Toxoplasma gondii antibodies in wild rodents and marsupials from the Atlantic Forest, state of São Paulo, Brazil

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Solange Maria Gennari

Full Text Available Toxoplasma gondii is a protozoan parasite that infects a large spectrum of warm-blooded animals, including humans. Small rodents and marsupials play an important role in the epidemiology of T. gondii because they are sources of infection for domestic and feral cats. Serum samples from 151 rodents and 48 marsupials, captured in the Atlantic Forest, São Paulo State, southeastern Brazil, were analyzed for the presence of T. gondii antibodies. Antibodies detected by the modified agglutination test (MAT ≥ 25 were found in 8.6% (13/151 of the rodents and 10.4% (5/48 of the marsupials, with titers ranging from 25 to 6400 and from 25 to 3200, respectively for the rodents and marsupials. Three of the eight species of rodents (Akodon spp., Oligoryzomys nigripesand Rattus norvegicus, and one from the four marsupial species (Didelphis aurita presented positive animals. T. gondii was described for the first time in the rodent Oligoryzomys nigripes.

Population dynamics of the epiphytic bromeliad Tillandsia butzii in cloud forest

Science.gov (United States)

Toledo-Aceves, Tarin; Hernández-Apolinar, Mariana

2016-02-01

Epiphytes are a major component of tropical montane cloud forests. Over-exploitation and forest loss and degradation affect remnant populations. In this study, we analysed the population dynamics of the epiphytic bromeliad Tillandsia butzii over a 2-y period in a tropical montane cloud forest fragment in southern Mexico. Matrix analysis revealed that the T. butzii population is likely to be stable at the study site. On average the λ value did not differ significantly from unity: λ (95% confidence interval) = 0.978 (0.936-1.001). λ was highly influenced by stasis, to a lesser extent by growth and only slightly by fecundity. Overall, adult plant stasis and phalanx growth habit played a fundamental role in population maintenance. T. butzii tolerance to xeric conditions may contribute to population stability in the studied region.

Acceleration and novelty: community restoration speeds recovery and transforms species composition in Andean cloud forest.

Science.gov (United States)

Wilson, Sarah Jane; Rhemtulla, Jeanine M

2016-01-01

Community-based tropical forest restoration projects, often promoted as a win-win solution for local communities and the environment, have increased dramatically in number in the past decade. Many such projects are underway in Andean cloud forests, which, given their extremely high biodiversity and history of extensive clearing, are understudied. This study investigates the efficacy of community-based tree-planting projects to accelerate cloud forest recovery, as compared to unassisted natural regeneration. This study takes place in northwest Andean Ecuador, where the majority of the original, highly diverse cloud forests have been cleared, in five communities that initiated tree-planting projects to restore forests in 2003. In 2011, we identified tree species along transects in planted forests (n = 5), naturally regenerating forests (n = 5), and primary forests (n = 5). We also surveyed 120 households about their restoration methods, tree preferences, and forest uses. We found that tree diversity was higher in planted than in unplanted secondary forest, but both were less diverse than primary forests. Ordination analysis showed that all three forests had distinct species compositions, although planted forests shared more species with primary forests than did unplanted forests. Planted forests also contained more animal-dispersed species in both the planted canopy and in the unplanted, regenerating understory than unplanted forests, and contained the highest proportion of species with use value for local people. While restoring forest increased biodiversity and accelerated forest recovery, restored forests may also represent novel ecosystems that are distinct from the region's previous ecosystems and, given their usefulness to people, are likely to be more common in the future.

Introducing two Random Forest based methods for cloud detection in remote sensing images

Science.gov (United States)

Ghasemian, Nafiseh; Akhoondzadeh, Mehdi

2018-07-01

Cloud detection is a necessary phase in satellite images processing to retrieve the atmospheric and lithospheric parameters. Currently, some cloud detection methods based on Random Forest (RF) model have been proposed but they do not consider both spectral and textural characteristics of the image. Furthermore, they have not been tested in the presence of snow/ice. In this paper, we introduce two RF based algorithms, Feature Level Fusion Random Forest (FLFRF) and Decision Level Fusion Random Forest (DLFRF) to incorporate visible, infrared (IR) and thermal spectral and textural features (FLFRF) including Gray Level Co-occurrence Matrix (GLCM) and Robust Extended Local Binary Pattern (RELBP_CI) or visible, IR and thermal classifiers (DLFRF) for highly accurate cloud detection on remote sensing images. FLFRF first fuses visible, IR and thermal features. Thereafter, it uses the RF model to classify pixels to cloud, snow/ice and background or thick cloud, thin cloud and background. DLFRF considers visible, IR and thermal features (both spectral and textural) separately and inserts each set of features to RF model. Then, it holds vote matrix of each run of the model. Finally, it fuses the classifiers using the majority vote method. To demonstrate the effectiveness of the proposed algorithms, 10 Terra MODIS and 15 Landsat 8 OLI/TIRS images with different spatial resolutions are used in this paper. Quantitative analyses are based on manually selected ground truth data. Results show that after adding RELBP_CI to input feature set cloud detection accuracy improves. Also, the average cloud kappa values of FLFRF and DLFRF on MODIS images (1 and 0.99) are higher than other machine learning methods, Linear Discriminate Analysis (LDA), Classification And Regression Tree (CART), K Nearest Neighbor (KNN) and Support Vector Machine (SVM) (0.96). The average snow/ice kappa values of FLFRF and DLFRF on MODIS images (1 and 0.85) are higher than other traditional methods. The

Vegetation-zonation patterns across a temperate mountain cloud forest ecotone are not explained by variation in hydraulic functioning or water relations.

Science.gov (United States)

Berry, Z Carter; Johnson, Daniel M; Reinhardt, Keith

2015-09-01

Many studies have demonstrated linkages between the occurrence of fog and ecophysiological functioning in cloud forests, but few have investigated hydraulic functioning as a determining factor that explains sharp changes in vegetation. The objective of this study was to compare the plant water status during cloud-immersed and non-immersed conditions and hydraulic vulnerability in branches and roots of species across a temperate, mountain fog ecotone. Because cloud forests are often dark, cool and very moist, we expected cloud forest species to have less drought-tolerant characteristics (i.e., lower Pe and P50-the pressures required to induce a 12 and 50% loss in hydraulic conductivity, respectively) relative to non-cloud forest species in adjacent (lower elevation) forests. Additionally, due to the ability of cloud forest species to absorb cloud-fog water, we predicted greater improvements in hydraulic functioning during fog in cloud forest species relative to non-cloud forest species. Across the cloud forest ecotone, most species measured were very resistant to losses in conductivity with branch P50 values from -4.5 to -6.0 MPa, hydraulic safety margins (Ψmin - P50) >1.5 MPa and low calculated hydraulic conductivity losses. Roots had greater vulnerabilities, with P50 values ranging from -1.4 to -2.5 MPa, leading to greater predicted losses in conductivity (∼20%). Calculated values suggested strong losses of midday leaf hydraulic conductance in three of the four species, supporting the hydraulic segmentation hypothesis. In both cloud forest and hardwood species, Ψs were greater on foggy days than sunny days, demonstrating the importance of fog periods to plant water balance across fog regimes. Thus, frequent fog did not result in systemic changes in hydraulic functioning or vulnerability to embolism across our temperate cloud forest ecotone. Finally, roots functioned with lower hydraulic conductivity than branches, suggesting that they may serve as more

Historical reconstruction of climatic and elevation preferences and the evolution of cloud forest-adapted tree ferns in Mesoamerica

OpenAIRE

Sosa, Victoria; Ornelas, Juan Francisco; Ram?rez-Barahona, Santiago; G?ndara, Etelvina

2016-01-01

Background Cloud forests, characterized by a persistent, frequent or seasonal low-level cloud cover and fragmented distribution, are one of the most threatened habitats, especially in the Neotropics. Tree ferns are among the most conspicuous elements in these forests, and ferns are restricted to regions in which minimum temperatures rarely drop below freezing and rainfall is high and evenly distributed around the year. Current phylogeographic data suggest that some of the cloud forest-adapted...

Impacts of cloud immersion on microclimate, photosynthesis and water relations of fraser fir in a temperate mountain cloud forest

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Keith Reinhardt; William K. Smith

2010-01-01

The red spruce-Fraser fir ecosystem (Picea rubens Sarg.-Abies fraseri [Pursh] Poir.) of the southern Appalachian mountains is a temperate zone cloud forest immersed in clouds for 30 to 40 percent of a typical summer day, and experiencing immersion on about 65 percent of all days annually. We compared the microclimate,...

Methods for registration laser scanner point clouds in forest stands

International Nuclear Information System (INIS)

Bienert, A.; Pech, K.; Maas, H.-G.

2011-01-01

Laser scanning is a fast and efficient 3-D measurement technique to capture surface points describing the geometry of a complex object in an accurate and reliable way. Besides airborne laser scanning, terrestrial laser scanning finds growing interest for forestry applications. These two different recording platforms show large differences in resolution, recording area and scan viewing direction. Using both datasets for a combined point cloud analysis may yield advantages because of their largely complementary information. In this paper, methods will be presented to automatically register airborne and terrestrial laser scanner point clouds of a forest stand. In a first step, tree detection is performed in both datasets in an automatic manner. In a second step, corresponding tree positions are determined using RANSAC. Finally, the geometric transformation is performed, divided in a coarse and fine registration. After a coarse registration, the fine registration is done in an iterative manner (ICP) using the point clouds itself. The methods are tested and validated with a dataset of a forest stand. The presented registration results provide accuracies which fulfill the forestry requirements [de

Interactive Trunk Extraction from Forest Point Cloud

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T. Mizoguchi

2014-06-01

Full Text Available For forest management or monitoring, it is required to constantly measure several parameters of each tree, such as height, diameter at breast height, and trunk volume. Terrestrial laser scanner has been used for this purpose instead of human workers to reduce time and cost for the measurement. In order to use point cloud captured by terrestrial laser scanner in the above applications, it is an important step to extract all trees or their trunks separately. For this purpose, we propose an interactive system in which a user can intuitively and efficiently extract each trunk by a simple editing on the distance image created from the point cloud. We demonstrate the effectiveness of our proposed system from various experiments.

Mountain cloud forest and grown-shade coffee plantations: A comparison of tree biodiversity in central Veracruz, Mexico

Energy Technology Data Exchange (ETDEWEB)

González-Zamora, A.; Esperón-Rodríguez, M.; Barradas, V.L.

2016-07-01

Aim of study: The objective of this work is to compare tree diversity and richness among one grown-shade coffee plantation (CAE) and two sites of montane cloud forests, one preserved (MCF1) and other perturbed (MCF2). We also develop an analysis of the importance of coffee plantations as a refuge of tree species, holding a potential role for conservation. Area of study: Our study area is the coffee region of Coatepec-Xico, in the state of Veracruz, Mexico. Material and methods: We compiled a list of all tree species in each site to determine tree diversity and floristic similarity (dissimilarity). We used different similarity indices and a cluster analysis to show relations among sites. Main results: 2721 individuals from 154 species were registered in the montane cloud forests as a whole. In the grown-shade coffee plantation we registered 2947 individuals from 64 species. The most similar sites were the perturbed montane cloud forest and the grown-shade coffee plantation and the least similar were the preserved montane cloud forest and the grown-shade coffee plantation. The high biodiversity found in all sites and the differences in tree composition between the two montane cloud forests supports evidence of the ecosystems richness in the region. Research highlight: Diversity differences among sites determine that the grown-shade coffee plantation is not substitute for montane cloud forest. CAE’s are developed under similar environmental conditions than the MCF; therefore, coexistence and recombination (replacement) of species make them particularly complementary. CAE’s in Veracruz have a potential role as refuge for biodiversity. (Author)

Description of the helminth communities of sympatric rodents (Muroidea: Cricetidae) from the Atlantic Forest in northeastern Argentina.

Science.gov (United States)

Panisse, Guillermo; Robles, María Del Rosario; Digiani, María Celina; Notarnicola, Juliana; Galliari, Carlos; Navone, Graciela Teresa

2017-10-17

Taxonomic and ecological aspects of the helminths found in the assemblage of sigmodontine rodents (Cricetidae-Muroidea) of the Atlantic Forest in Argentina are studied in this paper. The following species Akodon montensis, Brucepattersonius sp. and Thaptomys nigrita (Tribe Akodontini), as well as, Euryoryzomys russatus, Nectomys squamipes, Oligoryzomys nigripes, and Sooretamys angouya (Tribe Oryzomyini) are analyzed. A complete taxonomic list with a total of 25 species of helminths, including Digenea (Dicrocoeliidae), Cestoda (Hymenolepididae) and Nematoda (Trichuridae, Capillariidae, Cooperidae, Helligmonellidae, Oxyuridae, and Onchocercidae) is provided. Twenty new host and locality records for Misiones, Argentina, are reported and the results of the ecological descriptors of component communities are given. The highest value of richness was observed for A. montensis (S=8) and E. russatus (S=7). The diversity index (H´) reached values between 1.03 and 1.39 in all rodents, with the exception of N. squamipes that reached 0.75. The equitability indeces with highest value were observed for T. nigrita and E. russatus. The Berger-Parker index of dominance was similar for all host species. The highest prevalence, mean abundance and mean intensity values corresponded to Nippostrongylinae, followed by Syphacinii. This survey constitutes the report with the most diverse parasitic assemblage of rodents described for the Atlantic Forest ecoregion and for Argentina.

