Microbially reworked detritus was an important secondary C source for most species. Seascape configuration played an important role in structuring resource utilization patterns. For instance, Lutjanus ehrenbergii showed a significant shift from a benthic macroalgal food web on shelf reefs (71 ± 13 % of dietary C) to a phytoplankton-based food web (72 ± 11 %) on oceanic reefs. Our work provides insights into the roles that diverse C sources play in the structure and function of coral reef ecosystems and illustrates a powerful fingerprinting method to develop and test nutritional frameworks for understanding resource utilization.

  16. Tracing carbon flow through coral reef food webs using a compound-specific stable isotope approach

    KAUST Repository

    McMahon, Kelton

    2015-11-21

    Coral reefs support spectacularly productive and diverse communities in tropical and sub-tropical waters throughout the world’s oceans. Debate continues, however, on the degree to which reef biomass is supported by new water column production, benthic primary production, and recycled detrital carbon (C). We coupled compound-specific stable C isotope ratio (δ13C) analyses with Bayesian mixing models to quantify C flow from primary producers to coral reef fishes across multiple feeding guilds and trophic positions in the Red Sea. Analyses of reef fishes with putative diets composed primarily of zooplankton (Amblyglyphidodon indicus), benthic macroalgae (Stegastes nigricans), reef-associated detritus (Ctenochaetus striatus), and coral tissue (Chaetodon trifascialis) confirmed that δ13C values of essential amino acids from all baseline C sources were both isotopically diagnostic and accurately recorded in consumer tissues. While all four source end-members contributed to the production of coral reef fishes in our study, a single-source end-member often dominated dietary C assimilation of a given species, even for highly mobile, generalist top predators. Microbially reworked detritus was an important secondary C source for most species. Seascape configuration played an important role in structuring resource utilization patterns. For instance, Lutjanus ehrenbergii showed a significant shift from a benthic macroalgal food web on shelf reefs (71 ± 13 % of dietary C) to a phytoplankton-based food web (72 ± 11 %) on oceanic reefs. Our work provides insights into the roles that diverse C sources play in the structure and function of coral reef ecosystems and illustrates a powerful fingerprinting method to develop and test nutritional frameworks for understanding resource utilization.

  17. Mesoscale variation in the photophysiology of the reef building coral Pocillopora damicornis along an environmental gradient

    Science.gov (United States)

    Cooper, Timothy F.; Ulstrup, Karin E.

    2009-06-01

    Spatial variation in the photophysiology of symbiotic dinoflagellates (zooxanthellae) of the scleractinian coral Pocillopora damicornis was examined along an environmental gradient in the Whitsunday Islands (Great Barrier Reef) at two depths (3 m and 6 m). Chlorophyll a fluorescence of photosystem II (PSII) and PAR-absorptivity measurements were conducted using an Imaging-PAM (pulse-amplitude-modulation) fluorometer. Most photophysiological parameters correlated with changes in environmental conditions quantified by differences in water quality along the gradient. For example, maximum quantum yield ( Fv/ Fm) increased and PAR-absorptivity decreased as water quality improved along the gradient from nearshore reefs (low irradiance, elevated nutrients and sediments) to outer islands (high irradiance, low nutrients and sediments). For apparent photosynthetic rate (PS max) and minimum saturating irradiance ( Ek), the direction of change differed depending on sampling depth, suggesting that different mechanisms of photo-acclimatisation operated between shallow and deep corals. Deep corals conformed to typical patterns of light/shade acclimatisation whereas shallow corals exhibited reduced PS max and Ek with improving water quality coinciding with greater heat dissipation (NPQ 241). Furthermore, deep corals on nearshore reefs exhibited elevated Q241 in comparison to outer islands possibly due to effects of sedimentation and/or pollutants rather than irradiance. These results highlight the importance of mesoscale sampling to obtain useful estimates of the variability of photophysiological parameters, particularly if such measures are to be used as bioindicators of the condition of coral reefs.

  18. A model of the effects of land-based, human activities on the health of coral reefs in the Great Barrier Reef and in Fouha Bay, Guam, Micronesia

    Science.gov (United States)

    Wolanski, Eric; Richmond, Robert H.; McCook, Laurence

    2004-05-01

    A model is proposed to explain coral and algal abundance on coastal coral reefs as a function of spike-like natural disturbances from tropical cyclones and turbid river floods, followed by long recovery periods where the rate of reef recovery depends on ambient water and substratum quality. The model includes competition for space between corals and algae, coral recruitment and reef connectivity. The model is applied to a 400-km stretch of Australia's Great Barrier Reef and to the 200-m-long reef tract at Fouha Bay, in Guam, Micronesia. For these two sites and at these two scales, the model appears successful at reproducing the observed distribution of algae and coral. For both sites, it is suggested that the reefs have been degraded by human activities on land and that they will recover provided remedial measures are implemented on land to restore the water and substrate conditions. We suggest ways to improve the model and to use the model to guide future ecological research and management efforts on coastal coral reefs.

  19. The effects of trophic interactions and spatial competition on algal community composition on Hawaiian coral reefs

    NARCIS (Netherlands)

    Vermeij, M.J.A.; Dailer, M.L.; Walsh, S.M.; Donovan, M.K.; Smith, C.M.

    2010-01-01

    Much of coral reef ecology has focused on how human impacts change coral reefs to macroalgal reefs. However, macroalgae may not always be a good indicator of reef decline, especially on reefs with significant sea urchin populations, as found in Kenya and Hawaii. This study tests the effects of troph

  20. The effects of trophic interactions and spatial competition on algal community composition on Hawaiian coral reefs

    NARCIS (Netherlands)

    Vermeij, M.J.A.; Dailer, M.L.; Walsh, S.M.; Donovan, M.K.; Smith, C.M.

    2010-01-01

    Much of coral reef ecology has focused on how human impacts change coral reefs to macroalgal reefs. However, macroalgae may not always be a good indicator of reef decline, especially on reefs with significant sea urchin populations, as found in Kenya and Hawaii. This study tests the effects of

  1. Effects of cold stress and heat stress on coral fluorescence in reef-building corals.

    Science.gov (United States)

    Roth, Melissa S; Deheyn, Dimitri D

    2013-01-01

    Widespread temperature stress has caused catastrophic coral bleaching events that have been devastating for coral reefs. Here, we evaluate whether coral fluorescence could be utilized as a noninvasive assessment for coral health. We conducted cold and heat stress treatments on the branching coral Acropora yongei, and found that green fluorescent protein (GFP) concentration and fluorescence decreased with declining coral health, prior to initiation of bleaching. Ultimately, cold-treated corals acclimated and GFP concentration and fluorescence recovered. In contrast, heat-treated corals eventually bleached but showed strong fluorescence despite reduced GFP concentration, likely resulting from the large reduction in shading from decreased dinoflagellate density. Consequently, GFP concentration and fluorescence showed distinct correlations in non-bleached and bleached corals. Green fluorescence was positively correlated with dinoflagellate photobiology, but its closest correlation was with coral growth suggesting that green fluorescence could be used as a physiological proxy for health in some corals.

  2. A too acid world for coral reefs; Un monde trop acide pour les recifs coralliens

    Energy Technology Data Exchange (ETDEWEB)

    Allemand, D.; Reynaud, St. [Centre Scientifique de Monaco (Monaco); Universite de Nice-Sofia Antipolis, 06 (France); Salvat, B. [Universite de Perpignan, USR-3278 CNRS - EPHE, 66 (France)

    2010-09-15

    While briefly presenting how corals grow and exchange with their environment and after having recalled that temperature increase was already a threat for them, this article outlines that ocean acidification is now considered as another danger. This acidification is due to the dissolution in sea water of CO{sub 2} produced by human activities. This entails a slower calcification which is the process by which corals grow their skeleton. But, some researches showed that some corals manage to survive normally in such acid conditions, and even without skeleton for some other species. Anyhow, coral reefs will tend to disappear with environmental and socio-economical consequences

  3. Hurricanes and coral reefs: The intermediate disturbance hypothesis revisited

    Science.gov (United States)

    Rogers, C. S.

    1993-11-01

    A review of research on the effects of hurricanes on coral reefs suggests that the intermediate disturbance hypothesis may be applicable to shallow reef zones dominated by branching or foliaceous coral species that are especially susceptible to mechanical damage from storms. Diversity ( H') increases because of an increase in evenness following destruction or removal of the species that was monopolizing the space. The intermediate disturbance hypothesis as presented by Connell focuses on changes in number of species, but should be expanded to include diversity ( H') and evenness. It should also be modified to incorporate changes in living cover and the time elapsed since disturbances of varying intensities. This hypothesis predicts that when cover is high, diversity will be low. However, research on coral reefs does not consistently demonstrate an inverse correlation of coral diversity, and coral cover. An increase in cover and decrease in diversity with depth would also be expected because deeper reef zones generally experience less disturbance. However, higher diversity (both H' and species richness) is often associated with deeper zones. The effects of hurricanes on coral reefs will depend on the temporal and spatial scales under consideration, the life history characteristics and morphology of the dominant species, the depth of the reef zone, the ecological history of the site, and the influence of any additional natural or human stresses.

  4. Project Overview: A Reef Manager's Guide to Coral Bleaching ...

    Science.gov (United States)

    The purpose of this report is to provide the latest scientific knowledge and discuss available management options to assist local and regional managers in responding effectively to mass coral bleaching events. Background A Reef Manager’s Guide to Coral Bleaching is the result of a collaborative effort by over 50 scientists and managers to: (1) share the best available scientific information on climate-related coral bleaching; and (2) compile a tool kit of currently available strategies for adaptive management of coral reefs in a changing climate. The result is a compendium of current information, tools, and practical suggestions to aid managers in their efforts to protect reefs in a way that maximizes reef resilience in the face of continuing climate change. The Guide is a joint publication of the National Oceanic and Atmospheric Administration, the Great Barrier Reef Marine Park Authority, and The World Conservation Union, with author contributions from a variety of international partners from government agencies, non-governmental organizations, and academic institutions. EPA’s Office of Research and Development was a major contributor to the Guide through authorship and participation in the final review and editing process for the entire report. A Reef Manager’s Guide to Coral Bleaching is the result of a collaborative effort by over 50 scientists and managers to: (1) share the best available scientific information on climate-related coral blea

  5. Facilitation in Caribbean coral reefs: high densities of staghorn coral foster greater coral condition and reef fish composition.

    Science.gov (United States)

    Huntington, Brittany E; Miller, Margaret W; Pausch, Rachel; Richter, Lee

    2017-05-01

    Recovery of the threatened staghorn coral (Acropora cervicornis) is posited to play a key role in Caribbean reef resilience. At four Caribbean locations (including one restored and three extant populations), we quantified characteristics of contemporary staghorn coral across increasing conspecific densities, and investigated a hypothesis of facilitation between staghorn coral and reef fishes. High staghorn densities in the Dry Tortugas exhibited significantly less partial mortality, higher branch growth, and supported greater fish abundances compared to lower densities within the same population. In contrast, partial mortality, branch growth, and fish community composition did not vary with staghorn density at the three other study locations where staghorn densities were lower overall. This suggests that density-dependent effects between the coral and fish community may only manifest at high staghorn densities. We then evaluated one facilitative mechanism for such density-dependence, whereby abundant fishes sheltering in dense staghorn aggregations deliver nutrients back to the coral, fueling faster coral growth, thereby creating more fish habitat. Indeed, dense staghorn aggregations within the Dry Tortugas exhibited significantly higher growth rates, tissue nitrogen, and zooxanthellae densities than sparse aggregations. Similarly, higher tissue nitrogen was induced in a macroalgae bioassay outplanted into the same dense and sparse aggregations, confirming greater bioavailability of nutrients at high staghorn densities. Our findings inform staghorn restoration efforts, suggesting that the most effective targets may be higher coral densities than previously thought. These coral-dense aggregations may reap the benefits of positive facilitation between the staghorn and fish community, favoring the growth and survivorship of this threatened species.

