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Sample records for colony clustering algorithm

  1. Improved Ant Colony Clustering Algorithm and Its Performance Study

    Science.gov (United States)

    Gao, Wei

    2016-01-01

    Clustering analysis is used in many disciplines and applications; it is an important tool that descriptively identifies homogeneous groups of objects based on attribute values. The ant colony clustering algorithm is a swarm-intelligent method used for clustering problems that is inspired by the behavior of ant colonies that cluster their corpses and sort their larvae. A new abstraction ant colony clustering algorithm using a data combination mechanism is proposed to improve the computational efficiency and accuracy of the ant colony clustering algorithm. The abstraction ant colony clustering algorithm is used to cluster benchmark problems, and its performance is compared with the ant colony clustering algorithm and other methods used in existing literature. Based on similar computational difficulties and complexities, the results show that the abstraction ant colony clustering algorithm produces results that are not only more accurate but also more efficiently determined than the ant colony clustering algorithm and the other methods. Thus, the abstraction ant colony clustering algorithm can be used for efficient multivariate data clustering. PMID:26839533

  2. Improved Ant Colony Clustering Algorithm and Its Performance Study

    Directory of Open Access Journals (Sweden)

    Wei Gao

    2016-01-01

    Full Text Available Clustering analysis is used in many disciplines and applications; it is an important tool that descriptively identifies homogeneous groups of objects based on attribute values. The ant colony clustering algorithm is a swarm-intelligent method used for clustering problems that is inspired by the behavior of ant colonies that cluster their corpses and sort their larvae. A new abstraction ant colony clustering algorithm using a data combination mechanism is proposed to improve the computational efficiency and accuracy of the ant colony clustering algorithm. The abstraction ant colony clustering algorithm is used to cluster benchmark problems, and its performance is compared with the ant colony clustering algorithm and other methods used in existing literature. Based on similar computational difficulties and complexities, the results show that the abstraction ant colony clustering algorithm produces results that are not only more accurate but also more efficiently determined than the ant colony clustering algorithm and the other methods. Thus, the abstraction ant colony clustering algorithm can be used for efficient multivariate data clustering.

  3. Core Business Selection Based on Ant Colony Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    Yu Lan

    2014-01-01

    Full Text Available Core business is the most important business to the enterprise in diversified business. In this paper, we first introduce the definition and characteristics of the core business and then descript the ant colony clustering algorithm. In order to test the effectiveness of the proposed method, Tianjin Port Logistics Development Co., Ltd. is selected as the research object. Based on the current situation of the development of the company, the core business of the company can be acquired by ant colony clustering algorithm. Thus, the results indicate that the proposed method is an effective way to determine the core business for company.

  4. Artificial Bee Colony Algorithm Based on K-Means Clustering for Multiobjective Optimal Power Flow Problem

    Directory of Open Access Journals (Sweden)

    Liling Sun

    2015-01-01

    Full Text Available An improved multiobjective ABC algorithm based on K-means clustering, called CMOABC, is proposed. To fasten the convergence rate of the canonical MOABC, the way of information communication in the employed bees’ phase is modified. For keeping the population diversity, the multiswarm technology based on K-means clustering is employed to decompose the population into many clusters. Due to each subcomponent evolving separately, after every specific iteration, the population will be reclustered to facilitate information exchange among different clusters. Application of the new CMOABC on several multiobjective benchmark functions shows a marked improvement in performance over the fast nondominated sorting genetic algorithm (NSGA-II, the multiobjective particle swarm optimizer (MOPSO, and the multiobjective ABC (MOABC. Finally, the CMOABC is applied to solve the real-world optimal power flow (OPF problem that considers the cost, loss, and emission impacts as the objective functions. The 30-bus IEEE test system is presented to illustrate the application of the proposed algorithm. The simulation results demonstrate that, compared to NSGA-II, MOPSO, and MOABC, the proposed CMOABC is superior for solving OPF problem, in terms of optimization accuracy.

  5. Partitional clustering algorithms

    CERN Document Server

    2015-01-01

    This book summarizes the state-of-the-art in partitional clustering. Clustering, the unsupervised classification of patterns into groups, is one of the most important tasks in exploratory data analysis. Primary goals of clustering include gaining insight into, classifying, and compressing data. Clustering has a long and rich history that spans a variety of scientific disciplines including anthropology, biology, medicine, psychology, statistics, mathematics, engineering, and computer science. As a result, numerous clustering algorithms have been proposed since the early 1950s. Among these algorithms, partitional (nonhierarchical) ones have found many applications, especially in engineering and computer science. This book provides coverage of consensus clustering, constrained clustering, large scale and/or high dimensional clustering, cluster validity, cluster visualization, and applications of clustering. Examines clustering as it applies to large and/or high-dimensional data sets commonly encountered in reali...

  6. Optimal Grid Scheduling Using Improved Artificial Bee Colony Algorithm

    OpenAIRE

    T. Vigneswari; M. A. Maluk Mohamed

    2015-01-01

    Job Scheduling plays an important role for efficient utilization of grid resources available across different domains and geographical zones. Scheduling of jobs is challenging and NPcomplete. Evolutionary / Swarm Intelligence algorithms have been extensively used to address the NP problem in grid scheduling. Artificial Bee Colony (ABC) has been proposed for optimization problems based on foraging behaviour of bees. This work proposes a modified ABC algorithm, Cluster Hete...

  7. A cluster algorithm for graphs

    NARCIS (Netherlands)

    S. van Dongen

    2000-01-01

    textabstractA cluster algorithm for graphs called the emph{Markov Cluster algorithm (MCL~algorithm) is introduced. The algorithm provides basically an interface to an algebraic process defined on stochastic matrices, called the MCL~process. The graphs may be both weighted (with nonnegative weight)

  8. Fuzzy Rules for Ant Based Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    Amira Hamdi

    2016-01-01

    Full Text Available This paper provides a new intelligent technique for semisupervised data clustering problem that combines the Ant System (AS algorithm with the fuzzy c-means (FCM clustering algorithm. Our proposed approach, called F-ASClass algorithm, is a distributed algorithm inspired by foraging behavior observed in ant colonyT. The ability of ants to find the shortest path forms the basis of our proposed approach. In the first step, several colonies of cooperating entities, called artificial ants, are used to find shortest paths in a complete graph that we called graph-data. The number of colonies used in F-ASClass is equal to the number of clusters in dataset. Hence, the partition matrix of dataset founded by artificial ants is given in the second step, to the fuzzy c-means technique in order to assign unclassified objects generated in the first step. The proposed approach is tested on artificial and real datasets, and its performance is compared with those of K-means, K-medoid, and FCM algorithms. Experimental section shows that F-ASClass performs better according to the error rate classification, accuracy, and separation index.

  9. Recovery Rate of Clustering Algorithms

    NARCIS (Netherlands)

    Li, Fajie; Klette, Reinhard; Wada, T; Huang, F; Lin, S

    2009-01-01

    This article provides a simple and general way for defining the recovery rate of clustering algorithms using a given family of old clusters for evaluating the performance of the algorithm when calculating a family of new clusters. Under the assumption of dealing with simulated data (i.e., known old

  10. Scalable Clustering of High-Dimensional Data Technique Using SPCM with Ant Colony Optimization Intelligence

    Directory of Open Access Journals (Sweden)

    Thenmozhi Srinivasan

    2015-01-01

    Full Text Available Clusters of high-dimensional data techniques are emerging, according to data noisy and poor quality challenges. This paper has been developed to cluster data using high-dimensional similarity based PCM (SPCM, with ant colony optimization intelligence which is effective in clustering nonspatial data without getting knowledge about cluster number from the user. The PCM becomes similarity based by using mountain method with it. Though this is efficient clustering, it is checked for optimization using ant colony algorithm with swarm intelligence. Thus the scalable clustering technique is obtained and the evaluation results are checked with synthetic datasets.

  11. Loading pattern optimization using ant colony algorithm

    International Nuclear Information System (INIS)

    Hoareau, Fabrice

    2008-01-01

    Electricite de France (EDF) operates 58 nuclear power plants (NPP), of the Pressurized Water Reactor type. The loading pattern optimization of these NPP is currently done by EDF expert engineers. Within this framework, EDF R and D has developed automatic optimization tools that assist the experts. LOOP is an industrial tool, developed by EDF R and D and based on a simulated annealing algorithm. In order to improve the results of such automatic tools, new optimization methods have to be tested. Ant Colony Optimization (ACO) algorithms are recent methods that have given very good results on combinatorial optimization problems. In order to evaluate the performance of such methods on loading pattern optimization, direct comparisons between LOOP and a mock-up based on the Max-Min Ant System algorithm (a particular variant of ACO algorithms) were made on realistic test-cases. It is shown that the results obtained by the ACO mock-up are very similar to those of LOOP. Future research will consist in improving these encouraging results by using parallelization and by hybridizing the ACO algorithm with local search procedures. (author)

  12. An Improved Ant Colony Routing Algorithm for WSNs

    Directory of Open Access Journals (Sweden)

    Tan Zhi

    2015-01-01

    Full Text Available Ant colony algorithm is a classical routing algorithm. And it are used in a variety of application because it is economic and self-organized. However, the routing algorithm will expend huge amounts of energy at the beginning. In the paper, based on the idea of Dijkstra algorithm, the improved ant colony algorithm was proposed to balance the energy consumption of networks. Through simulation and comparison with basic ant colony algorithms, it is obvious that improved algorithm can effectively balance energy consumption and extend the lifetime of WSNs.

  13. Warehouse stocking optimization based on dynamic ant colony genetic algorithm

    Science.gov (United States)

    Xiao, Xiaoxu

    2018-04-01

    In view of the various orders of FAW (First Automotive Works) International Logistics Co., Ltd., the SLP method is used to optimize the layout of the warehousing units in the enterprise, thus the warehouse logistics is optimized and the external processing speed of the order is improved. In addition, the relevant intelligent algorithms for optimizing the stocking route problem are analyzed. The ant colony algorithm and genetic algorithm which have good applicability are emphatically studied. The parameters of ant colony algorithm are optimized by genetic algorithm, which improves the performance of ant colony algorithm. A typical path optimization problem model is taken as an example to prove the effectiveness of parameter optimization.

  14. Cluster Synchronization Algorithms

    NARCIS (Netherlands)

    Xia, Weiguo; Cao, Ming

    2010-01-01

    This paper presents two approaches to achieving cluster synchronization in dynamical multi-agent systems. In contrast to the widely studied synchronization behavior, where all the coupled agents converge to the same value asymptotically, in the cluster synchronization problem studied in this paper,

  15. Transition Matrix Cluster Algorithms

    OpenAIRE

    Yevick, David; Lee, Yong Hwan

    2018-01-01

    We demonstrate that a series of simple procedures for increasing the efficiency of transition matrix calculations can be realized by integrating the standard single-spin reversal transition matrix method with global cluster inversion techniques.

  16. Applying Data Clustering Feature to Speed Up Ant Colony Optimization

    Directory of Open Access Journals (Sweden)

    Chao-Yang Pang

    2014-01-01

    Full Text Available Ant colony optimization (ACO is often used to solve optimization problems, such as traveling salesman problem (TSP. When it is applied to TSP, its runtime is proportional to the squared size of problem N so as to look less efficient. The following statistical feature is observed during the authors’ long-term gene data analysis using ACO: when the data size N becomes big, local clustering appears frequently. That is, some data cluster tightly in a small area and form a class, and the correlation between different classes is weak. And this feature makes the idea of divide and rule feasible for the estimate of solution of TSP. In this paper an improved ACO algorithm is presented, which firstly divided all data into local clusters and calculated small TSP routes and then assembled a big TSP route with them. Simulation shows that the presented method improves the running speed of ACO by 200 factors under the condition that data set holds feature of local clustering.

  17. Extended Fuzzy Clustering Algorithms

    NARCIS (Netherlands)

    U. Kaymak (Uzay); M. Setnes

    2000-01-01

    textabstractFuzzy clustering is a widely applied method for obtaining fuzzy models from data. It has been applied successfully in various fields including finance and marketing. Despite the successful applications, there are a number of issues that must be dealt with in practical applications of

  18. Artificial bee colony algorithm with dynamic multi-population

    Science.gov (United States)

    Zhang, Ming; Ji, Zhicheng; Wang, Yan

    2017-07-01

    To improve the convergence rate and make a balance between the global search and local turning abilities, this paper proposes a decentralized form of artificial bee colony (ABC) algorithm with dynamic multi-populations by means of fuzzy C-means (FCM) clustering. Each subpopulation periodically enlarges with the same size during the search process, and the overlapping individuals among different subareas work for delivering information acting as exploring the search space with diffusion of solutions. Moreover, a Gaussian-based search equation with redefined local attractor is proposed to further accelerate the diffusion of the best solution and guide the search towards potential areas. Experimental results on a set of benchmarks demonstrate the competitive performance of our proposed approach.

  19. K-means Clustering: Lloyd's algorithm

    Indian Academy of Sciences (India)

    First page Back Continue Last page Overview Graphics. K-means Clustering: Lloyd's algorithm. Refines clusters iteratively. Cluster points using Voronoi partitioning of the centers; Centroids of the clusters determine the new centers. Bad example k = 3, n =4.

  20. Normalization based K means Clustering Algorithm

    OpenAIRE

    Virmani, Deepali; Taneja, Shweta; Malhotra, Geetika

    2015-01-01

    K-means is an effective clustering technique used to separate similar data into groups based on initial centroids of clusters. In this paper, Normalization based K-means clustering algorithm(N-K means) is proposed. Proposed N-K means clustering algorithm applies normalization prior to clustering on the available data as well as the proposed approach calculates initial centroids based on weights. Experimental results prove the betterment of proposed N-K means clustering algorithm over existing...

  1. Parallel algorithms and cluster computing

    CERN Document Server

    Hoffmann, Karl Heinz

    2007-01-01

    This book presents major advances in high performance computing as well as major advances due to high performance computing. It contains a collection of papers in which results achieved in the collaboration of scientists from computer science, mathematics, physics, and mechanical engineering are presented. From the science problems to the mathematical algorithms and on to the effective implementation of these algorithms on massively parallel and cluster computers we present state-of-the-art methods and technology as well as exemplary results in these fields. This book shows that problems which seem superficially distinct become intimately connected on a computational level.

  2. Determination of atomic cluster structure with cluster fusion algorithm

    DEFF Research Database (Denmark)

    Obolensky, Oleg I.; Solov'yov, Ilia; Solov'yov, Andrey V.

    2005-01-01

    We report an efficient scheme of global optimization, called cluster fusion algorithm, which has proved its reliability and high efficiency in determination of the structure of various atomic clusters.......We report an efficient scheme of global optimization, called cluster fusion algorithm, which has proved its reliability and high efficiency in determination of the structure of various atomic clusters....

  3. A new cluster algorithm for graphs

    NARCIS (Netherlands)

    S. van Dongen

    1998-01-01

    textabstractA new cluster algorithm for graphs called the emph{Markov Cluster algorithm ($MCL$ algorithm) is introduced. The graphs may be both weighted (with nonnegative weight) and directed. Let~$G$~be such a graph. The $MCL$ algorithm simulates flow in $G$ by first identifying $G$ in a

  4. DIDS Using Cooperative Agents Based on Ant Colony Clustering

    Directory of Open Access Journals (Sweden)

    Muhammad Nur Kholish Abdurrazaq

    2015-07-01

    Full Text Available Intrusion detection systems (IDS play an important role in information security. Two major problems in the development of IDSs are the computational aspect and the architectural aspect. The computational or algorithmic problems include lacking ability of novel-attack detection and computation overload caused by large data traffic. The architectural problems are related to the communication between components of detection, including difficulties to overcome distributed and coordinated attacks because of the need of large amounts of distributed information and synchronization between detection components. This paper proposes a multi-agent architecture for a distributed intrusion detection system (DIDS based on ant-colony clustering (ACC, for recognizing new and coordinated attacks, handling large data traffic, synchronization, co-operation between components without the presence of centralized computation, and good detection performance in real-time with immediate alarm notification. Feature selection based on principal component analysis (PCA is used for dimensional reduction of NSL-KDD. Initial features are transformed to new features in smaller dimensions, where probing attacks (Ra-Probe have a characteristic sign in their average value that is different from that of normal activity. Selection is based on the characteristics of these factors, resulting in a two-dimensional subset of the 75% data reduction.

  5. A Simple and Efficient Artificial Bee Colony Algorithm

    Directory of Open Access Journals (Sweden)

    Yunfeng Xu

    2013-01-01

    Full Text Available Artificial bee colony (ABC is a new population-based stochastic algorithm which has shown good search abilities on many optimization problems. However, the original ABC shows slow convergence speed during the search process. In order to enhance the performance of ABC, this paper proposes a new artificial bee colony (NABC algorithm, which modifies the search pattern of both employed and onlooker bees. A solution pool is constructed by storing some best solutions of the current swarm. New candidate solutions are generated by searching the neighborhood of solutions randomly chosen from the solution pool. Experiments are conducted on a set of twelve benchmark functions. Simulation results show that our approach is significantly better or at least comparable to the original ABC and seven other stochastic algorithms.

  6. Ant colony search algorithm for optimal reactive power optimization

    Directory of Open Access Journals (Sweden)

    Lenin K.

    2006-01-01

    Full Text Available The paper presents an (ACSA Ant colony search Algorithm for Optimal Reactive Power Optimization and voltage control of power systems. ACSA is a new co-operative agents’ approach, which is inspired by the observation of the behavior of real ant colonies on the topic of ant trial formation and foraging methods. Hence, in the ACSA a set of co-operative agents called "Ants" co-operates to find good solution for Reactive Power Optimization problem. The ACSA is applied for optimal reactive power optimization is evaluated on standard IEEE, 30, 57, 191 (practical test bus system. The proposed approach is tested and compared to genetic algorithm (GA, Adaptive Genetic Algorithm (AGA.

  7. Frequent Pattern Mining Algorithms for Data Clustering

    DEFF Research Database (Denmark)

    Zimek, Arthur; Assent, Ira; Vreeken, Jilles

    2014-01-01

    Discovering clusters in subspaces, or subspace clustering and related clustering paradigms, is a research field where we find many frequent pattern mining related influences. In fact, as the first algorithms for subspace clustering were based on frequent pattern mining algorithms, it is fair to say...... that frequent pattern mining was at the cradle of subspace clustering—yet, it quickly developed into an independent research field. In this chapter, we discuss how frequent pattern mining algorithms have been extended and generalized towards the discovery of local clusters in high-dimensional data....... In particular, we discuss several example algorithms for subspace clustering or projected clustering as well as point out recent research questions and open topics in this area relevant to researchers in either clustering or pattern mining...

  8. Minimum Cost Multicast Routing Using Ant Colony Optimization Algorithm

    Directory of Open Access Journals (Sweden)

    Xiao-Min Hu

    2013-01-01

    Full Text Available Multicast routing (MR is a technology for delivering network data from some source node(s to a group of destination nodes. The objective of the minimum cost MR (MCMR problem is to find an optimal multicast tree with the minimum cost for MR. This problem is NP complete. In order to tackle the problem, this paper proposes a novel algorithm termed the minimum cost multicast routing ant colony optimization (MCMRACO. Based on the ant colony optimization (ACO framework, the artificial ants in the proposed algorithm use a probabilistic greedy realization of Prim’s algorithm to construct multicast trees. Moving in a cost complete graph (CCG of the network topology, the ants build solutions according to the heuristic and pheromone information. The heuristic information represents problem-specific knowledge for the ants to construct solutions. The pheromone update mechanisms coordinate the ants’ activities by modulating the pheromones. The algorithm can quickly respond to the changes of multicast nodes in a dynamic MR environment. The performance of the proposed algorithm has been compared with published results available in the literature. Results show that the proposed algorithm performs well in both static and dynamic MCMR problems.

  9. Artificial bee colony algorithm for constrained possibilistic portfolio optimization problem

    Science.gov (United States)

    Chen, Wei

    2015-07-01

    In this paper, we discuss the portfolio optimization problem with real-world constraints under the assumption that the returns of risky assets are fuzzy numbers. A new possibilistic mean-semiabsolute deviation model is proposed, in which transaction costs, cardinality and quantity constraints are considered. Due to such constraints the proposed model becomes a mixed integer nonlinear programming problem and traditional optimization methods fail to find the optimal solution efficiently. Thus, a modified artificial bee colony (MABC) algorithm is developed to solve the corresponding optimization problem. Finally, a numerical example is given to illustrate the effectiveness of the proposed model and the corresponding algorithm.

  10. A Developed Artificial Bee Colony Algorithm Based on Cloud Model

    Directory of Open Access Journals (Sweden)

    Ye Jin

    2018-04-01

    Full Text Available The Artificial Bee Colony (ABC algorithm is a bionic intelligent optimization method. The cloud model is a kind of uncertainty conversion model between a qualitative concept T ˜ that is presented by nature language and its quantitative expression, which integrates probability theory and the fuzzy mathematics. A developed ABC algorithm based on cloud model is proposed to enhance accuracy of the basic ABC algorithm and avoid getting trapped into local optima by introducing a new select mechanism, replacing the onlooker bees’ search formula and changing the scout bees’ updating formula. Experiments on CEC15 show that the new algorithm has a faster convergence speed and higher accuracy than the basic ABC and some cloud model based ABC variants.

  11. Algorithm for Spatial Clustering with Obstacles

    OpenAIRE

    El-Sharkawi, Mohamed E.; El-Zawawy, Mohamed A.

    2009-01-01

    In this paper, we propose an efficient clustering technique to solve the problem of clustering in the presence of obstacles. The proposed algorithm divides the spatial area into rectangular cells. Each cell is associated with statistical information that enables us to label the cell as dense or non-dense. We also label each cell as obstructed (i.e. intersects any obstacle) or non-obstructed. Then the algorithm finds the regions (clusters) of connected, dense, non-obstructed cells. Finally, th...

  12. Probabilistic clustering algorithms for fuzzy rules decomposition

    OpenAIRE

    Salgado, Paulo; Igrejas, Getúlio

    2007-01-01

    The fuzzy c-means (FCM) clustering algorithm is the best known and used method in fuzzy clustering and is generally applied to well defined set of data. In this paper a generalized Probabilistic fuzzy c-means (FCM) algorithm is proposed and applied to clustering fuzzy sets. This technique leads to a fuzzy partition of the fuzzy rules, one for each cluster, which corresponds to a new set of fuzzy sub-systems. When applied to the clustering of a flat fuzzy system results a set of...

  13. Multiple Input Delays Estimation Using an Artificial Bee Colony Algorithm

    Directory of Open Access Journals (Sweden)

    Wei-Der Chang

    2013-01-01

    Full Text Available This paper focuses on the time delay estimation of the system described in the form of discrete-time state equation with multiple input delays. To estimate the input delays, a new evolutionary computation called the artificial bee colony (ABC algorithm is utilized. This algorithm is originally motivated from the social behaviors of honeybee organization, and it has been proven to be a powerful means for solving the optimized problem. Based on the proposed algorithm, the unknown system input delays can be further solved by minimizing a quadratic cost function of the system. Two illustrative examples are provided to verify the potential of the presented method in the time delay estimation. Some simulations containing different initial condition examinations and appearance of noises are further given. Numerical results show that the proposed method can do well in the multiple inputs delay estimation of discrete-time state equations.

  14. Clustering algorithms for fuzzy rules decomposition

    OpenAIRE

    Salgado, Paulo; Igrejas, Getúlio

    2007-01-01

    This paper presents the development, testing and evaluation of generalized Possibilistic fuzzy c-means (FCM) algorithms applied to fuzzy sets. Clustering is formulated as a constrained minimization problem, whose solution depends on the constraints imposed on the membership function of the cluster and on the relevance measure of the fuzzy rules. This fuzzy clustering of fuzzy rules leads to a fuzzy partition of the fuzzy rules, one for each cluster, which corresp...

  15. Data clustering theory, algorithms, and applications

    CERN Document Server

    Gan, Guojun; Wu, Jianhong

    2007-01-01

    Cluster analysis is an unsupervised process that divides a set of objects into homogeneous groups. This book starts with basic information on cluster analysis, including the classification of data and the corresponding similarity measures, followed by the presentation of over 50 clustering algorithms in groups according to some specific baseline methodologies such as hierarchical, center-based, and search-based methods. As a result, readers and users can easily identify an appropriate algorithm for their applications and compare novel ideas with existing results. The book also provides examples of clustering applications to illustrate the advantages and shortcomings of different clustering architectures and algorithms. Application areas include pattern recognition, artificial intelligence, information technology, image processing, biology, psychology, and marketing. Readers also learn how to perform cluster analysis with the C/C++ and MATLAB® programming languages.

  16. Semantic based cluster content discovery in description first clustering algorithm

    International Nuclear Information System (INIS)

    Khan, M.W.; Asif, H.M.S.

    2017-01-01

    In the field of data analytics grouping of like documents in textual data is a serious problem. A lot of work has been done in this field and many algorithms have purposed. One of them is a category of algorithms which firstly group the documents on the basis of similarity and then assign the meaningful labels to those groups. Description first clustering algorithm belong to the category in which the meaningful description is deduced first and then relevant documents are assigned to that description. LINGO (Label Induction Grouping Algorithm) is the algorithm of description first clustering category which is used for the automatic grouping of documents obtained from search results. It uses LSI (Latent Semantic Indexing); an IR (Information Retrieval) technique for induction of meaningful labels for clusters and VSM (Vector Space Model) for cluster content discovery. In this paper we present the LINGO while it is using LSI during cluster label induction and cluster content discovery phase. Finally, we compare results obtained from the said algorithm while it uses VSM and Latent semantic analysis during cluster content discovery phase. (author)

  17. Semantic Based Cluster Content Discovery in Description First Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    MUHAMMAD WASEEM KHAN

    2017-01-01

    Full Text Available In the field of data analytics grouping of like documents in textual data is a serious problem. A lot of work has been done in this field and many algorithms have purposed. One of them is a category of algorithms which firstly group the documents on the basis of similarity and then assign the meaningful labels to those groups. Description first clustering algorithm belong to the category in which the meaningful description is deduced first and then relevant documents are assigned to that description. LINGO (Label Induction Grouping Algorithm is the algorithm of description first clustering category which is used for the automatic grouping of documents obtained from search results. It uses LSI (Latent Semantic Indexing; an IR (Information Retrieval technique for induction of meaningful labels for clusters and VSM (Vector Space Model for cluster content discovery. In this paper we present the LINGO while it is using LSI during cluster label induction and cluster content discovery phase. Finally, we compare results obtained from the said algorithm while it uses VSM and Latent semantic analysis during cluster content discovery phase.

  18. Ant Colony Algorithm and Simulation for Robust Airport Gate Assignment

    Directory of Open Access Journals (Sweden)

    Hui Zhao

    2014-01-01

    Full Text Available Airport gate assignment is core task for airport ground operations. Due to the fact that the departure and arrival time of flights may be influenced by many random factors, the airport gate assignment scheme may encounter gate conflict and many other problems. This paper aims at finding a robust solution for airport gate assignment problem. A mixed integer model is proposed to formulate the problem, and colony algorithm is designed to solve this model. Simulation result shows that, in consideration of robustness, the ability of antidisturbance for airport gate assignment scheme has much improved.

  19. A scheduling algorithm based on Clara clustering

    Science.gov (United States)

    Kuang, Ling; Zhang, Lichen

    2017-08-01

    Task scheduling is a key issue in cloud computing. A new algorithm for queuing task scheduling based on Clara clustering and SJF cloud computing is proposed to introduce the Clara clustering for the shortcomings of SJF algorithm load imbalance. The Clara clustering method prepares the task clustering based on the task execution time and the waiting time of the task, and then divides the task into three groups according to the reference point obtained by the clustering. Based on the number of tasks per group in the proportion of the total number of tasks assigned to the implementation of the quota. Each queue team will perform task scheduling based on these quotas and SJF. The simulation results show that the algorithm has good load balancing and system performance.

  20. An artificial bee colony algorithm for uncertain portfolio selection.

    Science.gov (United States)

    Chen, Wei

    2014-01-01

    Portfolio selection is an important issue for researchers and practitioners. In this paper, under the assumption that security returns are given by experts' evaluations rather than historical data, we discuss the portfolio adjusting problem which takes transaction costs and diversification degree of portfolio into consideration. Uncertain variables are employed to describe the security returns. In the proposed mean-variance-entropy model, the uncertain mean value of the return is used to measure investment return, the uncertain variance of the return is used to measure investment risk, and the entropy is used to measure diversification degree of portfolio. In order to solve the proposed model, a modified artificial bee colony (ABC) algorithm is designed. Finally, a numerical example is given to illustrate the modelling idea and the effectiveness of the proposed algorithm.

  1. Self-organization and clustering algorithms

    Science.gov (United States)

    Bezdek, James C.

    1991-01-01

    Kohonen's feature maps approach to clustering is often likened to the k or c-means clustering algorithms. Here, the author identifies some similarities and differences between the hard and fuzzy c-Means (HCM/FCM) or ISODATA algorithms and Kohonen's self-organizing approach. The author concludes that some differences are significant, but at the same time there may be some important unknown relationships between the two methodologies. Several avenues of research are proposed.

  2. Efficient distribution of toy products using ant colony optimization algorithm

    Science.gov (United States)

    Hidayat, S.; Nurpraja, C. A.

    2017-12-01

    CV Atham Toys (CVAT) produces wooden toys and furniture, comprises 13 small and medium industries. CVAT always attempt to deliver customer orders on time but delivery costs are high. This is because of inadequate infrastructure such that delivery routes are long, car maintenance costs are high, while fuel subsidy by the government is still temporary. This study seeks to minimize the cost of product distribution based on the shortest route using one of five Ant Colony Optimization (ACO) algorithms to solve the Vehicle Routing Problem (VRP). This study concludes that the best of the five is the Ant Colony System (ACS) algorithm. The best route in 1st week gave a total distance of 124.11 km at a cost of Rp 66,703.75. The 2nd week route gave a total distance of 132.27 km at a cost of Rp 71,095.13. The 3rd week best route gave a total distance of 122.70 km with a cost of Rp 65,951.25. While the 4th week gave a total distance of 132.27 km at a cost of Rp 74,083.63. Prior to this study there was no effort to calculate these figures.

  3. Multimodal optimization by using hybrid of artificial bee colony algorithm and BFGS algorithm

    Science.gov (United States)

    Anam, S.

    2017-10-01

    Optimization has become one of the important fields in Mathematics. Many problems in engineering and science can be formulated into optimization problems. They maybe have many local optima. The optimization problem with many local optima, known as multimodal optimization problem, is how to find the global solution. Several metaheuristic methods have been proposed to solve multimodal optimization problems such as Particle Swarm Optimization (PSO), Genetics Algorithm (GA), Artificial Bee Colony (ABC) algorithm, etc. The performance of the ABC algorithm is better than or similar to those of other population-based algorithms with the advantage of employing a fewer control parameters. The ABC algorithm also has the advantages of strong robustness, fast convergence and high flexibility. However, it has the disadvantages premature convergence in the later search period. The accuracy of the optimal value cannot meet the requirements sometimes. Broyden-Fletcher-Goldfarb-Shanno (BFGS) algorithm is a good iterative method for finding a local optimum. Compared with other local optimization methods, the BFGS algorithm is better. Based on the advantages of the ABC algorithm and the BFGS algorithm, this paper proposes a hybrid of the artificial bee colony algorithm and the BFGS algorithm to solve the multimodal optimization problem. The first step is that the ABC algorithm is run to find a point. In the second step is that the point obtained by the first step is used as an initial point of BFGS algorithm. The results show that the hybrid method can overcome from the basic ABC algorithm problems for almost all test function. However, if the shape of function is flat, the proposed method cannot work well.

  4. Software Piracy Detection Model Using Ant Colony Optimization Algorithm

    Science.gov (United States)

    Astiqah Omar, Nor; Zakuan, Zeti Zuryani Mohd; Saian, Rizauddin

    2017-06-01

    Internet enables information to be accessible anytime and anywhere. This scenario creates an environment whereby information can be easily copied. Easy access to the internet is one of the factors which contribute towards piracy in Malaysia as well as the rest of the world. According to a survey conducted by Compliance Gap BSA Global Software Survey in 2013 on software piracy, found out that 43 percent of the software installed on PCs around the world was not properly licensed, the commercial value of the unlicensed installations worldwide was reported to be 62.7 billion. Piracy can happen anywhere including universities. Malaysia as well as other countries in the world is faced with issues of piracy committed by the students in universities. Piracy in universities concern about acts of stealing intellectual property. It can be in the form of software piracy, music piracy, movies piracy and piracy of intellectual materials such as books, articles and journals. This scenario affected the owner of intellectual property as their property is in jeopardy. This study has developed a classification model for detecting software piracy. The model was developed using a swarm intelligence algorithm called the Ant Colony Optimization algorithm. The data for training was collected by a study conducted in Universiti Teknologi MARA (Perlis). Experimental results show that the model detection accuracy rate is better as compared to J48 algorithm.

  5. Hierarchical artificial bee colony algorithm for RFID network planning optimization.

    Science.gov (United States)

    Ma, Lianbo; Chen, Hanning; Hu, Kunyuan; Zhu, Yunlong

    2014-01-01

    This paper presents a novel optimization algorithm, namely, hierarchical artificial bee colony optimization, called HABC, to tackle the radio frequency identification network planning (RNP) problem. In the proposed multilevel model, the higher-level species can be aggregated by the subpopulations from lower level. In the bottom level, each subpopulation employing the canonical ABC method searches the part-dimensional optimum in parallel, which can be constructed into a complete solution for the upper level. At the same time, the comprehensive learning method with crossover and mutation operators is applied to enhance the global search ability between species. Experiments are conducted on a set of 10 benchmark optimization problems. The results demonstrate that the proposed HABC obtains remarkable performance on most chosen benchmark functions when compared to several successful swarm intelligence and evolutionary algorithms. Then HABC is used for solving the real-world RNP problem on two instances with different scales. Simulation results show that the proposed algorithm is superior for solving RNP, in terms of optimization accuracy and computation robustness.

  6. Hierarchical Artificial Bee Colony Algorithm for RFID Network Planning Optimization

    Directory of Open Access Journals (Sweden)

    Lianbo Ma

    2014-01-01

    Full Text Available This paper presents a novel optimization algorithm, namely, hierarchical artificial bee colony optimization, called HABC, to tackle the radio frequency identification network planning (RNP problem. In the proposed multilevel model, the higher-level species can be aggregated by the subpopulations from lower level. In the bottom level, each subpopulation employing the canonical ABC method searches the part-dimensional optimum in parallel, which can be constructed into a complete solution for the upper level. At the same time, the comprehensive learning method with crossover and mutation operators is applied to enhance the global search ability between species. Experiments are conducted on a set of 10 benchmark optimization problems. The results demonstrate that the proposed HABC obtains remarkable performance on most chosen benchmark functions when compared to several successful swarm intelligence and evolutionary algorithms. Then HABC is used for solving the real-world RNP problem on two instances with different scales. Simulation results show that the proposed algorithm is superior for solving RNP, in terms of optimization accuracy and computation robustness.

  7. Road Network Vulnerability Analysis Based on Improved Ant Colony Algorithm

    Directory of Open Access Journals (Sweden)

    Yunpeng Wang

    2014-01-01

    Full Text Available We present an improved ant colony algorithm-based approach to assess the vulnerability of a road network and identify the critical infrastructures. This approach improves computational efficiency and allows for its applications in large-scale road networks. This research involves defining the vulnerability conception, modeling the traffic utility index and the vulnerability of the road network, and identifying the critical infrastructures of the road network. We apply the approach to a simple test road network and a real road network to verify the methodology. The results show that vulnerability is directly related to traffic demand and increases significantly when the demand approaches capacity. The proposed approach reduces the computational burden and may be applied in large-scale road network analysis. It can be used as a decision-supporting tool for identifying critical infrastructures in transportation planning and management.

  8. Automatic fault extraction using a modified ant-colony algorithm

    International Nuclear Information System (INIS)

    Zhao, Junsheng; Sun, Sam Zandong

    2013-01-01

    The basis of automatic fault extraction is seismic attributes, such as the coherence cube which is always used to identify a fault by the minimum value. The biggest challenge in automatic fault extraction is noise, including that of seismic data. However, a fault has a better spatial continuity in certain direction, which makes it quite different from noise. Considering this characteristic, a modified ant-colony algorithm is introduced into automatic fault identification and tracking, where the gradient direction and direction consistency are used as constraints. Numerical model test results show that this method is feasible and effective in automatic fault extraction and noise suppression. The application of field data further illustrates its validity and superiority. (paper)

  9. Efficient Cluster Head Selection Algorithm for MANET

    Directory of Open Access Journals (Sweden)

    Khalid Hussain

    2013-01-01

    Full Text Available In mobile ad hoc network (MANET cluster head selection is considered a gigantic challenge. In wireless sensor network LEACH protocol can be used to select cluster head on the bases of energy, but it is still a dispute in mobil ad hoc networks and especially when nodes are itinerant. In this paper we proposed an efficient cluster head selection algorithm (ECHSA, for selection of the cluster head efficiently in Mobile ad hoc networks. We evaluate our proposed algorithm through simulation in OMNet++ as well as on test bed; we experience the result according to our assumption. For further evaluation we also compare our proposed protocol with several other protocols like LEACH-C and consequences show perfection.

  10. The Analysis of a Simple k-Means Clustering Algorithm

    National Research Council Canada - National Science Library

    Kanungo, T; Mount, D. M; Netanyahu, N. S; Piatko, C; Silverman, R; Wu, A. Y

    2000-01-01

    .... A popular heuristic for k-means clustering is Lloyd's algorithm. In this paper, we present a simple and efficient implementation of Lloyd's k-means clustering algorithm, which we call the filtering algorithm...

  11. Bee Colony Optimization - part I: The algorithm overview

    Directory of Open Access Journals (Sweden)

    Davidović Tatjana

    2015-01-01

    Full Text Available This paper is an extensive survey of the Bee Colony Optimization (BCO algorithm, proposed for the first time in 2001. BCO and its numerous variants belong to a class of nature-inspired meta-heuristic methods, based on the foraging habits of honeybees. Our main goal is to promote it among the wide operations research community. BCO is a simple, but efficient meta-heuristic technique that has been successfully applied to many optimization problems, mostly in transport, location and scheduling fields. Firstly, we shall give a brief overview of the other meta-heuristics inspired by bees’ foraging principles pointing out the differences between them. Then, we shall provide the detailed description of the BCO algorithm and its modifications, including the strategies for BCO parallelization, and giving the preliminary results regarding its convergence. The application survey is elaborated in Part II of our paper. [Projekat Ministarstva nauke Republike Srbije, br. OI174010, br. OI174033 i br. TR36002

  12. GA-Based Membrane Evolutionary Algorithm for Ensemble Clustering

    OpenAIRE

    Wang, Yanhua; Liu, Xiyu; Xiang, Laisheng

    2017-01-01

    Ensemble clustering can improve the generalization ability of a single clustering algorithm and generate a more robust clustering result by integrating multiple base clusterings, so it becomes the focus of current clustering research. Ensemble clustering aims at finding a consensus partition which agrees as much as possible with base clusterings. Genetic algorithm is a highly parallel, stochastic, and adaptive search algorithm developed from the natural selection and evolutionary mechanism of...

  13. Genetic algorithm optimization of atomic clusters

    International Nuclear Information System (INIS)

    Morris, J.R.; Deaven, D.M.; Ho, K.M.; Wang, C.Z.; Pan, B.C.; Wacker, J.G.; Turner, D.E.; Iowa State Univ., Ames, IA

    1996-01-01

    The authors have been using genetic algorithms to study the structures of atomic clusters and related problems. This is a problem where local minima are easy to locate, but barriers between the many minima are large, and the number of minima prohibit a systematic search. They use a novel mating algorithm that preserves some of the geometrical relationship between atoms, in order to ensure that the resultant structures are likely to inherit the best features of the parent clusters. Using this approach, they have been able to find lower energy structures than had been previously obtained. Most recently, they have been able to turn around the building block idea, using optimized structures from the GA to learn about systematic structural trends. They believe that an effective GA can help provide such heuristic information, and (conversely) that such information can be introduced back into the algorithm to assist in the search process

  14. Application of ant colony Algorithm and particle swarm optimization in architectural design

    Science.gov (United States)

    Song, Ziyi; Wu, Yunfa; Song, Jianhua

    2018-02-01

    By studying the development of ant colony algorithm and particle swarm algorithm, this paper expounds the core idea of the algorithm, explores the combination of algorithm and architectural design, sums up the application rules of intelligent algorithm in architectural design, and combines the characteristics of the two algorithms, obtains the research route and realization way of intelligent algorithm in architecture design. To establish algorithm rules to assist architectural design. Taking intelligent algorithm as the beginning of architectural design research, the authors provide the theory foundation of ant colony Algorithm and particle swarm algorithm in architectural design, popularize the application range of intelligent algorithm in architectural design, and provide a new idea for the architects.

  15. Chaotic map clustering algorithm for EEG analysis

    Science.gov (United States)

    Bellotti, R.; De Carlo, F.; Stramaglia, S.

    2004-03-01

    The non-parametric chaotic map clustering algorithm has been applied to the analysis of electroencephalographic signals, in order to recognize the Huntington's disease, one of the most dangerous pathologies of the central nervous system. The performance of the method has been compared with those obtained through parametric algorithms, as K-means and deterministic annealing, and supervised multi-layer perceptron. While supervised neural networks need a training phase, performed by means of data tagged by the genetic test, and the parametric methods require a prior choice of the number of classes to find, the chaotic map clustering gives a natural evidence of the pathological class, without any training or supervision, thus providing a new efficient methodology for the recognition of patterns affected by the Huntington's disease.

  16. Application for Suggesting Restaurants Using Clustering Algorithms

    Directory of Open Access Journals (Sweden)

    Iulia Alexandra IANCU

    2014-10-01

    Full Text Available The aim of this article is to present an application whose purpose is to make suggestions of restaurants to users. The application uses as input the descriptions of restaurants, reviews, user reviews available on the specialized Internet sites and blogs. In the application there are used processing techniques of natural language implemented using parsers, clustering algorithms and techniques for data collection from the Internet through web crawlers.

  17. Application of the artificial bee colony algorithm for solving the set covering problem.

    Science.gov (United States)

    Crawford, Broderick; Soto, Ricardo; Cuesta, Rodrigo; Paredes, Fernando

    2014-01-01

    The set covering problem is a formal model for many practical optimization problems. In the set covering problem the goal is to choose a subset of the columns of minimal cost that covers every row. Here, we present a novel application of the artificial bee colony algorithm to solve the non-unicost set covering problem. The artificial bee colony algorithm is a recent swarm metaheuristic technique based on the intelligent foraging behavior of honey bees. Experimental results show that our artificial bee colony algorithm is competitive in terms of solution quality with other recent metaheuristic approaches for the set covering problem.

  18. A PSO-Based Subtractive Data Clustering Algorithm

    OpenAIRE

    Gamal Abdel-Azeem; Mahmoud Marie; Rehab Abdel-Kader; Mariam El-Tarabily

    2013-01-01

    There is a tremendous proliferation in the amount of information available on the largest shared information source, the World Wide Web. Fast and high-quality clustering algorithms play an important role in helping users to effectively navigate, summarize, and organize the information. Recent studies have shown that partitional clustering algorithms such as the k-means algorithm are the most popular algorithms for clustering large datasets. The major problem with partitional clustering algori...

  19. Dimensionality Reduction Particle Swarm Algorithm for High Dimensional Clustering

    Energy Technology Data Exchange (ETDEWEB)

    Cui, Xiaohui [ORNL; ST Charles, Jesse Lee [ORNL; Potok, Thomas E [ORNL; Beaver, Justin M [ORNL

    2008-01-01

    The Particle Swarm Optimization (PSO) clustering algorithm can generate more compact clustering results than the traditional K-means clustering algorithm. However, when clustering high dimensional datasets, the PSO clustering algorithm is notoriously slow because its computation cost increases exponentially with the size of the dataset dimension. Dimensionality reduction techniques offer solutions that both significantly improve the computation time, and yield reasonably accurate clustering results in high dimensional data analysis. In this paper, we introduce research that combines different dimensionality reduction techniques with the PSO clustering algorithm in order to reduce the complexity of high dimensional datasets and speed up the PSO clustering process. We report significant improvements in total runtime. Moreover, the clustering accuracy of the dimensionality reduction PSO clustering algorithm is comparable to the one that uses full dimension space.

  20. Application of the Artificial Bee Colony Algorithm for Solving the Set Covering Problem

    OpenAIRE

    Crawford, Broderick; Soto, Ricardo; Cuesta, Rodrigo; Paredes, Fernando

    2014-01-01

    The set covering problem is a formal model for many practical optimization problems. In the set covering problem the goal is to choose a subset of the columns of minimal cost that covers every row. Here, we present a novel application of the artificial bee colony algorithm to solve the non-unicost set covering problem. The artificial bee colony algorithm is a recent swarm metaheuristic technique based on the intelligent foraging behavior of honey bees. Experimental results show...

  1. A cluster algorithm for jet studies

    International Nuclear Information System (INIS)

    Daum, H.J.; Meyer, H.; Buerger, J.

    1980-10-01

    A procedure is described which determines the number of jets in hadronic final states by means of a cluster algorithm. In addition it yields a measurement of the energy and the direction of each jet. The properties of this method are studied using Monte Carlo simulations of different types of e + e - -annihilation final states. It is shown that in case of 3-jet events direct comparison with the underlying parton structure can be made. Possible further applications of this method are discussed. (orig.)

  2. Parameter Selection for Ant Colony Algorithm Based on Bacterial Foraging Algorithm

    Directory of Open Access Journals (Sweden)

    Peng Li

    2016-01-01

    Full Text Available The optimal performance of the ant colony algorithm (ACA mainly depends on suitable parameters; therefore, parameter selection for ACA is important. We propose a parameter selection method for ACA based on the bacterial foraging algorithm (BFA, considering the effects of coupling between different parameters. Firstly, parameters for ACA are mapped into a multidimensional space, using a chemotactic operator to ensure that each parameter group approaches the optimal value, speeding up the convergence for each parameter set. Secondly, the operation speed for optimizing the entire parameter set is accelerated using a reproduction operator. Finally, the elimination-dispersal operator is used to strengthen the global optimization of the parameters, which avoids falling into a local optimal solution. In order to validate the effectiveness of this method, the results were compared with those using a genetic algorithm (GA and a particle swarm optimization (PSO, and simulations were conducted using different grid maps for robot path planning. The results indicated that parameter selection for ACA based on BFA was the superior method, able to determine the best parameter combination rapidly, accurately, and effectively.

  3. Fidelity-Based Ant Colony Algorithm with Q-learning of Quantum System

    Science.gov (United States)

    Liao, Qin; Guo, Ying; Tu, Yifeng; Zhang, Hang

    2018-03-01

    Quantum ant colony algorithm (ACA) has potential applications in quantum information processing, such as solutions of traveling salesman problem, zero-one knapsack problem, robot route planning problem, and so on. To shorten the search time of the ACA, we suggest the fidelity-based ant colony algorithm (FACA) for the control of quantum system. Motivated by structure of the Q-learning algorithm, we demonstrate the combination of a FACA with the Q-learning algorithm and suggest the design of a fidelity-based ant colony algorithm with the Q-learning to improve the performance of the FACA in a spin-1/2 quantum system. The numeric simulation results show that the FACA with the Q-learning can efficiently avoid trapping into local optimal policies and increase the speed of convergence process of quantum system.

  4. Multiconstrained Network Intensive Vehicle Routing Adaptive Ant Colony Algorithm in the Context of Neural Network Analysis

    Directory of Open Access Journals (Sweden)

    Shaopei Chen

    2017-01-01

    Full Text Available Neural network models have recently made significant achievements in solving vehicle scheduling problems. Adaptive ant colony algorithm provides a new idea for neural networks to solve complex system problems of multiconstrained network intensive vehicle routing models. The pheromone in the path is changed by adjusting the volatile factors in the operation process adaptively. It effectively overcomes the tendency of the traditional ant colony algorithm to fall easily into the local optimal solution and slow convergence speed to search for the global optimal solution. The multiconstrained network intensive vehicle routing algorithm based on adaptive ant colony algorithm in this paper refers to the interaction between groups. Adaptive transfer and pheromone update strategies are introduced based on the traditional ant colony algorithm to optimize the selection, update, and coordination mechanisms of the algorithm further. Thus, the search task of the objective function for a feasible solution is completed by the search ants. Through the division and collaboration of different kinds of ants, pheromone adaptive strategy is combined with polymorphic ant colony algorithm. It can effectively overcome some disadvantages, such as premature stagnation, and has a theoretical significance to the study of large-scale multiconstrained vehicle routing problems in complex traffic network systems.

  5. Genetic Bee Colony (GBC) algorithm: A new gene selection method for microarray cancer classification.

    Science.gov (United States)

    Alshamlan, Hala M; Badr, Ghada H; Alohali, Yousef A

    2015-06-01

    Naturally inspired evolutionary algorithms prove effectiveness when used for solving feature selection and classification problems. Artificial Bee Colony (ABC) is a relatively new swarm intelligence method. In this paper, we propose a new hybrid gene selection method, namely Genetic Bee Colony (GBC) algorithm. The proposed algorithm combines the used of a Genetic Algorithm (GA) along with Artificial Bee Colony (ABC) algorithm. The goal is to integrate the advantages of both algorithms. The proposed algorithm is applied to a microarray gene expression profile in order to select the most predictive and informative genes for cancer classification. In order to test the accuracy performance of the proposed algorithm, extensive experiments were conducted. Three binary microarray datasets are use, which include: colon, leukemia, and lung. In addition, another three multi-class microarray datasets are used, which are: SRBCT, lymphoma, and leukemia. Results of the GBC algorithm are compared with our recently proposed technique: mRMR when combined with the Artificial Bee Colony algorithm (mRMR-ABC). We also compared the combination of mRMR with GA (mRMR-GA) and Particle Swarm Optimization (mRMR-PSO) algorithms. In addition, we compared the GBC algorithm with other related algorithms that have been recently published in the literature, using all benchmark datasets. The GBC algorithm shows superior performance as it achieved the highest classification accuracy along with the lowest average number of selected genes. This proves that the GBC algorithm is a promising approach for solving the gene selection problem in both binary and multi-class cancer classification. Copyright © 2015 Elsevier Ltd. All rights reserved.

  6. Parallelization of Edge Detection Algorithm using MPI on Beowulf Cluster

    Science.gov (United States)

    Haron, Nazleeni; Amir, Ruzaini; Aziz, Izzatdin A.; Jung, Low Tan; Shukri, Siti Rohkmah

    In this paper, we present the design of parallel Sobel edge detection algorithm using Foster's methodology. The parallel algorithm is implemented using MPI message passing library and master/slave algorithm. Every processor performs the same sequential algorithm but on different part of the image. Experimental results conducted on Beowulf cluster are presented to demonstrate the performance of the parallel algorithm.

  7. A Multipath Routing Protocol Based on Clustering and Ant Colony Optimization for Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Jing Yang

    2010-05-01

    Full Text Available For monitoring burst events in a kind of reactive wireless sensor networks (WSNs, a multipath routing protocol (MRP based on dynamic clustering and ant colony optimization (ACO is proposed.. Such an approach can maximize the network lifetime and reduce the energy consumption. An important attribute of WSNs is their limited power supply, and therefore some metrics (such as energy consumption of communication among nodes, residual energy, path length were considered as very important criteria while designing routing in the MRP. Firstly, a cluster head (CH is selected among nodes located in the event area according to some parameters, such as residual energy. Secondly, an improved ACO algorithm is applied in the search for multiple paths between the CH and sink node. Finally, the CH dynamically chooses a route to transmit data with a probability that depends on many path metrics, such as energy consumption. The simulation results show that MRP can prolong the network lifetime, as well as balance of energy consumption among nodes and reduce the average energy consumption effectively.

  8. A new hybrid imperialist competitive algorithm on data clustering

    Indian Academy of Sciences (India)

    In this paper, we purpose a novel algorithm that is based on combining two algorithms of clustering; -means and Modify Imperialist Competitive Algorithm. It is named hybrid K-MICA. In addition, we use a method called modified expectation maximization (EM) to determine number of clusters. The experimented results ...

  9. Single Allocation Hub-and-spoke Networks Design Based on Ant Colony Optimization Algorithm

    Directory of Open Access Journals (Sweden)

    Yang Pingle

    2014-10-01

    Full Text Available Capacitated single allocation hub-and-spoke networks can be abstracted as a mixed integer linear programming model equation with three variables. Introducing an improved ant colony algorithm, which has six local search operators. Meanwhile, introducing the "Solution Pair" concept to decompose and optimize the composition of the problem, the problem can become more specific and effectively meet the premise and advantages of using ant colony algorithm. Finally, location simulation experiment is made according to Australia Post data to demonstrate this algorithm has good efficiency and stability for solving this problem.

  10. Energy Aware Clustering Algorithms for Wireless Sensor Networks

    Science.gov (United States)

    Rakhshan, Noushin; Rafsanjani, Marjan Kuchaki; Liu, Chenglian

    2011-09-01

    The sensor nodes deployed in wireless sensor networks (WSNs) are extremely power constrained, so maximizing the lifetime of the entire networks is mainly considered in the design. In wireless sensor networks, hierarchical network structures have the advantage of providing scalable and energy efficient solutions. In this paper, we investigate different clustering algorithms for WSNs and also compare these clustering algorithms based on metrics such as clustering distribution, cluster's load balancing, Cluster Head's (CH) selection strategy, CH's role rotation, node mobility, clusters overlapping, intra-cluster communications, reliability, security and location awareness.

  11. A Novel Clustering Algorithm Inspired by Membrane Computing

    Directory of Open Access Journals (Sweden)

    Hong Peng

    2015-01-01

    Full Text Available P systems are a class of distributed parallel computing models; this paper presents a novel clustering algorithm, which is inspired from mechanism of a tissue-like P system with a loop structure of cells, called membrane clustering algorithm. The objects of the cells express the candidate centers of clusters and are evolved by the evolution rules. Based on the loop membrane structure, the communication rules realize a local neighborhood topology, which helps the coevolution of the objects and improves the diversity of objects in the system. The tissue-like P system can effectively search for the optimal partitioning with the help of its parallel computing advantage. The proposed clustering algorithm is evaluated on four artificial data sets and six real-life data sets. Experimental results show that the proposed clustering algorithm is superior or competitive to k-means algorithm and several evolutionary clustering algorithms recently reported in the literature.

  12. Blind Source Separation Based on Covariance Ratio and Artificial Bee Colony Algorithm

    Directory of Open Access Journals (Sweden)

    Lei Chen

    2014-01-01

    Full Text Available The computation amount in blind source separation based on bioinspired intelligence optimization is high. In order to solve this problem, we propose an effective blind source separation algorithm based on the artificial bee colony algorithm. In the proposed algorithm, the covariance ratio of the signals is utilized as the objective function and the artificial bee colony algorithm is used to solve it. The source signal component which is separated out, is then wiped off from mixtures using the deflation method. All the source signals can be recovered successfully by repeating the separation process. Simulation experiments demonstrate that significant improvement of the computation amount and the quality of signal separation is achieved by the proposed algorithm when compared to previous algorithms.

  13. An ant colony based resilience approach to cascading failures in cluster supply network

    Science.gov (United States)

    Wang, Yingcong; Xiao, Renbin

    2016-11-01

    Cluster supply chain network is a typical complex network and easily suffers cascading failures under disruption events, which is caused by the under-load of enterprises. Improving network resilience can increase the ability of recovery from cascading failures. Social resilience is found in ant colony and comes from ant's spatial fidelity zones (SFZ). Starting from the under-load failures, this paper proposes a resilience method to cascading failures in cluster supply chain network by leveraging on social resilience of ant colony. First, the mapping between ant colony SFZ and cluster supply chain network SFZ is presented. Second, a new cascading model for cluster supply chain network is constructed based on under-load failures. Then, the SFZ-based resilience method and index to cascading failures are developed according to ant colony's social resilience. Finally, a numerical simulation and a case study are used to verify the validity of the cascading model and the resilience method. Experimental results show that, the cluster supply chain network becomes resilient to cascading failures under the SFZ-based resilience method, and the cluster supply chain network resilience can be enhanced by improving the ability of enterprises to recover and adjust.

  14. Hybrid Swarm Intelligence Energy Efficient Clustered Routing Algorithm for Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Rajeev Kumar

    2016-01-01

    Full Text Available Currently, wireless sensor networks (WSNs are used in many applications, namely, environment monitoring, disaster management, industrial automation, and medical electronics. Sensor nodes carry many limitations like low battery life, small memory space, and limited computing capability. To create a wireless sensor network more energy efficient, swarm intelligence technique has been applied to resolve many optimization issues in WSNs. In many existing clustering techniques an artificial bee colony (ABC algorithm is utilized to collect information from the field periodically. Nevertheless, in the event based applications, an ant colony optimization (ACO is a good solution to enhance the network lifespan. In this paper, we combine both algorithms (i.e., ABC and ACO and propose a new hybrid ABCACO algorithm to solve a Nondeterministic Polynomial (NP hard and finite problem of WSNs. ABCACO algorithm is divided into three main parts: (i selection of optimal number of subregions and further subregion parts, (ii cluster head selection using ABC algorithm, and (iii efficient data transmission using ACO algorithm. We use a hierarchical clustering technique for data transmission; the data is transmitted from member nodes to the subcluster heads and then from subcluster heads to the elected cluster heads based on some threshold value. Cluster heads use an ACO algorithm to discover the best route for data transmission to the base station (BS. The proposed approach is very useful in designing the framework for forest fire detection and monitoring. The simulation results show that the ABCACO algorithm enhances the stability period by 60% and also improves the goodput by 31% against LEACH and WSNCABC, respectively.

  15. URL Mining Using Agglomerative Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    Chinmay R. Deshmukh

    2015-02-01

    Full Text Available Abstract The tremendous growth of the web world incorporates application of data mining techniques to the web logs. Data Mining and World Wide Web encompasses an important and active area of research. Web log mining is analysis of web log files with web pages sequences. Web mining is broadly classified as web content mining web usage mining and web structure mining. Web usage mining is a technique to discover usage patterns from Web data in order to understand and better serve the needs of Web-based applications. URL mining refers to a subclass of Web mining that helps us to investigate the details of a Uniform Resource Locator. URL mining can be advantageous in the fields of security and protection. The paper introduces a technique for mining a collection of user transactions with an Internet search engine to discover clusters of similar queries and similar URLs. The information we exploit is a clickthrough data each record consist of a users query to a search engine along with the URL which the user selected from among the candidates offered by search engine. By viewing this dataset as a bipartite graph with the vertices on one side corresponding to queries and on the other side to URLs one can apply an agglomerative clustering algorithm to the graphs vertices to identify related queries and URLs.

  16. A Dynamic Fuzzy Cluster Algorithm for Time Series

    Directory of Open Access Journals (Sweden)

    Min Ji

    2013-01-01

    clustering time series by introducing the definition of key point and improving FCM algorithm. The proposed algorithm works by determining those time series whose class labels are vague and further partitions them into different clusters over time. The main advantage of this approach compared with other existing algorithms is that the property of some time series belonging to different clusters over time can be partially revealed. Results from simulation-based experiments on geographical data demonstrate the excellent performance and the desired results have been obtained. The proposed algorithm can be applied to solve other clustering problems in data mining.

  17. Robustness of Multiple Clustering Algorithms on Hyperspectral Images

    National Research Council Canada - National Science Library

    Williams, Jason P

    2007-01-01

    .... Various clustering algorithms were employed, including a hierarchical method, ISODATA, K-means, and X-means, and were used on a simple two dimensional dataset in order to discover potential problems with the algorithms...

  18. Performance Evaluation of Spectral Clustering Algorithm using Various Clustering Validity Indices

    OpenAIRE

    M. T. Somashekara; D. Manjunatha

    2014-01-01

    In spite of the popularity of spectral clustering algorithm, the evaluation procedures are still in developmental stage. In this article, we have taken benchmarking IRIS dataset for performing comparative study of twelve indices for evaluating spectral clustering algorithm. The results of the spectral clustering technique were also compared with k-mean algorithm. The validity of the indices was also verified with accuracy and (Normalized Mutual Information) NMI score. Spectral clustering algo...

  19. Local Community Detection Algorithm Based on Minimal Cluster

    Directory of Open Access Journals (Sweden)

    Yong Zhou

    2016-01-01

    Full Text Available In order to discover the structure of local community more effectively, this paper puts forward a new local community detection algorithm based on minimal cluster. Most of the local community detection algorithms begin from one node. The agglomeration ability of a single node must be less than multiple nodes, so the beginning of the community extension of the algorithm in this paper is no longer from the initial node only but from a node cluster containing this initial node and nodes in the cluster are relatively densely connected with each other. The algorithm mainly includes two phases. First it detects the minimal cluster and then finds the local community extended from the minimal cluster. Experimental results show that the quality of the local community detected by our algorithm is much better than other algorithms no matter in real networks or in simulated networks.

  20. GA-Based Membrane Evolutionary Algorithm for Ensemble Clustering

    Directory of Open Access Journals (Sweden)

    Yanhua Wang

    2017-01-01

    Full Text Available Ensemble clustering can improve the generalization ability of a single clustering algorithm and generate a more robust clustering result by integrating multiple base clusterings, so it becomes the focus of current clustering research. Ensemble clustering aims at finding a consensus partition which agrees as much as possible with base clusterings. Genetic algorithm is a highly parallel, stochastic, and adaptive search algorithm developed from the natural selection and evolutionary mechanism of biology. In this paper, an improved genetic algorithm is designed by improving the coding of chromosome. A new membrane evolutionary algorithm is constructed by using genetic mechanisms as evolution rules and combines with the communication mechanism of cell-like P system. The proposed algorithm is used to optimize the base clusterings and find the optimal chromosome as the final ensemble clustering result. The global optimization ability of the genetic algorithm and the rapid convergence of the membrane system make membrane evolutionary algorithm perform better than several state-of-the-art techniques on six real-world UCI data sets.

  1. GA-Based Membrane Evolutionary Algorithm for Ensemble Clustering.

    Science.gov (United States)

    Wang, Yanhua; Liu, Xiyu; Xiang, Laisheng

    2017-01-01

    Ensemble clustering can improve the generalization ability of a single clustering algorithm and generate a more robust clustering result by integrating multiple base clusterings, so it becomes the focus of current clustering research. Ensemble clustering aims at finding a consensus partition which agrees as much as possible with base clusterings. Genetic algorithm is a highly parallel, stochastic, and adaptive search algorithm developed from the natural selection and evolutionary mechanism of biology. In this paper, an improved genetic algorithm is designed by improving the coding of chromosome. A new membrane evolutionary algorithm is constructed by using genetic mechanisms as evolution rules and combines with the communication mechanism of cell-like P system. The proposed algorithm is used to optimize the base clusterings and find the optimal chromosome as the final ensemble clustering result. The global optimization ability of the genetic algorithm and the rapid convergence of the membrane system make membrane evolutionary algorithm perform better than several state-of-the-art techniques on six real-world UCI data sets.

  2. Cluster fusion algorithm: application to Lennard-Jones clusters

    DEFF Research Database (Denmark)

    Solov'yov, Ilia; Solov'yov, Andrey V.; Greiner, Walter

    2006-01-01

    We present a new general theoretical framework for modelling the cluster structure and apply it to description of the Lennard-Jones clusters. Starting from the initial tetrahedral cluster configuration, adding new atoms to the system and absorbing its energy at each step, we find cluster growing ...

  3. Cluster fusion algorithm: application to Lennard-Jones clusters

    DEFF Research Database (Denmark)

    Solov'yov, Ilia; Solov'yov, Andrey V.; Greiner, Walter

    2008-01-01

    We present a new general theoretical framework for modelling the cluster structure and apply it to description of the Lennard-Jones clusters. Starting from the initial tetrahedral cluster configuration, adding new atoms to the system and absorbing its energy at each step, we find cluster growing...... paths up to the cluster size of 150 atoms. We demonstrate that in this way all known global minima structures of the Lennard-Jones clusters can be found. Our method provides an efficient tool for the calculation and analysis of atomic cluster structure. With its use we justify the magic number sequence...... for the clusters of noble gas atoms and compare it with experimental observations. We report the striking correspondence of the peaks in the dependence of the second derivative of the binding energy per atom on cluster size calculated for the chain of the Lennard-Jones clusters based on the icosahedral symmetry...

  4. APPECT: An Approximate Backbone-Based Clustering Algorithm for Tags

    DEFF Research Database (Denmark)

    Zong, Yu; Xu, Guandong; Jin, Pin

    2011-01-01

    resulting from the severe difficulty of ambiguity, redundancy and less semantic nature of tags. Clustering method is a useful tool to address the aforementioned difficulties. Most of the researches on tag clustering are directly using traditional clustering algorithms such as K-means or Hierarchical...... algorithm for Tags (APPECT). The main steps of APPECT are: (1) we execute the K-means algorithm on a tag similarity matrix for M times and collect a set of tag clustering results Z={C1,C2,…,Cm}; (2) we form the approximate backbone of Z by executing a greedy search; (3) we fix the approximate backbone...... Agglomerative Clustering on tagging data, which possess the inherent drawbacks, such as the sensitivity of initialization. In this paper, we instead make use of the approximate backbone of tag clustering results to find out better tag clusters. In particular, we propose an APProximate backbonE-based Clustering...

  5. Analyzing Job Aware Scheduling Algorithm in Hadoop for Heterogeneous Cluster

    Directory of Open Access Journals (Sweden)

    Mayuri A Mehta

    2015-12-01

    Full Text Available A scheduling algorithm is required to efficiently manage cluster resources in a Hadoop cluster, thereby to increase resource utilization and to reduce response time. The job aware scheduling algorithm schedules non-local map tasks of jobs based on job execution time, earliest deadline first or workload of the job. In this paper, we present the performance evaluation of the job aware scheduling algorithm using MapReduce WordCount benchmark. The experimental results are compared with matchmaking scheduling algorithm. The results show that the job aware scheduling algorithm reduces average waiting time and memory wastage considerably as compared to matchmaking algorithm.

  6. A Flocking Based algorithm for Document Clustering Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Cui, Xiaohui [ORNL; Gao, Jinzhu [ORNL; Potok, Thomas E [ORNL

    2006-01-01

    Social animals or insects in nature often exhibit a form of emergent collective behavior known as flocking. In this paper, we present a novel Flocking based approach for document clustering analysis. Our Flocking clustering algorithm uses stochastic and heuristic principles discovered from observing bird flocks or fish schools. Unlike other partition clustering algorithm such as K-means, the Flocking based algorithm does not require initial partitional seeds. The algorithm generates a clustering of a given set of data through the embedding of the high-dimensional data items on a two-dimensional grid for easy clustering result retrieval and visualization. Inspired by the self-organized behavior of bird flocks, we represent each document object with a flock boid. The simple local rules followed by each flock boid result in the entire document flock generating complex global behaviors, which eventually result in a clustering of the documents. We evaluate the efficiency of our algorithm with both a synthetic dataset and a real document collection that includes 100 news articles collected from the Internet. Our results show that the Flocking clustering algorithm achieves better performance compared to the K- means and the Ant clustering algorithm for real document clustering.

  7. Mining the National Career Assessment Examination Result Using Clustering Algorithm

    Science.gov (United States)

    Pagudpud, M. V.; Palaoag, T. T.; Padirayon, L. M.

    2018-03-01

    Education is an essential process today which elicits authorities to discover and establish innovative strategies for educational improvement. This study applied data mining using clustering technique for knowledge extraction from the National Career Assessment Examination (NCAE) result in the Division of Quirino. The NCAE is an examination given to all grade 9 students in the Philippines to assess their aptitudes in the different domains. Clustering the students is helpful in identifying students’ learning considerations. With the use of the RapidMiner tool, clustering algorithms such as Density-Based Spatial Clustering of Applications with Noise (DBSCAN), k-means, k-medoid, expectation maximization clustering, and support vector clustering algorithms were analyzed. The silhouette indexes of the said clustering algorithms were compared, and the result showed that the k-means algorithm with k = 3 and silhouette index equal to 0.196 is the most appropriate clustering algorithm to group the students. Three groups were formed having 477 students in the determined group (cluster 0), 310 proficient students (cluster 1) and 396 developing students (cluster 2). The data mining technique used in this study is essential in extracting useful information from the NCAE result to better understand the abilities of students which in turn is a good basis for adopting teaching strategies.