Biomass and water storage dynamics of epiphytes in old-growth and secondary montane cloud forest stands in Costa Rica

NARCIS (Netherlands)

Koehler, L.; Tobon, C.; Frumau, K.F.A.; Bruijnzeel, L.A.

2007-01-01

Epiphytic biomass, canopy humus and associated canopy water storage capacity are known to vary greatly between old-growth tropical montane cloud forests but for regenerating forests such data are virtually absent. The present study was conducted in an old-growth cloud forest and in a 30-year-old

Impacts of disturbance initiated by road construction in a subtropical cloud forest in the Luquillo Experimental Forest, Puerto Rico

Science.gov (United States)

Lydia P. Olander; F.N Scatena; Whendee L. Silver

1998-01-01

The impacts of road construction and the spread of exotic vegetation, which are common threats to upper elevation tropical forests, were evaluated in the subtropical cloud forests of Puerto Rico. The vegetation, soil and microclimate of 6-month-old road®lls, 35-year-old road®lls and mature forest with and without grass understories were compared. Recent road®lls had...

Mountain cloud forest and grown-shade coffee plantations: A comparison of tree biodiversity in central Veracruz, Mexico

Directory of Open Access Journals (Sweden)

Alfredo González-Zamora

2016-04-01

Full Text Available Aim of the study: The objective of this work is to compare tree diversity and richness among one grown-shade coffee plantation (CAE and two sites of montane cloud forests, one preserved (MCF1 and other perturbed (MCF2. We also develop an analysis of the importance of coffee plantations as a refuge of tree species, holding a potential role for conservation.Area of study: Our study area is the coffee region of Coatepec-Xico, in the state of Veracruz, Mexico.Material and methods: We compiled a list of all tree species in each site to determine tree diversity and floristic similarity (dissimilarity. We used different similarity indices and a cluster analysis to show relations among sites.Main results: 2721 individuals from 154 species were registered in the montane cloud forests as a whole. In the grown-shade coffee plantation we registered 2947 individuals from 64 species. The most similar sites were the perturbed montane cloud forest and the grown-shade coffee plantation and the least similar were the preserved montane cloud forest and the grown-shade coffee plantation. The high biodiversity found in all sites and the differences in tree composition between the two montane cloud forests supports evidence of the ecosystems richness in the region.Research highlight: Diversity differences among sites determine that the grown-shade coffee plantation is not substitute for montane cloud forest. CAE’s are developed under similar environmental conditions than the MCF; therefore, coexistence and recombination (replacement of species make them particularly complementary. CAE’s in Veracruz have a potential role as refuge for biodiversity.

Paleoparasitological finding of eggs of nematodes in rodent coprolites dated at the early Holocene from the archaeological site Cerro Casa de Piedra 7, Santa Cruz, Argentina.

Science.gov (United States)

Sardella, N H; Fugassa, M H

2011-12-01

The aim of the present study was to examine the parasite remains present in rodent coprolites collected from the archaeological site Cerro Casa de Piedra 7 (CCP7), located in the Perito Moreno National Park (47°57'S, 72°05'W), Santa Cruz Province, Argentina. Eight coprolites obtained from the layer 17, dated at 10,620 ± 40 to 9,390 ± 40 yr B.P., were examined for parasites. Feces were processed whole, rehydrated, homogenized, subjected to spontaneous sedimentation, and examined via light microscopy. Eggs of parasites were measured and photographed. Seven of 8 coprolites possessed 199 eggs of 2, probably new, species of nematodes, including 43 eggs of Heteroxynema sp. Hall, 1916 (Cavioxyura sp. Quentin, 1975) (Oxyurida, Heteroxynematidae), and 156 eggs of Trichuris sp. Roederer, 1761 (Trichinellida, Trichuridae). Heteroxynema sp. is cited for the first time from ancient material worldwide. The finding of Trichuris spp. in both rodents and other host samples from the area under study is indicative of the stability of the biological and environmental conditions for this nematode genus to establish in the Patagonian Early Holocene. The rodent host was assigned to an unknown species of Caviomorpha (Hystricognathi) that lived during the Pleistocenic transition in Patagonia.

Jewel scarabs (Chrysina sp.) in Honduras: key species for cloud forest conservation monitoring?

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Jocque, M; Vanhove, M P M; Creedy, T J; Burdekin, O; Nuñez-Miño, J M; Casteels, J

2013-01-01

Jewel scarabs, beetles in the genus Chrysina Kirby (Coleoptera: Rutelinae: Scarabaeidae), receive their name from the bright, often gold, green elytra that reflect light like a precious stone. Jewel scarabs are commonly observed at light traps in Mesoamerican cloud forests, and their association with mountain forests makes them potentially interesting candidates for cloud forest conservation monitoring. The absence of survey protocols and identification tools, and the little ecological information available are barriers. In the present study, collection of Chrysina species assembled during biodiversity surveys by Operation Wallacea in Cusuco National Park (CNP), Honduras, were studied. The aim of this overview is to provide an easy to use identification tool for in the field, hopefully stimulating data collection on these beetles. Based on the data associated with the collection localities, elevation distribution of the species in the park was analyzed. The limited data points available were complemented with potential distribution areas generated with distribution models based on climate and elevation data. This study is aimed at initializing the development of a survey protocol for Chrysina species that can be used in cloud forest conservation monitoring throughout Central America. A list of Chrysina species recorded from Honduras so far is provided. The six identified and one unidentified species recorded from CNP are easy to identify in the field based on color and straightforward morphological characteristics. Literature research revealed ten species currently recorded from Honduras. This low species richness in comparison with surrounding Central American countries indicates the poor knowledge of this genus in Honduras. Chrysina species richness in CNP increases with elevation, thereby making the genus one of a few groups of organisms where this correlation is observed, and rendering it a suitable invertebrate representative for cloud forest habitats in

Quantifying and Modelling the Effect of Cloud Shadows on the Surface Irradiance at Tropical and Midlatitude Forests

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Kivalov, Sergey N.; Fitzjarrald, David R.

2018-02-01

Cloud shadows lead to alternating light and dark periods at the surface, with the most abrupt changes occurring in the presence of low-level forced cumulus clouds. We examine multiyear irradiance time series observed at a research tower in a midlatitude mixed deciduous forest (Harvard Forest, Massachusetts, USA: 42.53{°}N, 72.17{°}W) and one made at a similar tower in a tropical rain forest (Tapajós National Forest, Pará, Brazil: 2.86{°}S, 54.96{°}W). We link the durations of these periods statistically to conventional meteorological reports of sky type and cloud height at the two forests and present a method to synthesize the surface irradiance time series from sky-type information. Four classes of events describing distinct sequential irradiance changes at the transition from cloud shadow and direct sunlight are identified: sharp-to-sharp, slow-to-slow, sharp-to-slow, and slow-to-sharp. Lognormal and the Weibull statistical distributions distinguish among cloudy-sky types. Observers' qualitative reports of `scattered' and `broken' clouds are quantitatively distinguished by a threshold value of the ratio of mean clear to cloudy period durations. Generated synthetic time series based on these statistics adequately simulate the temporal "radiative forcing" linked to sky type. Our results offer a quantitative way to connect the conventional meteorological sky type to the time series of irradiance experienced at the surface.

Inferred effects of cloud deposition on forest floor nutrient cycling and microbial properties along a short elevation gradient

International Nuclear Information System (INIS)

Lavoie, M.; Bradley, R.L.

2003-01-01

Higher cloud cover significantly decreases forest floor pH, decrease exchangeable cations, modifies mineral-N speciation and increases physiological stress within microbial communities. - Cloud water deposition often increases with elevation, and it is widely accepted that this cloud water increases acid loading to upland forest ecosystems. A study was undertaken in south-eastern Quebec to determine if a 250 m elevation gradient (i.e. 420-665 m), along a uniform sugar-maple stand on the slope of Mount Orford, corresponded to a pH gradient in the forest floor and to predictable changes in soil nutrient availability and microbial properties. Precipitation data from a nearby study, and a photographic survey, provided presumptive evidence that this elevation gradient corresponded to a strong gradient in cloud water deposition. Forest floor temperature did not differ significantly across elevations. Forest floor moisture content was significantly higher, whereas pH and exchangeable Ca and Mg were significantly lower, at the higher elevations. Average seasonal net nitrification rates, determined by long-term laboratory incubations, did not differ significantly across elevations, whereas average seasonal net ammonification rates were significantly higher at higher elevations. Basal respiration rates and microbial biomass did not differ significantly across elevations, but metabolic quotient was significantly higher at higher elevations indicating possible environmental stress on forest floor microbial communities due to cloud water deposition. Anaerobic N mineralisation rates were significantly higher at higher elevations suggesting that N-limited microbial communities frequently exposed to cloud cover can be important short-term sinks for atmospheric N, thereby contributing to increase the active-N fraction of forest floors. We conclude that, where no significant changes in vegetation or temperature occur, elevation gradients can still be used to understand the spatial

Leptospira and rodents in Cambodia : environmental determinants of infection

OpenAIRE

Ivanova, S.; Herbreteau, Vincent; Blasdell, K.; Chaval, Y.; Buchy, P.; Guillard, B.; Morand, S.

2012-01-01

We investigated infection of rodents and shrews by Leptospira spp. in two localities of Cambodia (Veal Renh, Kaev Seima) and in four types of habitat (forests, non-flooded lands, lowland rain-fed paddy fields, houses) during the wet and the dry seasons. Habitat preference was common, and rodent and shrew species were found only in houses or in rain-fed paddy fields or in forests. Among 649 small mammals trapped belonging to 12 rodent species and 1 shrew species, 71 of 642 animals tested were ...

Potential Distribution of Mountain Cloud Forest in Michoacán, Mexico: Prioritization for Conservation in the Context of Landscape Connectivity.

Science.gov (United States)

Correa Ayram, Camilo A; Mendoza, Manuel E; Etter, Andrés; Pérez Salicrup, Diego R

2017-07-01

Landscape connectivity is essential in biodiversity conservation because of its ability to reduce the effect of habitat fragmentation; furthermore is a key property in adapting to climate change. Potential distribution models and landscape connectivity studies have increased with regard to their utility to prioritizing areas for conservation. The objective of this study was to model the potential distribution of Mountain cloud forests in the Transversal Volcanic System, Michoacán and to analyze the role of these areas in maintaining landscape connectivity. Potential distribution was modeled for the Mountain cloud forests based on the maximum entropy approach using 95 occurrence points and 17 ecological variables at 30 m spatial resolution. Potential connectivity was then evaluated by using a probability of connectivity index based on graph theory. The percentage of variation (dPCk) was used to identify the individual contribution of each potential area of Mountain cloud forests in overall connectivity. The different ways in which the potential areas of Mountain cloud forests can contribute to connectivity were evaluated by using the three fractions derived from dPCk (dPCintrak, dPCfluxk, and dPCconnectork). We determined that 37,567 ha of the TVSMich are optimal for the presence of Mountain cloud forests. The contribution of said area in the maintenance of connectivity was low. The conservation of Mountain cloud forests is indispensable, however, in providing or receiving dispersal flows through TVSMich because of its role as a connector element between another habitat types. The knowledge of the potential capacity of Mountain cloud forests to promote structural and functional landscape connectivity is key in the prioritization of conservation areas.

77 FR 8895 - Public Land Order No. 7788; Withdrawal of National Forest System Land for the Red Cloud...

Science.gov (United States)

2012-02-15

... Land Order No. 7788; Withdrawal of National Forest System Land for the Red Cloud Campground; New Mexico... Cloud Campground within the Cibola National Forest, and to protect a capital investment in the... (FIRS) at 1-800-877-8339 to contact either of the above individuals during normal business hours. The...

Birds of a high-altitude cloud forest in Alta Verapaz, Guatemala.