  6. Physiology can contribute to better understanding, management, and conservation of coral reef fishes.

    Science.gov (United States)

    Illing, Björn; Rummer, Jodie L

    2017-01-01

    Coral reef fishes, like many other marine organisms, are affected by anthropogenic stressors such as fishing and pollution and, owing to climate change, are experiencing increasing water temperatures and ocean acidification. Against the backdrop of these various stressors, a mechanistic understanding of processes governing individual organismal performance is the first step for identifying drivers of coral reef fish population dynamics. In fact, physiological measurements can help to reveal potential cause-and-effect relationships and enable physiologists to advise conservation management by upscaling results from cellular and individual organismal levels to population levels. Here, we highlight studies that include physiological measurements of coral reef fishes and those that give advice for their conservation. A literature search using combined physiological, conservation and coral reef fish key words resulted in ~1900 studies, of which only 99 matched predefined requirements. We observed that, over the last 20 years, the combination of physiological and conservation aspects in studies on coral reef fishes has received increased attention. Most of the selected studies made their physiological observations at the whole organism level and used their findings to give conservation advice on population dynamics, habitat use or the potential effects of climate change. The precision of the recommendations differed greatly and, not surprisingly, was least concrete when studies examined the effects of projected climate change scenarios. Although more and more physiological studies on coral reef fishes include conservation aspects, there is still a lack of concrete advice for conservation managers, with only very few published examples of physiological findings leading to improved management practices. We conclude with a call to action to foster better knowledge exchange between natural scientists and conservation managers to translate physiological findings more

  7. Divergence of seafloor elevation and sea level rise in coral reef ecosystems

    Science.gov (United States)

    Yates, Kimberly K.; Zawada, David G.; Smiley, Nathan A.; Tiling-Range, Ginger

    2017-01-01

    Coral reefs serve as natural barriers that protect adjacent shorelines from coastal hazards such as storms, waves, and erosion. Projections indicate global degradation of coral reefs due to anthropogenic impacts and climate change will cause a transition to net erosion by mid-century. Here, we provide a comprehensive assessment of the combined effect of all of the processes affecting seafloor accretion and erosion by measuring changes in seafloor elevation and volume for five coral reef ecosystems in the Atlantic, Pacific, and Caribbean over the last several decades. Regional-scale mean elevation and volume losses were observed at all five study sites and in 77 % of the 60 individual habitats that we examined across all study sites. Mean seafloor elevation losses for whole coral reef ecosystems in our study ranged from −0.09 to −0.8 m, corresponding to net volume losses ranging from 3.4  ×  106 to 80.5  ×  106 m3 for all study sites. Erosion of both coral-dominated substrate and non-coral substrate suggests that the current rate of carbonate production is no longer sufficient to support net accretion of coral reefs or adjacent habitats. We show that regional-scale loss of seafloor elevation and volume has accelerated the rate of relative sea level rise in these regions. Current water depths have increased to levels not predicted until near the year 2100, placing these ecosystems and nearby communities at elevated and accelerating risk to coastal hazards. Our results set a new baseline for projecting future impacts to coastal communities resulting from degradation of coral reef systems and associated losses of natural and socioeconomic resources.

  8. Embracing a world of subtlety and nuance on coral reefs

    Science.gov (United States)

    Mumby, Peter J.

    2017-09-01

    Climate change will homogenise the environment and generate a preponderance of mediocre reefs. Managing seascapes of mediocrity will be challenging because our science is ill prepared to deal with the `shades of grey' of reef health; we tend to study natural processes in the healthiest reefs available. Yet much can be gained by examining the drivers and implications of even subtle changes in reef state. Where strong ecological interactions are discovered, even small changes in abundance can have profound impacts on coral resilience. Indeed, if we are to develop effective early warnings of critical losses of resilience, then monitoring must place greater emphasis on measuring and interpreting changes in reef recovery rates. In terms of mechanism, a more nuanced approach is needed to explore the generality of what might be considered `dogma'. A more nuanced approach to science will serve managers needs well and help minimise the rise of mediocrity in coral reef ecosystems.

  9. Risks to coral reefs from ocean carbonate chemistry changes in recent earth system model projections

    Science.gov (United States)

    Ricke, K. L.; Orr, J. C.; Schneider, K.; Caldeira, K.

    2013-09-01

    Coral reefs are among the most biodiverse ecosystems in the world. Today they are threatened by numerous stressors, including warming ocean waters and coastal pollution. Here we focus on the implications of ocean acidification for the open ocean chemistry surrounding coral reefs, as estimated from earth system models participating in the Coupled Model Intercomparison Project, Phase 5 (CMIP5). We project risks to reefs in the context of three potential aragonite saturation (Ωa) thresholds. We find that in preindustrial times, 99.9% of reefs adjacent to open ocean in the CMIP5 ensemble were located in regions with Ωa > 3.5. Under a business-as-usual scenario (RCP 8.5), every coral reef considered will be surrounded by water with Ωa reefs’ long-term fate is independent of their specific saturation threshold. However, under scenarios with significant CO2 emissions abatement, the Ωa threshold for reefs is critical to projecting their fate. Our results indicate that to maintain a majority of reefs surrounded by waters with Ωa > 3.5 to the end of the century, very aggressive reductions in emissions are required. The spread of Ωa projections across models in the CMIP5 ensemble is narrow, justifying a high level of confidence in these results.

  10. SIMAC: development and implementation of a coral reef monitoring network in Colombia.

    Science.gov (United States)

    Garzón-Ferreira, Jaime; Rodríguez-Ramírez, Alberto

    2010-05-01

    Significant coral reef decline has been observed in Colombia during the last three decades. However, due to the lack of monitoring activities, most of the information about health and changes was fragmentary or inadequate. To develop an expanded nation-wide reef-monitoring program, in 1998 INVEMAR (Instituto de Investigaciones Marinas y Costeras: "Colombian Institute of Marine and Coastal Research") designed and implemented SIMAC (Sistema Nacional de Monitorco de Arrecifes Coralinos en Colombia: "National Monitoring System of Coral Reefs in Colombia") with the participation of other institutions. By the end of 2003 the SIMAC network reached more than twice its initial size, covering ten reef areas (seven in the Caribbean and three in the Pacific), 63 reef sites and 263 permanent transects. SIMAC monitoring continued without interruption until 2008 and should persist in the long-term. The SIMAC has a large database and consists basically of water quality measurements (temperature, salinity, turbidity) and a yearly estimation of benthic reef cover, coral disease prevalence, gorgonian density, abundance of important mobile invertebrates, fish diversity and abundance of important fish species. A methods manual is available in the Internet. Data and results of SIMAC have been widely circulated through a summary report published annually since 2000 for the Colombian environmental agencies and the general public, as well as numerous national and international scientific papers and presentations at meetings. SIMAC information has contributed to support regional and global reef monitoring networks and databases (i.e. CARICOMP, GCRMN, ReefBase).

  11. Microbial and sponge loops modify fish production in phase-shifting coral reefs.

    Science.gov (United States)

    Silveira, Cynthia B; Silva-Lima, Arthur W; Francini-Filho, Ronaldo B; Marques, Jomar S M; Almeida, Marcelo G; Thompson, Cristiane C; Rezende, Carlos E; Paranhos, Rodolfo; Moura, Rodrigo L; Salomon, Paulo S; Thompson, Fabiano L

    2015-10-01

    Shifts from coral to algae dominance of corals reefs have been correlated to fish biomass loss and increased microbial metabolism. Here we investigated reef benthic and planktonic primary production, benthic dissolved organic carbon (DOC) release and bacterial growth efficiency in the Abrolhos Bank, South Atlantic. Benthic DOC release rates are higher while water column bacterial growth efficiency is lower at impacted reefs. A trophic model based on the benthic and planktonic primary production was able to predict the observed relative fish biomass in healthy reefs. In contrast, in impacted reefs, the observed omnivorous fish biomass is higher, while that of the herbivorous/coralivorous fish is lower than predicted by the primary production-based model. Incorporating recycling of benthic-derived carbon in the model through microbial and sponge loops explains the difference and predicts the relative fish biomass in both reef types. Increased benthic carbon release rates and bacterial carbon metabolism, but decreased bacterial growth efficiency could lead to carbon losses through respiration and account for the uncoupling of benthic and fish production in phase-shifting reefs. Carbon recycling by microbial and sponge loops seems to promote an increase of small-bodied fish productivity in phase-shifting coral reefs. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

  12. Morphogenesis of the branching reef coral Madracis mirabilis

    NARCIS (Netherlands)

    Kaandorp, J.A.; Sloot, P.M.A.; Merks, R.M.H.; Bak, R.P.M.; Vermeij, M.J.A.; Maier, C.

    2005-01-01

    Understanding external deciding factors in growth and morphology of reef corals is essential to elucidate the role of corals in marine ecosystems, and to explain their susceptibility to pollution and global climate change. Here, we extend on a previously presented model for simulating the growth and

  13. Trans-Atlantic rafting by the brooding reef coral

    NARCIS (Netherlands)

    Hoeksema, B.W.; Roos, P.J.; Cadée, G.C.

    2012-01-01

    including corrigendumSpecimens of the brooding reef coral Favia fragum were found on man-made flotsam stranded on the North Sea shore of the Netherlands. Based on the associated epifauna originating from the southeast USA, we estimate that the corals must have crossed the Atlantic Ocean, transported

  14. Trans-Atlantic rafting by the brooding reef coral

    NARCIS (Netherlands)

    Hoeksema, B.W.; Roos, P.J.; Cadée, G.C.

    2012-01-01

    Specimens of the brooding reef coral Favia fragum were found on man-made flotsam stranded on the North Sea shore of the Netherlands. Based on the associated epifauna originating from the southeast USA, we estimate that the corals must have crossed the Atlantic Ocean, transported by the Gulf Stream a

  15. Human Impacts on Coral Reefs in the Sultanate of Oman

    Science.gov (United States)

    Al-Jufaili, S.; Al-Jabri, M.; Al-Baluchi, A.; Baldwin, R. M.; Wilson, S. C.; West, F.; Matthews, A. D.

    1999-08-01

    A rapid assessment survey of the coral reefs of the Sultanate of Oman was conducted by the Ministry of Regional Municipalities and Environment during the first half of 1996. The survey revealed new information on the distribution pattern of corals in Oman and identified impacts, threats and potential threats to coral communities for the purpose of preparation of a National Coral Reef Management Plan (Phase One of the implementation of a National Coastal Zone Management Plan). Impacts on coral reefs in Oman were found to be attributable to both natural and human causes, resulting in significant and widespread degradation. Damage resulting from fisheries activities was the most commonly recorded human impact, with the most severe effects. Other human impacts resulted from coastal construction, recreational activities, oil pollution and eutrophication. Predation of corals by Acanthaster planci, damage caused by storms, coral diseases and temperature-related stress were the most commonly recorded natural impacts to coral reefs. Further minor natural impacts were attributable to siltation, rock falls and predation by a corallivorous gastropod (Drupella sp.). Significant differences between different areas of the country were found in terms of human impacts on coral reefs and these were related to coastal demography and human activity. Eighty per cent of sites studied were recorded to have been affected by human impacts to some degree. Impacts attributable to fisheries activities were found at 69% of the sites. Lost or abandoned gill nets were found to affect coral reefs at 49% of sites throughout Oman and accounted for 70% of all severe human impacts. Lost gill nets were also found to have a negative affect on fisheries resources and other marine wildlife. Observations of the behaviour of gill nets on coral reefs suggested a predictable pattern of damage over time and a significant increase in damage intensity during storms. Fishing nets were found to act selectively

  16. Topography and biological noise determine acoustic detectability on coral reefs

    Science.gov (United States)

    Cagua, E. F.; Berumen, M. L.; Tyler, E. H. M.