  8. A novel hybrid clustering algorithm for microblog topic detection

    Science.gov (United States)

    Geng, Xiao; Zhang, Yanmei; Jiao, Yuhang; Mei, Yinan

    2017-10-01

    Microblog has the characteristics of large scale, various topics and too much topic-unrelated texts included. So we propose a three -layer hybrid clustering algorithm to replace the original ones used in the topic detection models which can hardly handle microblog. We apply the K-means algorithm in clustering the microblog texts by their topics in the first layer. And in the second layer, we use the agglomerative nesting algorithm to merge the small clusters consisting of texts of the same topic. The first two layers also remove most noise, reducing their further impact on the K-means in the third layer, which reassigns the texts assigned to the wrong cluster. Experiments show our algorithm outperforms some related traditional algorithms on the clustering of real dataset and functions perfectly in the topic detection.

  9. Android Malware Classification Using K-Means Clustering Algorithm

    Science.gov (United States)

    Hamid, Isredza Rahmi A.; Syafiqah Khalid, Nur; Azma Abdullah, Nurul; Rahman, Nurul Hidayah Ab; Chai Wen, Chuah

    2017-08-01

    Malware was designed to gain access or damage a computer system without user notice. Besides, attacker exploits malware to commit crime or fraud. This paper proposed Android malware classification approach based on K-Means clustering algorithm. We evaluate the proposed model in terms of accuracy using machine learning algorithms. Two datasets were selected to demonstrate the practicing of K-Means clustering algorithms that are Virus Total and Malgenome dataset. We classify the Android malware into three clusters which are ransomware, scareware and goodware. Nine features were considered for each types of dataset such as Lock Detected, Text Detected, Text Score, Encryption Detected, Threat, Porn, Law, Copyright and Moneypak. We used IBM SPSS Statistic software for data classification and WEKA tools to evaluate the built cluster. The proposed K-Means clustering algorithm shows promising result with high accuracy when tested using Random Forest algorithm.

  10. Dynamic population artificial bee colony algorithm for multi-objective optimal power flow

    Directory of Open Access Journals (Sweden)

    Man Ding

    2017-03-01

    Full Text Available This paper proposes a novel artificial bee colony algorithm with dynamic population (ABC-DP, which synergizes the idea of extended life-cycle evolving model to balance the exploration and exploitation tradeoff. The proposed ABC-DP is a more bee-colony-realistic model that the bee can reproduce and die dynamically throughout the foraging process and population size varies as the algorithm runs. ABC-DP is then used for solving the optimal power flow (OPF problem in power systems that considers the cost, loss, and emission impacts as the objective functions. The 30-bus IEEE test system is presented to illustrate the application of the proposed algorithm. The simulation results, which are also compared to nondominated sorting genetic algorithm II (NSGAII and multi-objective ABC (MOABC, are presented to illustrate the effectiveness and robustness of the proposed method.

  11. Particle Swarm and Bacterial Foraging Inspired Hybrid Artificial Bee Colony Algorithm for Numerical Function Optimization

    Directory of Open Access Journals (Sweden)

    Li Mao

    2016-01-01

    Full Text Available Artificial bee colony (ABC algorithm has good performance in discovering the optimal solutions to difficult optimization problems, but it has weak local search ability and easily plunges into local optimum. In this paper, we introduce the chemotactic behavior of Bacterial Foraging Optimization into employed bees and adopt the principle of moving the particles toward the best solutions in the particle swarm optimization to improve the global search ability of onlooker bees and gain a hybrid artificial bee colony (HABC algorithm. To obtain a global optimal solution efficiently, we make HABC algorithm converge rapidly in the early stages of the search process, and the search range contracts dynamically during the late stages. Our experimental results on 16 benchmark functions of CEC 2014 show that HABC achieves significant improvement at accuracy and convergence rate, compared with the standard ABC, best-so-far ABC, directed ABC, Gaussian ABC, improved ABC, and memetic ABC algorithms.

  12. A Modified Artificial Bee Colony Algorithm for p-Center Problems

    Directory of Open Access Journals (Sweden)

    Alkın Yurtkuran

    2014-01-01

    Full Text Available The objective of the p-center problem is to locate p-centers on a network such that the maximum of the distances from each node to its nearest center is minimized. The artificial bee colony algorithm is a swarm-based meta-heuristic algorithm that mimics the foraging behavior of honey bee colonies. This study proposes a modified ABC algorithm that benefits from a variety of search strategies to balance exploration and exploitation. Moreover, random key-based coding schemes are used to solve the p-center problem effectively. The proposed algorithm is compared to state-of-the-art techniques using different benchmark problems, and computational results reveal that the proposed approach is very efficient.

  13. Performance Evaluation of Incremental K-means Clustering Algorithm

    OpenAIRE

    Chakraborty, Sanjay; Nagwani, N. K.

    2014-01-01

    The incremental K-means clustering algorithm has already been proposed and analysed in paper [Chakraborty and Nagwani, 2011]. It is a very innovative approach which is applicable in periodically incremental environment and dealing with a bulk of updates. In this paper the performance evaluation is done for this incremental K-means clustering algorithm using air pollution database. This paper also describes the comparison on the performance evaluations between existing K-means clustering and i...

  14. Optimization-Based Artificial Bee Colony Algorithm for Data Collection in Large-Scale Mobile Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Yinggao Yue

    2016-01-01

    Full Text Available Data collection is a fundamental operation in various mobile wireless sensor networks (MWSN applications. The energy of nodes around the Sink can be untimely depleted owing to the fact that sensor nodes must transmit vast amounts of data, readily forming a bottleneck in energy consumption; mobile wireless sensor networks have been designed to address this issue. In this study, we focused on a large-scale and intensive MWSN which allows a certain amount of data latency by investigating mobile Sink balance from three aspects: data collection maximization, mobile path length minimization, and network reliability optimization. We also derived a corresponding formula to represent the MWSN and proved that it represents an NP-hard problem. Traditional data collection methods only focus on increasing the amount data collection or reducing the overall network energy consumption, which is why we designed the proposed heuristic algorithm to jointly consider cluster head selection, the routing path from ordinary nodes to the cluster head node, and mobile Sink path planning optimization. The proposed data collection algorithm for mobile Sinks is, in effect, based on artificial bee colony. Simulation results show that, in comparison with other algorithms, the proposed algorithm can effectively reduce data transmission, save energy, improve network data collection efficiency and reliability, and extend the network lifetime.

  15. Probabilistic fuzzy clustering algorithm for fuzzy rules decomposition

    OpenAIRE

    Salgado, Paulo; Igrejas, Getúlio

    2007-01-01

    The Fuzzy C-Means (FCM) clustering algorithm is the best known and the most used method for fuzzy clustering and is generally applied to well defined sets of data. In this work a generalized Probabilistic Fuzzy C-Means (PFCM) algorithm is proposed and applied to fuzzy sets clustering. The methodology presented leads to a fuzzy partition of the fuzzy rules, one for each cluster, which corresponds to a new set of fuzzy sub-systems. When applied to the clustering of a flat fuzzy system the resul...

  16. An event driven algorithm for fractal cluster formation

    NARCIS (Netherlands)

    González, S.; Thornton, Anthony Richard; Luding, Stefan

    2010-01-01

    A new cluster based event-driven algorithm is developed to simulate the formation of clusters in a two dimensional gas: particles move freely until they collide and "stick" together irreversibly. These clusters aggregate into bigger structures in an isotompic way, forming fractal structures whose

  17. An event driven algorithm for fractal cluster formation

    NARCIS (Netherlands)

    González, S.; Gonzalez Briones, Sebastián; Thornton, Anthony Richard; Luding, Stefan

    2011-01-01

    A new cluster based event-driven algorithm is developed to simulate the formation of clusters in a two dimensional gas: particles move freely until they collide and "stick" together irreversibly. These clusters aggregate into bigger structures in an isotompic way, forming fractal structures whose

  18. An event driven algorithm for fractal cluster formation

    OpenAIRE

    González, S.; Thornton, Anthony Richard; Luding, Stefan

    2010-01-01

    A new cluster based event-driven algorithm is developed to simulate the formation of clusters in a two dimensional gas: particles move freely until they collide and "stick" together irreversibly. These clusters aggregate into bigger structures in an isotompic way, forming fractal structures whose fractal dimension depends on the initial density of the system.

  19. Co-clustering models, algorithms and applications

    CERN Document Server

    Govaert, Gérard

    2013-01-01

    Cluster or co-cluster analyses are important tools in a variety of scientific areas. The introduction of this book presents a state of the art of already well-established, as well as more recent methods of co-clustering. The authors mainly deal with the two-mode partitioning under different approaches, but pay particular attention to a probabilistic approach. Chapter 1 concerns clustering in general and the model-based clustering in particular. The authors briefly review the classical clustering methods and focus on the mixture model. They present and discuss the use of different mixture

  20. A new improved artificial bee colony algorithm for ship hull form optimization

    Science.gov (United States)

    Huang, Fuxin; Wang, Lijue; Yang, Chi

    2016-04-01

    The artificial bee colony (ABC) algorithm is a relatively new swarm intelligence-based optimization algorithm. Its simplicity of implementation, relatively few parameter settings and promising optimization capability make it widely used in different fields. However, it has problems of slow convergence due to its solution search equation. Here, a new solution search equation based on a combination of the elite solution pool and the block perturbation scheme is proposed to improve the performance of the algorithm. In addition, two different solution search equations are used by employed bees and onlooker bees to balance the exploration and exploitation of the algorithm. The developed algorithm is validated by a set of well-known numerical benchmark functions. It is then applied to optimize two ship hull forms with minimum resistance. The tested results show that the proposed new improved ABC algorithm can outperform the ABC algorithm in most of the tested problems.

  1. Ant Colony Optimization Approaches to Clustering of Lung Nodules from CT Images

    Directory of Open Access Journals (Sweden)

    Ravichandran C. Gopalakrishnan

    2014-01-01

    Full Text Available Lung cancer is becoming a threat to mankind. Applying machine learning algorithms for detection and segmentation of irregular shaped lung nodules remains a remarkable milestone in CT scan image analysis research. In this paper, we apply ACO algorithm for lung nodule detection. We have compared the performance against three other algorithms, namely, Otsu algorithm, watershed algorithm, and global region based segmentation. In addition, we suggest a novel approach which involves variations of ACO, namely, refined ACO, logical ACO, and variant ACO. Variant ACO shows better reduction in false positives. In addition we propose black circular neighborhood approach to detect nodule centers from the edge detected image. Genetic algorithm based clustering is performed to cluster the nodules based on intensity, shape, and size. The performance of the overall approach is compared with hierarchical clustering to establish the improvisation in the proposed approach.

  2. Comparison Performance of Genetic Algorithm and Ant Colony Optimization in Course Scheduling Optimizing

    Directory of Open Access Journals (Sweden)

    Imam Ahmad Ashari

    2016-11-01

    Full Text Available Scheduling problems at the university is a complex type of scheduling problems. The scheduling process should be carried out at every turn of the semester's. The core of the problem of scheduling courses at the university is that the number of components that need to be considered in making the schedule, some of the components was made up of students, lecturers, time and a room with due regard to the limits and certain conditions so that no collision in the schedule such as mashed room, mashed lecturer and others. To resolve a scheduling problem most appropriate technique used is the technique of optimization. Optimization techniques can give the best results desired. Metaheuristic algorithm is an algorithm that has a lot of ways to solve the problems to the very limit the optimal solution. In this paper, we use a genetic algorithm and ant colony optimization algorithm is an algorithm metaheuristic to solve the problem of course scheduling. The two algorithm will be tested and compared to get performance is the best. The algorithm was tested using data schedule courses of the university in Semarang. From the experimental results we conclude that the genetic algorithm has better performance than the ant colony optimization  algorithm in solving the case of course scheduling.

  3. Penerapan Bee Colony Optimization Algorithm untuk Penentuan Rute Terpendek (Studi Kasus : Objek Wisata Daerah Istimewa Yogyakarta

    Directory of Open Access Journals (Sweden)

    Danuri Danuri

    2013-01-01

    Abstract The shortest path determination is an optimization problem which often used as a case study for research. Distance is the most defining factor in performing the search paths to be passed. Path with the shortest distance would be chosen as a path selection. Bee colony optimization algorithm used in this study to complete problems shortest path determination. There are two main process es during search path that is forward and backward. Bee colony optimization algorithm works on the process forward. The value probability of a path is base intransition process and the duration of waggle dance track of every bee who had found the position of the goal will be a preferred route. The results obtained in this study is the bee colony optimization algorithm can be used to find shortest path. The number of bees are released greatly affects in finding routes that can be passed. The more the number of bees that removed the greater the chances of finding the shortest path.   Keyword— Shortest Path, Bee Colony Optimization Algorithm

  4. Single-Pass Clustering Algorithm Based on Storm

    Science.gov (United States)

    Fang, LI; Longlong, DAI; Zhiying, JIANG; Shunzi, LI

    2017-02-01

    The dramatically increasing volume of data makes the computational complexity of traditional clustering algorithm rise rapidly accordingly, which leads to the longer time. So as to improve the efficiency of the stream data clustering, a distributed real-time clustering algorithm (S-Single-Pass) based on the classic Single-Pass [1] algorithm and Storm [2] computation framework was designed in this paper. By employing this kind of method in the Topic Detection and Tracking (TDT) [3], the real-time performance of topic detection arises effectively. The proposed method splits the clustering process into two parts: one part is to form clusters for the multi-thread parallel clustering, the other part is to merge the generated clusters in the previous process and update the global clusters. Through the experimental results, the conclusion can be drawn that the proposed method have the nearly same clustering accuracy as the traditional Single-Pass algorithm and the clustering accuracy remains steady, computing rate increases linearly when increasing the number of cluster machines and nodes (processing threads).

  5. Clustering algorithms for Stokes space modulation format recognition

    DEFF Research Database (Denmark)

    Boada, Ricard; Borkowski, Robert; Tafur Monroy, Idelfonso

    2015-01-01

    influences the performance of the detection process, particularly at low signal-to-noise ratios. This paper reports on an extensive study of six different clustering algorithms: k-means, expectation maximization, density-based DBSCAN and OPTICS, spectral clustering and maximum likelihood clustering, used......Stokes space modulation format recognition (Stokes MFR) is a blind method enabling digital coherent receivers to infer modulation format information directly from a received polarization-division-multiplexed signal. A crucial part of the Stokes MFR is a clustering algorithm, which largely...... for discriminating between dual polarization: BPSK, QPSK, 8-PSK, 8-QAM, and 16-QAM. We determine essential performance metrics for each clustering algorithm and modulation format under test: minimum required signal-to-noise ratio, detection accuracy and algorithm complexity....

  6. Hybrid Artificial Bee Colony Algorithm and Particle Swarm Search for Global Optimization

    Directory of Open Access Journals (Sweden)

    Wang Chun-Feng

    2014-01-01

    Full Text Available Artificial bee colony (ABC algorithm is one of the most recent swarm intelligence based algorithms, which has been shown to be competitive to other population-based algorithms. However, there is still an insufficiency in ABC regarding its solution search equation, which is good at exploration but poor at exploitation. To overcome this problem, we propose a novel artificial bee colony algorithm based on particle swarm search mechanism. In this algorithm, for improving the convergence speed, the initial population is generated by using good point set theory rather than random selection firstly. Secondly, in order to enhance the exploitation ability, the employed bee, onlookers, and scouts utilize the mechanism of PSO to search new candidate solutions. Finally, for further improving the searching ability, the chaotic search operator is adopted in the best solution of the current iteration. Our algorithm is tested on some well-known benchmark functions and compared with other algorithms. Results show that our algorithm has good performance.

  7. A novel clustering algorithm based on quantum games

    International Nuclear Information System (INIS)

    Li Qiang; He Yan; Jiang Jingping

    2009-01-01

    Enormous successes have been made by quantum algorithms during the last decade. In this paper, we combine the quantum game with the problem of data clustering, and then develop a quantum-game-based clustering algorithm, in which data points in a dataset are considered as players who can make decisions and implement quantum strategies in quantum games. After each round of a quantum game, each player's expected payoff is calculated. Later, he uses a link-removing-and-rewiring (LRR) function to change his neighbors and adjust the strength of links connecting to them in order to maximize his payoff. Further, algorithms are discussed and analyzed in two cases of strategies, two payoff matrixes and two LRR functions. Consequently, the simulation results have demonstrated that data points in datasets are clustered reasonably and efficiently, and the clustering algorithms have fast rates of convergence. Moreover, the comparison with other algorithms also provides an indication of the effectiveness of the proposed approach.

  8. Random Walk Quantum Clustering Algorithm Based on Space

    Science.gov (United States)

    Xiao, Shufen; Dong, Yumin; Ma, Hongyang

    2018-01-01

    In the random quantum walk, which is a quantum simulation of the classical walk, data points interacted when selecting the appropriate walk strategy by taking advantage of quantum-entanglement features; thus, the results obtained when the quantum walk is used are different from those when the classical walk is adopted. A new quantum walk clustering algorithm based on space is proposed by applying the quantum walk to clustering analysis. In this algorithm, data points are viewed as walking participants, and similar data points are clustered using the walk function in the pay-off matrix according to a certain rule. The walk process is simplified by implementing a space-combining rule. The proposed algorithm is validated by a simulation test and is proved superior to existing clustering algorithms, namely, Kmeans, PCA + Kmeans, and LDA-Km. The effects of some of the parameters in the proposed algorithm on its performance are also analyzed and discussed. Specific suggestions are provided.

  9. A Multiuser Detector Based on Artificial Bee Colony Algorithm for DS-UWB Systems

    Directory of Open Access Journals (Sweden)

    Zhendong Yin

    2013-01-01

    Full Text Available Artificial Bee Colony (ABC algorithm is an optimization algorithm based on the intelligent behavior of honey bee swarm. The ABC algorithm was developed to solve optimizing numerical problems and revealed premising results in processing time and solution quality. In ABC, a colony of artificial bees search for rich artificial food sources; the optimizing numerical problems are converted to the problem of finding the best parameter which minimizes an objective function. Then, the artificial bees randomly discover a population of initial solutions and then iteratively improve them by employing the behavior: moving towards better solutions by means of a neighbor search mechanism while abandoning poor solutions. In this paper, an efficient multiuser detector based on a suboptimal code mapping multiuser detector and artificial bee colony algorithm (SCM-ABC-MUD is proposed and implemented in direct-sequence ultra-wideband (DS-UWB systems under the additive white Gaussian noise (AWGN channel. The simulation results demonstrate that the BER and the near-far effect resistance performances of this proposed algorithm are quite close to those of the optimum multiuser detector (OMD while its computational complexity is much lower than that of OMD. Furthermore, the BER performance of SCM-ABC-MUD is not sensitive to the number of active users and can obtain a large system capacity.

  10. Optimization of type-2 fuzzy controllers using the bee colony algorithm

    CERN Document Server

    Amador, Leticia

    2017-01-01

    This book focuses on the fields of fuzzy logic, bio-inspired algorithm; especially bee colony optimization algorithm and also considering the fuzzy control area. The main idea is that this areas together can to solve various control problems and to find better results. In this book we test the proposed method using two benchmark problems; the problem for filling a water tank and the problem for controlling the trajectory in an autonomous mobile robot. When Interval Type-2 Fuzzy Logic System is implemented to model the behavior of systems, the results show a better stabilization, because the analysis of uncertainty is better. For this reason we consider in this book the proposed method using fuzzy systems, fuzzy controllers, and bee colony optimization algorithm improve the behavior of the complex control problems.

  11. Three-dimensional Path Planning for Underwater Vehicles Based on an Improved Ant Colony Optimization Algorithm

    Directory of Open Access Journals (Sweden)

    L.Yang

    2015-12-01

    Full Text Available Three-dimensional path planning for underwater vehicles is an important problem that focuses on optimizing the route with consideration of various constraints in a complex underwater environment. In this paper, an improved ant colony optimization (IACO algorithm based on pheromone exclusion is proposed to solve the underwater vehicle 3D path planning problem. The IACO algorithm can balance the tasks of exploration and development in the ant search path, and enable the ants in the search process to explore initially and develop subsequently. Then, the underwater vehicle can find the safe path by connecting the chosen nodes of the 3D mesh while avoiding the threat area. This new approach can overcome common disadvantages of the basic ant colony algorithm, such as falling into local extremum, poor quality, and low accuracy. Experimental comparative results demonstrate that this proposed IACO method is more effective and feasible in underwater vehicle 3D path planning than the basic ACO model.

  12. Double evolutsional artificial bee colony algorithm for multiple traveling salesman problem

    Directory of Open Access Journals (Sweden)

    Xue Ming Hao

    2016-01-01

    Full Text Available The double evolutional artificial bee colony algorithm (DEABC is proposed for solving the single depot multiple traveling salesman problem (MTSP. The proposed DEABC algorithm, which takes advantage of the strength of the upgraded operators, is characterized by its guidance in exploitation search and diversity in exploration search. The double evolutional process for exploitation search is composed of two phases of half stochastic optimal search, and the diversity generating operator for exploration search is used for solutions which cannot be improved after limited times. The computational results demonstrated the superiority of our algorithm over previous state-of-the-art methods.

  13. Alpha-cut implemented fuzzy clustering algorithms and switching regressions.

    Science.gov (United States)

    Yang, Miin-Shen; Wu, Kuo-Lung; Hsieh, June-Nan; Yu, Jian

    2008-06-01

    In the fuzzy c-means (FCM) clustering algorithm, almost none of the data points have a membership value of 1. Moreover, noise and outliers may cause difficulties in obtaining appropriate clustering results from the FCM algorithm. The embedding of FCM into switching regressions, called the fuzzy c-regressions (FCRs), still has the same drawbacks as FCM. In this paper, we propose the alpha-cut implemented fuzzy clustering algorithms, referred to as FCMalpha, which allow the data points being able to completely belong to one cluster. The proposed FCMalpha algorithms can form a cluster core for each cluster, where data points inside a cluster core will have a membership value of 1 so that it can resolve the drawbacks of FCM. On the other hand, the fuzziness index m plays different roles for FCM and FCMalpha. We find that the clustering results obtained by FCMalpha are more robust to noise and outliers than FCM when a larger m is used. Moreover, the cluster cores generated by FCMalpha are workable for various data shape clusters, so that FCMalpha is very suitable for embedding into switching regressions. The embedding of FCMalpha into switching regressions is called FCRalpha. The proposed FCRalpha provides better results than FCR for environments with noise or outliers. Numerical examples show the robustness and the superiority of our proposed methods.

  14. Modification of MSDR algorithm and ITS implementation on graph clustering

    Science.gov (United States)

    Prastiwi, D.; Sugeng, K. A.; Siswantining, T.

    2017-07-01

    Maximum Standard Deviation Reduction (MSDR) is a graph clustering algorithm to minimize the distance variation within a cluster. In this paper we propose a modified MSDR by replacing one technical step in MSDR which uses polynomial regression, with a new and simpler step. This leads to our new algorithm called Modified MSDR (MMSDR). We implement the new algorithm to separate a domestic flight network of an Indonesian airline into two large clusters. Further analysis allows us to discover a weak link in the network, which should be improved by adding more flights.

  15. Optimum Design of Power System Stabilizer based on Improved Ant Colony Optimization Algorithm

    Directory of Open Access Journals (Sweden)

    Ruba AL-MulaHumadi

    2018-01-01

    Full Text Available This paper presents an improved technique on Ant Colony Optimization (ACO algorithm. The procedure is applied on Single Machine with Infinite Bus (SMIB system with power system stabilizer (PSS at three different loading regimes. The simulations are made by using MATLAB software. The results show that by using Improved Ant Colony Optimization (IACO the system will give better performance with less number of iterations as it compared with a previous modification on ACO. In addition, the probability of selecting the arc depends on the best ant performance and the evaporation rate.

  16. Improved multi-objective clustering algorithm using particle swarm optimization.

    Directory of Open Access Journals (Sweden)

    Congcong Gong

    Full Text Available Multi-objective clustering has received widespread attention recently, as it can obtain more accurate and reasonable solution. In this paper, an improved multi-objective clustering framework using particle swarm optimization (IMCPSO is proposed. Firstly, a novel particle representation for clustering problem is designed to help PSO search clustering solutions in continuous space. Secondly, the distribution of Pareto set is analyzed. The analysis results are applied to the leader selection strategy, and make algorithm avoid trapping in local optimum. Moreover, a clustering solution-improved method is proposed, which can increase the efficiency in searching clustering solution greatly. In the experiments, 28 datasets are used and nine state-of-the-art clustering algorithms are compared, the proposed method is superior to other approaches in the evaluation index ARI.

  17. A fuzzy co-clustering algorithm for biomedical data.

    Science.gov (United States)

    Liu, Yongli; Wu, Shuai; Liu, Zhizhong; Chao, Hao

    2017-01-01

    Fuzzy co-clustering extends co-clustering by assigning membership functions to both the objects and the features, and is helpful to improve clustering accurarcy of biomedical data. In this paper, we introduce a new fuzzy co-clustering algorithm based on information bottleneck named ibFCC. The ibFCC formulates an objective function which includes a distance function that employs information bottleneck theory to measure the distance between feature data point and the feature cluster centroid. Many experiments were conducted on five biomedical datasets, and the ibFCC was compared with such prominent fuzzy (co-)clustering algorithms as FCM, FCCM, RFCC and FCCI. Experimental results showed that ibFCC could yield high quality clusters and was better than all these methods in terms of accuracy.

  18. Using k-means++ algorithm for researchers clustering

    Science.gov (United States)

    Rukmi, Alvida Mustika; Iqbal, Ikhwan Muhammad

    2017-08-01

    The Clustering of researchers based on publications is one of identifying community of researchers in a research environment. The researchers will know the relationships with other researchers regarding the similarity of topics and disciplines of publications based on the research community. The clustering will perform the extraction and analysis of the concept, topic detection and clustering of researchers. The attributes of data that can be obtained through the publications and characteristics of researchers on social networks that have been formed on the relations among researchers. The extraction and analysis of document, has two stages: extraction of keywords using keyphrase automatic rapid extraction (RAKE), and extraction concept of using latent semantic analysis (LSA). Clustering concept use k-means ++ algorithm. The last process, clustering of researchers is formed by feature extraction of social networking analysis,also use the k-means ++ algorithm. Applications for clustering researchers will be presented in the table containing information on researchers in each of these clusters.

  19. A fuzzy clustering algorithm to detect planar and quadric shapes

    Science.gov (United States)

    Krishnapuram, Raghu; Frigui, Hichem; Nasraoui, Olfa

    1992-01-01

    In this paper, we introduce a new fuzzy clustering algorithm to detect an unknown number of planar and quadric shapes in noisy data. The proposed algorithm is computationally and implementationally simple, and it overcomes many of the drawbacks of the existing algorithms that have been proposed for similar tasks. Since the clustering is performed in the original image space, and since no features need to be computed, this approach is particularly suited for sparse data. The algorithm may also be used in pattern recognition applications.

  20. Parallel clustering algorithm for large-scale biological data sets.

    Science.gov (United States)

    Wang, Minchao; Zhang, Wu; Ding, Wang; Dai, Dongbo; Zhang, Huiran; Xie, Hao; Chen, Luonan; Guo, Yike; Xie, Jiang

    2014-01-01

    Recent explosion of biological data brings a great challenge for the traditional clustering algorithms. With increasing scale of data sets, much larger memory and longer runtime are required for the cluster identification problems. The affinity propagation algorithm outperforms many other classical clustering algorithms and is widely applied into the biological researches. However, the time and space complexity become a great bottleneck when handling the large-scale data sets. Moreover, the similarity matrix, whose constructing procedure takes long runtime, is required before running the affinity propagation algorithm, since the algorithm clusters data sets based on the similarities between data pairs. Two types of parallel architectures are proposed in this paper to accelerate the similarity matrix constructing procedure and the affinity propagation algorithm. The memory-shared architecture is used to construct the similarity matrix, and the distributed system is taken for the affinity propagation algorithm, because of its large memory size and great computing capacity. An appropriate way of data partition and reduction is designed in our method, in order to minimize the global communication cost among processes. A speedup of 100 is gained with 128 cores. The runtime is reduced from serval hours to a few seconds, which indicates that parallel algorithm is capable of handling large-scale data sets effectively. The parallel affinity propagation also achieves a good performance when clustering large-scale gene data (microarray) and detecting families in large protein superfamilies.

  1. A robust fuzzy local information C-Means clustering algorithm.

    Science.gov (United States)

    Krinidis, Stelios; Chatzis, Vassilios

    2010-05-01

    This paper presents a variation of fuzzy c-means (FCM) algorithm that provides image clustering. The proposed algorithm incorporates the local spatial information and gray level information in a novel fuzzy way. The new algorithm is called fuzzy local information C-Means (FLICM). FLICM can overcome the disadvantages of the known fuzzy c-means algorithms and at the same time enhances the clustering performance. The major characteristic of FLICM is the use of a fuzzy local (both spatial and gray level) similarity measure, aiming to guarantee noise insensitiveness and image detail preservation. Furthermore, the proposed algorithm is fully free of the empirically adjusted parameters (a, ¿(g), ¿(s), etc.) incorporated into all other fuzzy c-means algorithms proposed in the literature. Experiments performed on synthetic and real-world images show that FLICM algorithm is effective and efficient, providing robustness to noisy images.

  2. An AK-LDMeans algorithm based on image clustering

    Science.gov (United States)

    Chen, Huimin; Li, Xingwei; Zhang, Yongbin; Chen, Nan

    2018-03-01

    Clustering is an effective analytical technique for handling unmarked data for value mining. Its ultimate goal is to mark unclassified data quickly and correctly. We use the roadmap for the current image processing as the experimental background. In this paper, we propose an AK-LDMeans algorithm to automatically lock the K value by designing the Kcost fold line, and then use the long-distance high-density method to select the clustering centers to further replace the traditional initial clustering center selection method, which further improves the efficiency and accuracy of the traditional K-Means Algorithm. And the experimental results are compared with the current clustering algorithm and the results are obtained. The algorithm can provide effective reference value in the fields of image processing, machine vision and data mining.

  3. Cooperative path planning for multi-USV based on improved artificial bee colony algorithm

    Science.gov (United States)

    Cao, Lu; Chen, Qiwei

    2018-03-01

    Due to the complex constraints, more uncertain factors and critical real-time demand of path planning for multiple unmanned surface vehicle (multi-USV), an improved artificial bee colony (I-ABC) algorithm were proposed to solve the model of cooperative path planning for multi-USV. First the Voronoi diagram of battle field space is conceived to generate the optimal area of USVs paths. Then the chaotic searching algorithm is used to initialize the collection of paths, which is regard as foods of the ABC algorithm. With the limited data, the initial collection can search the optimal area of paths perfectly. Finally simulations of the multi-USV path planning under various threats have been carried out. Simulation results verify that the I-ABC algorithm can improve the diversity of nectar source and the convergence rate of algorithm. It can increase the adaptability of dynamic battlefield and unexpected threats for USV.

  4. Using an Improved Artificial Bee Colony Algorithm for Parameter Estimation of a Dynamic Grain Flow Model

    Directory of Open Access Journals (Sweden)

    He Wang

    2018-01-01

    Full Text Available An effective method is proposed to estimate the parameters of a dynamic grain flow model (DGFM. To this end, an improved artificial bee colony (IABC algorithm is used to estimate unknown parameters of DGFM with minimizing a given objective function. A comparative study of the performance of the IABC algorithm and the other ABC variants on several benchmark functions is carried out, and the results present a significant improvement in performance over the other ABC variants. The practical application performance of the IABC is compared to that of the nonlinear least squares (NLS, particle swarm optimization (PSO, and genetic algorithm (GA. The compared results demonstrate that IABC algorithm is more accurate and effective for the parameter estimation of DGFM than the other algorithms.

  5. Analysis of parameter estimation and optimization application of ant colony algorithm in vehicle routing problem

    Science.gov (United States)

    Xu, Quan-Li; Cao, Yu-Wei; Yang, Kun

    2018-03-01

    Ant Colony Optimization (ACO) is the most widely used artificial intelligence algorithm at present. This study introduced the principle and mathematical model of ACO algorithm in solving Vehicle Routing Problem (VRP), and designed a vehicle routing optimization model based on ACO, then the vehicle routing optimization simulation system was developed by using c ++ programming language, and the sensitivity analyses, estimations and improvements of the three key parameters of ACO were carried out. The results indicated that the ACO algorithm designed in this paper can efficiently solve rational planning and optimization of VRP, and the different values of the key parameters have significant influence on the performance and optimization effects of the algorithm, and the improved algorithm is not easy to locally converge prematurely and has good robustness.

  6. A new hybrid imperialist competitive algorithm on data clustering

    Indian Academy of Sciences (India)

    Data clustering algorithms can be divided into hierarchical or partitional. In this paper, we .... where X denotes the input data vector, Y denotes the centroid vector of cluster, n subscripts the number of ...... Morales A K, Erazo F R 2009 A search space reduction methodology for data mining in large data bases. Engineering ...

  7. Exact Algorithms for the Clustered Vehicle Routing Problem

    NARCIS (Netherlands)

    Battarra, M.; Erdogan, G.; Vigo, D.

    2014-01-01

    This study presents new exact algorithms for the clustered vehicle routing problem (CluVRP). The CluVRP is a generalization of the capacitated vehicle routing problem (CVRP), in which the customers are grouped into clusters. As in the CVRP, all the customers must be visited exactly once, but a

  8. Efficient Record Linkage Algorithms Using Complete Linkage Clustering

    Science.gov (United States)

    Mamun, Abdullah-Al; Aseltine, Robert; Rajasekaran, Sanguthevar

    2016-01-01

    Data from different agencies share data of the same individuals. Linking these datasets to identify all the records belonging to the same individuals is a crucial and challenging problem, especially given the large volumes of data. A large number of available algorithms for record linkage are prone to either time inefficiency or low-accuracy in finding matches and non-matches among the records. In this paper we propose efficient as well as reliable sequential and parallel algorithms for the record linkage problem employing hierarchical clustering methods. We employ complete linkage hierarchical clustering algorithms to address this problem. In addition to hierarchical clustering, we also use two other techniques: elimination of duplicate records and blocking. Our algorithms use sorting as a sub-routine to identify identical copies of records. We have tested our algorithms on datasets with millions of synthetic records. Experimental results show that our algorithms achieve nearly 100% accuracy. Parallel implementations achieve almost linear speedups. Time complexities of these algorithms do not exceed those of previous best-known algorithms. Our proposed algorithms outperform previous best-known algorithms in terms of accuracy consuming reasonable run times. PMID:27124604

  9. Efficient Record Linkage Algorithms Using Complete Linkage Clustering.

    Science.gov (United States)

    Mamun, Abdullah-Al; Aseltine, Robert; Rajasekaran, Sanguthevar

    2016-01-01

    Data from different agencies share data of the same individuals. Linking these datasets to identify all the records belonging to the same individuals is a crucial and challenging problem, especially given the large volumes of data. A large number of available algorithms for record linkage are prone to either time inefficiency or low-accuracy in finding matches and non-matches among the records. In this paper we propose efficient as well as reliable sequential and parallel algorithms for the record linkage problem employing hierarchical clustering methods. We employ complete linkage hierarchical clustering algorithms to address this problem. In addition to hierarchical clustering, we also use two other techniques: elimination of duplicate records and blocking. Our algorithms use sorting as a sub-routine to identify identical copies of records. We have tested our algorithms on datasets with millions of synthetic records. Experimental results show that our algorithms achieve nearly 100% accuracy. Parallel implementations achieve almost linear speedups. Time complexities of these algorithms do not exceed those of previous best-known algorithms. Our proposed algorithms outperform previous best-known algorithms in terms of accuracy consuming reasonable run times.

  10. Robust Kernel Clustering Algorithm for Nonlinear System Identification

    Directory of Open Access Journals (Sweden)

    Mohamed Bouzbida

    2017-01-01

    Full Text Available In engineering field, it is necessary to know the model of the real nonlinear systems to ensure its control and supervision; in this context, fuzzy modeling and especially the Takagi-Sugeno fuzzy model has drawn the attention of several researchers in recent decades owing to their potential to approximate nonlinear behavior. To identify the parameters of Takagi-Sugeno fuzzy model several clustering algorithms are developed such as the Fuzzy C-Means (FCM algorithm, Possibilistic C-Means (PCM algorithm, and Possibilistic Fuzzy C-Means (PFCM algorithm. This paper presents a new clustering algorithm for Takagi-Sugeno fuzzy model identification. Our proposed algorithm called Robust Kernel Possibilistic Fuzzy C-Means (RKPFCM algorithm is an extension of the PFCM algorithm based on kernel method, where the Euclidean distance used the robust hyper tangent kernel function. The proposed algorithm can solve the nonlinear separable problems found by FCM, PCM, and PFCM algorithms. Then an optimization method using the Particle Swarm Optimization (PSO method combined with the RKPFCM algorithm is presented to overcome the convergence to a local minimum of the objective function. Finally, validation results of examples are given to demonstrate the effectiveness, practicality, and robustness of our proposed algorithm in stochastic environment.

  11. Image Registration Algorithm Based on Parallax Constraint and Clustering Analysis

    Science.gov (United States)

    Wang, Zhe; Dong, Min; Mu, Xiaomin; Wang, Song

    2018-01-01

    To resolve the problem of slow computation speed and low matching accuracy in image registration, a new image registration algorithm based on parallax constraint and clustering analysis is proposed. Firstly, Harris corner detection algorithm is used to extract the feature points of two images. Secondly, use Normalized Cross Correlation (NCC) function to perform the approximate matching of feature points, and the initial feature pair is obtained. Then, according to the parallax constraint condition, the initial feature pair is preprocessed by K-means clustering algorithm, which is used to remove the feature point pairs with obvious errors in the approximate matching process. Finally, adopt Random Sample Consensus (RANSAC) algorithm to optimize the feature points to obtain the final feature point matching result, and the fast and accurate image registration is realized. The experimental results show that the image registration algorithm proposed in this paper can improve the accuracy of the image matching while ensuring the real-time performance of the algorithm.

  12. Optimization of China Crude Oil Transportation Network with Genetic Ant Colony Algorithm

    Directory of Open Access Journals (Sweden)

    Yao Wang

    2015-08-01

    Full Text Available Taking into consideration both shipping and pipeline transport, this paper first analysed the risk factors for different modes of crude oil import transportation. Then, based on the minimum of both transportation cost and overall risk, a multi-objective programming model was established to optimize the transportation network of crude oil import, and the genetic algorithm and ant colony algorithm were employed to solve the problem. The optimized result shows that VLCC (Very Large Crude Carrier is superior in long distance sea transportation, whereas pipeline transport is more secure than sea transport. Finally, this paper provides related safeguard suggestions on crude oil import transportation.

  13. Novel PID Tracking Controller for 2DOF Robotic Manipulator System Based on Artificial Bee Colony Algorithm

    Directory of Open Access Journals (Sweden)

    Elkhateeb Nasr A.

    2017-12-01

    Full Text Available This study presents a well-developed optimization methodology based on the dynamic inertia weight Artificial Bee Colony algorithm (ABC to design an optimal PID controller for a robotic arm manipulator. The dynamical analysis of robotic arm manipulators investigates a coupling relation between the joint torques applied by the actuators and the position and acceleration of the robot arm. An optimal PID control law is obtained from the proposed (ABC algorithm and applied to the robotic system. The designed controller optimizes the trajectory of the robot’s end effector for a time-variant input and makes the robot robust in the presence of external disturbance.

  14. A Modified Artificial Bee Colony Algorithm Application for Economic Environmental Dispatch

    Science.gov (United States)

    Tarafdar Hagh, M.; Baghban Orandi, Omid

    2018-03-01

    In conventional fossil-fuel power systems, the economic environmental dispatch (EED) problem is a major problem that optimally determines the output power of generating units in a way that cost of total production and emission level be minimized simultaneously, and at the same time all the constraints of units and system are satisfied properly. To solve EED problem which is a non-convex optimization problem, a modified artificial bee colony (MABC) algorithm is proposed in this paper. This algorithm by implementing weighted sum method is applied on two test systems, and eventually, obtained results are compared with other reported results. Comparison of results confirms superiority and efficiency of proposed method clearly.

  15. A New Modified Artificial Bee Colony Algorithm with Exponential Function Adaptive Steps

    Science.gov (United States)

    Mao, Wei; Li, Hao-ru

    2016-01-01

    As one of the most recent popular swarm intelligence techniques, artificial bee colony algorithm is poor at exploitation and has some defects such as slow search speed, poor population diversity, the stagnation in the working process, and being trapped into the local optimal solution. The purpose of this paper is to develop a new modified artificial bee colony algorithm in view of the initial population structure, subpopulation groups, step updating, and population elimination. Further, depending on opposition-based learning theory and the new modified algorithms, an improved S-type grouping method is proposed and the original way of roulette wheel selection is substituted through sensitivity-pheromone way. Then, an adaptive step with exponential functions is designed for replacing the original random step. Finally, based on the new test function versions CEC13, six benchmark functions with the dimensions D = 20 and D = 40 are chosen and applied in the experiments for analyzing and comparing the iteration speed and accuracy of the new modified algorithms. The experimental results show that the new modified algorithm has faster and more stable searching and can quickly increase poor population diversity and bring out the global optimal solutions. PMID:27293426

  16. A New Modified Artificial Bee Colony Algorithm with Exponential Function Adaptive Steps.

    Science.gov (United States)

    Mao, Wei; Lan, Heng-You; Li, Hao-Ru

    2016-01-01

    As one of the most recent popular swarm intelligence techniques, artificial bee colony algorithm is poor at exploitation and has some defects such as slow search speed, poor population diversity, the stagnation in the working process, and being trapped into the local optimal solution. The purpose of this paper is to develop a new modified artificial bee colony algorithm in view of the initial population structure, subpopulation groups, step updating, and population elimination. Further, depending on opposition-based learning theory and the new modified algorithms, an improved S-type grouping method is proposed and the original way of roulette wheel selection is substituted through sensitivity-pheromone way. Then, an adaptive step with exponential functions is designed for replacing the original random step. Finally, based on the new test function versions CEC13, six benchmark functions with the dimensions D = 20 and D = 40 are chosen and applied in the experiments for analyzing and comparing the iteration speed and accuracy of the new modified algorithms. The experimental results show that the new modified algorithm has faster and more stable searching and can quickly increase poor population diversity and bring out the global optimal solutions.

  17. A New Modified Artificial Bee Colony Algorithm with Exponential Function Adaptive Steps

    Directory of Open Access Journals (Sweden)

    Wei Mao

    2016-01-01

    Full Text Available As one of the most recent popular swarm intelligence techniques, artificial bee colony algorithm is poor at exploitation and has some defects such as slow search speed, poor population diversity, the stagnation in the working process, and being trapped into the local optimal solution. The purpose of this paper is to develop a new modified artificial bee colony algorithm in view of the initial population structure, subpopulation groups, step updating, and population elimination. Further, depending on opposition-based learning theory and the new modified algorithms, an improved S-type grouping method is proposed and the original way of roulette wheel selection is substituted through sensitivity-pheromone way. Then, an adaptive step with exponential functions is designed for replacing the original random step. Finally, based on the new test function versions CEC13, six benchmark functions with the dimensions D=20 and D=40 are chosen and applied in the experiments for analyzing and comparing the iteration speed and accuracy of the new modified algorithms. The experimental results show that the new modified algorithm has faster and more stable searching and can quickly increase poor population diversity and bring out the global optimal solutions.

  18. An Improved Multi-Objective Artificial Bee Colony Optimization Algorithm with Regulation Operators

    Directory of Open Access Journals (Sweden)

    Jiuyuan Huo

    2017-02-01

    Full Text Available To achieve effective and accurate optimization for multi-objective optimization problems, a multi-objective artificial bee colony algorithm with regulation operators (RMOABC inspired by the intelligent foraging behavior of honey bees was proposed in this paper. The proposed algorithm utilizes the Pareto dominance theory and takes advantage of adaptive grid and regulation operator mechanisms. The adaptive grid technique is used to adaptively assess the Pareto front maintained in an external archive and the regulation operator is used to balance the weights of the local search and the global search in the evolution of the algorithm. The performance of RMOABC was evaluated in comparison with other nature inspired algorithms includes NSGA-II and MOEA/D. The experiments results demonstrated that the RMOABC approach has better accuracy and minimal execution time.

  19. A clustering algorithm for determining community structure in complex networks

    Science.gov (United States)

    Jin, Hong; Yu, Wei; Li, ShiJun

    2018-02-01

    Clustering algorithms are attractive for the task of community detection in complex networks. DENCLUE is a representative density based clustering algorithm which has a firm mathematical basis and good clustering properties allowing for arbitrarily shaped clusters in high dimensional datasets. However, this method cannot be directly applied to community discovering due to its inability to deal with network data. Moreover, it requires a careful selection of the density parameter and the noise threshold. To solve these issues, a new community detection method is proposed in this paper. First, we use a spectral analysis technique to map the network data into a low dimensional Euclidean Space which can preserve node structural characteristics. Then, DENCLUE is applied to detect the communities in the network. A mathematical method named Sheather-Jones plug-in is chosen to select the density parameter which can describe the intrinsic clustering structure accurately. Moreover, every node on the network is meaningful so there were no noise nodes as a result the noise threshold can be ignored. We test our algorithm on both benchmark and real-life networks, and the results demonstrate the effectiveness of our algorithm over other popularity density based clustering algorithms adopted to community detection.

  20. Research on retailer data clustering algorithm based on Spark

    Science.gov (United States)

    Huang, Qiuman; Zhou, Feng

    2017-03-01

    Big data analysis is a hot topic in the IT field now. Spark is a high-reliability and high-performance distributed parallel computing framework for big data sets. K-means algorithm is one of the classical partition methods in clustering algorithm. In this paper, we study the k-means clustering algorithm on Spark. Firstly, the principle of the algorithm is analyzed, and then the clustering analysis is carried out on the supermarket customers through the experiment to find out the different shopping patterns. At the same time, this paper proposes the parallelization of k-means algorithm and the distributed computing framework of Spark, and gives the concrete design scheme and implementation scheme. This paper uses the two-year sales data of a supermarket to validate the proposed clustering algorithm and achieve the goal of subdividing customers, and then analyze the clustering results to help enterprises to take different marketing strategies for different customer groups to improve sales performance.

  1. Big Data Clustering Using Genetic Algorithm On Hadoop Mapreduce

    Directory of Open Access Journals (Sweden)

    Nivranshu Hans

    2015-04-01

    Full Text Available Abstract Cluster analysis is used to classify similar objects under same group. It is one of the most important data mining methods. However it fails to perform well for big data due to huge time complexity. For such scenarios parallelization is a better approach. Mapreduce is a popular programming model which enables parallel processing in a distributed environment. But most of the clustering algorithms are not naturally parallelizable for instance Genetic Algorithms. This is so due to the sequential nature of Genetic Algorithms. This paper introduces a technique to parallelize GA based clustering by extending hadoop mapreduce. An analysis of proposed approach to evaluate performance gains with respect to a sequential algorithm is presented. The analysis is based on a real life large data set.

  2. Symmetric nonnegative matrix factorization: algorithms and applications to probabilistic clustering.

    Science.gov (United States)

    He, Zhaoshui; Xie, Shengli; Zdunek, Rafal; Zhou, Guoxu; Cichocki, Andrzej

    2011-12-01

    Nonnegative matrix factorization (NMF) is an unsupervised learning method useful in various applications including image processing and semantic analysis of documents. This paper focuses on symmetric NMF (SNMF), which is a special case of NMF decomposition. Three parallel multiplicative update algorithms using level 3 basic linear algebra subprograms directly are developed for this problem. First, by minimizing the Euclidean distance, a multiplicative update algorithm is proposed, and its convergence under mild conditions is proved. Based on it, we further propose another two fast parallel methods: α-SNMF and β -SNMF algorithms. All of them are easy to implement. These algorithms are applied to probabilistic clustering. We demonstrate their effectiveness for facial image clustering, document categorization, and pattern clustering in gene expression.

  3. GDCluster: A General Decentralized Clustering Algorithm

    NARCIS (Netherlands)

    Mashayekhi, Hoda; Habibi, Jafar; Khalafbeigi, Tania; Voulgaris, Spyros; van Steen, Martinus Richardus

    In many popular applications like peer-to-peer systems, large amounts of data are distributed among multiple sources. Analysis of this data and identifying clusters is challenging due to processing, storage, and transmission costs. In this paper, we propose GDCluster, a general fully decentralized

  4. An Effective Hybrid Routing Algorithm in WSN: Ant Colony Optimization in combination with Hop Count Minimization.

    Science.gov (United States)

    Jiang, Ailian; Zheng, Lihong

    2018-03-29

    Low cost, high reliability and easy maintenance are key criteria in the design of routing protocols for wireless sensor networks (WSNs). This paper investigates the existing ant colony optimization (ACO)-based WSN routing algorithms and the minimum hop count WSN routing algorithms by reviewing their strengths and weaknesses. We also consider the critical factors of WSNs, such as energy constraint of sensor nodes, network load balancing and dynamic network topology. Then we propose a hybrid routing algorithm that integrates ACO and a minimum hop count scheme. The proposed algorithm is able to find the optimal routing path with minimal total energy consumption and balanced energy consumption on each node. The algorithm has unique superiority in terms of searching for the optimal path, balancing the network load and the network topology maintenance. The WSN model and the proposed algorithm have been implemented using C++. Extensive simulation experimental results have shown that our algorithm outperforms several other WSN routing algorithms on such aspects that include the rate of convergence, the success rate in searching for global optimal solution, and the network lifetime.

  5. Simulation study of UAV conflict resolution based on an improved ant colony algorithm

    Directory of Open Access Journals (Sweden)

    Xueli WU

    2018-04-01

    Full Text Available With the gradual opening of the low-altitude airspace and the rapid development of Unmanned Aerial Vehicle(UAV industry, the users of UAV are increasing continuously and the conflicts could occur at any time. It is necessary to develop a reliable UAV conflict resolution algorithm to avoid the danger. This paper proposes an UAV conflict resolution algorithm based on the improved ant colony algorithm with two advantages. Firstly, the algorithm adopts adaptive parameters adjustment strategy, which adjusts the parameters value dynamically according to the quality of the solution, prevents the algorithm premature convergence and improves the accuracy. In addition, the disturbance factors is introduced to the state transition rules of random selected path in order to accelerate the initial convergence. The simulation results have shown that the improved algorithm displays obvious superiority in convergence precision, helping the two UAVs avoiding dangers in time. The algorithm described in this paper could be applied to target identification, path planning and other issues as a general optimized algorithm, which is of great significance and wide application.

  6. Moving Clusters within a Memetic Algorithm for Graph Partitioning

    Directory of Open Access Journals (Sweden)

    Inwook Hwang

    2015-01-01

    Full Text Available Most memetic algorithms (MAs for graph partitioning reduce the cut size of partitions using iterative improvement. But this local process considers one vertex at a time and fails to move clusters between subsets when the movement of any single vertex increases cut size, even though moving the whole cluster would reduce it. A new heuristic identifies clusters from the population of locally optimized random partitions that must anyway be created to seed the MA, and as the MA runs it makes beneficial cluster moves. Results on standard benchmark graphs show significant reductions in cut size, in some cases improving on the best result in the literature.

  7. Sampling Within k-Means Algorithm to Cluster Large Datasets

    Energy Technology Data Exchange (ETDEWEB)

    Bejarano, Jeremy [Brigham Young University; Bose, Koushiki [Brown University; Brannan, Tyler [North Carolina State University; Thomas, Anita [Illinois Institute of Technology; Adragni, Kofi [University of Maryland; Neerchal, Nagaraj [University of Maryland; Ostrouchov, George [ORNL

    2011-08-01

    Due to current data collection technology, our ability to gather data has surpassed our ability to analyze it. In particular, k-means, one of the simplest and fastest clustering algorithms, is ill-equipped to handle extremely large datasets on even the most powerful machines. Our new algorithm uses a sample from a dataset to decrease runtime by reducing the amount of data analyzed. We perform a simulation study to compare our sampling based k-means to the standard k-means algorithm by analyzing both the speed and accuracy of the two methods. Results show that our algorithm is significantly more efficient than the existing algorithm with comparable accuracy. Further work on this project might include a more comprehensive study both on more varied test datasets as well as on real weather datasets. This is especially important considering that this preliminary study was performed on rather tame datasets. Also, these datasets should analyze the performance of the algorithm on varied values of k. Lastly, this paper showed that the algorithm was accurate for relatively low sample sizes. We would like to analyze this further to see how accurate the algorithm is for even lower sample sizes. We could find the lowest sample sizes, by manipulating width and confidence level, for which the algorithm would be acceptably accurate. In order for our algorithm to be a success, it needs to meet two benchmarks: match the accuracy of the standard k-means algorithm and significantly reduce runtime. Both goals are accomplished for all six datasets analyzed. However, on datasets of three and four dimension, as the data becomes more difficult to cluster, both algorithms fail to obtain the correct classifications on some trials. Nevertheless, our algorithm consistently matches the performance of the standard algorithm while becoming remarkably more efficient with time. Therefore, we conclude that analysts can use our algorithm, expecting accurate results in considerably less time.

  8. Identifying nuclear power plant transients using the Discrete Binary Artificial Bee Colony (DBABC) algorithm

    International Nuclear Information System (INIS)

    Oliveira, Iona M.S. de; Schirru, Roberto

    2011-01-01

    The identification of possible transients in a nuclear power plant is a highly relevant problem. This is mainly due to the fact that the operation of a nuclear power plant involves a large number of state variables whose behaviors are extremely dynamic. In risk situations, besides the huge cognitive overload that operators are submitted to, there is also the problem related with the considerable decrease in the effective time for correct decision making. To minimize these problems and help operators to make the corrective actions in due time, this paper presents a new contribution in this area and introduces an experimental transient identification system based exclusively on the abilities of the Discrete Binary Artificial Bee Colony (DBABC) algorithm to find the best centroid positions that correctly identifies a transient in a nuclear power plant. The DBABC is a reworking of the Artificial Bee Colony (ABC) algorithm which presents the advantage of operating in both continuous and discrete search spaces. Through the analysis of experimental results, the effective performance of the proposed DBABC algorithm is shown against some well known best performing algorithms from the literature. (author)

  9. A Genetic Algorithm That Exchanges Neighboring Centers for Fuzzy c-Means Clustering

    Science.gov (United States)

    Chahine, Firas Safwan

    2012-01-01

    Clustering algorithms are widely used in pattern recognition and data mining applications. Due to their computational efficiency, partitional clustering algorithms are better suited for applications with large datasets than hierarchical clustering algorithms. K-means is among the most popular partitional clustering algorithm, but has a major…

  10. Flame Image Segmentation Based on the Bee Colony Algorithm with Characteristics of Levy Flights

    Directory of Open Access Journals (Sweden)

    Xiaolin Zhang

    2015-01-01

    Full Text Available The real-time processing of the image segmentation method with accuracy is very important in the application of the flame image detection system. This paper considers a novel method for flame image segmentation. It is the bee colony algorithm with characteristics enhancement of Levy flights against the problems of the algorithm during segmentation, including long calculation time and poor stability. By introducing the idea of Levy flights, this method designs a new local search strategy. By setting the current optimal value and based on the collaboration between the populations, it reinforces the overall convergence speed. By adopting the new fitness evaluation method and combining it with the two-dimensional entropy multithreshold segmentation principle, this paper develops a threshold segmentation test of the flame image. Test results show that this method has some advantages in terms of accuracy of threshold selection and calculation time. The robustness of the algorithm meets the actual demands in the engineering application.

  11. Heuristic Artificial Bee Colony Algorithm for Uncovering Community in Complex Networks

    Directory of Open Access Journals (Sweden)

    Yuquan Guo

    2017-01-01

    Full Text Available Community structure is important for us to understand the functions and structure of the complex networks. In this paper, Heuristic Artificial Bee Colony (HABC algorithm based on swarm intelligence is proposed for uncovering community. The proposed HABC includes initialization, employed bee searching, onlooker searching, and scout bee searching. In initialization stage, the nectar sources with simple community structure are generated through network dynamic algorithm associated with complete subgraph. In employed bee searching and onlooker searching stages, the searching function is redefined to address the community problem. The efficiency of searching progress can be improved by a heuristic function which is an average agglomerate probability of two neighbor communities. Experiments are carried out on artificial and real world networks, and the results demonstrate that HABC will have better performance in terms of comparing with the state-of-the-art algorithms.

  12. AN IMPROVED FUZZY CLUSTERING ALGORITHM FOR MICROARRAY IMAGE SPOTS SEGMENTATION

    Directory of Open Access Journals (Sweden)

    V.G. Biju

    2015-11-01

    Full Text Available An automatic cDNA microarray image processing using an improved fuzzy clustering algorithm is presented in this paper. The spot segmentation algorithm proposed uses the gridding technique developed by the authors earlier, for finding the co-ordinates of each spot in an image. Automatic cropping of spots from microarray image is done using these co-ordinates. The present paper proposes an improved fuzzy clustering algorithm Possibility fuzzy local information c means (PFLICM to segment the spot foreground (FG from background (BG. The PFLICM improves fuzzy local information c means (FLICM algorithm by incorporating typicality of a pixel along with gray level information and local spatial information. The performance of the algorithm is validated using a set of simulated cDNA microarray images added with different levels of AWGN noise. The strength of the algorithm is tested by computing the parameters such as the Segmentation matching factor (SMF, Probability of error (pe, Discrepancy distance (D and Normal mean square error (NMSE. SMF value obtained for PFLICM algorithm shows an improvement of 0.9 % and 0.7 % for high noise and low noise microarray images respectively compared to FLICM algorithm. The PFLICM algorithm is also applied on real microarray images and gene expression values are computed.

  13. Personalized PageRank Clustering: A graph clustering algorithm based on random walks

    Science.gov (United States)

    A. Tabrizi, Shayan; Shakery, Azadeh; Asadpour, Masoud; Abbasi, Maziar; Tavallaie, Mohammad Ali

    2013-11-01

    Graph clustering has been an essential part in many methods and thus its accuracy has a significant effect on many applications. In addition, exponential growth of real-world graphs such as social networks, biological networks and electrical circuits demands clustering algorithms with nearly-linear time and space complexity. In this paper we propose Personalized PageRank Clustering (PPC) that employs the inherent cluster exploratory property of random walks to reveal the clusters of a given graph. We combine random walks and modularity to precisely and efficiently reveal the clusters of a graph. PPC is a top-down algorithm so it can reveal inherent clusters of a graph more accurately than other nearly-linear approaches that are mainly bottom-up. It also gives a hierarchy of clusters that is useful in many applications. PPC has a linear time and space complexity and has been superior to most of the available clustering algorithms on many datasets. Furthermore, its top-down approach makes it a flexible solution for clustering problems with different requirements.

  14. Functional clustering algorithm for the analysis of dynamic network data

    Science.gov (United States)

    Feldt, S.; Waddell, J.; Hetrick, V. L.; Berke, J. D.; Żochowski, M.

    2009-05-01

    We formulate a technique for the detection of functional clusters in discrete event data. The advantage of this algorithm is that no prior knowledge of the number of functional groups is needed, as our procedure progressively combines data traces and derives the optimal clustering cutoff in a simple and intuitive manner through the use of surrogate data sets. In order to demonstrate the power of this algorithm to detect changes in network dynamics and connectivity, we apply it to both simulated neural spike train data and real neural data obtained from the mouse hippocampus during exploration and slow-wave sleep. Using the simulated data, we show that our algorithm performs better than existing methods. In the experimental data, we observe state-dependent clustering patterns consistent with known neurophysiological processes involved in memory consolidation.

  15. A Novel Divisive Hierarchical Clustering Algorithm for Geospatial Analysis

    Directory of Open Access Journals (Sweden)

    Shaoning Li

    2017-01-01

    Full Text Available In the fields of geographic information systems (GIS and remote sensing (RS, the clustering algorithm has been widely used for image segmentation, pattern recognition, and cartographic generalization. Although clustering analysis plays a key role in geospatial modelling, traditional clustering methods are limited due to computational complexity, noise resistant ability and robustness. Furthermore, traditional methods are more focused on the adjacent spatial context, which makes it hard for the clustering methods to be applied to multi-density discrete objects. In this paper, a new method, cell-dividing hierarchical clustering (CDHC, is proposed based on convex hull retraction. The main steps are as follows. First, a convex hull structure is constructed to describe the global spatial context of geospatial objects. Then, the retracting structure of each borderline is established in sequence by setting the initial parameter. The objects are split into two clusters (i.e., “sub-clusters” if the retracting structure intersects with the borderlines. Finally, clusters are repeatedly split and the initial parameter is updated until the terminate condition is satisfied. The experimental results show that CDHC separates the multi-density objects from noise sufficiently and also reduces complexity compared to the traditional agglomerative hierarchical clustering algorithm.

  16. An Enhanced Artificial Bee Colony Algorithm with Solution Acceptance Rule and Probabilistic Multisearch

    Directory of Open Access Journals (Sweden)

    Alkın Yurtkuran

    2016-01-01

    Full Text Available The artificial bee colony (ABC algorithm is a popular swarm based technique, which is inspired from the intelligent foraging behavior of honeybee swarms. This paper proposes a new variant of ABC algorithm, namely, enhanced ABC with solution acceptance rule and probabilistic multisearch (ABC-SA to address global optimization problems. A new solution acceptance rule is proposed where, instead of greedy selection between old solution and new candidate solution, worse candidate solutions have a probability to be accepted. Additionally, the acceptance probability of worse candidates is nonlinearly decreased throughout the search process adaptively. Moreover, in order to improve the performance of the ABC and balance the intensification and diversification, a probabilistic multisearch strategy is presented. Three different search equations with distinctive characters are employed using predetermined search probabilities. By implementing a new solution acceptance rule and a probabilistic multisearch approach, the intensification and diversification performance of the ABC algorithm is improved. The proposed algorithm has been tested on well-known benchmark functions of varying dimensions by comparing against novel ABC variants, as well as several recent state-of-the-art algorithms. Computational results show that the proposed ABC-SA outperforms other ABC variants and is superior to state-of-the-art algorithms proposed in the literature.

  17. Evaluation of Cutting Performance of Diamond Saw Machine Using Artificial Bee Colony (ABC Algorithm

    Directory of Open Access Journals (Sweden)

    Masoud Akhyani

    2017-12-01

    Full Text Available Artificial Intelligence (AI techniques are used for solving the intractable engineering problems. In this study, it is aimed to study the application of artificial bee colony algorithm for predicting the performance of circular diamond saw in sawing of hard rocks. For this purpose, varieties of fourteen types of hard rocks were cut in laboratory using a cutting rig at 5 mm depth of cut, 40 cm/min feed rate and 3000 rpm peripheral speed. Four major mechanical and physical properties of studied rocks such as uniaxial compressive strength (UCS, Schimazek abrasivity factor (SF-a, Mohs hardness (Mh, and Young’s modulus (Ym were determined in rock mechanic laboratory. Artificial bee colony (ABC was used to classify the performance of circular diamond saw based on mentioned mechanical properties of rocks. Ampere consumption and wear rate of diamond saw were selected as criteria to evaluate the result of ABC algorithm. Ampere consumption was determined during cutting process and the average wear rate of diamond saw was calculated from width, length and height loss. The results of comparison between ABC’s results and cutting performance (ampere consumption and wear rate of diamond saw indicated the ability of metaheuristic algorithm such as ABC to evaluate the cutting performance.

  18. AUTOMATA PROGRAMS CONSTRUCTION FROM SPECIFICATION WITH AN ANT COLONY OPTIMIZATION ALGORITHM BASED ON MUTATION GRAPH

    Directory of Open Access Journals (Sweden)

    Daniil S. Chivilikhin

    2014-11-01

    Full Text Available The procedure of testing traditionally used in software engineering cannot guarantee program correctness; therefore verification is used at the excess requirements to programs reliability. Verification makes it possible to check certain properties of programs in all possible computational states; however, this process is very complex. In the model checking method a model of the program is built (often, manually and requirements in terms of temporal logic are formulated. Such temporal properties of the model can be checked automatically. The main issue in this framework is the gap between the program and its model. Automata-based programming paradigm gives the possibility to overcome this limitation. In this paradigm, program logic is represented using finite-state machines. The advantage of finite-state machines is that their models can be constructed automatically. The paper deals with the application of mutation-based ant colony optimization algorithm to the problem of finite-state machine construction from their specification, defined by test scenarios and temporal properties. The presented approach has been tested on the elevator doors control problem as well as on randomly generated data. Obtained results show the ant colony algorithm is two-three times faster than the previously used genetic algorithm. The proposed approach can be recommended for inferring control programs for critical systems.

  19. Directed Bee Colony Optimization Algorithm to Solve the Nurse Rostering Problem.

    Science.gov (United States)

    Rajeswari, M; Amudhavel, J; Pothula, Sujatha; Dhavachelvan, P

    2017-01-01

    The Nurse Rostering Problem is an NP-hard combinatorial optimization, scheduling problem for assigning a set of nurses to shifts per day by considering both hard and soft constraints. A novel metaheuristic technique is required for solving Nurse Rostering Problem (NRP). This work proposes a metaheuristic technique called Directed Bee Colony Optimization Algorithm using the Modified Nelder-Mead Method for solving the NRP. To solve the NRP, the authors used a multiobjective mathematical programming model and proposed a methodology for the adaptation of a Multiobjective Directed Bee Colony Optimization (MODBCO). MODBCO is used successfully for solving the multiobjective problem of optimizing the scheduling problems. This MODBCO is an integration of deterministic local search, multiagent particle system environment, and honey bee decision-making process. The performance of the algorithm is assessed using the standard dataset INRC2010, and it reflects many real-world cases which vary in size and complexity. The experimental analysis uses statistical tools to show the uniqueness of the algorithm on assessment criteria.

  20. Identifying multiple influential spreaders by a heuristic clustering algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Bao, Zhong-Kui [School of Mathematical Science, Anhui University, Hefei 230601 (China); Liu, Jian-Guo [Data Science and Cloud Service Research Center, Shanghai University of Finance and Economics, Shanghai, 200133 (China); Zhang, Hai-Feng, E-mail: haifengzhang1978@gmail.com [School of Mathematical Science, Anhui University, Hefei 230601 (China); Department of Communication Engineering, North University of China, Taiyuan, Shan' xi 030051 (China)

    2017-03-18

    The problem of influence maximization in social networks has attracted much attention. However, traditional centrality indices are suitable for the case where a single spreader is chosen as the spreading source. Many times, spreading process is initiated by simultaneously choosing multiple nodes as the spreading sources. In this situation, choosing the top ranked nodes as multiple spreaders is not an optimal strategy, since the chosen nodes are not sufficiently scattered in networks. Therefore, one ideal situation for multiple spreaders case is that the spreaders themselves are not only influential but also they are dispersively distributed in networks, but it is difficult to meet the two conditions together. In this paper, we propose a heuristic clustering (HC) algorithm based on the similarity index to classify nodes into different clusters, and finally the center nodes in clusters are chosen as the multiple spreaders. HC algorithm not only ensures that the multiple spreaders are dispersively distributed in networks but also avoids the selected nodes to be very “negligible”. Compared with the traditional methods, our experimental results on synthetic and real networks indicate that the performance of HC method on influence maximization is more significant. - Highlights: • A heuristic clustering algorithm is proposed to identify the multiple influential spreaders in complex networks. • The algorithm can not only guarantee the selected spreaders are sufficiently scattered but also avoid to be “insignificant”. • The performance of our algorithm is generally better than other methods, regardless of real networks or synthetic networks.