Science.gov (United States)

Eisermann, Knut; Schulz, Ulrich

2005-01-01

The Northern Central American Highlands have been recognized as endemic bird area, but little is known about bird communities in Guatemalan cloud forests. From 1997 to 2001 a total of 142 bird species were recorded between 2000 and 2400 masl in cloud forest and agricultural clearings on Montaña Caquipec (Alta Verapaz, Guatemala). The bird community is described based on line transect counts within the forest. Pooling census data from undisturbed and disturbed forest, the Gray-breasted Wood-Wren (Henicorhina leucophrys) was found to be the most abundant species, followed in descending order by the Common Bush-Tanager (Chlorospingus ophthalmicus), the Paltry Tyrannulet (Zimmerius vilissimus), the Yellowish Flycatcher (Empidonax flavescens), the Ruddy-capped Nightingale-Thrush (Catharus frantzi), and the Amethyst-throated Hummingbird (Lampornis amethystinus). Bird communities in undisturbed and disturbed forest were found to be similar (Serensen similarity index 0.85), indicating low human impact. Of all recorded species, approximately 27% were Nearctic-Neotropical migratory birds. The most abundant one was the Wilson's Warbler (Wilsonia pusilla). The Montaña Caquipec is an important area for bird conservation, which is indicated by the presence of four species listed in the IUCN Red List (Highland Guan Penelopina nigra, Resplendent Quetzal Pharomachrus mocinno, Pink-headed Warbler Ergaticus versicolor, Golden-cheeked Warbler Dendroica chrysoparia), and 42 Mesoamerican endemics, of which 14 species are endemic to the Central American Highlands. The results presented here will be useful as baseline data for a long-term monitoring.

Effect of woodland patch size on rodent seed predation in a fragmented landscape

Directory of Open Access Journals (Sweden)

J. Loman

2007-05-01

Full Text Available Predation on large woody plant seeds; chestnuts, acorns and sloe kernels, was studied in deciduous forests of two size classes: small woodlots (<1 ha and large woods (at least 25 ha in southern Sweden. Seeds used for the study were artificially distributed on the forest ground and seed predation measured as seed removal. Predation rate was similar in both types of woods. However, rodent density was higher in small woodlots and a correction for differences in rodent density showed that predation rate per individual rodent was higher in the large woods. This suggests that the small woodlots (including the border zone and their adjacent fields have more rodent food per area unit. A small woodlot cannot be considered a representative sample of a large continuous forest, even if the habitats appear similar. There was a strong effect of rodent density on seed predation rate. This suggests that rodents are major seed predators in this habitat.

Understanding the role of fog in forest hydrology: Stable isotopes as tools for determining input and partitioning of cloud water in montane forests

Science.gov (United States)

Scholl, M.; Eugster, W.; Burkard, R.

2011-01-01

Understanding the hydrology of tropical montane cloud forests (TMCF) has become essential as deforestation of mountain areas proceeds at an increased rate worldwide. Passive and active cloud-water collectors, throughfall and stemflow collectors, visibility or droplet size measurements, and micrometeorological sensors are typically used to measure the fog water inputs to ecosystems. In addition, stable isotopes may be used as a natural tracer for fog and rain. Previous studies have shown that the isotopic signature of fog tends to be more enriched in the heavier isotopes 2H and 18O than that of rain, due to differences in condensation temperature and history. Differences between fog and rain isotopes are largest when rain is from synoptic-scale storms, and fog or orographic cloud water is generated locally. Smaller isotopic differences have been observed between rain and fog on mountains with orographic clouds, but only a few studies have been conducted. Quantifying fog deposition using isotope methods is more difficult in forests receiving mixed precipitation, because of limitations in the ability of sampling equipment to separate fog from rain, and because fog and rain may, under some conditions, have similar isotopic composition. This article describes the various types of fog most relevant to montane cloud forests and the importance of fog water deposition in the hydrologic budget. A brief overview of isotope hydrology provides the background needed to understand isotope applications in cloud forests. A summary of previous work explains isotopic differences between rain and fog in different environments, and how monitoring the isotopic signature of surface water, soil water and tree xylem water can yield estimates of the contribution of fog water to streamflow, groundwater recharge and transpiration. Next, instrumentation to measure fog and rain, and methods to determine isotopic concentrations in plant and soil water are discussed. The article concludes with

Historical reconstruction of climatic and elevation preferences and the evolution of cloud forest-adapted tree ferns in Mesoamerica.

Science.gov (United States)

Sosa, Victoria; Ornelas, Juan Francisco; Ramírez-Barahona, Santiago; Gándara, Etelvina

2016-01-01

Cloud forests, characterized by a persistent, frequent or seasonal low-level cloud cover and fragmented distribution, are one of the most threatened habitats, especially in the Neotropics. Tree ferns are among the most conspicuous elements in these forests, and ferns are restricted to regions in which minimum temperatures rarely drop below freezing and rainfall is high and evenly distributed around the year. Current phylogeographic data suggest that some of the cloud forest-adapted species remained in situ or expanded to the lowlands during glacial cycles and contracted allopatrically during the interglacials. Although the observed genetic signals of population size changes of cloud forest-adapted species including tree ferns correspond to predicted changes by Pleistocene climate change dynamics, the observed patterns of intraspecific lineage divergence showed temporal incongruence. Here we combined phylogenetic analyses, ancestral area reconstruction, and divergence time estimates with climatic and altitudinal data (environmental space) for phenotypic traits of tree fern species to make inferences about evolutionary processes in deep time. We used phylogenetic Bayesian inference and geographic and altitudinal distribution of tree ferns to investigate ancestral area and elevation and environmental preferences of Mesoamerican tree ferns. The phylogeny was then used to estimate divergence times and ask whether the ancestral area and elevation and environmental shifts were linked to climatic events and historical climatic preferences. Bayesian trees retrieved Cyathea, Alsophyla, Gymnosphaera and Sphaeropteris in monophyletic clades. Splits for species in these genera found in Mesoamerican cloud forests are recent, from the Neogene to the Quaternary, Australia was identified as the ancestral area for the clades of these genera, except for Gymnosphaera that was Mesoamerica. Climate tolerance was not divergent from hypothesized ancestors for the most significant

Historical reconstruction of climatic and elevation preferences and the evolution of cloud forest-adapted tree ferns in Mesoamerica

Directory of Open Access Journals (Sweden)

Victoria Sosa

2016-11-01

Full Text Available Background Cloud forests, characterized by a persistent, frequent or seasonal low-level cloud cover and fragmented distribution, are one of the most threatened habitats, especially in the Neotropics. Tree ferns are among the most conspicuous elements in these forests, and ferns are restricted to regions in which minimum temperatures rarely drop below freezing and rainfall is high and evenly distributed around the year. Current phylogeographic data suggest that some of the cloud forest-adapted species remained in situ or expanded to the lowlands during glacial cycles and contracted allopatrically during the interglacials. Although the observed genetic signals of population size changes of cloud forest-adapted species including tree ferns correspond to predicted changes by Pleistocene climate change dynamics, the observed patterns of intraspecific lineage divergence showed temporal incongruence. Methods Here we combined phylogenetic analyses, ancestral area reconstruction, and divergence time estimates with climatic and altitudinal data (environmental space for phenotypic traits of tree fern species to make inferences about evolutionary processes in deep time. We used phylogenetic Bayesian inference and geographic and altitudinal distribution of tree ferns to investigate ancestral area and elevation and environmental preferences of Mesoamerican tree ferns. The phylogeny was then used to estimate divergence times and ask whether the ancestral area and elevation and environmental shifts were linked to climatic events and historical climatic preferences. Results Bayesian trees retrieved Cyathea, Alsophyla, Gymnosphaera and Sphaeropteris in monophyletic clades. Splits for species in these genera found in Mesoamerican cloud forests are recent, from the Neogene to the Quaternary, Australia was identified as the ancestral area for the clades of these genera, except for Gymnosphaera that was Mesoamerica. Climate tolerance was not divergent from

Influence of meteorological parameters on interception of cloud droplets in a coniferous forest

Energy Technology Data Exchange (ETDEWEB)

Kroll, G; Winkler, P [Deutscher Wetterdienst, Meteorologisches Observatorium Hamburg (Germany, F.R.)

1989-11-01

The deposition of trace substances in a high elevated coniferous forest by interception of cloud droplets depends on numerous meteorological parameters. Sensitivity studies with a deposition model show that the variation of the vertical wind profile in the stand and the capture efficiency have a large influence on the deposition flux. Different drop size distributions with equal LWC's lead to changes of only 10% in the deposition flux. A higher ion concentration in small droplets has only a small influence on the trace substance deposition. A realistic estimate of the deposition is most likely achieved by using hourly observed meteorological parameters as model input values. The deposition of trace substances into a high elevated coniferous forest by interception of cloud droplets can be as high as the deposition via rain. (orig.).

Estimation of canopy water interception of a near-tropical montane cloud forest in Taiwan

Science.gov (United States)

Apurva, B.; Huang, C. Y.; Zhang, J.

2017-12-01

Tropical and subtropical montane cloud forests are some of the rarest and least studied ecosystems. Due to the frequent immersion of fog water with high humidity, these zones are major water sources for lowland environments and habitats for many fauna and flora. Their dependence on cloud water leaves them highly susceptible to the effects of climate change. Studies have been conducted to quantify the characteristics of the low altitude clouds such as spatial dynamics, cloud top and base heights, occurrence frequency or immersion duration. In this study, we carried out a field measurement to estimate canopy water interception (CWI), which is directly utilized by the ecosystems. The study site was a 61 ha near-tropical hinoki cypress montane cloud forest plantation in northern Taiwan at 1705 m asl. Leaves of CHOB were clipped, air-dried and attached to trees at three different canopy depths from the top to the base of canopies along a high tower. The samples were weighed before and after the occurrence of a fog event. In addition, a cylinder shaped fog gauge was installed at the ground level next to the tower to assess amount of fog water penetrating the canopy layer. After afternoon fog events with the duration of 60 minutes, we found that there was an apparent trend of decline of CWI from top (mean ± standard deviation = 0.023 g ± 0.0015 g), middle (0.021 g ± 0.0015 g) to the bottom (0.013 g ± 0.0015 g) of the canopies. Since the study site is a coniferous evergreen forest plantation with a relatively homogenous surface through seasons, with the background knowledge of the average leaf area index of 4.4, we estimated that this 61 ha site harvested 28.2 Mg of CWI for a daily fog event. We also found that no clear evidence of CWI was observed below the canopies by referring to bi-weekly records from the cylinder shaded fog gauge. Therefore, we can assume that the majority fog water was intercepted by the hinoki cypress canopy layer. This study demonstrates that a

The role of frugivorous birds and bats in the colonization of cloud forest plant species in burned areas in western Mexico

Directory of Open Access Journals (Sweden)

Rost, J.

2015-07-01

Full Text Available The extension of montane cloud forests in western Mexico is threatened by several disturbances that limit their extension. In this study we aim to assess the contribution of birds and bats in the dispersal and colonization of cloud–forest plants in contiguous surface–burned pine forests. We sampled seed rain and sapling establishment over one year in two surface–burned sites, which differed in the size of their closest cloud forest patch. A total of 17 plant species were found, most of which were late–successional trees, shrubs and climbers. Distance influenced the seed rain of only one dispersed taxon (Solanum sp. and had no effect on the sapling distribution of this or other plants. In turn, marked differences were found between sites, with more seeds dispersed and higher sapling density in the site that was next to the larger cloud forest patch. The role of long–distance dispersers and the existence of seed banks before fire could explain the little importance of distance from seed source on seed dispersal and sapling distribution. Nevertheless, dispersal by birds and bats before or after fire facilitates the regeneration and conservation of cloud forests in disturbed areas formerly occupied by other habitats.

Structure, richness and composition of arboreal plants in a cloud thinning forest of Tolima (Colombia)

International Nuclear Information System (INIS)

Campo Kurmen, Juan Manuel

2010-01-01

Structure, richness, and floristic composition of the woody elements of the selective logging forest of the Vereda Dantas, (Ibague, Tolima, Colombia), where studied in a 0.1 ha plot sampled for all individuals ≥2.5 cm dbh. the forest is characterized by scarcity of lianas and hemiepiphytic, absence of typical families of the Colombian cloud forests between 2000 and 2500 m (Araceae, Ericaceae, Myrtaceae, Meliaceae and Aquifoliaceae), and richness increment of the Sabiaceae and Euphorbiaceae. Compared to others cloud forest from the Colombian Andes and the Neotropic, it has, fewer individuals (237 individuals ≥2.5 cm dbh per 0.1 ha) and more large trees (39.7% of individuals ≥10 cm dbh per 0.1 ha). The forest has a lower woody species richness (75 species ≥2.5 cm dbh per 0.1 ha). Apparently, the effects of selective timber extraction on structure, richness, and floristic composition are decrease floristic richness and density of individuals, decrease of lianas density and richness, and more individuals of secondary species, likes: Hedyosmum goudotianum Slms-Laubach var. goudatianum, Miconia resima Naud, and Palicourea calophlebia Standl.

Clusia nubium (Clusiaceae): a new species from cloud-forests of southwestern Ecuador

DEFF Research Database (Denmark)

Gustafsson, Mats; Borchsenius, Finn

2016-01-01

Clusia nubium from southwestern Ecuador is described as a species new to science. It grows as a hemiepiphyte in lower montane cloud forest. The species belongs to Clusia sect. Retinostemon, a largely Andean group characterized by male flowers with a resin-secreting synandrium of completely fused...