    2013-12-01

    Acoustic telemetry is an increasingly common tool for studying the movement patterns, behavior and site fidelity of marine organisms, but to accurately interpret acoustic data, the variability, periodicity and range of detectability between acoustic tags and receivers must be understood. The relative and interactive effects of topography with biological and environmental noise have not been quantified on coral reefs. We conduct two long-term range tests (1- and 4-month duration) on two different reef types in the central Red Sea to determine the relative effect of distance, depth, topography, time of day, wind, lunar phase, sea surface temperature and thermocline on detection probability. Detectability, as expected, declines with increasing distance between tags and receivers, and we find average detection ranges of 530 and 120 m, using V16 and V13 tags, respectively, but the topography of the reef can significantly modify this relationship, reducing the range by ~70 %, even when tags and receivers are in line-of-sight. Analyses that assume a relationship between distance and detections must therefore be used with care. Nighttime detection range was consistently reduced in both locations, and detections varied by lunar phase in the 4-month test, suggesting a strong influence of biological noise (reducing detection probability up to 30 %), notably more influential than other environmental noises, including wind-driven noise, which is normally considered important in open-water environments. Analysis of detections should be corrected in consideration of the diel patterns we find, and range tests or sentinel tags should be used for more than 1 month to quantify potential changes due to lunar phase. Some studies assume that the most usual factor limiting detection range is weather-related noise; this cannot be extrapolated to coral reefs.

  17. Topography and biological noise determine acoustic detectability on coral reefs

    KAUST Repository

    Cagua, Edgar F.

    2013-08-19

    Acoustic telemetry is an increasingly common tool for studying the movement patterns, behavior and site fidelity of marine organisms, but to accurately interpret acoustic data, the variability, periodicity and range of detectability between acoustic tags and receivers must be understood. The relative and interactive effects of topography with biological and environmental noise have not been quantified on coral reefs. We conduct two long-term range tests (1- and 4-month duration) on two different reef types in the central Red Sea to determine the relative effect of distance, depth, topography, time of day, wind, lunar phase, sea surface temperature and thermocline on detection probability. Detectability, as expected, declines with increasing distance between tags and receivers, and we find average detection ranges of 530 and 120 m, using V16 and V13 tags, respectively, but the topography of the reef can significantly modify this relationship, reducing the range by ~70 %, even when tags and receivers are in line-of-sight. Analyses that assume a relationship between distance and detections must therefore be used with care. Nighttime detection range was consistently reduced in both locations, and detections varied by lunar phase in the 4-month test, suggesting a strong influence of biological noise (reducing detection probability up to 30 %), notably more influential than other environmental noises, including wind-driven noise, which is normally considered important in open-water environments. Analysis of detections should be corrected in consideration of the diel patterns we find, and range tests or sentinel tags should be used for more than 1 month to quantify potential changes due to lunar phase. Some studies assume that the most usual factor limiting detection range is weather-related noise; this cannot be extrapolated to coral reefs. © 2013 Springer-Verlag Berlin Heidelberg.

  18. Reef scent: How brooded coral larvae from a tough coral smell their way to a new home

    Science.gov (United States)

    Spies, N.; Richmond, R. H.; Seneca, F.; Murphy, J.; Martinez, J.; Lyman, A.

    2016-02-01

    Coral reefs are highly diverse marine ecosystems of ecological, economic, and cultural value. With the expected negative effects on reefs from global climate change including rising sea temperatures and ocean acidification, the identification of resilient coral species has become increasingly important. Leptastrea purpurea is an encrusting coral that is found throughout the Indo-Pacific and Red Sea. While most corals are broadcast spawners, releasing sperm and eggs to be fertilized in the water column, some corals brood embryos within their tissues after internal fertilization. L. purpurea appears to release planula larvae on a continuous basis from the parent colony as observed during two years of monitoring. The planula larvae show remarkable resilience under a wide range of stressful conditions including temperature, sediment, and chemical stressors, as well as the ability to successfully settle and metamorphose after 180 days in controlled laboratory conditions. Various smells were tested to identify a settlement cue for L. purpurea larvae, and our results suggest that the smell associated with other coral colonies induce larval settlement and metamorphosis. Knowledge of the settlement cues and reproductive biology of this coral is important to our understanding of coral resilience in the face of anthropogenic perturbation.

  19. Resilience and climate change: lessons from coral reefs and bleaching in the Western Indian Ocean

    Science.gov (United States)

    Obura, David O.

    2005-05-01

    The impact of climate change through thermal stress-related coral bleaching on coral reefs of the Western Indian Ocean has been well documented and is caused by rising sea water temperatures associated with background warming trends and extreme climate events. Recent studies have identified a number of factors that may reduce the impact of coral bleaching and mortality at a reef or sub-reef level. However, there is little scientific consensus as yet, and it is unclear how well current science supports the immediate needs of management responses to climate change. This paper provides evidence from the Western Indian Ocean in support of recent hypotheses on coral and reef vulnerability to thermal stress that have been loosely termed 'resistance and resilience to bleaching'. The paper argues for a more explicit definition of terms, and identifies three concepts affecting coral-zooxanthellae holobiont and reef vulnerability to thermal stress previously termed 'resistance to bleaching': 'thermal protection', where some reefs are protected from the thermal conditions that induce bleaching and/or where local physical conditions reduce bleaching and mortality levels; 'thermal resistance', where individual corals bleach to differing degrees to the same thermal stress; and 'thermal tolerance', where individual corals suffer differing levels of mortality when exposed to the same thermal stress. 'Resilience to bleaching' is a special case of ecological resilience, where recovery following large-scale bleaching mortality varies according to ecological and other processes. These concepts apply across multiple levels of biological organization and temporal and spatial scales. Thermal resistance and tolerance are genetic properties and may interact with environmental protection properties resulting in phenotypic variation in bleaching and mortality of corals. The presence or absence of human threats and varying levels of reef management may alter the influence of the above factors

  20. Acute ecotoxicology of natural oil and gas condensate to coral reef larvae.

    Science.gov (United States)

    Negri, Andrew P; Brinkman, Diane L; Flores, Florita; Botté, Emmanuelle S; Jones, Ross J; Webster, Nicole S

    2016-02-19

    Risks posed by oil spills to coral reefs are difficult to evaluate, partially due to the absence of studies that adequately assess toxicity to relevant coral reef species. Here we experimentally tested the acute toxicity of condensate, representing a fraction of light crude oil, to coral (Acropora tenuis) and sponge (Rhopaloeides odorabile) larvae. The metamorphosis of coral larvae was inhibited at total petroleum aromatic hydrocarbon (TPAH) concentrations of water accommodated fractions (WAF) as low as 103 μg l(-1), similar to concentrations detected in seawater following large spills. The sensitivity of coral larvae increased by 40% when co-exposed to UV light that they might encounter in shallow reefal systems. Condensate WAF was more toxic to coral larvae than predicted by summing the toxicity of its main components (benzene, toluene, p-xylene and napthalene). In contrast, the sensitivity of sponge larvae to condensate WAF (>10,000 μg l(-1) TPAH) was far less than coral in the presence and absence of UV, but similar to that of other marine invertebrates. While these results highlight the relative sensitivity of coral larvae to oil, further research is needed to better understand and predict the impacts and risks posed by hydrocarbons to tropical reef systems.

  1. Acute ecotoxicology of natural oil and gas condensate to coral reef larvae

    Science.gov (United States)

    Negri, Andrew P.; Brinkman, Diane L.; Flores, Florita; Botté, Emmanuelle S.; Jones, Ross J.; Webster, Nicole S.

    2016-02-01

    Risks posed by oil spills to coral reefs are difficult to evaluate, partially due to the absence of studies that adequately assess toxicity to relevant coral reef species. Here we experimentally tested the acute toxicity of condensate, representing a fraction of light crude oil, to coral (Acropora tenuis) and sponge (Rhopaloeides odorabile) larvae. The metamorphosis of coral larvae was inhibited at total petroleum aromatic hydrocarbon (TPAH) concentrations of water accommodated fractions (WAF) as low as 103 μg l‑1, similar to concentrations detected in seawater following large spills. The sensitivity of coral larvae increased by 40% when co-exposed to UV light that they might encounter in shallow reefal systems. Condensate WAF was more toxic to coral larvae than predicted by summing the toxicity of its main components (benzene, toluene, p-xylene and napthalene). In contrast, the sensitivity of sponge larvae to condensate WAF (>10,000 μg l‑1 TPAH) was far less than coral in the presence and absence of UV, but similar to that of other marine invertebrates. While these results highlight the relative sensitivity of coral larvae to oil, further research is needed to better understand and predict the impacts and risks posed by hydrocarbons to tropical reef systems.

  2. Mapping seagrass beds and coral reefs in the coastal region of Vietnam using VNREDSAT-1 data

    Science.gov (United States)

    Lau, K. V.; Chen, C. F.; Nguyen, S. T.; Chen, C. R.; Tong Phuoc, H. S.; Nguyen, H. H.

    2015-12-01

    Seagrass beds and coral reefs are two important ecosystems in the coastal zone. They play an important role to protect and shelter various marine organisms. Both seagrass beds and coral reefs could prevent the coastline from erosion. While seagrass stabilizes sediments and acts as a biofilter, coral reefs can control carbon dioxide in the ocean water. Besides, seagrass also provides direct food for many fish and marine animals. Therefore, mapping seagrass beds and coral reefs is very important for coastal management and conservation. In May 2013, Vietnam launched the first satellite for earth observations, called Vietnam Natural Resources, Environment and Disaster Monitoring Satellite (VNREDSAT-1). It is a great opportunity for environmental monitoring in the country using the data from this satellite. The objective of this study is to use the VNREDSAT-1 data to map seagrass beds and coral reefs in the coastal region of Ninh Hai district, Ninh Thuan province, Vietnam, where the seagrass still remains in good a condition. We processed the VNREDSAT-1 image through four steps: (1) Atmospheric correction using Second Simulation of the Satellite Signal in the Solar Spectrum radiative transfer model (6S), (2) Sun glint removal by using Hedley method, (3) Water column correction using the depth-variant index (DII) proposed by Lyzenga, and (4) Image classification using the maximum likelihood algorithm. The mapping results verified with the ground reference data showed a good overall accuracy of 75% and Kappa coefficient of 0.7. The total area of seagrass beds was approximately 323.09 ha, which mainly distributed in My Hoa and Thai An villages. The total area of coral reefs was approximately 564.42 ha, located along the coast and on outer area to seagrass and shoreline reefs. This study demonstrates the applicability of VNREDSAT-1 for underwater habitat monitoring. The results could be useful for natural resources managers to devise strategies for management and

  3. Spatial and temporal genetic structure of Symbiodinium populations within a common reef-building coral on the Great Barrier Reef.

    Science.gov (United States)

    Howells, Emily J; Willis, Bette L; Bay, Line K; van Oppen, Madeleine J H

    2013-07-01

    The dinoflagellate photosymbiont Symbiodinium plays a fundamental role in defining the physiological tolerances of coral holobionts, but little is known about the dynamics of these endosymbiotic populations on coral reefs. Sparse data indicate that Symbiodinium populations show limited spatial connectivity; however, no studies have investigated temporal dynamics for in hospite Symbiodinium populations following significant mortality and recruitment events in coral populations. We investigated the combined influences of spatial isolation and disturbance on the population dynamics of the generalist Symbiodinium type C2 (ITS1 rDNA) hosted by the scleractinian coral Acropora millepora in the central Great Barrier Reef. Using eight microsatellite markers, we genotyped Symbiodinium in a total of 401 coral colonies, which were sampled from seven sites across a 12-year period including during flood plume-induced coral bleaching. Genetic differentiation of Symbiodinium was greatest within sites, explaining 70-86% of the total genetic variation. An additional 9-27% of variation was explained by significant differentiation of populations among sites separated by 0.4-13 km, which is consistent with low levels of dispersal via water movement and historical disturbance regimes. Sampling year accounted for 6-7% of total genetic variation and was related to significant coral mortality following severe bleaching in 1998 and a cyclone in 2006. Only 3% of the total genetic variation was related to coral bleaching status, reflecting generally small (8%) reductions in allelic diversity within bleached corals. This reduction probably reflected a loss of genotypes in hospite during bleaching, although no site-wide changes in genetic diversity were observed. Combined, our results indicate the importance of disturbance regimes acting together with limited oceanographic transport to determine the genetic composition of Symbiodinium types within reefs.