  1. Identifying multiple influential spreaders by a heuristic clustering algorithm

    International Nuclear Information System (INIS)

    Bao, Zhong-Kui; Liu, Jian-Guo; Zhang, Hai-Feng

    2017-01-01

    The problem of influence maximization in social networks has attracted much attention. However, traditional centrality indices are suitable for the case where a single spreader is chosen as the spreading source. Many times, spreading process is initiated by simultaneously choosing multiple nodes as the spreading sources. In this situation, choosing the top ranked nodes as multiple spreaders is not an optimal strategy, since the chosen nodes are not sufficiently scattered in networks. Therefore, one ideal situation for multiple spreaders case is that the spreaders themselves are not only influential but also they are dispersively distributed in networks, but it is difficult to meet the two conditions together. In this paper, we propose a heuristic clustering (HC) algorithm based on the similarity index to classify nodes into different clusters, and finally the center nodes in clusters are chosen as the multiple spreaders. HC algorithm not only ensures that the multiple spreaders are dispersively distributed in networks but also avoids the selected nodes to be very “negligible”. Compared with the traditional methods, our experimental results on synthetic and real networks indicate that the performance of HC method on influence maximization is more significant. - Highlights: • A heuristic clustering algorithm is proposed to identify the multiple influential spreaders in complex networks. • The algorithm can not only guarantee the selected spreaders are sufficiently scattered but also avoid to be “insignificant”. • The performance of our algorithm is generally better than other methods, regardless of real networks or synthetic networks.

  2. Improving the Power Quality in Tehran Metro Line-Two Using the Ant Colony Algorithm

    Directory of Open Access Journals (Sweden)

    H. Ehteshami

    2017-12-01

    Full Text Available This research aims to survey the improvement of power quality in Tehran metro line 2 using the ant colony algorithm and to investigate all the factors affecting the achievement of this goal. In order to put Tehran on the road of sustainable development, finding a solution for dealing with air pollution is essential. The use of public transportation, especially metro, is one of the ways to achieve this goal. Since the highest share of pollutants in Tehran belongs to cars and mobile sources, relative statistical indicators are estimated through assuming the effect of metro lines development and subsequently reduction of traffic on power quality index.

  3. Hybrid ANFIS with ant colony optimization algorithm for prediction of shear wave velocity from a carbonate reservoir in Iran

    Directory of Open Access Journals (Sweden)

    Hadi Fattahi

    2016-12-01

    Full Text Available Shear wave velocity (Vs data are key information for petrophysical, geophysical and geomechanical studies. Although compressional wave velocity (Vp measurements exist in almost all wells, shear wave velocity is not recorded for most of elderly wells due to lack of technologic tools. Furthermore, measurement of shear wave velocity is to some extent costly. This study proposes a novel methodology to remove aforementioned problems by use of hybrid adaptive neuro fuzzy inference system (ANFIS with ant colony optimization algorithm (ACO based on fuzzy c–means clustering (FCM and subtractive clustering (SCM. The ACO is combined with two ANFIS models for determining the optimal value of its user–defined parameters. The optimization implementation by the ACO significantly improves the generalization ability of the ANFIS models. These models are used in this study to formulate conventional well log data into Vs in a quick, cheap, and accurate manner. A total of 3030 data points was used for model construction and 833 data points were employed for assessment of ANFIS models. Finally, a comparison among ANFIS models, and six well–known empirical correlations demonstrated ANFIS models outperformed other methods. This strategy was successfully applied in the Marun reservoir, Iran.

  4. Mobile Ad Hoc Network Energy Cost Algorithm Based on Artificial Bee Colony

    Directory of Open Access Journals (Sweden)

    Mustafa Tareq

    2017-01-01

    Full Text Available A mobile ad hoc network (MANET is a collection of mobile nodes that dynamically form a temporary network without using any existing network infrastructure. MANET selects a path with minimal number of intermediate nodes to reach the destination node. As the distance between each node increases, the quantity of transmission power increases. The power level of nodes affects the simplicity with which a route is constituted between a couple of nodes. This study utilizes the swarm intelligence technique through the artificial bee colony (ABC algorithm to optimize the energy consumption in a dynamic source routing (DSR protocol in MANET. The proposed algorithm is called bee DSR (BEEDSR. The ABC algorithm is used to identify the optimal path from the source to the destination to overcome energy problems. The performance of the BEEDSR algorithm is compared with DSR and bee-inspired protocols (BeeIP. The comparison was conducted based on average energy consumption, average throughput, average end-to-end delay, routing overhead, and packet delivery ratio performance metrics, varying the node speed and packet size. The BEEDSR algorithm is superior in performance than other protocols in terms of energy conservation and delay degradation relating to node speed and packet size.

  5. An Improved Artificial Bee Colony Algorithm and Its Application to Multi-Objective Optimal Power Flow

    Directory of Open Access Journals (Sweden)

    Xuanhu He

    2015-03-01

    Full Text Available Optimal power flow (OPF objective functions involve minimization of the total fuel costs of generating units, minimization of atmospheric pollutant emissions, minimization of active power losses and minimization of voltage deviations. In this paper, a fuzzy multi-objective OPF model is established by the fuzzy membership functions and the fuzzy satisfaction-maximizing method. The improved artificial bee colony (IABC algorithm is applied to solve the model. In the IABC algorithm, the mutation and crossover operations of a differential evolution algorithm are utilized to generate new solutions to improve exploitation capacity; tent chaos mapping is utilized to generate initial swarms, reference mutation solutions and the reference dimensions of crossover operations to improve swarm diversity. The proposed method is applied to multi-objective OPF problems in IEEE 30-bus, IEEE 57-bus and IEEE 300-bus test systems. The results are compared with those obtained by other algorithms, which demonstrates the effectiveness and superiority of the IABC algorithm, and how the optimal scheme obtained by the proposed model can make systems more economical and stable.

  6. A Novel Cluster Head Selection Algorithm Based on Fuzzy Clustering and Particle Swarm Optimization.

    Science.gov (United States)

    Ni, Qingjian; Pan, Qianqian; Du, Huimin; Cao, Cen; Zhai, Yuqing

    2017-01-01

    An important objective of wireless sensor network is to prolong the network life cycle, and topology control is of great significance for extending the network life cycle. Based on previous work, for cluster head selection in hierarchical topology control, we propose a solution based on fuzzy clustering preprocessing and particle swarm optimization. More specifically, first, fuzzy clustering algorithm is used to initial clustering for sensor nodes according to geographical locations, where a sensor node belongs to a cluster with a determined probability, and the number of initial clusters is analyzed and discussed. Furthermore, the fitness function is designed considering both the energy consumption and distance factors of wireless sensor network. Finally, the cluster head nodes in hierarchical topology are determined based on the improved particle swarm optimization. Experimental results show that, compared with traditional methods, the proposed method achieved the purpose of reducing the mortality rate of nodes and extending the network life cycle.

  7. Artificial bee colony algorithm for economic load dispatch with wind power energy

    Directory of Open Access Journals (Sweden)

    Safari Amin

    2016-01-01

    Full Text Available This paper presents an efficient Artificial Bee Colony (ABC algorithm for solving large scale economic load dispatch (ELD problems in power networks. To realize the ELD, the valve-point loading effect, system load demand, power losses, ramp rate limits and prohibited operation zones are considered here. Simulations were performed on four different power systems with 3, 6, 15 and 40 generating units and the results are compared with two forms of power systems, one power system is with a wind power generator and other power system is without a wind power generator. The results of this study reveal that the proposed approach is able to find appreciable ELD solutions than those of previous algorithms.

  8. Uncertain multiobjective redundancy allocation problem of repairable systems based on artificial bee colony algorithm

    Directory of Open Access Journals (Sweden)

    Guo Jiansheng

    2014-12-01

    Full Text Available Based on the uncertainty theory, this paper is devoted to the redundancy allocation problem in repairable parallel-series systems with uncertain factors, where the failure rate, repair rate and other relative coefficients involved are considered as uncertain variables. The availability of the system and the corresponding designing cost are considered as two optimization objectives. A crisp multiobjective optimization formulation is presented on the basis of uncertainty theory to solve this resultant problem. For solving this problem efficiently, a new multiobjective artificial bee colony algorithm is proposed to search the Pareto efficient set, which introduces rank value and crowding distance in the greedy selection strategy, applies fast non-dominated sort procedure in the exploitation search and inserts tournament selection in the onlooker bee phase. It shows that the proposed algorithm outperforms NSGA-II greatly and can solve multiobjective redundancy allocation problem efficiently. Finally, a numerical example is provided to illustrate this approach.

  9. A new hybrid imperialist competitive algorithm on data clustering

    Indian Academy of Sciences (India)

    Clustering is a process for partitioning datasets. This technique is very useful for optimum solution. -means is one of the simplest and the most famous methods that is based on square error criterion. This algorithm depends on initial states and converges to local optima. Some recent researches show that -means ...

  10. Fuzzy cluster means algorithm for the diagnosis of confusable disease

    African Journals Online (AJOL)

    ... end platform while Microsoft Access was used as the database application. The system gives a measure of each disease within a set of confusable disease. The proposed system had a classification accuracy of 60%. Keywords: Artificial Intelligence, expert system Fuzzy cluster – means Algorithm, physician, Diagnosis ...

  11. A new hybrid imperialist competitive algorithm on data clustering

    Indian Academy of Sciences (India)

    -mean. As k-means is an investigative method, there is no guarantee that it will converge to the global optimum, and the result may depend on the initial clusters. Because of the fact that the algorithm is usually very fast, it is common to run it ...

  12. Arc Based Ant Colony Optimization Algorithm for optimal design of gravitational sewer networks

    Directory of Open Access Journals (Sweden)

    R. Moeini

    2017-06-01

    Full Text Available In this paper, constrained and unconstrained versions of a new formulation of Ant Colony Optimization Algorithm (ACOA named Arc Based Ant Colony Optimization Algorithm (ABACOA are augmented with the Tree Growing Algorithm (TGA and used for the optimal layout and pipe size design of gravitational sewer networks. The main advantages offered by the proposed ABACOA formulation are proper definition of heuristic information, a useful component of the ant-based algorithms, and proper trade-off between the two conflicting search attributes of exploration and exploitation. In both the formulations, the TGA is used to incrementally construct feasible tree-like layouts out of the base layout. In the first formulation, unconstrained version of ABACOA is used to determine the nodal cover depths of sewer pipes while in the second formulation, a constrained version of ABACOA is used to determine the nodal cover depths of sewer pipes which satisfy the pipe slopes constraint. Three different methods of cut determination are also proposed to complete the construction of a tree-like network containing all base layout pipes, here. The proposed formulations are used to solve three test examples of different scales and the results are presented and compared with other available results in the literature. Comparison of the results shows that best results are obtained using the third cutting method in both the formulations. In addition, the results indicate the ability of the proposed methods and in particular the constrained version of ABACOA equipped with TGA to solve sewer networks design optimization problem. To be specific, the constrained version of ABACOA has been able to produce results 0.1%, 1% and 2.1% cheaper than those obtained by the unconstrained version of ABACOA for the first, second and the third test examples, respectively.

  13. Journal Bearing Optimization Using Nonsorted Genetic Algorithm and Artificial Bee Colony Algorithm

    Directory of Open Access Journals (Sweden)

    L. Gorasso

    2014-05-01

    Full Text Available In this work, a journal bearing optimization process has been developed and is divided into two stages. Each one has a set of decision variables and custom objectives aggregating performances with a weighting strategy. The performance functions used are an artificial neural network, trained with Reynolds equation solutions, and a CFD simulation of the bearings carried out with commercial software. The results show the capabilities of the algorithm to design and optimize journal bearings by reducing both power loss and mass flow with respect to ones designed with traditional methods, as well as by minimizing the maximum and average temperature.

  14. A HYBRID HEURISTIC ALGORITHM FOR THE CLUSTERED TRAVELING SALESMAN PROBLEM

    Directory of Open Access Journals (Sweden)

    Mário Mestria

    2016-04-01

    Full Text Available ABSTRACT This paper proposes a hybrid heuristic algorithm, based on the metaheuristics Greedy Randomized Adaptive Search Procedure, Iterated Local Search and Variable Neighborhood Descent, to solve the Clustered Traveling Salesman Problem (CTSP. Hybrid Heuristic algorithm uses several variable neighborhood structures combining the intensification (using local search operators and diversification (constructive heuristic and perturbation routine. In the CTSP, the vertices are partitioned into clusters and all vertices of each cluster have to be visited contiguously. The CTSP is -hard since it includes the well-known Traveling Salesman Problem (TSP as a special case. Our hybrid heuristic is compared with three heuristics from the literature and an exact method. Computational experiments are reported for different classes of instances. Experimental results show that the proposed hybrid heuristic obtains competitive results within reasonable computational time.

  15. Analysis of Network Clustering Algorithms and Cluster Quality Metrics at Scale.

    Science.gov (United States)

    Emmons, Scott; Kobourov, Stephen; Gallant, Mike; Börner, Katy

    2016-01-01

    Notions of community quality underlie the clustering of networks. While studies surrounding network clustering are increasingly common, a precise understanding of the realtionship between different cluster quality metrics is unknown. In this paper, we examine the relationship between stand-alone cluster quality metrics and information recovery metrics through a rigorous analysis of four widely-used network clustering algorithms-Louvain, Infomap, label propagation, and smart local moving. We consider the stand-alone quality metrics of modularity, conductance, and coverage, and we consider the information recovery metrics of adjusted Rand score, normalized mutual information, and a variant of normalized mutual information used in previous work. Our study includes both synthetic graphs and empirical data sets of sizes varying from 1,000 to 1,000,000 nodes. We find significant differences among the results of the different cluster quality metrics. For example, clustering algorithms can return a value of 0.4 out of 1 on modularity but score 0 out of 1 on information recovery. We find conductance, though imperfect, to be the stand-alone quality metric that best indicates performance on the information recovery metrics. Additionally, our study shows that the variant of normalized mutual information used in previous work cannot be assumed to differ only slightly from traditional normalized mutual information. Smart local moving is the overall best performing algorithm in our study, but discrepancies between cluster evaluation metrics prevent us from declaring it an absolutely superior algorithm. Interestingly, Louvain performed better than Infomap in nearly all the tests in our study, contradicting the results of previous work in which Infomap was superior to Louvain. We find that although label propagation performs poorly when clusters are less clearly defined, it scales efficiently and accurately to large graphs with well-defined clusters.

  16. Stochastic time-dependent vehicle routing problem: Mathematical models and ant colony algorithm

    Directory of Open Access Journals (Sweden)

    Zhengyu Duan

    2015-11-01

    Full Text Available This article addresses the stochastic time-dependent vehicle routing problem. Two mathematical models named robust optimal schedule time model and minimum expected schedule time model are proposed for stochastic time-dependent vehicle routing problem, which can guarantee delivery within the time windows of customers. The robust optimal schedule time model only requires the variation range of link travel time, which can be conveniently derived from historical traffic data. In addition, the robust optimal schedule time model based on robust optimization method can be converted into a time-dependent vehicle routing problem. Moreover, an ant colony optimization algorithm is designed to solve stochastic time-dependent vehicle routing problem. As the improvements in initial solution and transition probability, ant colony optimization algorithm has a good performance in convergence. Through computational instances and Monte Carlo simulation tests, robust optimal schedule time model is proved to be better than minimum expected schedule time model in computational efficiency and coping with the travel time fluctuations. Therefore, robust optimal schedule time model is applicable in real road network.

  17. Design of fuzzy classifier for diabetes disease using Modified Artificial Bee Colony algorithm.

    Science.gov (United States)

    Beloufa, Fayssal; Chikh, M A

    2013-10-01

    In this study, diagnosis of diabetes disease, which is one of the most important diseases, is conducted with artificial intelligence techniques. We have proposed a novel Artificial Bee Colony (ABC) algorithm in which a mutation operator is added to an Artificial Bee Colony for improving its performance. When the current best solution cannot be updated, a blended crossover operator (BLX-α) of genetic algorithm is applied, in order to enhance the diversity of ABC, without compromising with the solution quality. This modified version of ABC is used as a new tool to create and optimize automatically the membership functions and rules base directly from data. We take the diabetes dataset used in our work from the UCI machine learning repository. The performances of the proposed method are evaluated through classification rate, sensitivity and specificity values using 10-fold cross-validation method. The obtained classification rate of our method is 84.21% and it is very promising when compared with the previous research in the literature for the same problem. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

  18. Which clustering algorithm is better for predicting protein complexes?

    Directory of Open Access Journals (Sweden)

    Moschopoulos Charalampos N

    2011-12-01

    Full Text Available Abstract Background Protein-Protein interactions (PPI play a key role in determining the outcome of most cellular processes. The correct identification and characterization of protein interactions and the networks, which they comprise, is critical for understanding the molecular mechanisms within the cell. Large-scale techniques such as pull down assays and tandem affinity purification are used in order to detect protein interactions in an organism. Today, relatively new high-throughput methods like yeast two hybrid, mass spectrometry, microarrays, and phage display are also used to reveal protein interaction networks. Results In this paper we evaluated four different clustering algorithms using six different interaction datasets. We parameterized the MCL, Spectral, RNSC and Affinity Propagation algorithms and applied them to six PPI datasets produced experimentally by Yeast 2 Hybrid (Y2H and Tandem Affinity Purification (TAP methods. The predicted clusters, so called protein complexes, were then compared and benchmarked with already known complexes stored in published databases. Conclusions While results may differ upon parameterization, the MCL and RNSC algorithms seem to be more promising and more accurate at predicting PPI complexes. Moreover, they predict more complexes than other reviewed algorithms in absolute numbers. On the other hand the spectral clustering algorithm achieves the highest valid prediction rate in our experiments. However, it is nearly always outperformed by both RNSC and MCL in terms of the geometrical accuracy while it generates the fewest valid clusters than any other reviewed algorithm. This article demonstrates various metrics to evaluate the accuracy of such predictions as they are presented in the text below. Supplementary material can be found at: http://www.bioacademy.gr/bioinformatics/projects/ppireview.htm

  19. Clustering algorithm evaluation and the development of a replacement for procedure 1. [for crop inventories

    Science.gov (United States)

    Lennington, R. K.; Johnson, J. K.

    1979-01-01

    An efficient procedure which clusters data using a completely unsupervised clustering algorithm and then uses labeled pixels to label the resulting clusters or perform a stratified estimate using the clusters as strata is developed. Three clustering algorithms, CLASSY, AMOEBA, and ISOCLS, are compared for efficiency. Three stratified estimation schemes and three labeling schemes are also considered and compared.

  20. Improved gravitation field algorithm and its application in hierarchical clustering.

    Directory of Open Access Journals (Sweden)

    Ming Zheng

    Full Text Available BACKGROUND: Gravitation field algorithm (GFA is a new optimization algorithm which is based on an imitation of natural phenomena. GFA can do well both for searching global minimum and multi-minima in computational biology. But GFA needs to be improved for increasing efficiency, and modified for applying to some discrete data problems in system biology. METHOD: An improved GFA called IGFA was proposed in this paper. Two parts were improved in IGFA. The first one is the rule of random division, which is a reasonable strategy and makes running time shorter. The other one is rotation factor, which can improve the accuracy of IGFA. And to apply IGFA to the hierarchical clustering, the initial part and the movement operator were modified. RESULTS: Two kinds of experiments were used to test IGFA. And IGFA was applied to hierarchical clustering. The global minimum experiment was used with IGFA, GFA, GA (genetic algorithm and SA (simulated annealing. Multi-minima experiment was used with IGFA and GFA. The two experiments results were compared with each other and proved the efficiency of IGFA. IGFA is better than GFA both in accuracy and running time. For the hierarchical clustering, IGFA is used to optimize the smallest distance of genes pairs, and the results were compared with GA and SA, singular-linkage clustering, UPGMA. The efficiency of IGFA is proved.

  1. Multiple fuzzy c-means clustering algorithm in medical diagnosis.

    Science.gov (United States)

    Wu, Yanping; Duan, Huilong; Du, Shufeng

    2015-01-01

    In recent years, the use of the fuzzy c-means (FCM) clustering techniques in medical diagnosis has steadily increased, because of its effectiveness in recognizing systems in the medical database to help medical experts diagnosing diseases. However, its performance is highly dependent on the randomly initialized cluster centroids which may allow the diagnosis to be trapped into the problem of the local optimum. This paper proposes a multiple fuzzy c-means (MFCM) algorithm for medical diagnosis. The new method optimizes the initial optimizing cluster centers by comparing the Euclidean distance between patient data. Further, this paper assigns a set of weights to the features of a certain disease to equalize their difference influence as a substitute for data normalization. The performance of proposed MFCM algorithm was demonstrated through dividing complex primary headache data into Migraine, Tension-Type Headache (TTH), Trigeminal Autonomic Cephalalgias (TACs) and other primary headache disorders. In addition the superiority of MFCM algorithm was proven by comparing analytical results with other state-of-the-art clustering methods. This MFCM method has shown a new application in medical diagnosis.

  2. Stochastic cluster algorithms for discrete Gaussian (SOS) models

    International Nuclear Information System (INIS)

    Evertz, H.G.; Hamburg Univ.; Hasenbusch, M.; Marcu, M.; Tel Aviv Univ.; Pinn, K.; Muenster Univ.; Solomon, S.

    1990-10-01

    We present new Monte Carlo cluster algorithms which eliminate critical slowing down in the simulation of solid-on-solid models. In this letter we focus on the two-dimensional discrete Gaussian model. The algorithms are based on reflecting the integer valued spin variables with respect to appropriately chosen reflection planes. The proper choice of the reflection plane turns out to be crucial in order to obtain a small dynamical exponent z. Actually, the successful versions of our algorithm are a mixture of two different procedures for choosing the reflection plane, one of them ergodic but slow, the other one non-ergodic and also slow when combined with a Metropolis algorithm. (orig.)

  3. Exploring New Clustering Algorithms for the CMS Tracker FED

    CERN Document Server

    Gamboa Alvarado, Jose Leandro

    2013-01-01

    In the current Front End (FE) firmware clusters of hits within the APV frames are found using a simple threshold comparison (which is made between the data and a 3 or 5 sigma strip noise cut) on reordered pedestal and Common Mode (CM) noise subtracted data. In addition the CM noise subtraction requires the baseline of each APV frame to be approximately uniform. Therefore, the current algorithm will fail if the APV baseline exhibits large-scale non-uniform behavior. Under very high luminosity conditions the assumption of a uniform APV baseline breaks down and the FED is unable to maintain a high efficiency of cluster finding. \

  4. clusterMaker: a multi-algorithm clustering plugin for Cytoscape

    Directory of Open Access Journals (Sweden)

    Morris John H

    2011-11-01

    Full Text Available Abstract Background In the post-genomic era, the rapid increase in high-throughput data calls for computational tools capable of integrating data of diverse types and facilitating recognition of biologically meaningful patterns within them. For example, protein-protein interaction data sets have been clustered to identify stable complexes, but scientists lack easily accessible tools to facilitate combined analyses of multiple data sets from different types of experiments. Here we present clusterMaker, a Cytoscape plugin that implements several clustering algorithms and provides network, dendrogram, and heat map views of the results. The Cytoscape network is linked to all of the other views, so that a selection in one is immediately reflected in the others. clusterMaker is the first Cytoscape plugin to implement such a wide variety of clustering algorithms and visualizations, including the only implementations of hierarchical clustering, dendrogram plus heat map visualization (tree view, k-means, k-medoid, SCPS, AutoSOME, and native (Java MCL. Results Results are presented in the form of three scenarios of use: analysis of protein expression data using a recently published mouse interactome and a mouse microarray data set of nearly one hundred diverse cell/tissue types; the identification of protein complexes in the yeast Saccharomyces cerevisiae; and the cluster analysis of the vicinal oxygen chelate (VOC enzyme superfamily. For scenario one, we explore functionally enriched mouse interactomes specific to particular cellular phenotypes and apply fuzzy clustering. For scenario two, we explore the prefoldin complex in detail using both physical and genetic interaction clusters. For scenario three, we explore the possible annotation of a protein as a methylmalonyl-CoA epimerase within the VOC superfamily. Cytoscape session files for all three scenarios are provided in the Additional Files section. Conclusions The Cytoscape plugin cluster

  5. The chaotic global best artificial bee colony algorithm for the multi-area economic/emission dispatch

    International Nuclear Information System (INIS)

    Secui, Dinu Calin

    2015-01-01

    This paper suggests a chaotic optimizing method, based on the GBABC (global best artificial bee colony algorithm), where the random sequences used in updating the solutions of this algorithm are replaced with chaotic sequences generated by chaotic maps. The new algorithm, called chaotic CGBABC (global best artificial bee colony algorithm), is used to solving the multi-area economic/emission dispatch problem taking into consideration the valve-point effects, the transmission line losses, multi-fuel sources, prohibited operating zones, tie line capacity and power transfer cost between different areas of the system. The behaviour of the CGBABC algorithm is studied considering ten chaotic maps both one-dimensional and bi-dimensional, with various probability density functions. The CGBABC algorithm's performance including a variety of chaotic maps is tested on five systems (6-unit, 10-unit, 16-unit, 40-unit and 120-unit) with different characteristics, constraints and sizes. The results comparison highlights a hierarchy in the chaotic maps included in the CGBABC algorithm and shows that it performs better than the classical ABC algorithm, the GBABC algorithm and other optimization techniques. - Highlights: • A chaotic global best ABC algorithm (CGBABC) is presented. • CGBABC is applied for solving the multi-area economic/emission dispatch problem. • Valve-point effects, multi-fuel sources, POZ, transmission losses were considered. • The algorithm is tested on five systems having 6, 10, 16, 40 and 120 thermal units. • CGBABC algorithm outperforms several optimization techniques.

  6. Use of artificial bee colonies algorithm as numerical approximation of differential equations solution

    Science.gov (United States)

    Fikri, Fariz Fahmi; Nuraini, Nuning

    2018-03-01

    The differential equation is one of the branches in mathematics which is closely related to human life problems. Some problems that occur in our life can be modeled into differential equations as well as systems of differential equations such as the Lotka-Volterra model and SIR model. Therefore, solving a problem of differential equations is very important. Some differential equations are difficult to solve, so numerical methods are needed to solve that problems. Some numerical methods for solving differential equations that have been widely used are Euler Method, Heun Method, Runge-Kutta and others. However, some of these methods still have some restrictions that cause the method cannot be used to solve more complex problems such as an evaluation interval that we cannot change freely. New methods are needed to improve that problems. One of the method that can be used is the artificial bees colony algorithm. This algorithm is one of metaheuristic algorithm method, which can come out from local search space and do exploration in solution search space so that will get better solution than other method.

  7. Artificial Bee Colony Algorithm for Transient Performance Augmentation of Grid Connected Distributed Generation

    Science.gov (United States)

    Chatterjee, A.; Ghoshal, S. P.; Mukherjee, V.

    In this paper, a conventional thermal power system equipped with automatic voltage regulator, IEEE type dual input power system stabilizer (PSS) PSS3B and integral controlled automatic generation control loop is considered. A distributed generation (DG) system consisting of aqua electrolyzer, photovoltaic cells, diesel engine generator, and some other energy storage devices like flywheel energy storage system and battery energy storage system is modeled. This hybrid distributed system is connected to the grid. While integrating this DG with the onventional thermal power system, improved transient performance is noticed. Further improvement in the transient performance of this grid connected DG is observed with the usage of superconducting magnetic energy storage device. The different tunable parameters of the proposed hybrid power system model are optimized by artificial bee colony (ABC) algorithm. The optimal solutions offered by the ABC algorithm are compared with those offered by genetic algorithm (GA). It is also revealed that the optimizing performance of the ABC is better than the GA for this specific application.

  8. FCM Clustering Algorithms for Segmentation of Brain MR Images

    Directory of Open Access Journals (Sweden)

    Yogita K. Dubey

    2016-01-01

    Full Text Available The study of brain disorders requires accurate tissue segmentation of magnetic resonance (MR brain images which is very important for detecting tumors, edema, and necrotic tissues. Segmentation of brain images, especially into three main tissue types: Cerebrospinal Fluid (CSF, Gray Matter (GM, and White Matter (WM, has important role in computer aided neurosurgery and diagnosis. Brain images mostly contain noise, intensity inhomogeneity, and weak boundaries. Therefore, accurate segmentation of brain images is still a challenging area of research. This paper presents a review of fuzzy c-means (FCM clustering algorithms for the segmentation of brain MR images. The review covers the detailed analysis of FCM based algorithms with intensity inhomogeneity correction and noise robustness. Different methods for the modification of standard fuzzy objective function with updating of membership and cluster centroid are also discussed.

  9. Advanced defect detection algorithm using clustering in ultrasonic NDE

    Science.gov (United States)

    Gongzhang, Rui; Gachagan, Anthony

    2016-02-01

    A range of materials used in industry exhibit scattering properties which limits ultrasonic NDE. Many algorithms have been proposed to enhance defect detection ability, such as the well-known Split Spectrum Processing (SSP) technique. Scattering noise usually cannot be fully removed and the remaining noise can be easily confused with real feature signals, hence becoming artefacts during the image interpretation stage. This paper presents an advanced algorithm to further reduce the influence of artefacts remaining in A-scan data after processing using a conventional defect detection algorithm. The raw A-scan data can be acquired from either traditional single transducer or phased array configurations. The proposed algorithm uses the concept of unsupervised machine learning to cluster segmental defect signals from pre-processed A-scans into different classes. The distinction and similarity between each class and the ensemble of randomly selected noise segments can be observed by applying a classification algorithm. Each class will then be labelled as `legitimate reflector' or `artefacts' based on this observation and the expected probability of defection (PoD) and probability of false alarm (PFA) determined. To facilitate data collection and validate the proposed algorithm, a 5MHz linear array transducer is used to collect A-scans from both austenitic steel and Inconel samples. Each pulse-echo A-scan is pre-processed using SSP and the subsequent application of the proposed clustering algorithm has provided an additional reduction to PFA while maintaining PoD for both samples compared with SSP results alone.

  10. An Artificial Bee Colony Algorithm for the Job Shop Scheduling Problem with Random Processing Times

    Directory of Open Access Journals (Sweden)

    Rui Zhang

    2011-09-01

    Full Text Available Due to the influence of unpredictable random events, the processing time of each operation should be treated as random variables if we aim at a robust production schedule. However, compared with the extensive research on the deterministic model, the stochastic job shop scheduling problem (SJSSP has not received sufficient attention. In this paper, we propose an artificial bee colony (ABC algorithm for SJSSP with the objective of minimizing the maximum lateness (which is an index of service quality. First, we propose a performance estimate for preliminary screening of the candidate solutions. Then, the K-armed bandit model is utilized for reducing the computational burden in the exact evaluation (through Monte Carlo simulation process. Finally, the computational results on different-scale test problems validate the effectiveness and efficiency of the proposed approach.

  11. DESIGNING DAILY PATROL ROUTES FOR POLICING BASED ON ANT COLONY ALGORITHM

    Directory of Open Access Journals (Sweden)

    H. Chen

    2015-07-01

    Full Text Available In this paper, we address the problem of planning police patrol routes to regularly cover street segments of high crime density (hotspots with limited police forces. A good patrolling strategy is required to minimise the average time lag between two consecutive visits to hotspots, as well as coordinating multiple patrollers and imparting unpredictability in patrol routes. Previous studies have designed different police patrol strategies for routing police patrol, but these strategies have difficulty in generalising to real patrolling and meeting various requirements. In this research we develop a new police patrolling strategy based on Bayesian method and ant colony algorithm. In this strategy, virtual marker (pheromone is laid to mark the visiting history of each crime hotspot, and patrollers continuously decide which hotspot to patrol next based on pheromone level and other variables. Simulation results using real data testifies the effective, scalable, unpredictable and extensible nature of this strategy.

  12. Synchronous Firefly Algorithm for Cluster Head Selection in WSN

    Directory of Open Access Journals (Sweden)

    Madhusudhanan Baskaran

    2015-01-01

    Full Text Available Wireless Sensor Network (WSN consists of small low-cost, low-power multifunctional nodes interconnected to efficiently aggregate and transmit data to sink. Cluster-based approaches use some nodes as Cluster Heads (CHs and organize WSNs efficiently for aggregation of data and energy saving. A CH conveys information gathered by cluster nodes and aggregates/compresses data before transmitting it to a sink. However, this additional responsibility of the node results in a higher energy drain leading to uneven network degradation. Low Energy Adaptive Clustering Hierarchy (LEACH offsets this by probabilistically rotating cluster heads role among nodes with energy above a set threshold. CH selection in WSN is NP-Hard as optimal data aggregation with efficient energy savings cannot be solved in polynomial time. In this work, a modified firefly heuristic, synchronous firefly algorithm, is proposed to improve the network performance. Extensive simulation shows the proposed technique to perform well compared to LEACH and energy-efficient hierarchical clustering. Simulations show the effectiveness of the proposed method in decreasing the packet loss ratio by an average of 9.63% and improving the energy efficiency of the network when compared to LEACH and EEHC.

  13. Аdaptive clustering algorithm for recommender systems

    OpenAIRE

    Stekh, Yu.; Artsibasov, V.

    2012-01-01

    In this article adaptive clustering algorithm for recommender systems is developed. Розроблено адаптивний алгоритм кластеризації для рекомендаційних систем.

  14. Nonuniform Sparse Data Clustering Cascade Algorithm Based on Dynamic Cumulative Entropy

    Directory of Open Access Journals (Sweden)

    Ning Li

    2016-01-01

    Full Text Available A small amount of prior knowledge and randomly chosen initial cluster centers have a direct impact on the accuracy of the performance of iterative clustering algorithm. In this paper we propose a new algorithm to compute initial cluster centers for k-means clustering and the best number of the clusters with little prior knowledge and optimize clustering result. It constructs the Euclidean distance control factor based on aggregation density sparse degree to select the initial cluster center of nonuniform sparse data and obtains initial data clusters by multidimensional diffusion density distribution. Multiobjective clustering approach based on dynamic cumulative entropy is adopted to optimize the initial data clusters and the best number of the clusters. The experimental results show that the newly proposed algorithm has good performance to obtain the initial cluster centers for the k-means algorithm and it effectively improves the clustering accuracy of nonuniform sparse data by about 5%.

  15. A multi-objective Pareto ant colony algorithm for the Multi-Depot Vehicle Routing problem with Backhauls

    Directory of Open Access Journals (Sweden)

    Jhon Jairo Santa Chávez

    2016-01-01

    Full Text Available This paper presents a multiobjective ant colony algorithm for the Multi-Depot Vehicle Routing Problem with Backhauls (MDVRPB where three objectives of traveled distance, traveling times and total consumption of energy are minimized. An ant colony algorithm is proposed to solve the MDVRPB. The solution scheme allows one to find a set of ordered solutions in Pareto fronts by considering the concept of dominance. The effectiveness of the proposed approach is examined by considering a set of instances adapted from the literature. The computational results show high quality results within short computing times.

  16. Bus Stops Location and Bus Route Planning Using Mean Shift Clustering and Ant Colony in West Jakarta

    Science.gov (United States)

    Supangat, Kenny; Eko Soelistio, Yustinus

    2017-03-01

    Traffic Jam has been a daily problem for people in Jakarta which is one of the busiest city in Indonesia up until now. Even though the official government has tried to reduce the impact of traffic issues by developing a new public transportation which takes up a lot of resources and time, it failed to diminish the problem. The actual concern to this problem actually lies in how people move between places in Jakarta where they always using their own vehicle like cars, and motorcycles that fill most of the street in Jakarta. Among much other public transportations that roams the street of Jakarta, Buses is believed to be an efficient transportation that can move many people at once. However, the location of the bus stop is now have moved to the middle of the main road, and its too far for the nearby residence to access to it. This paper proposes an optimal location of optimal bus stops in West Jakarta that is experimentally proven to have a maximal distance of 350 m. The optimal location is estimated by means of mean shift clustering method while the optimal routes are calculated using Ant Colony algorithm. The bus stops locations rate of error is 0.07% with overall route area of 32 km. Based on our experiments, we believe our proposed bus stop plan can be an interesting alternative to reduce traffic congestion in West Jakarta.

  17. A cluster analysis on road traffic accidents using genetic algorithms

    Science.gov (United States)

    Saharan, Sabariah; Baragona, Roberto

    2017-04-01

    The analysis of traffic road accidents is increasingly important because of the accidents cost and public road safety. The availability or large data sets makes the study of factors that affect the frequency and severity accidents are viable. However, the data are often highly unbalanced and overlapped. We deal with the data set of the road traffic accidents recorded in Christchurch, New Zealand, from 2000-2009 with a total of 26440 accidents. The data is in a binary set and there are 50 factors road traffic accidents with four level of severity. We used genetic algorithm for the analysis because we are in the presence of a large unbalanced data set and standard clustering like k-means algorithm may not be suitable for the task. The genetic algorithm based on clustering for unknown K, (GCUK) has been used to identify the factors associated with accidents of different levels of severity. The results provided us with an interesting insight into the relationship between factors and accidents severity level and suggest that the two main factors that contributes to fatal accidents are "Speed greater than 60 km h" and "Did not see other people until it was too late". A comparison with the k-means algorithm and the independent component analysis is performed to validate the results.

  18. Community Clustering Algorithm in Complex Networks Based on Microcommunity Fusion

    Directory of Open Access Journals (Sweden)

    Jin Qi

    2015-01-01

    Full Text Available With the further research on physical meaning and digital features of the community structure in complex networks in recent years, the improvement of effectiveness and efficiency of the community mining algorithms in complex networks has become an important subject in this area. This paper puts forward a concept of the microcommunity and gets final mining results of communities through fusing different microcommunities. This paper starts with the basic definition of the network community and applies Expansion to the microcommunity clustering which provides prerequisites for the microcommunity fusion. The proposed algorithm is more efficient and has higher solution quality compared with other similar algorithms through the analysis of test results based on network data set.

  19. An improved clustering algorithm based on reverse learning in intelligent transportation

    Science.gov (United States)

    Qiu, Guoqing; Kou, Qianqian; Niu, Ting

    2017-05-01

    With the development of artificial intelligence and data mining technology, big data has gradually entered people's field of vision. In the process of dealing with large data, clustering is an important processing method. By introducing the reverse learning method in the clustering process of PAM clustering algorithm, to further improve the limitations of one-time clustering in unsupervised clustering learning, and increase the diversity of clustering clusters, so as to improve the quality of clustering. The algorithm analysis and experimental results show that the algorithm is feasible.

  20. Clustering Algorithms: Their Application to Gene Expression Data.

    Science.gov (United States)

    Oyelade, Jelili; Isewon, Itunuoluwa; Oladipupo, Funke; Aromolaran, Olufemi; Uwoghiren, Efosa; Ameh, Faridah; Achas, Moses; Adebiyi, Ezekiel

    2016-01-01

    Gene expression data hide vital information required to understand the biological process that takes place in a particular organism in relation to its environment. Deciphering the hidden patterns in gene expression data proffers a prodigious preference to strengthen the understanding of functional genomics. The complexity of biological networks and the volume of genes present increase the challenges of comprehending and interpretation of the resulting mass of data, which consists of millions of measurements; these data also inhibit vagueness, imprecision, and noise. Therefore, the use of clustering techniques is a first step toward addressing these challenges, which is essential in the data mining process to reveal natural structures and identify interesting patterns in the underlying data. The clustering of gene expression data has been proven to be useful in making known the natural structure inherent in gene expression data, understanding gene functions, cellular processes, and subtypes of cells, mining useful information from noisy data, and understanding gene regulation. The other benefit of clustering gene expression data is the identification of homology, which is very important in vaccine design. This review examines the various clustering algorithms applicable to the gene expression data in order to discover and provide useful knowledge of the appropriate clustering technique that will guarantee stability and high degree of accuracy in its analysis procedure.

  1. Finding reproducible cluster partitions for the k-means algorithm.

    Science.gov (United States)

    Lisboa, Paulo J G; Etchells, Terence A; Jarman, Ian H; Chambers, Simon J

    2013-01-01

    K-means clustering is widely used for exploratory data analysis. While its dependence on initialisation is well-known, it is common practice to assume that the partition with lowest sum-of-squares (SSQ) total i.e. within cluster variance, is both reproducible under repeated initialisations and also the closest that k-means can provide to true structure, when applied to synthetic data. We show that this is generally the case for small numbers of clusters, but for values of k that are still of theoretical and practical interest, similar values of SSQ can correspond to markedly different cluster partitions. This paper extends stability measures previously presented in the context of finding optimal values of cluster number, into a component of a 2-d map of the local minima found by the k-means algorithm, from which not only can values of k be identified for further analysis but, more importantly, it is made clear whether the best SSQ is a suitable solution or whether obtaining a consistently good partition requires further application of the stability index. The proposed method is illustrated by application to five synthetic datasets replicating a real world breast cancer dataset with varying data density, and a large bioinformatics dataset.

  2. Proposed algorithm to improve job shop production scheduling using ant colony optimization method

    Science.gov (United States)

    Pakpahan, Eka KA; Kristina, Sonna; Setiawan, Ari

    2017-12-01

    This paper deals with the determination of job shop production schedule on an automatic environment. On this particular environment, machines and material handling system are integrated and controlled by a computer center where schedule were created and then used to dictate the movement of parts and the operations at each machine. This setting is usually designed to have an unmanned production process for a specified interval time. We consider here parts with various operations requirement. Each operation requires specific cutting tools. These parts are to be scheduled on machines each having identical capability, meaning that each machine is equipped with a similar set of cutting tools therefore is capable of processing any operation. The availability of a particular machine to process a particular operation is determined by the remaining life time of its cutting tools. We proposed an algorithm based on the ant colony optimization method and embedded them on matlab software to generate production schedule which minimize the total processing time of the parts (makespan). We test the algorithm on data provided by real industry and the process shows a very short computation time. This contributes a lot to the flexibility and timelines targeted on an automatic environment.

  3. Solving optimum operation of single pump unit problem with ant colony optimization (ACO) algorithm

    International Nuclear Information System (INIS)

    Yuan, Y; Liu, C

    2012-01-01

    For pumping stations, the effective scheduling of daily pump operations from solutions to the optimum design operation problem is one of the greatest potential areas for energy cost-savings, there are some difficulties in solving this problem with traditional optimization methods due to the multimodality of the solution region. In this case, an ACO model for optimum operation of pumping unit is proposed and the solution method by ants searching is presented by rationally setting the object function and constrained conditions. A weighted directed graph was constructed and feasible solutions may be found by iteratively searching of artificial ants, and then the optimal solution can be obtained by applying the rule of state transition and the pheromone updating. An example calculation was conducted and the minimum cost was found as 4.9979. The result of ant colony algorithm was compared with the result from dynamic programming or evolutionary solving method in commercial software under the same discrete condition. The result of ACO is better and the computing time is shorter which indicates that ACO algorithm can provide a high application value to the field of optimal operation of pumping stations and related fields.

  4. An Improved Artificial Colony Algorithm Model for Forecasting Chinese Electricity Consumption and Analyzing Effect Mechanism

    Directory of Open Access Journals (Sweden)

    Jingmin Wang

    2016-01-01

    Full Text Available Electricity consumption forecast is perceived to be a growing hot topic in such a situation that China’s economy has entered a period of new normal and the demand of electric power has slowed down. Therefore, exploring Chinese electricity consumption influence mechanism and forecasting electricity consumption are crucial to formulate electrical energy plan scientifically and guarantee the sustainable economic and social development. Research has identified medium and long term electricity consumption forecast as a difficult study influenced by various factors. This paper proposed an improved Artificial Bee Colony (ABC algorithm which combined with multivariate linear regression (MLR for exploring the influencing mechanism of various factors on Chinese electricity consumption and forecasting electricity consumption in the future. The results indicated that the improved ABC algorithm in view of the various factors is superior to traditional models just considering unilateralism in accuracy and persuasion. The overall findings cast light on this model which provides a new scientific and effective way to forecast the medium and long term electricity consumption.

  5. Depth data research of GIS based on clustering analysis algorithm

    Science.gov (United States)

    Xiong, Yan; Xu, Wenli

    2018-03-01

    The data of GIS have spatial distribution. Geographic data has both spatial characteristics and attribute characteristics, and also changes with time. Therefore, the amount of data is very large. Nowadays, many industries and departments in the society are using GIS. However, without proper data analysis and mining scheme, GIS will not exert its maximum effectiveness and will waste a lot of data. In this paper, we use the geographic information demand of a national security department as the experimental object, combining the characteristics of GIS data, taking into account the characteristics of time, space, attributes and so on, and using cluster analysis algorithm. We further study the mining scheme for depth data, and get the algorithm model. This algorithm can automatically classify sample data, and then carry out exploratory analysis. The research shows that the algorithm model and the information mining scheme can quickly find hidden depth information from the surface data of GIS, thus improving the efficiency of the security department. This algorithm can also be extended to other fields.

  6. Estimates of hydroelectric generation using neural networks with the artificial bee colony algorithm for Turkey

    International Nuclear Information System (INIS)

    Uzlu, Ergun; Akpınar, Adem; Özturk, Hasan Tahsin; Nacar, Sinan; Kankal, Murat

    2014-01-01

    The primary objective of this study was to apply the ANN (artificial neural network) model with the ABC (artificial bee colony) algorithm to estimate annual hydraulic energy production of Turkey. GEED (gross electricity energy demand), population, AYT (average yearly temperature), and energy consumption were selected as independent variables in the model. The first part of the study compared ANN-ABC model performance with results of classical ANN models trained with the BP (back propagation) algorithm. Mean square and relative error were applied to evaluate model accuracy. The test set errors emphasized positive differences between the ANN-ABC and classical ANN models. After determining optimal configurations, three different scenarios were developed to predict future hydropower generation values for Turkey. Results showed the ANN-ABC method predicted hydroelectric generation better than the classical ANN trained with the BP algorithm. Furthermore, results indicated future hydroelectric generation in Turkey will range from 69.1 to 76.5 TWh in 2021, and the total annual electricity demand represented by hydropower supply rates will range from 14.8% to 18.0%. However, according to Vision 2023 agenda goals, the country plans to produce 30% of its electricity demand from renewable energy sources by 2023, and use 20% less energy than in 2010. This percentage renewable energy provision cannot be accomplished unless changes in energy policy and investments are not addressed and implemented. In order to achieve this goal, the Turkish government must reconsider and raise its own investments in hydropower, wind, solar, and geothermal energy, particularly hydropower. - Highlights: • This study is associated with predicting hydropower generation in Turkey. • Sensitivity analysis was performed to determine predictor variables. • GEED, population, energy consumption and AYT were used as predictor variables. • ANN-ABC predicted the hydropower generation more accurately

  7. Scalable clustering algorithms for continuous environmental flow cytometry.

    Science.gov (United States)

    Hyrkas, Jeremy; Clayton, Sophie; Ribalet, Francois; Halperin, Daniel; Armbrust, E Virginia; Howe, Bill

    2016-02-01

    Recent technological innovations in flow cytometry now allow oceanographers to collect high-frequency flow cytometry data from particles in aquatic environments on a scale far surpassing conventional flow cytometers. The SeaFlow cytometer continuously profiles microbial phytoplankton populations across thousands of kilometers of the surface ocean. The data streams produced by instruments such as SeaFlow challenge the traditional sample-by-sample approach in cytometric analysis and highlight the need for scalable clustering algorithms to extract population information from these large-scale, high-frequency flow cytometers. We explore how available algorithms commonly used for medical applications perform at classification of such a large-scale, environmental flow cytometry data. We apply large-scale Gaussian mixture models to massive datasets using Hadoop. This approach outperforms current state-of-the-art cytometry classification algorithms in accuracy and can be coupled with manual or automatic partitioning of data into homogeneous sections for further classification gains. We propose the Gaussian mixture model with partitioning approach for classification of large-scale, high-frequency flow cytometry data. Source code available for download at https://github.com/jhyrkas/seaflow_cluster, implemented in Java for use with Hadoop. hyrkas@cs.washington.edu Supplementary data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  8. Gravitation field algorithm and its application in gene cluster

    Directory of Open Access Journals (Sweden)

    Zheng Ming

    2010-09-01

    Full Text Available Abstract Background Searching optima is one of the most challenging tasks in clustering genes from available experimental data or given functions. SA, GA, PSO and other similar efficient global optimization methods are used by biotechnologists. All these algorithms are based on the imitation of natural phenomena. Results This paper proposes a novel searching optimization algorithm called Gravitation Field Algorithm (GFA which is derived from the famous astronomy theory Solar Nebular Disk Model (SNDM of planetary formation. GFA simulates the Gravitation field and outperforms GA and SA in some multimodal functions optimization problem. And GFA also can be used in the forms of unimodal functions. GFA clusters the dataset well from the Gene Expression Omnibus. Conclusions The mathematical proof demonstrates that GFA could be convergent in the global optimum by probability 1 in three conditions for one independent variable mass functions. In addition to these results, the fundamental optimization concept in this paper is used to analyze how SA and GA affect the global search and the inherent defects in SA and GA. Some results and source code (in Matlab are publicly available at http://ccst.jlu.edu.cn/CSBG/GFA.

  9. An artificial bee colony algorithm for the capacitated vehicle routing problem

    DEFF Research Database (Denmark)

    Szeto, W.Y.; Wu, Yongzhong; Ho, Sin C.

    2011-01-01

    This paper introduces an artificial bee colony heuristic for solving the capacitated vehicle routing problem. The artificial bee colony heuristic is a swarm-based heuristic, which mimics the foraging behavior of a honey bee swarm. An enhanced version of the artificial bee colony heuristic is also...

  10. Development of Automatic Cluster Algorithm for Microcalcification in Digital Mammography

    Energy Technology Data Exchange (ETDEWEB)

    Choi, Seok Yoon [Dept. of Medical Engineering, Korea University, Seoul (Korea, Republic of); Kim, Chang Soo [Dept. of Radiological Science, College of Health Sciences, Catholic University of Pusan, Pusan (Korea, Republic of)

    2009-03-15

    Digital Mammography is an efficient imaging technique for the detection and diagnosis of breast pathological disorders. Six mammographic criteria such as number of cluster, number, size, extent and morphologic shape of microcalcification, and presence of mass, were reviewed and correlation with pathologic diagnosis were evaluated. It is very important to find breast cancer early when treatment can reduce deaths from breast cancer and breast incision. In screening breast cancer, mammography is typically used to view the internal organization. Clusterig microcalcifications on mammography represent an important feature of breast mass, especially that of intraductal carcinoma. Because microcalcification has high correlation with breast cancer, a cluster of a microcalcification can be very helpful for the clinical doctor to predict breast cancer. For this study, three steps of quantitative evaluation are proposed : DoG filter, adaptive thresholding, Expectation maximization. Through the proposed algorithm, each cluster in the distribution of microcalcification was able to measure the number calcification and length of cluster also can be used to automatically diagnose breast cancer as indicators of the primary diagnosis.

  11. Classification of posture maintenance data with fuzzy clustering algorithms

    Science.gov (United States)

    Bezdek, James C.

    1992-01-01

    Sensory inputs from the visual, vestibular, and proprioreceptive systems are integrated by the central nervous system to maintain postural equilibrium. Sustained exposure to microgravity causes neurosensory adaptation during spaceflight, which results in decreased postural stability until readaptation occurs upon return to the terrestrial environment. Data which simulate sensory inputs under various sensory organization test (SOT) conditions were collected in conjunction with Johnson Space Center postural control studies using a tilt-translation device (TTD). The University of West Florida applied the fuzzy c-meams (FCM) clustering algorithms to this data with a view towards identifying various states and stages of subjects experiencing such changes. Feature analysis, time step analysis, pooling data, response of the subjects, and the algorithms used are discussed.

  12. Optimum Layout for Sensors in Water Distribution Networks through Ant Colony Algorithm: A Dual Use Vision

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    Seyed Mehdi Miri

    2014-07-01

    Full Text Available The accidental or intentional entry of contaminants or self-deterioration of the water quality within the network itself can severely harm public health. Efficient water quality monitoring is one of the most important tools to guarantee a reliable potable water supply to consumers of drinking water distribution systems. Considering the high purchase, installation and maintenance cost of sensors in water distribution networks deploying two independent sensor networks within one distribution system is not only bounded by physical constraints but also is not a cost-effective approach. Therefore, need for combining different objectives and designing sensor network to simultaneity satisfying these objectives is felt. Sensors should comply with dual use benefits. Sensor locations and types should be integrated not only for achieving water security goals but also for accomplishing other water utility objectives, such as satisfying regulatory monitoring requirements or collecting information to solve water quality problems. In this study, a dual use vision for the sensor layout problem in the municipal water networks, is formulated and solved with the ant colony algorithm.

  13. Artificial Bee Colony Algorithm Combined with Grenade Explosion Method and Cauchy Operator for Global Optimization

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    Jian-Guo Zheng

    2015-01-01

    Full Text Available Artificial bee colony (ABC algorithm is a popular swarm intelligence technique inspired by the intelligent foraging behavior of honey bees. However, ABC is good at exploration but poor at exploitation and its convergence speed is also an issue in some cases. To improve the performance of ABC, a novel ABC combined with grenade explosion method (GEM and Cauchy operator, namely, ABCGC, is proposed. GEM is embedded in the onlooker bees’ phase to enhance the exploitation ability and accelerate convergence of ABCGC; meanwhile, Cauchy operator is introduced into the scout bees’ phase to help ABCGC escape from local optimum and further enhance its exploration ability. Two sets of well-known benchmark functions are used to validate the better performance of ABCGC. The experiments confirm that ABCGC is significantly superior to ABC and other competitors; particularly it converges to the global optimum faster in most cases. These results suggest that ABCGC usually achieves a good balance between exploitation and exploration and can effectively serve as an alternative for global optimization.

  14. Meta-Heuristics in Short Scale Construction: Ant Colony Optimization and Genetic Algorithm.

    Science.gov (United States)

    Schroeders, Ulrich; Wilhelm, Oliver; Olaru, Gabriel

    2016-01-01

    The advent of large-scale assessment, but also the more frequent use of longitudinal and multivariate approaches to measurement in psychological, educational, and sociological research, caused an increased demand for psychometrically sound short scales. Shortening scales economizes on valuable administration time, but might result in inadequate measures because reducing an item set could: a) change the internal structure of the measure, b) result in poorer reliability and measurement precision, c) deliver measures that cannot effectively discriminate between persons on the intended ability spectrum, and d) reduce test-criterion relations. Different approaches to abbreviate measures fare differently with respect to the above-mentioned problems. Therefore, we compare the quality and efficiency of three item selection strategies to derive short scales from an existing long version: a Stepwise COnfirmatory Factor Analytical approach (SCOFA) that maximizes factor loadings and two metaheuristics, specifically an Ant Colony Optimization (ACO) with a tailored user-defined optimization function and a Genetic Algorithm (GA) with an unspecific cost-reduction function. SCOFA compiled short versions were highly reliable, but had poor validity. In contrast, both metaheuristics outperformed SCOFA and produced efficient and psychometrically sound short versions (unidimensional, reliable, sensitive, and valid). We discuss under which circumstances ACO and GA produce equivalent results and provide recommendations for conditions in which it is advisable to use a metaheuristic with an unspecific out-of-the-box optimization function.

  15. Monte Carlo simulation using the PENELOPE code with an ant colony algorithm to study MOSFET detectors

    Energy Technology Data Exchange (ETDEWEB)

    Carvajal, M A; Palma, A J [Departamento de Electronica y Tecnologia de Computadores, Universidad de Granada, E-18071 Granada (Spain); Garcia-Pareja, S [Servicio de Radiofisica Hospitalaria, Hospital Regional Universitario ' Carlos Haya' , Avda Carlos Haya, s/n, E-29010 Malaga (Spain); Guirado, D [Servicio de RadiofIsica, Hospital Universitario ' San Cecilio' , Avda Dr Oloriz, 16, E-18012 Granada (Spain); Vilches, M [Servicio de Fisica y Proteccion Radiologica, Hospital Regional Universitario ' Virgen de las Nieves' , Avda Fuerzas Armadas, 2, E-18014 Granada (Spain); Anguiano, M; Lallena, A M [Departamento de Fisica Atomica, Molecular y Nuclear, Universidad de Granada, E-18071 Granada (Spain)], E-mail: carvajal@ugr.es, E-mail: garciapareja@gmail.com, E-mail: dguirado@ugr.es, E-mail: mvilches@ugr.es, E-mail: mangui@ugr.es, E-mail: ajpalma@ugr.es, E-mail: lallena@ugr.es

    2009-10-21

    In this work we have developed a simulation tool, based on the PENELOPE code, to study the response of MOSFET devices to irradiation with high-energy photons. The energy deposited in the extremely thin silicon dioxide layer has been calculated. To reduce the statistical uncertainties, an ant colony algorithm has been implemented to drive the application of splitting and Russian roulette as variance reduction techniques. In this way, the uncertainty has been reduced by a factor of {approx}5, while the efficiency is increased by a factor of above 20. As an application, we have studied the dependence of the response of the pMOS transistor 3N163, used as a dosimeter, with the incidence angle of the radiation for three common photons sources used in radiotherapy: a {sup 60}Co Theratron-780 and the 6 and 18 MV beams produced by a Mevatron KDS LINAC. Experimental and simulated results have been obtained for gantry angles of 0 deg., 15 deg., 30 deg., 45 deg., 60 deg. and 75 deg. The agreement obtained has permitted validation of the simulation tool. We have studied how to reduce the angular dependence of the MOSFET response by using an additional encapsulation made of brass in the case of the two LINAC qualities considered.

  16. Simulated Annealing-Based Ant Colony Algorithm for Tugboat Scheduling Optimization

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    Qi Xu

    2012-01-01

    Full Text Available As the “first service station” for ships in the whole port logistics system, the tugboat operation system is one of the most important systems in port logistics. This paper formulated the tugboat scheduling problem as a multiprocessor task scheduling problem (MTSP after analyzing the characteristics of tugboat operation. The model considers factors of multianchorage bases, different operation modes, and three stages of operations (berthing/shifting-berth/unberthing. The objective is to minimize the total operation times for all tugboats in a port. A hybrid simulated annealing-based ant colony algorithm is proposed to solve the addressed problem. By the numerical experiments without the shifting-berth operation, the effectiveness was verified, and the fact that more effective sailing may be possible if tugboats return to the anchorage base timely was pointed out; by the experiments with the shifting-berth operation, one can see that the objective is most sensitive to the proportion of the shifting-berth operation, influenced slightly by the tugboat deployment scheme, and not sensitive to the handling operation times.

  17. A Heuristic Task Scheduling Algorithm for Heterogeneous Virtual Clusters

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    Weiwei Lin

    2016-01-01

    Full Text Available Cloud computing provides on-demand computing and storage services with high performance and high scalability. However, the rising energy consumption of cloud data centers has become a prominent problem. In this paper, we first introduce an energy-aware framework for task scheduling in virtual clusters. The framework consists of a task resource requirements prediction module, an energy estimate module, and a scheduler with a task buffer. Secondly, based on this framework, we propose a virtual machine power efficiency-aware greedy scheduling algorithm (VPEGS. As a heuristic algorithm, VPEGS estimates task energy by considering factors including task resource demands, VM power efficiency, and server workload before scheduling tasks in a greedy manner. We simulated a heterogeneous VM cluster and conducted experiment to evaluate the effectiveness of VPEGS. Simulation results show that VPEGS effectively reduced total energy consumption by more than 20% without producing large scheduling overheads. With the similar heuristic ideology, it outperformed Min-Min and RASA with respect to energy saving by about 29% and 28%, respectively.

  18. Ternary alloy material prediction using genetic algorithm and cluster expansion

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Chong [Iowa State Univ., Ames, IA (United States)

    2015-12-01

    This thesis summarizes our study on the crystal structures prediction of Fe-V-Si system using genetic algorithm and cluster expansion. Our goal is to explore and look for new stable compounds. We started from the current ten known experimental phases, and calculated formation energies of those compounds using density functional theory (DFT) package, namely, VASP. The convex hull was generated based on the DFT calculations of the experimental known phases. Then we did random search on some metal rich (Fe and V) compositions and found that the lowest energy structures were body centered cube (bcc) underlying lattice, under which we did our computational systematic searches using genetic algorithm and cluster expansion. Among hundreds of the searched compositions, thirteen were selected and DFT formation energies were obtained by VASP. The stability checking of those thirteen compounds was done in reference to the experimental convex hull. We found that the composition, 24-8-16, i.e., Fe3VSi2 is a new stable phase and it can be very inspiring to the future experiments.

  19. An enhanced artificial bee colony algorithm (EABC for solving dispatching of hydro-thermal system (DHTS problem.

    Directory of Open Access Journals (Sweden)

    Yi Yu

    Full Text Available The dispatching of hydro-thermal system is a nonlinear programming problem with multiple constraints and high dimensions and the solution techniques of the model have been a hotspot in research. Based on the advantage of that the artificial bee colony algorithm (ABC can efficiently solve the high-dimensional problem, an improved artificial bee colony algorithm has been proposed to solve DHTS problem in this paper. The improvements of the proposed algorithm include two aspects. On one hand, local search can be guided in efficiency by the information of the global optimal solution and its gradient in each generation. The global optimal solution improves the search efficiency of the algorithm but loses diversity, while the gradient can weaken the loss of diversity caused by the global optimal solution. On the other hand, inspired by genetic algorithm, the nectar resource which has not been updated in limit generation is transformed to a new one by using selection, crossover and mutation, which can ensure individual diversity and make full use of prior information for improving the global search ability of the algorithm. The two improvements of ABC algorithm are proved to be effective via a classical numeral example at last. Among which the genetic operator for the promotion of the ABC algorithm's performance is significant. The results are also compared with those of other state-of-the-art algorithms, the enhanced ABC algorithm has general advantages in minimum cost, average cost and maximum cost which shows its usability and effectiveness. The achievements in this paper provide a new method for solving the DHTS problems, and also offer a novel reference for the improvement of mechanism and the application of algorithms.

  20. jClustering, an open framework for the development of 4D clustering algorithms.

    Directory of Open Access Journals (Sweden)

    José María Mateos-Pérez

    Full Text Available We present jClustering, an open framework for the design of clustering algorithms in dynamic medical imaging. We developed this tool because of the difficulty involved in manually segmenting dynamic PET images and the lack of availability of source code for published segmentation algorithms. Providing an easily extensible open tool encourages publication of source code to facilitate the process of comparing algorithms and provide interested third parties with the opportunity to review code. The internal structure of the framework allows an external developer to implement new algorithms easily and quickly, focusing only on the particulars of the method being implemented and not on image data handling and preprocessing. This tool has been coded in Java and is presented as an ImageJ plugin in order to take advantage of all the functionalities offered by this imaging analysis platform. Both binary packages and source code have been published, the latter under a free software license (GNU General Public License to allow modification if necessary.

  1. Active Semisupervised Clustering Algorithm with Label Propagation for Imbalanced and Multidensity Datasets

    Directory of Open Access Journals (Sweden)

    Mingwei Leng

    2013-01-01

    Full Text Available The accuracy of most of the existing semisupervised clustering algorithms based on small size of labeled dataset is low when dealing with multidensity and imbalanced datasets, and labeling data is quite expensive and time consuming in many real-world applications. This paper focuses on active data selection and semisupervised clustering algorithm in multidensity and imbalanced datasets and proposes an active semisupervised clustering algorithm. The proposed algorithm uses an active mechanism for data selection to minimize the amount of labeled data, and it utilizes multithreshold to expand labeled datasets on multidensity and imbalanced datasets. Three standard datasets and one synthetic dataset are used to demonstrate the proposed algorithm, and the experimental results show that the proposed semisupervised clustering algorithm has a higher accuracy and a more stable performance in comparison to other clustering and semisupervised clustering algorithms, especially when the datasets are multidensity and imbalanced.

  2. A hybrid expert system, clustering and ant colony optimization approach for scheduling and routing problem in courier services

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    Eduyn López-Santana

    2018-10-01

    Full Text Available This paper focuses on the problem of scheduling and routing workers in a courier service to deliver packages for a set of geographically distributed customers and, on a specific date and time window. The crew of workers has a limited capacity and a time window that represents their labor length. The problem deals with a combination of multiples variants of the vehicle routing problem as capacity, multiple periods, time windows, due dates and distance as constraints. Since in the courier services the demands could be of hundreds or thousands of packages to be delivered, the problem is computationally unmanageable. We present a three-phase solution approach. In the first phase, a scheduling model determines the visit date for each customer in the planning horizon by considering the release date, due date to visit and travel times. We use an expert system based on the know-how of the courier service, which uses an inference engine that works as a rule interpreter. In the second phase, a clustering model assigns, for each period, customers to workers according to the travel times, maximum load capacity and customer’s time windows. We use a centroid based and sweep algorithms to solve the resulted problem. Finally, in the third phase, a routing model finds the order in which each worker will visit all customers taking into account their time windows and worker’s available time. To solve the routing problem we use an Ant Colony Optimization metaheuristic. We present some numerical results using a case study, in which the proposed method of this paper finds better results in comparison with the current method used in the case study

  3. An improved artificial bee colony algorithm based on balance-evolution strategy for unmanned combat aerial vehicle path planning.

    Science.gov (United States)

    Li, Bai; Gong, Li-gang; Yang, Wen-lun

    2014-01-01

    Unmanned combat aerial vehicles (UCAVs) have been of great interest to military organizations throughout the world due to their outstanding capabilities to operate in dangerous or hazardous environments. UCAV path planning aims to obtain an optimal flight route with the threats and constraints in the combat field well considered. In this work, a novel artificial bee colony (ABC) algorithm improved by a balance-evolution strategy (BES) is applied in this optimization scheme. In this new algorithm, convergence information during the iteration is fully utilized to manipulate the exploration/exploitation accuracy and to pursue a balance between local exploitation and global exploration capabilities. Simulation results confirm that BE-ABC algorithm is more competent for the UCAV path planning scheme than the conventional ABC algorithm and two other state-of-the-art modified ABC algorithms.

  4. An Improved Artificial Bee Colony Algorithm Based on Balance-Evolution Strategy for Unmanned Combat Aerial Vehicle Path Planning

    Directory of Open Access Journals (Sweden)

    Bai Li

    2014-01-01

    Full Text Available Unmanned combat aerial vehicles (UCAVs have been of great interest to military organizations throughout the world due to their outstanding capabilities to operate in dangerous or hazardous environments. UCAV path planning aims to obtain an optimal flight route with the threats and constraints in the combat field well considered. In this work, a novel artificial bee colony (ABC algorithm improved by a balance-evolution strategy (BES is applied in this optimization scheme. In this new algorithm, convergence information during the iteration is fully utilized to manipulate the exploration/exploitation accuracy and to pursue a balance between local exploitation and global exploration capabilities. Simulation results confirm that BE-ABC algorithm is more competent for the UCAV path planning scheme than the conventional ABC algorithm and two other state-of-the-art modified ABC algorithms.

  5. The application of mixed recommendation algorithm with user clustering in the microblog advertisements promotion

    Science.gov (United States)

    Gong, Lina; Xu, Tao; Zhang, Wei; Li, Xuhong; Wang, Xia; Pan, Wenwen

    2017-03-01

    The traditional microblog recommendation algorithm has the problems of low efficiency and modest effect in the era of big data. In the aim of solving these issues, this paper proposed a mixed recommendation algorithm with user clustering. This paper first introduced the situation of microblog marketing industry. Then, this paper elaborates the user interest modeling process and detailed advertisement recommendation methods. Finally, this paper compared the mixed recommendation algorithm with the traditional classification algorithm and mixed recommendation algorithm without user clustering. The results show that the mixed recommendation algorithm with user clustering has good accuracy and recall rate in the microblog advertisements promotion.

  6. PinaColada: peptide-inhibitor ant colony ad-hoc design algorithm.

    Science.gov (United States)

    Zaidman, Daniel; Wolfson, Haim J

    2016-08-01

    Design of protein-protein interaction (PPI) inhibitors is a major challenge in Structural Bioinformatics. Peptides, especially short ones (5-15 amino acid long), are natural candidates for inhibition of protein-protein complexes due to several attractive features such as high structural compatibility with the protein binding site (mimicking the surface of one of the proteins), small size and the ability to form strong hotspot binding connections with the protein surface. Efficient rational peptide design is still a major challenge in computer aided drug design, due to the huge space of possible sequences, which is exponential in the length of the peptide, and the high flexibility of peptide conformations. In this article we present PinaColada, a novel computational method for the design of peptide inhibitors for protein-protein interactions. We employ a version of the ant colony optimization heuristic, which is used to explore the exponential space ([Formula: see text]) of length n peptide sequences, in combination with our fast robotics motivated PepCrawler algorithm, which explores the conformational space for each candidate sequence. PinaColada is being run in parallel, on a DELL PowerEdge 2.8 GHZ computer with 20 cores and 256 GB memory, and takes up to 24 h to design a peptide of 5-15 amino acids length. An online server available at: http://bioinfo3d.cs.tau.ac.il/PinaColada/. danielza@post.tau.ac.il; wolfson@tau.ac.il. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  7. Clustering for Binary Data Sets by Using Genetic Algorithm-Incremental K-means

    Science.gov (United States)

    Saharan, S.; Baragona, R.; Nor, M. E.; Salleh, R. M.; Asrah, N. M.