First experimental evidence for carbon starvation at warm temperatures in epiphytic orchids of tropical cloud forests

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Hoch, Guenter; Roemer, Helena; Fioroni, Tiffany; Olmedo, Inayat; Kahmen, Ansgar

2017-04-01

Tropical cloud forests are among the most climate sensitive ecosystems world-wide. The lack of a strong seasonality and the additional dampening of temperature fluctuations by the omnipresence of clouds and fog produce year-round constant climatic conditions. With climate change the presence of clouds and fog is, however, predicted to be reduced. The disappearance of the cooling fog cover will have dramatic consequences for air temperatures, that are predicted to increase locally well over 5 °C by the end of the 21st century. Especially the large number of endemic epiphytic orchids in tropical cloud forests that contribute substantially to the biological diversity of these ecosystems, but are typically adapted to a very narrow climate envelope, are speculated to be very sensitive to the anticipated rise in temperature. In a phytotron experiment we investigated the effect of increasing temperatures on the carbon balance (gas-exchange and the carbon reserve household) of 10 epiphytic orchid species from the genera Dracula, native to tropical, South-American cloud forests. The orchids were exposed to three temperature treatments: i) a constant temperature treatment (23°C/13°C, day/night) simulating natural conditions, ii) a slow temperature ramp of +0.75 K every 10 days, and iii) a fast temperature ramp of +1.5 K every 10 days. CO2 leaf gas-exchanges was determined every 10 days, and concentrations of low molecular weight sugars and starch were analyses from leaf samples throughout the experiment. We found that increasing temperatures had only minor effects on day-time leaf respiration, but led to a moderate increase of respiration during night-time. In contrast to the rather minor effects of higher temperatures on respiration, there was a dramatic decline of net-photosynthesis above day-time temperatures of 29°C, and a complete stop of net-carbon uptake at 33°C in all investigated species. This high sensitivity of photosynthesis to warming was independent of the

Post-dispersal seed removal by ground-feeding rodents in tropical peatlands, Central Kalimantan, Indonesia

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Blackham, Grace V.; Corlett, Richard T.

2015-01-01

Forested tropical peatlands in Southeast Asia are being rapidly converted to agriculture or degraded into non-forest vegetation. Although large areas have been abandoned, there is little evidence for subsequent forest recovery. As part of a study of forest degradation and recovery, we used seed removal experiments and rodent surveys to investigate the potential role of post-dispersal seed predation in limiting the regeneration of woody plants. Two 14-day seed removal trials were done in deforested and forested peatland habitat in Central Kalimantan, Indonesia. Seeds of Nephelium lappaceum, Syzygium muelleri, Artocarpus heterophyllus (all animal-dispersed) and Combretocarpus rotundatus (wind-dispersed) were tested. Significantly more seeds (82.8%) were removed in forest than non-forest (38.1%) and Combretocarpus had the lowest removal in both habitats. Most handled seeds were eaten in situ and little caching was observed. Six species of rodents were captured in forest and five in non-forest. The most trapped taxa were three Maxomys spp. in forest (85.5% of individuals) and Rattus tiomanicus in non-forest (74.8%). Camera traps confirmed that rodents were responsible for seed removal. Seed predation in deforested areas, which have a much lower seed rain than forest, may contribute to the low density and diversity of regenerating forest. PMID:26369444

Water relations and microclimate around the upper limit of a cloud forest in Maui, Hawai'i.

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Gotsch, Sybil G; Crausbay, Shelley D; Giambelluca, Thomas W; Weintraub, Alexis E; Longman, Ryan J; Asbjornsen, Heidi; Hotchkiss, Sara C; Dawson, Todd E

2014-07-01

The goal of this study was to determine the effects of atmospheric demand on both plant water relations and daily whole-tree water balance across the upper limit of a cloud forest at the mean base height of the trade wind inversion in the tropical trade wind belt. We measured the microclimate and water relations (sap flow, water potential, stomatal conductance, pressure-volume relations) of Metrosideros polymorpha Gaudich. var. polymorpha in three habitats bracketing the cloud forest's upper limit in Hawai'i to understand the role of water relations in determining ecotone position. The subalpine shrubland site, located 100 m above the cloud forest boundary, had the highest vapor pressure deficit, the least amount of rainfall and the highest levels of nighttime transpiration (EN) of all three sites. In the shrubland site, on average, 29% of daily whole-tree transpiration occurred at night, while on the driest day of the study 50% of total daily transpiration occurred at night. While EN occurred in the cloud forest habitat, the proportion of total daily transpiration that occurred at night was much lower (4%). The average leaf water potential (Ψleaf) was above the water potential at the turgor loss point (ΨTLP) on both sides of the ecotone due to strong stomatal regulation. While stomatal closure maintained a high Ψleaf, the minimum leaf water potential (Ψleafmin) was close to ΨTLP, indicating that drier conditions may cause drought stress in these habitats and may be an important driver of current landscape patterns in stand density. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Object-Based Coregistration of Terrestrial Photogrammetric and ALS Point Clouds in Forested Areas

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Polewski, P.; Erickson, A.; Yao, W.; Coops, N.; Krzystek, P.; Stilla, U.

2016-06-01

Airborne Laser Scanning (ALS) and terrestrial photogrammetry are methods applicable for mapping forested environments. While ground-based techniques provide valuable information about the forest understory, the measured point clouds are normally expressed in a local coordinate system, whose transformation into a georeferenced system requires additional effort. In contrast, ALS point clouds are usually georeferenced, yet the point density near the ground may be poor under dense overstory conditions. In this work, we propose to combine the strengths of the two data sources by co-registering the respective point clouds, thus enriching the georeferenced ALS point cloud with detailed understory information in a fully automatic manner. Due to markedly different sensor characteristics, coregistration methods which expect a high geometric similarity between keypoints are not suitable in this setting. Instead, our method focuses on the object (tree stem) level. We first calculate approximate stem positions in the terrestrial and ALS point clouds and construct, for each stem, a descriptor which quantifies the 2D and vertical distances to other stem centers (at ground height). Then, the similarities between all descriptor pairs from the two point clouds are calculated, and standard graph maximum matching techniques are employed to compute corresponding stem pairs (tiepoints). Finally, the tiepoint subset yielding the optimal rigid transformation between the terrestrial and ALS coordinate systems is determined. We test our method on simulated tree positions and a plot situated in the northern interior of the Coast Range in western Oregon, USA, using ALS data (76 x 121 m2) and a photogrammetric point cloud (33 x 35 m2) derived from terrestrial photographs taken with a handheld camera. Results on both simulated and real data show that the proposed stem descriptors are discriminative enough to derive good correspondences. Specifically, for the real plot data, 24

Data from camera surveys identifying co-occurrence and occupancy linkages between fishers (Pekania pennanti, rodent prey, mesocarnivores, and larger predators in mixed-conifer forests

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Rick A. Sweitzer

2016-03-01

Full Text Available These data provide additional information relevant to the frequency of fisher detections by camera traps, and single-season occupancy and local persistence of fishers in small patches of forest habitats detailed elsewhere, “Landscape Fuel Reduction, Forest Fire, and Biophysical Linkages to Local Habitat Use and Local Persistence of Fishers (Pekania pennanti in Sierra Nevada Mixed-conifer Forests” [10]. The data provides insight on camera trap detections of 3 fisher predators (bobcat [Lynx rufus]. Coyote [Canis latrans], mountain lion [Puma concolor], 5 mesocarnivores in the same foraging guild as fishers (gray fox [Urocyon cinereoargenteus] ringtail [Bassariscus astutus], marten [Martes americana], striped skunk [Mephitis mephitis] spotted skunk [Spilogale gracilis], and 5 Sciuridae rodents that fishers consume as prey (Douglas squirrel [Tamiasciurus douglasii], gray squirrel [Sciurus griseus], northern flying squirrel [Glaucomys sabrinus], long-eared chipmunk [Neotamias quadrimaculatus], California ground squirrel [Spermophilus beecheyi]. We used these data to identify basic patterns of co-occurrence with fishers, and to evaluate the relative importance of presence of competing mesocarnivores, rodent prey, and predators for fisher occupancy of small, 1 km2 grid cells of forest habitat. Keywords: Carnivores, Competition, Distribution, Foraging guild, Predation, Tree squirrels

Do Cloud Properties in a Puerto Rican Tropical Montane Cloud Forest Depend on Occurrence of Long-Range Transported African Dust?

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Spiegel, Johanna K.; Buchmann, Nina; Mayol-Bracero, Olga L.; Cuadra-Rodriguez, Luis A.; Valle Díaz, Carlos J.; Prather, Kimberly A.; Mertes, Stephan; Eugster, Werner

2014-09-01

We investigated cloud properties of warm clouds in a tropical montane cloud forest at Pico del Este (1,051 m a.s.l.) in the northeastern part of Puerto Rico to address the question of whether cloud properties in the Caribbean could potentially be affected by African dust transported across the Atlantic Ocean. We analyzed data collected during 12 days in July 2011. Cloud droplet size spectra were measured using the FM-100 fog droplet spectrometer that measured droplet size distributions in the range from 2 to 49 µm, primarily during fog events. The droplet size spectra revealed a bimodal structure, with the first peak ( D < 6 µm) being more pronounced in terms of droplet number concentrations, whereas the second peak (10 µm < D < 20 µm) was found to be the one relevant for total liquid water content (LWC) of the cloud. We identified three major clusters of characteristic droplet size spectra by means of hierarchical clustering. All clusters differed significantly from each other in droplet number concentration (), effective diameter (ED), and median volume diameter (MVD). For the cluster comprising the largest droplets and the lowest droplet number concentrations, we found evidence of inhomogeneous mixing in the cloud. Contrastingly, the other two clusters revealed microphysical behavior, which could be expected under homogeneous mixing conditions. For those conditions, an increase in cloud condensation nuclei—e.g., from processed African dust transported to the site—is supposed to lead to an increased droplet concentration. In fact, one of these two clusters showed a clear shift of cloud droplet size spectra towards smaller droplet diameters. Since this cluster occurred during periods with strong evidence for the presence of long-range transported African dust, we hypothesize a link between the observed dust episodes and cloud characteristics in the Caribbean at our site, which is similar to the anthropogenic aerosol indirect effect.

Endocarp thickness affects seed removal speed by small rodents in a warm-temperate broad-leafed deciduous forest, China

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Zhang, Hongmao; Zhang, Zhibin

2008-11-01

Seed traits are important factors affecting seed predation by rodents and thereby the success of recruitment. Seeds of many tree species have hard hulls. These are thought to confer mechanical protection, but the effect of endocarp thickness on seed predation by rodents has not been well investigated. Wild apricot ( Prunus armeniaca), wild peach ( Amygdalus davidiana), cultivated walnut ( Juglans regia), wild walnut ( Juglans mandshurica Maxim) and Liaodong oak ( Quercus liaotungensis) are very common tree species in northwestern Beijing city, China. Their seeds vary greatly in size, endocarp thickness, caloric value and tannin content. This paper aims to study the effects of seed traits on seed removal speed of these five tree species by small rodents in a temperate deciduous forest, with emphasis on the effect of endocarp thickness. The results indicated that speed of removal of seeds released at stations in the field decreased significantly with increasing endocarp thickness. We found no significant correlations between seed removal speed and other seed traits such as seed size, caloric value and tannin content. In seed selection experiments in small cages, Père David's rock squirrel ( Sciurotamias davidianus), a large-bodied, strong-jawed rodent, selected all of the five seed species, and the selection order among the five seed species was determined by endocarp thickness and the ratio of endocarp mass/seed mass. In contrast, the Korean field mouse ( Apodemus peninsulae) and Chinese white-bellied rat ( Niviventer confucianus), with relatively small bodies and weak jaws, preferred to select small seeds like acorns of Q. liaotungensis and seeds of P. armeniaca, indicating that rodent body size is also an important factor affecting food selection based on seed size. These results suggest endocarp thickness significantly reduces seed removal speed by rodents and then negatively affects dispersal fitness of seeds before seed removal of tree species in the study

Effects of competition and facilitation on species assemblage in two types of tropical cloud forest.

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Wenxing Long

Full Text Available Competition and facilitation between tree individuals are two kinds of non-random processes influencing the structure and functioning of forest communities, but how these two plant-plant interactions change along gradient of resources or environments remains very much a matter of debate. We developed a null model to test the size-distance regression, and assessed the effects of competition and facilitation (including interspecific interactions, intraspecific interactions and overall species interactions on each adult tree species assemblage [diameter at breast height (dbh ≥5 cm] across two types of tropical cloud forest with different environmental and resource regimes. The null model test revealed that 17% to 27% tree species had positive dbh-distance correlations while 11% to 19% tree species showed negative dbh-distance correlations within these two forest types, indicating that both competition and facilitation processes existed during the community assembly. The importance of competition for heterospecific species, and the intensity of competition for both heterospecific and overall species increased from high to low resources for all the shared species spanning the two forests. The importance of facilitation for conspecific and overall species, as well as that the intensity of facilitation for both heterospecific and conspecific species increased with increasing low air temperature stress for all the shared species spanning the two forests. Our results show that both competition and facilitation processes simultaneously affect parts of species assemblage in the tropical cloud forests. Moreover, the fact that nearly 50% species assemblage is not detected with our approaches suggest that tree species in these tropical forest systems are assembled with multiple ecological processes, and that there is a need to explore the processes other than the two biotic interactions in further researches.

forest birds in the Ongoye Forest Reserve, KwaZulu-Natal

African Journals Online (AJOL)

1997-02-03

Feb 3, 1997 ... Amazonian Peru to support the edge-effect principle. By choosing a large forest and ... rodents, anurans; see Laurance 1990) is overdue. We also agree with .... Edge and other effects of isolation on Amazon forest fragments.