  4. Monitoring of Coral Reef Ecosystems on Maui, Hawaii during 1989-1998 (NODC Accession 9900242)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In an effort to detect spatial and temporal changes in the structure of the coral reef community, coral coverage and reef fish density and diversity were documented...

  5. Monitoring of Coral Reef Ecosystems on Maui, Hawaii during 1989-1998 (NODC Accession 9900242)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In an effort to detect spatial and temporal changes in the structure of the coral reef community, coral coverage and reef fish density and diversity were documented...

  6. Baseline Assessment of Coral Reefs in Timor-Leste from 2012 to 2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Supported by the U.S. Agency for International Development (USAID), the U.S Department of State, and NOAA's Coral Reef Conservation Program the PIFSC Coral Reef...

  7. Projecting coral reef futures under global warming and ocean acidification.

    Science.gov (United States)

    Pandolfi, John M; Connolly, Sean R; Marshall, Dustin J; Cohen, Anne L

    2011-07-22

    Many physiological responses in present-day coral reefs to climate change are interpreted as consistent with the imminent disappearance of modern reefs globally because of annual mass bleaching events, carbonate dissolution, and insufficient time for substantial evolutionary responses. Emerging evidence for variability in the coral calcification response to acidification, geographical variation in bleaching susceptibility and recovery, responses to past climate change, and potential rates of adaptation to rapid warming supports an alternative scenario in which reef degradation occurs with greater temporal and spatial heterogeneity than current projections suggest. Reducing uncertainty in projecting coral reef futures requires improved understanding of past responses to rapid climate change; physiological responses to interacting factors, such as temperature, acidification, and nutrients; and the costs and constraints imposed by acclimation and adaptation.

  8. A unified model explains commonness and rarity on coral reefs.

    Science.gov (United States)

    Connolly, Sean R; Hughes, Terry P; Bellwood, David R

    2017-04-01

    Abundance patterns in ecological communities have important implications for biodiversity maintenance and ecosystem functioning. However, ecological theory has been largely unsuccessful at capturing multiple macroecological abundance patterns simultaneously. Here, we propose a parsimonious model that unifies widespread ecological relationships involving local aggregation, species-abundance distributions, and species associations, and we test this model against the metacommunity structure of reef-building corals and coral reef fishes across the western and central Pacific. For both corals and fishes, the unified model simultaneously captures extremely well local species-abundance distributions, interspecific variation in the strength of spatial aggregation, patterns of community similarity, species accumulation, and regional species richness, performing far better than alternative models also examined here and in previous work on coral reefs. Our approach contributes to the development of synthetic theory for large-scale patterns of community structure in nature, and to addressing ongoing challenges in biodiversity conservation at macroecological scales.

  9. Status of Caribbean coral reefs in seven countries in 1986.

    Science.gov (United States)

    Wilkinson, Clive; Nowak, Madeleine; Miller, Ian; Baker, Valonna

    2013-05-15

    There are few long-term datasets available to make reliable statements about trends in cover and structure in many coral reefs around the world. We present 27year old summary data of the cover of corals and other biota on Caribbean and Western Atlantic coral reefs in 7 countries collected in late 1985 and early 1986. These data were collected to support research on sponge populations and show relatively low coral cover on many of these reefs with particularly low cover of Acropora spp. We present these summaries to encourage other researchers to compare with current conditions or repeat the surveys to show long-term trends; the raw data will be supplied on request. Copyright © 2013 Elsevier Ltd. All rights reserved.

  10. Tsunami survey expedition: preliminary investigation of Maldivian coral reefs two weeks after the event.

    Science.gov (United States)

    Goffredo, Stefano; Piccinetti, Corrado; Zaccanti, Francesco

    2007-08-01

    On December 26th 2004, a earthquake west of Sumatra generated a devastating tsunami. Hundreds of thousands of people fell victim. Economic losses were greatest in those countries dependant on tourism. The impact in the Maldives on persons and things was modest. Immediately following the event and notwithstanding the lack of scientific data, the mass media gave catastrophic reports on the state of coral reefs in the area. This paper reports on the first survey on coral reefs in the Maldives after the Tsunami. Ocean walls, passes, inner reefs, and shoals in the North and South Malé atolls, were surveyed two weeks after the event. Significant damage was recorded in the passes in the South Malé atoll. Our observations showed that the damage was more or less extensive depending on latitude and topography. Sri Lanka may have broken the wave's rush, reducing the extent of the impact on northern atolls. The water's acceleration inside the passes was so intense as to cause reef collapses. The observed damage represents a minimum fraction of the entire coral reef system. Tourist perception of the area seems unchanged. These data may be used to disseminate correct information about the state of Maldives coral reefs, which would be useful in relaunching local economy.

  11. Shifts in coral reef biogeochemistry and resulting acidification linked to offshore productivity.

    Science.gov (United States)

    Yeakel, Kiley L; Andersson, Andreas J; Bates, Nicholas R; Noyes, Timothy J; Collins, Andrew; Garley, Rebecca

    2015-11-24

    Oceanic uptake of anthropogenic carbon dioxide (CO2) has acidified open-ocean surface waters by 0.1 pH units since preindustrial times. Despite unequivocal evidence of ocean acidification (OA) via open-ocean measurements for the past several decades, it has yet to be documented in near-shore and coral reef environments. A lack of long-term measurements from these environments restricts our understanding of the natural variability and controls of seawater CO2-carbonate chemistry and biogeochemistry, which is essential to make accurate predictions on the effects of future OA on coral reefs. Here, in a 5-y study of the Bermuda coral reef, we show evidence that variations in reef biogeochemical processes drive interannual changes in seawater pH and Ωaragonite that are partly controlled by offshore processes. Rapid acidification events driven by shifts toward increasing net calcification and net heterotrophy were observed during the summers of 2010 and 2011, with the frequency and extent of such events corresponding to increased offshore productivity. These events also coincided with a negative winter North Atlantic Oscillation (NAO) index, which historically has been associated with extensive offshore mixing and greater primary productivity at the Bermuda Atlantic Time-series Study (BATS) site. Our results reveal that coral reefs undergo natural interannual events of rapid acidification due to shifts in reef biogeochemical processes that may be linked to offshore productivity and ultimately controlled by larger-scale climatic and oceanographic processes.

  12. Avoiding coral reef functional collapse requires local and global action.

    Science.gov (United States)

    Kennedy, Emma V; Perry, Chris T; Halloran, Paul R; Iglesias-Prieto, Roberto; Schönberg, Christine H L; Wisshak, Max; Form, Armin U; Carricart-Ganivet, Juan P; Fine, Maoz; Eakin, C Mark; Mumby, Peter J

    2013-05-20

    Coral reefs face multiple anthropogenic threats, from pollution and overfishing to the dual effects of greenhouse gas emissions: rising sea temperature and ocean acidification. While the abundance of coral has declined in recent decades, the implications for humanity are difficult to quantify because they depend on ecosystem function rather than the corals themselves. Most reef functions and ecosystem services are founded on the ability of reefs to maintain their three-dimensional structure through net carbonate accumulation. Coral growth only constitutes part of a reef's carbonate budget; bioerosion processes are influential in determining the balance between net structural growth and disintegration. Here, we combine ecological models with carbonate budgets and drive the dynamics of Caribbean reefs with the latest generation of climate models. Budget reconstructions using documented ecological perturbations drive shallow (6-10 m) Caribbean forereefs toward an increasingly fragile carbonate balance. We then projected carbonate budgets toward 2080 and contrasted the benefits of local conservation and global action on climate change. Local management of fisheries (specifically, no-take marine reserves) and the watershed can delay reef loss by at least a decade under "business-as-usual" rises in greenhouse gas emissions. However, local action must be combined with a low-carbon economy to prevent degradation of reef structures and associated ecosystem services. Copyright © 2013 Elsevier Ltd. All rights reserved.

  13. Phase shifts, herbivory, and the resilience of coral reefs to climate change.

    Science.gov (United States)

    Hughes, Terence P; Rodrigues, Maria J; Bellwood, David R; Ceccarelli, Daniela; Hoegh-Guldberg, Ove; McCook, Laurence; Moltschaniwskyj, Natalie; Pratchett, Morgan S; Steneck, Robert S; Willis, Bette

    2007-02-20

    Many coral reefs worldwide have undergone phase shifts to alternate, degraded assemblages because of the combined effects of over-fishing, declining water quality, and the direct and indirect impacts of climate change. Here, we experimentally manipulated the density of large herbivorous fishes to test their influence on the resilience of coral assemblages in the aftermath of regional-scale bleaching in 1998, the largest coral mortality event recorded to date. The experiment was undertaken on the Great Barrier Reef, within a no-fishing reserve where coral abundances and diversity had been sharply reduced by bleaching. In control areas, where fishes were abundant, algal abundance remained low, whereas coral cover almost doubled (to 20%) over a 3 year period, primarily because of recruitment of species that had been locally extirpated by bleaching. In contrast, exclusion of large herbivorous fishes caused a dramatic explosion of macroalgae, which suppressed the fecundity, recruitment, and survival of corals. Consequently, management of fish stocks is a key component in preventing phase shifts and managing reef resilience. Importantly, local stewardship of fishing effort is a tractable goal for conservation of reefs, and this local action can also provide some insurance against larger-scale disturbances such as mass bleaching, which are impractical to manage directly.

  14. Guam Long-term Coral Reef Monitoring Program Reef Fish Surveys since 2010

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Government of Guam's Long-term Coral Reef Monitoring Program, coordinated by the Guam Coastal Management Program until October 2013 and now coordinated by the...

  15. Spatial competition dynamics between reef corals under ocean acidification

    Science.gov (United States)

    Horwitz, Rael; Hoogenboom, Mia O.; Fine, Maoz

    2017-01-01

    Climate change, including ocean acidification (OA), represents a major threat to coral-reef ecosystems. Although previous experiments have shown that OA can negatively affect the fitness of reef corals, these have not included the long-term effects of competition for space on coral growth rates. Our multispecies year-long study subjected reef-building corals from the Gulf of Aqaba (Red Sea) to competitive interactions under present-day ocean pH (pH 8.1) and predicted end-of-century ocean pH (pH 7.6). Results showed coral growth is significantly impeded by OA under intraspecific competition for five out of six study species. Reduced growth from OA, however, is negligible when growth is already suppressed in the presence of interspecific competition. Using a spatial competition model, our analysis indicates shifts in the competitive hierarchy and a decrease in overall coral cover under lowered pH. Collectively, our case study demonstrates how modified competitive performance under increasing OA will in all likelihood change the composition, structure and functionality of reef coral communities. PMID:28067281

  16. Spatial competition dynamics between reef corals under ocean acidification

    Science.gov (United States)

    Horwitz, Rael; Hoogenboom, Mia O.; Fine, Maoz

    2017-01-01

    Climate change, including ocean acidification (OA), represents a major threat to coral-reef ecosystems. Although previous experiments have shown that OA can negatively affect the fitness of reef corals, these have not included the long-term effects of competition for space on coral growth rates. Our multispecies year-long study subjected reef-building corals from the Gulf of Aqaba (Red Sea) to competitive interactions under present-day ocean pH (pH 8.1) and predicted end-of-century ocean pH (pH 7.6). Results showed coral growth is significantly impeded by OA under intraspecific competition for five out of six study species. Reduced growth from OA, however, is negligible when growth is already suppressed in the presence of interspecific competition. Using a spatial competition model, our analysis indicates shifts in the competitive hierarchy and a decrease in overall coral cover under lowered pH. Collectively, our case study demonstrates how modified competitive performance under increasing OA will in all likelihood change the composition, structure and functionality of reef coral communities.

  17. Foraminifera as bioindicators in coral reef assessment and monitoring: The foram index

    Science.gov (United States)

    Hallock, P.; Lidz, B.H.; Cockey-Burkhard, E. M.; Donnelly, K.B.