    2018-04-01

    This research was initially driven by the lack of clustering algorithms that specifically focus in binary data. To overcome this gap in knowledge, a promising technique for analysing this type of data became the main subject in this research, namely Genetic Algorithms (GA). For the purpose of this research, GA was combined with the Incremental K-means (IKM) algorithm to cluster the binary data streams. In GAIKM, the objective function was based on a few sufficient statistics that may be easily and quickly calculated on binary numbers. The implementation of IKM will give an advantage in terms of fast convergence. The results show that GAIKM is an efficient and effective new clustering algorithm compared to the clustering algorithms and to the IKM itself. In conclusion, the GAIKM outperformed other clustering algorithms such as GCUK, IKM, Scalable K-means (SKM) and K-means clustering and paves the way for future research involving missing data and outliers.

  8. An Affinity Propagation Clustering Algorithm for Mixed Numeric and Categorical Datasets

    Directory of Open Access Journals (Sweden)

    Kang Zhang

    2014-01-01

    Full Text Available Clustering has been widely used in different fields of science, technology, social science, and so forth. In real world, numeric as well as categorical features are usually used to describe the data objects. Accordingly, many clustering methods can process datasets that are either numeric or categorical. Recently, algorithms that can handle the mixed data clustering problems have been developed. Affinity propagation (AP algorithm is an exemplar-based clustering method which has demonstrated good performance on a wide variety of datasets. However, it has limitations on processing mixed datasets. In this paper, we propose a novel similarity measure for mixed type datasets and an adaptive AP clustering algorithm is proposed to cluster the mixed datasets. Several real world datasets are studied to evaluate the performance of the proposed algorithm. Comparisons with other clustering algorithms demonstrate that the proposed method works well not only on mixed datasets but also on pure numeric and categorical datasets.

  9. A fuzzy relational clustering algorithm based on a dissimilarity measure extracted from data.

    Science.gov (United States)

    Corsini, Paolo; Lazzerini, Beatrice; Marcelloni, Francesco

    2004-02-01

    One of the critical aspects of clustering algorithms is the correct identification of the dissimilarity measure used to drive the partitioning of the data set. The dissimilarity measure induces the cluster shape and therefore determines the success of clustering algorithms. As cluster shapes change from a data set to another, dissimilarity measures should be extracted from data. To this aim, we exploit some pairs of points with known dissimilarity value to teach a dissimilarity relation to a feed-forward neural network. Then, we use the neural dissimilarity measure to guide an unsupervised relational clustering algorithm. Experiments on synthetic data sets and on the Iris data set show that the relational clustering algorithm based on the neural dissimilarity outperforms some popular clustering algorithms (with possible partial supervision) based on spatial dissimilarity.

  10. Voltage Profile Enhancement and Reduction of Real Power loss by Hybrid Biogeography Based Artificial Bee Colony algorithm

    Directory of Open Access Journals (Sweden)

    K. Lenin

    2014-04-01

    Full Text Available This paper presents Hybrid Biogeography algorithm for solving the multi-objective reactive power dispatch problem in a power system. Real Power Loss minimization and maximization of voltage stability margin are taken as the objectives. Artificial bee colony optimization (ABC is quick and forceful algorithm for global optimization. Biogeography-Based Optimization (BBO is a new-fangled biogeography inspired algorithm. It mainly utilizes the biogeography-based relocation operator to share the information among solutions. In this work, a hybrid algorithm with BBO and ABC is projected, and named as HBBABC (Hybrid Biogeography based Artificial Bee Colony Optimization, for the universal numerical optimization problem. HBBABC merge the searching behavior of ABC with that of BBO. Both the algorithms have different solution probing tendency like ABC have good exploration probing tendency while BBO have good exploitation probing tendency.  HBBABC used to solve the reactive power dispatch problem and the proposed technique has been tested in standard IEEE30 bus test system.

  11. A new technique based on Artificial Bee Colony Algorithm for optimal sizing of stand-alone photovoltaic system

    Directory of Open Access Journals (Sweden)

    Ahmed F. Mohamed

    2014-05-01

    Full Text Available One of the most recent optimization techniques applied to the optimal design of photovoltaic system to supply an isolated load demand is the Artificial Bee Colony Algorithm (ABC. The proposed methodology is applied to optimize the cost of the PV system including photovoltaic, a battery bank, a battery charger controller, and inverter. Two objective functions are proposed: the first one is the PV module output power which is to be maximized and the second one is the life cycle cost (LCC which is to be minimized. The analysis is performed based on measured solar radiation and ambient temperature measured at Helwan city, Egypt. A comparison between ABC algorithm and Genetic Algorithm (GA optimal results is done. Another location is selected which is Zagazig city to check the validity of ABC algorithm in any location. The ABC is more optimal than GA. The results encouraged the use of the PV systems to electrify the rural sites of Egypt.

  12. A new technique based on Artificial Bee Colony Algorithm for optimal sizing of stand-alone photovoltaic system.

    Science.gov (United States)

    Mohamed, Ahmed F; Elarini, Mahdi M; Othman, Ahmed M

    2014-05-01

    One of the most recent optimization techniques applied to the optimal design of photovoltaic system to supply an isolated load demand is the Artificial Bee Colony Algorithm (ABC). The proposed methodology is applied to optimize the cost of the PV system including photovoltaic, a battery bank, a battery charger controller, and inverter. Two objective functions are proposed: the first one is the PV module output power which is to be maximized and the second one is the life cycle cost (LCC) which is to be minimized. The analysis is performed based on measured solar radiation and ambient temperature measured at Helwan city, Egypt. A comparison between ABC algorithm and Genetic Algorithm (GA) optimal results is done. Another location is selected which is Zagazig city to check the validity of ABC algorithm in any location. The ABC is more optimal than GA. The results encouraged the use of the PV systems to electrify the rural sites of Egypt.

  13. Parallel Genetic Algorithms with Dynamic Topology using Cluster Computing

    Directory of Open Access Journals (Sweden)

    ADAR, N.

    2016-08-01

    Full Text Available A parallel genetic algorithm (PGA conducts a distributed meta-heuristic search by employing genetic algorithms on more than one subpopulation simultaneously. PGAs migrate a number of individuals between subpopulations over generations. The layout that facilitates the interactions of the subpopulations is called the topology. Static migration topologies have been widely incorporated into PGAs. In this article, a PGA with a dynamic migration topology (D-PGA is proposed. D-PGA generates a new migration topology in every epoch based on the average fitness values of the subpopulations. The D-PGA has been tested against ring and fully connected migration topologies in a Beowulf Cluster. The D-PGA has outperformed the ring migration topology with comparable communication cost and has provided competitive or better results than a fully connected migration topology with significantly lower communication cost. PGA convergence behaviors have been analyzed in terms of the diversities within and between subpopulations. Conventional diversity can be considered as the diversity within a subpopulation. A new concept of permeability has been introduced to measure the diversity between subpopulations. It is shown that the success of the proposed D-PGA can be attributed to maintaining a high level of permeability while preserving diversity within subpopulations.

  14. Quantum cluster variational method and message passing algorithms revisited

    Science.gov (United States)

    Domínguez, E.; Mulet, Roberto

    2018-02-01

    We present a general framework to study quantum disordered systems in the context of the Kikuchi's cluster variational method (CVM). The method relies in the solution of message passing-like equations for single instances or in the iterative solution of complex population dynamic algorithms for an average case scenario. We first show how a standard application of the Kikuchi's CVM can be easily translated to message passing equations for specific instances of the disordered system. We then present an "ad hoc" extension of these equations to a population dynamic algorithm representing an average case scenario. At the Bethe level, these equations are equivalent to the dynamic population equations that can be derived from a proper cavity ansatz. However, at the plaquette approximation, the interpretation is more subtle and we discuss it taking also into account previous results in classical disordered models. Moreover, we develop a formalism to properly deal with the average case scenario using a replica-symmetric ansatz within this CVM for quantum disordered systems. Finally, we present and discuss numerical solutions of the different approximations for the quantum transverse Ising model and the quantum random field Ising model in two-dimensional lattices.

  15. Solving the Traveling Salesman Problem Based on The Genetic Reactive Bone Route Algorithm whit Ant Colony System

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    Majid Yousefikhoshbakht

    2016-07-01

    Full Text Available The TSP is considered one of the most well-known combinatorial optimization tasks and researchers have paid so much attention to the TSP for many years. In this problem, a salesman starts to move from an arbitrary place called depot and after visits all of the nodes, finally comes back to the depot. The objective is to minimize the total distance traveled by the salesman.  Because this problem is a non-deterministic polynomial (NP-hard problem in nature, a hybrid meta-heuristic algorithm called REACSGA is used for solving the TSP. In REACSGA, a reactive bone route algorithm that uses the ant colony system (ACS for generating initial diversified solutions and the genetic algorithm (GA as an improved procedure are applied. Since the performance of the Metaheuristic algorithms is significantly influenced by their parameters, Taguchi Method is used to set the parameters of the proposed algorithm. The proposed algorithm is tested on several standard instances involving 24 to 318 nodes from the literature. The computational result shows that the results of the proposed algorithm are competitive with other metaheuristic algorithms for solving the TSP in terms of better quality of solution and computational time respectively. In addition, the proposed REACSGA is significantly efficient and finds closely the best known solutions for most of the instances in which thirteen best known solutions are also found.

  16. A universal optimization strategy for ant colony optimization algorithms based on the Physarum-inspired mathematical model

    International Nuclear Information System (INIS)

    Zhang, Zili; Gao, Chao; Liu, Yuxin; Qian, Tao

    2014-01-01

    Ant colony optimization (ACO) algorithms often fall into the local optimal solution and have lower search efficiency for solving the travelling salesman problem (TSP). According to these shortcomings, this paper proposes a universal optimization strategy for updating the pheromone matrix in the ACO algorithms. The new optimization strategy takes advantages of the unique feature of critical paths reserved in the process of evolving adaptive networks of the Physarum-inspired mathematical model (PMM). The optimized algorithms, denoted as PMACO algorithms, can enhance the amount of pheromone in the critical paths and promote the exploitation of the optimal solution. Experimental results in synthetic and real networks show that the PMACO algorithms are more efficient and robust than the traditional ACO algorithms, which are adaptable to solve the TSP with single or multiple objectives. Meanwhile, we further analyse the influence of parameters on the performance of the PMACO algorithms. Based on these analyses, the best values of these parameters are worked out for the TSP. (paper)

  17. Artificial Bee Colony Algorithm Merged with Pheromone Communication Mechanism for the 0-1 Multidimensional Knapsack Problem

    Directory of Open Access Journals (Sweden)

    Junzhong Ji

    2013-01-01

    Full Text Available Given a set of n objects, the objective of the 0-1 multidimensional knapsack problem (MKP_01 is to find a subset of the object set that maximizes the total profit of the objects in the subset while satisfying m knapsack constraints. In this paper, we have proposed a new artificial bee colony (ABC algorithm for the MKP_01. The new ABC algorithm introduces a novel communication mechanism among bees, which bases on the updating and diffusion of inductive pheromone produced by bees. In a number of experiments and comparisons, our approach obtains better quality solutions in shorter time than the ABC algorithm without the mechanism. We have also compared the solution performance of our approach against some stochastic approaches recently reported in the literature. Computational results demonstrate the superiority of the new ABC approach over all the other approaches.

  18. ADAPTIVE CLUSTER BASED ROUTING PROTOCOL WITH ANT COLONY OPTIMIZATION FOR MOBILE AD-HOC NETWORK IN DISASTER AREA

    Directory of Open Access Journals (Sweden)

    Enrico Budianto

    2012-07-01

    Full Text Available In post-disaster rehabilitation efforts, the availability of telecommunication facilities takes important role. However, the process to improve telecommunication facilities in disaster area is risky if it is done by humans. Therefore, a network method that can work efficiently, effectively, and capable to reach the widest possible area is needed. This research introduces a cluster-based routing protocol named Adaptive Cluster Based Routing Protocol (ACBRP equipped by Ant Colony Optimization method, and its implementation in a simulator developed by author. After data analysis and statistical tests, it can be concluded that routing protocol ACBRP performs better than AODV and DSR routing protocol. Pada upaya rehabilitasi pascabencana, ketersediaan fasilitas telekomunikasi memiliki peranan yang sangat penting. Namun, proses untuk memperbaiki fasilitas telekomunikasi di daerah bencana memiliki resiko jika dilakukan oleh manusia. Oleh karena itu, metode jaringan yang dapat bekerja secara efisien, efektif, dan mampu mencapai area seluas mungkin diperlukan. Penelitian ini memperkenalkan sebuah protokol routing berbasis klaster bernama Adaptive Cluster Based Routing Protocol (ACBRP, yang dilengkapi dengan metode Ant Colony Optimization, dan diimplementasikan pada simulator yang dikembangkan penulis. Setelah data dianalisis dan dilakukan uji statistik, disimpulkan bahwa protokol routing ACBRP beroperasi lebih baik daripada protokol routing AODV maupun DSR.

  19. Higher-spin cluster algorithms: the Heisenberg spin and U(1) quantum link models

    Energy Technology Data Exchange (ETDEWEB)

    Chudnovsky, V

    2000-03-01

    I discuss here how the highly-efficient spin-1/2 cluster algorithm for the Heisenberg antiferromagnet may be extended to higher-dimensional representations; some numerical results are provided. The same extensions can be used for the U(1) flux cluster algorithm, but have not yielded signals of the desired Coulomb phase of the system.

  20. Higher-spin cluster algorithms: the Heisenberg spin and U(1) quantum link models

    International Nuclear Information System (INIS)

    Chudnovsky, V.

    2000-01-01

    I discuss here how the highly-efficient spin-1/2 cluster algorithm for the Heisenberg antiferromagnet may be extended to higher-dimensional representations; some numerical results are provided. The same extensions can be used for the U(1) flux cluster algorithm, but have not yielded signals of the desired Coulomb phase of the system

  1. Study of parameters of the nearest neighbour shared algorithm on clustering documents

    Science.gov (United States)

    Mustika Rukmi, Alvida; Budi Utomo, Daryono; Imro’atus Sholikhah, Neni

    2018-03-01

    Document clustering is one way of automatically managing documents, extracting of document topics and fastly filtering information. Preprocess of clustering documents processed by textmining consists of: keyword extraction using Rapid Automatic Keyphrase Extraction (RAKE) and making the document as concept vector using Latent Semantic Analysis (LSA). Furthermore, the clustering process is done so that the documents with the similarity of the topic are in the same cluster, based on the preprocesing by textmining performed. Shared Nearest Neighbour (SNN) algorithm is a clustering method based on the number of "nearest neighbors" shared. The parameters in the SNN Algorithm consist of: k nearest neighbor documents, ɛ shared nearest neighbor documents and MinT minimum number of similar documents, which can form a cluster. Characteristics The SNN algorithm is based on shared ‘neighbor’ properties. Each cluster is formed by keywords that are shared by the documents. SNN algorithm allows a cluster can be built more than one keyword, if the value of the frequency of appearing keywords in document is also high. Determination of parameter values on SNN algorithm affects document clustering results. The higher parameter value k, will increase the number of neighbor documents from each document, cause similarity of neighboring documents are lower. The accuracy of each cluster is also low. The higher parameter value ε, caused each document catch only neighbor documents that have a high similarity to build a cluster. It also causes more unclassified documents (noise). The higher the MinT parameter value cause the number of clusters will decrease, since the number of similar documents can not form clusters if less than MinT. Parameter in the SNN Algorithm determine performance of clustering result and the amount of noise (unclustered documents ). The Silhouette coeffisient shows almost the same result in many experiments, above 0.9, which means that SNN algorithm works well

  2. Improved FCM algorithm for Clustering the IRIS data

    OpenAIRE

    K.Suresh,; R.Madana Mohana; A.RamaMohanReddy

    2011-01-01

    In this paper we present clustering method is very sensitive to the initial center values, requirements on the data set too high, and cannot handle noisy data the proposal method is using information entropy to initialize the cluster centers and introduce weighting parameters to adjust the location of cluster centers and noise problems. The improves clustering on web data efficiently using fuzzy c-means(FCM)clustering with iris data sets.

  3. Algorithms for Generalized Cluster-wise Linear Regression

    OpenAIRE

    Park, Young Woong; Jiang, Yan; Klabjan, Diego; Williams, Loren

    2016-01-01

    Cluster-wise linear regression (CLR), a clustering problem intertwined with regression, is to find clusters of entities such that the overall sum of squared errors from regressions performed over these clusters is minimized, where each cluster may have different variances. We generalize the CLR problem by allowing each entity to have more than one observation, and refer to it as generalized CLR. We propose an exact mathematical programming based approach relying on column generation, a column...

  4. An improved fuzzy c-means algorithm for unbalanced sized clusters

    Science.gov (United States)

    Gu, Shuguo; Liu, Jingjing; Xie, Qingguo; Wang, Luyao

    2012-02-01

    In this paper, we propose an improved fuzzy c-means (FCM) algorithm based on cluster height information to deal with the sensitivity of unbalanced sized clusters in FCM. As we know, cluster size sensitivity is an major drawback of FCM, which tends to balance the cluster sizes during iteration, so the center of smaller cluster might be drawn to the adjacent larger one, which will lead to bad classification. To overcome this problem, the cluster height information is considered and introduced to the distance function to adjust the conventional Euclidean distance, thus to control the effect on classification from cluster size difference. Experimental results demonstrate that our algorithm can obtain good clustering results in spite of great size difference, while traditional FCM cannot work well in such case. The improved FCM has shown its potential for extracting small clusters, especially in medical image segmentation.

  5. A heart disease recognition embedded system with fuzzy cluster algorithm.

    Science.gov (United States)

    de Carvalho, Helton Hugo; Moreno, Robson Luiz; Pimenta, Tales Cleber; Crepaldi, Paulo C; Cintra, Evaldo

    2013-06-01

    This article presents the viability analysis and the development of heart disease identification embedded system. It offers a time reduction on electrocardiogram - ECG signal processing by reducing the amount of data samples, without any significant loss. The goal of the developed system is the analysis of heart signals. The ECG signals are applied into the system that performs an initial filtering, and then uses a Gustafson-Kessel fuzzy clustering algorithm for the signal classification and correlation. The classification indicated common heart diseases such as angina, myocardial infarction and coronary artery diseases. The system uses the European electrocardiogram ST-T Database (EDB) as a reference for tests and evaluation. The results prove the system can perform the heart disease detection on a data set reduced from 213 to just 20 samples, thus providing a reduction to just 9.4% of the original set, while maintaining the same effectiveness. This system is validated in a Xilinx Spartan(®)-3A FPGA. The field programmable gate array (FPGA) implemented a Xilinx Microblaze(®) Soft-Core Processor running at a 50MHz clock rate. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

  6. Function-Oriented Networking and On-Demand Routing System in Network Using Ant Colony Optimization Algorithm

    Directory of Open Access Journals (Sweden)

    Young-Bo Sim

    2017-11-01

    Full Text Available In this paper, we proposed and developed Function-Oriented Networking (FON, a platform for network users. It has a different philosophy as opposed to technologies for network managers of Software-Defined Networking technology, OpenFlow. It is a technology that can immediately reflect the demands of the network users in the network, unlike the existing OpenFlow and Network Functions Virtualization (NFV, which do not reflect directly the needs of the network users. It allows the network user to determine the policy of the direct network, so it can be applied more precisely than the policy applied by the network manager. This is expected to increase the satisfaction of the service users when the network users try to provide new services. We developed FON function that performs on-demand routing for Low-Delay Required service. We analyzed the characteristics of the Ant Colony Optimization (ACO algorithm and found that the algorithm is suitable for low-delay required services. It was also the first in the world to implement the routing software using ACO Algorithm in the real Ethernet network. In order to improve the routing performance, several algorithms of the ACO Algorithm have been developed to enable faster path search-routing and path recovery. The relationship between the network performance index and the ACO routing parameters is derived, and the results are compared and analyzed. Through this, it was possible to develop the ACO algorithm.

  7. Application of Ant-Colony-Optimization algorithm for improved management of first flush effects in urban wastewater systems.

    Science.gov (United States)

    Verdaguer, M; Clara, N; Gutiérrez, O; Poch, M

    2014-07-01

    The first flush effect in combined sewer systems during storm events often causes overflows and overloads of the sewage treatment, which reduces the efficiency of the sewage treatment and decreases the quality of the receiving waters due to the pollutants that are contributed. The use of retention tanks constitutes a widely used way to mitigate this effect. However, the management of the pollutant loads encounters difficulties when the retention tanks are emptied. A new approach is proposed to solve this problem by fulfilling the treatment requirements in real time, focussing on the characteristics of the wastewater. The method is based on the execution of an Ant Colony Optimisation algorithm to obtain a satisfactory sequence for the discharge of the retention tanks. The discharge sequence considers the volume of stormwater and its concentration of pollutants including Suspended Solids, Biological Oxygen Demand and Chemical Oxygen Demand, Total Nitrogen and Total Phosphorus. The Ant Colony Optimisation algorithm was applied successfully to a case study with overall reduction of pollutant loads stored in retention tanks. The algorithm can be adapted in a simple way to the different scenarios, infrastructures and controllers of sewer systems. Copyright © 2014 Elsevier B.V. All rights reserved.

  8. A Self-Adaptive Fuzzy c-Means Algorithm for Determining the Optimal Number of Clusters.

    Science.gov (United States)

    Ren, Min; Liu, Peiyu; Wang, Zhihao; Yi, Jing

    2016-01-01

    For the shortcoming of fuzzy c -means algorithm (FCM) needing to know the number of clusters in advance, this paper proposed a new self-adaptive method to determine the optimal number of clusters. Firstly, a density-based algorithm was put forward. The algorithm, according to the characteristics of the dataset, automatically determined the possible maximum number of clusters instead of using the empirical rule [Formula: see text] and obtained the optimal initial cluster centroids, improving the limitation of FCM that randomly selected cluster centroids lead the convergence result to the local minimum. Secondly, this paper, by introducing a penalty function, proposed a new fuzzy clustering validity index based on fuzzy compactness and separation, which ensured that when the number of clusters verged on that of objects in the dataset, the value of clustering validity index did not monotonically decrease and was close to zero, so that the optimal number of clusters lost robustness and decision function. Then, based on these studies, a self-adaptive FCM algorithm was put forward to estimate the optimal number of clusters by the iterative trial-and-error process. At last, experiments were done on the UCI, KDD Cup 1999, and synthetic datasets, which showed that the method not only effectively determined the optimal number of clusters, but also reduced the iteration of FCM with the stable clustering result.

  9. A Self-Adaptive Fuzzy c-Means Algorithm for Determining the Optimal Number of Clusters

    Science.gov (United States)

    Wang, Zhihao; Yi, Jing

    2016-01-01

    For the shortcoming of fuzzy c-means algorithm (FCM) needing to know the number of clusters in advance, this paper proposed a new self-adaptive method to determine the optimal number of clusters. Firstly, a density-based algorithm was put forward. The algorithm, according to the characteristics of the dataset, automatically determined the possible maximum number of clusters instead of using the empirical rule n and obtained the optimal initial cluster centroids, improving the limitation of FCM that randomly selected cluster centroids lead the convergence result to the local minimum. Secondly, this paper, by introducing a penalty function, proposed a new fuzzy clustering validity index based on fuzzy compactness and separation, which ensured that when the number of clusters verged on that of objects in the dataset, the value of clustering validity index did not monotonically decrease and was close to zero, so that the optimal number of clusters lost robustness and decision function. Then, based on these studies, a self-adaptive FCM algorithm was put forward to estimate the optimal number of clusters by the iterative trial-and-error process. At last, experiments were done on the UCI, KDD Cup 1999, and synthetic datasets, which showed that the method not only effectively determined the optimal number of clusters, but also reduced the iteration of FCM with the stable clustering result. PMID:28042291

  10. The global kernel k-means algorithm for clustering in feature space.

    Science.gov (United States)

    Tzortzis, Grigorios F; Likas, Aristidis C

    2009-07-01

    Kernel k-means is an extension of the standard k -means clustering algorithm that identifies nonlinearly separable clusters. In order to overcome the cluster initialization problem associated with this method, we propose the global kernel k-means algorithm, a deterministic and incremental approach to kernel-based clustering. Our method adds one cluster at each stage, through a global search procedure consisting of several executions of kernel k-means from suitable initializations. This algorithm does not depend on cluster initialization, identifies nonlinearly separable clusters, and, due to its incremental nature and search procedure, locates near-optimal solutions avoiding poor local minima. Furthermore, two modifications are developed to reduce the computational cost that do not significantly affect the solution quality. The proposed methods are extended to handle weighted data points, which enables their application to graph partitioning. We experiment with several data sets and the proposed approach compares favorably to kernel k -means with random restarts.

  11. Genetic algorithm based two-mode clustering of metabolomics data

    NARCIS (Netherlands)

    Hageman, J.A.; van den Berg, R.A.; Westerhuis, J.A.; van der Werf, M.J.; Smilde, A.K.

    2008-01-01

    Metabolomics and other omics tools are generally characterized by large data sets with many variables obtained under different environmental conditions. Clustering methods and more specifically two-mode clustering methods are excellent tools for analyzing this type of data. Two-mode clustering

  12. An Enhanced Discrete Artificial Bee Colony Algorithm to Minimize the Total Flow Time in Permutation Flow Shop Scheduling with Limited Buffers

    Directory of Open Access Journals (Sweden)

    Guanlong Deng

    2016-01-01

    Full Text Available This paper presents an enhanced discrete artificial bee colony algorithm for minimizing the total flow time in the flow shop scheduling problem with buffer capacity. First, the solution in the algorithm is represented as discrete job permutation to directly convert to active schedule. Then, we present a simple and effective scheme called best insertion for the employed bee and onlooker bee and introduce a combined local search exploring both insertion and swap neighborhood. To validate the performance of the presented algorithm, a computational campaign is carried out on the Taillard benchmark instances, and computations and comparisons show that the proposed algorithm is not only capable of solving the benchmark set better than the existing discrete differential evolution algorithm and iterated greedy algorithm, but also capable of performing better than two recently proposed discrete artificial bee colony algorithms.

  13. Application and research of fuzzy clustering analysis algorithm under “micro-lecture” English teaching mode

    Directory of Open Access Journals (Sweden)

    Shi Ying

    2016-01-01

    Full Text Available The fuzzy clustering algorithm is to classify the data or indicators with a greater degree of similarity based on the principle of the same type of individuals possessing a greater similarity, and different types of individuals possessing differences, establish clear category boundaries, form any shape of relationship clusters in the solving process, and input the research indicators at random, in order to accurately analyze the significance of the indicators in the algorithm. The evaluation value of the clustering analysis can be obtained by the establishment of the fuzzy factor set based on the membership analysis, and the evaluation result can be analyzed through reference to the evaluation indicators of the fuzzy clustering analysis. The “micro-lecture” English teaching mode can be estimated and the analysis indicators can be rationally established based on the fuzzy clustering analysis algorithm, with better algorithm applicability.

  14. Image Watermarking Algorithm Based on Multiobjective Ant Colony Optimization and Singular Value Decomposition in Wavelet Domain

    Directory of Open Access Journals (Sweden)

    Khaled Loukhaoukha

    2013-01-01

    Full Text Available We present a new optimal watermarking scheme based on discrete wavelet transform (DWT and singular value decomposition (SVD using multiobjective ant colony optimization (MOACO. A binary watermark is decomposed using a singular value decomposition. Then, the singular values are embedded in a detailed subband of host image. The trade-off between watermark transparency and robustness is controlled by multiple scaling factors (MSFs instead of a single scaling factor (SSF. Determining the optimal values of the multiple scaling factors (MSFs is a difficult problem. However, a multiobjective ant colony optimization is used to determine these values. Experimental results show much improved performances of the proposed scheme in terms of transparency and robustness compared to other watermarking schemes. Furthermore, it does not suffer from the problem of high probability of false positive detection of the watermarks.

  15. Implementation of Clustering Algorithms for real datasets in Medical Diagnostics using MATLAB

    Directory of Open Access Journals (Sweden)

    B. Venkataramana

    2017-03-01

    Full Text Available As in the medical field, for one disease there require samples given by diagnosis. The samples will be analyzed by a doctor or a pharmacist. As the no. of patients increases their samples also increases, there require more time to analyze samples for deciding the stage of the disease. To analyze the sample every time requires a skilled person. The samples can be classified by applying them to clustering algorithms. Data clustering has been considered as the most important raw data analysis method used in data mining technology. Most of the clustering techniques proved their efficiency in many applications such as decision making systems, medical sciences, earth sciences etc. Partition based clustering is one of the main approach in clustering. There are various algorithms of data clustering, every algorithm has its own advantages and disadvantages. This work reports the results of classification performance of three such widely used algorithms namely K-means (KM, Fuzzy c-means and Fuzzy Possibilistic c-Means (FPCM clustering algorithms. To analyze these algorithms three known data sets from UCI machine learning repository are taken such as thyroid data, liver and wine. The efficiency of clustering output is compared with the classification performance, percentage of correctness. The experimental results show that K-means and FCM give same performance for liver data. And FCM and FPCM are giving same performance for thyroid and wine data. FPCM has more efficient classification performance in all the given data sets.

  16. A Trajectory Regression Clustering Technique Combining a Novel Fuzzy C-Means Clustering Algorithm with the Least Squares Method

    Directory of Open Access Journals (Sweden)

    Xiangbing Zhou

    2018-04-01

    Full Text Available Rapidly growing GPS (Global Positioning System trajectories hide much valuable information, such as city road planning, urban travel demand, and population migration. In order to mine the hidden information and to capture better clustering results, a trajectory regression clustering method (an unsupervised trajectory clustering method is proposed to reduce local information loss of the trajectory and to avoid getting stuck in the local optimum. Using this method, we first define our new concept of trajectory clustering and construct a novel partitioning (angle-based partitioning method of line segments; second, the Lagrange-based method and Hausdorff-based K-means++ are integrated in fuzzy C-means (FCM clustering, which are used to maintain the stability and the robustness of the clustering process; finally, least squares regression model is employed to achieve regression clustering of the trajectory. In our experiment, the performance and effectiveness of our method is validated against real-world taxi GPS data. When comparing our clustering algorithm with the partition-based clustering algorithms (K-means, K-median, and FCM, our experimental results demonstrate that the presented method is more effective and generates a more reasonable trajectory.

  17. An enhanced deterministic K-Means clustering algorithm for cancer subtype prediction from gene expression data.

    Science.gov (United States)

    Nidheesh, N; Abdul Nazeer, K A; Ameer, P M

    2017-12-01

    Clustering algorithms with steps involving randomness usually give different results on different executions for the same dataset. This non-deterministic nature of algorithms such as the K-Means clustering algorithm limits their applicability in areas such as cancer subtype prediction using gene expression data. It is hard to sensibly compare the results of such algorithms with those of other algorithms. The non-deterministic nature of K-Means is due to its random selection of data points as initial centroids. We propose an improved, density based version of K-Means, which involves a novel and systematic method for selecting initial centroids. The key idea of the algorithm is to select data points which belong to dense regions and which are adequately separated in feature space as the initial centroids. We compared the proposed algorithm to a set of eleven widely used single clustering algorithms and a prominent ensemble clustering algorithm which is being used for cancer data classification, based on the performances on a set of datasets comprising ten cancer gene expression datasets. The proposed algorithm has shown better overall performance than the others. There is a pressing need in the Biomedical domain for simple, easy-to-use and more accurate Machine Learning tools for cancer subtype prediction. The proposed algorithm is simple, easy-to-use and gives stable results. Moreover, it provides comparatively better predictions of cancer subtypes from gene expression data. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. An improved fuzzy C-means clustering algorithm for assisted therapy of chronic bronchitis.

    Science.gov (United States)

    Lu, Weijia; Yan, Zhuangzhi

    2015-01-01

    Bronchitis is considered a non-specific inflammation in the peripheral tissues of the trachea and bronchus. Many therapeutic schemes for chronic bronchitis have been reported in existing research. This work attempted to conduct optimization analysis of the therapeutic scheme for chronic bronchitis using a data mining method. To overcome the shortfalls of the current fuzzy C-means clustering (FCM) algorithm, this research proposed an improved kernel fuzzy C-means (KFCM) clustering algorithm. The improved KFCM algorithm solved traditional cluster algorithm problems in two ways: firstly FCM clustering was mapped in high-dimensional kernel space; and the samples in the initial input space R(S) were mapped to high-dimensional feature space R(p). Finally, the improved and traditional algorithms by computer simulation experiments. Based on the analysis of the simulation experiments on IRIS dataset in this research, improved KFCM algorithm could improve calculation accuracy by 10% because the initial value greatly decreased the number of iterations and improved the accuracy of the calculation. The improved KFCM algorithm was used to optimize the relationship between data structures in the process of iteration clustering so as to accelerate iteration convergence. The simulation results show that the improved KFCM algorithm performs better in terms of both calculating performance and clustering correctness.

  19. C-element: a new clustering algorithm to find high quality functional modules in PPI networks.

    Science.gov (United States)

    Ghasemi, Mahdieh; Rahgozar, Maseud; Bidkhori, Gholamreza; Masoudi-Nejad, Ali

    2013-01-01

    Graph clustering algorithms are widely used in the analysis of biological networks. Extracting functional modules in protein-protein interaction (PPI) networks is one such use. Most clustering algorithms whose focuses are on finding functional modules try either to find a clique like sub networks or to grow clusters starting from vertices with high degrees as seeds. These algorithms do not make any difference between a biological network and any other networks. In the current research, we present a new procedure to find functional modules in PPI networks. Our main idea is to model a biological concept and to use this concept for finding good functional modules in PPI networks. In order to evaluate the quality of the obtained clusters, we compared the results of our algorithm with those of some other widely used clustering algorithms on three high throughput PPI networks from Sacchromyces Cerevisiae, Homo sapiens and Caenorhabditis elegans as well as on some tissue specific networks. Gene Ontology (GO) analyses were used to compare the results of different algorithms. Each algorithm's result was then compared with GO-term derived functional modules. We also analyzed the effect of using tissue specific networks on the quality of the obtained clusters. The experimental results indicate that the new algorithm outperforms most of the others, and this improvement is more significant when tissue specific networks are used.

  20. A highly efficient multi-core algorithm for clustering extremely large datasets

    Directory of Open Access Journals (Sweden)

    Kraus Johann M

    2010-04-01

    Full Text Available Abstract Background In recent years, the demand for computational power in computational biology has increased due to rapidly growing data sets from microarray and other high-throughput technologies. This demand is likely to increase. Standard algorithms for analyzing data, such as cluster algorithms, need to be parallelized for fast processing. Unfortunately, most approaches for parallelizing algorithms largely rely on network communication protocols connecting and requiring multiple computers. One answer to this problem is to utilize the intrinsic capabilities in current multi-core hardware to distribute the tasks among the different cores of one computer. Results We introduce a multi-core parallelization of the k-means and k-modes cluster algorithms based on the design principles of transactional memory for clustering gene expression microarray type data and categorial SNP data. Our new shared memory parallel algorithms show to be highly efficient. We demonstrate their computational power and show their utility in cluster stability and sensitivity analysis employing repeated runs with slightly changed parameters. Computation speed of our Java based algorithm was increased by a factor of 10 for large data sets while preserving computational accuracy compared to single-core implementations and a recently published network based parallelization. Conclusions Most desktop computers and even notebooks provide at least dual-core processors. Our multi-core algorithms show that using modern algorithmic concepts, parallelization makes it possible to perform even such laborious tasks as cluster sensitivity and cluster number estimation on the laboratory computer.

  1. An improved initialization center k-means clustering algorithm based on distance and density

    Science.gov (United States)

    Duan, Yanling; Liu, Qun; Xia, Shuyin

    2018-04-01

    Aiming at the problem of the random initial clustering center of k means algorithm that the clustering results are influenced by outlier data sample and are unstable in multiple clustering, a method of central point initialization method based on larger distance and higher density is proposed. The reciprocal of the weighted average of distance is used to represent the sample density, and the data sample with the larger distance and the higher density are selected as the initial clustering centers to optimize the clustering results. Then, a clustering evaluation method based on distance and density is designed to verify the feasibility of the algorithm and the practicality, the experimental results on UCI data sets show that the algorithm has a certain stability and practicality.

  2. Discovery of Transition Rules for Cellular Automata Using Artificial Bee Colony and Particle Swarm Optimization Algorithms in Urban Growth Modeling

    Directory of Open Access Journals (Sweden)

    Fereydoun Naghibi

    2016-12-01

    Full Text Available This paper presents an advanced method in urban growth modeling to discover transition rules of cellular automata (CA using the artificial bee colony (ABC optimization algorithm. Also, comparisons between the simulation results of CA models optimized by the ABC algorithm and the particle swarm optimization algorithms (PSO as intelligent approaches were performed to evaluate the potential of the proposed methods. According to previous studies, swarm intelligence algorithms for solving optimization problems such as discovering transition rules of CA in land use change/urban growth modeling can produce reasonable results. Modeling of urban growth as a dynamic process is not straightforward because of the existence of nonlinearity and heterogeneity among effective involved variables which can cause a number of challenges for traditional CA. ABC algorithm, the new powerful swarm based optimization algorithms, can be used to capture optimized transition rules of CA. This paper has proposed a methodology based on remote sensing data for modeling urban growth with CA calibrated by the ABC algorithm. The performance of ABC-CA, PSO-CA, and CA-logistic models in land use change detection is tested for the city of Urmia, Iran, between 2004 and 2014. Validations of the models based on statistical measures such as overall accuracy, figure of merit, and total operating characteristic were made. We showed that the overall accuracy of the ABC-CA model was 89%, which was 1.5% and 6.2% higher than those of the PSO-CA and CA-logistic model, respectively. Moreover, the allocation disagreement (simulation error of the simulation results for the ABC-CA, PSO-CA, and CA-logistic models are 11%, 12.5%, and 17.2%, respectively. Finally, for all evaluation indices including running time, convergence capability, flexibility, statistical measurements, and the produced spatial patterns, the ABC-CA model performance showed relative improvement and therefore its superiority was

  3. An Ant Colony Optimization and Hybrid Metaheuristics Algorithm to Solve the Split Delivery Vehicle Routing Problem

    Science.gov (United States)

    2015-01-01

    Genetic algorithms generate solutions for optimization problem based on theory of evolution using concepts such as reproduction, crossover and...the Darwin’s survival of fittest concept in the theory of evolution . The genetic algorithm search mechanism consists of three phases: (1) Evaluation

  4. Towards enhancement of performance of K-means clustering using nature-inspired optimization algorithms.

    Science.gov (United States)

    Fong, Simon; Deb, Suash; Yang, Xin-She; Zhuang, Yan

    2014-01-01

    Traditional K-means clustering algorithms have the drawback of getting stuck at local optima that depend on the random values of initial centroids. Optimization algorithms have their advantages in guiding iterative computation to search for global optima while avoiding local optima. The algorithms help speed up the clustering process by converging into a global optimum early with multiple search agents in action. Inspired by nature, some contemporary optimization algorithms which include Ant, Bat, Cuckoo, Firefly, and Wolf search algorithms mimic the swarming behavior allowing them to cooperatively steer towards an optimal objective within a reasonable time. It is known that these so-called nature-inspired optimization algorithms have their own characteristics as well as pros and cons in different applications. When these algorithms are combined with K-means clustering mechanism for the sake of enhancing its clustering quality by avoiding local optima and finding global optima, the new hybrids are anticipated to produce unprecedented performance. In this paper, we report the results of our evaluation experiments on the integration of nature-inspired optimization methods into K-means algorithms. In addition to the standard evaluation metrics in evaluating clustering quality, the extended K-means algorithms that are empowered by nature-inspired optimization methods are applied on image segmentation as a case study of application scenario.

  5. Towards Enhancement of Performance of K-Means Clustering Using Nature-Inspired Optimization Algorithms

    Science.gov (United States)

    Deb, Suash; Yang, Xin-She

    2014-01-01

    Traditional K-means clustering algorithms have the drawback of getting stuck at local optima that depend on the random values of initial centroids. Optimization algorithms have their advantages in guiding iterative computation to search for global optima while avoiding local optima. The algorithms help speed up the clustering process by converging into a global optimum early with multiple search agents in action. Inspired by nature, some contemporary optimization algorithms which include Ant, Bat, Cuckoo, Firefly, and Wolf search algorithms mimic the swarming behavior allowing them to cooperatively steer towards an optimal objective within a reasonable time. It is known that these so-called nature-inspired optimization algorithms have their own characteristics as well as pros and cons in different applications. When these algorithms are combined with K-means clustering mechanism for the sake of enhancing its clustering quality by avoiding local optima and finding global optima, the new hybrids are anticipated to produce unprecedented performance. In this paper, we report the results of our evaluation experiments on the integration of nature-inspired optimization methods into K-means algorithms. In addition to the standard evaluation metrics in evaluating clustering quality, the extended K-means algorithms that are empowered by nature-inspired optimization methods are applied on image segmentation as a case study of application scenario. PMID:25202730

  6. Towards Enhancement of Performance of K-Means Clustering Using Nature-Inspired Optimization Algorithms

    Directory of Open Access Journals (Sweden)

    Simon Fong

    2014-01-01

    Full Text Available Traditional K-means clustering algorithms have the drawback of getting stuck at local optima that depend on the random values of initial centroids. Optimization algorithms have their advantages in guiding iterative computation to search for global optima while avoiding local optima. The algorithms help speed up the clustering process by converging into a global optimum early with multiple search agents in action. Inspired by nature, some contemporary optimization algorithms which include Ant, Bat, Cuckoo, Firefly, and Wolf search algorithms mimic the swarming behavior allowing them to cooperatively steer towards an optimal objective within a reasonable time. It is known that these so-called nature-inspired optimization algorithms have their own characteristics as well as pros and cons in different applications. When these algorithms are combined with K-means clustering mechanism for the sake of enhancing its clustering quality by avoiding local optima and finding global optima, the new hybrids are anticipated to produce unprecedented performance. In this paper, we report the results of our evaluation experiments on the integration of nature-inspired optimization methods into K-means algorithms. In addition to the standard evaluation metrics in evaluating clustering quality, the extended K-means algorithms that are empowered by nature-inspired optimization methods are applied on image segmentation as a case study of application scenario.

  7. A new clustering algorithm for scanning electron microscope images

    Science.gov (United States)

    Yousef, Amr; Duraisamy, Prakash; Karim, Mohammad

    2016-04-01

    A scanning electron microscope (SEM) is a type of electron microscope that produces images of a sample by scanning it with a focused beam of electrons. The electrons interact with the sample atoms, producing various signals that are collected by detectors. The gathered signals contain information about the sample's surface topography and composition. The electron beam is generally scanned in a raster scan pattern, and the beam's position is combined with the detected signal to produce an image. The most common configuration for an SEM produces a single value per pixel, with the results usually rendered as grayscale images. The captured images may be produced with insufficient brightness, anomalous contrast, jagged edges, and poor quality due to low signal-to-noise ratio, grained topography and poor surface details. The segmentation of the SEM images is a tackling problems in the presence of the previously mentioned distortions. In this paper, we are stressing on the clustering of these type of images. In that sense, we evaluate the performance of the well-known unsupervised clustering and classification techniques such as connectivity based clustering (hierarchical clustering), centroid-based clustering, distribution-based clustering and density-based clustering. Furthermore, we propose a new spatial fuzzy clustering technique that works efficiently on this type of images and compare its results against these regular techniques in terms of clustering validation metrics.

  8. Robust multi-scale clustering of large DNA microarray datasets with the consensus algorithm

    DEFF Research Database (Denmark)

    Grotkjær, Thomas; Winther, Ole; Regenberg, Birgitte

    2006-01-01

    Motivation: Hierarchical and relocation clustering (e.g. K-means and self-organizing maps) have been successful tools in the display and analysis of whole genome DNA microarray expression data. However, the results of hierarchical clustering are sensitive to outliers, and most relocation methods...... analysis by collecting re-occurring clustering patterns in a co-occurrence matrix. The results show that consensus clustering obtained from clustering multiple times with Variational Bayes Mixtures of Gaussians or K-means significantly reduces the classification error rate for a simulated dataset...... give results which are dependent on the initialization of the algorithm. Therefore, it is difficult to assess the significance of the results. We have developed a consensus clustering algorithm, where the final result is averaged over multiple clustering runs, giving a robust and reproducible...

  9. Novel density-based and hierarchical density-based clustering algorithms for uncertain data.

    Science.gov (United States)

    Zhang, Xianchao; Liu, Han; Zhang, Xiaotong

    2017-09-01

    Uncertain data has posed a great challenge to traditional clustering algorithms. Recently, several algorithms have been proposed for clustering uncertain data, and among them density-based techniques seem promising for handling data uncertainty. However, some issues like losing uncertain information, high time complexity and nonadaptive threshold have not been addressed well in the previous density-based algorithm FDBSCAN and hierarchical density-based algorithm FOPTICS. In this paper, we firstly propose a novel density-based algorithm PDBSCAN, which improves the previous FDBSCAN from the following aspects: (1) it employs a more accurate method to compute the probability that the distance between two uncertain objects is less than or equal to a boundary value, instead of the sampling-based method in FDBSCAN; (2) it introduces new definitions of probability neighborhood, support degree, core object probability, direct reachability probability, thus reducing the complexity and solving the issue of nonadaptive threshold (for core object judgement) in FDBSCAN. Then, we modify the algorithm PDBSCAN to an improved version (PDBSCANi), by using a better cluster assignment strategy to ensure that every object will be assigned to the most appropriate cluster, thus solving the issue of nonadaptive threshold (for direct density reachability judgement) in FDBSCAN. Furthermore, as PDBSCAN and PDBSCANi have difficulties for clustering uncertain data with non-uniform cluster density, we propose a novel hierarchical density-based algorithm POPTICS by extending the definitions of PDBSCAN, adding new definitions of fuzzy core distance and fuzzy reachability distance, and employing a new clustering framework. POPTICS can reveal the cluster structures of the datasets with different local densities in different regions better than PDBSCAN and PDBSCANi, and it addresses the issues in FOPTICS. Experimental results demonstrate the superiority of our proposed algorithms over the existing

  10. Constructing a graph of connections in clustering algorithm of complex objects

    Directory of Open Access Journals (Sweden)

    Татьяна Шатовская

    2015-05-01

    Full Text Available The article describes the results of modifying the algorithm Chameleon. Hierarchical multi-level algorithm consists of several phases: the construction of the count, coarsening, the separation and recovery. Each phase can be used various approaches and algorithms. The main aim of the work is to study the quality of the clustering of different sets of data using a set of algorithms combinations at different stages of the algorithm and improve the stage of construction by the optimization algorithm of k choice in the graph construction of k of nearest neighbors

  11. GAECH: Genetic Algorithm Based Energy Efficient Clustering Hierarchy in Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    B. Baranidharan

    2015-01-01

    Full Text Available Clustering the Wireless Sensor Networks (WSNs is the major issue which determines the lifetime of the network. The parameters chosen for clustering should be appropriate to form the clusters according to the need of the applications. Some of the well-known clustering techniques in WSN are designed only to reduce overall energy consumption in the network and increase the network lifetime. These algorithms achieve increased lifetime, but at the cost of overloading individual sensor nodes. Load balancing among the nodes in the network is also equally important in achieving increased lifetime. First Node Die (FND, Half Node Die (HND, and Last Node Die (LND are the different metrics for analysing lifetime of the network. In this paper, a new clustering algorithm, Genetic Algorithm based Energy efficient Clustering Hierarchy (GAECH algorithm, is proposed to increase FND, HND, and LND with a novel fitness function. The fitness function in GAECH forms well-balanced clusters considering the core parameters of a cluster, which again increases both the stability period and lifetime of the network. The experimental results also clearly indicate better performance of GAECH over other algorithms in all the necessary aspects.

  12. A scalable and practical one-pass clustering algorithm for recommender system

    Science.gov (United States)

    Khalid, Asra; Ghazanfar, Mustansar Ali; Azam, Awais; Alahmari, Saad Ali

    2015-12-01

    KMeans clustering-based recommendation algorithms have been proposed claiming to increase the scalability of recommender systems. One potential drawback of these algorithms is that they perform training offline and hence cannot accommodate the incremental updates with the arrival of new data, making them unsuitable for the dynamic environments. From this line of research, a new clustering algorithm called One-Pass is proposed, which is a simple, fast, and accurate. We show empirically that the proposed algorithm outperforms K-Means in terms of recommendation and training time while maintaining a good level of accuracy.

  13. Analysis of Ant Colony Optimization and Population-Based Evolutionary Algorithms on Dynamic Problems

    DEFF Research Database (Denmark)

    Lissovoi, Andrei

    the dynamic optimum for finite alphabets up to size μ, while MMAS is able to do so for any finite alphabet size. Parallel Evolutionary Algorithms on Maze. We prove that while a (1 + λ) EA is unable to track the optimum of the dynamic fitness function Maze for offspring population size up to λ = O(n1-ε......This thesis presents new running time analyses of nature-inspired algorithms on various dynamic problems. It aims to identify and analyse the features of algorithms and problem classes which allow efficient optimization to occur in the presence of dynamic behaviour. We consider the following...... settings: λ-MMAS on Dynamic Shortest Path Problems. We investigate how in-creasing the number of ants simulated per iteration may help an ACO algorithm to track optimum in a dynamic problem. It is shown that while a constant number of ants per-vertex is sufficient to track some oscillations, there also...

  14. Three-Dimensional Path Planning and Guidance of Leg Vascular Based on Improved Ant Colony Algorithm in Augmented Reality.

    Science.gov (United States)

    Gao, Ming-ke; Chen, Yi-min; Liu, Quan; Huang, Chen; Li, Ze-yu; Zhang, Dian-hua

    2015-11-01

    Preoperative path planning plays a critical role in vascular access surgery. Vascular access surgery has superior difficulties and requires long training periods as well as precise operation. Yet doctors are on different leves, thus bulky size of blood vessels is usually chosen to undergo surgery and other possible optimal path is not considered. Moreover, patients and surgeons will suffer from X-ray radiation during the surgical procedure. The study proposed an improved ant colony algorithm to plan a vascular optimal three-dimensional path with overall consideration of factors such as catheter diameter, vascular length, diameter as well as the curvature and torsion. To protect the doctor and patient from exposing to X-ray long-term, the paper adopted augmented reality technology to register the reconstructed vascular model and physical model meanwhile, locate catheter by the electromagnetic tracking system and used Head Mounted Display to show the planning path in real time and monitor catheter push procedure. The experiment manifests reasonableness of preoperative path planning and proves the reliability of the algorithm. The augmented reality experiment real time and accurately displays the vascular phantom model, planning path and the catheter trajectory and proves the feasibility of this method. The paper presented a useful and feasible surgical scheme which was based on the improved ant colony algorithm to plan vascular three-dimensional path in augmented reality. The study possessed practical guiding significance in preoperative path planning, intraoperative catheter guiding and surgical training, which provided a theoretical method of path planning for vascular access surgery. It was a safe and reliable path planning approach and possessed practical reference value.

  15. A Novel Automatic Detection System for ECG Arrhythmias Using Maximum Margin Clustering with Immune Evolutionary Algorithm

    Directory of Open Access Journals (Sweden)

    Bohui Zhu

    2013-01-01

    Full Text Available This paper presents a novel maximum margin clustering method with immune evolution (IEMMC for automatic diagnosis of electrocardiogram (ECG arrhythmias. This diagnostic system consists of signal processing, feature extraction, and the IEMMC algorithm for clustering of ECG arrhythmias. First, raw ECG signal is processed by an adaptive ECG filter based on wavelet transforms, and waveform of the ECG signal is detected; then, features are extracted from ECG signal to cluster different types of arrhythmias by the IEMMC algorithm. Three types of performance evaluation indicators are used to assess the effect of the IEMMC method for ECG arrhythmias, such as sensitivity, specificity, and accuracy. Compared with K-means and iterSVR algorithms, the IEMMC algorithm reflects better performance not only in clustering result but also in terms of global search ability and convergence ability, which proves its effectiveness for the detection of ECG arrhythmias.

  16. Performance analysis of unsupervised optimal fuzzy clustering algorithm for MRI brain tumor segmentation.

    Science.gov (United States)

    Blessy, S A Praylin Selva; Sulochana, C Helen

    2015-01-01

    Segmentation of brain tumor from Magnetic Resonance Imaging (MRI) becomes very complicated due to the structural complexities of human brain and the presence of intensity inhomogeneities. To propose a method that effectively segments brain tumor from MR images and to evaluate the performance of unsupervised optimal fuzzy clustering (UOFC) algorithm for segmentation of brain tumor from MR images. Segmentation is done by preprocessing the MR image to standardize intensity inhomogeneities followed by feature extraction, feature fusion and clustering. Different validation measures are used to evaluate the performance of the proposed method using different clustering algorithms. The proposed method using UOFC algorithm produces high sensitivity (96%) and low specificity (4%) compared to other clustering methods. Validation results clearly show that the proposed method with UOFC algorithm effectively segments brain tumor from MR images.

  17. Medical Image Retrieval Based On the Parallelization of the Cluster Sampling Algorithm

    OpenAIRE

    Ali, Hesham Arafat; Attiya, Salah; El-henawy, Ibrahim

    2017-01-01

    In this paper we develop parallel cluster sampling algorithms and show that a multi-chain version is embarrassingly parallel and can be used efficiently for medical image retrieval among other applications.

  18. An Adaptive Sweep-Circle Spatial Clustering Algorithm Based on Gestalt

    Directory of Open Access Journals (Sweden)

    Qingming Zhan

    2017-08-01

    Full Text Available An adaptive spatial clustering (ASC algorithm is proposed in this present study, which employs sweep-circle techniques and a dynamic threshold setting based on the Gestalt theory to detect spatial clusters. The proposed algorithm can automatically discover clusters in one pass, rather than through the modification of the initial model (for example, a minimal spanning tree, Delaunay triangulation, or Voronoi diagram. It can quickly identify arbitrarily-shaped clusters while adapting efficiently to non-homogeneous density characteristics of spatial data, without the need for prior knowledge or parameters. The proposed algorithm is also ideal for use in data streaming technology with dynamic characteristics flowing in the form of spatial clustering in large data sets.

  19. Kernel Clustering with a Differential Harmony Search Algorithm for Scheme Classification

    Directory of Open Access Journals (Sweden)

    Yu Feng

    2017-01-01

    Full Text Available This paper presents a kernel fuzzy clustering with a novel differential harmony search algorithm to coordinate with the diversion scheduling scheme classification. First, we employed a self-adaptive solution generation strategy and differential evolution-based population update strategy to improve the classical harmony search. Second, we applied the differential harmony search algorithm to the kernel fuzzy clustering to help the clustering method obtain better solutions. Finally, the combination of the kernel fuzzy clustering and the differential harmony search is applied for water diversion scheduling in East Lake. A comparison of the proposed method with other methods has been carried out. The results show that the kernel clustering with the differential harmony search algorithm has good performance to cooperate with the water diversion scheduling problems.

  20. PARTIAL TRAINING METHOD FOR HEURISTIC ALGORITHM OF POSSIBLE CLUSTERIZATION UNDER UNKNOWN NUMBER OF CLASSES

    Directory of Open Access Journals (Sweden)

    D. A. Viattchenin

    2009-01-01

    Full Text Available A method for constructing a subset of labeled objects which is used in a heuristic algorithm of possible  clusterization with partial  training is proposed in the  paper.  The  method  is  based  on  data preprocessing by the heuristic algorithm of possible clusterization using a transitive closure of a fuzzy tolerance. Method efficiency is demonstrated by way of an illustrative example.

  1. Clustered K nearest neighbor algorithm for daily inflow forecasting

    NARCIS (Netherlands)

    Akbari, M.; Van Overloop, P.J.A.T.M.; Afshar, A.

    2010-01-01

    Instance based learning (IBL) algorithms are a common choice among data driven algorithms for inflow forecasting. They are based on the similarity principle and prediction is made by the finite number of similar neighbors. In this sense, the similarity of a query instance is estimated according to

  2. A Coupled User Clustering Algorithm Based on Mixed Data for Web-Based Learning Systems

    Directory of Open Access Journals (Sweden)

    Ke Niu

    2015-01-01

    Full Text Available In traditional Web-based learning systems, due to insufficient learning behaviors analysis and personalized study guides, a few user clustering algorithms are introduced. While analyzing the behaviors with these algorithms, researchers generally focus on continuous data but easily neglect discrete data, each of which is generated from online learning actions. Moreover, there are implicit coupled interactions among the data but are frequently ignored in the introduced algorithms. Therefore, a mass of significant information which can positively affect clustering accuracy is neglected. To solve the above issues, we proposed a coupled user clustering algorithm for Wed-based learning systems by taking into account both discrete and continuous data, as well as intracoupled and intercoupled interactions of the data. The experiment result in this paper demonstrates the outperformance of the proposed algorithm.

  3. Methods for evaluating clustering algorithms for gene expression data using a reference set of functional classes

    Directory of Open Access Journals (Sweden)

    Datta Somnath

    2006-08-01

    Full Text Available Abstract Background A cluster analysis is the most commonly performed procedure (often regarded as a first step on a set of gene expression profiles. In most cases, a post hoc analysis is done to see if the genes in the same clusters can be functionally correlated. While past successes of such analyses have often been reported in a number of microarray studies (most of which used the standard hierarchical clustering, UPGMA, with one minus the Pearson's correlation coefficient as a measure of dissimilarity, often times such groupings could be misleading. More importantly, a systematic evaluation of the entire set of clusters produced by such unsupervised procedures is necessary since they also contain genes that are seemingly unrelated or may have more than one common function. Here we quantify the performance of a given unsupervised clustering algorithm applied to a given microarray study in terms of its ability to produce biologically meaningful clusters using a reference set of functional classes. Such a reference set may come from prior biological knowledge specific to a microarray study or may be formed using the growing databases of gene ontologies (GO for the annotated genes of the relevant species. Results In this paper, we introduce two performance measures for evaluating the results of a clustering algorithm in its ability to produce biologically meaningful clusters. The first measure is a biological homogeneity index (BHI. As the name suggests, it is a measure of how biologically homogeneous the clusters are. This can be used to quantify the performance of a given clustering algorithm such as UPGMA in grouping genes for a particular data set and also for comparing the performance of a number of competing clustering algorithms applied to the same data set. The second performance measure is called a biological stability index (BSI. For a given clustering algorithm and an expression data set, it measures the consistency of the clustering

  4. Enhanced Chain-Cluster Based Mixed Routing Algorithm for Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Husam Kareem Farhan

    2017-01-01

    Full Text Available Energy efficiency is a significant aspect in designing robust routing protocols for wireless sensor networks (WSNs. A reliable routing protocol has to be energy efficient and adaptive to the network size. To achieve high energy conservation and data aggregation, there are two major techniques, clusters and chains. In clustering technique, sensor networks are often divided into non-overlapping subsets called clusters. In chain technique, sensor nodes will be connected with the closest two neighbors, starting with the farthest node from the base station till the closest node to the base station. Each technique has its own advantages and disadvantages which motivate some researchers to come up with a hybrid routing algorithm that combines the full advantages of both cluster and chain techniques such as CCM (Chain-Cluster based Mixed routing. In this paper, introduce a routing algorithm relying on CCM algorithm called (Enhanced Chain-Cluster based Mixed routing algorithm E-CCM. Simulation results show that E-CCM algorithm improves the performance of CCM algorithm in terms of three performance metrics which are: energy consumption, network lifetime, and (FND and LND. MATLAB program is used to develop and test the simulation process in a computer with the following specifications: windows 7 (32-operating system, core i5, RAM 4 GB, hard 512 GB.

  5. An Adaptive Density-Based Time Series Clustering Algorithm: A Case Study on Rainfall Patterns

    Directory of Open Access Journals (Sweden)

    Xiaomi Wang

    2016-11-01

    Full Text Available Current time series clustering algorithms fail to effectively mine clustering distribution characteristics of time series data without sufficient prior knowledge. Furthermore, these algorithms fail to simultaneously consider the spatial attributes, non-spatial time series attribute values, and non-spatial time series attribute trends. This paper proposes an adaptive density-based time series clustering (DTSC algorithm that simultaneously considers the three above-mentioned attributes to relieve these limitations. In this algorithm, the Delaunay triangulation is first utilized in combination with particle swarm optimization (PSO to adaptively obtain objects with similar spatial attributes. An improved density-based clustering strategy is then adopted to detect clusters with similar non-spatial time series attribute values and time series attribute trends. The effectiveness and efficiency of the DTSC algorithm are validated by experiments on simulated datasets and real applications. The results indicate that the proposed DTSC algorithm effectively detects time series clusters with arbitrary shapes and similar attributes and densities while considering noises.

  6. Generalized fuzzy C-means clustering algorithm with improved fuzzy partitions.

    Science.gov (United States)

    Zhu, Lin; Chung, Fu-Lai; Wang, Shitong

    2009-06-01

    The fuzziness index m has important influence on the clustering result of fuzzy clustering algorithms, and it should not be forced to fix at the usual value m = 2. In view of its distinctive features in applications and its limitation in having m = 2 only, a recent advance of fuzzy clustering called fuzzy c-means clustering with improved fuzzy partitions (IFP-FCM) is extended in this paper, and a generalized algorithm called GIFP-FCM for more effective clustering is proposed. By introducing a novel membership constraint function, a new objective function is constructed, and furthermore, GIFP-FCM clustering is derived. Meanwhile, from the viewpoints of L(p) norm distance measure and competitive learning, the robustness and convergence of the proposed algorithm are analyzed. Furthermore, the classical fuzzy c-means algorithm (FCM) and IFP-FCM can be taken as two special cases of the proposed algorithm. Several experimental results including its application to noisy image texture segmentation are presented to demonstrate its average advantage over FCM and IFP-FCM in both clustering and robustness capabilities.

  7. A new validity measure for a correlation-based fuzzy c-means clustering algorithm.

    Science.gov (United States)

    Zhang, Mingrui; Zhang, Wei; Sicotte, Hugues; Yang, Ping

    2009-01-01

    One of the major challenges in unsupervised clustering is the lack of consistent means for assessing the quality of clusters. In this paper, we evaluate several validity measures in fuzzy clustering and develop a new measure for a fuzzy c-means algorithm which uses a Pearson correlation in its distance metrics. The measure is designed with within-cluster sum of square, and makes use of fuzzy memberships. In comparing to the existing fuzzy partition coefficient and a fuzzy validity index, this new measure performs consistently across six microarray datasets. The newly developed measure could be used to assess the validity of fuzzy clusters produced by a correlation-based fuzzy c-means clustering algorithm.

  8. Transfer function fitting using a continuous Ant Colony Optimization (ACO algorithm

    Directory of Open Access Journals (Sweden)

    A. Reineix

    2015-03-01

    Full Text Available An original approach is proposed in order to achieve the  fitting of ultra-wideband complex frequency functions, such  as the complex impedances, by using the so-called ACO  (Ant Colony Optimization methods. First, we present the  optimization principle of ACO, which originally was  dedicated to the combinatorial problems. Further on, the  extension to the continuous and mixed problems is  explained in more details. The interest in this approach is  proved by its ability to define practical constraints and  objectives, such as minimizing the number of filters used in  the model with respect to a fixed relative error. Finally, the  establishment of the model for the first and second order  filter types illustrates the power of the method and its  interest for the time-domain electromagnetic computation.

  9. A Novel Ant Colony Algorithm for the Single-Machine Total Weighted Tardiness Problem with Sequence Dependent Setup Times

    Directory of Open Access Journals (Sweden)

    Fardin Ahmadizar

    2011-08-01

    Full Text Available This paper deals with the NP-hard single-machine total weighted tardiness problem with sequence dependent setup times. Incorporating fuzzy sets and genetic operators, a novel ant colony optimization algorithm is developed for the problem. In the proposed algorithm, artificial ants construct solutions as orders of jobs based on the heuristic information as well as pheromone trails. To calculate the heuristic information, three well-known priority rules are adopted as fuzzy sets and then aggregated. When all artificial ants have terminated their constructions, genetic operators such as crossover and mutation are applied to generate new regions of the solution space. A local search is then performed to improve the performance quality of some of the solutions found. Moreover, at run-time the pheromone trails are locally as well as globally updated, and limited between lower and upper bounds. The proposed algorithm is experimented on a set of benchmark problems from the literature and compared with other metaheuristics.

  10. Complete Inverse Method Using Ant Colony Optimization Algorithm for Structural Parameters and Excitation Identification from Output Only Measurements

    Directory of Open Access Journals (Sweden)

    Jun Chen

    2014-01-01

    Full Text Available In vibration-based structural health monitoring of existing large civil structures, it is difficult, sometimes even impossible, to measure the actual excitation applied to structures. Therefore, an identification method using output-only measurements is crucial for the practical application of structural health monitoring. This paper integrates the ant colony optimization (ACO algorithm into the framework of the complete inverse method to simultaneously identify unknown structural parameters and input time history using output-only measurements. The complete inverse method, which was previously suggested by the authors, converts physical or spatial information of the unknown input into the objective function of an optimization problem that can be solved by the ACO algorithm. ACO is a newly developed swarm computation method that has a very good performance in solving complex global continuous optimization problems. The principles and implementation procedure of the ACO algorithm are first introduced followed by an introduction of the framework of the complete inverse method. Construction of the objective function is then described in detail with an emphasis on the common situation wherein a limited number of actuators are installed on some key locations of the structure. Applicability and feasibility of the proposed method were validated by numerical examples and experimental results from a three-story building model.

  11. An improved fuzzy c-means clustering algorithm based on shadowed sets and PSO.

    Science.gov (United States)

    Zhang, Jian; Shen, Ling

    2014-01-01

    To organize the wide variety of data sets automatically and acquire accurate classification, this paper presents a modified fuzzy c-means algorithm (SP-FCM) based on particle swarm optimization (PSO) and shadowed sets to perform feature clustering. SP-FCM introduces the global search property of PSO to deal with the problem of premature convergence of conventional fuzzy clustering, utilizes vagueness balance property of shadowed sets to handle overlapping among clusters, and models uncertainty in class boundaries. This new method uses Xie-Beni index as cluster validity and automatically finds the optimal cluster number within a specific range with cluster partitions that provide compact and well-separated clusters. Experiments show that the proposed approach significantly improves the clustering effect.

  12. An Improved Fuzzy c-Means Clustering Algorithm Based on Shadowed Sets and PSO

    Directory of Open Access Journals (Sweden)

    Jian Zhang

    2014-01-01

    Full Text Available To organize the wide variety of data sets automatically and acquire accurate classification, this paper presents a modified fuzzy c-means algorithm (SP-FCM based on particle swarm optimization (PSO and shadowed sets to perform feature clustering. SP-FCM introduces the global search property of PSO to deal with the problem of premature convergence of conventional fuzzy clustering, utilizes vagueness balance property of shadowed sets to handle overlapping among clusters, and models uncertainty in class boundaries. This new method uses Xie-Beni index as cluster validity and automatically finds the optimal cluster number within a specific range with cluster partitions that provide compact and well-separated clusters. Experiments show that the proposed approach significantly improves the clustering effect.