FOREST Unbiased Galactic plane Imaging survey with the Nobeyama 45 m telescope (FUGIN): Molecular clouds toward W 33; possible evidence for a cloud-cloud collision triggering O star formation

Science.gov (United States)

Kohno, Mikito; Torii, Kazufumi; Tachihara, Kengo; Umemoto, Tomofumi; Minamidani, Tetsuhiro; Nishimura, Atsushi; Fujita, Shinji; Matsuo, Mitsuhiro; Yamagishi, Mitsuyoshi; Tsuda, Yuya; Kuriki, Mika; Kuno, Nario; Ohama, Akio; Hattori, Yusuke; Sano, Hidetoshi; Yamamoto, Hiroaki; Fukui, Yasuo

2018-05-01

We observed molecular clouds in the W 33 high-mass star-forming region associated with compact and extended H II regions using the NANTEN2 telescope as well as the Nobeyama 45 m telescope in the J = 1-0 transitions of 12CO, 13CO, and C18O as part of the FOREST Unbiased Galactic plane Imaging survey with the Nobeyama 45 m telescope (FUGIN) legacy survey. We detected three velocity components at 35 km s-1, 45 km s-1, and 58 km s-1. The 35 km s-1 and 58 km s-1 clouds are likely to be physically associated with W 33 because of the enhanced 12CO J = 3-2 to J = 1-0 intensity ratio as R_3-2/1-0} > 1.0 due to the ultraviolet irradiation by OB stars, and morphological correspondence between the distributions of molecular gas and the infrared and radio continuum emissions excited by high-mass stars. The two clouds show complementary distributions around W 33. The velocity separation is too large to be gravitationally bound, and yet not explained by expanding motion by stellar feedback. Therefore, we discuss whether a cloud-cloud collision scenario likely explains the high-mass star formation in W 33.

Assessing the performance of aerial image point cloud and spectral metrics in predicting boreal forest canopy cover

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Melin, M.; Korhonen, L.; Kukkonen, M.; Packalen, P.

2017-07-01

Canopy cover (CC) is a variable used to describe the status of forests and forested habitats, but also the variable used primarily to define what counts as a forest. The estimation of CC has relied heavily on remote sensing with past studies focusing on satellite imagery as well as Airborne Laser Scanning (ALS) using light detection and ranging (lidar). Of these, ALS has been proven highly accurate, because the fraction of pulses penetrating the canopy represents a direct measurement of canopy gap percentage. However, the methods of photogrammetry can be applied to produce point clouds fairly similar to airborne lidar data from aerial images. Currently there is little information about how well such point clouds measure canopy density and gaps. The aim of this study was to assess the suitability of aerial image point clouds for CC estimation and compare the results with those obtained using spectral data from aerial images and Landsat 5. First, we modeled CC for n = 1149 lidar plots using field-measured CCs and lidar data. Next, this data was split into five subsets in north-south direction (y-coordinate). Finally, four CC models (AerialSpectral, AerialPointcloud, AerialCombi (spectral + pointcloud) and Landsat) were created and they were used to predict new CC values to the lidar plots, subset by subset, using five-fold cross validation. The Landsat and AerialSpectral models performed with RMSEs of 13.8% and 12.4%, respectively. AerialPointcloud model reached an RMSE of 10.3%, which was further improved by the inclusion of spectral data; RMSE of the AerialCombi model was 9.3%. We noticed that the aerial image point clouds managed to describe only the outermost layer of the canopy and missed the details in lower canopy, which was resulted in weak characterization of the total CC variation, especially in the tails of the data.

Land cover and forest formation distributions for St. Kitts, Nevis, St. Eustatius, Grenada and Barbados from decision tree classification of cloud-cleared satellite imagery

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Helmer, E.H.; Kennaway, T.A.; Pedreros, D.H.; Clark, M.L.; Marcano-Vega, H.; Tieszen, L.L.; Ruzycki, T.R.; Schill, S.R.; Carrington, C.M.S.

2008-01-01

Satellite image-based mapping of tropical forests is vital to conservation planning. Standard methods for automated image classification, however, limit classification detail in complex tropical landscapes. In this study, we test an approach to Landsat image interpretation on four islands of the Lesser Antilles, including Grenada and St. Kitts, Nevis and St. Eustatius, testing a more detailed classification than earlier work in the latter three islands. Secondly, we estimate the extents of land cover and protected forest by formation for five islands and ask how land cover has changed over the second half of the 20th century. The image interpretation approach combines image mosaics and ancillary geographic data, classifying the resulting set of raster data with decision tree software. Cloud-free image mosaics for one or two seasons were created by applying regression tree normalization to scene dates that could fill cloudy areas in a base scene. Such mosaics are also known as cloud-filled, cloud-minimized or cloud-cleared imagery, mosaics, or composites. The approach accurately distinguished several classes that more standard methods would confuse; the seamless mosaics aided reference data collection; and the multiseason imagery allowed us to separate drought deciduous forests and woodlands from semi-deciduous ones. Cultivated land areas declined 60 to 100 percent from about 1945 to 2000 on several islands. Meanwhile, forest cover has increased 50 to 950%. This trend will likely continue where sugar cane cultivation has dominated. Like the island of Puerto Rico, most higher-elevation forest formations are protected in formal or informal reserves. Also similarly, lowland forests, which are drier forest types on these islands, are not well represented in reserves. Former cultivated lands in lowland areas could provide lands for new reserves of drier forest types. The land-use history of these islands may provide insight for planners in countries currently considering

New phiomorph rodents from the latest Eocene of Egypt, and the impact of Bayesian "clock"-based phylogenetic methods on estimates of basal hystricognath relationships and biochronology.

Science.gov (United States)

Sallam, Hesham M; Seiffert, Erik R

2016-01-01

The Fayum Depression of Egypt has yielded fossils of hystricognathous rodents from multiple Eocene and Oligocene horizons that range in age from ∼37 to ∼30 Ma and document several phases in the early evolution of crown Hystricognathi and one of its major subclades, Phiomorpha. Here we describe two new genera and species of basal phiomorphs, Birkamys korai and Mubhammys vadumensis, based on rostra and maxillary and mandibular remains from the terminal Eocene (∼34 Ma) Fayum Locality 41 (L-41). Birkamys is the smallest known Paleogene hystricognath, has very simple molars, and, like derived Oligocene-to-Recent phiomorphs (but unlike contemporaneous and older taxa) apparently retained dP(4)∕4 late into life, with no evidence for P(4)∕4 eruption or formation. Mubhammys is very similar in dental morphology to Birkamys, and also shows no evidence for P(4)∕4 formation or eruption, but is considerably larger. Though parsimony analysis with all characters equally weighted places Birkamys and Mubhammys as sister taxa of extant Thryonomys to the exclusion of much younger relatives of that genus, all other methods (standard Bayesian inference, Bayesian "tip-dating," and parsimony analysis with scaled transitions between "fixed" and polymorphic states) place these species in more basal positions within Hystricognathi, as sister taxa of Oligocene-to-Recent phiomorphs. We also employ tip-dating as a means for estimating the ages of early hystricognath-bearing localities, many of which are not well-constrained by geological, geochronological, or biostratigraphic evidence. By simultaneously taking into account phylogeny, evolutionary rates, and uniform priors that appropriately encompass the range of possible ages for fossil localities, dating of tips in this Bayesian framework allows paleontologists to move beyond vague and assumption-laden "stage of evolution" arguments in biochronology to provide relatively rigorous age assessments of poorly-constrained faunas. This

[Historic record of Gastrotheca ovifera (Anura: Hemiphractidae): decline evidence in Venezuelan coastal cloud forests].

Science.gov (United States)

Valera-Leal, Javier; Acevedo, Aldemar; Pérez-Sánchez, Antonio; Vega, Jorge; Manzanilla, Jesús

2011-03-01

G. ovifera is a marsupial frog of the cloud and riparian forest from Western and Litoral sections of the Venezuelan Cordillera de la Costa (820-2 000m). This amphibian is considered as an endangered species by the IUCN Species Red List, due to its population decline in pristine and well preserved environments. This conservation status is based on anecdotic interpretations. We collected disperse data from museum records (national and international) and explored the possible association between collection records and precipitation data available for the Henri Pittier National Park (PNHP). Likewise, we carried out a systematic population monitoring of G. ovifera in historic and additional localities among the cloud forest of Rancho Grande, PNHP. We found 106 individuals in 11 zoological collections deposited during 1929-2007. After an effort of 646 hours/person we did not detect G. ovifera individuals in the evaluated localities; as well as no statistical significant associations between the annual precipitation average and the historic records of the species during 1941-1997 period (r = -0.054, p = 0.820, n = 19). We discussed the distribution, fluctuation and population changes of this species, analyzing it conservation status.

Rain chemistry and cloud composition and microphysics in a Caribbean tropical montane cloud forest under the influence of African dust

Science.gov (United States)

Torres-Delgado, Elvis; Valle-Diaz, Carlos J.; Baumgardner, Darrel; McDowell, William H.; González, Grizelle; Mayol-Bracero, Olga L.

2015-04-01

It is known that huge amounts of mineral dust travels thousands of kilometers from the Sahara and Sahel regions in Africa over the Atlantic Ocean reaching the Caribbean, northern South America and southern North America; however, not much is understood about how the aging process that takes place during transport changes dust properties, and how the presence of this dust affects cloud's composition and microphysics. This African dust reaches the Caribbean region mostly in the summer time. In order to improve our understanding of the role of long-range transported African dust (LRTAD) in cloud formation processes in a tropical montane cloud forest (TMCF) in the Caribbean region we had field campaigns measuring dust physical and chemical properties in summer 2013, as part of the Puerto Rico African Dust and Cloud Study (PRADACS), and in summer 2014, as a part of the Luquillo Critical Zone Observatory (LCZO) and in collaboration with the Saharan Aerosol Long-Range Transport and Aerosol-Cloud-Interaction Experiment (SALTRACE). Measurements were performed at the TMCF of Pico del Este (PE, 1051 masl) and at the nature reserve of Cabezas de San Juan (CSJ, 60 masl). In both stations we monitored meteorological parameters (e.g., temperature, wind speed, wind direction). At CSJ, we measured light absorption and scattering at three wavelengths (467, 528 and 652 nm). At PE we collected cloud and rainwater and monitored cloud microphysical properties (e.g., liquid water content, droplet size distribution, droplet number concentration, effective diameter and median volume diameter). Data from aerosol models, satellites, and back-trajectories were used together with CSJ measurements to classify air masses and samples collected at PE in the presence or absence of dust. Soluble ions, insoluble trace metals, pH and conductivity were measured for cloud and rainwater. Preliminary results for summer 2013 showed that in the presence of LRTAD (1) the average conductivity of cloud water

New phiomorph rodents from the latest Eocene of Egypt, and the impact of Bayesian “clock”-based phylogenetic methods on estimates of basal hystricognath relationships and biochronology

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Hesham M. Sallam

2016-03-01

Full Text Available The Fayum Depression of Egypt has yielded fossils of hystricognathous rodents from multiple Eocene and Oligocene horizons that range in age from ∼37 to ∼30 Ma and document several phases in the early evolution of crown Hystricognathi and one of its major subclades, Phiomorpha. Here we describe two new genera and species of basal phiomorphs, Birkamys korai and Mubhammys vadumensis, based on rostra and maxillary and mandibular remains from the terminal Eocene (∼34 Ma Fayum Locality 41 (L-41. Birkamys is the smallest known Paleogene hystricognath, has very simple molars, and, like derived Oligocene-to-Recent phiomorphs (but unlike contemporaneous and older taxa apparently retained dP4∕4 late into life, with no evidence for P4∕4 eruption or formation. Mubhammys is very similar in dental morphology to Birkamys, and also shows no evidence for P4∕4 formation or eruption, but is considerably larger. Though parsimony analysis with all characters equally weighted places Birkamys and Mubhammys as sister taxa of extant Thryonomys to the exclusion of much younger relatives of that genus, all other methods (standard Bayesian inference, Bayesian “tip-dating,” and parsimony analysis with scaled transitions between “fixed” and polymorphic states place these species in more basal positions within Hystricognathi, as sister taxa of Oligocene-to-Recent phiomorphs. We also employ tip-dating as a means for estimating the ages of early hystricognath-bearing localities, many of which are not well-constrained by geological, geochronological, or biostratigraphic evidence. By simultaneously taking into account phylogeny, evolutionary rates, and uniform priors that appropriately encompass the range of possible ages for fossil localities, dating of tips in this Bayesian framework allows paleontologists to move beyond vague and assumption-laden “stage of evolution” arguments in biochronology to provide relatively rigorous age assessments of poorly