    2003-01-01

    Coral reef communities are threatened worldwide. Resource managers urgently need indicators of the biological condition of reef environments that can relate data acquired through remote-sensing, water-quality and benthic-community monitoring to stress responses in reef organisms. The "FORAM" (Foraminifera in Reef Assessment and Monitoring) Index (FI) is based on 30 years of research on reef sediments and reef-dwelling larger foraminifers. These shelled protists are ideal indicator organisms because: ??? Foraminifers are widely used as environmental and paleoenvironmental indicators in many contexts; ??? Reef-building, zooxanthellate corals and foraminifers with algal symbionts have similar water-quality requirements; ??? The relatively short life spans of foraminifers as compared with long-lived colonial corals facilitate differentiation between long-term water-quality decline and episodic stress events; ??? Foraminifers are relatively small and abundant, permitting statistically significant sample sizes to be collected quickly and relatively inexpensively, ideally as a component of comprehensive monitoring programs; and ??? Collection of foraminifers has minimal impact on reef resources. USEPA guidelines for ecological indicators are used to evaluate the FI. Data required are foraminiferal assemblages from surface sediments of reef-associated environments. The FI provides resource managers with a simple procedure for determining the suitability of benthic environments for communities dominated by algal symbiotic organisms. The FI can be applied independently, or incorporated into existing or planned monitoring efforts. The simple calculations require limited computer capabilities and therefore can be applied readily to reef-associated environments worldwide. In addition, the foraminiferal shells collected can be subjected to morphometric and geochemical analyses in areas of suspected heavy-metal pollution, and the data sets for the index can be used with other

  18. Shifts in coral-assemblage composition do not ensure persistence of reef functionality.

    Science.gov (United States)

    Alvarez-Filip, Lorenzo; Carricart-Ganivet, Juan P; Horta-Puga, Guillermo; Iglesias-Prieto, Roberto

    2013-12-12

    Coral communities are changing rapidly worldwide through loss of coral cover and shifts in species composition. Although many reef-building corals are likely to decline, some weedy opportunistic species might increase in abundance. Here we explore whether the reshuffling of species can maintain ecosystem integrity and functioning. Using four common Caribbean reef-building coral genera we modeled rates of reef construction and complexity. We show that shifting coral assemblages result in rapid losses in coral-community calcification and reef rugosity that are independent of changes in the total abundance of reef corals. These losses are considerably higher than those recently attributed to climate change. Dominance patterns of coral assemblages seem to be the most important driver of the functioning of coral reefs and thus, the future of these ecosystems might depend not only on reductions of local and global stressors, but also on the maintenance of keystone coral species.

  19. Elevated Colonization of Microborers at a Volcanically Acidified Coral Reef

    Science.gov (United States)

    Enochs, Ian C.; Manzello, Derek P.; Tribollet, Aline; Valentino, Lauren; Kolodziej, Graham; Donham, Emily M.; Fitchett, Mark D.; Carlton, Renee; Price, Nichole N.

    2016-01-01

    Experiments have demonstrated that ocean acidification (OA) conditions projected to occur by the end of the century will slow the calcification of numerous coral species and accelerate the biological erosion of reef habitats (bioerosion). Microborers, which bore holes less than 100 μm diameter, are one of the most pervasive agents of bioerosion and are present throughout all calcium carbonate substrates within the reef environment. The response of diverse reef functional groups to OA is known from real-world ecosystems, but to date our understanding of the relationship between ocean pH and carbonate dissolution by microborers is limited to controlled laboratory experiments. Here we examine the settlement of microborers to pure mineral calcium carbonate substrates (calcite) along a natural pH gradient at a volcanically acidified reef at Maug, Commonwealth of the Northern Mariana Islands (CNMI). Colonization of pioneer microborers was higher in the lower pH waters near the vent field. Depth of microborer penetration was highly variable both among and within sites (4.2–195.5 μm) over the short duration of the study (3 mo.) and no clear relationship to increasing CO2 was observed. Calculated rates of biogenic dissolution, however, were highest at the two sites closer to the vent and were not significantly different from each other. These data represent the first evidence of OA-enhancement of microboring flora colonization in newly available substrates and provide further evidence that microborers, especially bioeroding chlorophytes, respond positively to low pH. The accelerated breakdown and dissolution of reef framework structures with OA will likely lead to declines in structural complexity and integrity, as well as possible loss of essential habitat. PMID:27467570

  20. Behaviourally mediated phenotypic selection in a disturbed coral reef environment.

    Directory of Open Access Journals (Sweden)

    Mark I McCormick

    Full Text Available Natural and anthropogenic disturbances are leading to changes in the nature of many habitats globally, and the magnitude and frequency of these perturbations are predicted to increase under climate change. Globally coral reefs are one of the most vulnerable ecosystems to climate change. Fishes often show relatively rapid declines in abundance when corals become stressed and die, but the processes responsible are largely unknown. This study explored the mechanism by which coral bleaching may influence the levels and selective nature of mortality on a juvenile damselfish, Pomacentrus amboinensis, which associates with hard coral. Recently settled fish had a low propensity to migrate small distances (40 cm between habitat patches, even when densities were elevated to their natural maximum. Intraspecific interactions and space use differ among three habitats: live hard coral, bleached coral and dead algal-covered coral. Large fish pushed smaller fish further from the shelter of bleached and dead coral thereby exposing smaller fish to higher mortality than experienced on healthy coral. Small recruits suffered higher mortality than large recruits on bleached and dead coral. Mortality was not size selective on live coral. Survival was 3 times as high on live coral as on either bleached or dead coral. Subtle behavioural interactions between fish and their habitats influence the fundamental link between life history stages, the distribution of phenotypic traits in the local population and potentially the evolution of life history strategies.

  1. Sediments and herbivory as sensitive indicators of coral reef degradation

    Directory of Open Access Journals (Sweden)

    Christopher H. R. Goatley

    2016-03-01

    Full Text Available Around the world, the decreasing health of coral reef ecosystems has highlighted the need to better understand the processes of reef degradation. The development of more sensitive tools, which complement traditional methods of monitoring coral reefs, may reveal earlier signs of degradation and provide an opportunity for pre-emptive responses. We identify new, sensitive metrics of ecosystem processes and benthic composition that allow us to quantify subtle, yet destabilizing, changes in the ecosystem state of an inshore coral reef on the Great Barrier Reef. Following severe climatic disturbances over the period 2011-2012, the herbivorous reef fish community of the reef did not change in terms of biomass or functional groups present. However, fish-based ecosystem processes showed marked changes, with grazing by herbivorous fishes declining by over 90%. On the benthos, algal turf lengths in the epilithic algal matrix increased more than 50% while benthic sediment loads increased 37-fold. The profound changes in processes, despite no visible change in ecosystem state, i.e., no shift to macroalgal dominance, suggest that although the reef has not undergone a visible regime-shift, the ecosystem is highly unstable, and may sit on an ecological knife-edge. Sensitive, process-based metrics of ecosystem state, such as grazing or browsing rates thus appear to be effective in detecting subtle signs of degradation and may be critical in identifying ecosystems at risk for the future.

  2. Phytoplankton transport to coral reefs by internal solitons in the northern South China Sea

    Science.gov (United States)

    Wang, Yu-Huai

    2016-09-01

    Evidence is presented that waters containing high concentrations of chlorophyll are transported by internal waves to the fore-reef slope of Dongsha Atoll in the northern South China Sea. High vertical resolution mooring measurements of temperature, pressure, and chlorophyll fluorescence revealed that the internal soliton cores could transport chlorophyll vertically downward and increase concentrations by an order of magnitude near the seafloor, compared to background levels. The reef areas that are potentially nourished by the pulses of phytoplankton are dominated by alcyonacean soft corals, while other reef areas that are less or not at all affected by internal waves are dominated by scleractinian hard corals. This suggests that the delivery of phytoplankton by internal solitons provides a plentiful food source that benefits the growth of soft corals.

  3. Through bleaching and tsunami: Coral reef recovery in the Maldives.

    Science.gov (United States)

    Morri, Carla; Montefalcone, Monica; Lasagna, Roberta; Gatti, Giulia; Rovere, Alessio; Parravicini, Valeriano; Baldelli, Giuseppe; Colantoni, Paolo; Bianchi, Carlo Nike

    2015-09-15

    Coral reefs are degrading worldwide, but little information exists on their previous conditions for most regions of the world. Since 1989, we have been studying the Maldives, collecting data before, during and after the bleaching and mass mortality event of 1998. As early as 1999, many newly settled colonies were recorded. Recruits shifted from a dominance of massive and encrusting corals in the early stages of recolonisation towards a dominance of Acropora and Pocillopora by 2009. Coral cover, which dropped to less than 10% after the bleaching, returned to pre-bleaching values of around 50% by 2013. The 2004 tsunami had comparatively little effect. In 2014, the coral community was similar to that existing before the bleaching. According to descriptors and metrics adopted, recovery of Maldivian coral reefs took between 6 and 15years, or may even be considered unachieved, as there are species that had not come back yet. Copyright © 2015 Elsevier Ltd. All rights reserved.

  4. Coral community response to bleaching on a highly disturbed reef

    Science.gov (United States)

    Guest, J. R.; Low, J.; Tun, K.; Wilson, B.; Ng, C.; Raingeard, D.; Ulstrup, K. E.; Tanzil, J. T. I.; Todd, P. A.; Toh, T. C.; McDougald, D.; Chou, L. M.; Steinberg, P. D.

    2016-02-01

    While many studies of coral bleaching report on broad, regional scale responses, fewer examine variation in susceptibility among coral taxa and changes in community structure, before, during and after bleaching on individual reefs. Here we report in detail on the response to bleaching by a coral community on a highly disturbed reef site south of mainland Singapore before, during and after a major thermal anomaly in 2010. To estimate the capacity for resistance to thermal stress, we report on: a) overall bleaching severity during and after the event, b) differences in bleaching susceptibility among taxa during the event, and c) changes in coral community structure one year before and after bleaching. Approximately two thirds of colonies bleached, however, post-bleaching recovery was quite rapid and, importantly, coral taxa that are usually highly susceptible were relatively unaffected. Although total coral cover declined, there was no significant change in coral taxonomic community structure before and after bleaching. Several factors may have contributed to the overall high resistance of corals at this site including Symbiodinium affiliation, turbidity and heterotrophy. Our results suggest that, despite experiencing chronic anthropogenic disturbances, turbid shallow reef communities may be remarkably resilient to acute thermal stress.

  5. Coral community response to bleaching on a highly disturbed reef.

    Science.gov (United States)

    Guest, J R; Low, J; Tun, K; Wilson, B; Ng, C; Raingeard, D; Ulstrup, K E; Tanzil, J T I; Todd, P A; Toh, T C; McDougald, D; Chou, L M; Steinberg, P D

    2016-02-15

    While many studies of coral bleaching report on broad, regional scale responses, fewer examine variation in susceptibility among coral taxa and changes in community structure, before, during and after bleaching on individual reefs. Here we report in detail on the response to bleaching by a coral community on a highly disturbed reef site south of mainland Singapore before, during and after a major thermal anomaly in 2010. To estimate the capacity for resistance to thermal stress, we report on: a) overall bleaching severity during and after the event, b) differences in bleaching susceptibility among taxa during the event, and c) changes in coral community structure one year before and after bleaching. Approximately two thirds of colonies bleached, however, post-bleaching recovery was quite rapid and, importantly, coral taxa that are usually highly susceptible were relatively unaffected. Although total coral cover declined, there was no significant change in coral taxonomic community structure before and after bleaching. Several factors may have contributed to the overall high resistance of corals at this site including Symbiodinium affiliation, turbidity and heterotrophy. Our results suggest that, despite experiencing chronic anthropogenic disturbances, turbid shallow reef communities may be remarkably resilient to acute thermal stress.