  13. Unsupervised Cryo-EM Data Clustering through Adaptively Constrained K-Means Algorithm.

    Science.gov (United States)

    Xu, Yaofang; Wu, Jiayi; Yin, Chang-Cheng; Mao, Youdong

    2016-01-01

    In single-particle cryo-electron microscopy (cryo-EM), K-means clustering algorithm is widely used in unsupervised 2D classification of projection images of biological macromolecules. 3D ab initio reconstruction requires accurate unsupervised classification in order to separate molecular projections of distinct orientations. Due to background noise in single-particle images and uncertainty of molecular orientations, traditional K-means clustering algorithm may classify images into wrong classes and produce classes with a large variation in membership. Overcoming these limitations requires further development on clustering algorithms for cryo-EM data analysis. We propose a novel unsupervised data clustering method building upon the traditional K-means algorithm. By introducing an adaptive constraint term in the objective function, our algorithm not only avoids a large variation in class sizes but also produces more accurate data clustering. Applications of this approach to both simulated and experimental cryo-EM data demonstrate that our algorithm is a significantly improved alterative to the traditional K-means algorithm in single-particle cryo-EM analysis.

  14. ALGORITHM FOR CONSTRUCTION OF REGIONAL AGRARIAN-INDUSTRIAL CLUSTERS IN THE MODERNIZED ECONOMY

    Directory of Open Access Journals (Sweden)

    I. S. Vazhenina

    2010-03-01

    Full Text Available Necessity and timeliness of regional agrarian-industrial cluster generation has been substantiated in the present paper. A program algorithm concerned with regional agrarian-industrial cluster generation has been developed. Possible results of the given programme implementation have been demonstrated.

  15. An equi-biased k-prototypes algorithm for clustering mixed-type data

    Indian Academy of Sciences (India)

    Ravi Sankar Sangam

    2018-03-14

    Mar 14, 2018 ... scale with respect to their dimensionality, which is very beneficial to improve the efficiency of clustering result. The efficacy of our method is shown by .... clustering mixed data with application to catalog marketing data. However, in this algorithm a ...... discovery handbook. New York: Springer. [37] Gabor M ...

  16. Feature Selection Method Based on Artificial Bee Colony Algorithm and Support Vector Machines for Medical Datasets Classification

    Directory of Open Access Journals (Sweden)

    Mustafa Serter Uzer

    2013-01-01

    Full Text Available This paper offers a hybrid approach that uses the artificial bee colony (ABC algorithm for feature selection and support vector machines for classification. The purpose of this paper is to test the effect of elimination of the unimportant and obsolete features of the datasets on the success of the classification, using the SVM classifier. The developed approach conventionally used in liver diseases and diabetes diagnostics, which are commonly observed and reduce the quality of life, is developed. For the diagnosis of these diseases, hepatitis, liver disorders and diabetes datasets from the UCI database were used, and the proposed system reached a classification accuracies of 94.92%, 74.81%, and 79.29%, respectively. For these datasets, the classification accuracies were obtained by the help of the 10-fold cross-validation method. The results show that the performance of the method is highly successful compared to other results attained and seems very promising for pattern recognition applications.

  17. A Framework for Evaluation and Exploration of Clustering Algorithms in Subspaces of High Dimensional Databases

    DEFF Research Database (Denmark)

    Müller, Emmanuel; Assent, Ira; Günnemann, Stephan

    2011-01-01

    comparative studies on the advantages and disadvantages of the different algorithms exist. Part of the underlying problem is the lack of available open source implementations that could be used by researchers to understand, compare, and extend subspace and projected clustering algorithms. In this work, we...

  18. GenClust: A genetic algorithm for clustering gene expression data

    Directory of Open Access Journals (Sweden)

    Raimondi Alessandra

    2005-12-01

    Full Text Available Abstract Background Clustering is a key step in the analysis of gene expression data, and in fact, many classical clustering algorithms are used, or more innovative ones have been designed and validated for the task. Despite the widespread use of artificial intelligence techniques in bioinformatics and, more generally, data analysis, there are very few clustering algorithms based on the genetic paradigm, yet that paradigm has great potential in finding good heuristic solutions to a difficult optimization problem such as clustering. Results GenClust is a new genetic algorithm for clustering gene expression data. It has two key features: (a a novel coding of the search space that is simple, compact and easy to update; (b it can be used naturally in conjunction with data driven internal validation methods. We have experimented with the FOM methodology, specifically conceived for validating clusters of gene expression data. The validity of GenClust has been assessed experimentally on real data sets, both with the use of validation measures and in comparison with other algorithms, i.e., Average Link, Cast, Click and K-means. Conclusion Experiments show that none of the algorithms we have used is markedly superior to the others across data sets and validation measures; i.e., in many cases the observed differences between the worst and best performing algorithm may be statistically insignificant and they could be considered equivalent. However, there are cases in which an algorithm may be better than others and therefore worthwhile. In particular, experiments for GenClust show that, although simple in its data representation, it converges very rapidly to a local optimum and that its ability to identify meaningful clusters is comparable, and sometimes superior, to that of more sophisticated algorithms. In addition, it is well suited for use in conjunction with data driven internal validation measures and, in particular, the FOM methodology.

  19. An adaptive immune optimization algorithm with dynamic lattice searching operation for fast optimization of atomic clusters

    International Nuclear Information System (INIS)

    Wu, Xia; Wu, Genhua

    2014-01-01

    Highlights: • A high efficient method for optimization of atomic clusters is developed. • Its performance is studied by optimizing Lennard-Jones clusters and Ag clusters. • The method is proved to be quite efficient. • A new Ag 61 cluster with stacking-fault face-centered cubic motif is found. - Abstract: Geometrical optimization of atomic clusters is performed by a development of adaptive immune optimization algorithm (AIOA) with dynamic lattice searching (DLS) operation (AIOA-DLS method). By a cycle of construction and searching of the dynamic lattice (DL), DLS algorithm rapidly makes the clusters more regular and greatly reduces the potential energy. DLS can thus be used as an operation acting on the new individuals after mutation operation in AIOA to improve the performance of the AIOA. The AIOA-DLS method combines the merit of evolutionary algorithm and idea of dynamic lattice. The performance of the proposed method is investigated in the optimization of Lennard-Jones clusters within 250 atoms and silver clusters described by many-body Gupta potential within 150 atoms. Results reported in the literature are reproduced, and the motif of Ag 61 cluster is found to be stacking-fault face-centered cubic, whose energy is lower than that of previously obtained icosahedron

  20. An adaptive immune optimization algorithm with dynamic lattice searching operation for fast optimization of atomic clusters

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Xia, E-mail: xiawu@mail.nankai.edu.cn; Wu, Genhua

    2014-08-31

    Highlights: • A high efficient method for optimization of atomic clusters is developed. • Its performance is studied by optimizing Lennard-Jones clusters and Ag clusters. • The method is proved to be quite efficient. • A new Ag{sub 61} cluster with stacking-fault face-centered cubic motif is found. - Abstract: Geometrical optimization of atomic clusters is performed by a development of adaptive immune optimization algorithm (AIOA) with dynamic lattice searching (DLS) operation (AIOA-DLS method). By a cycle of construction and searching of the dynamic lattice (DL), DLS algorithm rapidly makes the clusters more regular and greatly reduces the potential energy. DLS can thus be used as an operation acting on the new individuals after mutation operation in AIOA to improve the performance of the AIOA. The AIOA-DLS method combines the merit of evolutionary algorithm and idea of dynamic lattice. The performance of the proposed method is investigated in the optimization of Lennard-Jones clusters within 250 atoms and silver clusters described by many-body Gupta potential within 150 atoms. Results reported in the literature are reproduced, and the motif of Ag{sub 61} cluster is found to be stacking-fault face-centered cubic, whose energy is lower than that of previously obtained icosahedron.

  1. Soil data clustering by using K-means and fuzzy K-means algorithm

    Directory of Open Access Journals (Sweden)

    E. Hot

    2016-06-01

    Full Text Available A problem of soil clustering based on the chemical characteristics of soil, and proper visual representation of the obtained results, is analysed in the paper. To that aim, K-means and fuzzy K-means algorithms are adapted for soil data clustering. A database of soil characteristics sampled in Montenegro is used for a comparative analysis of implemented algorithms. The procedure of setting proper values for control parameters of fuzzy K-means is illustrated on the used database. In addition, validation of clustering is made through visualisation. Classified soil data are presented on the static Google map and dynamic Open Street Map.

  2. Improved Density Based Spatial Clustering of Applications of Noise Clustering Algorithm for Knowledge Discovery in Spatial Data

    Directory of Open Access Journals (Sweden)

    Arvind Sharma

    2016-01-01

    Full Text Available There are many techniques available in the field of data mining and its subfield spatial data mining is to understand relationships between data objects. Data objects related with spatial features are called spatial databases. These relationships can be used for prediction and trend detection between spatial and nonspatial objects for social and scientific reasons. A huge data set may be collected from different sources as satellite images, X-rays, medical images, traffic cameras, and GIS system. To handle this large amount of data and set relationship between them in a certain manner with certain results is our primary purpose of this paper. This paper gives a complete process to understand how spatial data is different from other kinds of data sets and how it is refined to apply to get useful results and set trends to predict geographic information system and spatial data mining process. In this paper a new improved algorithm for clustering is designed because role of clustering is very indispensable in spatial data mining process. Clustering methods are useful in various fields of human life such as GIS (Geographic Information System, GPS (Global Positioning System, weather forecasting, air traffic controller, water treatment, area selection, cost estimation, planning of rural and urban areas, remote sensing, and VLSI designing. This paper presents study of various clustering methods and algorithms and an improved algorithm of DBSCAN as IDBSCAN (Improved Density Based Spatial Clustering of Application of Noise. The algorithm is designed by addition of some important attributes which are responsible for generation of better clusters from existing data sets in comparison of other methods.

  3. Reconstruction of a digital core containing clay minerals based on a clustering algorithm

    Science.gov (United States)

    He, Yanlong; Pu, Chunsheng; Jing, Cheng; Gu, Xiaoyu; Chen, Qingdong; Liu, Hongzhi; Khan, Nasir; Dong, Qiaoling

    2017-10-01

    It is difficult to obtain a core sample and information for digital core reconstruction of mature sandstone reservoirs around the world, especially for an unconsolidated sandstone reservoir. Meanwhile, reconstruction and division of clay minerals play a vital role in the reconstruction of the digital cores, although the two-dimensional data-based reconstruction methods are specifically applicable as the microstructure reservoir simulation methods for the sandstone reservoir. However, reconstruction of clay minerals is still challenging from a research viewpoint for the better reconstruction of various clay minerals in the digital cores. In the present work, the content of clay minerals was considered on the basis of two-dimensional information about the reservoir. After application of the hybrid method, and compared with the model reconstructed by the process-based method, the digital core containing clay clusters without the labels of the clusters' number, size, and texture were the output. The statistics and geometry of the reconstruction model were similar to the reference model. In addition, the Hoshen-Kopelman algorithm was used to label various connected unclassified clay clusters in the initial model and then the number and size of clay clusters were recorded. At the same time, the K -means clustering algorithm was applied to divide the labeled, large connecting clusters into smaller clusters on the basis of difference in the clusters' characteristics. According to the clay minerals' characteristics, such as types, textures, and distributions, the digital core containing clay minerals was reconstructed by means of the clustering algorithm and the clay clusters' structure judgment. The distributions and textures of the clay minerals of the digital core were reasonable. The clustering algorithm improved the digital core reconstruction and provided an alternative method for the simulation of different clay minerals in the digital cores.

  4. Reconstruction of a digital core containing clay minerals based on a clustering algorithm.

    Science.gov (United States)

    He, Yanlong; Pu, Chunsheng; Jing, Cheng; Gu, Xiaoyu; Chen, Qingdong; Liu, Hongzhi; Khan, Nasir; Dong, Qiaoling

    2017-10-01

    It is difficult to obtain a core sample and information for digital core reconstruction of mature sandstone reservoirs around the world, especially for an unconsolidated sandstone reservoir. Meanwhile, reconstruction and division of clay minerals play a vital role in the reconstruction of the digital cores, although the two-dimensional data-based reconstruction methods are specifically applicable as the microstructure reservoir simulation methods for the sandstone reservoir. However, reconstruction of clay minerals is still challenging from a research viewpoint for the better reconstruction of various clay minerals in the digital cores. In the present work, the content of clay minerals was considered on the basis of two-dimensional information about the reservoir. After application of the hybrid method, and compared with the model reconstructed by the process-based method, the digital core containing clay clusters without the labels of the clusters' number, size, and texture were the output. The statistics and geometry of the reconstruction model were similar to the reference model. In addition, the Hoshen-Kopelman algorithm was used to label various connected unclassified clay clusters in the initial model and then the number and size of clay clusters were recorded. At the same time, the K-means clustering algorithm was applied to divide the labeled, large connecting clusters into smaller clusters on the basis of difference in the clusters' characteristics. According to the clay minerals' characteristics, such as types, textures, and distributions, the digital core containing clay minerals was reconstructed by means of the clustering algorithm and the clay clusters' structure judgment. The distributions and textures of the clay minerals of the digital core were reasonable. The clustering algorithm improved the digital core reconstruction and provided an alternative method for the simulation of different clay minerals in the digital cores.

  5. Data Clustering on Breast Cancer Data Using Firefly Algorithm with Golden Ratio Method

    Directory of Open Access Journals (Sweden)

    DEMIR, M.

    2015-05-01

    Full Text Available Heuristic methods are problem solving methods. In general, they obtain near-optimal solutions, and they do not take the care of provability of this case. The heuristic methods do not guarantee to obtain the optimal results; however, they guarantee to obtain near-optimal solutions in considerable time. In this paper, an application was performed by using firefly algorithm - one of the heuristic methods. The golden ratio was applied to different steps of firefly algorithm and different parameters of firefly algorithm to develop a new algorithm - called Firefly Algorithm with Golden Ratio (FAGR. It was shown that the golden ratio made firefly algorithm be superior to the firefly algorithm without golden ratio. At this aim, the developed algorithm was applied to WBCD database (breast cancer database to cluster data obtained from breast cancer patients. The highest obtained success rate among all executions is 96% and the highest obtained average success rate in all executions is 94.5%.

  6. Graph-based clustering and data visualization algorithms

    CERN Document Server

    Vathy-Fogarassy, Ágnes

    2013-01-01

    This work presents a data visualization technique that combines graph-based topology representation and dimensionality reduction methods to visualize the intrinsic data structure in a low-dimensional vector space. The application of graphs in clustering and visualization has several advantages. A graph of important edges (where edges characterize relations and weights represent similarities or distances) provides a compact representation of the entire complex data set. This text describes clustering and visualization methods that are able to utilize information hidden in these graphs, based on

  7. An Enhanced PSO-Based Clustering Energy Optimization Algorithm for Wireless Sensor Network

    Directory of Open Access Journals (Sweden)

    C. Vimalarani

    2016-01-01

    Full Text Available Wireless Sensor Network (WSN is a network which formed with a maximum number of sensor nodes which are positioned in an application environment to monitor the physical entities in a target area, for example, temperature monitoring environment, water level, monitoring pressure, and health care, and various military applications. Mostly sensor nodes are equipped with self-supported battery power through which they can perform adequate operations and communication among neighboring nodes. Maximizing the lifetime of the Wireless Sensor networks, energy conservation measures are essential for improving the performance of WSNs. This paper proposes an Enhanced PSO-Based Clustering Energy Optimization (EPSO-CEO algorithm for Wireless Sensor Network in which clustering and clustering head selection are done by using Particle Swarm Optimization (PSO algorithm with respect to minimizing the power consumption in WSN. The performance metrics are evaluated and results are compared with competitive clustering algorithm to validate the reduction in energy consumption.

  8. An Enhanced PSO-Based Clustering Energy Optimization Algorithm for Wireless Sensor Network.

    Science.gov (United States)

    Vimalarani, C; Subramanian, R; Sivanandam, S N

    2016-01-01

    Wireless Sensor Network (WSN) is a network which formed with a maximum number of sensor nodes which are positioned in an application environment to monitor the physical entities in a target area, for example, temperature monitoring environment, water level, monitoring pressure, and health care, and various military applications. Mostly sensor nodes are equipped with self-supported battery power through which they can perform adequate operations and communication among neighboring nodes. Maximizing the lifetime of the Wireless Sensor networks, energy conservation measures are essential for improving the performance of WSNs. This paper proposes an Enhanced PSO-Based Clustering Energy Optimization (EPSO-CEO) algorithm for Wireless Sensor Network in which clustering and clustering head selection are done by using Particle Swarm Optimization (PSO) algorithm with respect to minimizing the power consumption in WSN. The performance metrics are evaluated and results are compared with competitive clustering algorithm to validate the reduction in energy consumption.

  9. Evaluation of clustering algorithms for gene expression data using gene ontology annotations.

    Science.gov (United States)

    Ma, Ning; Zhang, Zheng-Guo

    2012-09-01

    Clustering is a useful exploratory technique for interpreting gene expression data to reveal groups of genes sharing common functional attributes. Biologists frequently face the problem of choosing an appropriate algorithm. We aimed to provide a standalone, easily accessible and biologically oriented criterion for expression data clustering evaluation. An external criterion utilizing annotation based similarities between genes is proposed in this work. Gene ontology information is employed as the annotation source. Comparisons among six widely used clustering algorithms over various types of gene expression data sets were carried out based on the criterion proposed. The rank of these algorithms given by the criterion coincides with our common knowledge. Single-linkage has significantly poorer performance, even worse than the random algorithm. Ward's method archives the best performance in most cases. The criterion proposed has a strong ability to distinguish among different clustering algorithms with different distance measurements. It is also demonstrated that analyzing main contributors of the criterion may offer some guidelines in finding local compact clusters. As an addition, we suggest using Ward's algorithm for gene expression data analysis.

  10. Functional Principal Component Analysis and Randomized Sparse Clustering Algorithm for Medical Image Analysis

    Science.gov (United States)

    Lin, Nan; Jiang, Junhai; Guo, Shicheng; Xiong, Momiao

    2015-01-01

    Due to the advancement in sensor technology, the growing large medical image data have the ability to visualize the anatomical changes in biological tissues. As a consequence, the medical images have the potential to enhance the diagnosis of disease, the prediction of clinical outcomes and the characterization of disease progression. But in the meantime, the growing data dimensions pose great methodological and computational challenges for the representation and selection of features in image cluster analysis. To address these challenges, we first extend the functional principal component analysis (FPCA) from one dimension to two dimensions to fully capture the space variation of image the signals. The image signals contain a large number of redundant features which provide no additional information for clustering analysis. The widely used methods for removing the irrelevant features are sparse clustering algorithms using a lasso-type penalty to select the features. However, the accuracy of clustering using a lasso-type penalty depends on the selection of the penalty parameters and the threshold value. In practice, they are difficult to determine. Recently, randomized algorithms have received a great deal of attentions in big data analysis. This paper presents a randomized algorithm for accurate feature selection in image clustering analysis. The proposed method is applied to both the liver and kidney cancer histology image data from the TCGA database. The results demonstrate that the randomized feature selection method coupled with functional principal component analysis substantially outperforms the current sparse clustering algorithms in image cluster analysis. PMID:26196383

  11. Comparison of Clustering Algorithms for the Identification of Topics on Twitter

    Directory of Open Access Journals (Sweden)

    Marjori N. M. Klinczak

    2016-05-01

    Full Text Available Topic Identification in Social Networks has become an important task when dealing with event detection, particularly when global communities are affected. In order to attack this problem, text processing techniques and machine learning algorithms have been extensively used. In this paper we compare four clustering algorithms – k-means, k-medoids, DBSCAN and NMF (Non-negative Matrix Factorization – in order to detect topics related to textual messages obtained from Twitter. The algorithms were applied to a database initially composed by tweets having hashtags related to the recent Nepal earthquake as initial context. Obtained results suggest that the NMF clustering algorithm presents superior results, providing simpler clusters that are also easier to interpret.

  12. Performance quantification of clustering algorithms for false positive removal in fMRI by ROC curves

    Directory of Open Access Journals (Sweden)

    André Salles Cunha Peres

    Full Text Available Abstract Introduction Functional magnetic resonance imaging (fMRI is a non-invasive technique that allows the detection of specific cerebral functions in humans based on hemodynamic changes. The contrast changes are about 5%, making visual inspection impossible. Thus, statistic strategies are applied to infer which brain region is engaged in a task. However, the traditional methods like general linear model and cross-correlation utilize voxel-wise calculation, introducing a lot of false-positive data. So, in this work we tested post-processing cluster algorithms to diminish the false-positives. Methods In this study, three clustering algorithms (the hierarchical cluster, k-means and self-organizing maps were tested and compared for false-positive removal in the post-processing of cross-correlation analyses. Results Our results showed that the hierarchical cluster presented the best performance to remove the false positives in fMRI, being 2.3 times more accurate than k-means, and 1.9 times more accurate than self-organizing maps. Conclusion The hierarchical cluster presented the best performance in false-positive removal because it uses the inconsistency coefficient threshold, while k-means and self-organizing maps utilize a priori cluster number (centroids and neurons number; thus, the hierarchical cluster avoids clustering scattered voxels, as the inconsistency coefficient threshold allows only the voxels to be clustered that are at a minimum distance to some cluster.

  13. Data Aggregation in Wireless Sensor Networks Using Modified Voronoi Fuzzy Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    Nadia Adnan Shiltagh

    2015-04-01

    Full Text Available Data centric techniques, like data aggregation via modified algorithm based on fuzzy clustering algorithm with voronoi diagram which is called modified Voronoi Fuzzy Clustering Algorithm (VFCA is presented in this paper. In the modified algorithm, the sensed area divided into number of voronoi cells by applying voronoi diagram, these cells are clustered by a fuzzy C-means method (FCM to reduce the transmission distance. Then an appropriate cluster head (CH for each cluster is elected. Three parameters are used for this election process, the energy, distance between CH and its neighbor sensors and packet loss values. Furthermore, data aggregation is employed in each CH to reduce the amount of data transmission which lead to extend the network lifetime and reduce the traffic that may be accrue in the buffer of sink node. Each cluster head collected data from its members and forwards it to the sink node. A comparative study between modified VFCA and LEACH protocol is implemented in this paper and shows that the modified VFCA is more efficient than LEACH protocol in terms of network lifetime and average energy consumption. Another comparative study between modified VFCA and K-Means clustering algorithm is presented and shows that the modified VFCA is more efficient than K-Means clustering algorithm in terms of packets transmitted to sink node, buffer utilization, packet loss values and running time. A simulation process is developed and tested using Matlab R2010a program in a computer having the following properties: windows 7 (32-bit operating system, core i7, RAM 4GB, hard 1TB.

  14. Online cluster-finding algorithms for the PANDA electromagnetic calorimeter

    NARCIS (Netherlands)

    Tiemens, Marcel

    2017-01-01

    Om zeldzame processen zoals de vorming van exotische deeltjes te kunnen bestuderen, is het PANDA experiment opgezet. Om de grote hoeveelheden data te kunnen verwerken, verwerken de subsystemen de data voor. Een voorbeeld is het algoritme om online naar clusters te zoeken in de data van de

  15. A Class of Manifold Regularized Multiplicative Update Algorithms for Image Clustering.

    Science.gov (United States)

    Yang, Shangming; Yi, Zhang; He, Xiaofei; Li, Xuelong

    2015-12-01

    Multiplicative update algorithms are important tools for information retrieval, image processing, and pattern recognition. However, when the graph regularization is added to the cost function, different classes of sample data may be mapped to the same subspace, which leads to the increase of data clustering error rate. In this paper, an improved nonnegative matrix factorization (NMF) cost function is introduced. Based on the cost function, a class of novel graph regularized NMF algorithms is developed, which results in a class of extended multiplicative update algorithms with manifold structure regularization. Analysis shows that in the learning, the proposed algorithms can efficiently minimize the rank of the data representation matrix. Theoretical results presented in this paper are confirmed by simulations. For different initializations and data sets, variation curves of cost functions and decomposition data are presented to show the convergence features of the proposed update rules. Basis images, reconstructed images, and clustering results are utilized to present the efficiency of the new algorithms. Last, the clustering accuracies of different algorithms are also investigated, which shows that the proposed algorithms can achieve state-of-the-art performance in applications of image clustering.

  16. A fast density-based clustering algorithm for real-time Internet of Things stream.

    Science.gov (United States)

    Amini, Amineh; Saboohi, Hadi; Wah, Teh Ying; Herawan, Tutut

    2014-01-01

    Data streams are continuously generated over time from Internet of Things (IoT) devices. The faster all of this data is analyzed, its hidden trends and patterns discovered, and new strategies created, the faster action can be taken, creating greater value for organizations. Density-based method is a prominent class in clustering data streams. It has the ability to detect arbitrary shape clusters, to handle outlier, and it does not need the number of clusters in advance. Therefore, density-based clustering algorithm is a proper choice for clustering IoT streams. Recently, several density-based algorithms have been proposed for clustering data streams. However, density-based clustering in limited time is still a challenging issue. In this paper, we propose a density-based clustering algorithm for IoT streams. The method has fast processing time to be applicable in real-time application of IoT devices. Experimental results show that the proposed approach obtains high quality results with low computation time on real and synthetic datasets.

  17. A Fast Density-Based Clustering Algorithm for Real-Time Internet of Things Stream

    Directory of Open Access Journals (Sweden)

    Amineh Amini

    2014-01-01

    Full Text Available Data streams are continuously generated over time from Internet of Things (IoT devices. The faster all of this data is analyzed, its hidden trends and patterns discovered, and new strategies created, the faster action can be taken, creating greater value for organizations. Density-based method is a prominent class in clustering data streams. It has the ability to detect arbitrary shape clusters, to handle outlier, and it does not need the number of clusters in advance. Therefore, density-based clustering algorithm is a proper choice for clustering IoT streams. Recently, several density-based algorithms have been proposed for clustering data streams. However, density-based clustering in limited time is still a challenging issue. In this paper, we propose a density-based clustering algorithm for IoT streams. The method has fast processing time to be applicable in real-time application of IoT devices. Experimental results show that the proposed approach obtains high quality results with low computation time on real and synthetic datasets.

  18. Robust multi-scale clustering of large DNA microarray datasets with the consensus algorithm

    DEFF Research Database (Denmark)

    Grotkjær, Thomas; Winther, Ole; Regenberg, Birgitte

    2006-01-01

    analysis by collecting re-occurring clustering patterns in a co-occurrence matrix. The results show that consensus clustering obtained from clustering multiple times with Variational Bayes Mixtures of Gaussians or K-means significantly reduces the classification error rate for a simulated dataset...... methods. It is shown that the method is robust and gives low classification error rates for a realistic, simulated dataset. The algorithm is also demonstrated for real datasets. It is shown that more biological meaningful transcriptional patterns can be found without conservative statistical or fold......-change exclusion of data. Availability: Matlab source code for the clustering algorithm ClusterLustre, and the simulated dataset for testing are available upon request from T.G. and O.W. Contact: tg@biocentrum.dtu.dk and owi@imm.dtu.dk Supplementary information: http://www.cmb.dtu.dk/...

  19. Thermodynamic Optimization of a Geothermal- Based Organic Rankine Cycle System Using an Artificial Bee Colony Algorithm

    Directory of Open Access Journals (Sweden)

    Osman Özkaraca

    2017-10-01

    Full Text Available Geothermal energy is a renewable form of energy, however due to misuse, processing and management issues, it is necessary to use the resource more efficiently. To increase energy efficiency, energy systems engineers carry out careful energy control studies and offer alternative solutions. With this aim, this study was conducted to improve the performance of a real operating air-cooled organic Rankine cycle binary geothermal power plant (GPP and its components in the aspects of thermodynamic modeling, exergy analysis and optimization processes. In-depth information is obtained about the exergy (maximum work a system can make, exergy losses and destruction at the power plant and its components. Thus the performance of the power plant may be predicted with reasonable accuracy and better understanding is gained for the physical process to be used in improving the performance of the power plant. The results of the exergy analysis show that total exergy production rate and exergy efficiency of the GPP are 21 MW and 14.52%, respectively, after removing parasitic loads. The highest amount of exergy destruction occurs, respectively, in condenser 2, vaporizer HH2, condenser 1, pumps 1 and 2 as components requiring priority performance improvement. To maximize the system exergy efficiency, the artificial bee colony (ABC is applied to the model that simulates the actual GPP. Under all the optimization conditions, the maximum exergy efficiency for the GPP and its components is obtained. Two of these conditions such as Case 4 related to the turbine and Case 12 related to the condenser have the best performance. As a result, the ABC optimization method provides better quality information than exergy analysis. Based on the guidance of this study, the performance of power plants based on geothermal energy and other energy resources may be improved.

  20. Modeling Design Iteration in Product Design and Development and Its Solution by a Novel Artificial Bee Colony Algorithm

    Science.gov (United States)

    2014-01-01

    Due to fierce market competition, how to improve product quality and reduce development cost determines the core competitiveness of enterprises. However, design iteration generally causes increases of product cost and delays of development time as well, so how to identify and model couplings among tasks in product design and development has become an important issue for enterprises to settle. In this paper, the shortcomings existing in WTM model are discussed and tearing approach as well as inner iteration method is used to complement the classic WTM model. In addition, the ABC algorithm is also introduced to find out the optimal decoupling schemes. In this paper, firstly, tearing approach and inner iteration method are analyzed for solving coupled sets. Secondly, a hybrid iteration model combining these two technologies is set up. Thirdly, a high-performance swarm intelligence algorithm, artificial bee colony, is adopted to realize problem-solving. Finally, an engineering design of a chemical processing system is given in order to verify its reasonability and effectiveness. PMID:25431584

  1. Protein folding optimization based on 3D off-lattice model via an improved artificial bee colony algorithm.

    Science.gov (United States)

    Li, Bai; Lin, Mu; Liu, Qiao; Li, Ya; Zhou, Changjun

    2015-10-01

    Protein folding is a fundamental topic in molecular biology. Conventional experimental techniques for protein structure identification or protein folding recognition require strict laboratory requirements and heavy operating burdens, which have largely limited their applications. Alternatively, computer-aided techniques have been developed to optimize protein structures or to predict the protein folding process. In this paper, we utilize a 3D off-lattice model to describe the original protein folding scheme as a simplified energy-optimal numerical problem, where all types of amino acid residues are binarized into hydrophobic and hydrophilic ones. We apply a balance-evolution artificial bee colony (BE-ABC) algorithm as the minimization solver, which is featured by the adaptive adjustment of search intensity to cater for the varying needs during the entire optimization process. In this work, we establish a benchmark case set with 13 real protein sequences from the Protein Data Bank database and evaluate the convergence performance of BE-ABC algorithm through strict comparisons with several state-of-the-art ABC variants in short-term numerical experiments. Besides that, our obtained best-so-far protein structures are compared to the ones in comprehensive previous literature. This study also provides preliminary insights into how artificial intelligence techniques can be applied to reveal the dynamics of protein folding. Graphical Abstract Protein folding optimization using 3D off-lattice model and advanced optimization techniques.

  2. A novel hybrid approach based on Particle Swarm Optimization and Ant Colony Algorithm to forecast energy demand of Turkey

    International Nuclear Information System (INIS)

    Kıran, Mustafa Servet; Özceylan, Eren; Gündüz, Mesut; Paksoy, Turan

    2012-01-01

    Highlights: ► PSO and ACO algorithms are hybridized for forecasting energy demands of Turkey. ► Linear and quadratic forms are developed to meet the fluctuations of indicators. ► GDP, population, export and import have significant impacts on energy demand. ► Quadratic form provides better fit solution than linear form. ► Proposed approach gives lower estimation error than ACO and PSO, separately. - Abstract: This paper proposes a new hybrid method (HAP) for estimating energy demand of Turkey using Particle Swarm Optimization (PSO) and Ant Colony Optimization (ACO). Proposed energy demand model (HAPE) is the first model which integrates two mentioned meta-heuristic techniques. While, PSO, developed for solving continuous optimization problems, is a population based stochastic technique; ACO, simulating behaviors between nest and food source of real ants, is generally used for discrete optimizations. Hybrid method based PSO and ACO is developed to estimate energy demand using gross domestic product (GDP), population, import and export. HAPE is developed in two forms which are linear (HAPEL) and quadratic (HAPEQ). The future energy demand is estimated under different scenarios. In order to show the accuracy of the algorithm, a comparison is made with ACO and PSO which are developed for the same problem. According to obtained results, relative estimation errors of the HAPE model are the lowest of them and quadratic form (HAPEQ) provides better-fit solutions due to fluctuations of the socio-economic indicators.

  3. Speed control of switched reluctance motor using genetic algorithm and ant colony based on optimizing PID controller

    Directory of Open Access Journals (Sweden)

    El-Sayed Ahmed Ibrahim Hassan

    2018-01-01

    Full Text Available Proportional-Integral-Derivative control is the most used kind of control which provides the simplest and most effective solution to different kinds of control engineering applications. But until now PID controller is poorly tuned in real life and online applications. While most of PID tuning is done manually. Switched reluctance motor (SRM has highly nonlinear characteristics since the developed/produced torque of the motor has a nonlinear function on both phase current and rotor position. These nonlinearities of the SRM drives make the conventional PID (proportional + integral + Derivative controller a poor choice for application where high dynamic performance is desired under all motor operating conditions. research paper comes up with two artificial and hybrid techniques involving Genetic Algorithm (GA and Ant Colony Optimization (ACO. Those techniques where used to tune the PID parameters for the switched reluctance motor (SRM and its performance were compared with the conventional method of “Ziegler Nichols. The results obtained reflects that, the use of those algorithms based controller improves the performance of the whole process in terms of a fast set point tracking and regulatory changes and also provides an optimum stability for the system itself with a minimum overshoot on the output signal.

  4. Spectrum aware fuzzy clustering algorithm for cognative radio ...

    African Journals Online (AJOL)

    This paper proposes a SAFCA for a self-organized CH selection within a CRSN. The algorithm caters CR and WSN constraints by exploiting the dynamic spectrum access and fuzzy inference technique for an energy efficient CRSN. It utilizes channel availability and fuzzy parameters of residual energy, communication cost ...

  5. Clustering Batik Images using Fuzzy C-Means Algorithm Based on Log-Average Luminance

    Directory of Open Access Journals (Sweden)

    Ahmad Sanmorino

    2012-06-01

    Full Text Available Batik is a fabric or clothes that are made ​​with a special staining technique called wax-resist dyeing and is one of the cultural heritage which has high artistic value. In order to improve the efficiency and give better semantic to the image, some researchers apply clustering algorithm for managing images before they can be retrieved. Image clustering is a process of grouping images based on their similarity. In this paper we attempt to provide an alternative method of grouping batik image using fuzzy c-means (FCM algorithm based on log-average luminance of the batik. FCM clustering algorithm is an algorithm that works using fuzzy models that allow all data from all cluster members are formed with different degrees of membership between 0 and 1. Log-average luminance (LAL is the average value of the lighting in an image. We can compare different image lighting from one image to another using LAL. From the experiments that have been made, it can be concluded that fuzzy c-means algorithm can be used for batik image clustering based on log-average luminance of each image possessed.

  6. Fuzzy-rough supervised attribute clustering algorithm and classification of microarray data.

    Science.gov (United States)

    Maji, Pradipta

    2011-02-01

    One of the major tasks with gene expression data is to find groups of coregulated genes whose collective expression is strongly associated with sample categories. In this regard, a new clustering algorithm, termed as fuzzy-rough supervised attribute clustering (FRSAC), is proposed to find such groups of genes. The proposed algorithm is based on the theory of fuzzy-rough sets, which directly incorporates the information of sample categories into the gene clustering process. A new quantitative measure is introduced based on fuzzy-rough sets that incorporates the information of sample categories to measure the similarity among genes. The proposed algorithm is based on measuring the similarity between genes using the new quantitative measure, whereby redundancy among the genes is removed. The clusters are refined incrementally based on sample categories. The effectiveness of the proposed FRSAC algorithm, along with a comparison with existing supervised and unsupervised gene selection and clustering algorithms, is demonstrated on six cancer and two arthritis data sets based on the class separability index and predictive accuracy of the naive Bayes' classifier, the K-nearest neighbor rule, and the support vector machine.

  7. Protein Tertiary Structure Prediction Based on Main Chain Angle Using a Hybrid Bees Colony Optimization Algorithm

    Science.gov (United States)

    Mahmood, Zakaria N.; Mahmuddin, Massudi; Mahmood, Mohammed Nooraldeen

    Encoding proteins of amino acid sequence to predict classified into their respective families and subfamilies is important research area. However for a given protein, knowing the exact action whether hormonal, enzymatic, transmembranal or nuclear receptors does not depend solely on amino acid sequence but on the way the amino acid thread folds as well. This study provides a prototype system that able to predict a protein tertiary structure. Several methods are used to develop and evaluate the system to produce better accuracy in protein 3D structure prediction. The Bees Optimization algorithm which inspired from the honey bees food foraging method, is used in the searching phase. In this study, the experiment is conducted on short sequence proteins that have been used by the previous researches using well-known tools. The proposed approach shows a promising result.

  8. A New-Fangled FES-k-Means Clustering Algorithm for Disease Discovery and Visual Analytics.

    Science.gov (United States)

    Oyana, Tonny J

    2010-01-01

    The central purpose of this study is to further evaluate the quality of the performance of a new algorithm. The study provides additional evidence on this algorithm that was designed to increase the overall efficiency of the original k-means clustering technique-the Fast, Efficient, and Scalable k-means algorithm (FES-k-means). The FES-k-means algorithm uses a hybrid approach that comprises the k-d tree data structure that enhances the nearest neighbor query, the original k-means algorithm, and an adaptation rate proposed by Mashor. This algorithm was tested using two real datasets and one synthetic dataset. It was employed twice on all three datasets: once on data trained by the innovative MIL-SOM method and then on the actual untrained data in order to evaluate its competence. This two-step approach of data training prior to clustering provides a solid foundation for knowledge discovery and data mining, otherwise unclaimed by clustering methods alone. The benefits of this method are that it produces clusters similar to the original k-means method at a much faster rate as shown by runtime comparison data; and it provides efficient analysis of large geospatial data with implications for disease mechanism discovery. From a disease mechanism discovery perspective, it is hypothesized that the linear-like pattern of elevated blood lead levels discovered in the city of Chicago may be spatially linked to the city's water service lines.

  9. Channel Parameter Estimation for Scatter Cluster Model Using Modified MUSIC Algorithm

    Directory of Open Access Journals (Sweden)

    Jinsheng Yang

    2012-01-01

    Full Text Available Recently, the scatter cluster models which precisely evaluate the performance of the wireless communication system have been proposed in the literature. However, the conventional SAGE algorithm does not work for these scatter cluster-based models because it performs poorly when the transmit signals are highly correlated. In this paper, we estimate the time of arrival (TOA, the direction of arrival (DOA, and Doppler frequency for scatter cluster model by the modified multiple signal classification (MUSIC algorithm. Using the space-time characteristics of the multiray channel, the proposed algorithm combines the temporal filtering techniques and the spatial smoothing techniques to isolate and estimate the incoming rays. The simulation results indicated that the proposed algorithm has lower complexity and is less time-consuming in the dense multipath environment than SAGE algorithm. Furthermore, the estimations’ performance increases with elements of receive array and samples length. Thus, the problem of the channel parameter estimation of the scatter cluster model can be effectively addressed with the proposed modified MUSIC algorithm.

  10. Proposed Fuzzy-NN Algorithm with LoRaCommunication Protocol for Clustered Irrigation Systems

    Directory of Open Access Journals (Sweden)

    Sotirios Kontogiannis

    2017-11-01

    Full Text Available Modern irrigation systems utilize sensors and actuators, interconnected together as a single entity. In such entities, A.I. algorithms are implemented, which are responsible for the irrigation process. In this paper, the authors present an irrigation Open Watering System (OWS architecture that spatially clusters the irrigation process into autonomous irrigation sections. Authors’ OWS implementation includes a Neuro-Fuzzy decision algorithm called FITRA, which originates from the Greek word for seed. In this paper, the FITRA algorithm is described in detail, as are experimentation results that indicate significant water conservations from the use of the FITRA algorithm. Furthermore, the authors propose a new communication protocol over LoRa radio as an alternative low-energy and long-range OWS clusters communication mechanism. The experimental scenarios confirm that the FITRA algorithm provides more efficient irrigation on clustered areas than existing non-clustered, time scheduled or threshold adaptive algorithms. This is due to the FITRA algorithm’s frequent monitoring of environmental conditions, fuzzy and neural network adaptation as well as adherence to past irrigation preferences.

  11. A New-Fangled FES-k-Means Clustering Algorithm for Disease Discovery and Visual Analytics

    Directory of Open Access Journals (Sweden)

    Tonny J. Oyana

    2010-01-01

    Full Text Available The central purpose of this study is to further evaluate the quality of the performance of a new algorithm. The study provides additional evidence on this algorithm that was designed to increase the overall efficiency of the original k-means clustering technique—the Fast, Efficient, and Scalable k-means algorithm (FES-k-means. The FES-k-means algorithm uses a hybrid approach that comprises the k-d tree data structure that enhances the nearest neighbor query, the original k-means algorithm, and an adaptation rate proposed by Mashor. This algorithm was tested using two real datasets and one synthetic dataset. It was employed twice on all three datasets: once on data trained by the innovative MIL-SOM method and then on the actual untrained data in order to evaluate its competence. This two-step approach of data training prior to clustering provides a solid foundation for knowledge discovery and data mining, otherwise unclaimed by clustering methods alone. The benefits of this method are that it produces clusters similar to the original k-means method at a much faster rate as shown by runtime comparison data; and it provides efficient analysis of large geospatial data with implications for disease mechanism discovery. From a disease mechanism discovery perspective, it is hypothesized that the linear-like pattern of elevated blood lead levels discovered in the city of Chicago may be spatially linked to the city's water service lines.

  12. An efficient clustering algorithm for partitioning Y-short tandem repeats data

    Directory of Open Access Journals (Sweden)

    Seman Ali

    2012-10-01

    Full Text Available Abstract Background Y-Short Tandem Repeats (Y-STR data consist of many similar and almost similar objects. This characteristic of Y-STR data causes two problems with partitioning: non-unique centroids and local minima problems. As a result, the existing partitioning algorithms produce poor clustering results. Results Our new algorithm, called k-Approximate Modal Haplotypes (k-AMH, obtains the highest clustering accuracy scores for five out of six datasets, and produces an equal performance for the remaining dataset. Furthermore, clustering accuracy scores of 100% are achieved for two of the datasets. The k-AMH algorithm records the highest mean accuracy score of 0.93 overall, compared to that of other algorithms: k-Population (0.91, k-Modes-RVF (0.81, New Fuzzy k-Modes (0.80, k-Modes (0.76, k-Modes-Hybrid 1 (0.76, k-Modes-Hybrid 2 (0.75, Fuzzy k-Modes (0.74, and k-Modes-UAVM (0.70. Conclusions The partitioning performance of the k-AMH algorithm for Y-STR data is superior to that of other algorithms, owing to its ability to solve the non-unique centroids and local minima problems. Our algorithm is also efficient in terms of time complexity, which is recorded as O(km(n-k and considered to be linear.

  13. CLUSTERING CATEGORICAL DATA USING k-MODES BASED ON CUCKOO SEARCH OPTIMIZATION ALGORITHM

    Directory of Open Access Journals (Sweden)

    Lakshmi K

    2017-10-01

    Full Text Available Cluster analysis is the unsupervised learning technique that finds the interesting patterns in the data objects without knowing class labels. Most of the real world dataset consists of categorical data. For example, social media analysis may have the categorical data like the gender as male or female. The k-modes clustering algorithm is the most widely used to group the categorical data, because it is easy to implement and efficient to handle the large amount of data. However, due to its random selection of initial centroids, it provides the local optimum solution. There are number of optimization algorithms are developed to obtain global optimum solution. Cuckoo Search algorithm is the population based metaheuristic optimization algorithms to provide the global optimum solution. Methods: In this paper, k-modes clustering algorithm is combined with Cuckoo Search algorithm to obtain the global optimum solution. Results: Experiments are conducted with benchmark datasets and the results are compared with k-modes and Particle Swarm Optimization with k-modes to prove the efficiency of the proposed algorithm.

  14. Using Improved Ant Colony Algorithm to Investigate EMU Circulation Scheduling Problem

    Directory of Open Access Journals (Sweden)

    Yu Zhou

    2014-01-01

    Full Text Available High-speed railway is one of the most important ways to solve the long-standing travel difficulty problem in China. However, due to the high acquisition and maintenance cost, it is impossible for decision-making departments to purchase enough EMUs to satisfy the explosive travel demand. Therefore, there is an urgent need to study how to utilize EMU more efficiently and reduce costs in the case of completing a given task in train diagram. In this paper, an EMU circulation scheduling model is built based on train diagram constraints, maintenance constraints, and so forth; in the model solving process, an improved ACA algorithm has been designed. A case study is conducted to verify the feasibility of the model. Moreover, contrast tests have been carried out to compare the efficiency between the improved ACA and the traditional approaches. The results reveal that improved ACA method can solve the model with less time and the quality of each representative index is much better, which means that efficiency of the improved ACA method is higher and better scheduling scheme can be obtained.

  15. An Improved Clustering Method for Detection System of Public Security Events Based on Genetic Algorithm and Semisupervised Learning

    Directory of Open Access Journals (Sweden)

    Heng Wang

    2017-01-01

    Full Text Available The occurrence of series of events is always associated with the news report, social network, and Internet media. In this paper, a detecting system for public security events is designed, which carries out clustering operation to cluster relevant text data, in order to benefit relevant departments by evaluation and handling. Firstly, texts are mapped into three-dimensional space using the vector space model. Then, to overcome the shortcoming of the traditional clustering algorithm, an improved fuzzy c-means (FCM algorithm based on adaptive genetic algorithm and semisupervised learning is proposed. In the proposed algorithm, adaptive genetic algorithm is employed to select optimal initial clustering centers. Meanwhile, motivated by semisupervised learning, guiding effect of prior knowledge is used to accelerate iterative process. Finally, simulation experiments are conducted from two aspects of qualitative analysis and quantitative analysis, which demonstrate that the proposed algorithm performs excellently in improving clustering centers, clustering results, and consuming time.

  16. Risk Assessment for Bridges Safety Management during Operation Based on Fuzzy Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    Xia Hanyu

    2016-01-01

    Full Text Available In recent years, large span and large sea-crossing bridges are built, bridges accidents caused by improper operational management occur frequently. In order to explore the better methods for risk assessment of the bridges operation departments, the method based on fuzzy clustering algorithm is selected. Then, the implementation steps of fuzzy clustering algorithm are described, the risk evaluation system is built, and Taizhou Bridge is selected as an example, the quantitation of risk factors is described. After that, the clustering algorithm based on fuzzy equivalence is calculated on MATLAB 2010a. In the last, Taizhou Bridge operation management departments are classified and sorted according to the degree of risk, and the safety situation of operation departments is analyzed.

  17. Study on Data Clustering and Intelligent Decision Algorithm of Indoor Localization

    Science.gov (United States)

    Liu, Zexi

    2018-01-01

    Indoor positioning technology enables the human beings to have the ability of positional perception in architectural space, and there is a shortage of single network coverage and the problem of location data redundancy. So this article puts forward the indoor positioning data clustering algorithm and intelligent decision-making research, design the basic ideas of multi-source indoor positioning technology, analyzes the fingerprint localization algorithm based on distance measurement, position and orientation of inertial device integration. By optimizing the clustering processing of massive indoor location data, the data normalization pretreatment, multi-dimensional controllable clustering center and multi-factor clustering are realized, and the redundancy of locating data is reduced. In addition, the path is proposed based on neural network inference and decision, design the sparse data input layer, the dynamic feedback hidden layer and output layer, low dimensional results improve the intelligent navigation path planning.

  18. A Game Theory Algorithm for Intra-Cluster Data Aggregation in a Vehicular Ad Hoc Network.

    Science.gov (United States)

    Chen, Yuzhong; Weng, Shining; Guo, Wenzhong; Xiong, Naixue

    2016-02-19

    Vehicular ad hoc networks (VANETs) have an important role in urban management and planning. The effective integration of vehicle information in VANETs is critical to traffic analysis, large-scale vehicle route planning and intelligent transportation scheduling. However, given the limitations in the precision of the output information of a single sensor and the difficulty of information sharing among various sensors in a highly dynamic VANET, effectively performing data aggregation in VANETs remains a challenge. Moreover, current studies have mainly focused on data aggregation in large-scale environments but have rarely discussed the issue of intra-cluster data aggregation in VANETs. In this study, we propose a multi-player game theory algorithm for intra-cluster data aggregation in VANETs by analyzing the competitive and cooperative relationships among sensor nodes. Several sensor-centric metrics are proposed to measure the data redundancy and stability of a cluster. We then study the utility function to achieve efficient intra-cluster data aggregation by considering both data redundancy and cluster stability. In particular, we prove the existence of a unique Nash equilibrium in the game model, and conduct extensive experiments to validate the proposed algorithm. Results demonstrate that the proposed algorithm has advantages over typical data aggregation algorithms in both accuracy and efficiency.

  19. A Game Theory Algorithm for Intra-Cluster Data Aggregation in a Vehicular Ad Hoc Network

    Directory of Open Access Journals (Sweden)

    Yuzhong Chen

    2016-02-01

    Full Text Available Vehicular ad hoc networks (VANETs have an important role in urban management and planning. The effective integration of vehicle information in VANETs is critical to traffic analysis, large-scale vehicle route planning and intelligent transportation scheduling. However, given the limitations in the precision of the output information of a single sensor and the difficulty of information sharing among various sensors in a highly dynamic VANET, effectively performing data aggregation in VANETs remains a challenge. Moreover, current studies have mainly focused on data aggregation in large-scale environments but have rarely discussed the issue of intra-cluster data aggregation in VANETs. In this study, we propose a multi-player game theory algorithm for intra-cluster data aggregation in VANETs by analyzing the competitive and cooperative relationships among sensor nodes. Several sensor-centric metrics are proposed to measure the data redundancy and stability of a cluster. We then study the utility function to achieve efficient intra-cluster data aggregation by considering both data redundancy and cluster stability. In particular, we prove the existence of a unique Nash equilibrium in the game model, and conduct extensive experiments to validate the proposed algorithm. Results demonstrate that the proposed algorithm has advantages over typical data aggregation algorithms in both accuracy and efficiency.

  20. A Fusion Method of Gabor Wavelet Transform and Unsupervised Clustering Algorithms for Tissue Edge Detection

    Directory of Open Access Journals (Sweden)

    Burhan Ergen

    2014-01-01

    Full Text Available This paper proposes two edge detection methods for medical images by integrating the advantages of Gabor wavelet transform (GWT and unsupervised clustering algorithms. The GWT is used to enhance the edge information in an image while suppressing noise. Following this, the k-means and Fuzzy c-means (FCM clustering algorithms are used to convert a gray level image into a binary image. The proposed methods are tested using medical images obtained through Computed Tomography (CT and Magnetic Resonance Imaging (MRI devices, and a phantom image. The results prove that the proposed methods are successful for edge detection, even in noisy cases.

  1. Optimal Selection of Clustering Algorithm via Multi-Criteria Decision Analysis (MCDA for Load Profiling Applications

    Directory of Open Access Journals (Sweden)

    Ioannis P. Panapakidis

    2018-02-01

    Full Text Available Due to high implementation rates of smart meter systems, considerable amount of research is placed in machine learning tools for data handling and information retrieval. A key tool in load data processing is clustering. In recent years, a number of researches have proposed different clustering algorithms in the load profiling field. The present paper provides a methodology for addressing the aforementioned problem through Multi-Criteria Decision Analysis (MCDA and namely, using the Technique for Order of Preference by Similarity to Ideal Solution (TOPSIS. A comparison of the algorithms is employed. Next, a single test case on the selection of an algorithm is examined. User specific weights are applied and based on these weight values, the optimal algorithm is drawn.

  2. Segmentation of Mushroom and Cap width Measurement using Modified K-Means Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    Eser Sert

    2014-01-01

    Full Text Available Mushroom is one of the commonly consumed foods. Image processing is one of the effective way for examination of visual features and detecting the size of a mushroom. We developed software for segmentation of a mushroom in a picture and also to measure the cap width of the mushroom. K-Means clustering method is used for the process. K-Means is one of the most successful clustering methods. In our study we customized the algorithm to get the best result and tested the algorithm. In the system, at first mushroom picture is filtered, histograms are balanced and after that segmentation is performed. Results provided that customized algorithm performed better segmentation than classical K-Means algorithm. Tests performed on the designed software showed that segmentation on complex background pictures is performed with high accuracy, and 20 mushrooms caps are measured with 2.281 % relative error.

  3. A harmony search algorithm for clustering with feature selection

    Directory of Open Access Journals (Sweden)

    Carlos Cobos

    2010-01-01

    Full Text Available En este artículo se presenta un nuevo algoritmo de clustering denominado IHSK, con la capacidad de seleccionar características en un orden de complejidad lineal. El algoritmo es inspirado en la combinación de los algoritmos de búsqueda armónica y K-means. Para la selección de las características se usó el concepto de variabilidad y un método heurístico que penaliza la presencia de dimensiones con baja probabilidad de aportar en la solución actual. El algoritmo fue probado con conjuntos de datos sintéticos y reales, obteniendo resultados prometedores.

  4. Fuzzy Clustering Means Algorithm for Track Fusion in U.S. Coast Guard Vessel Traffic Service Systems

    National Research Council Canada - National Science Library

    Anzano, Eugenio

    1999-01-01

    .... The proposed algorithm uses the Fuzzy Clustering Means (FCM) algorithm to reduce the number of target tracks and associate duplicate tracks by determining the degree of membership for each target track...

  5. The modification of hybrid method of ant colony optimization, particle swarm optimization and 3-OPT algorithm in traveling salesman problem

    Science.gov (United States)

    Hertono, G. F.; Ubadah; Handari, B. D.

    2018-03-01

    The traveling salesman problem (TSP) is a famous problem in finding the shortest tour to visit every vertex exactly once, except the first vertex, given a set of vertices. This paper discusses three modification methods to solve TSP by combining Ant Colony Optimization (ACO), Particle Swarm Optimization (PSO) and 3-Opt Algorithm. The ACO is used to find the solution of TSP, in which the PSO is implemented to find the best value of parameters α and β that are used in ACO.In order to reduce the total of tour length from the feasible solution obtained by ACO, then the 3-Opt will be used. In the first modification, the 3-Opt is used to reduce the total tour length from the feasible solutions obtained at each iteration, meanwhile, as the second modification, 3-Opt is used to reduce the total tour length from the entire solution obtained at every iteration. In the third modification, 3-Opt is used to reduce the total tour length from different solutions obtained at each iteration. Results are tested using 6 benchmark problems taken from TSPLIB by calculating the relative error to the best known solution as well as the running time. Among those modifications, only the second and third modification give satisfactory results except the second one needs more execution time compare to the third modifications.

  6. Ant colony algorithm implementation in electron and photon Monte Carlo transport: Application to the commissioning of radiosurgery photon beams

    International Nuclear Information System (INIS)

    Garcia-Pareja, S.; Galan, P.; Manzano, F.; Brualla, L.; Lallena, A. M.

    2010-01-01

    Purpose: In this work, the authors describe an approach which has been developed to drive the application of different variance-reduction techniques to the Monte Carlo simulation of photon and electron transport in clinical accelerators. Methods: The new approach considers the following techniques: Russian roulette, splitting, a modified version of the directional bremsstrahlung splitting, and the azimuthal particle redistribution. Their application is controlled by an ant colony algorithm based on an importance map. Results: The procedure has been applied to radiosurgery beams. Specifically, the authors have calculated depth-dose profiles, off-axis ratios, and output factors, quantities usually considered in the commissioning of these beams. The agreement between Monte Carlo results and the corresponding measurements is within ∼3%/0.3 mm for the central axis percentage depth dose and the dose profiles. The importance map generated in the calculation can be used to discuss simulation details in the different parts of the geometry in a simple way. The simulation CPU times are comparable to those needed within other approaches common in this field. Conclusions: The new approach is competitive with those previously used in this kind of problems (PSF generation or source models) and has some practical advantages that make it to be a good tool to simulate the radiation transport in problems where the quantities of interest are difficult to obtain because of low statistics.

  7. Ant colony algorithm implementation in electron and photon Monte Carlo transport: Application to the commissioning of radiosurgery photon beams

    Energy Technology Data Exchange (ETDEWEB)

    Garcia-Pareja, S.; Galan, P.; Manzano, F.; Brualla, L.; Lallena, A. M. [Servicio de Radiofisica Hospitalaria, Hospital Regional Universitario ' ' Carlos Haya' ' , Avda. Carlos Haya s/n, E-29010 Malaga (Spain); Unidad de Radiofisica Hospitalaria, Hospital Xanit Internacional, Avda. de los Argonautas s/n, E-29630 Benalmadena (Malaga) (Spain); NCTeam, Strahlenklinik, Universitaetsklinikum Essen, Hufelandstr. 55, D-45122 Essen (Germany); Departamento de Fisica Atomica, Molecular y Nuclear, Universidad de Granada, E-18071 Granada (Spain)

    2010-07-15

    Purpose: In this work, the authors describe an approach which has been developed to drive the application of different variance-reduction techniques to the Monte Carlo simulation of photon and electron transport in clinical accelerators. Methods: The new approach considers the following techniques: Russian roulette, splitting, a modified version of the directional bremsstrahlung splitting, and the azimuthal particle redistribution. Their application is controlled by an ant colony algorithm based on an importance map. Results: The procedure has been applied to radiosurgery beams. Specifically, the authors have calculated depth-dose profiles, off-axis ratios, and output factors, quantities usually considered in the commissioning of these beams. The agreement between Monte Carlo results and the corresponding measurements is within {approx}3%/0.3 mm for the central axis percentage depth dose and the dose profiles. The importance map generated in the calculation can be used to discuss simulation details in the different parts of the geometry in a simple way. The simulation CPU times are comparable to those needed within other approaches common in this field. Conclusions: The new approach is competitive with those previously used in this kind of problems (PSF generation or source models) and has some practical advantages that make it to be a good tool to simulate the radiation transport in problems where the quantities of interest are difficult to obtain because of low statistics.

  8. Clustering and Candidate Motif Detection in Exosomal miRNAs by Application of Machine Learning Algorithms.

    Science.gov (United States)

    Gaur, Pallavi; Chaturvedi, Anoop

    2017-07-22

    The clustering pattern and motifs give immense information about any biological data. An application of machine learning algorithms for clustering and candidate motif detection in miRNAs derived from exosomes is depicted in this paper. Recent progress in the field of exosome research and more particularly regarding exosomal miRNAs has led much bioinformatic-based research to come into existence. The information on clustering pattern and candidate motifs in miRNAs of exosomal origin would help in analyzing existing, as well as newly discovered miRNAs within exosomes. Along with obtaining clustering pattern and candidate motifs in exosomal miRNAs, this work also elaborates the usefulness of the machine learning algorithms that can be efficiently used and executed on various programming languages/platforms. Data were clustered and sequence candidate motifs were detected successfully. The results were compared and validated with some available web tools such as 'BLASTN' and 'MEME suite'. The machine learning algorithms for aforementioned objectives were applied successfully. This work elaborated utility of machine learning algorithms and language platforms to achieve the tasks of clustering and candidate motif detection in exosomal miRNAs. With the information on mentioned objectives, deeper insight would be gained for analyses of newly discovered miRNAs in exosomes which are considered to be circulating biomarkers. In addition, the execution of machine learning algorithms on various language platforms gives more flexibility to users to try multiple iterations according to their requirements. This approach can be applied to other biological data-mining tasks as well.

  9. An Effective Tri-Clustering Algorithm Combining Expression Data with Gene Regulation Information

    Directory of Open Access Journals (Sweden)

    Ao Li

    2009-04-01

    Full Text Available Motivation: Bi-clustering algorithms aim to identify sets of genes sharing similar expression patterns across a subset of conditions. However direct interpretation or prediction of gene regulatory mechanisms may be difficult as only gene expression data is used. Information about gene regulators may also be available, most commonly about which transcription factors may bind to the promoter region and thus control the expression level of a gene. Thus a method to integrate gene expression and gene regulation information is desirable for clustering and analyzing. Methods: By incorporating gene regulatory information with gene expression data, we define regulated expression values (REV as indicators of how a gene is regulated by a specific factor. Existing bi-clustering methods are extended to a three dimensional data space by developing a heuristic TRI-Clustering algorithm. An additional approach named Automatic Boundary Searching algorithm (ABS is introduced to automatically determine the boundary threshold. Results: Results based on incorporating ChIP-chip data representing transcription factor-gene interactions show that the algorithms are efficient and robust for detecting tri-clusters. Detailed analysis of the tri-cluster extracted from yeast sporulation REV data shows genes in this cluster exhibited significant differences during the middle and late stages. The implicated regulatory network was then reconstructed for further study of defined regulatory mechanisms. Topological and statistical analysis of this network demonstrated evidence of significant changes of TF activities during the different stages of yeast sporulation, and suggests this approach might be a general way to study regulatory networks undergoing transformations.

  10. Chaos control of ferroresonance system based on RBF-maximum entropy clustering algorithm

    International Nuclear Information System (INIS)

    Liu Fan; Sun Caixin; Sima Wenxia; Liao Ruijin; Guo Fei

    2006-01-01

    With regards to the ferroresonance overvoltage of neutral grounded power system, a maximum-entropy learning algorithm based on radial basis function neural networks is used to control the chaotic system. The algorithm optimizes the object function to derive learning rule of central vectors, and uses the clustering function of network hidden layers. It improves the regression and learning ability of neural networks. The numerical experiment of ferroresonance system testifies the effectiveness and feasibility of using the algorithm to control chaos in neutral grounded system

  11. SEGMENTATION OF HYPERSPECTRAL IMAGE USING JSEG BASED ON UNSUPERVISED CLUSTERING ALGORITHMS

    Directory of Open Access Journals (Sweden)

    V. Saravana Kumar

    2016-11-01

    Full Text Available Hyperspectral image analysis is a complicated and challenging task due to the inherent nature of the image. The main aim of this work is to segment the object in hyperspectral scene using image processing technique. This paper address a novel approach entitled as Segmentation of hyperspectral image using JSEG based on unsupervised cluster methods. In the preprocessing part, single band is picked out from the hyperspectral image and then converts into false color image. The JSEG algorithm is segregate the false color image properly without manual parameter adjustment. The segmentation has carried in two major stages. To begin with, colors in the image are quantized to represent several classes which can be used to differentiate regions in the image. Besides, hit rate regions with cognate color regions merging algorithm is used. In region merging part, K-means, Fuzzy C-Means (FCM and Fast K-Means weighted option (FWKM algorithm are used to segregate the image in accordance with the color for each cluster and its neighborhoods. Experiment results of above clustering method could be analyzed in terms of mean, standard deviation, number of cluster, number of pixels, time taken, number of objects occur in the resultant image. FWKM algorithm results yields good performance than its counterparts.

  12. A Multilevel Gamma-Clustering Layout Algorithm for Visualization of Biological Networks

    Science.gov (United States)

    Hruz, Tomas; Lucas, Christoph; Laule, Oliver; Zimmermann, Philip

    2013-01-01

    Visualization of large complex networks has become an indispensable part of systems biology, where organisms need to be considered as one complex system. The visualization of the corresponding network is challenging due to the size and density of edges. In many cases, the use of standard visualization algorithms can lead to high running times and poorly readable visualizations due to many edge crossings. We suggest an approach that analyzes the structure of the graph first and then generates a new graph which contains specific semantic symbols for regular substructures like dense clusters. We propose a multilevel gamma-clustering layout visualization algorithm (MLGA) which proceeds in three subsequent steps: (i) a multilevel γ-clustering is used to identify the structure of the underlying network, (ii) the network is transformed to a tree, and (iii) finally, the resulting tree which shows the network structure is drawn using a variation of a force-directed algorithm. The algorithm has a potential to visualize very large networks because it uses modern clustering heuristics which are optimized for large graphs. Moreover, most of the edges are removed from the visual representation which allows keeping the overview over complex graphs with dense subgraphs. PMID:23864855

  13. An effective trust-based recommendation method using a novel graph clustering algorithm

    Science.gov (United States)

    Moradi, Parham; Ahmadian, Sajad; Akhlaghian, Fardin

    2015-10-01

    Recommender systems are programs that aim to provide personalized recommendations to users for specific items (e.g. music, books) in online sharing communities or on e-commerce sites. Collaborative filtering methods are important and widely accepted types of recommender systems that generate recommendations based on the ratings of like-minded users. On the other hand, these systems confront several inherent issues such as data sparsity and cold start problems, caused by fewer ratings against the unknowns that need to be predicted. Incorporating trust information into the collaborative filtering systems is an attractive approach to resolve these problems. In this paper, we present a model-based collaborative filtering method by applying a novel graph clustering algorithm and also considering trust statements. In the proposed method first of all, the problem space is represented as a graph and then a sparsest subgraph finding algorithm is applied on the graph to find the initial cluster centers. Then, the proposed graph clustering algorithm is performed to obtain the appropriate users/items clusters. Finally, the identified clusters are used as a set of neighbors to recommend unseen items to the current active user. Experimental results based on three real-world datasets demonstrate that the proposed method outperforms several state-of-the-art recommender system methods.

  14. Performance of a Real-time Multipurpose 2-Dimensional Clustering Algorithm Developed for the ATLAS Experiment

    CERN Document Server

    Gkaitatzis, Stamatios; The ATLAS collaboration

    2016-01-01

    In this paper the performance of the 2D pixel clustering algorithm developed for the Input Mezzanine card of the ATLAS Fast TracKer system is presented. Fast TracKer is an approved ATLAS upgrade that has the goal to provide a complete list of tracks to the ATLAS High Level Trigger for each level-1 accepted event, at up to 100 kHz event rate with a very small latency, in the order of 100 µs. The Input Mezzanine card is the input stage of the Fast TracKer system. Its role is to receive data from the silicon detector and perform real time clustering, thus to reduce the amount of data propagated to the subsequent processing levels with minimal information loss. We focus on the most challenging component on the Input Mezzanine card, the 2D clustering algorithm executed on the pixel data. We compare two different implementations of the algorithm. The first is one called the ideal one which searches clusters of pixels in the whole silicon module at once and calculates the cluster centroids exploiting the whole avai...

  15. Performance of a Real-time Multipurpose 2-Dimensional Clustering Algorithm Developed for the ATLAS Experiment

    CERN Document Server

    AUTHOR|(INSPIRE)INSPIRE-00372074; The ATLAS collaboration; Sotiropoulou, Calliope Louisa; Annovi, Alberto; Kordas, Kostantinos

    2016-01-01

    In this paper the performance of the 2D pixel clustering algorithm developed for the Input Mezzanine card of the ATLAS Fast TracKer system is presented. Fast TracKer is an approved ATLAS upgrade that has the goal to provide a complete list of tracks to the ATLAS High Level Trigger for each level-1 accepted event, at up to 100 kHz event rate with a very small latency, in the order of 100µs. The Input Mezzanine card is the input stage of the Fast TracKer system. Its role is to receive data from the silicon detector and perform real time clustering, thus to reduce the amount of data propagated to the subsequent processing levels with minimal information loss. We focus on the most challenging component on the Input Mezzanine card, the 2D clustering algorithm executed on the pixel data. We compare two different implementations of the algorithm. The first is one called the ideal one which searches clusters of pixels in the whole silicon module at once and calculates the cluster centroids exploiting the whole avail...

  16. BMI optimization by using parallel UNDX real-coded genetic algorithm with Beowulf cluster

    Science.gov (United States)

    Handa, Masaya; Kawanishi, Michihiro; Kanki, Hiroshi

    2007-12-01

    This paper deals with the global optimization algorithm of the Bilinear Matrix Inequalities (BMIs) based on the Unimodal Normal Distribution Crossover (UNDX) GA. First, analyzing the structure of the BMIs, the existence of the typical difficult structures is confirmed. Then, in order to improve the performance of algorithm, based on results of the problem structures analysis and consideration of BMIs characteristic properties, we proposed the algorithm using primary search direction with relaxed Linear Matrix Inequality (LMI) convex estimation. Moreover, in these algorithms, we propose two types of evaluation methods for GA individuals based on LMI calculation considering BMI characteristic properties more. In addition, in order to reduce computational time, we proposed parallelization of RCGA algorithm, Master-Worker paradigm with cluster computing technique.