New phiomorph rodents from the latest Eocene of Egypt, and the impact of Bayesian “clock”-based phylogenetic methods on estimates of basal hystricognath relationships and biochronology

Science.gov (United States)

2016-01-01

The Fayum Depression of Egypt has yielded fossils of hystricognathous rodents from multiple Eocene and Oligocene horizons that range in age from ∼37 to ∼30 Ma and document several phases in the early evolution of crown Hystricognathi and one of its major subclades, Phiomorpha. Here we describe two new genera and species of basal phiomorphs, Birkamys korai and Mubhammys vadumensis, based on rostra and maxillary and mandibular remains from the terminal Eocene (∼34 Ma) Fayum Locality 41 (L-41). Birkamys is the smallest known Paleogene hystricognath, has very simple molars, and, like derived Oligocene-to-Recent phiomorphs (but unlike contemporaneous and older taxa) apparently retained dP4∕4 late into life, with no evidence for P4∕4 eruption or formation. Mubhammys is very similar in dental morphology to Birkamys, and also shows no evidence for P4∕4 formation or eruption, but is considerably larger. Though parsimony analysis with all characters equally weighted places Birkamys and Mubhammys as sister taxa of extant Thryonomys to the exclusion of much younger relatives of that genus, all other methods (standard Bayesian inference, Bayesian “tip-dating,” and parsimony analysis with scaled transitions between “fixed” and polymorphic states) place these species in more basal positions within Hystricognathi, as sister taxa of Oligocene-to-Recent phiomorphs. We also employ tip-dating as a means for estimating the ages of early hystricognath-bearing localities, many of which are not well-constrained by geological, geochronological, or biostratigraphic evidence. By simultaneously taking into account phylogeny, evolutionary rates, and uniform priors that appropriately encompass the range of possible ages for fossil localities, dating of tips in this Bayesian framework allows paleontologists to move beyond vague and assumption-laden “stage of evolution” arguments in biochronology to provide relatively rigorous age assessments of poorly-constrained faunas

The Role of African Dust Particles on Cloud Chemistry and Microphysics in a Tropical Montane Cloud Forest in the Caribbean

Science.gov (United States)

Torres-Delgado, E.; Valle-Diaz, C. J.; Baumgardner, D.; McDowell, W. H.; Gonzalez, G.; Mayol-Bracero, O. L.

2015-12-01

Huge amounts of African dust travels thousands of kilometers from the Sahara and Sahel regions to the Caribbean, northern South America and southern North America. However, not much is understood about how the aging process that takes place during transport changes dust properties, and how it affects cloud's composition and microphysics. In order to improve our understanding of the role of long-range transported African dust (LRTAD) in cloud formation processes we had field campaigns measuring dust physical and chemical properties in summers of 2013, 2014 and 2015, as part of the Puerto Rico African Dust and Cloud Study (PRADACS), and of the Luquillo Critical Zone Observatory (LCZO). Measurements were performed at the tropical montane cloud forest (TMCF) of Pico del Este (PE, 1051 masl) and at the nature reserve of Cabezas de San Juan (CSJ, 60 masl). In both ground stations we monitored meteorological parameters (e.g., temperature, wind speed, wind direction). At CSJ, we measured light absorption and scattering at three wavelengths (467, 528 and 652 nm). At PE we collected cloud and rainwater for chemical analyses and monitored cloud microphysical properties (e.g., liquid water content, droplet size distribution, droplet number concentration, effective diameter and median volume diameter). Summer 2015 was the first attempt to characterize microphysical properties of the summer period (June to August) at PE, where dust is in its higher concentrations of the year. Samples were classified using data from models and satellites together with CSJ measurements as low or high dust influenced. Soluble ions, insoluble trace metals, pH, conductivity, total and dissolved organic carbon and total and dissolved nitrogen were measured for cloud and rainwater. Enrichment factor analysis was used to determine sea and crustal contribution of species by sample, as well as the neutralization factor and fractional acidity. Some preliminary results show cloud water conductivity for low

Exploring interactions between payment for hydrologic service policies, landowner decisions, and ecohydrology in a Mexican cloud forest watershed: Is there a disconnect between the policy and the resource?

Science.gov (United States)

Asbjornsen, H.; Geissert, D.; Gomez-Tagle, A.; Holwerda, F.; Manson, R.; Perez-Maqueo, O.; Munoz-Villers, L.; Scullion, J.

2013-05-01

Payment for hydrologic service (PHS) programs are increasingly being used as a means to incentivize watershed protection by compensating upstream 'water producers' with payments made by downstream 'water consumers'. However, the effectiveness of PHS programs in achieving their target goals is often poorly understood. Here, we draw from insights obtained from socioeconomic and ecohydrological research in Veracruz, Mexico to explore interactions between PHS policies, landowner decisions, and hydrologic services. GIS analysis of land-cover changes during 2003-2009 combined with interviews of PHS participants indicated that despite lower deforestation rates on properties receiving PES payments, other factors were likely to have a greater influence on land use decisions than PHS payments per se, including opportunity costs and personal conservation ethic. The interviews also highlighted a general lack of trust and cooperation between the citizen participants and government administrators, which was reflected in the relatively low level of knowledge of the PHS programs' regulations and goals, the role of forests in protecting water resources, and a low level of co-financing by the private sector. An important premise of PHS programs is that protecting existing forest cover (and planting trees) will enhance water supply, especially in upland cloud forests that are due to their perceived role as water producers. Measurements of climate, steamflow, canopy fog interception, plant transpiration, soil water dynamics, and hydrologic flow paths were collected over a 3-year period to assess stand water balance and streamflow response under four different land covers: mature cloud forest, pasture, regenerating cloud forest, pine reforestation. Results suggested relatively minor additional inputs of fog to increasing streamflow in cloud forest watersheds, while conversion of forest to pasture did not markedly decrease dry season flows, but did increase annual flows due to lower

Uav-Based Photogrammetric Point Clouds and Hyperspectral Imaging for Mapping Biodiversity Indicators in Boreal Forests

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Saarinen, N.; Vastaranta, M.; Näsi, R.; Rosnell, T.; Hakala, T.; Honkavaara, E.; Wulder, M. A.; Luoma, V.; Tommaselli, A. M. G.; Imai, N. N.; Ribeiro, E. A. W.; Guimarães, R. B.; Holopainen, M.; Hyyppä, J.

2017-10-01

Biodiversity is commonly referred to as species diversity but in forest ecosystems variability in structural and functional characteristics can also be treated as measures of biodiversity. Small unmanned aerial vehicles (UAVs) provide a means for characterizing forest ecosystem with high spatial resolution, permitting measuring physical characteristics of a forest ecosystem from a viewpoint of biodiversity. The objective of this study is to examine the applicability of photogrammetric point clouds and hyperspectral imaging acquired with a small UAV helicopter in mapping biodiversity indicators, such as structural complexity as well as the amount of deciduous and dead trees at plot level in southern boreal forests. Standard deviation of tree heights within a sample plot, used as a proxy for structural complexity, was the most accurately derived biodiversity indicator resulting in a mean error of 0.5 m, with a standard deviation of 0.9 m. The volume predictions for deciduous and dead trees were underestimated by 32.4 m3/ha and 1.7 m3/ha, respectively, with standard deviation of 50.2 m3/ha for deciduous and 3.2 m3/ha for dead trees. The spectral features describing brightness (i.e. higher reflectance values) were prevailing in feature selection but several wavelengths were represented. Thus, it can be concluded that structural complexity can be predicted reliably but at the same time can be expected to be underestimated with photogrammetric point clouds obtained with a small UAV. Additionally, plot-level volume of dead trees can be predicted with small mean error whereas identifying deciduous species was more challenging at plot level.

Direct damage to vegetation caused by acid rain and polluted cloud: definition of critical levels for forest trees.

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Cape, J N

1993-01-01

The concept of critical levels was developed in order to define short-term and long-term average concentrations of gaseous pollutants above which plants may be damaged. Although the usual way in which pollutants in precipitation (wet deposition) influence vegetation is by affecting soil processes, plant foliage exposed to fog and cloud, which often contain much greater concentrations of pollutant ions than rain, may be damaged directly. The idea of a critical level has been extended to define concentrations of pollutants in wet deposition above which direct damage to plants is likely. Concentrations of acidity and sulphate measured in mountain and coastal cloud are summarised. Vegetation at risk of injury is identified as montane forest growing close to the cloud base, where ion concentrations are highest. The direct effects of acidic precipitation on trees are reviewed, based on experimental exposure of plants to simulated acidic rain, fog or mist. Although most experiments have reported results in terms of pH (H(+) concentration), the accompanying anion is important, with sulphate being more damaging than nitrate. Both conifers and broadleaved tree seedlings showing subtle changes in the structural characteristics of leaf surfaces after exposure to mist or rain at or about pH 3.5, or sulphate concentration of 150 micromol litre(-1). Visible lesions on leaf surfaces occur at around pH 3 (500 micromol litre(-1) sulphate), broadleaved species tending to be more sensitive than conifers. Effects on photosynthesis and water relations, and interactions with other stresses (e.g. frost), have usually been observed only for treatments which have also caused visible injury to the leaf surface. Few experiments on the direct effects of polluted cloud have been conducted under field conditions with mature trees, which unlike seedlings in controlled conditions, may suffer a growth reduction in the absence of visible injury. Although leaching of cations (Ca(2+), Mg(2+), K(+)) is

Rainfall, fog and throughfall dynamics in a sub-tropical ridge-top cloud forest, National Park of Garajonay (La Gomera, Canary Islands, Spain)

NARCIS (Netherlands)

García-Santos, G.; Bruijnzeel, L.A.

2011-01-01

Mixed tree-heath/beech forest is a type of subtropical montane cloud forest found on wind- and fog-exposed ridges in the Canary Islands. With a dry season of 5 months and an annual precipitation of 600-700 mm, the extra water inputs through fog interception assume particular importance in this

Response of epiphytic bryophytes to simulated N deposition in a subtropical montane cloud forest in southwestern China.

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Song, Liang; Liu, Wen-Yao; Ma, Wen-Zhang; Qi, Jin-Hua

2012-11-01

A field manipulation experiment was conducted in a subtropical montane cloud forest in southwestern China to determine the possible responses of epiphytic bryophytes to increasing nitrogen (N) deposition from community to physiology level, and to find sensitive epiphytic bryophytes that may be used as indicators for assessing the degree of N pollution. N addition had significantly negative effects on species richness and cover of the epiphytic bryophyte community. Harmful effects of high N loads were recorded for chlorophyll, growth, and vitality of the species tested. The decline of some epiphytic bryophytes may result from detrimental effects on degradation to photosynthetic pigments. Bazzania himalayana (Mitt.) Schiffn., Bazzania ovistipula (Steph.) Mizut., and Homaliodendron flabellatum (Sm.) Fleisch. are candidates in atmospheric nitrogen monitoring. Epiphytic bryophytes in the montane cloud forest are very sensitive to increasing N deposition and often difficult to recover once they have been destroyed, providing early detection of enhanced N pollution for trees or even the whole forest ecosystem. The inference that increasing N pollution may lead to loss of biodiversity is a concern to the developing economy in western China, and should alert the government to the adverse impacts caused by increased industrial pollution during the process of China's West Development.

Forests of hope: Costa Rica. Restoring hope in the clouds.

Science.gov (United States)

Bowen, L

1996-01-01

The rapid population growth in Central America has created pressure on the largest tract of cloud forest spanning the Talamanca Mountains in Costa Rica and Panama. Of immediate concern is restoring hope in the forest and improving the standard of living among local people. Such is the goal of the Amistad Conservation and Development (AMISCONDE) project in the communities of Cerro Punta, Panama, and San Rafael in Costa Rica. Through agriculture, forestry, animal husbandry, environmental education, and community development, AMISCONDE aims to restore the degraded lands in the reserve's buffer zone and improve the income of the people. All the local people, the farmers, women and children have benefited from the project. Some of the activities carried out to meet its objectives include helping the farmers improve the productivity and marketability of their products by teaching them new technologies and giving agricultural credits to farmers, women, and youth groups. In addition, AMISCONDE conducts training courses to address the economic, social and educational needs of women and communities. It is assured that the community and the group will be prepared to continue on their own after the official AMISCONDE office is gone.

Biology and Ecology of Alchisme grossa in a Cloud Forest of the Bolivian Yungas

OpenAIRE

Torrico-Bazoberry, Daniel; Caceres-Sanchez, Liliana; Saavedra-Ulloa, Daniela; Flores-Prado, Luis; Niemeyer, Hermann M.; Pinto, Carlos F.