  6. Environmental symbiont acquisition may not be the solution to warming seas for reef-building corals.

    Directory of Open Access Journals (Sweden)

    Mary Alice Coffroth

    Full Text Available BACKGROUND: Coral reefs worldwide are in decline. Much of the mortality can be attributed to coral bleaching (loss of the coral's intracellular photosynthetic algal symbiont associated with global warming. How corals will respond to increasing oceanic temperatures has been an area of extensive study and debate. Recovery after a bleaching event is dependent on regaining symbionts, but the source of repopulating symbionts is poorly understood. Possibilities include recovery from the proliferation of endogenous symbionts or recovery by uptake of exogenous stress-tolerant symbionts. METHODOLOGY/PRINCIPAL FINDINGS: To test one of these possibilities, the ability of corals to acquire exogenous symbionts, bleached colonies of Porites divaricata were exposed to symbiont types not normally found within this coral and symbiont acquisition was monitored. After three weeks exposure to exogenous symbionts, these novel symbionts were detected in some of the recovering corals, providing the first experimental evidence that scleractinian corals are capable of temporarily acquiring symbionts from the water column after bleaching. However, the acquisition was transient, indicating that the new symbioses were unstable. Only those symbiont types present before bleaching were stable upon recovery, demonstrating that recovery was from the resident in situ symbiont populations. CONCLUSIONS/SIGNIFICANCE: These findings suggest that some corals do not have the ability to adjust to climate warming by acquiring and maintaining exogenous, more stress-tolerant symbionts. This has serious ramifications for the success of coral reefs and surrounding ecosystems and suggests that unless actions are taken to reverse it, climate change will lead to decreases in biodiversity and a loss of coral reefs.

  7. Coral communities of the remote atoll reefs in the Nansha Islands, southern South China Sea.

    Science.gov (United States)

    Zhao, M X; Yu, K F; Shi, Q; Chen, T R; Zhang, H L; Chen, T G

    2013-09-01

    During the months of May and June in the year 2007, a survey was conducted regarding coral reef communities in the remote atolls (Zhubi Reef and Meiji Reef) of Nansha Islands, southern South China Sea. The goals of the survey were to: (1) for the first time, compile a scleractinian coral check-list; (2) estimate the total richness, coral cover, and growth forms of the community; and (3) describe preliminary patterns of community structure according to geomorphological units. Findings of this survey revealed a total of 120 species of scleractinia belonging to 40 genera, while the average coral cover was 21 %, ranging from less than 10 % to higher than 50 %. Branching and massive corals were also found to be the most important growth forms of the whole coral community, while Acropora, Montipora, and Porites were the three dominant genera in the overall region, with their contributions to total coral cover measuring 21, 22, and 23 %, respectively. Overall, coral communities of the Nansha Islands were in a relative healthy condition with high species diversity and coral cover. Spatial pattern of coral communities existed among various geomorphological units. Mean coral cover was highest in the patch reef within the lagoon, followed by the fore reef slope, reef flat, and lagoon slope. The greatest contributors to total coral cover were branching Acropora (45 %) in the lagoon slope, branching Montipora (44 %) in the reef flat, and massive Porites (51 %) in the patch reef. Coral cover in the fore reef revealed a greater range of genera than in other habitats. The leeward fore reef slope had higher coral cover (> 50 %) when compared with the windward slope (coral communities of the inner reef flat were characterized by higher coral cover (27 %) and dominant branching Montipora corals, while lower coral cover (4 %) was dominated by Psammocora with massive growth forms on the outer reef flat. Destructive fishing and coral bleaching were two major threats to coral communities

  8. Guam Long-term Coral Reef Monitoring Program Coral Colony Size and Condition Surveys since 2010

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Government of Guam's Long-term Coral Reef Monitoring Program, coordinated by the Guam Coastal Management Program until October 2013 and now coordinated by the...

  9. NOAA's Coral Reef Conservation Program: 2016 Projects Monitoring the Effects of Thermal Stress on Coral Bleaching

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Climate change impacts have been identified as one of the greatest global threats to coral reef ecosystems. As temperature rise, mass bleaching, and infectious...

  10. Are non-estuarine mangroves connected to coral reefs through fish migration? : A mini-review

    NARCIS (Netherlands)

    Nagelkerken, I.

    2007-01-01

    Mangroves are an important fish habitat, but little is known of their nursery function and connectivity to other habitats such as coral reefs. Here, the present status of knowledge on connectivity between non-estuarine mangroves and coral reefs by postlarval coral reef fishes is reviewed. Only since

  11. 77 FR 6786 - U.S. Coral Reef Task Force Public Meeting and Public Comment

    Science.gov (United States)

    2012-02-09

    ... National Oceanic and Atmospheric Administration U.S. Coral Reef Task Force Public Meeting and Public..., Notice of public comment. SUMMARY: Notice is hereby given of a public meeting of the U.S. Coral Reef Task.... Coral Reef Task Force, provides a forum for coordinated planning and action among federal agencies...

  12. 76 FR 24050 - Coral Reef Restoration Plan, Final Programmatic Environmental Impact Statement, Biscayne National...

    Science.gov (United States)

    2011-04-29

    ... National Park Service Coral Reef Restoration Plan, Final Programmatic Environmental Impact Statement... Final Programmatic Environmental Impact Statement for the Coral Reef Restoration Plan, Biscayne National... Impact Statement for the Coral Reef Restoration Plan (Plan/FEIS) for Biscayne National Park, Florida. The...

  13. 75 FR 21650 - Coral Reef Restoration Plan, Draft Programmatic Environmental Impact Statement, Biscayne National...

    Science.gov (United States)

    2010-04-26

    ... National Park Service Coral Reef Restoration Plan, Draft Programmatic Environmental Impact Statement... Availability of the Draft Programmatic Environmental Impact Statement for the Coral Reef Restoration Plan... Environmental Impact Statement (DEIS) for the Coral Reef Restoration Plan for Biscayne National Park, Florida...

  14. 76 FR 7579 - U.S. Coral Reef Task Force Public Meeting and Public Comment

    Science.gov (United States)

    2011-02-10

    ... Fish and Wildlife Service U.S. Coral Reef Task Force Public Meeting and Public Comment AGENCY: Fish and... U.S. Fish and Wildlife Service (Service), announce a public business meeting of the U.S. Coral Reef...-mail: Andrew_Gude@fws.gov ); or Liza Johnson, U.S. Coral Reef Task Force Department of the Interior...

  15. 77 FR 39724 - U.S. Coral Reef Task Force Public Meeting and Public Comment

    Science.gov (United States)

    2012-07-05

    ...-123D0102DM-DS61200000] U.S. Coral Reef Task Force Public Meeting and Public Comment AGENCY: Fish and Wildlife.... Fish and Wildlife Service (Service), announce a public meeting of the U.S. Coral Reef Task Force... better preserve and protect coral reef ecosystems. The Departments of Commerce and the Interior co-chair...

  16. 76 FR 77779 - Availability of Seats for the Northwestern Hawaiian Islands Coral Reef Ecosystem Reserve Advisory...

    Science.gov (United States)

    2011-12-14

    ... Coral Reef Ecosystem Reserve Advisory Council AGENCY: Office of National Marine Sanctuaries (ONMS... the following vacant seats on the Northwestern Hawaiian Islands Coral Reef Ecosystem Reserve Advisory....byers@noaa.gov . SUPPLEMENTARY INFORMATION: The NWHI Coral Reef Ecosystem Reserve is a ] marine...

  17. 78 FR 49258 - Fisheries in the Western Pacific; Special Coral Reef Ecosystem Fishing Permit

    Science.gov (United States)

    2013-08-13

    ... Coral Reef Ecosystem Fishing Permit AGENCY: National Marine Fisheries Service (NMFS), National Oceanic... assessment; request for comments. SUMMARY: NMFS proposes to issue a Special Coral Reef Ecosystem Fishing Permit that would authorize Kampachi Farms, LLC, to culture and harvest a coral reef ecosystem management...

  18. 76 FR 52318 - U.S. Coral Reef Task Force Public Meeting and Public Comment

    Science.gov (United States)

    2011-08-22

    ... National Oceanic and Atmospheric Administration U.S. Coral Reef Task Force Public Meeting and Public..., Notice of public comment. SUMMARY: Notice is hereby given of a public meeting of the U.S. Coral Reef Task... the U.S. Coral Reef Task Force, provides a forum for coordinated planning and action among federal...

  19. 77 FR 16211 - Availability of Seats for the Northwestern Hawaiian Islands Coral Reef Ecosystem Reserve Advisory...

    Science.gov (United States)

    2012-03-20

    ... Coral Reef Ecosystem Reserve Advisory Council AGENCY: Office of National Marine Sanctuaries (ONMS... the following vacant seats on the Northwestern Hawaiian Islands Coral Reef Ecosystem Reserve Advisory... . SUPPLEMENTARY INFORMATION: The NWHI Coral Reef Ecosystem Reserve is a marine protected area designed to conserve...

  20. 77 FR 48504 - Proposed Information Collection; Comment Request; Economic Value of Puerto Rico's Coral Reef...

    Science.gov (United States)

    2012-08-14

    ... Value of Puerto Rico's Coral Reef Ecosystems for Recreation-Tourism AGENCY: National Oceanic and... values of Puerto Rico's coral reef ecosystems. Estimates will be made for all ecosystem services for the Guanica Bay Watershed and for recreation-tourism for all of Puerto Rico's coral reef ecosystems. The...

  1. 78 FR 66683 - Fisheries in the Western Pacific; Special Coral Reef Ecosystem Fishing Permit

    Science.gov (United States)

    2013-11-06

    ... Coral Reef Ecosystem Fishing Permit AGENCY: National Marine Fisheries Service (NMFS), National Oceanic... assessment and finding of no significant impact for the issuance of a special coral reef ecosystem fishing permit. SUMMARY: NMFS issued a Special Coral Reef Ecosystem Fishing Permit that authorizes Kampachi Farms...

  2. Assessing the sensitivity of coral reef condition indicators to local and global stressors with Bayesian networks

    Science.gov (United States)

    Coral reefs are highly valued ecosystems that are currently imperiled. Although the value of coral reefs to human societies is only just being investigated and better understood, for many local and global economies coral reefs are important providers of ecosystem services that su...

  3. 75 FR 47624 - U.S. Coral Reef Task Force Public Meeting and Public Comment

    Science.gov (United States)

    2010-08-06

    ... Fish and Wildlife Service U.S. Coral Reef Task Force Public Meeting and Public Comment AGENCY: Fish and... U.S. Fish and Wildlife Service (Service), announce a public meeting of the U.S. Coral Reef Task...: Andrew_Gude@fws.gov ); or Liza Johnson, U.S. Coral Reef Task Force Department of the Interior Liaison, U...

  4. Are non-estuarine mangroves connected to coral reefs through fish migration? : A mini-review

    NARCIS (Netherlands)

    Nagelkerken, I.

    2007-01-01

    Mangroves are an important fish habitat, but little is known of their nursery function and connectivity to other habitats such as coral reefs. Here, the present status of knowledge on connectivity between non-estuarine mangroves and coral reefs by postlarval coral reef fishes is reviewed. Only since

  5. Assessing the sensitivity of coral reef condition indicators to local and global stressors with Bayesian networks

    Science.gov (United States)

    Coral reefs are highly valued ecosystems that are currently imperiled. Although the value of coral reefs to human societies is only just being investigated and better understood, for many local and global economies coral reefs are important providers of ecosystem services that su...

  6. Experimental Bleaching of a Reef-Building Coral Using a Simplified Recirculating Laboratory Exposure System

    Science.gov (United States)

    Determining stressor-response relationships in reef building corals is a critical need for researchers because of global declines in coral reef ecosystems. A simplified recirculating coral exposure system for laboratory testing of a diversity of species and morphologies of reef b...

  7. Experimental Bleaching of a Reef-Building Coral Using a Simplified Recirculating Laboratory Exposure System

    Science.gov (United States)

    Determining stressor-response relationships in reef building corals is a critical need for researchers because of global declines in coral reef ecosystems. A simplified recirculating coral exposure system for laboratory testing of a diversity of species and morphologies of reef b...

  8. Changes in biodiversity and functioning of reef fish assemblages following coral bleaching and coral loss

    KAUST Repository

    Pratchett, M.S.