  17. Performance evaluation of simple linear iterative clustering algorithm on medical image processing.

    Science.gov (United States)

    Cong, Jinyu; Wei, Benzheng; Yin, Yilong; Xi, Xiaoming; Zheng, Yuanjie

    2014-01-01

    Simple Linear Iterative Clustering (SLIC) algorithm is increasingly applied to different kinds of image processing because of its excellent perceptually meaningful characteristics. In order to better meet the needs of medical image processing and provide technical reference for SLIC on the application of medical image segmentation, two indicators of boundary accuracy and superpixel uniformity are introduced with other indicators to systematically analyze the performance of SLIC algorithm, compared with Normalized cuts and Turbopixels algorithm. The extensive experimental results show that SLIC is faster and less sensitive to the image type and the setting superpixel number than other similar algorithms such as Turbopixels and Normalized cuts algorithms. And it also has a great benefit to the boundary recall, the robustness of fuzzy boundary, the setting superpixel size and the segmentation performance on medical image segmentation.

  18. An Initial Seed Selection Algorithm for K-means Clustering of Georeferenced Data to Improve Replicability of Cluster Assignments for Mapping Application

    OpenAIRE

    Khan, Fouad

    2016-01-01

    K-means is one of the most widely used clustering algorithms in various disciplines, especially for large datasets. However the method is known to be highly sensitive to initial seed selection of cluster centers. K-means++ has been proposed to overcome this problem and has been shown to have better accuracy and computational efficiency than k-means. In many clustering problems though -such as when classifying georeferenced data for mapping applications- standardization of clustering methodolo...

  19. FRCA: a fuzzy relevance-based cluster head selection algorithm for wireless mobile ad-hoc sensor networks.

    Science.gov (United States)

    Lee, Chongdeuk; Jeong, Taegwon

    2011-01-01

    Clustering is an important mechanism that efficiently provides information for mobile nodes and improves the processing capacity of routing, bandwidth allocation, and resource management and sharing. Clustering algorithms can be based on such criteria as the battery power of nodes, mobility, network size, distance, speed and direction. Above all, in order to achieve good clustering performance, overhead should be minimized, allowing mobile nodes to join and leave without perturbing the membership of the cluster while preserving current cluster structure as much as possible. This paper proposes a Fuzzy Relevance-based Cluster head selection Algorithm (FRCA) to solve problems found in existing wireless mobile ad hoc sensor networks, such as the node distribution found in dynamic properties due to mobility and flat structures and disturbance of the cluster formation. The proposed mechanism uses fuzzy relevance to select the cluster head for clustering in wireless mobile ad hoc sensor networks. In the simulation implemented on the NS-2 simulator, the proposed FRCA is compared with algorithms such as the Cluster-based Routing Protocol (CBRP), the Weighted-based Adaptive Clustering Algorithm (WACA), and the Scenario-based Clustering Algorithm for Mobile ad hoc networks (SCAM). The simulation results showed that the proposed FRCA achieves better performance than that of the other existing mechanisms.

  20. Multispectral image compression algorithm based on spectral clustering and wavelet transform

    Science.gov (United States)

    Huang, Rong; Qiao, Weidong; Yang, Jianfeng; Wang, Hong; Xue, Bin; Tao, Jinyou

    2017-11-01

    In this paper, a method based on spectral clustering and the discrete wavelet transform (DWT) is proposed, which is based on the problem of the high degree of space-time redundancy in the current multispectral image compression algorithm. First, the spectral images are grouped by spectral clustering methods, and the clusters of similar heights are grouped together to remove the redundancy of the spectra. Then, wavelet transform and coding of the class representative are performed, and the space redundancy is eliminated, and the difference composition is applied to the Karhunen-Loeve transform (KLT) and wavelet transform. Experimental results show that with JPEG2000 and upon KLT + DWT algorithm, compared with the method has better peak signal-to-noise ratio and compression ratio, and it is suitable for compression of different spectral bands.

  1. An improved optimum-path forest clustering algorithm for remote sensing image segmentation

    Science.gov (United States)

    Chen, Siya; Sun, Tieli; Yang, Fengqin; Sun, Hongguang; Guan, Yu

    2018-03-01

    Remote sensing image segmentation is a key technology for processing remote sensing images. The image segmentation results can be used for feature extraction, target identification and object description. Thus, image segmentation directly affects the subsequent processing results. This paper proposes a novel Optimum-Path Forest (OPF) clustering algorithm that can be used for remote sensing segmentation. The method utilizes the principle that the cluster centres are characterized based on their densities and the distances between the centres and samples with higher densities. A new OPF clustering algorithm probability density function is defined based on this principle and applied to remote sensing image segmentation. Experiments are conducted using five remote sensing land cover images. The experimental results illustrate that the proposed method can outperform the original OPF approach.

  2. MixSim : An R Package for Simulating Data to Study Performance of Clustering Algorithms

    Directory of Open Access Journals (Sweden)

    Volodymyr Melnykov

    2012-11-01

    Full Text Available The R package MixSim is a new tool that allows simulating mixtures of Gaussian distributions with different levels of overlap between mixture components. Pairwise overlap, defined as a sum of two misclassification probabilities, measures the degree of interaction between components and can be readily employed to control the clustering complexity of datasets simulated from mixtures. These datasets can then be used for systematic performance investigation of clustering and finite mixture modeling algorithms. Among other capabilities of MixSim, there are computing the exact overlap for Gaussian mixtures, simulating Gaussian and non-Gaussian data, simulating outliers and noise variables, calculating various measures of agreement between two partitionings, and constructing parallel distribution plots for the graphical display of finite mixture models. All features of the package are illustrated in great detail. The utility of the package is highlighted through a small comparison study of several popular clustering algorithms.

  3. A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data

    Directory of Open Access Journals (Sweden)

    Tcha Hong

    2008-01-01

    Full Text Available Abstract Background The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a number of different ways to identify cell cycle dependent genes. In this study, we pose the hypothesis that cell cycle dependent genes are considered as oscillating systems with a rhythm, i.e. systems producing response signals with period and frequency. Therefore, we are motivated to apply the theory of multivariate phase synchronization for clustering cell cycle specific genome-wide expression data. Results We propose the strategy to find groups of genes according to the specific biological process by analyzing cell cycle specific gene expression data. To evaluate the propose method, we use the modified Kuramoto model, which is a phase governing equation that provides the long-term dynamics of globally coupled oscillators. With this equation, we simulate two groups of expression signals, and the simulated signals from each group shares their own common rhythm. Then, the simulated expression data are mixed with randomly generated expression data to be used as input data set to the algorithm. Using these simulated expression data, it is shown that the algorithm is able to identify expression signals that are involved in the same oscillating process. We also evaluate the method with yeast cell cycle expression data. It is shown that the output clusters by the proposed algorithm include genes, which are closely associated with each other by sharing significant Gene Ontology terms of biological process and/or having relatively many known biological interactions. Therefore, the evaluation analysis indicates that the method is able to identify expression signals according to the specific biological process. Our evaluation analysis also indicates that some portion of output by the proposed algorithm is not obtainable by the traditional clustering algorithm with

  4. Usage of Clustering Algorithm to Segment Image into Simply Connected Domains

    Directory of Open Access Journals (Sweden)

    S. V. Belim

    2015-01-01

    Full Text Available The article suggests a method of image segmentation into simply connected domains based on color. Pixels from an original image are represented as points in five-dimensional space which includes three color and two spatial coordinates. The points are normalized in order to eliminate distinguished characteristics. The set of points is compared with a weighted complete graph. The points of five-dimensional space are vertexes in the graph. Euclidian distance between the points is used as weights of the edges in the graph. To solve the task of clustering, a minimum spanning tree of the graph is built. For clustering, the tree is separated into sub-trees by removing some edges. Each sub-tree is a simply connected domain on the original image. In order to improve algorithm speed and reduce memory usage a greedy algorithm is used to build this minimum spanning tree for the graph. Edges to be removed are searched on the graph representing the length of an added edge versus a sequence number of its adding to the tree in the greedy algorithm. The desired edges are detected as maximums on the graphic. This search is based on assumption that transition to an adjacent cluster leads to connection of longer edge in comparison with edges within a cluster. Segmentation into clusters is iterative. At each step the bigger clusters are divided into smaller ones. It means that hierarchy of clusters can be built. A computer experiment was carried out using different images.The suggested method has no disadvantages of the most common method of k-means and allows dividing domains with different colors but the same intensity. Therewith there is no need to specify a number of clusters. Instead, it is necessary to choose a segmentation depth then a number of clusters will be automatically defined. The suggested method has no disadvantages of detection of image edges either. It is sufficient to find one point of image edge to separate two domains.A distinctive feature of

  5. Multidimensional Dynamic Programming Algorithm for N-Level Batching with Hierarchical Clustering Structure

    Directory of Open Access Journals (Sweden)

    Seung-Kil Lim

    2017-01-01

    Full Text Available This study focuses on the N-level batching problem with a hierarchical clustering structure. Clustering is the task of grouping a set of item types in such a way that item types in the same cluster are more similar (in some sense or another to each other than to those in other clusters. In hierarchical clustering structure, more and more different item types are clustered together as the level of the hierarchy increases. N-level batching is the process by which items with different types are grouped into several batches passed from level 1 to level N sequentially for given hierarchical clustering structure such that batches in each level should satisfy the maximum and minimum batch size requirements of the level. We consider two types of processing costs of the batches: unit processing cost and batch processing cost. We formulate the N-level batching problem with a hierarchical clustering structure as a nonlinear integer programming model with the objective of minimizing the total processing cost. To solve the problem optimally, we propose a multidimensional dynamic programming algorithm with an example.

  6. Towards an Evaluation of Air Surveillance Track Clustering Algorithms via External Cluster Quality Measures

    Science.gov (United States)

    2013-01-01

    internal cluster quality measures applied in the context of neurophysical experiments; specifically analysis of neuronal excitation recordings from...Recognised Air Picture ( RAP ) generated by RAAF 41 Wing. More precisely, the tracks were taken from an unclassified subset of the RAP . The subset covers the...post-processing The RAP is a real-time product generated by collating and fusing data from numerous sources and sensors, including civilian and

  7. A novel approach to speckle noise filtering based on Artificial Bee Colony algorithm: an ultrasound image application.

    Science.gov (United States)

    Latifoğlu, Fatma

    2013-09-01

    In this study a novel approach based on 2D FIR filters is presented for denoising digital images. In this approach the filter coefficients of 2D FIR filters were optimized using the Artificial Bee Colony (ABC) algorithm. To obtain the best filter design, the filter coefficients were tested with different numbers (3×3, 5×5, 7×7, 11×11) and connection types (cascade and parallel) during optimization. First, the speckle noise with variances of 1, 0.6, 0.8 and 0.2 respectively was added to the synthetic test image. Later, these noisy images were denoised with both the proposed approach and other well-known filter types such as Gaussian, mean and average filters. For image quality determination metrics such as mean square error (MSE), peak signal-to-noise ratio (PSNR) and signal-to-noise ratio (SNR) were used. Even in the case of noise having maximum variance (the most noisy), the proposed approach performed better than other filtering methods did on the noisy test images. In addition to test images, speckle noise with a variance of 1 was added to a fetal ultrasound image, and this noisy image was denoised with very high PSNR and SNR values. The performance of the proposed approach was also tested on several clinical ultrasound images such as those obtained from ovarian, abdomen and liver tissues. The results of this study showed that the 2D FIR filters designed based on ABC optimization can eliminate speckle noise quite well on noise added test images and intrinsically noisy ultrasound images. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

  8. The Hierarchical Spectral Merger Algorithm: A New Time Series Clustering Procedure

    KAUST Repository

    Euán, Carolina

    2018-04-12

    We present a new method for time series clustering which we call the Hierarchical Spectral Merger (HSM) method. This procedure is based on the spectral theory of time series and identifies series that share similar oscillations or waveforms. The extent of similarity between a pair of time series is measured using the total variation distance between their estimated spectral densities. At each step of the algorithm, every time two clusters merge, a new spectral density is estimated using the whole information present in both clusters, which is representative of all the series in the new cluster. The method is implemented in an R package HSMClust. We present two applications of the HSM method, one to data coming from wave-height measurements in oceanography and the other to electroencefalogram (EEG) data.

  9. Fast manifold spectral clustering algorithm for intelligent traffic remote sensing image fuzzy edge

    Science.gov (United States)

    Deng, Cong; Jia, Zelin; Li, Shen'an; Tang, Pengfei

    2017-09-01

    Intelligent transportation system is the future development of traffic systems. Higher precision map requires a higher absolute coordinate accuracy. However, cluster labels cloud be connected to the wrong pixels near the edges of regions, and edges will be misplaced. This paper proposed a fast Manifold Spectrum Clustering Algorithm for the fuzzy-edge of intelligent traffic remote sensing image. we first construct the fuzzy edge of remote sensing image, then analyze and evaluate the influence degree of the fuzzy edge on detailed image, and proposed a spectrum clustering method based on manifold to improve the accuracy and speed to obtain the fuzzy edge of the road in the high resolution remote sensing image. The simulation environment is built by Matlab 2015a, and it is proved that this paper is superior to the existing method in clustering speed and precision performance.

  10. Solving a Closed-Loop Location-Inventory-Routing Problem with Mixed Quality Defects Returns in E-Commerce by Hybrid Ant Colony Optimization Algorithm

    Directory of Open Access Journals (Sweden)

    Shuai Deng

    2016-01-01

    Full Text Available This paper presents a closed-loop location-inventory-routing problem model considering both quality defect returns and nondefect returns in e-commerce supply chain system. The objective is to minimize the total cost produced in both forward and reverse logistics networks. We propose a combined optimization algorithm named hybrid ant colony optimization algorithm (HACO to address this model that is an NP-hard problem. Our experimental results show that the proposed HACO is considerably efficient and effective in solving this model.

  11. The experimental results on the quality of clustering diverse set of data using a modified algorithm chameleon

    Directory of Open Access Journals (Sweden)

    Татьяна Борисовна Шатовская

    2015-03-01

    Full Text Available In this work results of modified Chameleon algorithm are discussed. Hierarchical multilevel algorithms consist of several stages: building the graph, coarsening, partitioning, recovering. Exploring of clustering quality for different data sets with different combinations of algorithms on different stages of the algorithm is the main aim of the article. And also aim is improving the construction phase through the optimization algorithm of choice k in the building the graph k-nearest neighbors

  12. A priori data-driven multi-clustered reservoir generation algorithm for echo state network.

    Directory of Open Access Journals (Sweden)

    Xiumin Li

    Full Text Available Echo state networks (ESNs with multi-clustered reservoir topology perform better in reservoir computing and robustness than those with random reservoir topology. However, these ESNs have a complex reservoir topology, which leads to difficulties in reservoir generation. This study focuses on the reservoir generation problem when ESN is used in environments with sufficient priori data available. Accordingly, a priori data-driven multi-cluster reservoir generation algorithm is proposed. The priori data in the proposed algorithm are used to evaluate reservoirs by calculating the precision and standard deviation of ESNs. The reservoirs are produced using the clustering method; only the reservoir with a better evaluation performance takes the place of a previous one. The final reservoir is obtained when its evaluation score reaches the preset requirement. The prediction experiment results obtained using the Mackey-Glass chaotic time series show that the proposed reservoir generation algorithm provides ESNs with extra prediction precision and increases the structure complexity of the network. Further experiments also reveal the appropriate values of the number of clusters and time window size to obtain optimal performance. The information entropy of the reservoir reaches the maximum when ESN gains the greatest precision.

  13. Fuzzy-Logic Based Distributed Energy-Efficient Clustering Algorithm for Wireless Sensor Networks.

    Science.gov (United States)

    Zhang, Ying; Wang, Jun; Han, Dezhi; Wu, Huafeng; Zhou, Rundong

    2017-07-03

    Due to the high-energy efficiency and scalability, the clustering routing algorithm has been widely used in wireless sensor networks (WSNs). In order to gather information more efficiently, each sensor node transmits data to its Cluster Head (CH) to which it belongs, by multi-hop communication. However, the multi-hop communication in the cluster brings the problem of excessive energy consumption of the relay nodes which are closer to the CH. These nodes' energy will be consumed more quickly than the farther nodes, which brings the negative influence on load balance for the whole networks. Therefore, we propose an energy-efficient distributed clustering algorithm based on fuzzy approach with non-uniform distribution (EEDCF). During CHs' election, we take nodes' energies, nodes' degree and neighbor nodes' residual energies into consideration as the input parameters. In addition, we take advantage of Takagi, Sugeno and Kang (TSK) fuzzy model instead of traditional method as our inference system to guarantee the quantitative analysis more reasonable. In our scheme, each sensor node calculates the probability of being as CH with the help of fuzzy inference system in a distributed way. The experimental results indicate EEDCF algorithm is better than some current representative methods in aspects of data transmission, energy consumption and lifetime of networks.

  14. Edge Detection in UAV Remote Sensing Images Using the Method Integrating Zernike Moments with Clustering Algorithms

    Directory of Open Access Journals (Sweden)

    Liang Huang

    2017-01-01

    Full Text Available Due to the unmanned aerial vehicle remote sensing images (UAVRSI within rich texture details of ground objects and obvious phenomenon, the same objects with different spectra, it is difficult to effectively acquire the edge information using traditional edge detection operator. To solve this problem, an edge detection method of UAVRSI by combining Zernike moments with clustering algorithms is proposed in this study. To begin with, two typical clustering algorithms, namely, fuzzy c-means (FCM and K-means algorithms, are used to cluster the original remote sensing images so as to form homogeneous regions in ground objects. Then, Zernike moments are applied to carry out edge detection on the remote sensing images clustered. Finally, visual comparison and sensitivity methods are adopted to evaluate the accuracy of the edge information detected. Afterwards, two groups of experimental data are selected to verify the proposed method. Results show that the proposed method effectively improves the accuracy of edge information extracted from remote sensing images.

  15. Fuzzy-Logic Based Distributed Energy-Efficient Clustering Algorithm for Wireless Sensor Networks

    Science.gov (United States)

    Zhang, Ying; Wang, Jun; Han, Dezhi; Wu, Huafeng; Zhou, Rundong

    2017-01-01

    Due to the high-energy efficiency and scalability, the clustering routing algorithm has been widely used in wireless sensor networks (WSNs). In order to gather information more efficiently, each sensor node transmits data to its Cluster Head (CH) to which it belongs, by multi-hop communication. However, the multi-hop communication in the cluster brings the problem of excessive energy consumption of the relay nodes which are closer to the CH. These nodes’ energy will be consumed more quickly than the farther nodes, which brings the negative influence on load balance for the whole networks. Therefore, we propose an energy-efficient distributed clustering algorithm based on fuzzy approach with non-uniform distribution (EEDCF). During CHs’ election, we take nodes’ energies, nodes’ degree and neighbor nodes’ residual energies into consideration as the input parameters. In addition, we take advantage of Takagi, Sugeno and Kang (TSK) fuzzy model instead of traditional method as our inference system to guarantee the quantitative analysis more reasonable. In our scheme, each sensor node calculates the probability of being as CH with the help of fuzzy inference system in a distributed way. The experimental results indicate EEDCF algorithm is better than some current representative methods in aspects of data transmission, energy consumption and lifetime of networks. PMID:28671641

  16. Cluster-Based Multipolling Sequencing Algorithm for Collecting RFID Data in Wireless LANs

    Science.gov (United States)

    Choi, Woo-Yong; Chatterjee, Mainak

    2015-03-01

    With the growing use of RFID (Radio Frequency Identification), it is becoming important to devise ways to read RFID tags in real time. Access points (APs) of IEEE 802.11-based wireless Local Area Networks (LANs) are being integrated with RFID networks that can efficiently collect real-time RFID data. Several schemes, such as multipolling methods based on the dynamic search algorithm and random sequencing, have been proposed. However, as the number of RFID readers associated with an AP increases, it becomes difficult for the dynamic search algorithm to derive the multipolling sequence in real time. Though multipolling methods can eliminate the polling overhead, we still need to enhance the performance of the multipolling methods based on random sequencing. To that extent, we propose a real-time cluster-based multipolling sequencing algorithm that drastically eliminates more than 90% of the polling overhead, particularly so when the dynamic search algorithm fails to derive the multipolling sequence in real time.

  17. A branch-and-cut SDP-based algorithm for minimum sum-of-squares clustering

    Directory of Open Access Journals (Sweden)

    Daniel Aloise

    2009-12-01

    Full Text Available Minimum sum-of-squares clustering (MSSC consists in partitioning a given set of n points into k clusters in order to minimize the sum of squared distances from the points to the centroid of their cluster. Recently, Peng & Xia (2005 established the equivalence between 0-1 semidefinite programming (SDP and MSSC. In this paper, we propose a branch-and-cut algorithm for the underlying 0-1 SDP model. The algorithm obtains exact solutions for fairly large data sets with computing times comparable with those of the best exact method found in the literature.Clusterização por soma mínima de distâncias quadráticas consiste em particionar um dado conjunto de n pontos em k clusters a fim de minimizar a soma das distâncias quadráticas entre os pontos e o centróide de seus respectivos clusters. Recentemente, Peng & Xia (2005 estabeleceram a equivalência entre o problema e programação semidefinida 0-1. Neste artigo, um algoritmo branch-and-cut é proposto para o modelo baseado em programação semidefinida 0-1. O algoritmo obtém soluções exatas para instâncias reais de grande porte em tempos computacionais comparáveis àqueles do melhor método exato proposto na literatura.

  18. An adaptive enhancement algorithm for infrared video based on modified k-means clustering

    Science.gov (United States)

    Zhang, Linze; Wang, Jingqi; Wu, Wen

    2016-09-01

    In this paper, we have proposed a video enhancement algorithm to improve the output video of the infrared camera. Sometimes the video obtained by infrared camera is very dark since there is no clear target. In this case, infrared video should be divided into frame images by frame extraction, in order to carry out the image enhancement. For the first frame image, which can be divided into k sub images by using K-means clustering according to the gray interval it occupies before k sub images' histogram equalization according to the amount of information per sub image, we used a method to solve a problem that final cluster centers close to each other in some cases; and for the other frame images, their initial cluster centers can be determined by the final clustering centers of the previous ones, and the histogram equalization of each sub image will be carried out after image segmentation based on K-means clustering. The histogram equalization can make the gray value of the image to the whole gray level, and the gray level of each sub image is determined by the ratio of pixels to a frame image. Experimental results show that this algorithm can improve the contrast of infrared video where night target is not obvious which lead to a dim scene, and reduce the negative effect given by the overexposed pixels adaptively in a certain range.

  19. Channel processor in 2D cluster finding algorithm for high energy physics application

    International Nuclear Information System (INIS)

    Paul, Rourab; Chakrabarti, Amlan; Mitra, Jubin; Khan, Shuaib A.; Nayak, Tapan; Mukherjee, Sanjoy

    2016-01-01

    In a Large Ion Collider Experiment (ALICE) at CERN 1 TB/s (approximately) data comes from front end electronics. Previously, we had 1 GBT link operated with a cluster clock frequencies of 133 MHz and 320 MHz in Run 1 and Run 2 respectively. The cluster algorithm proposed in Run 1 and 2 could not work in Run 3 as the data speed increased almost 20 times. Older version cluster algorithm receives data sequentially as a stream. It has 2 main sub processes - Channel Processor, Merging process. The initial step of channel processor finds a peak Q max and sums up pads (sensors) data from -2 time bin to +2 time bin in the time direction. The computed value stores in a register named cluster fragment data (cfd o ). The merging process merges cfd o in pad direction. The data streams in Run 2 comes sequentially, which processed by the channel processor and merging block in a sequential manner with very less resource over head. In Run 3 data comes parallely, 1600 data from 1600 pads of a single time instant comes at each 200 ns interval (5 MHz) which is very challenging to process in the budgeted resource platform of Arria 10 FPGA hardware with 250 to 320 MHz cluster clock

  20. Clustering methods and visualization algorithms to aid nuclear reactor operative diagnostics

    International Nuclear Information System (INIS)

    Pepelyshev, Yu.N.; Dzwinel, W.

    1990-01-01

    The software system developed plays the role of the aid to an operator for nuclear reactor diagnostics. The noise analysis of the reactor parameters such as power, temperature and coolant flow rate constitutes the basis of the system. Combination of data acquisition, data preprocessing, clustering and cluster visualization algorithms with heuristic techniques of results analysis, determine the way of its implementation. Two regimes are available. The first one - extended - is recommended for a long term investigations and the second - suppressed for the aid to the reactor operation monitoring. The system has been tested and developed at the JINR IBR-2 pulsed reactor. 13 refs.; 4 figs.; 2 tabs

  1. K-mean clustering algorithm for processing signals from compound semiconductor detectors

    International Nuclear Information System (INIS)

    Tada, Tsutomu; Hitomi, Keitaro; Wu, Yan; Kim, Seong-Yun; Yamazaki, Hiromichi; Ishii, Keizo

    2011-01-01

    The K-mean clustering algorithm was employed for processing signal waveforms from TlBr detectors. The signal waveforms were classified based on its shape reflecting the charge collection process in the detector. The classified signal waveforms were processed individually to suppress the pulse height variation of signals due to the charge collection loss. The obtained energy resolution of a 137 Cs spectrum measured with a 0.5 mm thick TlBr detector was 1.3% FWHM by employing 500 clusters.

  2. Fast randomized Hough transformation track initiation algorithm based on multi-scale clustering

    Science.gov (United States)

    Wan, Minjie; Gu, Guohua; Chen, Qian; Qian, Weixian; Wang, Pengcheng

    2015-10-01

    A fast randomized Hough transformation track initiation algorithm based on multi-scale clustering is proposed to overcome existing problems in traditional infrared search and track system(IRST) which cannot provide movement information of the initial target and select the threshold value of correlation automatically by a two-dimensional track association algorithm based on bearing-only information . Movements of all the targets are presumed to be uniform rectilinear motion throughout this new algorithm. Concepts of space random sampling, parameter space dynamic linking table and convergent mapping of image to parameter space are developed on the basis of fast randomized Hough transformation. Considering the phenomenon of peak value clustering due to shortcomings of peak detection itself which is built on threshold value method, accuracy can only be ensured on condition that parameter space has an obvious peak value. A multi-scale idea is added to the above-mentioned algorithm. Firstly, a primary association is conducted to select several alternative tracks by a low-threshold .Then, alternative tracks are processed by multi-scale clustering methods , through which accurate numbers and parameters of tracks are figured out automatically by means of transforming scale parameters. The first three frames are processed by this algorithm in order to get the first three targets of the track , and then two slightly different gate radius are worked out , mean value of which is used to be the global threshold value of correlation. Moreover, a new model for curvilinear equation correction is applied to the above-mentioned track initiation algorithm for purpose of solving the problem of shape distortion when a space three-dimensional curve is mapped to a two-dimensional bearing-only space. Using sideways-flying, launch and landing as examples to build models and simulate, the application of the proposed approach in simulation proves its effectiveness , accuracy , and adaptivity

  3. What to Do When K-Means Clustering Fails: A Simple yet Principled Alternative Algorithm.

    Science.gov (United States)

    Raykov, Yordan P; Boukouvalas, Alexis; Baig, Fahd; Little, Max A

    The K-means algorithm is one of the most popular clustering algorithms in current use as it is relatively fast yet simple to understand and deploy in practice. Nevertheless, its use entails certain restrictive assumptions about the data, the negative consequences of which are not always immediately apparent, as we demonstrate. While more flexible algorithms have been developed, their widespread use has been hindered by their computational and technical complexity. Motivated by these considerations, we present a flexible alternative to K-means that relaxes most of the assumptions, whilst remaining almost as fast and simple. This novel algorithm which we call MAP-DP (maximum a-posteriori Dirichlet process mixtures), is statistically rigorous as it is based on nonparametric Bayesian Dirichlet process mixture modeling. This approach allows us to overcome most of the limitations imposed by K-means. The number of clusters K is estimated from the data instead of being fixed a-priori as in K-means. In addition, while K-means is restricted to continuous data, the MAP-DP framework can be applied to many kinds of data, for example, binary, count or ordinal data. Also, it can efficiently separate outliers from the data. This additional flexibility does not incur a significant computational overhead compared to K-means with MAP-DP convergence typically achieved in the order of seconds for many practical problems. Finally, in contrast to K-means, since the algorithm is based on an underlying statistical model, the MAP-DP framework can deal with missing data and enables model testing such as cross validation in a principled way. We demonstrate the simplicity and effectiveness of this algorithm on the health informatics problem of clinical sub-typing in a cluster of diseases known as parkinsonism.

  4. Enhancement of RWSN Lifetime via Firework Clustering Algorithm Validated by ANN

    Directory of Open Access Journals (Sweden)

    Ahmad Ali

    2018-03-01

    Full Text Available Nowadays, wireless power transfer is ubiquitously used in wireless rechargeable sensor networks (WSNs. Currently, the energy limitation is a grave concern issue for WSNs. However, lifetime enhancement of sensor networks is a challenging task need to be resolved. For addressing this issue, a wireless charging vehicle is an emerging technology to expand the overall network efficiency. The present study focuses on the enhancement of overall network lifetime of the rechargeable wireless sensor network. To resolve the issues mentioned above, we propose swarm intelligence based hard clustering approach using fireworks algorithm with the adaptive transfer function (FWA-ATF. In this work, the virtual clustering method has been applied in the routing process which utilizes the firework optimization algorithm. Still now, an FWA-ATF algorithm yet not applied by any researcher for RWSN. Furthermore, the validation study of the proposed method using the artificial neural network (ANN backpropagation algorithm incorporated in the present study. Different algorithms are applied to evaluate the performance of proposed technique that gives the best results in this mechanism. Numerical results indicate that our method outperforms existing methods and yield performance up to 80% regarding energy consumption and vacation time of wireless charging vehicle.

  5. CGTS: a site-clustering graph based tagSNP selection algorithm in genotype data.

    Science.gov (United States)

    Wang, Jun; Guo, Mao-zu; Wang, Chun-yu

    2009-01-30

    Recent studies have shown genetic variation is the basis of the genome-wide disease association research. However, due to the high cost on genotyping large number of single nucleotide polymorphisms (SNPs), it is essential to choose a small subset of informative SNPs (tagSNPs), which are able to capture most variation in a population, to represent the rest SNPs. Several methods have been proposed to find the minimum set of tagSNPs, but most of them still have some disadvantages such as information loss and block-partition limit. This paper proposes a new hybrid method named CGTS which combines the ideas of the clustering and the graph algorithms to select tagSNPs on genotype data. This method aims to maximize the number of the discarding nontagSNPs in the given set. CGTS integrates the information of the LD association and the genotype diversity using the site graphs, discards redundant SNPs using the algorithm based on these graph structures. The clustering algorithm is used to reduce the running time of CGTS. The efficiency of the algorithm and quality of solutions are evaluated on biological data and the comparisons with three popular selecting methods are shown in the paper. Our theoretical analysis and experimental results show that our algorithm CGTS is not only more efficient than other methods but also can be get higher accuracy in tagSNP selection.

  6. Hopfield-K-Means clustering algorithm: A proposal for the segmentation of electricity customers

    International Nuclear Information System (INIS)

    Lopez, Jose J.; Aguado, Jose A.; Martin, F.; Munoz, F.; Rodriguez, A.; Ruiz, Jose E.

    2011-01-01

    Customer classification aims at providing electric utilities with a volume of information to enable them to establish different types of tariffs. Several methods have been used to segment electricity customers, including, among others, the hierarchical clustering, Modified Follow the Leader and K-Means methods. These, however, entail problems with the pre-allocation of the number of clusters (Follow the Leader), randomness of the solution (K-Means) and improvement of the solution obtained (hierarchical algorithm). Another segmentation method used is Hopfield's autonomous recurrent neural network, although the solution obtained only guarantees that it is a local minimum. In this paper, we present the Hopfield-K-Means algorithm in order to overcome these limitations. This approach eliminates the randomness of the initial solution provided by K-Means based algorithms and it moves closer to the global optimun. The proposed algorithm is also compared against other customer segmentation and characterization techniques, on the basis of relative validation indexes. Finally, the results obtained by this algorithm with a set of 230 electricity customers (residential, industrial and administrative) are presented. (author)

  7. [Automatic Sleep Stage Classification Based on an Improved K-means Clustering Algorithm].

    Science.gov (United States)

    Xiao, Shuyuan; Wang, Bei; Zhang, Jian; Zhang, Qunfeng; Zou, Junzhong

    2016-10-01

    Sleep stage scoring is a hotspot in the field of medicine and neuroscience.Visual inspection of sleep is laborious and the results may be subjective to different clinicians.Automatic sleep stage classification algorithm can be used to reduce the manual workload.However,there are still limitations when it encounters complicated and changeable clinical cases.The purpose of this paper is to develop an automatic sleep staging algorithm based on the characteristics of actual sleep data.In the proposed improved K-means clustering algorithm,points were selected as the initial centers by using a concept of density to avoid the randomness of the original K-means algorithm.Meanwhile,the cluster centers were updated according to the‘Three-Sigma Rule’during the iteration to abate the influence of the outliers.The proposed method was tested and analyzed on the overnight sleep data of the healthy persons and patients with sleep disorders after continuous positive airway pressure(CPAP)treatment.The automatic sleep stage classification results were compared with the visual inspection by qualified clinicians and the averaged accuracy reached 76%.With the analysis of morphological diversity of sleep data,it was proved that the proposed improved K-means algorithm was feasible and valid for clinical practice.

  8. Bartender: a fast and accurate clustering algorithm to count barcode reads.

    Science.gov (United States)

    Zhao, Lu; Liu, Zhimin; Levy, Sasha F; Wu, Song

    2017-10-23

    Barcode sequencing (bar-seq) is a high-throughput, and cost effective method to assay large numbers of cell lineages or genotypes in complex cell pools. Because of its advantages, applications for bar-seq are quickly growing - from using neutral random barcodes to study the evolution of microbes or cancer, to using pseudo-barcodes, such as shRNAs or sgRNAs to simultaneously screen large numbers of cell perturbations. However, the computational pipelines for bar-seq clustering are not well developed. Available methods often yield a high frequency of under-clustering artifacts that result in spurious barcodes, or over-clustering artifacts that group distinct barcodes together. Here, we developed Bartender, an accurate clustering algorithm to detect barcodes and their abundances from raw next-generation sequencing data. In contrast with existing methods that cluster based on sequence similarity alone, Bartender uses a modified two-sample proportion test that also considers cluster size. This modification results in higher accuracy and lower rates of under- and over-clustering artifacts. Additionally, Bartender includes unique molecular identifier (UMI) handling and a "multiple time point" mode that matches barcode clusters between different clustering runs for seamless handling of time course data. Bartender is a set of simple-to-use command line tools that can be performed on a laptop at comparable run times to existing methods. Bartender is available at no charge for non-commercial use at https://github.com/LaoZZZZZ/bartender-1.1. song.wu@stonybrook.edu, sasha.levy@stonybrook.edu. Supplementary data are available at Bioinformatics online.

  9. An Automatic K-Means Clustering Algorithm of GPS Data Combining a Novel Niche Genetic Algorithm with Noise and Density

    Directory of Open Access Journals (Sweden)

    Xiangbing Zhou

    2017-12-01

    Full Text Available Rapidly growing Global Positioning System (GPS data plays an important role in trajectory and their applications (e.g., GPS-enabled smart devices. In order to employ K-means to mine the better origins and destinations (OD behind the GPS data and overcome its shortcomings including slowness of convergence, sensitivity to initial seeds selection, and getting stuck in a local optimum, this paper proposes and focuses on a novel niche genetic algorithm (NGA with density and noise for K-means clustering (NoiseClust. In NoiseClust, an improved noise method and K-means++ are proposed to produce the initial population and capture higher quality seeds that can automatically determine the proper number of clusters, and also handle the different sizes and shapes of genes. A density-based method is presented to divide the number of niches, with its aim to maintain population diversity. Adaptive probabilities of crossover and mutation are also employed to prevent the convergence to a local optimum. Finally, the centers (the best chromosome are obtained and then fed into the K-means as initial seeds to generate even higher quality clustering results by allowing the initial seeds to readjust as needed. Experimental results based on taxi GPS data sets demonstrate that NoiseClust has high performance and effectiveness, and easily mine the city’s situations in four taxi GPS data sets.

  10. A robust 3D mesh watermarking algorithm utilizing fuzzy C-Means clustering

    Directory of Open Access Journals (Sweden)

    Ola M. El Zein

    2017-12-01

    Full Text Available A new robust 3D watermarking algorithm utilizing Fuzzy C-Means (FCM clustering technique is presented. FCM clusters 3D mesh vertices into suitable and unsuitable choices to insert the watermark without occasioning visible deformation, and also it is tough for the attacker to determine places of the watermark insertion. Two watermarking processes are offered to insert the watermark into 3D mesh models. The first process utilizes topical statistical measurements like average and standard deviation in order to alter the values of vertices to secret watermark data into 3D mesh models, however, the second process utilizes a jumbled insertion planning to insert the watermark inside 3D mesh models utilizing the topical statistical measurements and altering 3D mesh vertices together. Simulation results show that the proposed algorithm is robust. The watermarked 3D mesh models are resistant to several attacks like similarity transforms, noise addition, cropping and mesh smoothing.

  11. Dynamic connectivity algorithms for Monte Carlo simulations of the random-cluster model

    Science.gov (United States)

    Metin Elçi, Eren; Weigel, Martin

    2014-05-01

    We review Sweeny's algorithm for Monte Carlo simulations of the random cluster model. Straightforward implementations suffer from the problem of computational critical slowing down, where the computational effort per edge operation scales with a power of the system size. By using a tailored dynamic connectivity algorithm we are able to perform all operations with a poly-logarithmic computational effort. This approach is shown to be efficient in keeping online connectivity information and is of use for a number of applications also beyond cluster-update simulations, for instance in monitoring droplet shape transitions. As the handling of the relevant data structures is non-trivial, we provide a Python module with a full implementation for future reference.

  12. Dynamic connectivity algorithms for Monte Carlo simulations of the random-cluster model

    International Nuclear Information System (INIS)

    Elçi, Eren Metin; Weigel, Martin

    2014-01-01

    We review Sweeny's algorithm for Monte Carlo simulations of the random cluster model. Straightforward implementations suffer from the problem of computational critical slowing down, where the computational effort per edge operation scales with a power of the system size. By using a tailored dynamic connectivity algorithm we are able to perform all operations with a poly-logarithmic computational effort. This approach is shown to be efficient in keeping online connectivity information and is of use for a number of applications also beyond cluster-update simulations, for instance in monitoring droplet shape transitions. As the handling of the relevant data structures is non-trivial, we provide a Python module with a full implementation for future reference.

  13. Application of a clustering-based peak alignment algorithm to analyze various DNA fingerprinting data.

    Science.gov (United States)

    Ishii, Satoshi; Kadota, Koji; Senoo, Keishi

    2009-09-01

    DNA fingerprinting analysis such as amplified ribosomal DNA restriction analysis (ARDRA), repetitive extragenic palindromic PCR (rep-PCR), ribosomal intergenic spacer analysis (RISA), and denaturing gradient gel electrophoresis (DGGE) are frequently used in various fields of microbiology. The major difficulty in DNA fingerprinting data analysis is the alignment of multiple peak sets. We report here an R program for a clustering-based peak alignment algorithm, and its application to analyze various DNA fingerprinting data, such as ARDRA, rep-PCR, RISA, and DGGE data. The results obtained by our clustering algorithm and by BioNumerics software showed high similarity. Since several R packages have been established to statistically analyze various biological data, the distance matrix obtained by our R program can be used for subsequent statistical analyses, some of which were not previously performed but are useful in DNA fingerprinting studies.

  14. A Tensor CP Decomposition Method for Clustering Heterogeneous Information Networks via Stochastic Gradient Descent Algorithms

    Directory of Open Access Journals (Sweden)

    Jibing Wu

    2017-01-01

    Full Text Available Clustering analysis is a basic and essential method for mining heterogeneous information networks, which consist of multiple types of objects and rich semantic relations among different object types. Heterogeneous information networks are ubiquitous in the real-world applications, such as bibliographic networks and social media networks. Unfortunately, most existing approaches, such as spectral clustering, are designed to analyze homogeneous information networks, which are composed of only one type of objects and links. Some recent studies focused on heterogeneous information networks and yielded some research fruits, such as RankClus and NetClus. However, they often assumed that the heterogeneous information networks usually follow some simple schemas, such as bityped network schema or star network schema. To overcome the above limitations, we model the heterogeneous information network as a tensor without the restriction of network schema. Then, a tensor CP decomposition method is adapted to formulate the clustering problem in heterogeneous information networks. Further, we develop two stochastic gradient descent algorithms, namely, SGDClus and SOSClus, which lead to effective clustering multityped objects simultaneously. The experimental results on both synthetic datasets and real-world dataset have demonstrated that our proposed clustering framework can model heterogeneous information networks efficiently and outperform state-of-the-art clustering methods.

  15. Optimal Machine Tools Selection Using Interval-Valued Data FCM Clustering Algorithm

    OpenAIRE

    Xin, Yupeng; Tian, Xitian; Huang, Lijiang

    2014-01-01

    Machine tool selection directly affects production rates, accuracy, and flexibility. In order to quickly and accurately select the appropriate machine tools in machining process planning, this paper proposes an optimal machine tools selection method based on interval-valued data fuzzy C-means (FCM) clustering algorithm. We define the machining capability meta (MAE) as the smallest unit to describe machining capacity of machine tools and establish MAE library based on the MAE information model...

  16. DESIGNING APPLICATION OF ANT COLONY SYSTEM ALGORITHM FOR THE SHORTEST ROUTE OF BANDA ACEH CITY AND ACEH BESAR REGENCY TOURISM BY USING GRAPHICAL USER INTERFACE MATLAB

    Directory of Open Access Journals (Sweden)

    Durisman Durisman

    2017-09-01

    Full Text Available Banda Aceh city and Aceh Besar Regency are two of the leading tourism areas located in the province of Aceh. For travelling, there are some important things to be considered, such as determining schedule and distance of tourism. Every tourist certainly chooses the shortest route to reach the destination since it can save time, energy, and money. The purpose of this reserach is to develop a method that can be used in calculating the shortest route and applied to the tourism of Banda Aceh city and Aceh Besar regency. In this reserach, Ant Colony Optimization algorithm is used to determine the shortest route to tourism of Banda Aceh city and Aceh Besar regency. From the analysis made by using both manual calculation and  GUI MATLAB program application test, the shortest route can be obtained with a minimum distance of 120.85 km in one travel. Based on the test result, the application for tourism (in Banda Aceh city and Aceh Besar regency shortest route searching built by utilizing the Ant Colony Optimization algorithm can find optimal route.  Keyword: tourism, the shortest route, Ant Colony Optimization

  17. Comments on "A robust fuzzy local information C-means clustering algorithm".

    Science.gov (United States)

    Celik, Turgay; Lee, Hwee Kuan

    2013-03-01

    In a recent paper, Krinidis and Chatzis proposed a variation of fuzzy c-means algorithm for image clustering. The local spatial and gray-level information are incorporated in a fuzzy way through an energy function. The local minimizers of the designed energy function to obtain the fuzzy membership of each pixel and cluster centers are proposed. In this paper, it is shown that the local minimizers of Krinidis and Chatzis to obtain the fuzzy membership and the cluster centers in an iterative manner are not exclusively solutions for true local minimizers of their designed energy function. Thus, the local minimizers of Krinidis and Chatzis do not converge to the correct local minima of the designed energy function not because of tackling to the local minima, but because of the design of energy function.

  18. Application of cloud computing in power routing for clusters of microgrids using oblivious network routing algorithm

    DEFF Research Database (Denmark)

    Amini, M. Hadi; Broojeni, Kianoosh G.; Dragicevic, Tomislav

    2017-01-01

    In this paper, we propose a comprehensive co-simulation platform for the clusters of microgrids. Our proposed real-time platform considers both physical and communication layers, which can be simulated via real-time digital power system simulator (RTDS) and OMNeT++. We also propose a novel...... of microgrid while preventing congestion as well as minimizing the power loss. Then, we present a two-layer simulation platform which considers both communication layer and physical layer of the microgrids' cluster. In order to improve the security of communication network, we perform the computations......, communication networks, and world-wide-web, is a metaheuristic solution to approximate network optimization problems under oblivious constraints utilizing advanced data structures and hypergraphs. Our oblivious power routing algorithms are also well suited for finding the optimal power flows through a cluster...

  19. Numerical linked-cluster algorithms. I. Spin systems on square, triangular, and kagomé lattices.

    Science.gov (United States)

    Rigol, Marcos; Bryant, Tyler; Singh, Rajiv R P

    2007-06-01

    We discuss recently introduced numerical linked-cluster (NLC) algorithms that allow one to obtain temperature-dependent properties of quantum lattice models, in the thermodynamic limit, from exact diagonalization of finite clusters. We present studies of thermodynamic observables for spin models on square, triangular, and kagomé lattices. Results for several choices of clusters and extrapolations methods, that accelerate the convergence of NLCs, are presented. We also include a comparison of NLC results with those obtained from exact analytical expressions (where available), high-temperature expansions (HTE), exact diagonalization (ED) of finite periodic systems, and quantum Monte Carlo simulations. For many models and properties NLC results are substantially more accurate than HTE and ED.

  20. Big Data GPU-Driven Parallel Processing Spatial and Spatio-Temporal Clustering Algorithms

    Science.gov (United States)

    Konstantaras, Antonios; Skounakis, Emmanouil; Kilty, James-Alexander; Frantzeskakis, Theofanis; Maravelakis, Emmanuel

    2016-04-01

    Advances in graphics processing units' technology towards encompassing parallel architectures [1], comprised of thousands of cores and multiples of parallel threads, provide the foundation in terms of hardware for the rapid processing of various parallel applications regarding seismic big data analysis. Seismic data are normally stored as collections of vectors in massive matrices, growing rapidly in size as wider areas are covered, denser recording networks are being established and decades of data are being compiled together [2]. Yet, many processes regarding seismic data analysis are performed on each seismic event independently or as distinct tiles [3] of specific grouped seismic events within a much larger data set. Such processes, independent of one another can be performed in parallel narrowing down processing times drastically [1,3]. This research work presents the development and implementation of three parallel processing algorithms using Cuda C [4] for the investigation of potentially distinct seismic regions [5,6] present in the vicinity of the southern Hellenic seismic arc. The algorithms, programmed and executed in parallel comparatively, are the: fuzzy k-means clustering with expert knowledge [7] in assigning overall clusters' number; density-based clustering [8]; and a selves-developed spatio-temporal clustering algorithm encompassing expert [9] and empirical knowledge [10] for the specific area under investigation. Indexing terms: GPU parallel programming, Cuda C, heterogeneous processing, distinct seismic regions, parallel clustering algorithms, spatio-temporal clustering References [1] Kirk, D. and Hwu, W.: 'Programming massively parallel processors - A hands-on approach', 2nd Edition, Morgan Kaufman Publisher, 2013 [2] Konstantaras, A., Valianatos, F., Varley, M.R. and Makris, J.P.: 'Soft-Computing Modelling of Seismicity in the Southern Hellenic Arc', Geoscience and Remote Sensing Letters, vol. 5 (3), pp. 323-327, 2008 [3] Papadakis, S. and

  1. Segmentation of dermatoscopic images by frequency domain filtering and k-means clustering algorithms.

    Science.gov (United States)

    Rajab, Maher I

    2011-11-01

    Since the introduction of epiluminescence microscopy (ELM), image analysis tools have been extended to the field of dermatology, in an attempt to algorithmically reproduce clinical evaluation. Accurate image segmentation of skin lesions is one of the key steps for useful, early and non-invasive diagnosis of coetaneous melanomas. This paper proposes two image segmentation algorithms based on frequency domain processing and k-means clustering/fuzzy k-means clustering. The two methods are capable of segmenting and extracting the true border that reveals the global structure irregularity (indentations and protrusions), which may suggest excessive cell growth or regression of a melanoma. As a pre-processing step, Fourier low-pass filtering is applied to reduce the surrounding noise in a skin lesion image. A quantitative comparison of the techniques is enabled by the use of synthetic skin lesion images that model lesions covered with hair to which Gaussian noise is added. The proposed techniques are also compared with an established optimal-based thresholding skin-segmentation method. It is demonstrated that for lesions with a range of different border irregularity properties, the k-means clustering and fuzzy k-means clustering segmentation methods provide the best performance over a range of signal to noise ratios. The proposed segmentation techniques are also demonstrated to have similar performance when tested on real skin lesions representing high-resolution ELM images. This study suggests that the segmentation results obtained using a combination of low-pass frequency filtering and k-means or fuzzy k-means clustering are superior to the result that would be obtained by using k-means or fuzzy k-means clustering segmentation methods alone. © 2011 John Wiley & Sons A/S.

  2. Adaptive multimodal continuous ant colony optimization

    OpenAIRE

    Yang, Qiang; Chen, Wei-Neng; Yu, Zhengtao; Gu, Tianlong; Li, Yun; Zhang, Huaxiang; Zhang, Jun

    2017-01-01

    Seeking multiple optima simultaneously, which multimodal optimization aims at, has attracted increasing attention but remains challenging. Taking advantage of ant colony optimization algorithms in preserving high diversity, this paper intends to extend ant colony optimization algorithms to deal with multimodal optimization. First, combined with current niching methods, an adaptive multimodal continuous ant colony optimization algorithm is introduced. In this algorithm, an adaptive parameter a...

  3. Implementation of hybrid clustering based on partitioning around medoids algorithm and divisive analysis on human Papillomavirus DNA

    Science.gov (United States)

    Arimbi, Mentari Dian; Bustamam, Alhadi; Lestari, Dian

    2017-03-01

    Data clustering can be executed through partition or hierarchical method for many types of data including DNA sequences. Both clustering methods can be combined by processing partition algorithm in the first level and hierarchical in the second level, called hybrid clustering. In the partition phase some popular methods such as PAM, K-means, or Fuzzy c-means methods could be applied. In this study we selected partitioning around medoids (PAM) in our partition stage. Furthermore, following the partition algorithm, in hierarchical stage we applied divisive analysis algorithm (DIANA) in order to have more specific clusters and sub clusters structures. The number of main clusters is determined using Davies Bouldin Index (DBI) value. We choose the optimal number of clusters if the results minimize the DBI value. In this work, we conduct the clustering on 1252 HPV DNA sequences data from GenBank. The characteristic extraction is initially performed, followed by normalizing and genetic distance calculation using Euclidean distance. In our implementation, we used the hybrid PAM and DIANA using the R open source programming tool. In our results, we obtained 3 main clusters with average DBI value is 0.979, using PAM in the first stage. After executing DIANA in the second stage, we obtained 4 sub clusters for Cluster-1, 9 sub clusters for Cluster-2 and 2 sub clusters in Cluster-3, with the BDI value 0.972, 0.771, and 0.768 for each main cluster respectively. Since the second stage produce lower DBI value compare to the DBI value in the first stage, we conclude that this hybrid approach can improve the accuracy of our clustering results.

  4. A Spectrum Sensing Method Based on Signal Feature and Clustering Algorithm in Cognitive Wireless Multimedia Sensor Networks

    Directory of Open Access Journals (Sweden)

    Yongwei Zhang

    2017-01-01

    Full Text Available In order to solve the problem of difficulty in determining the threshold in spectrum sensing technologies based on the random matrix theory, a spectrum sensing method based on clustering algorithm and signal feature is proposed for Cognitive Wireless Multimedia Sensor Networks. Firstly, the wireless communication signal features are obtained according to the sampling signal covariance matrix. Then, the clustering algorithm is used to classify and test the signal features. Different signal features and clustering algorithms are compared in this paper. The experimental results show that the proposed method has better sensing performance.

  5. A Smartphone Indoor Localization Algorithm Based on WLAN Location Fingerprinting with Feature Extraction and Clustering

    Directory of Open Access Journals (Sweden)

    Junhai Luo

    2017-06-01

    Full Text Available With the development of communication technology, the demand for location-based services is growing rapidly. This paper presents an algorithm for indoor localization based on Received Signal Strength (RSS, which is collected from Access Points (APs. The proposed localization algorithm contains the offline information acquisition phase and online positioning phase. Firstly, the AP selection algorithm is reviewed and improved based on the stability of signals to remove useless AP; secondly, Kernel Principal Component Analysis (KPCA is analyzed and used to remove the data redundancy and maintain useful characteristics for nonlinear feature extraction; thirdly, the Affinity Propagation Clustering (APC algorithm utilizes RSS values to classify data samples and narrow the positioning range. In the online positioning phase, the classified data will be matched with the testing data to determine the position area, and the Maximum Likelihood (ML estimate will be employed for precise positioning. Eventually, the proposed algorithm is implemented in a real-world environment for performance evaluation. Experimental results demonstrate that the proposed algorithm improves the accuracy and computational complexity.

  6. Parallel OSEM Reconstruction Algorithm for Fully 3-D SPECT on a Beowulf Cluster.

    Science.gov (United States)

    Rong, Zhou; Tianyu, Ma; Yongjie, Jin

    2005-01-01

    In order to improve the computation speed of ordered subset expectation maximization (OSEM) algorithm for fully 3-D single photon emission computed tomography (SPECT) reconstruction, an experimental beowulf-type cluster was built and several parallel reconstruction schemes were described. We implemented a single-program-multiple-data (SPMD) parallel 3-D OSEM reconstruction algorithm based on message passing interface (MPI) and tested it with combinations of different number of calculating processors and different size of voxel grid in reconstruction (64×64×64 and 128×128×128). Performance of parallelization was evaluated in terms of the speedup factor and parallel efficiency. This parallel implementation methodology is expected to be helpful to make fully 3-D OSEM algorithms more feasible in clinical SPECT studies.

  7. Hybrid Pareto artificial bee colony algorithm for multi-objective single machine group scheduling problem with sequence-dependent setup times and learning effects.

    Science.gov (United States)

    Yue, Lei; Guan, Zailin; Saif, Ullah; Zhang, Fei; Wang, Hao

    2016-01-01

    Group scheduling is significant for efficient and cost effective production system. However, there exist setup times between the groups, which require to decrease it by sequencing groups in an efficient way. Current research is focused on a sequence dependent group scheduling problem with an aim to minimize the makespan in addition to minimize the total weighted tardiness simultaneously. In most of the production scheduling problems, the processing time of jobs is assumed as fixed. However, the actual processing time of jobs may be reduced due to "learning effect". The integration of sequence dependent group scheduling problem with learning effects has been rarely considered in literature. Therefore, current research considers a single machine group scheduling problem with sequence dependent setup times and learning effects simultaneously. A novel hybrid Pareto artificial bee colony algorithm (HPABC) with some steps of genetic algorithm is proposed for current problem to get Pareto solutions. Furthermore, five different sizes of test problems (small, small medium, medium, large medium, large) are tested using proposed HPABC. Taguchi method is used to tune the effective parameters of the proposed HPABC for each problem category. The performance of HPABC is compared with three famous multi objective optimization algorithms, improved strength Pareto evolutionary algorithm (SPEA2), non-dominated sorting genetic algorithm II (NSGAII) and particle swarm optimization algorithm (PSO). Results indicate that HPABC outperforms SPEA2, NSGAII and PSO and gives better Pareto optimal solutions in terms of diversity and quality for almost all the instances of the different sizes of problems.

  8. A comparison of genetic algorithm and artificial bee colony approaches in solving blocking hybrid flowshop scheduling problem with sequence dependent setup/changeover times

    Directory of Open Access Journals (Sweden)

    Pongpan Nakkaew

    2016-06-01

    Full Text Available In manufacturing process where efficiency is crucial in order to remain competitive, flowshop is a common configuration in which machines are arranged in series and products are produced through the stages one by one. In certain production processes, the machines are frequently configured in the way that each production stage may contain multiple processing units in parallel or hybrid. Moreover, along with precedent conditions, the sequence dependent setup times may exist. Finally, in case there is no buffer, a machine is said to be blocked if the next stage to handle its output is being occupied. Such NP-Hard problem, referred as Blocking Hybrid Flowshop Scheduling Problem with Sequence Dependent Setup/Changeover Times, is usually not possible to find the best exact solution to satisfy optimization objectives such as minimization of the overall production time. Thus, it is usually solved by approximate algorithms such as metaheuristics. In this paper, we investigate comparatively the effectiveness of the two approaches: a Genetic Algorithm (GA and an Artificial Bee Colony (ABC algorithm. GA is inspired by the process of natural selection. ABC, in the same manner, resembles the way types of bees perform specific functions and work collectively to find their foods by means of division of labor. Additionally, we apply an algorithm to improve the GA and ABC algorithms so that they can take advantage of parallel processing resources of modern multiple core processors while eliminate the need for screening the optimal parameters of both algorithms in advance.

  9. Study on 2D random medium inversion algorithm based on Fuzzy C-means Clustering theory

    Science.gov (United States)

    Xu, Z.; Zhu, P.; Gu, Y.; Yang, X.; Jiang, J.

    2015-12-01

    Abstract: In seismic exploration for metal deposits, the traditional seismic inversion method based on layered homogeneous medium theory seems difficult to inverse small scale inhomogeneity and spatial variation of the actual medium. The reason is that physical properties of actual medium are more likely random distribution rather than layered. Thus, it is necessary to investigate a random medium inversion algorithm. The velocity of 2D random medium can be described as a function of five parameters: the background velocity (V0), the standard deviation of velocity (σ), the horizontal and vertical autocorrelation lengths (A and B), and the autocorrelation angle (θ). In this study, we propose an inversion algorithm for random medium based on the Fuzzy C-means Clustering (FCM) theory, whose basic idea is that FCM is used to control the inversion process to move forward to the direction we desired by clustering the estimated parameters into groups. Our method can be divided into three steps: firstly, the three parameters (A, B, θ) are estimated from 2D post-stack seismic data using the non-stationary random medium parameter estimation method, and then the estimated parameters are clustered to different groups according to FCM; secondly, the initial random medium model is constructed with clustered groups and the rest two parameters (V0 and σ) obtained from the well logging data; at last, inversion of the random medium are conducted to obtain velocity, impedance and random medium parameters using the Conjugate Gradient Method. The inversion experiments of synthetic seismic data show that the velocity models inverted by our algorithm are close to the real velocity distribution and the boundary of different media can be distinguished clearly.Key words: random medium, inversion, FCM, parameter estimation

  10. Urban Growth Modeling Using Cellular Automata with Multi-Temporal Remote Sensing Images Calibrated by the Artificial Bee Colony Optimization Algorithm

    Science.gov (United States)

    Naghibi, Fereydoun; Delavar, Mahmoud Reza; Pijanowski, Bryan

    2016-01-01

    Cellular Automata (CA) is one of the most common techniques used to simulate the urbanization process. CA-based urban models use transition rules to deliver spatial patterns of urban growth and urban dynamics over time. Determining the optimum transition rules of the CA is a critical step because of the heterogeneity and nonlinearities existing among urban growth driving forces. Recently, new CA models integrated with optimization methods based on swarm intelligence algorithms were proposed to overcome this drawback. The Artificial Bee Colony (ABC) algorithm is an advanced meta-heuristic swarm intelligence-based algorithm. Here, we propose a novel CA-based urban change model that uses the ABC algorithm to extract optimum transition rules. We applied the proposed ABC-CA model to simulate future urban growth in Urmia (Iran) with multi-temporal Landsat images from 1997, 2006 and 2015. Validation of the simulation results was made through statistical methods such as overall accuracy, the figure of merit and total operating characteristics (TOC). Additionally, we calibrated the CA model by ant colony optimization (ACO) to assess the performance of our proposed model versus similar swarm intelligence algorithm methods. We showed that the overall accuracy and the figure of merit of the ABC-CA model are 90.1% and 51.7%, which are 2.9% and 8.8% higher than those of the ACO-CA model, respectively. Moreover, the allocation disagreement of the simulation results for the ABC-CA model is 9.9%, which is 2.9% less than that of the ACO-CA model. Finally, the ABC-CA model also outperforms the ACO-CA model with fewer quantity and allocation errors and slightly more hits. PMID:27983633

  11. Ratios of colony mass to thermal conductance of tree and man-made nest enclosures of Apis mellifera: implications for survival, clustering, humidity regulation and Varroa destructor

    Science.gov (United States)

    Mitchell, Derek

    2016-05-01

    In the absence of human intervention, the honeybee ( Apis mellifera L.) usually constructs its nest in a tree within a tall, narrow, thick-walled cavity high above the ground (the enclosure); however, most research and apiculture is conducted in the thin-walled, squat wooden enclosures we know as hives. This experimental research, using various hives and thermal models of trees, has found that the heat transfer rate is approximately four to seven times greater in the hives in common use, compared to a typical tree enclosure in winter configuration. This gives a ratio of colony mass to lumped enclosure thermal conductance (MCR) of less than 0.8 kgW-1 K for wooden hives and greater than 5 kgW-1 K for tree enclosures. This result for tree enclosures implies higher levels of humidity in the nest, increased survival of smaller colonies and lower Varroa destructor breeding success. Many honeybee behaviours previously thought to be intrinsic may only be a coping mechanism for human intervention; for example, at an MCR of above 2 kgW-1 K, clustering in a tree enclosure may be an optional, rare, heat conservation behaviour for established colonies, rather than the compulsory, frequent, life-saving behaviour that is in the hives in common use. The implied improved survival in hives with thermal properties of tree nests may help to solve some of the problems honeybees are currently facing in apiculture.

  12. An Efficient MapReduce-Based Parallel Clustering Algorithm for Distributed Traffic Subarea Division

    Directory of Open Access Journals (Sweden)

    Dawen Xia

    2015-01-01

    Full Text Available Traffic subarea division is vital for traffic system management and traffic network analysis in intelligent transportation systems (ITSs. Since existing methods may not be suitable for big traffic data processing, this paper presents a MapReduce-based Parallel Three-Phase K-Means (Par3PKM algorithm for solving traffic subarea division problem on a widely adopted Hadoop distributed computing platform. Specifically, we first modify the distance metric and initialization strategy of K-Means and then employ a MapReduce paradigm to redesign the optimized K-Means algorithm for parallel clustering of large-scale taxi trajectories. Moreover, we propose a boundary identifying method to connect the borders of clustering results for each cluster. Finally, we divide traffic subarea of Beijing based on real-world trajectory data sets generated by 12,000 taxis in a period of one month using the proposed approach. Experimental evaluation results indicate that when compared with K-Means, Par2PK-Means, and ParCLARA, Par3PKM achieves higher efficiency, more accuracy, and better scalability and can effectively divide traffic subarea with big taxi trajectory data.

  13. Rotating Machinery Fault Diagnosis for Imbalanced Data Based on Fast Clustering Algorithm and Support Vector Machine

    Directory of Open Access Journals (Sweden)

    Xiaochen Zhang

    2017-01-01

    Full Text Available To diagnose rotating machinery fault for imbalanced data, a method based on fast clustering algorithm (FCA and support vector machine (SVM was proposed. Combined with variational mode decomposition (VMD and principal component analysis (PCA, sensitive features of the rotating machinery fault were obtained and constituted the imbalanced fault sample set. Next, a fast clustering algorithm was adopted to reduce the number of the majority data from the imbalanced fault sample set. Consequently, the balanced fault sample set consisted of the clustered data and the minority data from the imbalanced fault sample set. After that, SVM was trained with the balanced fault sample set and tested with the imbalanced fault sample set so the fault diagnosis model of the rotating machinery could be obtained. Finally, the gearbox fault data set and the rolling bearing fault data set were adopted to test the fault diagnosis model. The experimental results showed that the fault diagnosis model could effectively diagnose the rotating machinery fault for imbalanced data.

  14. Clustering of tethered satellite system simulation data by an adaptive neuro-fuzzy algorithm

    Science.gov (United States)

    Mitra, Sunanda; Pemmaraju, Surya

    1992-01-01

    Recent developments in neuro-fuzzy systems indicate that the concepts of adaptive pattern recognition, when used to identify appropriate control actions corresponding to clusters of patterns representing system states in dynamic nonlinear control systems, may result in innovative designs. A modular, unsupervised neural network architecture, in which fuzzy learning rules have been embedded is used for on-line identification of similar states. The architecture and control rules involved in Adaptive Fuzzy Leader Clustering (AFLC) allow this system to be incorporated in control systems for identification of system states corresponding to specific control actions. We have used this algorithm to cluster the simulation data of Tethered Satellite System (TSS) to estimate the range of delta voltages necessary to maintain the desired length rate of the tether. The AFLC algorithm is capable of on-line estimation of the appropriate control voltages from the corresponding length error and length rate error without a priori knowledge of their membership functions and familarity with the behavior of the Tethered Satellite System.

  15. Detection and clustering of features in aerial images by neuron network-based algorithm

    Science.gov (United States)

    Vozenilek, Vit

    2015-12-01

    The paper presents the algorithm for detection and clustering of feature in aerial photographs based on artificial neural networks. The presented approach is not focused on the detection of specific topographic features, but on the combination of general features analysis and their use for clustering and backward projection of clusters to aerial image. The basis of the algorithm is a calculation of the total error of the network and a change of weights of the network to minimize the error. A classic bipolar sigmoid was used for the activation function of the neurons and the basic method of backpropagation was used for learning. To verify that a set of features is able to represent the image content from the user's perspective, the web application was compiled (ASP.NET on the Microsoft .NET platform). The main achievements include the knowledge that man-made objects in aerial images can be successfully identified by detection of shapes and anomalies. It was also found that the appropriate combination of comprehensive features that describe the colors and selected shapes of individual areas can be useful for image analysis.

  16. A Hybrid Method for Image Segmentation Based on Artificial Fish Swarm Algorithm and Fuzzy c-Means Clustering.

    Science.gov (United States)

    Ma, Li; Li, Yang; Fan, Suohai; Fan, Runzhu

    2015-01-01

    Image segmentation plays an important role in medical image processing. Fuzzy c-means (FCM) clustering is one of the popular clustering algorithms for medical image segmentation. However, FCM has the problems of depending on initial clustering centers, falling into local optimal solution easily, and sensitivity to noise disturbance. To solve these problems, this paper proposes a hybrid artificial fish swarm algorithm (HAFSA). The proposed algorithm combines artificial fish swarm algorithm (AFSA) with FCM whose advantages of global optimization searching and parallel computing ability of AFSA are utilized to find a superior result. Meanwhile, Metropolis criterion and noise reduction mechanism are introduced to AFSA for enhancing the convergence rate and antinoise ability. The artificial grid graph and Magnetic Resonance Imaging (MRI) are used in the experiments, and the experimental results show that the proposed algorithm has stronger antinoise ability and higher precision. A number of evaluation indicators also demonstrate that the effect of HAFSA is more excellent than FCM and suppressed FCM (SFCM).

  17. Nontrivial nonequilibrium critical relaxation in cluster algorithms and universal nonequilibrium-to-equilibrium scaling procedure

    Science.gov (United States)

    Nonomura, Yoshihiko; Tomita, Yusuke

    2015-03-01

    Recently we have found that the nonequilibrium relaxation from the perfectly-ordered state of the 2D and 3D Ising models in cluster algorithms shows nontrivial stretched-exponential decay at the transition temperature. Similar nontrivial nonequilibrium critical relaxation is also observed in the 2D XY, 3D XY and 3D Heisenberg models; simple exponential decay in these cases. In order to confirm these behaviors and evaluate the scaling form precisely and robustly, we have proposed a universal scaling procedure to connect nonequilibrium and equilibrium behaviors continuously. For example, when the critical relaxation of the average magnetization of a system with linear size L is observed in local-update algorithms, this quantity decays in a power law in the early-stage relaxation with ~t - β / (zν) and converges to the critical magnetization mc (L) ~L - β / ν in equilibrium. Then, when L β / ν is plotted versus tL-z , data for various system sizes are scaled on a single curve in the whole parameter region. This procedure also holds for the cases with cluster algorithms.