2014-01-01

Treehoppers (Membracidae) exhibit different levels of sociality, from solitary to presocial. Although they are one of the best biological systems to study the evolution of maternal care in insects, information on the biology of species in this group is scarce. This work describes the biology and ecology of Alchisme grossa (Fairmaire) (Hemiptera: Membracidae) in a rain cloud forest of Bolivia. This subsocial membracid utilizes two host-plant species, Brugmansia suaveolens (Humb. & Bonpl. ex Wi...

Nematode parasites of marsupials and small rodents from the Brazilian Atlantic Forest in the State of Rio de Janeiro, Brazil

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Delir Corrêa Gomes

2003-12-01

Full Text Available Nematodes from opossums and rodents captured in the Brazilian Atlantic Forest in the State of Rio de Janeiro, Brazil were studied. From the opossums Didelphis aurita Weid-Neuweid, 1826 and Philander opossum (Linnaeus, 1758 the following nematode species were recovered: Viannaia hamata Travassos, 1914, Aspidodera raillieti Travassos, 1913, Cruzia tentaculata (Rudolphi, 1819, Travassos, 1917, Turgida turgida (Rudolphi, 1819 Travassos, 1919, Gongylonemoides marsupialis (Vaz & Pereira, 1934 Freitas & Lent, 1937, Viannaia viannai Travassos, 1914, Spirura guianensis (Ortlepp, 1924 Chitwood, 1938 and from the rodents Akodon cursor (Winger, 1887, Nectomys squamipes (Brants, 1827, Oligoryzomys eliurus (Wagner, 1845 and Oryzomys intermedius (Leche, 1886: Hassalstrongylus epsilon (Travassos, 1937 Durette-Desset, 1971, Syphacia obvelata (Rudolphi, 1802 Seurat, 1916, S. venteli Travassos, 1937, Physaloptera bispiculata Vaz & Pereira, 1935, Litomosoides carinii (Travassos, 1919 Vaz, 1934, Viannaia viannai, Hassalstrongylus epsilon, H. zeta (Travassos, 1937 Durette-Desset, 1971, Stilestrongylus aculeata (Travassos, 1918 Durette-Desset, 1971 S. eta (Travassos, 1937 Durette-Desset, 1971. Highest worm burdens and prevalences were those related to Cruzia tentaculata in marsupials. Stilestrongylus aculeata was referred for the first time in Akodon cursor.

Diet of a sigmodontine rodent assemblage in a Peruvian montane forest.

Science.gov (United States)

Sahley, Catherine Teresa; Cervantes, Klauss; Pacheco, Victor; Salas, Edith; Paredes, Diego; Alonso, Alfonso

2015-09-29

Knowledge of feeding habits of small rodents is necessary for understanding food webs, trophic structure, and plant-animal interactions in Neotropical forests. Despite several studies that have investigated community structure and feeding behavior of rodents, large gaps remain in our understanding of their guild occupancy. Our objective was to investigate the diets of 7 species of small (de los hábitos alimenticios de roedores pequeños es necesario para comprender cadenas alimenticias, estructura trófica, e interacciones planta-animal en los bosques neotropicales. A pesar de que numerosos estudios han investigado la estructura de comunidades y el comportamiento de forrajeo en roedores, aún existen grandes vacíos en nuestra comprensión de sus gremios tróficos. Nuestro objetivo fue investigar las dietas de siete especies de pequeños (de roedores capturados entre el 2009 y el 2012. Datos de frecuencia para cuatro categorías de dieta indicaron que las siete especies de roedores consumieron cuatro categorías de dieta: artrópodos (88%), pedazos de hojas y fibras de plantas (61%), semillas intactas (con o sin pulpa de frutos; 50%), y esporas de micorrizas (45%). Omnivoría fue la estrategia utilizada por todas las especies, aunque el análisis con tablas de contingencia reveló diferencias significativas entre y dentro de especies en categorías de dieta. El análisis de agrupación presentó 2 grupos principales: el grupo Thomasomys spp. y Calomys sorellus , que incluye una gran proporción de semillas intactas, y partes de plantas en las muestras fecales y el grupo que incluye los géneros Akodon , Microryzomys y Oligoryzomys , el cual incluyó una proporción mayor de artrópodos en sus muestras fecales, pero con niveles altos de semillas intactas. Semillas intactas de al menos 17 especies de plantas (9 familias) fueron encontradas en las muestras fecales. Concluimos que este ensamble de roedores sigmodontinos es omnívoro y que probablemente las especies

Spatiotemporal variation of mosquito diversity (Diptera: Culicidae) at places with different land-use types within a neotropical montane cloud forest matrix.

Science.gov (United States)

Abella-Medrano, Carlos Antonio; Ibáñez-Bernal, Sergio; MacGregor-Fors, Ian; Santiago-Alarcon, Diego

2015-09-24

Land-use change has led to a dramatic decrease in total forest cover, contributing to biodiversity loss and changes of ecosystems' functions. Insect communities of medical importance can be favored by anthropogenic alterations, increasing the risk of novel zoonotic diseases. The response of mosquito (Diptera: Culicidae) abundance and richness to five land-use types (shade coffee plantation, cattle field, urban forest, peri-urban forest, well-preserved montane cloud forest) and three seasons ("dry", "rainy" and "cold") embedded in a neotropical montane cloud forest landscape was evaluated. Standardized collections were performed using 8 CDC miniature black-light traps, baited with CO2 throughout the year. Generalized additive mixed models were used to describe the seasonal and spatial trends of both species richness and abundance. Rank abundance curves and ANCOVAs were used to detect changes in the spatial and temporal structure of the mosquito assemblage. Two cluster analyses were conducted, using 1-βsim and the Morisita-Horn index to evaluate species composition shifts based on incidences and abundances. A total of 2536 adult mosquitoes were collected, belonging to 9 genera and 10 species; the dominant species in the study were: Aedes quadrivittatus, Wyeomyia adelpha, Wy. arthrostigma, and Culex restuans. Highest richness was recorded in the dry season, whereas higher abundance was detected during the rainy season. The urban forest had the highest species richness (n = 7) when compared to all other sites. Species composition cluster analyses show that there is a high degree of similarity in species numbers across sites and seasons throughout the year. However, when considering the abundance of such species, the well-preserved montane cloud forest showed significantly higher abundance. Moreover, the urban forest is only 30 % similar to other sites in terms of species abundances, indicating a possible isolating role of the urban environment. Mosquito

Epidemiology of Leptospira Transmitted by Rodents in Southeast Asia

Science.gov (United States)

Mielcarek, Mathilde; Tatard, Caroline; Chaval, Yannick; Suputtamongkol, Yupin; Buchy, Philippe; Jittapalapong, Sathaporn; Herbreteau, Vincent; Morand, Serge

2014-01-01

Background Leptospirosis is the most common bacterial zoonoses and has been identified as an important emerging global public health problem in Southeast Asia. Rodents are important reservoirs for human leptospirosis, but epidemiological data is lacking. Methodology/Principal Findings We sampled rodents living in different habitats from seven localities distributed across Southeast Asia (Thailand, Lao PDR and Cambodia), between 2009 to 2010. Human isolates were also obtained from localities close to where rodents were sampled. The prevalence of Leptospira infection was assessed by real-time PCR using DNA extracted from rodent kidneys, targeting the lipL32 gene. Sequencing rrs and secY genes, and Multi Locus Variable-number Tandem Repeat (VNTR) analyses were performed on DNA extracted from rat kidneys for Leptospira isolates molecular typing. Four species were detected in rodents, L. borgpetersenii (56% of positive samples), L. interrogans (36%), L. kirschneri (3%) and L. weilli (2%), which were identical to human isolates. Mean prevalence in rodents was approximately 7%, and largely varied across localities and habitats, but not between rodent species. The two most abundant Leptospira species displayed different habitat requirements: L. interrogans was linked to humid habitats (rice fields and forests) while L. borgpetersenii was abundant in both humid and dry habitats (non-floodable lands). Conclusion/Significance L. interrogans and L. borgpetersenii species are widely distributed amongst rodent populations, and strain typing confirmed rodents as reservoirs for human leptospirosis. Differences in habitat requirements for L. interrogans and L. borgpetersenii supported differential transmission modes. In Southeast Asia, human infection risk is not only restricted to activities taking place in wetlands and rice fields as is commonly accepted, but should also include tasks such as forestry work, as well as the hunting and preparation of rodents for consumption, which

Impact of deforestation in the Amazon basin on cloud climatology.

Science.gov (United States)

Wang, Jingfeng; Chagnon, Frédéric J F; Williams, Earle R; Betts, Alan K; Renno, Nilton O; Machado, Luiz A T; Bisht, Gautam; Knox, Ryan; Bras, Rafael L

2009-03-10

Shallow clouds are prone to appear over deforested surfaces whereas deep clouds, much less frequent than shallow clouds, favor forested surfaces. Simultaneous atmospheric soundings at forest and pasture sites during the Rondonian Boundary Layer Experiment (RBLE-3) elucidate the physical mechanisms responsible for the observed correlation between clouds and land cover. We demonstrate that the atmospheric boundary layer over the forested areas is more unstable and characterized by larger values of the convective available potential energy (CAPE) due to greater humidity than that which is found over the deforested area. The shallow convection over the deforested areas is relatively more active than the deep convection over the forested areas. This greater activity results from a stronger lifting mechanism caused by mesoscale circulations driven by deforestation-induced heterogeneities in land cover.

A macroecological glance at the structure of late Miocene rodent assemblages from Southwest Europe

Science.gov (United States)

Cano, Ana Rosa Gómez; Cantalapiedra, Juan L.; Álvarez-Sierra, M. Ángeles; Fernández, Manuel Hernández

2014-10-01

Deep-time perspectives in macroecology are essential with regard to understanding the impact of climate forcing on faunal communities. Using late Miocene rodent faunas (12 to 5 Ma) from two different biogeographical provinces from southwestern Europe, we asked whether the waxing and waning of faunas with dissimilar ecological affinities tracked climate in different ways. The latest middle Miocene featured a fauna dominated by dormice with forest and mixed-habitat affinities. This group declined towards the Upper Miocene. Rodent taxa with the highest values of richness at the beginning of the Upper Miocene are generalists in the southern province and specialists of forested habitats in the northern province. Finally, we identified a third, increasingly significant group of rodents linked to open landscapes towards the end of the Miocene. These three broad ecological groups showed differential responses to a complex set of interconnected circumstances, including the biogeographic structure of the study area and climatic changes throughout time.

an ecological study on rodents of natural vegetation and farm lands ...

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Population density of rodents was high in the bush land and forest habitats. Plant matters were the most ... The area is characterized by a mild sub-tropical temperature range of ..... habitat in structuring small mammal commu- nities in a tropical ...

Hunting, Food Preparation, and Consumption of Rodents in Lao PDR.

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Kanokwan Suwannarong

Full Text Available A cross-sectional study was conducted in 29 villages of Khamkeuth District in Bolikhamxay Province in the Lao PDR during March to May 2013. The study aimed to determine the characteristics associated with rodent consumption and related behaviors among different ethnic groups, ages, and genders. Five-hundred-eighty-four (584 males and females from 18-50 years of age participated in this study. Half of them were Hmong (292, 50% while 152 respondents were Lao-Tai (26% or other ethnic groups (140, 24%. Most of the respondents (79.5% had farming as their main occupation. Prevalences of the studied outcomes were high: 39.9 for hunting or capturing rodents in the previous year, 77.7% for preparing rodents as food, and 86.3% for rodent consumption. Multivariable logistic regression analysis showed that likelihood of these types of rodent contact was more consistently associated with behavioral factors (gathering things from the forest and elsewhere, cultivation-related activities, and taking measures to prevent rodent-borne disease than with socio-demographic, environmental, or cultural factors. The strongest associations were observed for gathering things; these associations were consistently positive and statistically significant. Although this study did not directly assess rodent-borne zoonosis risk, we believe that study findings raise concern that such risk may be substantial in the study area and other similar areas. Further epidemiological studies on the association between rodent-borne disease infection and rodent hunting, preparation for food, and consumption are recommended. Moreover, further studies are needed on the association between these potential exposure factors (i.e., rodent hunting, preparation for food, and consumption and rodent-borne infections, especially among ethnic groups like the Hmong in Lao PDR and those in neighboring countries with similar socio-demographic, environmental, behavioral and cultural contexts.

Herbivory enhances the resistance of mangrove forest to cordgrass invasion.