    2011-08-12

    Coral reef ecosystems are increasingly subject to severe, large-scale disturbances caused by climate change (e.g., coral bleaching) and other more direct anthropogenic impacts. Many of these disturbances cause coral loss and corresponding changes in habitat structure, which has further important effects on abundance and diversity of coral reef fishes. Declines in the abundance and diversity of coral reef fishes are of considerable concern, given the potential loss of ecosystem function. This study explored the effects of coral loss, recorded in studies conducted throughout the world, on the diversity of fishes and also on individual responses of fishes within different functional groups. Extensive (>60%) coral loss almost invariably led to declines in fish diversity. Moreover, most fishes declined in abundance following acute disturbances that caused >10% declines in local coral cover. Response diversity, which is considered critical in maintaining ecosystem function and promoting resilience, was very low for corallivores, but was much higher for herbivores, omnivores and carnivores. Sustained and ongoing climate change thus poses a significant threat to coral reef ecosystems and diversity hotspots are no less susceptible to projected changes in diversity and function.

  9. Changes in Biodiversity and Functioning of Reef Fish Assemblages following Coral Bleaching and Coral Loss

    Directory of Open Access Journals (Sweden)

    Nicholas A.J. Graham

    2011-08-01

    Full Text Available Coral reef ecosystems are increasingly subject to severe, large-scale disturbances caused by climate change (e.g., coral bleaching and other more direct anthropogenic impacts. Many of these disturbances cause coral loss and corresponding changes in habitat structure, which has further important effects on abundance and diversity of coral reef fishes. Declines in the abundance and diversity of coral reef fishes are of considerable concern, given the potential loss of ecosystem function. This study explored the effects of coral loss, recorded in studies conducted throughout the world, on the diversity of fishes and also on individual responses of fishes within different functional groups. Extensive (>60% coral loss almost invariably led to declines in fish diversity. Moreover, most fishes declined in abundance following acute disturbances that caused >10% declines in local coral cover. Response diversity, which is considered critical in maintaining ecosystem function and promoting resilience, was very low for corallivores, but was much higher for herbivores, omnivores and carnivores. Sustained and ongoing climate change thus poses a significant threat to coral reef ecosystems and diversity hotspots are no less susceptible to projected changes in diversity and function.

  10. Thresholds and the resilience of Caribbean coral reefs.

    Science.gov (United States)

    Mumby, Peter J; Hastings, Alan; Edwards, Helen J

    2007-11-01

    The deteriorating health of the world's coral reefs threatens global biodiversity, ecosystem function, and the livelihoods of millions of people living in tropical coastal regions. Reefs in the Caribbean are among the most heavily affected, having experienced mass disease-induced mortality of the herbivorous urchin Diadema antillarum in 1983 and two framework-building species of coral. Declining reef health is characterized by increases in macroalgae. A critical question is whether the observed macroalgal bloom on Caribbean reefs is easily reversible. To answer this question, we must resolve whether algal-dominated reefs are an alternative stable state of the ecosystem or simply the readily reversible result of a phase change along a gradient of some environmental or ecological parameter. Here, using a fully parameterized simulation model in combination with a simple analytical model, we show that Caribbean reefs became susceptible to alternative stable states once the urchin mortality event of 1983 confined the majority of grazing to parrotfishes. We reveal dramatic hysteresis in a natural system and define critical thresholds of grazing and coral cover beyond which resilience is lost. Most grazing thresholds lie near the upper level observed for parrotfishes in nature, suggesting that reefs are highly sensitive to parrotfish exploitation. Ecosystem thresholds can be combined with stochastic models of disturbance to identify targets for the restoration of ecosystem processes. We illustrate this principle by estimating the relationship between current reef state (coral cover and grazing) and the probability that the reef will withstand moderate hurricane intensity for two decades without becoming entrained in a shift towards a stable macroalgal-dominated state. Such targets may help reef managers face the challenge of addressing global disturbance at local scales.

  11. Biogeochemical responses following coral mass spawning on the Great Barrier Reef: pelagic-benthic coupling

    Science.gov (United States)

    Wild, C.; Jantzen, C.; Struck, U.; Hoegh-Guldberg, O.; Huettel, M.

    2008-03-01

    This study quantified how the pulse of organic matter from the release of coral gametes triggered a chain of pelagic and benthic processes during an annual mass spawning event on the Australian Great Barrier Reef. Particulate organic matter (POM) concentrations in reef waters increased by threefold to 11-fold the day after spawning and resulted in a stimulation of pelagic oxygen consumption rates that lasted for at least 1 week. Water column microbial communities degraded the organic carbon of gametes of the broadcast-spawning coral Acropora millepora at a rate of >15% h-1, which is about three times faster than the degradation rate measured for larvae of the brooding coral Stylophora pistillata. Stable isotope signatures of POM in the water column reflected the fast transfer of organic matter from coral gametes into higher levels of the food chain, and the amount of POM reaching the seafloor immediately increased after coral spawning and then tailed-off in the next 2 weeks. Short-lasting phytoplankton blooms developed within a few days after the spawning event, indicating a prompt recycling of nutrients released through the degradation of spawning products. These data show the profound effects of coral mass spawning on the reef community and demonstrate the tight recycling of nutrients in this oligotrophic ecosystem.

  12. Holocene key coral species in the Northwest Pacific: indicators of reef formation and reef ecosystem responses to global climate change and anthropogenic stresses in the near future

    Science.gov (United States)

    Hongo, Chuki

    2012-03-01

    The geological record of key coral species that contribute to reef formation and maintenance of reef ecosystems is important for understanding the ecosystem response to global-scale climate change and anthropogenic stresses in the near future. Future responses can be predicted from accumulated data on Holocene reef species identified in drillcore and from data on raised reef terraces. The present study analyzes a dataset based on 27 drillcores, raised reef terraces, and 134 radiocarbon and U-Th ages from reefs of the Northwest Pacific, with the aim of examining the role of key coral species in reef growth and maintenance for reef ecosystem during Holocene sea-level change. The results indicate a latitudinal change in key coral species: arborescent Acropora (Acropora intermedia and Acropora muricata) was the dominant reef builder at reef crests in the tropics, whereas Porites (Porites australiensis, Porites lutea, and Porites lobata) was the dominant contributor to reef growth in the subtropics between 10,000 and 7000 cal. years BP (when the rate of sea-level rise was 10 m/ka). Acropora digitifera, Acropora hyacinthus, Acropora robusta/A. abrotanoides, Isopora palifera, Favia stelligera, and Goniastrea retiformis from the corymbose and tabular Acropora facies were the main key coral species at reef crests between 7000 and 5000 cal. years BP (when the rate of sea-level rise was 5 m/ka) and during the following period of stable sea-level. Massive Porites (P. australiensis, P. lutea, and P. lobata) contributed to reef growth in shallow lagoons during the period of stable sea level. Key coral species from the corymbose and tabular Acropora facies have the potential to build reefs and maintain ecosystems in the near future under a global sea-level rise of 2-6 m/ka, as do key coral species from the arborescent Acropora facies and massive Porites facies, which show vigorous growth and are tolerant to relatively deep-water, low-energy environments. However, these species

  13. Challenges for Managing Fisheries on Diverse Coral Reefs

    Directory of Open Access Journals (Sweden)

    Douglas Fenner

    2012-03-01

    Full Text Available Widespread coral reef decline has included the decline of reef fish populations, and the subsistence and artisanal fisheries that depend on them. Overfishing and destructive fishing have been identified as the greatest local threats to coral reefs, but the greatest future threats are acidification and increases in mass coral bleaching caused by global warming. Some reefs have shifted from dominance by corals to macroalgae, in what are called “phase shifts”. Depletion of herbivores including fishes has been identified as a contributor to such phase shifts, though nutrients are also involved in complex interactions with herbivory and competition. The depletion of herbivorous fishes implies a reduction of the resilience of coral reefs to the looming threat of mass coral mortality from bleaching, since mass coral deaths are likely to be followed by mass macroalgal blooms on the newly exposed dead substrates. Conventional stock assessment of each fish species would be the preferred option for understanding the status of the reef fishes, but this is far too expensive to be practical because of the high diversity of the fishery and poverty where most reefs are located. In addition, stock assessment models and fisheries in general assume density dependent populations, but a key prediction that stocks recover from fishing is not always confirmed. Catch Per Unit Effort (CPUE has far too many weaknesses to be a useful method. The ratio of catch to stock and the proportion of catch that is mature depend on fish catch data, and are heavily biased toward stocks that are in good condition and incapable of finding species that are in the worst condition. Near-pristine reefs give us a reality check about just how much we have lost. Common fisheries management tools that control effort or catch are often prohibitively difficult to enforce for most coral reefs except in developed countries. Ecosystem-based management requires management of impacts of fishing

  14. Spectral Diversity and Regulation of Coral Fluorescence in a Mesophotic Reef Habitat in the Red Sea

    Science.gov (United States)

    Eyal, Gal; Wiedenmann, Jörg; Grinblat, Mila; D’Angelo, Cecilia; Kramarsky-Winter, Esti; Treibitz, Tali; Ben-Zvi, Or; Shaked, Yonathan; Smith, Tyler B.; Harii, Saki; Denis, Vianney; Noyes, Tim; Tamir, Raz; Loya, Yossi

    2015-01-01

    The phenomenon of coral fluorescence in mesophotic reefs, although well described for shallow waters, remains largely unstudied. We found that representatives of many scleractinian species are brightly fluorescent at depths of 50–60 m at the Interuniversity Institute for Marine Sciences (IUI) reef in Eilat, Israel. Some of these fluorescent species have distribution maxima at mesophotic depths (40–100 m). Several individuals from these depths displayed yellow or orange-red fluorescence, the latter being essentially absent in corals from the shallowest parts of this reef. We demonstrate experimentally that in some cases the production of fluorescent pigments is independent of the exposure to light; while in others, the fluorescence signature is altered or lost when the animals are kept in darkness. Furthermore, we show that green-to-red photoconversion of fluorescent pigments mediated by short-wavelength light can occur also at depths where ultraviolet wavelengths are absent from the underwater light field. Intraspecific colour polymorphisms regarding the colour of the tissue fluorescence, common among shallow water corals, were also observed for mesophotic species. Our results suggest that fluorescent pigments in mesophotic reefs fulfil a distinct biological function and offer promising application potential for coral-reef monitoring and biomedical imaging. PMID:26107282

  15. Flexibility in Algal Endosymbioses Shapes Growth in Reef Corals

    Science.gov (United States)

    Little, Angela F.; van Oppen, Madeleine J. H.; Willis, Bette L.

    2004-06-01

    The relation between corals and their algal endosymbionts has been a key to the success of scleractinian (stony) corals as modern reef-builders, but little is known about early stages in the establishment of the symbiosis. Here, we show that initial uptake of zooxanthellae by juvenile corals during natural infection is nonspecific (a potentially adaptive trait); the association is flexible and characterized by a change in (dominant) zooxanthella strains over time; and growth rates of experimentally infected coral holobionts are partly contingent on the zooxanthella strain harbored, with clade C-infected juveniles growing two to three times as fast as those infected with clade D.

  16. Coral Reefs and People in a High-CO2 World: Where Can Science Make a Difference to People?

    OpenAIRE

    Pendleton, Linwood; Comte, Adrien; Langdon, Chris; Ekstrom, Julia A.; Sarah R Cooley; Suatoni, Lisa; Beck, Michael W.; Brander, Luke M.; Burke, Lauretta; Cinner, Josh E.; Doherty, Carolyn; Edwards, Peter E.T.; Gledhill, Dwight; Jiang, Li-Qing; van Hooidonk, Ruben J.

    2016-01-01

    Reefs and People at Risk Increasing levels of carbon dioxide in the atmosphere put shallow, warm-water coral reef ecosystems, and the people who depend upon them at risk from two key global environmental stresses: 1) elevated sea surface temperature (that can cause coral bleaching and related mortality), and 2) ocean acidification. These global stressors: cannot be avoided by local management, compound local stressors, and hasten the loss of ecosystem services. Impacts to people will be most ...