  18. The Cascaded Enhanced k-Means and Fuzzy c-Means Clustering Algorithms for Automated Segmentation of Malaria Parasites

    Directory of Open Access Journals (Sweden)

    Abdul Nasir Aimi Salihah

    2018-01-01

    Full Text Available Malaria continues to be one of the leading causes of death in the world, despite the massive efforts put forth by World Health Organization (WHO in eradicating it, worldwide. Efficient control and proper treatment of this disease requires early detection and accurate diagnosis due to the large number of cases reported yearly. To achieve this aim, this paper proposes a malaria parasite segmentation approach via cascaded clustering algorithms to automate the malaria diagnosis process. The comparisons among the cascaded clustering algorithms have been made by considering the accuracy, sensitivity and specificity of the segmented malaria images. Based on the qualitative and quantitative findings, the results show that by using the final centres that have been generated by enhanced k-means (EKM clustering as the initial centres for fuzzy c-means (FCM clustering, has led to the production of good segmented malaria image. The proposed cascaded EKM and FCM clustering has successfully segmented 100 malaria images of Plasmodium Vivax species with average segmentation accuracy, sensitivity and specificity values of 99.22%, 88.84% and 99.56%, respectively. Therefore, the EKM algorithm has given the best performance compared to k-means (KM and moving k-means (MKM algorithms when all the three clustering algorithms are cascaded with FCM algorithm.

  19. Identification of gene knockout strategies using a hybrid of an ant colony optimization algorithm and flux balance analysis to optimize microbial strains.

    Science.gov (United States)

    Lu, Shi Jing; Salleh, Abdul Hakim Mohamed; Mohamad, Mohd Saberi; Deris, Safaai; Omatu, Sigeru; Yoshioka, Michifumi

    2014-09-28

    Reconstructions of genome-scale metabolic networks from different organisms have become popular in recent years. Metabolic engineering can simulate the reconstruction process to obtain desirable phenotypes. In previous studies, optimization algorithms have been implemented to identify the near-optimal sets of knockout genes for improving metabolite production. However, previous works contained premature convergence and the stop criteria were not clear for each case. Therefore, this study proposes an algorithm that is a hybrid of the ant colony optimization algorithm and flux balance analysis (ACOFBA) to predict near optimal sets of gene knockouts in an effort to maximize growth rates and the production of certain metabolites. Here, we present a case study that uses Baker's yeast, also known as Saccharomyces cerevisiae, as the model organism and target the rate of vanillin production for optimization. The results of this study are the growth rate of the model organism after gene deletion and a list of knockout genes. The ACOFBA algorithm was found to improve the yield of vanillin in terms of growth rate and production compared with the previous algorithms. Copyright © 2014 Elsevier Ltd. All rights reserved.

  20. Evaluating patterns of a white-band disease (WBD outbreak in Acropora palmata using spatial analysis: a comparison of transect and colony clustering.

    Directory of Open Access Journals (Sweden)

    Jennifer A Lentz

    Full Text Available BACKGROUND: Despite being one of the first documented, there is little known of the causative agent or environmental stressors that promote white-band disease (WBD, a major disease of Caribbean Acropora palmata. Likewise, there is little known about the spatiality of outbreaks. We examined the spatial patterns of WBD during a 2004 outbreak at Buck Island Reef National Monument in the US Virgin Islands. METHODOLOGY/PRINCIPAL FINDINGS: Ripley's K statistic was used to measure spatial dependence of WBD across scales. Localized clusters of WBD were identified using the DMAP spatial filtering technique. Statistics were calculated for colony- (number of A. palmata colonies with and without WBD within each transect and transect-level (presence/absence of WBD within transects data to evaluate differences in spatial patterns at each resolution of coral sampling. The Ripley's K plots suggest WBD does cluster within the study area, and approached statistical significance (p = 0.1 at spatial scales of 1100 m or less. Comparisons of DMAP results suggest the transect-level overestimated the prevalence and spatial extent of the outbreak. In contrast, more realistic prevalence estimates and spatial patterns were found by weighting each transect by the number of individual A. palmata colonies with and without WBD. CONCLUSIONS: As the search for causation continues, surveillance and proper documentation of the spatial patterns may inform etiology, and at the same time assist reef managers in allocating resources to tracking the disease. Our results indicate that the spatial scale of data collected can drastically affect the calculation of prevalence and spatial distribution of WBD outbreaks. Specifically, we illustrate that higher resolution sampling resulted in more realistic disease estimates. This should assist in selecting appropriate sampling designs for future outbreak investigations. The spatial techniques used here can be used to facilitate other

  1. Evaluating patterns of a white-band disease (WBD) outbreak in Acropora palmata using spatial analysis: a comparison of transect and colony clustering.

    Science.gov (United States)

    Lentz, Jennifer A; Blackburn, Jason K; Curtis, Andrew J

    2011-01-01

    Despite being one of the first documented, there is little known of the causative agent or environmental stressors that promote white-band disease (WBD), a major disease of Caribbean Acropora palmata. Likewise, there is little known about the spatiality of outbreaks. We examined the spatial patterns of WBD during a 2004 outbreak at Buck Island Reef National Monument in the US Virgin Islands. Ripley's K statistic was used to measure spatial dependence of WBD across scales. Localized clusters of WBD were identified using the DMAP spatial filtering technique. Statistics were calculated for colony- (number of A. palmata colonies with and without WBD within each transect) and transect-level (presence/absence of WBD within transects) data to evaluate differences in spatial patterns at each resolution of coral sampling. The Ripley's K plots suggest WBD does cluster within the study area, and approached statistical significance (p = 0.1) at spatial scales of 1100 m or less. Comparisons of DMAP results suggest the transect-level overestimated the prevalence and spatial extent of the outbreak. In contrast, more realistic prevalence estimates and spatial patterns were found by weighting each transect by the number of individual A. palmata colonies with and without WBD. As the search for causation continues, surveillance and proper documentation of the spatial patterns may inform etiology, and at the same time assist reef managers in allocating resources to tracking the disease. Our results indicate that the spatial scale of data collected can drastically affect the calculation of prevalence and spatial distribution of WBD outbreaks. Specifically, we illustrate that higher resolution sampling resulted in more realistic disease estimates. This should assist in selecting appropriate sampling designs for future outbreak investigations. The spatial techniques used here can be used to facilitate other coral disease studies, as well as, improve reef conservation and management.

  2. Clustering Educational Digital Library Usage Data: A Comparison of Latent Class Analysis and K-Means Algorithms

    Science.gov (United States)

    Xu, Beijie; Recker, Mimi; Qi, Xiaojun; Flann, Nicholas; Ye, Lei

    2013-01-01

    This article examines clustering as an educational data mining method. In particular, two clustering algorithms, the widely used K-means and the model-based Latent Class Analysis, are compared, using usage data from an educational digital library service, the Instructional Architect (IA.usu.edu). Using a multi-faceted approach and multiple data…

  3. HYBRIDIZATION OF MODIFIED ANT COLONY OPTIMIZATION AND INTELLIGENT WATER DROPS ALGORITHM FOR JOB SCHEDULING IN COMPUTATIONAL GRID

    Directory of Open Access Journals (Sweden)

    P. Mathiyalagan

    2013-10-01

    Full Text Available As grid is a heterogeneous environment, finding an optimal schedule for the job is always a complex task. In this paper, a hybridization technique using intelligent water drops and Ant colony optimization which are nature-inspired swarm intelligence approaches are used to find the best resource for the job. Intelligent water drops involves in finding out all matching resources for the job requirements and the routing information (optimal path to reach those resources. Ant Colony optimization chooses the best resource among all matching resources for the job. The objective of this approach is to converge to the optimal schedule faster, minimize the make span of the job, improve load balancing of resources and efficient utilization of available resources.

  4. Clustering Multiple Sclerosis Subgroups with Multifractal Methods and Self-Organizing Map Algorithm

    Science.gov (United States)

    Karaca, Yeliz; Cattani, Carlo

    Magnetic resonance imaging (MRI) is the most sensitive method to detect chronic nervous system diseases such as multiple sclerosis (MS). In this paper, Brownian motion Hölder regularity functions (polynomial, periodic (sine), exponential) for 2D image, such as multifractal methods were applied to MR brain images, aiming to easily identify distressed regions, in MS patients. With these regions, we have proposed an MS classification based on the multifractal method by using the Self-Organizing Map (SOM) algorithm. Thus, we obtained a cluster analysis by identifying pixels from distressed regions in MR images through multifractal methods and by diagnosing subgroups of MS patients through artificial neural networks.

  5. Implementation of Automatic Clustering Algorithm and Fuzzy Time Series in Motorcycle Sales Forecasting

    Science.gov (United States)

    Rasim; Junaeti, E.; Wirantika, R.

    2018-01-01

    Accurate forecasting for the sale of a product depends on the forecasting method used. The purpose of this research is to build motorcycle sales forecasting application using Fuzzy Time Series method combined with interval determination using automatic clustering algorithm. Forecasting is done using the sales data of motorcycle sales in the last ten years. Then the error rate of forecasting is measured using Means Percentage Error (MPE) and Means Absolute Percentage Error (MAPE). The results of forecasting in the one-year period obtained in this study are included in good accuracy.

  6. Application of Fuzzy C-Means Clustering Algorithm Based on Particle Swarm Optimization in Computer Forensics

    Science.gov (United States)

    Wang, Deguang; Han, Baochang; Huang, Ming

    Computer forensics is the technology of applying computer technology to access, investigate and analysis the evidence of computer crime. It mainly include the process of determine and obtain digital evidence, analyze and take data, file and submit result. And the data analysis is the key link of computer forensics. As the complexity of real data and the characteristics of fuzzy, evidence analysis has been difficult to obtain the desired results. This paper applies fuzzy c-means clustering algorithm based on particle swarm optimization (FCMP) in computer forensics, and it can be more satisfactory results.

  7. Genetic algorithm with fuzzy clustering for optimization of nuclear reactor problems

    International Nuclear Information System (INIS)

    Machado, Marcelo Dornellas; Sacco, Wagner Figueiredo; Schirru, Roberto

    2000-01-01

    Genetic Algorithms (GAs) are biologically motivated adaptive systems which have been used, with good results, in function optimization. However, traditional GAs rapidly push an artificial population toward convergence. That is, all individuals in the population soon become nearly identical. Niching Methods allow genetic algorithms to maintain a population of diverse individuals. GAs that incorporate these methods are capable of locating multiple, optimal solutions within a single population. The purpose of this study is to introduce a new niching technique based on the fuzzy clustering method FCM, bearing in mind its eventual application in nuclear reactor related problems, specially the nuclear reactor core reload one, which has multiple solutions. tests are performed using widely known test functions and their results show that the new method is quite promising, specially to a future application in real world problems like the nuclear reactor core reload. (author)

  8. Multispectral image classification of MRI data using an empirically-derived clustering algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Horn, K.M.; Osbourn, G.C.; Bouchard, A.M. [Sandia National Labs., Albuquerque, NM (United States); Sanders, J.A. [Univ. of New Mexico, Albuquerque, NM (United States)]|[VA Hospital, Albuquerque, NM (United States)

    1998-08-01

    Multispectral image analysis of magnetic resonance imaging (MRI) data has been performed using an empirically-derived clustering algorithm. This algorithm groups image pixels into distinct classes which exhibit similar response in the T{sub 2} 1st and 2nd-echo, and T{sub 1} (with ad without gadolinium) MRI images. The grouping is performed in an n-dimensional mathematical space; the n-dimensional volumes bounding each class define each specific tissue type. The classification results are rendered again in real-space by colored-coding each grouped class of pixels (associated with differing tissue types). This classification method is especially well suited for class volumes with complex boundary shapes, and is also expected to robustly detect abnormal tissue classes. The classification process is demonstrated using a three dimensional data set of MRI scans of a human brain tumor.

  9. Optimal Machine Tools Selection Using Interval-Valued Data FCM Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    Yupeng Xin

    2014-01-01

    Full Text Available Machine tool selection directly affects production rates, accuracy, and flexibility. In order to quickly and accurately select the appropriate machine tools in machining process planning, this paper proposes an optimal machine tools selection method based on interval-valued data fuzzy C-means (FCM clustering algorithm. We define the machining capability meta (MAE as the smallest unit to describe machining capacity of machine tools and establish MAE library based on the MAE information model. According to the manufacturing process requirements, the MAEs can be queried from MAE library. Subsequently, interval-valued data FCM algorithm is used to select the appropriate machine tools for manufacturing process. Through computing matching degree between manufacturing process machining constraints and MAEs, we get the most appropriate MAEs and the corresponding machine tools. Finally, a case study of an exhaust duct part of the aeroengine is presented to demonstrate the applicability of the proposed method.

  10. Performance Analysis of Combined Methods of Genetic Algorithm and K-Means Clustering in Determining the Value of Centroid

    Science.gov (United States)

    Adya Zizwan, Putra; Zarlis, Muhammad; Budhiarti Nababan, Erna

    2017-12-01

    The determination of Centroid on K-Means Algorithm directly affects the quality of the clustering results. Determination of centroid by using random numbers has many weaknesses. The GenClust algorithm that combines the use of Genetic Algorithms and K-Means uses a genetic algorithm to determine the centroid of each cluster. The use of the GenClust algorithm uses 50% chromosomes obtained through deterministic calculations and 50% is obtained from the generation of random numbers. This study will modify the use of the GenClust algorithm in which the chromosomes used are 100% obtained through deterministic calculations. The results of this study resulted in performance comparisons expressed in Mean Square Error influenced by centroid determination on K-Means method by using GenClust method, modified GenClust method and also classic K-Means.

  11. Optimal Parameter Selection for Support Vector Machine Based on Artificial Bee Colony Algorithm: A Case Study of Grid-Connected PV System Power Prediction

    Directory of Open Access Journals (Sweden)

    Xiang-ming Gao

    2017-01-01

    Full Text Available Predicting the output power of photovoltaic system with nonstationarity and randomness, an output power prediction model for grid-connected PV systems is proposed based on empirical mode decomposition (EMD and support vector machine (SVM optimized with an artificial bee colony (ABC algorithm. First, according to the weather forecast data sets on the prediction date, the time series data of output power on a similar day with 15-minute intervals are built. Second, the time series data of the output power are decomposed into a series of components, including some intrinsic mode components IMFn and a trend component Res, at different scales using EMD. The corresponding SVM prediction model is established for each IMF component and trend component, and the SVM model parameters are optimized with the artificial bee colony algorithm. Finally, the prediction results of each model are reconstructed, and the predicted values of the output power of the grid-connected PV system can be obtained. The prediction model is tested with actual data, and the results show that the power prediction model based on the EMD and ABC-SVM has a faster calculation speed and higher prediction accuracy than do the single SVM prediction model and the EMD-SVM prediction model without optimization.

  12. Automated spike sorting algorithm based on Laplacian eigenmaps and k-means clustering.

    Science.gov (United States)

    Chah, E; Hok, V; Della-Chiesa, A; Miller, J J H; O'Mara, S M; Reilly, R B

    2011-02-01

    This study presents a new automatic spike sorting method based on feature extraction by Laplacian eigenmaps combined with k-means clustering. The performance of the proposed method was compared against previously reported algorithms such as principal component analysis (PCA) and amplitude-based feature extraction. Two types of classifier (namely k-means and classification expectation-maximization) were incorporated within the spike sorting algorithms, in order to find a suitable classifier for the feature sets. Simulated data sets and in-vivo tetrode multichannel recordings were employed to assess the performance of the spike sorting algorithms. The results show that the proposed algorithm yields significantly improved performance with mean sorting accuracy of 73% and sorting error of 10% compared to PCA which combined with k-means had a sorting accuracy of 58% and sorting error of 10%.A correction was made to this article on 22 February 2011. The spacing of the title was amended on the abstract page. No changes were made to the article PDF and the print version was unaffected.

  13. Using Hierarchical Time Series Clustering Algorithm and Wavelet Classifier for Biometric Voice Classification

    Directory of Open Access Journals (Sweden)

    Simon Fong

    2012-01-01

    Full Text Available Voice biometrics has a long history in biosecurity applications such as verification and identification based on characteristics of the human voice. The other application called voice classification which has its important role in grouping unlabelled voice samples, however, has not been widely studied in research. Lately voice classification is found useful in phone monitoring, classifying speakers’ gender, ethnicity and emotion states, and so forth. In this paper, a collection of computational algorithms are proposed to support voice classification; the algorithms are a combination of hierarchical clustering, dynamic time wrap transform, discrete wavelet transform, and decision tree. The proposed algorithms are relatively more transparent and interpretable than the existing ones, though many techniques such as Artificial Neural Networks, Support Vector Machine, and Hidden Markov Model (which inherently function like a black box have been applied for voice verification and voice identification. Two datasets, one that is generated synthetically and the other one empirically collected from past voice recognition experiment, are used to verify and demonstrate the effectiveness of our proposed voice classification algorithm.

  14. An Energy-Efficient Spectrum-Aware Reinforcement Learning-Based Clustering Algorithm for Cognitive Radio Sensor Networks.

    Science.gov (United States)

    Mustapha, Ibrahim; Mohd Ali, Borhanuddin; Rasid, Mohd Fadlee A; Sali, Aduwati; Mohamad, Hafizal

    2015-08-13

    It is well-known that clustering partitions network into logical groups of nodes in order to achieve energy efficiency and to enhance dynamic channel access in cognitive radio through cooperative sensing. While the topic of energy efficiency has been well investigated in conventional wireless sensor networks, the latter has not been extensively explored. In this paper, we propose a reinforcement learning-based spectrum-aware clustering algorithm that allows a member node to learn the energy and cooperative sensing costs for neighboring clusters to achieve an optimal solution. Each member node selects an optimal cluster that satisfies pairwise constraints, minimizes network energy consumption and enhances channel sensing performance through an exploration technique. We first model the network energy consumption and then determine the optimal number of clusters for the network. The problem of selecting an optimal cluster is formulated as a Markov Decision Process (MDP) in the algorithm and the obtained simulation results show convergence, learning and adaptability of the algorithm to dynamic environment towards achieving an optimal solution. Performance comparisons of our algorithm with the Groupwise Spectrum Aware (GWSA)-based algorithm in terms of Sum of Square Error (SSE), complexity, network energy consumption and probability of detection indicate improved performance from the proposed approach. The results further reveal that an energy savings of 9% and a significant Primary User (PU) detection improvement can be achieved with the proposed approach.

  15. A Novel Energy-Aware Distributed Clustering Algorithm for Heterogeneous Wireless Sensor Networks in the Mobile Environment

    Directory of Open Access Journals (Sweden)

    Ying Gao

    2015-12-01

    Full Text Available In order to prolong the network lifetime, energy-efficient protocols adapted to the features of wireless sensor networks should be used. This paper explores in depth the nature of heterogeneous wireless sensor networks, and finally proposes an algorithm to address the problem of finding an effective pathway for heterogeneous clustering energy. The proposed algorithm implements cluster head selection according to the degree of energy attenuation during the network’s running and the degree of candidate nodes’ effective coverage on the whole network, so as to obtain an even energy consumption over the whole network for the situation with high degree of coverage. Simulation results show that the proposed clustering protocol has better adaptability to heterogeneous environments than existing clustering algorithms in prolonging the network lifetime.

  16. Optimizing Energy Consumption in Vehicular Sensor Networks by Clustering Using Fuzzy C-Means and Fuzzy Subtractive Algorithms

    Science.gov (United States)

    Ebrahimi, A.; Pahlavani, P.; Masoumi, Z.

    2017-09-01

    Traffic monitoring and managing in urban intelligent transportation systems (ITS) can be carried out based on vehicular sensor networks. In a vehicular sensor network, vehicles equipped with sensors such as GPS, can act as mobile sensors for sensing the urban traffic and sending the reports to a traffic monitoring center (TMC) for traffic estimation. The energy consumption by the sensor nodes is a main problem in the wireless sensor networks (WSNs); moreover, it is the most important feature in designing these networks. Clustering the sensor nodes is considered as an effective solution to reduce the energy consumption of WSNs. Each cluster should have a Cluster Head (CH), and a number of nodes located within its supervision area. The cluster heads are responsible for gathering and aggregating the information of clusters. Then, it transmits the information to the data collection center. Hence, the use of clustering decreases the volume of transmitting information, and, consequently, reduces the energy consumption of network. In this paper, Fuzzy C-Means (FCM) and Fuzzy Subtractive algorithms are employed to cluster sensors and investigate their performance on the energy consumption of sensors. It can be seen that the FCM algorithm and Fuzzy Subtractive have been reduced energy consumption of vehicle sensors up to 90.68% and 92.18%, respectively. Comparing the performance of the algorithms implies the 1.5 percent improvement in Fuzzy Subtractive algorithm in comparison.

  17. OPTIMIZING ENERGY CONSUMPTION IN VEHICULAR SENSOR NETWORKS BY CLUSTERING USING FUZZY C-MEANS AND FUZZY SUBTRACTIVE ALGORITHMS

    Directory of Open Access Journals (Sweden)

    A. Ebrahimi

    2017-09-01

    Full Text Available Traffic monitoring and managing in urban intelligent transportation systems (ITS can be carried out based on vehicular sensor networks. In a vehicular sensor network, vehicles equipped with sensors such as GPS, can act as mobile sensors for sensing the urban traffic and sending the reports to a traffic monitoring center (TMC for traffic estimation. The energy consumption by the sensor nodes is a main problem in the wireless sensor networks (WSNs; moreover, it is the most important feature in designing these networks. Clustering the sensor nodes is considered as an effective solution to reduce the energy consumption of WSNs. Each cluster should have a Cluster Head (CH, and a number of nodes located within its supervision area. The cluster heads are responsible for gathering and aggregating the information of clusters. Then, it transmits the information to the data collection center. Hence, the use of clustering decreases the volume of transmitting information, and, consequently, reduces the energy consumption of network. In this paper, Fuzzy C-Means (FCM and Fuzzy Subtractive algorithms are employed to cluster sensors and investigate their performance on the energy consumption of sensors. It can be seen that the FCM algorithm and Fuzzy Subtractive have been reduced energy consumption of vehicle sensors up to 90.68% and 92.18%, respectively. Comparing the performance of the algorithms implies the 1.5 percent improvement in Fuzzy Subtractive algorithm in comparison.

  18. A Knowledge-Informed and Pareto-Based Artificial Bee Colony Optimization Algorithm for Multi-Objective Land-Use Allocation

    Directory of Open Access Journals (Sweden)

    Lina Yang

    2018-02-01

    Full Text Available Land-use allocation is of great significance in urban development. This type of allocation is usually considered to be a complex multi-objective spatial optimization problem, whose optimized result is a set of Pareto-optimal solutions (Pareto front reflecting different tradeoffs in several objectives. However, obtaining a Pareto front is a challenging task, and the Pareto front obtained by state-of-the-art algorithms is still not sufficient. To achieve better Pareto solutions, taking the grid-representative land-use allocation problem with two objectives as an example, an artificial bee colony optimization algorithm for multi-objective land-use allocation (ABC-MOLA is proposed. In this algorithm, the traditional ABC’s search direction guiding scheme and solution maintaining process are modified. In addition, a knowledge-informed neighborhood search strategy, which utilizes the auxiliary knowledge of natural geography and spatial structures to facilitate the neighborhood spatial search around each solution, is developed to further improve the Pareto front’s quality. A series of comparison experiments (a simulated experiment with small data volume and a real-world data experiment for a large area shows that all the Pareto fronts obtained by ABC-MOLA totally dominate the Pareto fronts by other algorithms, which demonstrates ABC-MOLA’s effectiveness in achieving Pareto fronts of high quality.

  19. KANTS: a stigmergic ant algorithm for cluster analysis and swarm art.

    Science.gov (United States)

    Fernandes, Carlos M; Mora, Antonio M; Merelo, Juan J; Rosa, Agostinho C

    2014-06-01

    KANTS is a swarm intelligence clustering algorithm inspired by the behavior of social insects. It uses stigmergy as a strategy for clustering large datasets and, as a result, displays a typical behavior of complex systems: self-organization and global patterns emerging from the local interaction of simple units. This paper introduces a simplified version of KANTS and describes recent experiments with the algorithm in the context of a contemporary artistic and scientific trend called swarm art, a type of generative art in which swarm intelligence systems are used to create artwork or ornamental objects. KANTS is used here for generating color drawings from the input data that represent real-world phenomena, such as electroencephalogram sleep data. However, the main proposal of this paper is an art project based on well-known abstract paintings, from which the chromatic values are extracted and used as input. Colors and shapes are therefore reorganized by KANTS, which generates its own interpretation of the original artworks. The project won the 2012 Evolutionary Art, Design, and Creativity Competition.

  20. Are judgments a form of data clustering? Reexamining contrast effects with the k-means algorithm.

    Science.gov (United States)

    Boillaud, Eric; Molina, Guylaine

    2015-04-01

    A number of theories have been proposed to explain in precise mathematical terms how statistical parameters and sequential properties of stimulus distributions affect category ratings. Various contextual factors such as the mean, the midrange, and the median of the stimuli; the stimulus range; the percentile rank of each stimulus; and the order of appearance have been assumed to influence judgmental contrast. A data clustering reinterpretation of judgmental relativity is offered wherein the influence of the initial choice of centroids on judgmental contrast involves 2 combined frequency and consistency tendencies. Accounts of the k-means algorithm are provided, showing good agreement with effects observed on multiple distribution shapes and with a variety of interaction effects relating to the number of stimuli, the number of response categories, and the method of skewing. Experiment 1 demonstrates that centroid initialization accounts for contrast effects obtained with stretched distributions. Experiment 2 demonstrates that the iterative convergence inherent to the k-means algorithm accounts for the contrast reduction observed across repeated blocks of trials. The concept of within-cluster variance minimization is discussed, as is the applicability of a backward k-means calculation method for inferring, from empirical data, the values of the centroids that would serve as a representation of the judgmental context. (c) 2015 APA, all rights reserved.

  1. A Novel Method to Predict Genomic Islands Based on Mean Shift Clustering Algorithm

    Science.gov (United States)

    de Brito, Daniel M.; Maracaja-Coutinho, Vinicius; de Farias, Savio T.; Batista, Leonardo V.; do Rêgo, Thaís G.

    2016-01-01

    Genomic Islands (GIs) are regions of bacterial genomes that are acquired from other organisms by the phenomenon of horizontal transfer. These regions are often responsible for many important acquired adaptations of the bacteria, with great impact on their evolution and behavior. Nevertheless, these adaptations are usually associated with pathogenicity, antibiotic resistance, degradation and metabolism. Identification of such regions is of medical and industrial interest. For this reason, different approaches for genomic islands prediction have been proposed. However, none of them are capable of predicting precisely the complete repertory of GIs in a genome. The difficulties arise due to the changes in performance of different algorithms in the face of the variety of nucleotide distribution in different species. In this paper, we present a novel method to predict GIs that is built upon mean shift clustering algorithm. It does not require any information regarding the number of clusters, and the bandwidth parameter is automatically calculated based on a heuristic approach. The method was implemented in a new user-friendly tool named MSGIP—Mean Shift Genomic Island Predictor. Genomes of bacteria with GIs discussed in other papers were used to evaluate the proposed method. The application of this tool revealed the same GIs predicted by other methods and also different novel unpredicted islands. A detailed investigation of the different features related to typical GI elements inserted in these new regions confirmed its effectiveness. Stand-alone and user-friendly versions for this new methodology are available at http://msgip.integrativebioinformatics.me. PMID:26731657

  2. A Novel Method to Predict Genomic Islands Based on Mean Shift Clustering Algorithm.

    Directory of Open Access Journals (Sweden)

    Daniel M de Brito

    Full Text Available Genomic Islands (GIs are regions of bacterial genomes that are acquired from other organisms by the phenomenon of horizontal transfer. These regions are often responsible for many important acquired adaptations of the bacteria, with great impact on their evolution and behavior. Nevertheless, these adaptations are usually associated with pathogenicity, antibiotic resistance, degradation and metabolism. Identification of such regions is of medical and industrial interest. For this reason, different approaches for genomic islands prediction have been proposed. However, none of them are capable of predicting precisely the complete repertory of GIs in a genome. The difficulties arise due to the changes in performance of different algorithms in the face of the variety of nucleotide distribution in different species. In this paper, we present a novel method to predict GIs that is built upon mean shift clustering algorithm. It does not require any information regarding the number of clusters, and the bandwidth parameter is automatically calculated based on a heuristic approach. The method was implemented in a new user-friendly tool named MSGIP--Mean Shift Genomic Island Predictor. Genomes of bacteria with GIs discussed in other papers were used to evaluate the proposed method. The application of this tool revealed the same GIs predicted by other methods and also different novel unpredicted islands. A detailed investigation of the different features related to typical GI elements inserted in these new regions confirmed its effectiveness. Stand-alone and user-friendly versions for this new methodology are available at http://msgip.integrativebioinformatics.me.

  3. A Hybrid Spectral Clustering and Deep Neural Network Ensemble Algorithm for Intrusion Detection in Sensor Networks

    Directory of Open Access Journals (Sweden)

    Tao Ma

    2016-10-01

    Full Text Available The development of intrusion detection systems (IDS that are adapted to allow routers and network defence systems to detect malicious network traffic disguised as network protocols or normal access is a critical challenge. This paper proposes a novel approach called SCDNN, which combines spectral clustering (SC and deep neural network (DNN algorithms. First, the dataset is divided into k subsets based on sample similarity using cluster centres, as in SC. Next, the distance between data points in a testing set and the training set is measured based on similarity features and is fed into the deep neural network algorithm for intrusion detection. Six KDD-Cup99 and NSL-KDD datasets and a sensor network dataset were employed to test the performance of the model. These experimental results indicate that the SCDNN classifier not only performs better than backpropagation neural network (BPNN, support vector machine (SVM, random forest (RF and Bayes tree models in detection accuracy and the types of abnormal attacks found. It also provides an effective tool of study and analysis of intrusion detection in large networks.

  4. Consumers' Kansei Needs Clustering Method for Product Emotional Design Based on Numerical Design Structure Matrix and Genetic Algorithms.

    Science.gov (United States)

    Yang, Yan-Pu; Chen, Deng-Kai; Gu, Rong; Gu, Yu-Feng; Yu, Sui-Huai

    2016-01-01

    Consumers' Kansei needs reflect their perception about a product and always consist of a large number of adjectives. Reducing the dimension complexity of these needs to extract primary words not only enables the target product to be explicitly positioned, but also provides a convenient design basis for designers engaging in design work. Accordingly, this study employs a numerical design structure matrix (NDSM) by parameterizing a conventional DSM and integrating genetic algorithms to find optimum Kansei clusters. A four-point scale method is applied to assign link weights of every two Kansei adjectives as values of cells when constructing an NDSM. Genetic algorithms are used to cluster the Kansei NDSM and find optimum clusters. Furthermore, the process of the proposed method is presented. The details of the proposed approach are illustrated using an example of electronic scooter for Kansei needs clustering. The case study reveals that the proposed method is promising for clustering Kansei needs adjectives in product emotional design.

  5. KABOOM! A new suffix array based algorithm for clustering expression data.

    Science.gov (United States)

    Hazelhurst, Scott; Lipták, Zsuzsanna

    2011-12-15

    Second-generation sequencing technology has reinvigorated research using expression data, and clustering such data remains a significant challenge, with much larger datasets and with different error profiles. Algorithms that rely on all-versus-all comparison of sequences are not practical for large datasets. We introduce a new filter for string similarity which has the potential to eliminate the need for all-versus-all comparison in clustering of expression data and other similar tasks. Our filter is based on multiple long exact matches between the two strings, with the additional constraint that these matches must be sufficiently far apart. We give details of its efficient implementation using modified suffix arrays. We demonstrate its efficiency by presenting our new expression clustering tool, wcd-express, which uses this heuristic. We compare it to other current tools and show that it is very competitive both with respect to quality and run time. Source code and binaries available under GPL at http://code.google.com/p/wcdest. Runs on Linux and MacOS X. scott.hazelhurst@wits.ac.za; zsuzsa@cebitec.uni-bielefeld.de Supplementary data are available at Bioinformatics online.

  6. 2D evaluation of spectral LIBS data derived from heterogeneous materials using cluster algorithm

    Science.gov (United States)

    Gottlieb, C.; Millar, S.; Grothe, S.; Wilsch, G.

    2017-08-01

    Laser-induced Breakdown Spectroscopy (LIBS) is capable of providing spatially resolved element maps in regard to the chemical composition of the sample. The evaluation of heterogeneous materials is often a challenging task, especially in the case of phase boundaries. In order to determine information about a certain phase of a material, the need for a method that offers an objective evaluation is necessary. This paper will introduce a cluster algorithm in the case of heterogeneous building materials (concrete) to separate the spectral information of non-relevant aggregates and cement matrix. In civil engineering, the information about the quantitative ingress of harmful species like Cl-, Na+ and SO42- is of great interest in the evaluation of the remaining lifetime of structures (Millar et al., 2015; Wilsch et al., 2005). These species trigger different damage processes such as the alkali-silica reaction (ASR) or the chloride-induced corrosion of the reinforcement. Therefore, a discrimination between the different phases, mainly cement matrix and aggregates, is highly important (Weritz et al., 2006). For the 2D evaluation, the expectation-maximization-algorithm (EM algorithm; Ester and Sander, 2000) has been tested for the application presented in this work. The method has been introduced and different figures of merit have been presented according to recommendations given in Haddad et al. (2014). Advantages of this method will be highlighted. After phase separation, non-relevant information can be excluded and only the wanted phase displayed. Using a set of samples with known and unknown composition, the EM-clustering method has been validated regarding to Gustavo González and Ángeles Herrador (2007).

  7. Clustering-based energy-saving algorithm in ultra-dense network

    Science.gov (United States)

    Huang, Junwei; Zhou, Pengguang; Teng, Deyang; Zhang, Renchi; Xu, Hao

    2017-06-01

    In Ultra-dense Networks (UDN), dense deployment of low power small base stations will cause serious small cells interference and a large amount of energy consumption. The purpose of this paper is to explore the method of reducing small cells interference and energy saving system in UDN, and we innovatively propose a sleep-waking-active (SWA) scheme. The scheme decreases the user outage causing by failure to detect users’ service requests, shortens the opening time of active base stations directly switching to sleep mode; we further proposes a Vertex Surrounding Clustering(VSC) algorithm, which first colours the small cells with the most strongest interference and next extends to the adjacent small cells. VSC algorithm can use the least colour to stain the small cell, reduce the number of iterations and promote the efficiency of colouring. The simulation results show that SWA scheme can effectively improve the system Energy Efficiency (EE), the VSC algorithm can reduce the small cells interference and optimize the users’ Spectrum Efficiency (SE) and throughput.

  8. Extended Traffic Crash Modelling through Precision and Response Time Using Fuzzy Clustering Algorithms Compared with Multi-layer Perceptron

    Directory of Open Access Journals (Sweden)

    Iman Aghayan

    2012-11-01

    Full Text Available This paper compares two fuzzy clustering algorithms – fuzzy subtractive clustering and fuzzy C-means clustering – to a multi-layer perceptron neural network for their ability to predict the severity of crash injuries and to estimate the response time on the traffic crash data. Four clustering algorithms – hierarchical, K-means, subtractive clustering, and fuzzy C-means clustering – were used to obtain the optimum number of clusters based on the mean silhouette coefficient and R-value before applying the fuzzy clustering algorithms. The best-fit algorithms were selected according to two criteria: precision (root mean square, R-value, mean absolute errors, and sum of square error and response time (t. The highest R-value was obtained for the multi-layer perceptron (0.89, demonstrating that the multi-layer perceptron had a high precision in traffic crash prediction among the prediction models, and that it was stable even in the presence of outliers and overlapping data. Meanwhile, in comparison with other prediction models, fuzzy subtractive clustering provided the lowest value for response time (0.284 second, 9.28 times faster than the time of multi-layer perceptron, meaning that it could lead to developing an on-line system for processing data from detectors and/or a real-time traffic database. The model can be extended through improvements based on additional data through induction procedure.

  9. Applying Ant Colony Algorithm and Neural Network Model to Color Deviation Defect Detection in Liquid Crystal Displays

    Directory of Open Access Journals (Sweden)

    Hong-Dar Lin

    2005-06-01

    Full Text Available Thin Film Transistor Liquid Crystal Display (TFT-LCD has excellent properties such as lower voltage to start and less occupied space if comparing with traditional Cathode-Ray Tube (CRT. But screen flaw points and display color deviation defects on image display exist in TFT-LCD products. This research proposes a new automated visual inspection method to solve the problems. We first use multivariate Hotelling T2 statistic for integrating coordinates of color models to construct a T2 energy diagram for inspecting defects and controlling patterns in TFT-LCD display images. An Ant Colony based approach that integrates computer vision techniques is developed to detect the flaw point defects. Then, Back Propagation Network (BPN model is proposed to inspect small deviation defects of the LCD display colors. Experimental results show the proposed system can provide good effects and practicality.

  10. An Ant Colony Optimization algorithm for solving the fixed destination multi-depot multiple traveling salesman problem with non-random parameters

    Science.gov (United States)

    Ramadhani, T.; Hertono, G. F.; Handari, B. D.

    2017-07-01

    The Multiple Traveling Salesman Problem (MTSP) is the extension of the Traveling Salesman Problem (TSP) in which the shortest routes of m salesmen all of which start and finish in a single city (depot) will be determined. If there is more than one depot and salesmen start from and return to the same depot, then the problem is called Fixed Destination Multi-depot Multiple Traveling Salesman Problem (MMTSP). In this paper, MMTSP will be solved using the Ant Colony Optimization (ACO) algorithm. ACO is a metaheuristic optimization algorithm which is derived from the behavior of ants in finding the shortest route(s) from the anthill to a form of nourishment. In solving the MMTSP, the algorithm is observed with respect to different chosen cities as depots and non-randomly three parameters of MMTSP: m, K, L, those represents the number of salesmen, the fewest cities that must be visited by a salesman, and the most number of cities that can be visited by a salesman, respectively. The implementation is observed with four dataset from TSPLIB. The results show that the different chosen cities as depots and the three parameters of MMTSP, in which m is the most important parameter, affect the solution.

  11. Informational and Linguistic Analysis of Large Genomic Sequence Collections via Efficient Hadoop Cluster Algorithms.

    Science.gov (United States)

    Ferraro Petrillo, Umberto; Roscigno, Gianluca; Cattaneo, Giuseppe; Giancarlo, Raffaele

    2018-01-12

    Information theoretic and compositional/linguistic analysis of genomes have a central role in bioinformatics, even more so since the associated methodologies are becoming very valuable also for epigenomic and meta-genomic studies. The kernel of those methods is based on the collection of k-mer statistics, i.e., how many times each k-mer in {A;C; G; T}k occurs in a DNA sequence. Although this problem is computationally very simple and efficiently solvable on a conventional computer, the sheer amount of data available now in applications demands to resort to parallel and distributed computing. Indeed, those type of algorithms have been developed to collect k-mer statistics in the realm of genome assembly. However, they are so specialized to this domain that they do not extend easily to the computation of informational and linguistic indices, concurrently on sets of genomes. Following the well established approach in many disciplines, and with a growing success also in bioinformatics, to resort to MapReduce and Hadoop to deal with "Big Data" problems, we present KCH, the first set of MapReduce algorithms able to perform concurrently informational and linguistic analysis of large collections of genomic sequences on a Hadoop cluster. The benchmarking of KCH that we provide indicates that it is quite effective and versatile. It is also competitive with respect to the parallel and distributed algorithms highly specialized to k-mer statistics collection for genome assembly problems. In conclusion, KCH is a much needed addition to the growing number of algorithms and tools that use MapReduce for bioinformatics core applications. The software, including instructions for running it over Amazon AWS, as well as the datasets are available at http://www.di-srv.unisa.it/KCH. umberto.ferraro@uniroma1.it. Supplementary data are available at Bioinformatics online. © The Author (2018). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com

  12. A particle swarm optimization algorithm with random learning mechanism and Levy flight for optimization of atomic clusters

    Science.gov (United States)

    Yan, Bailu; Zhao, Zheng; Zhou, Yingcheng; Yuan, Wenyan; Li, Jian; Wu, Jun; Cheng, Daojian

    2017-10-01

    Swarm intelligence optimization algorithms are mainstream algorithms for solving complex optimization problems. Among these algorithms, the particle swarm optimization (PSO) algorithm has the advantages of fast computation speed and few parameters. However, PSO is prone to premature convergence. To solve this problem, we develop a new PSO algorithm (RPSOLF) by combining the characteristics of random learning mechanism and Levy flight. The RPSOLF algorithm increases the diversity of the population by learning from random particles and random walks in Levy flight. On the one hand, we carry out a large number of numerical experiments on benchmark test functions, and compare these results with the PSO algorithm with Levy flight (PSOLF) algorithm and other PSO variants in previous reports. The results show that the optimal solution can be found faster and more efficiently by the RPSOLF algorithm. On the other hand, the RPSOLF algorithm can also be applied to optimize the Lennard-Jones clusters, and the results indicate that the algorithm obtains the optimal structure (2-60 atoms) with an extraordinary high efficiency. In summary, RPSOLF algorithm proposed in our paper is proved to be an extremely effective tool for global optimization.

  13. Semi-supervised spectral algorithms for community detection in complex networks based on equivalence of clustering methods

    Science.gov (United States)

    Ma, Xiaoke; Wang, Bingbo; Yu, Liang

    2018-01-01

    Community detection is fundamental for revealing the structure-functionality relationship in complex networks, which involves two issues-the quantitative function for community as well as algorithms to discover communities. Despite significant research on either of them, few attempt has been made to establish the connection between the two issues. To attack this problem, a generalized quantification function is proposed for community in weighted networks, which provides a framework that unifies several well-known measures. Then, we prove that the trace optimization of the proposed measure is equivalent with the objective functions of algorithms such as nonnegative matrix factorization, kernel K-means as well as spectral clustering. It serves as the theoretical foundation for designing algorithms for community detection. On the second issue, a semi-supervised spectral clustering algorithm is developed by exploring the equivalence relation via combining the nonnegative matrix factorization and spectral clustering. Different from the traditional semi-supervised algorithms, the partial supervision is integrated into the objective of the spectral algorithm. Finally, through extensive experiments on both artificial and real world networks, we demonstrate that the proposed method improves the accuracy of the traditional spectral algorithms in community detection.

  14. Modeling for the Calcination Process of Industry Rotary Kiln Using ANFIS Coupled with a Novel Hybrid Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    Yongchang Cai

    2017-01-01

    Full Text Available Rotary kiln is important equipment in heavy industries and its calcination process is the key impact to the product quality. Due to the difficulty in obtaining the accurate algebraic model of the calcination process, an intelligent modeling method based on ANFIS and clustering algorithms is studied. In the model, ANFIS is employed as the core structure, and aiming to improve both its performance in reduced computation and accuracy, a novel hybrid clustering algorithm is proposed by combining FCM and Subtractive methods. A quasi-random data set is then hired to test the new hybrid clustering algorithm and results indicate its superiority to FCM and Subtractive methods. Further, a set of data from the successful control activity of sophisticated workers in manufacturing field is used to train the model, and the model demonstrates its advantages in both fast convergence and more accuracy approaching.

  15. Evaluation of the application of BIM technology based on PCA - Q Clustering Algorithm and Choquet Integral

    Directory of Open Access Journals (Sweden)

    Wei Xiaozhao

    2016-03-01

    Full Text Available For the development of the construction industry, the construction of data era is approaching, BIM (building information model with the actual needs of the construction industry has been widely used as a building information clan system software, different software for the practical application of different maturity, through the expert scoring method for the application of BIM technology maturity index mark, establish the evaluation index system, using PCA - Q clustering algorithm for the evaluation index system of classification, comprehensive evaluation in combination with the Choquet integral on the classification of evaluation index system, to achieve a reasonable assessment of the application of BIM technology maturity index. To lay a foundation for the future development of BIM Technology in various fields of construction, at the same time provides direction for the comprehensive application of BIM technology.

  16. Evaluation of Modified Categorical Data Fuzzy Clustering Algorithm on the Wisconsin Breast Cancer Dataset

    Directory of Open Access Journals (Sweden)

    Amir Ahmad

    2016-01-01

    Full Text Available The early diagnosis of breast cancer is an important step in a fight against the disease. Machine learning techniques have shown promise in improving our understanding of the disease. As medical datasets consist of data points which cannot be precisely assigned to a class, fuzzy methods have been useful for studying of these datasets. Sometimes breast cancer datasets are described by categorical features. Many fuzzy clustering algorithms have been developed for categorical datasets. However, in most of these methods Hamming distance is used to define the distance between the two categorical feature values. In this paper, we use a probabilistic distance measure for the distance computation among a pair of categorical feature values. Experiments demonstrate that the distance measure performs better than Hamming distance for Wisconsin breast cancer data.

  17. Load Weight Classification of The Quayside Container Crane Based On K-Means Clustering Algorithm

    Science.gov (United States)

    Zhang, Bingqian; Hu, Xiong; Tang, Gang; Wang, Yide

    2017-07-01

    The precise knowledge of the load weight of each operation of the quayside container crane is important for accurately assessing the service life of the crane. The load weight is directly related to the vibration intensity. Through the study on the vibration of the hoist motor of the crane in radial and axial directions, we can classify the load using K-means clustering algorithm and quantitative statistical analysis. Vibration in radial direction is significantly and positively correlated with that in axial direction by correlation analysis, which means that we can use the data only in one of the directions to carry out the study improving then the efficiency without degrading the accuracy of load classification. The proposed method can well represent the real-time working condition of the crane.

  18. Critical nonequilibrium relaxation in cluster algorithms in the BKT and weak first-order phase transitions

    Science.gov (United States)

    Nonomura, Yoshihiko; Tomita, Yusuke

    Recently we showed that the critical nonequilibrium relaxation in cluster algorithms is widely described by the stretched-exponential decay of physical quantities in the Ising or Heisenberg models. Here we make a similar analysis in the Berezinsky-Kosterlitz-Thouless (BKT) phase transition in the 2D XY model (simple exponential decay) and in the weak first-order phase transition in the 2D q = 5 Potts model (power-law decay), which means that these phase transitions can clearly be characterized by the present analysis. These relaxation behaviors are compared with those in the 3D and 4D XY models (second-order phase transition) and in the 2D q-state Potts models (2 = 6 for strong first-order phase transitions.

  19. Evaluation of the Application of BIM Technology Based on PCA - Q Clustering Algorithm and Choquet Integral

    Directory of Open Access Journals (Sweden)

    Wei Xiaozhao

    2016-09-01

    Full Text Available For the development of the construction industry, the construction of data era is approaching, BIM (building information model with the actual needs of the construction industry has been widely used as a building information clan system software, different software for the practical application of different maturity, through the expert scoring method for the application of BIM technology maturity index mark, establish the evaluation index system, using PCA - Q clustering algorithm for the evaluation index system of classification, comprehensive evaluation in combination with the Choquet integral on the classification of evaluation index system, to achieve a reasonable assessment of the application of BIM technology maturity index. To lay a foundation for the future development of BIM Technology in various fields of construction, at the same time provides direction for the comprehensive application of BIM technology.

  20. Numerical linked-cluster algorithms. II. t-J models on the square lattice.

    Science.gov (United States)

    Rigol, Marcos; Bryant, Tyler; Singh, Rajiv R P

    2007-06-01

    We discuss the application of a recently introduced numerical linked-cluster (NLC) algorithm to strongly correlated itinerant models. In particular, we present a study of thermodynamic observables: chemical potential, entropy, specific heat, and uniform susceptibility for the t-J model on the square lattice, with Jt=0.5 and 0.3. Our NLC results are compared with those obtained from high-temperature expansions (HTE) and the finite-temperature Lanczos method (FTLM). We show that there is a sizeable window in temperature where NLC results converge without extrapolations whereas HTE diverges. Upon extrapolations, the overall agreement between NLC, HTE, and FTLM is excellent in some cases down to 0.25t . At intermediate temperatures NLC results are better controlled than other methods, making it easier to judge the convergence and numerical accuracy of the method.

  1. Evaluation of clustering algorithms at the calorimeter of the PADME experiment

    Science.gov (United States)

    Leonardi, E.; Piperno, G.; Raggi, M.

    2017-10-01

    A possible solution to the Dark Matter problem postulates that it interacts with Standard Model particles through a new force mediated by a “portal”. If the new force has a U(1) gauge structure, the “portal” is a massive photon-like vector particle, called dark photon or A’. The PADME experiment at the DAΦNE Beam-Test Facility (BTF) in Frascati is designed to detect dark photons produced in positron on fixed target annihilations decaying to dark matter (e+e-→γA‧) by measuring the final state missing mass. One of the key roles of the experiment will be played by the electromagnetic calorimeter, which will be used to measure the properties of the final state recoil γ. The calorimeter will be composed by 616 21×21×230 mm3 BGO crystals oriented with the long axis parallel to the beam direction and disposed in a roughly circular shape with a central hole to avoid the pile up due to the large number of low angle Bremsstrahlung photons. The total energy and position of the electromagnetic shower generated by a photon impacting on the calorimeter can be reconstructed by collecting the energy deposits in the cluster of crystals interested by the shower. In PADME we are testing two different clustering algorithms, PADME-Radius and PADME-Island, based on two complementary strategies. In this paper we will describe the two algorithms, with the respective implementations, and report on the results obtained with them at the PADME energy scale (< 1 GeV), both with a GEANT4 based simulation and with an existing 5×5 matrix of BGO crystals tested at the DAΦNE BTF.

  2. A Multiple-Label Guided Clustering Algorithm for Historical Document Dating and Localization.

    Science.gov (United States)

    He, Sheng; Samara, Petros; Burgers, Jan; Schomaker, Lambert

    2016-11-01

    It is of essential importance for historians to know the date and place of origin of the documents they study. It would be a huge advancement for historical scholars if it would be possible to automatically estimate the geographical and temporal provenance of a handwritten document by inferring them from the handwriting style of such a document. We propose a multiple-label guided clustering algorithm to discover the correlations between the concrete low-level visual elements in historical documents and abstract labels, such as date and location. First, a novel descriptor, called histogram of orientations of handwritten strokes, is proposed to extract and describe the visual elements, which is built on a scale-invariant polar-feature space. In addition, the multi-label self-organizing map (MLSOM) is proposed to discover the correlations between the low-level visual elements and their labels in a single framework. Our proposed MLSOM can be used to predict the labels directly. Moreover, the MLSOM can also be considered as a pre-structured clustering method to build a codebook, which contains more discriminative information on date and geography. The experimental results on the medieval paleographic scale data set demonstrate that our method achieves state-of-the-art results.

  3. a Novel 3d Intelligent Fuzzy Algorithm Based on Minkowski-Clustering

    Science.gov (United States)

    Toori, S.; Esmaeily, A.

    2017-09-01

    Assessing and monitoring the state of the earth surface is a key requirement for global change research. In this paper, we propose a new consensus fuzzy clustering algorithm that is based on the Minkowski distance. This research concentrates on Tehran's vegetation mass and its changes during 29 years using remote sensing technology. The main purpose of this research is to evaluate the changes in vegetation mass using a new process by combination of intelligent NDVI fuzzy clustering and Minkowski distance operation. The dataset includes the images of Landsat8 and Landsat TM, from 1989 to 2016. For each year three images of three continuous days were used to identify vegetation impact and recovery. The result was a 3D NDVI image, with one dimension for each day NDVI. The next step was the classification procedure which is a complicated process of categorizing pixels into a finite number of separate classes, based on their data values. If a pixel satisfies a certain set of standards, the pixel is allocated to the class that corresponds to those criteria. This method is less sensitive to noise and can integrate solutions from multiple samples of data or attributes for processing data in the processing industry. The result was a fuzzy one dimensional image. This image was also computed for the next 28 years. The classification was done in both specified urban and natural park areas of Tehran. Experiments showed that our method worked better in classifying image pixels in comparison with the standard classification methods.

  4. Evaluating clustering methods within the Artificial Ecosystem Algorithm and their application to bike redistribution in London.

    Science.gov (United States)

    Adham, Manal T; Bentley, Peter J

    2016-08-01

    This paper proposes and evaluates a solution to the truck redistribution problem prominent in London's Santander Cycle scheme. Due to the complexity of this NP-hard combinatorial optimisation problem, no efficient optimisation techniques are known to solve the problem exactly. This motivates our use of the heuristic Artificial Ecosystem Algorithm (AEA) to find good solutions in a reasonable amount of time. The AEA is designed to take advantage of highly distributed computer architectures and adapt to changing problems. In the AEA a problem is first decomposed into its relative sub-components; they then evolve solution building blocks that fit together to form a single optimal solution. Three variants of the AEA centred on evaluating clustering methods are presented: the baseline AEA, the community-based AEA which groups stations according to journey flows, and the Adaptive AEA which actively modifies clusters to cater for changes in demand. We applied these AEA variants to the redistribution problem prominent in bike share schemes (BSS). The AEA variants are empirically evaluated using historical data from Santander Cycles to validate the proposed approach and prove its potential effectiveness. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  5. Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clusters.

    Science.gov (United States)

    Lan, Haidong; Chan, Yuandong; Xu, Kai; Schmidt, Bertil; Peng, Shaoliang; Liu, Weiguo

    2016-07-19

    Computing alignments between two or more sequences are common operations frequently performed in computational molecular biology. The continuing growth of biological sequence databases establishes the need for their efficient parallel implementation on modern accelerators. This paper presents new approaches to high performance biological sequence database scanning with the Smith-Waterman algorithm and the first stage of progressive multiple sequence alignment based on the ClustalW heuristic on a Xeon Phi-based compute cluster. Our approach uses a three-level parallelization scheme to take full advantage of the compute power available on this type of architecture; i.e. cluster-level data parallelism, thread-level coarse-grained parallelism, and vector-level fine-grained parallelism. Furthermore, we re-organize the sequence datasets and use Xeon Phi shuffle operations to improve I/O efficiency. Evaluations show that our method achieves a peak overall performance up to 220 GCUPS for scanning real protein sequence databanks on a single node consisting of two Intel E5-2620 CPUs and two Intel Xeon Phi 7110P cards. It also exhibits good scalability in terms of sequence length and size, and number of compute nodes for both database scanning and multiple sequence alignment. Furthermore, the achieved performance is highly competitive in comparison to optimized Xeon Phi and GPU implementations. Our implementation is available at https://github.com/turbo0628/LSDBS-mpi .

  6. An integrated portfolio optimisation procedure based on data envelopment analysis, artificial bee colony algorithm and genetic programming

    Science.gov (United States)

    Hsu, Chih-Ming

    2014-12-01

    Portfolio optimisation is an important issue in the field of investment/financial decision-making and has received considerable attention from both researchers and practitioners. However, besides portfolio optimisation, a complete investment procedure should also include the selection of profitable investment targets and determine the optimal timing for buying/selling the investment targets. In this study, an integrated procedure using data envelopment analysis (DEA), artificial bee colony (ABC) and genetic programming (GP) is proposed to resolve a portfolio optimisation problem. The proposed procedure is evaluated through a case study on investing in stocks in the semiconductor sub-section of the Taiwan stock market for 4 years. The potential average 6-month return on investment of 9.31% from 1 November 2007 to 31 October 2011 indicates that the proposed procedure can be considered a feasible and effective tool for making outstanding investment plans, and thus making profits in the Taiwan stock market. Moreover, it is a strategy that can help investors to make profits even when the overall stock market suffers a loss.

  7. Utility of the k-means clustering algorithm in differentiating apparent diffusion coefficient values of benign and malignant neck pathologies.

    Science.gov (United States)

    Srinivasan, A; Galbán, C J; Johnson, T D; Chenevert, T L; Ross, B D; Mukherji, S K

    2010-04-01

    Does the K-means algorithm do a better job of differentiating benign and malignant neck pathologies compared to only mean ADC? The objective of our study was to analyze the differences between ADC partitions to evaluate whether the K-means technique can be of additional benefit to whole-lesion mean ADC alone in distinguishing benign and malignant neck pathologies. MR imaging studies of 10 benign and 10 malignant proved neck pathologies were postprocessed on a PC by using in-house software developed in Matlab. Two neuroradiologists manually contoured the lesions, with the ADC values within each lesion clustered into 2 (low, ADC-ADC(L); high, ADC-ADC(H)) and 3 partitions (ADC(L); intermediate, ADC-ADC(I); ADC(H)) by using the K-means clustering algorithm. An unpaired 2-tailed Student t test was performed for all metrics to determine statistical differences in the means of the benign and malignant pathologies. A statistically significant difference between the mean ADC(L) clusters in benign and malignant pathologies was seen in the 3-cluster models of both readers (P = .03 and .022, respectively) and the 2-cluster model of reader 2 (P = .04), with the other metrics (ADC(H), ADC(I); whole-lesion mean ADC) not revealing any significant differences. ROC curves demonstrated the quantitative differences in mean ADC(H) and ADC(L) in both the 2- and 3-cluster models to be predictive of malignancy (2 clusters: P = .008, area under curve = 0.850; 3 clusters: P = .01, area under curve = 0.825). The K-means clustering algorithm that generates partitions of large datasets may provide a better characterization of neck pathologies and may be of additional benefit in distinguishing benign and malignant neck pathologies compared with whole-lesion mean ADC alone.

  8. A novel cloning template designing method by using an artificial bee colony algorithm for edge detection of CNN based imaging sensors.

    Science.gov (United States)

    Parmaksızoğlu, Selami; Alçı, Mustafa

    2011-01-01

    Cellular Neural Networks (CNNs) have been widely used recently in applications such as edge detection, noise reduction and object detection, which are among the main computer imaging processes. They can also be realized as hardware based imaging sensors. The fact that hardware CNN models produce robust and effective results has attracted the attention of researchers using these structures within image sensors. Realization of desired CNN behavior such as edge detection can be achieved by correctly setting a cloning template without changing the structure of the CNN. To achieve different behaviors effectively, designing a cloning template is one of the most important research topics in this field. In this study, the edge detecting process that is used as a preliminary process for segmentation, identification and coding applications is conducted by using CNN structures. In order to design the cloning template of goal-oriented CNN architecture, an Artificial Bee Colony (ABC) algorithm which is inspired from the foraging behavior of honeybees is used and the performance analysis of ABC for this application is examined with multiple runs. The CNN template generated by the ABC algorithm is tested by using artificial and real test images. The results are subjectively and quantitatively compared with well-known classical edge detection methods, and other CNN based edge detector cloning templates available in the imaging literature. The results show that the proposed method is more successful than other methods.

  9. A Novel Cloning Template Designing Method by Using an Artificial Bee Colony Algorithm for Edge Detection of CNN Based Imaging Sensors

    Science.gov (United States)

    Parmaksızoğlu, Selami; Alçı, Mustafa

    2011-01-01

    Cellular Neural Networks (CNNs) have been widely used recently in applications such as edge detection, noise reduction and object detection, which are among the main computer imaging processes. They can also be realized as hardware based imaging sensors. The fact that hardware CNN models produce robust and effective results has attracted the attention of researchers using these structures within image sensors. Realization of desired CNN behavior such as edge detection can be achieved by correctly setting a cloning template without changing the structure of the CNN. To achieve different behaviors effectively, designing a cloning template is one of the most important research topics in this field. In this study, the edge detecting process that is used as a preliminary process for segmentation, identification and coding applications is conducted by using CNN structures. In order to design the cloning template of goal-oriented CNN architecture, an Artificial Bee Colony (ABC) algorithm which is inspired from the foraging behavior of honeybees is used and the performance analysis of ABC for this application is examined with multiple runs. The CNN template generated by the ABC algorithm is tested by using artificial and real test images. The results are subjectively and quantitatively compared with well-known classical edge detection methods, and other CNN based edge detector cloning templates available in the imaging literature. The results show that the proposed method is more successful than other methods. PMID:22163903

  10. WEB NEWS DOCUMENTS CLUSTERING IN INDONESIAN LANGUAGE USING SINGULAR VALUE DECOMPOSITION-PRINCIPAL COMPONENT ANALYSIS (SVDPCA AND ANT ALGORITHMS

    Directory of Open Access Journals (Sweden)

    Arif Fadllullah

    2016-02-01

    Full Text Available Ant-based document clustering is a cluster method of measuring text documents similarity based on the shortest path between nodes (trial phase and determines the optimal clusters of sequence document similarity (dividing phase. The processing time of trial phase Ant algorithms to make document vectors is very long because of high dimensional Document-Term Matrix (DTM. In this paper, we proposed a document clustering method for optimizing dimension reduction using Singular Value Decomposition-Principal Component Analysis (SVDPCA and Ant algorithms. SVDPCA reduces size of the DTM dimensions by converting freq-term of conventional DTM to score-pc of Document-PC Matrix (DPCM. Ant algorithms creates documents clustering using the vector space model based on the dimension reduction result of DPCM. The experimental results on 506 news documents in Indonesian language demonstrated that the proposed method worked well to optimize dimension reduction up to 99.7%. We could speed up execution time efficiently of the trial phase and maintain the best F-measure achieved from experiments was 0.88 (88%.

  11. A Fast Exact k-Nearest Neighbors Algorithm for High Dimensional Search Using k-Means Clustering and Triangle Inequality.

    Science.gov (United States)

    Wang, Xueyi

    2012-02-08

    The k-nearest neighbors (k-NN) algorithm is a widely used machine learning method that finds nearest neighbors of a test object in a feature space. We present a new exact k-NN algorithm called kMkNN (k-Means for k-Nearest Neighbors) that uses the k-means clustering and the triangle inequality to accelerate the searching for nearest neighbors in a high dimensional space. The kMkNN algorithm has two stages. In the buildup stage, instead of using complex tree structures such as metric trees, kd-trees, or ball-tree, kMkNN uses a simple k-means clustering method to preprocess the training dataset. In the searching stage, given a query object, kMkNN finds nearest training objects starting from the nearest cluster to the query object and uses the triangle inequality to reduce the distance calculations. Experiments show that the performance of kMkNN is surprisingly good compared to the traditional k-NN algorithm and tree-based k-NN algorithms such as kd-trees and ball-trees. On a collection of 20 datasets with up to 10(6) records and 10(4) dimensions, kMkNN shows a 2-to 80-fold reduction of distance calculations and a 2- to 60-fold speedup over the traditional k-NN algorithm for 16 datasets. Furthermore, kMkNN performs significant better than a kd-tree based k-NN algorithm for all datasets and performs better than a ball-tree based k-NN algorithm for most datasets. The results show that kMkNN is effective for searching nearest neighbors in high dimensional spaces.

  12. A New PV Array Fault Diagnosis Method Using Fuzzy C-Mean Clustering and Fuzzy Membership Algorithm

    Directory of Open Access Journals (Sweden)

    Qiang Zhao

    2018-01-01

    Full Text Available Photovoltaic (PV power station faults in the natural environment mainly occur in the PV array, and the accurate fault diagnosis is of particular significance for the safe and efficient PV power plant operation. The PV array’s electrical behavior characteristics under fault conditions is analyzed in this paper, and a novel PV array fault diagnosis method is proposed based on fuzzy C-mean (FCM and fuzzy membership algorithms. Firstly, clustering analysis of PV array fault samples is conducted using the FCM algorithm, indicating that there is a fixed relationship between the distribution characteristics of cluster centers and the different fault, then the fault samples are classified effectively. The membership degrees of all fault data and cluster centers are then determined by the fuzzy membership algorithm for the final fault diagnosis. Simulation analysis indicated that the diagnostic accuracy of the proposed method was 96%. Field experiments further verified the correctness and effectiveness of the proposed method. In this paper, various types of fault distribution features are effectively identified by the FCM algorithm, whether the PV array operation parameters belong to the fault category is determined by fuzzy membership algorithm, and the advantage of the proposed method is it can classify the fault data from normal operating data without foreknowledge.

  13. Automatic determination of the arterial input function in dynamic susceptibility contrast MRI: comparison of different reproducible clustering algorithms

    International Nuclear Information System (INIS)

    Yin, Jiandong; Yang, Jiawen; Guo, Qiyong

    2015-01-01

    Arterial input function (AIF) plays an important role in the quantification of cerebral hemodynamics. The purpose of this study was to select the best reproducible clustering method for AIF detection by comparing three algorithms reported previously in terms of detection accuracy and computational complexity. First, three reproducible clustering methods, normalized cut (Ncut), hierarchy (HIER), and fast affine propagation (FastAP), were applied independently to simulated data which contained the true AIF. Next, a clinical verification was performed where 42 subjects participated in dynamic susceptibility contrast MRI (DSC-MRI) scanning. The manual AIF and AIFs based on the different algorithms were obtained. The performance of each algorithm was evaluated based on shape parameters of the estimated AIFs and the true or manual AIF. Moreover, the execution time of each algorithm was recorded to determine the algorithm that operated more rapidly in clinical practice. In terms of the detection accuracy, Ncut and HIER method produced similar AIF detection results, which were closer to the expected AIF and more accurate than those obtained using FastAP method; in terms of the computational efficiency, the Ncut method required the shortest execution time. Ncut clustering appears promising because it facilitates the automatic and robust determination of AIF with high accuracy and efficiency. (orig.)

  14. A modified possibilistic fuzzy c-means clustering algorithm for bias field estimation and segmentation of brain MR image.

    Science.gov (United States)

    Ji, Ze-Xuan; Sun, Quan-Sen; Xia, De-Shen

    2011-07-01

    A modified possibilistic fuzzy c-means clustering algorithm is presented for fuzzy segmentation of magnetic resonance (MR) images that have been corrupted by intensity inhomogeneities and noise. By introducing a novel adaptive method to compute the weights of local spatial in the objective function, the new adaptive fuzzy clustering algorithm is capable of utilizing local contextual information to impose local spatial continuity, thus allowing the suppression of noise and helping to resolve classification ambiguity. To estimate the intensity inhomogeneity, the global intensity is introduced into the coherent local intensity clustering algorithm and takes the local and global intensity information into account. The segmentation target therefore is driven by two forces to smooth the derived optimal bias field and improve the accuracy of the segmentation task. The proposed method has been successfully applied to 3 T, 7 T, synthetic and real MR images with desirable results. Comparisons with other approaches demonstrate the superior performance of the proposed algorithm. Moreover, the proposed algorithm is robust to initialization, thereby allowing fully automatic applications. Copyright © 2010 Elsevier Ltd. All rights reserved.

  15. A Hybrid Method for Image Segmentation Based on Artificial Fish Swarm Algorithm and Fuzzy c-Means Clustering

    Directory of Open Access Journals (Sweden)

    Li Ma

    2015-01-01

    Full Text Available Image segmentation plays an important role in medical image processing. Fuzzy c-means (FCM clustering is one of the popular clustering algorithms for medical image segmentation. However, FCM has the problems of depending on initial clustering centers, falling into local optimal solution easily, and sensitivity to noise disturbance. To solve these problems, this paper proposes a hybrid artificial fish swarm algorithm (HAFSA. The proposed algorithm combines artificial fish swarm algorithm (AFSA with FCM whose advantages of global optimization searching and parallel computing ability of AFSA are utilized to find a superior result. Meanwhile, Metropolis criterion and noise reduction mechanism are introduced to AFSA for enhancing the convergence rate and antinoise ability. The artificial grid graph and Magnetic Resonance Imaging (MRI are used in the experiments, and the experimental results show that the proposed algorithm has stronger antinoise ability and higher precision. A number of evaluation indicators also demonstrate that the effect of HAFSA is more excellent than FCM and suppressed FCM (SFCM.

  16. BoCluSt: Bootstrap Clustering Stability Algorithm for Community Detection.

    Science.gov (United States)

    Garcia, Carlos

    2016-01-01

    The identification of modules or communities in sets of related variables is a key step in the analysis and modeling of biological systems. Procedures for this identification are usually designed to allow fast analyses of very large datasets and may produce suboptimal results when these sets are of a small to moderate size. This article introduces BoCluSt, a new, somewhat more computationally intensive, community detection procedure that is based on combining a clustering algorithm with a measure of stability under bootstrap resampling. Both computer simulation and analyses of experimental data showed that BoCluSt can outperform current procedures in the identification of multiple modules in data sets with a moderate number of variables. In addition, the procedure provides users with a null distribution of results to evaluate the support for the existence of community structure in the data. BoCluSt takes individual measures for a set of variables as input, and may be a valuable and robust exploratory tool of network analysis, as it provides 1) an estimation of the best partition of variables into modules, 2) a measure of the support for the existence of modular structures, and 3) an overall description of the whole structure, which may reveal hierarchical modular situations, in which modules are composed of smaller sub-modules.

  17. Intensity-based signal separation algorithm for accuratequantification of clustered centrosomes in tissue sections

    Energy Technology Data Exchange (ETDEWEB)

    Fleisch, Markus C.; Maxell, Christopher A.; Kuper, Claudia K.; Brown, Erika T.; Parvin, Bahram; Barcellos-Hoff, Mary-Helen; Costes,Sylvain V.

    2006-03-08

    Centrosomes are small organelles that organize the mitoticspindle during cell division and are also involved in cell shape andpolarity. Within epithelial tumors, such as breast cancer, and somehematological tumors, centrosome abnormalities (CA) are common, occurearly in disease etiology, and correlate with chromosomal instability anddisease stage. In situ quantification of CA by optical microscopy ishampered by overlap and clustering of these organelles, which appear asfocal structures. CA has been frequently associated with Tp53 status inpremalignant lesions and tumors. Here we describe an approach toaccurately quantify centrosomes in tissue sections and tumors.Considering proliferation and baseline amplification rate the resultingpopulation based ratio of centrosomes per nucleus allow the approximationof the proportion of cells with CA. Using this technique we show that20-30 percent of cells have amplified centrosomes in Tp53 null mammarytumors. Combining fluorescence detection, deconvolution microscopy and amathematical algorithm applied to a maximum intensity projection we showthat this approach is superior to traditional investigator based visualanalysis or threshold-based techniques.

  18. CAF: Cluster algorithm and a-star with fuzzy approach for lifetime enhancement in wireless sensor networks

    KAUST Repository

    Yuan, Y.

    2014-04-28

    Energy is a major factor in designing wireless sensor networks (WSNs). In particular, in the real world, battery energy is limited; thus the effective improvement of the energy becomes the key of the routing protocols. Besides, the sensor nodes are always deployed far away from the base station and the transmission energy consumption is index times increasing with the increase of distance as well. This paper proposes a new routing method for WSNs to extend the network lifetime using a combination of a clustering algorithm, a fuzzy approach, and an A-star method. The proposal is divided into two steps. Firstly, WSNs are separated into clusters using the Stable Election Protocol (SEP) method. Secondly, the combined methods of fuzzy inference and A-star algorithm are adopted, taking into account the factors such as the remaining power, the minimum hops, and the traffic numbers of nodes. Simulation results demonstrate that the proposed method has significant effectiveness in terms of balancing energy consumption as well as maximizing the network lifetime by comparing the performance of the A-star and fuzzy (AF) approach, cluster and fuzzy (CF)method, cluster and A-star (CA)method, A-star method, and SEP algorithm under the same routing criteria. 2014 Yali Yuan et al.

  19. A Negative Selection Algorithm Based on Hierarchical Clustering of Self Set and its Application in Anomaly Detection

    Directory of Open Access Journals (Sweden)

    Wen Chen

    2011-08-01

    Full Text Available A negative selection algorithm based on the hierarchical clustering of self set HC-RNSA is introduced in this paper. Several strategies are applied to improve the algorithm performance. First, the self data set is replaced by the self cluster centers to compare with the detector candidates in each cluster level. As the number of self clusters is much less than the self set size, the detector generation efficiency is improved. Second, during the detector generation process, the detector candidates are restricted to the lower coverage space to reduce detector redundancy. In the article, the problem that the distances between antigens coverage to a constant value in the high dimensional space is analyzed, accordingly the Principle Component Analysis (PCA method is used to reduce the data dimension, and the fractional distance function is employed to enhance the distinctiveness between the self and non-self antigens. The detector generation procedure is terminated when the expected non-self coverage is reached. The theory analysis and experimental results demonstrate that the detection rate of HC-RNSA is higher than that of the traditional negative selection algorithms while the false alarm rate and time cost are reduced.

  20. Application of k-means clustering algorithm in grouping the DNA sequences of hepatitis B virus (HBV)

    Science.gov (United States)

    Bustamam, A.; Tasman, H.; Yuniarti, N.; Frisca, Mursidah, I.

    2017-07-01

    Based on WHO data, an estimated of 15 millions people worldwide who are infected with hepatitis B (HBsAg+), which is caused by HBV virus, are also infected by hepatitis D, which is caused by HDV virus. Hepatitis D infection can occur simultaneously with hepatitis B (co infection) or after a person is exposed to chronic hepatitis B (super infection). Since HDV cannot live without HBV, HDV infection is closely related to HBV infection, hence it is very realistic that every effort of prevention against hepatitis B can indirectly prevent hepatitis D. This paper presents clustering of HBV DNA sequences by using k-means clustering algorithm and R programming. Clustering processes are started with collecting HBV DNA sequences from GenBank, then performing extraction HBV DNA sequences using n-mers frequency and furthermore the extraction results are collected as a matrix and normalized using the min-max normalization with interval [0, 1] which will later be used as an input data. The number of clusters is two and the initial centroid selected of the cluster is chosen randomly. In each iteration, the distance of every object to each centroid are calculated using the Euclidean distance and the minimum distance is selected to determine the membership in a cluster until two convergent clusters are created. As the result, the HBV viruses in the first cluster is more virulent than the HBV viruses in the second cluster, so the HBV viruses in the first cluster can potentially evolve with HDV viruses that cause hepatitis D.

  1. Entropy-Based Incomplete Cholesky Decomposition for a Scalable Spectral Clustering Algorithm: Computational Studies and Sensitivity Analysis

    Directory of Open Access Journals (Sweden)

    Rocco Langone

    2016-05-01

    Full Text Available Spectral clustering methods allow datasets to be partitioned into clusters by mapping the input datapoints into the space spanned by the eigenvectors of the Laplacian matrix. In this article, we make use of the incomplete Cholesky decomposition (ICD to construct an approximation of the graph Laplacian and reduce the size of the related eigenvalue problem from N to m, with m ≪ N . In particular, we introduce a new stopping criterion based on normalized mutual information between consecutive partitions, which terminates the ICD when the change in the cluster assignments is below a given threshold. Compared with existing ICD-based spectral clustering approaches, the proposed method allows the reduction of the number m of selected pivots (i.e., to obtain a sparser model and at the same time, to maintain high clustering quality. The method scales linearly with respect to the number of input datapoints N and has low memory requirements, because only matrices of size N × m and m × m are calculated (in contrast to standard spectral clustering, where the construction of the full N × N similarity matrix is needed. Furthermore, we show that the number of clusters can be reliably selected based on the gap heuristics computed using just a small matrix R of size m × m instead of the entire graph Laplacian. The effectiveness of the proposed algorithm is tested on several datasets.

  2. Clustering box office movie with Partition Around Medoids (PAM) Algorithm based on Text Mining of Indonesian subtitle

    Science.gov (United States)

    Alfarizy, A. D.; Indahwati; Sartono, B.

    2017-03-01

    Indonesia is the largest Hollywood movie industry target market in Southeast Asia in 2015. Hollywood movies distributed in Indonesia targeted people in all range of ages including children. Low awareness of guiding children while watching movies make them could watch any rated films even the unsuitable ones for their ages. Even after being translated into Bahasa and passed the censorship phase, words that uncomfortable for children to watch still exist. The purpose of this research is to cluster box office Hollywood movies based on Indonesian subtitle, revenue, IMDb user rating and genres as one of the reference for adults to choose right movies for their children to watch. Text mining is used to extract words from the subtitles and count the frequency for three group of words (bad words, sexual words and terror words), while Partition Around Medoids (PAM) Algorithm with Gower similarity coefficient as proximity matrix is used as clustering method. We clustered 624 movies from 2006 until first half of 2016 from IMDb. Cluster with highest silhouette coefficient value (0.36) is the one with 5 clusters. Animation, Adventure and Comedy movies with high revenue like in cluster 5 is recommended for children to watch, while Comedy movies with high revenue like in cluster 4 should be avoided to watch.

  3. Developing a reading concentration monitoring system by applying an artificial bee colony algorithm to e-books in an intelligent classroom.

    Science.gov (United States)

    Hsu, Chia-Cheng; Chen, Hsin-Chin; Su, Yen-Ning; Huang, Kuo-Kuang; Huang, Yueh-Min

    2012-10-22

    A growing number of educational studies apply sensors to improve student learning in real classroom settings. However, how can sensors be integrated into classrooms to help instructors find out students' reading concentration rates and thus better increase learning effectiveness? The aim of the current study was to develop a reading concentration monitoring system for use with e-books in an intelligent classroom and to help instructors find out the students' reading concentration rates. The proposed system uses three types of sensor technologies, namely a webcam, heartbeat sensor, and blood oxygen sensor to detect the learning behaviors of students by capturing various physiological signals. An artificial bee colony (ABC) optimization approach is applied to the data gathered from these sensors to help instructors understand their students' reading concentration rates in a classroom learning environment. The results show that the use of the ABC algorithm in the proposed system can effectively obtain near-optimal solutions. The system has a user-friendly graphical interface, making it easy for instructors to clearly understand the reading status of their students.

  4. On the application of artificial bee colony (ABC algorithm for optimization of well placements in fractured reservoirs; efficiency comparison with the particle swarm optimization (PSO methodology

    Directory of Open Access Journals (Sweden)

    Behzad Nozohour-leilabady

    2016-03-01

    Full Text Available The application of a recent optimization technique, the artificial bee colony (ABC, was investigated in the context of finding the optimal well locations. The ABC performance was compared with the corresponding results from the particle swarm optimization (PSO algorithm, under essentially similar conditions. Treatment of out-of-boundary solution vectors was accomplished via the Periodic boundary condition (PBC, which presumably accelerates convergence towards the global optimum. Stochastic searches were initiated from several random staring points, to minimize starting-point dependency in the established results. The optimizations were aimed at maximizing the Net Present Value (NPV objective function over the considered oilfield production durations. To deal with the issue of reservoir heterogeneity, random permeability was applied via normal/uniform distribution functions. In addition, the issue of increased number of optimization parameters was address, by considering scenarios with multiple injector and producer wells, and cases with deviated wells in a real reservoir model. The typical results prove ABC to excel PSO (in the cases studied after relatively short optimization cycles, indicating the great premise of ABC methodology to be used for well-optimization purposes.

  5. A Local Search Algorithm for Clustering in Software as a Service Networks

    NARCIS (Netherlands)

    J.P. van der Gaast (Jelmer); C.A. Rietveld (Niels); A.F. Gabor (Adriana); Y. Zhang (Yingqian)

    2011-01-01

    textabstractIn this paper we present and analyze a model for clustering in networks that offer Software as a Service (SaaS). In this problem, organizations requesting a set of applications have to be assigned to clusters such that the costs of opening clusters and installing the necessary

  6. The implementation of hybrid clustering using fuzzy c-means and divisive algorithm for analyzing DNA human Papillomavirus cause of cervical cancer

    Science.gov (United States)

    Andryani, Diyah Septi; Bustamam, Alhadi; Lestari, Dian

    2017-03-01

    Clustering aims to classify the different patterns into groups called clusters. In this clustering method, we use n-mers frequency to calculate the distance matrix which is considered more accurate than using the DNA alignment. The clustering results could be used to discover biologically important sub-sections and groups of genes. Many clustering methods have been developed, while hard clustering methods considered less accurate than fuzzy clustering methods, especially if it is used for outliers data. Among fuzzy clustering methods, fuzzy c-means is one the best known for its accuracy and simplicity. Fuzzy c-means clustering uses membership function variable, which refers to how likely the data could be members into a cluster. Fuzzy c-means clustering works using the principle of minimizing the objective function. Parameters of membership function in fuzzy are used as a weighting factor which is also called the fuzzier. In this study we implement hybrid clustering using fuzzy c-means and divisive algorithm which could improve the accuracy of cluster membership compare to traditional partitional approach only. In this study fuzzy c-means is used in the first step to find partition results. Furthermore divisive algorithms will run on the second step to find sub-clusters and dendogram of phylogenetic tree. To find the best number of clusters is determined using the minimum value of Davies Bouldin Index (DBI) of the cluster results. In this research, the results show that the methods introduced in this paper is better than other partitioning methods. Finally, we found 3 clusters with DBI value of 1.126628 at first step of clustering. Moreover, DBI values after implementing the second step of clustering are always producing smaller IDB values compare to the results of using first step clustering only. This condition indicates that the hybrid approach in this study produce better performance of the cluster results, in term its DBI values.

  7. Mitigate the impact of transmitter finite extinction ratio using K-means clustering algorithm for 16QAM signal

    Science.gov (United States)

    Yu, Miao; Li, Yan; Shu, Tong; Zhang, Yifan; Hong, Xiaobin; Qiu, Jifang; Zuo, Yong; Guo, Hongxiang; Li, Wei; Wu, Jian

    2018-02-01

    A method of recognizing 16QAM signal based on k-means clustering algorithm is proposed to mitigate the impact of transmitter finite extinction ratio. There are pilot symbols with 0.39% overhead assigned to be regarded as initial centroids of k-means clustering algorithm. Simulation result in 10 GBaud 16QAM system shows that the proposed method obtains higher precision of identification compared with traditional decision method for finite ER and IQ mismatch. Specially, the proposed method improves the required OSNR by 5.5 dB, 4.5 dB, 4 dB and 3 dB at FEC limit with ER= 12 dB, 16 dB, 20 dB and 24 dB, respectively, and the acceptable bias error and IQ mismatch range is widened by 767% and 360% with ER =16 dB, respectively.

  8. TOWARDS FINDING A NEW KERNELIZED FUZZY C-MEANS CLUSTERING ALGORITHM

    Directory of Open Access Journals (Sweden)

    Samarjit Das

    2014-04-01

    Full Text Available Kernelized Fuzzy C-Means clustering technique is an attempt to improve the performance of the conventional Fuzzy C-Means clustering technique. Recently this technique where a kernel-induced distance function is used as a similarity measure instead of a Euclidean distance which is used in the conventional Fuzzy C-Means clustering technique, has earned popularity among research community. Like the conventional Fuzzy C-Means clustering technique this technique also suffers from inconsistency in its performance due to the fact that here also the initial centroids are obtained based on the randomly initialized membership values of the objects. Our present work proposes a new method where we have applied the Subtractive clustering technique of Chiu as a preprocessor to Kernelized Fuzzy CMeans clustering technique. With this new method we have tried not only to remove the inconsistency of Kernelized Fuzzy C-Means clustering technique but also to deal with the situations where the number of clusters is not predetermined. We have also provided a comparison of our method with the Subtractive clustering technique of Chiu and Kernelized Fuzzy C-Means clustering technique using two validity measures namely Partition Coefficient and Clustering Entropy.

  9. A Multi-Hop Energy Neutral Clustering Algorithm for Maximizing Network Information Gathering in Energy Harvesting Wireless Sensor Networks.

    Science.gov (United States)

    Yang, Liu; Lu, Yinzhi; Zhong, Yuanchang; Wu, Xuegang; Yang, Simon X

    2015-12-26

    Energy resource limitation is a severe problem in traditional wireless sensor networks (WSNs) because it restricts the lifetime of network. Recently, the emergence of energy harvesting techniques has brought with them the expectation to overcome this problem. In particular, it is possible for a sensor node with energy harvesting abilities to work perpetually in an Energy Neutral state. In this paper, a Multi-hop Energy Neutral Clustering (MENC) algorithm is proposed to construct the optimal multi-hop clustering architecture in energy harvesting WSNs, with the goal of achieving perpetual network operation. All cluster heads (CHs) in the network act as routers to transmit data to base station (BS) cooperatively by a multi-hop communication method. In addition, by analyzing the energy consumption of intra- and inter-cluster data transmission, we give the energy neutrality constraints. Under these constraints, every sensor node can work in an energy neutral state, which in turn provides perpetual network operation. Furthermore, the minimum network data transmission cycle is mathematically derived using convex optimization techniques while the network information gathering is maximal. Simulation results show that our protocol can achieve perpetual network operation, so that the consistent data delivery is guaranteed. In addition, substantial improvements on the performance of network throughput are also achieved as compared to the famous traditional clustering protocol LEACH and recent energy harvesting aware clustering protocols.

  10. Deconvoluting simulated metagenomes: the performance of hard- and soft- clustering algorithms applied to metagenomic chromosome conformation capture (3C

    Directory of Open Access Journals (Sweden)

    Matthew Z. DeMaere

    2016-11-01

    Full Text Available Background Chromosome conformation capture, coupled with high throughput DNA sequencing in protocols like Hi-C and 3C-seq, has been proposed as a viable means of generating data to resolve the genomes of microorganisms living in naturally occuring environments. Metagenomic Hi-C and 3C-seq datasets have begun to emerge, but the feasibility of resolving genomes when closely related organisms (strain-level diversity are present in the sample has not yet been systematically characterised. Methods We developed a computational simulation pipeline for metagenomic 3C and Hi-C sequencing to evaluate the accuracy of genomic reconstructions at, above, and below an operationally defined species boundary. We simulated datasets and measured accuracy over a wide range of parameters. Five clustering algorithms were evaluated (2 hard, 3 soft using an adaptation of the extended B-cubed validation measure. Results When all genomes in a sample are below 95% sequence identity, all of the tested clustering algorithms performed well. When sequence data contains genomes above 95% identity (our operational definition of strain-level diversity, a naive soft-clustering extension of the Louvain method achieves the highest performance. Discussion Previously, only hard-clustering algorithms have been applied to metagenomic 3C and Hi-C data, yet none of these perform well when strain-level diversity exists in a metagenomic sample. Our simple extension of the Louvain method performed the best in these scenarios, however, accuracy remained well below the levels observed for samples without strain-level diversity. Strain resolution is also highly dependent on the amount of available 3C sequence data, suggesting that depth of sequencing must be carefully considered during experimental design. Finally, there appears to be great scope to improve the accuracy of strain resolution through further algorithm development.

  11. Automated compilation of pseudo-lithology maps from geophysical data sets: a comparison of Gustafson-Kessel and fuzzy c-means cluster algorithms

    Science.gov (United States)

    Paasche, Hendrik; Eberle, Detlef

    2011-11-01

    The fuzzy partitioning Gustafson-Kessel cluster algorithm is employed for rapid and objective integration of multi-parameter Earth-science related databases. We begin by evaluating the Gustafson-Kessel algorithm using the example of a synthetic study and compare the results to those obtained from the more widely employed fuzzy c-means algorithm. Since the Gustafson-Kessel algorithm goes beyond the potential of the fuzzy c-means algorithm by adapting the shape of the clusters to be detected and enabling a manual control of the cluster volume, we believe the results obtained from Gustafson-Kessel algorithm to be superior. Accordingly, a field database comprising airborne and ground-based geophysical data sets is analysed, which has previously been classified by means of the fuzzy c-means algorithm. This database is integrated using the Gustafson-Kessel algorithm thus minimising the amount of empirical data processing required before and after fuzzy c-means clustering. The resultant zonal geophysical map is more evenly clustered matching regional geology information available from the survey area. Even additional information about linear structures, e.g. as typically caused by the presence of dolerite dykes or faults, is visible in the zonal map obtained from Gustafson-Kessel cluster analysis.

  12. Algorithms

    Indian Academy of Sciences (India)

    have been found in Vedic Mathematics which are dated much before Euclid's algorithm. A programming language Is used to describe an algorithm for execution on a computer. An algorithm expressed using a programming language Is called a program. From activities 1-3, we can observe that: • Each activity is a command.

  13. Locating critical points on multi-dimensional surfaces by genetic algorithm: test cases including normal and perturbed argon clusters

    Science.gov (United States)

    Chaudhury, Pinaki; Bhattacharyya, S. P.

    1999-03-01

    It is demonstrated that Genetic Algorithm in a floating point realisation can be a viable tool for locating critical points on a multi-dimensional potential energy surface (PES). For small clusters, the standard algorithm works well. For bigger ones, the search for global minimum becomes more efficient when used in conjunction with coordinate stretching, and partitioning of the strings into a core part and an outer part which are alternately optimized The method works with equal facility for locating minima, local as well as global, and saddle points (SP) of arbitrary orders. The search for minima requires computation of the gradient vector, but not the Hessian, while that for SP's requires the information of the gradient vector and the Hessian, the latter only at some specific points on the path. The method proposed is tested on (i) a model 2-d PES (ii) argon clusters (Ar 4-Ar 30) in which argon atoms interact via Lennard-Jones potential, (iii) Ar mX, m=12 clusters where X may be a neutral atom or a cation. We also explore if the method could also be used to construct what may be called a stochastic representation of the reaction path on a given PES with reference to conformational changes in Ar n clusters.

  14. Evaluation of Modified K-Means Clustering Algorithm in Crop Prediction

    OpenAIRE

    Utkarsha P. Narkhede; K.P.Adhiya

    2014-01-01

    An Agricultural sector is in need for well-organized system to predict and improve the crop over the world. The complexity of predicting the best crops is high due to unavailability of proper knowledge discovery in crop knowledgebase which affects the quality of prediction. In data mining, clustering is a crucial step in mining useful information. The clustering techniques such as k-Means, Expectation Maximization, Hierarchical Micro Clustering, Constrained k-Means, SWK k-Means, k-Means++, im...

  15. A Fast Density-Based Clustering Algorithm for Real-Time Internet of Things Stream

    OpenAIRE

    Amini, Amineh; Saboohi, Hadi; Ying Wah, Teh; Herawan, Tutut

    2014-01-01

    Data streams are continuously generated over time from Internet of Things (IoT) devices. The faster all of this data is analyzed, its hidden trends and patterns discovered, and new strategies created, the faster action can be taken, creating greater value for organizations. Density-based method is a prominent class in clustering data streams. It has the ability to detect arbitrary shape clusters, to handle outlier, and it does not need the number of clusters in advance. Therefore, density-bas...

  16. Colonial Institutions

    DEFF Research Database (Denmark)

    McAtackney, Laura; Palmer, Russell

    2016-01-01

    Archaeologically based explorations of colonialism or institutions are common case-studies in global historical archaeology, but the “colonial institution”—the role of institutions as operatives of colonialism—has often been neglected. In this thematic edition we argue that in order to fully...... understand the interconnected, global world one must explicitly dissect the colonial institution as an entwined, dual manifestation that is central to understanding both power and power relations in the modern world. Following Ann Laura Stoler, we have selected case studies from the Australia, Europe, UK...... and the USA which reveal that the study of colonial institutions should not be limited to the functional life of these institutions—or solely those that take the form of monumental architecture—but should include the long shadow of “imperial debris” (Stoler 2008) and immaterial institutions....

  17. Robust multi-scale clustering of large DNA microarray datasets with the consensus algorithm

    DEFF Research Database (Denmark)

    Grotkjær, Thomas; Winther, Ole; Regenberg, Birgitte

    2006-01-01

    Motivation: Hierarchical and relocation clustering (e.g. K-means and self-organizing maps) have been successful tools in the display and analysis of whole genome DNA microarray expression data. However, the results of hierarchical clustering are sensitive to outliers, and most relocation methods...

  18. A neural network clustering algorithm for the ATLAS silicon pixel detector

    CERN Document Server

    Aad, Georges; Abdallah, Jalal; Abdel Khalek, Samah; Abdinov, Ovsat; Aben, Rosemarie; Abi, Babak; Abolins, Maris; AbouZeid, Ossama; Abramowicz, Halina; Abreu, Henso; Abreu, Ricardo; Abulaiti, Yiming; Acharya, Bobby Samir; Adamczyk, Leszek; Adams, David; Adelman, Jahred; Adomeit, Stefanie; Adye, Tim; Agatonovic-Jovin, Tatjana; Aguilar-Saavedra, Juan Antonio; Agustoni, Marco; Ahlen, Steven; Ahmadov, Faig; Aielli, Giulio; Akerstedt, Henrik; Åkesson, Torsten Paul Ake; Akimoto, Ginga; Akimov, Andrei; Alberghi, Gian Luigi; Albert, Justin; Albrand, Solveig; Alconada Verzini, Maria Josefina; Aleksa, Martin; Aleksandrov, Igor; Alexa, Calin; Alexander, Gideon; Alexandre, Gauthier; Alexopoulos, Theodoros; Alhroob, Muhammad; Alimonti, Gianluca; Alio, Lion; Alison, John; Allbrooke, Benedict; Allison, Lee John; Allport, Phillip; Almond, John; Aloisio, Alberto; Alonso, Alejandro; Alonso, Francisco; Alpigiani, Cristiano; Altheimer, Andrew David; Alvarez Gonzalez, Barbara; Alviggi, Mariagrazia; Amako, Katsuya; Amaral Coutinho, Yara; Amelung, Christoph; Amidei, Dante; Amor Dos Santos, Susana Patricia; Amorim, Antonio; Amoroso, Simone; Amram, Nir; Amundsen, Glenn; Anastopoulos, Christos; Ancu, Lucian Stefan; Andari, Nansi; Andeen, Timothy; Anders, Christoph Falk; Anders, Gabriel; Anderson, Kelby; Andreazza, Attilio; Andrei, George Victor; Anduaga, Xabier; Angelidakis, Stylianos; Angelozzi, Ivan; Anger, Philipp; Angerami, Aaron; Anghinolfi, Francis; Anisenkov, Alexey; Anjos, Nuno; Annovi, Alberto; Antonaki, Ariadni; Antonelli, Mario; Antonov, Alexey; Antos, Jaroslav; Anulli, Fabio; Aoki, Masato; Aperio Bella, Ludovica; Apolle, Rudi; Arabidze, Giorgi; Aracena, Ignacio; Arai, Yasuo; Araque, Juan Pedro; Arce, Ayana; Arguin, Jean-Francois; Argyropoulos, Spyridon; Arik, Metin; Armbruster, Aaron James; Arnaez, Olivier; Arnal, Vanessa; Arnold, Hannah; Arratia, Miguel; Arslan, Ozan; Artamonov, Andrei; Artoni, Giacomo; Asai, Shoji; Asbah, Nedaa; Ashkenazi, Adi; Åsman, Barbro; Asquith, Lily; Assamagan, Ketevi; Astalos, Robert; Atkinson, Markus; Atlay, Naim Bora; Auerbach, Benjamin; Augsten, Kamil; Aurousseau, Mathieu; Avolio, Giuseppe; Azuelos, Georges; Azuma, Yuya; Baak, Max; Baas, Alessandra; Bacci, Cesare; Bachacou, Henri; Bachas, Konstantinos; Backes, Moritz; Backhaus, Malte; Backus Mayes, John; Badescu, Elisabeta; Bagiacchi, Paolo; Bagnaia, Paolo; Bai, Yu; Bain, Travis; Baines, John; Baker, Oliver Keith; Balek, Petr; Balli, Fabrice; Banas, Elzbieta; Banerjee, Swagato; Bannoura, Arwa A E; Bansal, Vikas; Bansil, Hardeep Singh; Barak, Liron; Baranov, Sergei; Barberio, Elisabetta Luigia; Barberis, Dario; Barbero, Marlon; Barillari, Teresa; Barisonzi, Marcello; Barklow, Timothy; Barlow, Nick; Barnett, Bruce; Barnett, Michael; Barnovska, Zuzana; Baroncelli, Antonio; Barone, Gaetano; Barr, Alan; Barreiro, Fernando; Barreiro Guimarães da Costa, João; Bartoldus, Rainer; Barton, Adam Edward; Bartos, Pavol; Bartsch, Valeria; Bassalat, Ahmed; Basye, Austin; Bates, Richard; Batkova, Lucia; Batley, Richard; Battaglia, Marco; Battistin, Michele; Bauer, Florian; Bawa, Harinder Singh; Beau, Tristan; Beauchemin, Pierre-Hugues; Beccherle, Roberto; Bechtle, Philip; Beck, Hans Peter; Becker, Anne Kathrin; Becker, Sebastian; Beckingham, Matthew; Becot, Cyril; Beddall, Andrew; Beddall, Ayda; Bedikian, Sourpouhi; Bednyakov, Vadim; Bee, Christopher; Beemster, Lars; Beermann, Thomas; Begel, Michael; Behr, Katharina; Belanger-Champagne, Camille; Bell, Paul; Bell, William; Bella, Gideon; Bellagamba, Lorenzo; Bellerive, Alain; Bellomo, Massimiliano; Belotskiy, Konstantin; Beltramello, Olga; Benary, Odette; Benchekroun, Driss; Bendtz, Katarina; Benekos, Nektarios; Benhammou, Yan; Benhar Noccioli, Eleonora; Benitez Garcia, Jorge-Armando; Benjamin, Douglas; Bensinger, James; Benslama, Kamal; Bentvelsen, Stan; Berge, David; Bergeaas Kuutmann, Elin; Berger, Nicolas; Berghaus, Frank; Beringer, Jürg; Bernard, Clare; Bernat, Pauline; Bernius, Catrin; Bernlochner, Florian Urs; Berry, Tracey; Berta, Peter; Bertella, Claudia; Bertoli, Gabriele; Bertolucci, Federico; Bertsche, David; Besana, Maria Ilaria; Besjes, Geert-Jan; Bessidskaia, Olga; Bessner, Martin Florian; Besson, Nathalie; Betancourt, Christopher; Bethke, Siegfried; Bhimji, Wahid; Bianchi, Riccardo-Maria; Bianchini, Louis; Bianco, Michele; Biebel, Otmar; Bieniek, Stephen Paul; Bierwagen, Katharina; Biesiada, Jed; Biglietti, Michela; Bilbao De Mendizabal, Javier; Bilokon, Halina; Bindi, Marcello; Binet, Sebastien; Bingul, Ahmet; Bini, Cesare; Black, Curtis; Black, James; Black, Kevin; Blackburn, Daniel; Blair, Robert; Blanchard, Jean-Baptiste; Blazek, Tomas; Bloch, Ingo; Blocker, Craig; Blum, Walter; Blumenschein, Ulrike; Bobbink, Gerjan; Bobrovnikov, Victor; Bocchetta, Simona Serena; Bocci, Andrea; Bock, Christopher; Boddy, Christopher Richard; Boehler, Michael; Boek, Thorsten Tobias; Bogaerts, Joannes Andreas; Bogdanchikov, Alexander; Bogouch, Andrei; Bohm, Christian; Bohm, Jan; Boisvert, Veronique; Bold, Tomasz; Boldea, Venera; Boldyrev, Alexey; Bomben, Marco; Bona, Marcella; Boonekamp, Maarten; Borisov, Anatoly; Borissov, Guennadi; Borri, Marcello; Borroni, Sara; Bortfeldt, Jonathan; Bortolotto, Valerio; Bos, Kors; Boscherini, Davide; Bosman, Martine; Boterenbrood, Hendrik; Boudreau, Joseph; Bouffard, Julian; Bouhova-Thacker, Evelina Vassileva; Boumediene, Djamel Eddine; Bourdarios, Claire; Bousson, Nicolas; Boutouil, Sara; Boveia, Antonio; Boyd, James; Boyko, Igor; Bracinik, Juraj; Brandt, Andrew; Brandt, Gerhard; Brandt, Oleg; Bratzler, Uwe; Brau, Benjamin; Brau, James; Braun, Helmut; Brazzale, Simone Federico; Brelier, Bertrand; Brendlinger, Kurt; Brennan, Amelia Jean; Brenner, Richard; Bressler, Shikma; Bristow, Kieran; Bristow, Timothy Michael; Britton, Dave; Brochu, Frederic; Brock, Ian; Brock, Raymond; Bromberg, Carl; Bronner, Johanna; Brooijmans, Gustaaf; Brooks, Timothy; Brooks, William; Brosamer, Jacquelyn; Brost, Elizabeth; Brown, Jonathan; Bruckman de Renstrom, Pawel; Bruncko, Dusan; Bruneliere, Renaud; Brunet, Sylvie; Bruni, Alessia; Bruni, Graziano; Bruschi, Marco; Bryngemark, Lene; Buanes, Trygve; Buat, Quentin; Bucci, Francesca; Buchholz, Peter; Buckingham, Ryan; Buckley, Andrew; Buda, Stelian Ioan; Budagov, Ioulian; Buehrer, Felix; Bugge, Lars; Bugge, Magnar Kopangen; Bulekov, Oleg; Bundock, Aaron Colin; Burckhart, Helfried; Burdin, Sergey; Burghgrave, Blake; Burke, Stephen; Burmeister, Ingo; Busato, Emmanuel; Büscher, Daniel; Büscher, Volker; Bussey, Peter; Buszello, Claus-Peter; Butler, Bart; Butler, John; Butt, Aatif Imtiaz; Buttar, Craig; Butterworth, Jonathan; Butti, Pierfrancesco; Buttinger, William; Buzatu, Adrian; Byszewski, Marcin; Cabrera Urbán, Susana; Caforio, Davide; Cakir, Orhan; Calafiura, Paolo; Calandri, Alessandro; Calderini, Giovanni; Calfayan, Philippe; Calkins, Robert; Caloba, Luiz; Calvet, David; Calvet, Samuel; Camacho Toro, Reina; Camarda, Stefano; Cameron, David; Caminada, Lea Michaela; Caminal Armadans, Roger; Campana, Simone; Campanelli, Mario; Campoverde, Angel; Canale, Vincenzo; Canepa, Anadi; Cano Bret, Marc; Cantero, Josu; Cantrill, Robert; Cao, Tingting; Capeans Garrido, Maria Del Mar; Caprini, Irinel; Caprini, Mihai; Capua, Marcella; Caputo, Regina; Cardarelli, Roberto; Carli, Tancredi; Carlino, Gianpaolo; Carminati, Leonardo; Caron, Sascha; Carquin, Edson; Carrillo-Montoya, German D; Carter, Janet; Carvalho, João; Casadei, Diego; Casado, Maria Pilar; Casolino, Mirkoantonio; Castaneda-Miranda, Elizabeth; Castelli, Angelantonio; Castillo Gimenez, Victoria; Castro, Nuno Filipe; Catastini, Pierluigi; Catinaccio, Andrea; Catmore, James; Cattai, Ariella; Cattani, Giordano; Caughron, Seth; Cavaliere, Viviana; Cavalli, Donatella; Cavalli-Sforza, Matteo; Cavasinni, Vincenzo; Ceradini, Filippo; Cerio, Benjamin; Cerny, Karel; Santiago Cerqueira, Augusto; Cerri, Alessandro; Cerrito, Lucio; Cerutti, Fabio; Cerv, Matevz; Cervelli, Alberto; Cetin, Serkant Ali; Chafaq, Aziz; Chakraborty, Dhiman; Chalupkova, Ina; Chang, Philip; Chapleau, Bertrand; Chapman, John Derek; Charfeddine, Driss; 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Debbe, Ramiro; Debenedetti, Chiara; Dechenaux, Benjamin; Dedovich, Dmitri; Deigaard, Ingrid; Del Peso, Jose; Del Prete, Tarcisio; Deliot, Frederic; Delitzsch, Chris Malena; Deliyergiyev, Maksym; Dell'Acqua, Andrea; Dell'Asta, Lidia; Dell'Orso, Mauro; Della Pietra, Massimo; della Volpe, Domenico; Delmastro, Marco; Delsart, Pierre-Antoine; Deluca, Carolina; Demers, Sarah; Demichev, Mikhail; Demilly, Aurelien; Denisov, Sergey; Derendarz, Dominik; Derkaoui, Jamal Eddine; Derue, Frederic; Dervan, Paul; Desch, Klaus Kurt; Deterre, Cecile; Deviveiros, Pier-Olivier; Dewhurst, Alastair; Dhaliwal, Saminder; Di Ciaccio, Anna; Di Ciaccio, Lucia; Di Domenico, Antonio; Di Donato, Camilla; Di Girolamo, Alessandro; Di Girolamo, Beniamino; Di Mattia, Alessandro; Di Micco, Biagio; Di Nardo, Roberto; Di Simone, Andrea; Di Sipio, Riccardo; Di Valentino, David; Dias, Flavia; Diaz, Marco Aurelio; Diehl, Edward; Dietrich, Janet; Dietzsch, Thorsten; Diglio, Sara; Dimitrievska, Aleksandra; Dingfelder, Jochen; 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Giangiobbe, Vincent; Giannetti, Paola; Gianotti, Fabiola; Gibbard, Bruce; Gibson, Stephen; Gilchriese, Murdock; Gillam, Thomas; Gillberg, Dag; Gilles, Geoffrey; Gingrich, Douglas; Giokaris, Nikos; Giordani, MarioPaolo; Giordano, Raffaele; Giorgi, Filippo Maria; Giorgi, Francesco Michelangelo; Giraud, Pierre-Francois; Giugni, Danilo; Giuliani, Claudia; Giulini, Maddalena; Gjelsten, Børge Kile; Gkaitatzis, Stamatios; Gkialas, Ioannis; Gladilin, Leonid; Glasman, Claudia; Glatzer, Julian; Glaysher, Paul; Glazov, Alexandre; Glonti, George; Goblirsch-Kolb, Maximilian; Goddard, Jack Robert; Godfrey, Jennifer; Godlewski, Jan; Goeringer, Christian; Goldfarb, Steven; Golling, Tobias; Golubkov, Dmitry; Gomes, Agostinho; Gomez Fajardo, Luz Stella; Gonçalo, Ricardo; Goncalves Pinto Firmino Da Costa, Joao; Gonella, Laura; González de la Hoz, Santiago; Gonzalez Parra, Garoe; Gonzalez-Sevilla, Sergio; Goossens, Luc; Gorbounov, Petr Andreevich; Gordon, Howard; Gorelov, Igor; Gorini, Benedetto; Gorini, Edoardo; Gorišek, Andrej; Gornicki, Edward; Goshaw, Alfred; Gössling, Claus; Gostkin, Mikhail Ivanovitch; Gouighri, Mohamed; Goujdami, Driss; Goulette, Marc Phillippe; Goussiou, Anna; Goy, Corinne; Gozpinar, Serdar; Grabas, Herve Marie Xavier; Graber, Lars; Grabowska-Bold, Iwona; Grafström, Per; Grahn, Karl-Johan; Gramling, Johanna; Gramstad, Eirik; Grancagnolo, Sergio; Grassi, Valerio; Gratchev, Vadim; Gray, Heather; Graziani, Enrico; Grebenyuk, Oleg; Greenwood, Zeno Dixon; Gregersen, Kristian; Gregor, Ingrid-Maria; Grenier, Philippe; Griffiths, Justin; Grillo, Alexander; Grimm, Kathryn; Grinstein, Sebastian; Gris, Philippe Luc Yves; Grishkevich, Yaroslav; Grivaz, Jean-Francois; Grohs, Johannes Philipp; Grohsjean, Alexander; Gross, Eilam; Grosse-Knetter, Joern; Grossi, Giulio Cornelio; Groth-Jensen, Jacob; Grout, Zara Jane; Guan, Liang; Guescini, Francesco; Guest, Daniel; Gueta, Orel; Guicheney, Christophe; Guido, Elisa; Guillemin, Thibault; Guindon, Stefan; Gul, Umar; Gumpert, Christian; Gunther, Jaroslav; Guo, Jun; Gupta, Shaun; Gutierrez, Phillip; Gutierrez Ortiz, Nicolas Gilberto; Gutschow, Christian; Guttman, Nir; Guyot, Claude; Gwenlan, Claire; Gwilliam, Carl; Haas, Andy; Haber, Carl; Hadavand, Haleh Khani; Haddad, Nacim; Haefner, Petra; Hageböck, Stephan; Hajduk, Zbigniew; Hakobyan, Hrachya; Haleem, Mahsana; Hall, David; Halladjian, Garabed; Hamacher, Klaus; Hamal, Petr; Hamano, Kenji; Hamer, Matthias; Hamilton, Andrew; Hamilton, Samuel; Hamnett, Phillip George; Han, Liang; Hanagaki, Kazunori; Hanawa, Keita; Hance, Michael; Hanke, Paul; Hanna, Remie; Hansen, Jørgen Beck; Hansen, Jorn Dines; Hansen, Peter Henrik; Hara, Kazuhiko; Hard, Andrew; Harenberg, Torsten; Hariri, Faten; Harkusha, Siarhei; Harper, Devin; Harrington, Robert; Harris, Orin; Harrison, Paul Fraser; Hartjes, Fred; Hasegawa, Satoshi; Hasegawa, Yoji; Hasib, A; Hassani, Samira; Haug, Sigve; Hauschild, Michael; Hauser, Reiner; Havranek, Miroslav; Hawkes, Christopher; Hawkings, Richard John; Hawkins, Anthony David; Hayashi, Takayasu; Hayden, Daniel; Hays, Chris; Hayward, Helen; Haywood, Stephen; Head, Simon; Heck, Tobias; Hedberg, Vincent; Heelan, Louise; Heim, Sarah; Heim, Timon; Heinemann, Beate; Heinrich, Lukas; Hejbal, Jiri; Helary, Louis; Heller, Claudio; Heller, Matthieu; Hellman, Sten; Hellmich, Dennis; Helsens, Clement; Henderson, James; Henderson, Robert; Heng, Yang; Hengler, Christopher; Henrichs, Anna; Henriques Correia, Ana Maria; Henrot-Versille, Sophie; Hensel, Carsten; Herbert, Geoffrey Henry; Hernández Jiménez, Yesenia; Herrberg-Schubert, Ruth; Herten, Gregor; Hertenberger, Ralf; Hervas, Luis; Hesketh, Gavin Grant; Hessey, Nigel; Hickling, Robert; Higón-Rodriguez, Emilio; Hill, Ewan; Hill, John; Hiller, Karl Heinz; Hillert, Sonja; Hillier, Stephen; Hinchliffe, Ian; Hines, Elizabeth; Hirose, Minoru; Hirschbuehl, Dominic; Hobbs, John; Hod, Noam; Hodgkinson, Mark; Hodgson, Paul; Hoecker, Andreas; Hoeferkamp, Martin; Hoffman, Julia; Hoffmann, Dirk; Hofmann, Julia Isabell; Hohlfeld, Marc; Holmes, Tova Ray; Hong, Tae Min; Hooft van Huysduynen, Loek; Hostachy, Jean-Yves; Hou, Suen; Hoummada, Abdeslam; Howard, Jacob; Howarth, James; Hrabovsky, Miroslav; Hristova, Ivana; Hrivnac, Julius; Hryn'ova, Tetiana; Hsu, Catherine; Hsu, Pai-hsien Jennifer; Hsu, Shih-Chieh; Hu, Diedi; Hu, Xueye; Huang, Yanping; Hubacek, Zdenek; Hubaut, Fabrice; Huegging, Fabian; Huffman, Todd Brian; Hughes, Emlyn; Hughes, Gareth; Huhtinen, Mika; Hülsing, Tobias Alexander; Hurwitz, Martina; Huseynov, Nazim; Huston, Joey; Huth, John; Iacobucci, Giuseppe; Iakovidis, Georgios; Ibragimov, Iskander; Iconomidou-Fayard, Lydia; Ideal, Emma; Iengo, Paolo; Igonkina, Olga; Iizawa, Tomoya; Ikegami, Yoichi; Ikematsu, Katsumasa; Ikeno, Masahiro; Ilchenko, Iurii; Iliadis, Dimitrios; Ilic, Nikolina; Inamaru, Yuki; Ince, Tayfun; Ioannou, Pavlos; Iodice, Mauro; Iordanidou, Kalliopi; Ippolito, Valerio; Irles Quiles, Adrian; Isaksson, Charlie; Ishino, Masaya; Ishitsuka, Masaki; Ishmukhametov, Renat; Issever, Cigdem; Istin, Serhat; Iturbe Ponce, Julia Mariana; Iuppa, Roberto; Ivarsson, Jenny; Iwanski, Wieslaw; Iwasaki, Hiroyuki; Izen, Joseph; Izzo, Vincenzo; Jackson, Brett; Jackson, Matthew; Jackson, Paul; Jaekel, Martin; Jain, Vivek; Jakobs, Karl; Jakobsen, Sune; Jakoubek, Tomas; Jakubek, Jan; Jamin, David Olivier; Jana, Dilip; Jansen, Eric; Jansen, Hendrik; Janssen, Jens; Janus, Michel; Jarlskog, Göran; Javadov, Namig; Javůrek, Tomáš; Jeanty, Laura; Jejelava, Juansher; Jeng, Geng-yuan; Jennens, David; Jenni, Peter; Jentzsch, Jennifer; Jeske, Carl; Jézéquel, Stéphane; Ji, Haoshuang; Ji, Weina; Jia, Jiangyong; Jiang, Yi; Jimenez Belenguer, Marcos; Jin, Shan; Jinaru, Adam; Jinnouchi, Osamu; Joergensen, Morten Dam; Johansson, Erik; Johansson, Per; Johns, Kenneth; Jon-And, Kerstin; Jones, Graham; Jones, Roger; Jones, Tim; Jongmanns, Jan; Jorge, Pedro; Joshi, Kiran Daniel; Jovicevic, Jelena; Ju, Xiangyang; Jung, Christian; Jungst, Ralph Markus; Jussel, Patrick; Juste Rozas, Aurelio; Kaci, Mohammed; Kaczmarska, Anna; Kado, Marumi; Kagan, Harris; Kagan, Michael; Kajomovitz, Enrique; Kalderon, Charles William; Kama, Sami; Kamenshchikov, Andrey; Kanaya, Naoko; Kaneda, Michiru; Kaneti, Steven; Kantserov, Vadim; Kanzaki, Junichi; Kaplan, Benjamin; Kapliy, Anton; Kar, Deepak; Karakostas, Konstantinos; Karastathis, Nikolaos; Karnevskiy, Mikhail; Karpov, Sergey; Karpova, Zoya; Karthik, Krishnaiyengar; Kartvelishvili, Vakhtang; Karyukhin, Andrey; Kashif, Lashkar; Kasieczka, Gregor; Kass, Richard; Kastanas, Alex; Kataoka, Yousuke; Katre, Akshay; Katzy, Judith; Kaushik, Venkatesh; Kawagoe, Kiyotomo; Kawamoto, Tatsuo; Kawamura, Gen; Kazama, Shingo; Kazanin, Vassili; Kazarinov, Makhail; Keeler, Richard; Kehoe, Robert; Keil, Markus; Keller, John; Kempster, Jacob Julian; Keoshkerian, Houry; Kepka, Oldrich; Kerševan, Borut Paul; Kersten, Susanne; Kessoku, Kohei; Keung, Justin; Khalil-zada, Farkhad; Khandanyan, Hovhannes; Khanov, Alexander; Khodinov, Alexander; Khomich, Andrei; Khoo, Teng Jian; Khoriauli, Gia; Khoroshilov, Andrey; Khovanskiy, Valery; Khramov, Evgeniy; Khubua, Jemal; Kim, Hee Yeun; Kim, Hyeon Jin; Kim, Shinhong; Kimura, Naoki; Kind, Oliver; King, Barry; King, Matthew; King, Robert Steven Beaufoy; King, Samuel Burton; Kirk, Julie; Kiryunin, Andrey; Kishimoto, Tomoe; Kisielewska, Danuta; Kiss, Florian; Kittelmann, Thomas; Kiuchi, Kenji; Kladiva, Eduard; Klein, Max; Klein, Uta; Kleinknecht, Konrad; Klimek, Pawel; Klimentov, Alexei; Klingenberg, Reiner; Klinger, Joel Alexander; Klioutchnikova, Tatiana; Klok, Peter; Kluge, Eike-Erik; Kluit, Peter; Kluth, Stefan; Kneringer, Emmerich; Knoops, Edith; Knue, Andrea; Kobayashi, Dai; Kobayashi, Tomio; Kobel, Michael; Kocian, Martin; Kodys, Peter; Koevesarki, Peter; Koffas, Thomas; Koffeman, Els; Kogan, Lucy Anne; Kohlmann, Simon; Kohout, Zdenek; Kohriki, Takashi; Koi, Tatsumi; Kolanoski, Hermann; Koletsou, Iro; Koll, James; Komar, Aston; Komori, Yuto; Kondo, Takahiko; Kondrashova, Nataliia; Köneke, Karsten; König, Adriaan; König, Sebastian; Kono, Takanori; Konoplich, Rostislav; Konstantinidis, Nikolaos; Kopeliansky, Revital; Koperny, Stefan; Köpke, Lutz; Kopp, Anna Katharina; Korcyl, Krzysztof; Kordas, Kostantinos; Korn, Andreas; Korol, Aleksandr; Korolkov, Ilya; Korolkova, Elena; Korotkov, Vladislav; Kortner, Oliver; Kortner, Sandra; Kostyukhin, Vadim; Kotov, Vladislav; Kotwal, Ashutosh; Kourkoumelis, Christine; Kouskoura, Vasiliki; Koutsman, Alex; Kowalewski, Robert Victor; Kowalski, Tadeusz; Kozanecki, Witold; Kozhin, Anatoly; Kral, Vlastimil; Kramarenko, Viktor; Kramberger, Gregor; Krasnopevtsev, Dimitriy; Krasny, Mieczyslaw Witold; Krasznahorkay, Attila; Kraus, Jana; Kravchenko, Anton; Kreiss, Sven; Kretz, Moritz; Kretzschmar, Jan; Kreutzfeldt, Kristof; Krieger, Peter; Kroeninger, Kevin; Kroha, Hubert; Kroll, Joe; Kroseberg, Juergen; Krstic, Jelena; Kruchonak, Uladzimir; Krüger, Hans; Kruker, Tobias; Krumnack, Nils; Krumshteyn, Zinovii; Kruse, Amanda; Kruse, Mark; Kruskal, Michael; Kubota, Takashi; Kuday, Sinan; Kuehn, Susanne; Kugel, Andreas; Kuhl, Andrew; Kuhl, Thorsten; Kukhtin, Victor; Kulchitsky, Yuri; Kuleshov, Sergey; Kuna, Marine; Kunkle, Joshua; Kupco, Alexander; Kurashige, Hisaya; Kurochkin, Yurii; Kurumida, Rie; Kus, Vlastimil; Kuwertz, Emma Sian; Kuze, Masahiro; Kvita, Jiri; La Rosa, Alessandro; La Rotonda, Laura; Lacasta, Carlos; Lacava, Francesco; Lacey, James; Lacker, Heiko; Lacour, Didier; Lacuesta, Vicente Ramón; Ladygin, Evgueni; Lafaye, Remi; Laforge, Bertrand; Lagouri, Theodota; Lai, Stanley; Laier, Heiko; Lambourne, Luke; Lammers, Sabine; Lampen, Caleb; Lampl, Walter; Lançon, Eric; Landgraf, Ulrich; Landon, Murrough; Lang, Valerie Susanne; Lankford, Andrew; Lanni, Francesco; Lantzsch, Kerstin; Laplace, Sandrine; Lapoire, Cecile; Laporte, Jean-Francois; Lari, Tommaso; Lassnig, Mario; Laurelli, Paolo; Lavrijsen, Wim; Law, Alexander; Laycock, Paul; Le, Bao Tran; Le Dortz, Olivier; Le Guirriec, Emmanuel; Le Menedeu, Eve; LeCompte, Thomas; Ledroit-Guillon, Fabienne Agnes Marie; Lee, Claire Alexandra; Lee, Hurng-Chun; Lee, Jason; Lee, Shih-Chang; Lee, Lawrence; Lefebvre, Guillaume; Lefebvre, Michel; Legger, Federica; Leggett, Charles; Lehan, Allan; Lehmacher, Marc; Lehmann Miotto, Giovanna; Lei, Xiaowen; Leight, William Axel; Leisos, Antonios; Leister, Andrew Gerard; Leite, Marco Aurelio Lisboa; Leitner, Rupert; Lellouch, Daniel; Lemmer, Boris; Leney, Katharine; Lenz, Tatjana; Lenzen, Georg; Lenzi, Bruno; Leone, Robert; Leone, Sandra; Leonhardt, Kathrin; Leonidopoulos, Christos; Leontsinis, Stefanos; Leroy, Claude; Lester, Christopher; Lester, Christopher Michael; Levchenko, Mikhail; Levêque, Jessica; Levin, Daniel; Levinson, Lorne; Levy, Mark; Lewis, Adrian; Lewis, George; Leyko, Agnieszka; Leyton, Michael; Li, Bing; Li, Bo; Li, Haifeng; Li, Ho Ling; Li, Lei; Li, Liang; Li, Shu; Li, Yichen; Liang, Zhijun; Liao, Hongbo; Liberti, Barbara; Lichard, Peter; Lie, Ki; Liebal, Jessica; Liebig, Wolfgang; Limbach, Christian; Limosani, Antonio; Lin, Simon; Lin, Tai-Hua; Linde, Frank; Lindquist, Brian Edward; Linnemann, James; Lipeles, Elliot; Lipniacka, Anna; Lisovyi, Mykhailo; Liss, Tony; Lissauer, David; Lister, Alison; Litke, Alan; Liu, Bo; Liu, Dong; Liu, Jianbei; Liu, Kun; Liu, Lulu; Liu, Miaoyuan; Liu, Minghui; Liu, Yanwen; Livan, Michele; Livermore, Sarah; Lleres, Annick; Llorente Merino, Javier; Lloyd, Stephen; Lo Sterzo, Francesco; Lobodzinska, Ewelina; Loch, Peter; Lockman, William; Loddenkoetter, Thomas; Loebinger, Fred; Loevschall-Jensen, Ask Emil; Loginov, Andrey; Loh, Chang Wei; Lohse, Thomas; Lohwasser, Kristin; Lokajicek, Milos; Lombardo, Vincenzo Paolo; Long, Brian Alexander; Long, Jonathan; Long, Robin Eamonn; Lopes, Lourenco; Lopez Mateos, David; Lopez Paredes, Brais; Lopez Paz, Ivan; Lorenz, Jeanette; Lorenzo Martinez, Narei; Losada, Marta; Loscutoff, Peter; Lou, XinChou; Lounis, Abdenour; Love, Jeremy; Love, Peter; Lowe, Andrew; Lu, Feng; Lubatti, Henry; Luci, Claudio; Lucotte, Arnaud; Luehring, Frederick; Lukas, Wolfgang; Luminari, Lamberto; Lundberg, Olof; Lund-Jensen, Bengt; Lungwitz, Matthias; Lynn, David; Lysak, Roman; Lytken, Else; Ma, Hong; Ma, Lian Liang; Maccarrone, Giovanni; Macchiolo, Anna; Machado Miguens, Joana; Macina, Daniela; Madaffari, Daniele; Madar, Romain; Maddocks, Harvey Jonathan; Mader, Wolfgang; Madsen, Alexander; Maeno, Mayuko; Maeno, Tadashi; Magradze, Erekle; Mahboubi, Kambiz; Mahlstedt, Joern; Mahmoud, Sara; Maiani, Camilla; Maidantchik, Carmen; Maier, Andreas Alexander; Maio, Amélia; Majewski, Stephanie; Makida, Yasuhiro; Makovec, Nikola; Mal, Prolay; Malaescu, Bogdan; Malecki, Pawel; Maleev, Victor; Malek, Fairouz; Mallik, Usha; Malon, David; Malone, Caitlin; Maltezos, Stavros; Malyshev, Vladimir; Malyukov, Sergei; Mamuzic, Judita; Mandelli, Beatrice; Mandelli, Luciano; Mandić, Igor; Mandrysch, Rocco; Maneira, José; Manfredini, Alessandro; Manhaes de Andrade Filho, Luciano; Manjarres Ramos, Joany Andreina; Mann, Alexander; Manning, Peter; Manousakis-Katsikakis, Arkadios; Mansoulie, Bruno; Mantifel, Rodger; Mapelli, Livio; March, Luis; Marchand, Jean-Francois; Marchiori, Giovanni; Marcisovsky, Michal; Marino, Christopher; Marjanovic, Marija; Marques, Carlos; Marroquim, Fernando; Marsden, Stephen Philip; Marshall, Zach; Marti, Lukas Fritz; Marti-Garcia, Salvador; Martin, Brian; Martin, Brian Thomas; Martin, Tim; Martin, Victoria Jane; Martin dit Latour, Bertrand; Martinez, Homero; Martinez, Mario; Martin-Haugh, Stewart; Martyniuk, Alex; Marx, Marilyn; Marzano, Francesco; Marzin, Antoine; Masetti, Lucia; Mashimo, Tetsuro; Mashinistov, Ruslan; Masik, Jiri; Maslennikov, Alexey; Massa, Ignazio; Massol, Nicolas; Mastrandrea, Paolo; Mastroberardino, Anna; Masubuchi, Tatsuya; Mättig, Peter; Mattmann, Johannes; Maurer, Julien; Maxfield, Stephen; Maximov, Dmitriy; Mazini, Rachid; Mazzaferro, Luca; Mc Goldrick, Garrin; Mc Kee, Shawn Patrick; McCarn, Allison; McCarthy, Robert; McCarthy, Tom; McCubbin, Norman; McFarlane, Kenneth; Mcfayden, Josh; Mchedlidze, Gvantsa; McMahon, Steve; McPherson, Robert; Meade, Andrew; Mechnich, Joerg; Medinnis, Michael; Meehan, Samuel; Mehlhase, Sascha; Mehta, Andrew; Meier, Karlheinz; Meineck, Christian; Meirose, Bernhard; Melachrinos, Constantinos; Mellado Garcia, Bruce Rafael; Meloni, Federico; Mengarelli, Alberto; Menke, Sven; Meoni, Evelin; Mercurio, Kevin Michael; Mergelmeyer, Sebastian; Meric, Nicolas; Mermod, Philippe; Merola, Leonardo; Meroni, Chiara; Merritt, Frank; Merritt, Hayes; Messina, Andrea; Metcalfe, Jessica; Mete, Alaettin Serhan; Meyer, Carsten; Meyer, Christopher; Meyer, Jean-Pierre; Meyer, Jochen; Middleton, Robin; Migas, Sylwia; Mijović, Liza; Mikenberg, Giora; Mikestikova, Marcela; Mikuž, Marko; Milic, Adriana; Miller, David; Mills, Corrinne; Milov, Alexander; Milstead, David; Milstein, Dmitry; Minaenko, Andrey; Minashvili, Irakli; Mincer, Allen; Mindur, Bartosz; Mineev, Mikhail; Ming, Yao; Mir, Lluisa-Maria; Mirabelli, Giovanni; Mitani, Takashi; Mitrevski, Jovan; Mitsou, Vasiliki A; Mitsui, Shingo; Miucci, Antonio; Miyagawa, Paul; Mjörnmark, Jan-Ulf; Moa, Torbjoern; Mochizuki, Kazuya; Mohapatra, Soumya; Mohr, Wolfgang; Molander, Simon; Moles-Valls, Regina; Mönig, Klaus; Monini, Caterina; Monk, James; Monnier, Emmanuel; Montejo Berlingen, Javier; Monticelli, Fernando; Monzani, Simone; Moore, Roger; Moraes, Arthur; Morange, Nicolas; Moreno, Deywis; Moreno Llácer, María; Morettini, Paolo; Morgenstern, Marcus; Morii, Masahiro; Moritz, Sebastian; Morley, Anthony Keith; Mornacchi, Giuseppe; Morris, John; Morvaj, Ljiljana; Moser, Hans-Guenther; Mosidze, Maia; Moss, Josh; Motohashi, Kazuki; Mount, Richard; Mountricha, Eleni; Mouraviev, Sergei; Moyse, Edward; Muanza, Steve; Mudd, Richard; Mueller, Felix; Mueller, James; Mueller, Klemens; Mueller, Thibaut; Mueller, Timo; Muenstermann, Daniel; Munwes, Yonathan; Murillo Quijada, Javier Alberto; Murray, Bill; Musheghyan, Haykuhi; Musto, Elisa; Myagkov, Alexey; Myska, Miroslav; Nackenhorst, Olaf; Nadal, Jordi; Nagai, Koichi; Nagai, Ryo; Nagai, Yoshikazu; Nagano, Kunihiro; Nagarkar, Advait; Nagasaka, Yasushi; Nagel, Martin; Nairz, Armin Michael; Nakahama, Yu; Nakamura, Koji; Nakamura, Tomoaki; Nakano, Itsuo; Namasivayam, Harisankar; Nanava, Gizo; Narayan, Rohin; Nattermann, Till; Naumann, Thomas; Navarro, Gabriela; Nayyar, Ruchika; Neal, Homer; Nechaeva, Polina; Neep, Thomas James; Nef, Pascal Daniel; Negri, Andrea; Negri, Guido; Negrini, Matteo; Nektarijevic, Snezana; Nelson, Andrew; Nelson, Timothy Knight; Nemecek, Stanislav; Nemethy, Peter; Nepomuceno, Andre Asevedo; Nessi, Marzio; Neubauer, Mark; Neumann, Manuel; Neves, Ricardo; Nevski, Pavel; Newman, Paul; Nguyen, Duong Hai; Nickerson, Richard; Nicolaidou, Rosy; Nicquevert, Bertrand; Nielsen, Jason; Nikiforou, Nikiforos; Nikiforov, Andriy; Nikolaenko, Vladimir; Nikolic-Audit, Irena; Nikolics, Katalin; Nikolopoulos, Konstantinos; Nilsson, Paul; Ninomiya, Yoichi; Nisati, Aleandro; Nisius, Richard; Nobe, Takuya; Nodulman, Lawrence; Nomachi, Masaharu; Nomidis, Ioannis; Norberg, Scarlet; Nordberg, Markus; Novgorodova, Olga; Nowak, Sebastian; Nozaki, Mitsuaki; Nozka, Libor; Ntekas, Konstantinos; Nunes Hanninger, Guilherme; Nunnemann, Thomas; Nurse, Emily; Nuti, Francesco; O'Brien, Brendan Joseph; O'grady, Fionnbarr; O'Neil, Dugan; O'Shea, Val; Oakham, Gerald; Oberlack, Horst; Obermann, Theresa; Ocariz, Jose; Ochi, Atsuhiko; Ochoa, Ines; Oda, Susumu; Odaka, Shigeru; Ogren, Harold; Oh, Alexander; Oh, Seog; Ohm, Christian; Ohman, Henrik; Ohshima, Takayoshi; Okamura, Wataru; Okawa, Hideki; Okumura, Yasuyuki; Okuyama, Toyonobu; Olariu, Albert; Olchevski, Alexander; Olivares Pino, Sebastian Andres; Oliveira Damazio, Denis; Oliver Garcia, Elena; Olszewski, Andrzej; Olszowska, Jolanta; Onofre, António; Onyisi, Peter; Oram, Christopher; Oreglia, Mark; Oren, Yona; Orestano, Domizia; Orlando, Nicola; Oropeza Barrera, Cristina; Orr, Robert; Osculati, Bianca; Ospanov, Rustem; Otero y Garzon, Gustavo; Otono, Hidetoshi; Ouchrif, Mohamed; Ouellette, Eric; Ould-Saada, Farid; Ouraou, Ahmimed; Oussoren, Koen Pieter; Ouyang, Qun; Ovcharova, Ana; Owen, Mark; Ozcan, Veysi Erkcan; Ozturk, Nurcan; Pachal, Katherine; Pacheco Pages, Andres; Padilla Aranda, Cristobal; Pagáčová, Martina; Pagan Griso, Simone; Paganis, Efstathios; Pahl, Christoph; Paige, Frank; Pais, Preema; Pajchel, Katarina; Palacino, Gabriel; Palestini, Sandro; Palka, Marek; Pallin, Dominique; Palma, Alberto; Palmer, Jody; Pan, Yibin; Panagiotopoulou, Evgenia; Panduro Vazquez, William; Pani, Priscilla; Panikashvili, Natalia; Panitkin, Sergey; Pantea, Dan; Paolozzi, Lorenzo; Papadopoulou, Theodora; Papageorgiou, Konstantinos; Paramonov, Alexander; Paredes Hernandez, Daniela; Parker, Michael Andrew; Parodi, Fabrizio; Parsons, John; Parzefall, Ulrich; Pasqualucci, Enrico; Passaggio, Stefano; Passeri, Antonio; Pastore, Fernanda; Pastore, Francesca; Pásztor, Gabriella; Pataraia, Sophio; Patel, Nikhul; Pater, Joleen; Patricelli, Sergio; Pauly, Thilo; Pearce, James; Pedersen, Maiken; Pedraza Lopez, Sebastian; Pedro, Rute; Peleganchuk, Sergey; Pelikan, Daniel; Peng, Haiping; Penning, Bjoern; Penwell, John; Perepelitsa, Dennis; Perez Codina, Estel; Pérez García-Estañ, María Teresa; Perez Reale, Valeria; Perini, Laura; Pernegger, Heinz; Perrino, Roberto; Peschke, Richard; Peshekhonov, Vladimir; Peters, Krisztian; Peters, Yvonne; Petersen, Brian; Petersen, Troels; Petit, Elisabeth; Petridis, Andreas; Petridou, Chariclia; Petrolo, Emilio; Petrucci, Fabrizio; Pettersson, Nora Emilia; Pezoa, Raquel; Phillips, Peter William; Piacquadio, Giacinto; Pianori, Elisabetta; Picazio, Attilio; Piccaro, Elisa; Piccinini, Maurizio; Piegaia, Ricardo; Pignotti, David; Pilcher, James; Pilkington, Andrew; Pina, João Antonio; Pinamonti, Michele; Pinder, Alex; Pinfold, James; Pingel, Almut; Pinto, Belmiro; Pires, Sylvestre; Pitt, Michael; Pizio, Caterina; Plazak, Lukas; Pleier, Marc-Andre; Pleskot, Vojtech; Plotnikova, Elena; Plucinski, Pawel; Poddar, Sahill; Podlyski, Fabrice; Poettgen, Ruth; Poggioli, Luc; Pohl, David-leon; Pohl, Martin; Polesello, Giacomo; Policicchio, Antonio; Polifka, Richard; Polini, Alessandro; Pollard, Christopher Samuel; Polychronakos, Venetios; Pommès, Kathy; Pontecorvo, Ludovico; Pope, Bernard; Popeneciu, Gabriel Alexandru; Popovic, Dragan; Poppleton, Alan; Portell Bueso, Xavier; Pospisil, Stanislav; Potamianos, Karolos; Potrap, Igor; Potter, Christina; Potter, Christopher; Poulard, Gilbert; Poveda, Joaquin; Pozdnyakov, Valery; Pralavorio, Pascal; Pranko, Aliaksandr; Prasad, Srivas; Pravahan, Rishiraj; Prell, Soeren; Price, Darren; Price, Joe; Price, Lawrence; Prieur, Damien; Primavera, Margherita; Proissl, Manuel; Prokofiev, Kirill; Prokoshin, Fedor; Protopapadaki, Eftychia-sofia; Protopopescu, Serban; Proudfoot, James; Przybycien, Mariusz; Przysiezniak, Helenka; Ptacek, Elizabeth; Puddu, Daniele; Pueschel, Elisa; Puldon, David; Purohit, Milind; Puzo, Patrick; Qian, Jianming; Qin, Gang; Qin, Yang; Quadt, Arnulf; Quarrie, David; Quayle, William; Queitsch-Maitland, Michaela; Quilty, Donnchadha; Qureshi, Anum; Radeka, Veljko; Radescu, Voica; Radhakrishnan, Sooraj Krishnan; Radloff, Peter; Rados, Pere; Ragusa, Francesco; Rahal, Ghita; Rajagopalan, Srinivasan; Rammensee, Michael; Randle-Conde, Aidan Sean; Rangel-Smith, Camila; Rao, Kanury; Rauscher, Felix; Rave, Tobias Christian; Ravenscroft, Thomas; Raymond, Michel; Read, Alexander Lincoln; Readioff, Nathan Peter; Rebuzzi, Daniela; Redelbach, Andreas; Redlinger, George; Reece, Ryan; Reeves, Kendall; Rehnisch, Laura; Reisin, Hernan; Relich, Matthew; Rembser, Christoph; Ren, Huan; Ren, Zhongliang; Renaud, Adrien; Rescigno, Marco; Resconi, Silvia; Rezanova, Olga; Reznicek, Pavel; Rezvani, Reyhaneh; Richter, Robert; Ridel, Melissa; Rieck, Patrick; Rieger, Julia; Rijssenbeek, Michael; Rimoldi, Adele; Rinaldi, Lorenzo; Ritsch, Elmar; Riu, Imma; Rizatdinova, Flera; Rizvi, Eram; Robertson, Steven; Robichaud-Veronneau, Andree; Robinson, Dave; Robinson, James; Robson, Aidan; Roda, Chiara; Rodrigues, Luis; Roe, Shaun; Røhne, Ole; Rolli, Simona; Romaniouk, Anatoli; Romano, Marino; Romero Adam, Elena; Rompotis, Nikolaos; Roos, Lydia; Ros, Eduardo; Rosati, Stefano; Rosbach, Kilian; 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