  17. Understanding individual and combined effects of ocean acidification, warming and coastal runoff on marine calcifying organisms on tropical coral reefs

    OpenAIRE

    Vogel, Nikolas

    2015-01-01

    Anthropogenically induced greenhouse gas emissions result in two major environmental changes on the global scale for coral reefs: ocean acidification (OA) and ocean warming (OW). Additionally, increasing levels of terrestrial runoff, that introduce fertilizer, sewage, sediments and other contaminants into coastal areas, can decrease water quality on the local scale. Consequently, photosynthesizing and calcifying coral reef organisms are affected by OA, OW and coastal runoff, but knowledge abo...

  18. Technical Note: Artificial coral reef mesocosms for ocean acidification investigations

    Directory of Open Access Journals (Sweden)

    J. Leblud

    2014-11-01

    Full Text Available The design and evaluation of replicated artificial mesocosms are presented in the context of a thirteen month experiment on the effects of ocean acidification on tropical coral reefs. They are defined here as (semi-closed (i.e. with or without water change from the reef mesocosms in the laboratory with a more realistic physico-chemical environment than microcosms. Important physico-chemical parameters (i.e. pH, pO2, pCO2, total alkalinity, temperature, salinity, total alkaline earth metals and nutrients availability were successfully monitored and controlled. Daily variations of irradiance and pH were applied to approach field conditions. Results highlighted that it was possible to maintain realistic physico-chemical parameters, including daily changes, into artificial mesocosms. On the other hand, the two identical artificial mesocosms evolved differently in terms of global community oxygen budgets although the initial biological communities and physico-chemical parameters were comparable. Artificial reef mesocosms seem to leave enough degrees of freedom to the enclosed community of living organisms to organize and change along possibly diverging pathways.

  19. Climate-driven coral reorganisation influences aggressive behaviour in juvenile coral-reef fishes

    OpenAIRE

    Kok, Judith E.; Graham, Nicholas Anthony James; Mia O Hoogenboom

    2016-01-01

    Globally, habitat degradation is altering the abundance and diversity of species in a variety of ecosystems. This study aimed to determine how habitat degradation, in terms of changing coral composition under climate change, affected abundance, species richness and aggressive behaviour of juveniles of three damselfishes (Pomacentrus moluccensis, P. amboinensis and Dischistodus perspicillatus, in order of decreasing reliance on coral). Patch reefs were constructed to simulate two types of reef...

  20. Microbial to reef scale interactions between the reef-building coral Montastraea annularis and benthic algae

    NARCIS (Netherlands)

    Barott, K.L.; Rodriguez-Mueller, B; Youle, M.; Marhaver, K.L.; Vermeij, M.J.A.; Smith, J.E.; Rohwer, F.L.

    2012-01-01

    Competition between reef-building corals and benthic algae is of key importance for reef dynamics. These interactions occur on many spatial scales, ranging from chemical to regional. Using microprobes, 16S rDNA pyrosequencing and underwater surveys, we examined the interactions between the

  1. The coral reef of South Moloka'i, Hawai'i - Portrait of a sediment-threatened fringing reef

    Science.gov (United States)

    Field, Michael E.; Cochran, Susan A.; Logan, Joshua; Storlazzi, Curt D.

    2008-01-01

    Moloka‘i, with the most extensive coral reef in the main Hawaiian Islands, is especially sacred to Hina, the Goddess of the Moon. As Hinaalo, she is the Mother of the Hawaiian people; as Hinapuku‘a, she is the Goddess of Fishermen; and in the form Hina‘opuhalako‘a, she is the Goddess who gave birth to coral, coral reefs, and all spiny marine organisms. Interdependence between the reef’s living resources, the people, and their cosmology was the basis for management of Moloka‘i’s coastal waters for over a thousand years.The ancient residents of Moloka‘i built the greatest concentration of fishponds known anywhere, but their mastery of mariculture, something needed now more than ever, was lost after near genocide from exotic Western diseases. Subsequent destruction of the native vegetation for exotic cattle, goats, pigs, sugar cane, and pineapple caused soil erosion and sedimentation on the reef flat. This masterful volume clearly documents that soil washing into the sea is the major threat to the reef today. Abandoned fishponds, choked with sediment, now act as barriers and mud traps, making damage to corals less than it would otherwise would have been.The role of mud and freshwater from land in preventing coral reef growth, clearly articulated in Charles Darwin’s first book, The Structure and Distribution of Coral Reefs, is the major theme of this book. All around the tropics, coral reefs have died from huge increases in terrestrial sedimentation that resulted from destruction of hillside forests for cash-crop agriculture and pastures in the colonial era, especially in Latin America, Asia, and the islands of the Caribbean and Indo-Pacific. It is obvious that one cannot manage the coastal zone as a unit separate from the watersheds that drain into it. Yet there has been surprisingly little comprehensive scientific study of these impacts.In this landmark volume, U.S. Geological Survey researchers and their colleagues have developed and applied a

  2. Coral reef environmental science: truth versus the Cassandra syndrome

    Science.gov (United States)

    Grigg, Richard W.

    1992-12-01

    In 1970, coral reef science was warned that the crown-of-thorns starfish, Acanthaster planci, might cause the extinction of scleractinian corals in the Pacific Ocean. Now, 20 years later we can fortunately say that this alarm was almost certainly too severe. Many reefs were devastated by the starfish, but none are extinct, none have disappeared and many are in various stages of recovery. But now in the 1990's a new alarm is being sounded. This time the concern is over widespread destruction of coral reefs by elevated surface temperatures. Once again a few scientists have issued a dire warning that these events may represent a harbinger of ocean warming caused by the Greenhouse Effect. Has not Acanthaster taught coral reef science a lesson? The debate is far from over but this time the mood in general is not one of over-reaction. This time the Cassandras will be tested by the truth of careful experimentation, long-term monitoring and objective interpretation. Coral reef science appears to have come of age.

  3. Microbial to reef scale interactions between the reef-building coral Montastraea annularis and benthic algae.

    Science.gov (United States)

    Barott, Katie L; Rodriguez-Mueller, Beltran; Youle, Merry; Marhaver, Kristen L; Vermeij, Mark J A; Smith, Jennifer E; Rohwer, Forest L

    2012-04-22

    Competition between reef-building corals and benthic algae is of key importance for reef dynamics. These interactions occur on many spatial scales, ranging from chemical to regional. Using microprobes, 16S rDNA pyrosequencing and underwater surveys, we examined the interactions between the reef-building coral Montastraea annularis and four types of benthic algae. The macroalgae Dictyota bartayresiana and Halimeda opuntia, as well as a mixed consortium of turf algae, caused hypoxia on the adjacent coral tissue. Turf algae were also associated with major shifts in the bacterial communities at the interaction zones, including more pathogens and virulence genes. In contrast to turf algae, interactions with crustose coralline algae (CCA) and M. annularis did not appear to be antagonistic at any scale. These zones were not hypoxic, the microbes were not pathogen-like and the abundance of coral-CCA interactions was positively correlated with per cent coral cover. We propose a model in which fleshy algae (i.e. some species of turf and fleshy macroalgae) alter benthic competition dynamics by stimulating bacterial respiration and promoting invasion of virulent bacteria on corals. This gives fleshy algae a competitive advantage over corals when human activities, such as overfishing and eutrophication, remove controls on algal abundance. Together, these results demonstrate the intricate connections and mechanisms that structure coral reefs.

  4. Diversity and stability of herbivorous fishes on coral reefs.

    Science.gov (United States)

    Thibaut, Loic M; Connolly, Sean R; Sweatman, Hugh P A

    2012-04-01

    Biodiversity may provide insurance against ecosystem collapse by stabilizing assemblages that perform particular ecological functions (the "portfolio effect"). However, the extent to which this occurs in nature and the importance of different mechanisms that generate portfolio effects remain controversial. On coral reefs, herbivory helps maintain coral dominated states, so volatility in levels of herbivory has important implications for reef ecosystems. Here, we used an extensive time series of abundances on 35 reefs of the Great Barrier Reef of Australia to quantify the strength of the portfolio effect for herbivorous fishes. Then, we disentangled the contributions of two mechanisms that underlie it (compensatory interactions and differential responses to environmental fluctuations ["response diversity"]) by fitting a community-dynamic model that explicitly includes terms for both mechanisms. We found that portfolio effects operate strongly in herbivorous fishes, as shown by nearly independent fluctuations in abundances over time. Moreover, we found strong evidence for high response diversity, with nearly independent responses to environmental fluctuations. In contrast, we found little evidence that the portfolio effect in this system was enhanced by compensatory ecological interactions. Our results show that portfolio effects are driven principally by response diversity for herbivorous fishes on coral reefs. We conclude that portfolio effects can be very strong in nature and that, for coral reefs in particular, response diversity may help maintain herbivory above the threshold levels that trigger regime shifts.

  5. Near-surface enrichment of zooplankton over a shallow back reef: implications for coral reef food webs

    Science.gov (United States)

    Alldredge, A. L.; King, J. M.

    2009-12-01

    Zooplankton were 3-8 times more abundant during the day near the surface than elsewhere in the water column over a 1-2.4 m deep back reef in Moorea, French Polynesia. Zooplankton were also significantly more abundant near the surface at night although gradients were most pronounced under moonlight. Zooplankton in a unidirectional current became concentrated near the surface within 2 m of departing a well-mixed trough immediately behind the reef crest, indicating that upward swimming behavior, rather than near-bottom depletion by reef planktivores, was the proximal cause of these gradients. Zooplankton were highly enriched near the surface before and after a full lunar eclipse but distributed evenly throughout the water column during the eclipse itself supporting light as a proximal cue for the upward swimming behavior of many taxa. This is the first investigation of the vertical distribution of zooplankton over a shallow back reef typical of island barrier reef systems common around the world. Previous studies on deeper fringing reefs found zooplankton depletion near the bottom but no enrichment aloft. In Moorea, where seawater is continuously recirculated out the lagoon and back across the reef crest onto the back reef, selection for upward swimming behavior may be especially strong, because the surface serves both as a refuge from predation and an optimum location for retention within the reef system. Planktivorous fish and corals that can forage or grow even marginally higher in the water column might have a substantial competitive advantage over those nearer the bottom on shallow reefs. Zooplankton abundance varied more over a few tens of centimeters vertical distance than it did between seasons or even between day and night indicating that great care must be taken to accurately assess the availability of zooplankton as food on shallow reefs.

  6. Macroalgae in the coral reefs of Eilat (Gulf of Aqaba, Red Sea) as a possible indicator of reef degradation.

    Science.gov (United States)

    Bahartan, Karnit; Zibdah, Mohammad; Ahmed, Yousef; Israel, Alvaro; Brickner, Itzchak; Abelson, Avigdor

    2010-05-01

    The current state of health of the coral reefs in the northern Gulf of Aqaba (Red Sea), notably the Eilat reefs, is under debate regarding both their exact condition and the causes of degradation. A dearth of earlier data and unequivocal reliable indices are the major problems hinder a clear understanding of the reef state. Our research objective was to examine coral-algal dynamics as a potential cause and an indication of reef degradation. The community structure of stony corals and algae along the northern Gulf of Aqaba reveal non-seasonal turf algae dominancy in the shallow Eilat reefs (up to 72%), while the proximate Aqaba reefs present negligible turf cover (reefs, based on the reduction in essential reef components followed by proliferation of perennial turf algae. Our findings provide further evidence for the severe state of the Eilat coral reefs.

  7. Florida Integrated Science Center (FISC) Coral Reef Research

    Science.gov (United States)

    Poore, D.Z.

    2008-01-01

    Coral reefs provide important ecosystem services such as shoreline protection and the support of lucrative industries including fisheries and tourism. Such ecosystem services are being compromised as reefs decline due to coral disease, climate change, overfishing, and pollution. There is a need for focused, integrated science to understand the complex ecological interactions and effects of these many stressors and to provide information that will effectively guide policies and best management practices to preserve and restore these important resources. The U.S. Geological Survey Florida Integrated Science Center (USGS-FISC) is conducting a coordinated Coral Reef Research Project beginning in 2009. Specific research topics are aimed at addressing