Science.gov (United States)

Zhang, Yihui; Meng, Hanyu; Wang, Yi; He, Qiang

2018-06-01

The biotic resistance hypothesis proposes that biotic interactions, such as competition and herbivory, resist the establishment and spread of non-native species. The relative and interactive role of competition and herbivory in resisting plant invasions, however, remains poorly understood. We investigated the interactive role of competition and herbivory (by the native rodent Rattus losea) in resisting Spartina alterniflora (cordgrass) invasions into mangrove forests. In southern China, although exotic cordgrass numerically dominates intertidal mudflats and open gaps in mangrove forests, intact forests appear to be highly resistant to cordgrass invasion. A field transplant and rodent exclusion experiment showed that while the impact of rodent grazing on cordgrass was weak on mangrove forest edges and open mudflats, rodent grazing strongly suppressed cordgrass in mangrove understory habitats. A greenhouse experiment confirmed a synergistic interaction between grazing and light availability (a proxy for mangrove shading and light competition) in suppressing cordgrass establishment, with the strongest impacts of grazing in low light conditions that likely weakened cordgrass to survive and resprout. When both were present, as in mangrove understory habitats, grazing and low light acted in concert to eliminate cordgrass establishment, resulting in resistance of mangrove forests to cordgrass invasion. Our results reveal that grazing by native herbivores can enhance the resistance of mangrove forests to cordgrass invasion in southern China, and suggest that investigating multifactor interactions may be critical to understanding community resistance to exotic invasions. © 2018 by the Ecological Society of America.

Infection of Rodents by Orientia tsutsugamushi, the Agent of Scrub Typhus in Relation to Land Use in Thailand

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Kittipong Chaisiri

2017-10-01

Full Text Available The relationship between land use structures and occurrence of scrub typhus agent, Orientia tsutsugamushi infection in small wild mammals was conducted in three provinces of Thailand: Buriram, Loei, and Nan. Orientia tsutsugamushi detection was performed using 16S ribosomal DNA (rDNA amplicon sequencing approach using Miseq Illumina platform. In total, 387 animals (rodents and shrews were examined for the bacterium infection. The 16S rDNA sequences of the bacterium were found in nine animals from Bandicota savilei, Berylmys bowersi, Leopoldamys edwardsi, Rattus exulans, R. tanezumi, and Rattus sp. phylogenetic clade 3, yielding 2.3% infection rate, with two new rodent species infected by the bacterium in Thailand: B. bowersi and L. edwardsi. Using a Generalized Linear Mixed Model (GLMM and Random Forest analyses for investigating the association between human-land use and occurrence of the bacterium, forest habitat appeared as a strong explicative variable of rodent infection, meaning that O. tsutsugamushi-infected animals were more likely found in forest-covered habitats. In terms of public health implementation, our results suggest that heterogenous forested areas including forest-converted agricultural land, reforestation areas, or fallow are potential habitats for O. tsutsugamushi transmission. Further understanding of population dynamics of the vectors and their hosts in these habitats could be beneficial for the prevention of this neglected zoonotic disease.

Remarkable fly (Diptera) diversity in a patch of Costa Rican cloud forest: Why inventory is a vital science

Science.gov (United States)

All flies (Diptera) collected for one year from a four-hectare (150 X 266 meter) patch of cloud forest at 1600 meters above sea level at Zurquí de Moravia, San José Province, Costa Rica (hereafter referred to as Zurquí), revealed an astounding 4,348 species. These amount to more than half the number...

Birds of a high-altitude cloud forest in Alta Verapaz, Guatemala

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Knut Eisermann

2005-09-01

Full Text Available The Northern Central American Highlands have been recognized as endemic bird area, but little is known about bird communities in Guatemalan cloud forests. From 1997 to 2001 a total of 142 bird species were recorded between 2 000 and 2 400 masl in cloud forest and agricultural clearings on Montaña Caquipec (Alta Verapaz, Guatemala. The bird community is described based on line transect counts within the forest. Pooling census data from undisturbed and disturbed forest, the Gray-breasted Wood-Wren (Henicorhina leucophrys was found to be the most abundant species, followed in descending order by the Common Bush-Tanager (Chlorospingus ophthalmicus, the Paltry Tyrannulet (Zimmerius vilissimus, the Yellowish Flycatcher (Empidonax flavescens, the Ruddy-capped Nightingale-Thrush (Catharus frantzii, and the Amethyst-throated Hummingbird (Lampornis amethystinus. Bird communities in undisturbed and disturbed forest were found to be similar (Sørensen similarity index 0.85, indicating low human impact. Of all recorded species, ~27% were Nearctic-Neotropical migratory birds. The most abundant one was the Wilson’s Warbler (Wilsonia pusilla. The Montaña Caquipec is an important area for bird conservation, which is indicated by the presence of four species listed in the IUCN Red List (Highland Guan Penelopina nigra, Resplendent Quetzal Pharomachrus mocinno, Pink-headed Warbler Ergaticus versicolor, Golden-cheeked Warbler Dendroica chrysoparia, and 42 Mesoamerican endemics, of which 14 species are endemic to the Central American Highlands. The results presented here will be useful as baseline data for a long-term monitoring. Rev. Biol. Trop. 53(3-4: 577-594. Epub 2005 Oct 3.Las alturas del norte de Centroamérica han sido reconocidas como región de aves endémicas, pero se conoce poco sobre las comunidades de aves en bosques nubosos de Guatemala. De 1997 a 2001 se han detectado 142 especies de aves entre 2 000 y 2 400 msnm en el bosque nuboso y áreas agr

Thieving rodents as substitute dispersers of megafaunal seeds

Science.gov (United States)

Jansen, Patrick A.; Hirsch, Ben T.; Emsens, Willem-Jan; Zamora-Gutierrez, Veronica; Wikelski, Martin; Kays, Roland

2012-01-01

The Neotropics have many plant species that seem to be adapted for seed dispersal by megafauna that went extinct in the late Pleistocene. Given the crucial importance of seed dispersal for plant persistence, it remains a mystery how these plants have survived more than 10,000 y without their mutualist dispersers. Here we present support for the hypothesis that secondary seed dispersal by scatter-hoarding rodents has facilitated the persistence of these large-seeded species. We used miniature radio transmitters to track the dispersal of reputedly megafaunal seeds by Central American agoutis, which scatter-hoard seeds in shallow caches in the soil throughout the forest. We found that seeds were initially cached at mostly short distances and then quickly dug up again. However, rather than eating the recovered seeds, agoutis continued to move and recache the seeds, up to 36 times. Agoutis dispersed an estimated 35% of seeds for >100 m. An estimated 14% of the cached seeds survived to the next year, when a new fruit crop became available to the rodents. Serial video-monitoring of cached seeds revealed that the stepwise dispersal was caused by agoutis repeatedly stealing and recaching each other’s buried seeds. Although previous studies suggest that rodents are poor dispersers, we demonstrate that communities of rodents can in fact provide highly effective long-distance seed dispersal. Our findings suggest that thieving scatter-hoarding rodents could substitute for extinct megafaunal seed dispersers of tropical large-seeded trees. PMID:22802644

Interactions between payments for hydrologic services, landowner decisions, and ecohydrological consequences: synergies and disconnection in the cloud forest zone of central Veracruz, Mexico

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Heidi Asbjornsen

2017-06-01

hydrologic services and people's decisions, behavior, and knowledge regarding forest conservation and water. Using central Veracruz as our case study, we identify areas of both synchrony and disconnection between PHS goals and outcomes. Mature and regenerating cloud forests (targeted by PHS were found to produce enhanced hydrologic services relative to areas converted to pasture, including reduced peak flows during large rain events and maintenance of dry-season base flows. However, unexpectedly, these hydrologic benefits from cloud forests were not necessarily greater than those from other vegetation types. Consequently, the location of forests in strategic watershed positions (e.g., where deforestation risk or hydrologic recharge are high may be more critical than forest type in promoting hydrologic functions within watersheds and should be considered when targeting PHS payments. While our results suggest that participation in PHS improved the level of knowledge among watershed inhabitants about forest-water relationships, a mismatch existed between payment amounts and landowner opportunity costs, which may contribute to the modest success in targeting priority areas within watersheds. Combined, these findings underscore the complexity of factors that influence motivations for PHS participation and land use decisions and behavior, and the importance of integrating understanding of both ecohydrological and socioeconomic dynamics into PHS design and implementation. We conclude by identifying opportunities for improving the design of PHS programs and recommending priority areas for future research and monitoring, both in Mexico and globally.

Tropical Montane Cloud Forests: Hydrometeorological variability in three neighbouring catchments with different forest cover

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Ramírez, Beatriz H.; Teuling, Adriaan J.; Ganzeveld, Laurens; Hegger, Zita; Leemans, Rik

2017-09-01

Mountain areas are characterized by a large heterogeneity in hydrological and meteorological conditions. This heterogeneity is currently poorly represented by gauging networks and by the coarse scale of global and regional climate and hydrological models. Tropical Montane Cloud Forests (TMCFs) are found in a narrow elevation range and are characterized by persistent fog. Their water balance depends on local and upwind temperatures and moisture, therefore, changes in these parameters will alter TMCF hydrology. Until recently the hydrological functioning of TMCFs was mainly studied in coastal regions, while continental TMCFs were largely ignored. This study contributes to fill this gap by focusing on a TMCF which is located on the northern eastern Andes at an elevation of 1550-2300 m asl, in the Orinoco river basin highlands. In this study, we describe the spatial and seasonal meteorological variability, analyse the corresponding catchment hydrological response to different land cover, and perform a sensitivity analysis on uncertainties related to rainfall interpolation, catchment area estimation and streamflow measurements. Hydro-meteorological measurements, including hourly solar radiation, temperature, relative humidity, wind speed, precipitation, soil moisture and streamflow, were collected from June 2013 to May 2014 at three gauged neighbouring catchments with contrasting TMCF/grassland cover and less than 250 m elevation difference. We found wetter and less seasonally contrasting conditions at higher elevations, indicating a positive relation between elevation and fog or rainfall persistence. This pattern is similar to that of other eastern Andean TMCFs, however, the study site had higher wet season rainfall and lower dry season rainfall suggesting that upwind contrasts in land cover and moisture can influence the meteorological conditions at eastern Andean TMCFs. Contrasting streamflow dynamics between the studied catchments reflect the overall system response

Inventory of rodent damage to forests

Czech Academy of Sciences Publication Activity Database

Kamler, Jiří; Turek, K.; Homolka, Miloslav; Baňař, P.; Barančeková, Miroslava; Heroldová, Marta; Krojerová, Jarmila; Suchomel, J.; Purchart, L.

2011-01-01

Roč. 57, č. 5 (2011), s. 219-225 ISSN 1212-4834 R&D Projects: GA MZe QH72075 Institutional research plan: CEZ:AV0Z60930519 Keywords : bank vole * field vole * bark damage * forest protection Subject RIV: GK - Forestry http://www.agriculturejournals.cz/publicFiles/40074.pdf

Comparison of passive fog gauges for determining fog duration and fog interception by a Puerto Rican elfin cloud forest

NARCIS (Netherlands)

Holwerda, F; Bruijnzeel, L.A.; Scatena, F.N.

2011-01-01

Between 5 March and 10 May 2001, the performance of three types of passive fog gauges (wire harp WH, standard fog collector SC and Juvik gauge JU) was compared at a wind-exposed Puerto Rican elfin cloud forest site. The gauges were used to determine the timing and duration of fog, as well as

Diversity and habitat differentiation of mosses and liverworts in the cloud forest of. Monteverde, Costa Rica

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Gradstein S. Rob

2001-07-01

Full Text Available An inventory of the understory and canopy of 4 ha oflower montane cloud forest at Monteverde, Costa Rica, yielded 190 bryophyte species: 133 hepatics, 56 mosses and 1 homwort. Thick branches of the lower canopy were by far the richest habitat in terms of number of species (99, trunks from 1m upwards had 65 species, lianas, shrubs, saplings, or living leaves in the understory had about 36-46 species each, and 16 species were found on rotten logs. The figures are illustrative of the great diversification of microhabitats of bryophytes in a tropical montane cloud forest. About 36% ofthe species, including more than half ofthe corticolous ones, occurred exclusively in the canopy. It appeared thatthe percentage ofbryophyte species restricted to the canopy may be the same in lowland and montane rain forests, in spite of the great differences in species abundance and composition in the two kinds of forest.  Ciento noventa especies de briofitas (133 hepáticas, 56 musgos, 1 antocerote fueron encontradas en un inventario hecho en 4 hectáreas del sotobosque y el dosel en el bosque nublado (1500 m de Monteverde, Costa Rica. Las ramas gruesas del dosel fueron la porción más rica en termino de numero de especies (99, en troncos había 65 especies, lianas, arbustos, árboles juveniles o hojas vivas en el sotobosque tenían entre 36-46 especies cada una, y 16 especies fueron encontradas en troncos en descomposición. Las cifras ilustran la gran diversidad de microhabitats de briofitas en el bosque nublado. Cerca de 36% de las especies, incluyendo mas de la mitad de los corticolos, se presentaron exclusivamente en el dosel. Parece que el porcentaje de especies de briofitas restringidas al dosel podría ser el mismo en bosques de tierras bajas y en bosques nublados, a pesar de la gran diferencia en abundancia y composición taxonómica de las briofitas en las dos clases de bosque.

Xeromorphic traits help to maintain photosynthesis in the perhumid climate of a Taiwanese cloud forest.

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Pariyar, Shyam; Chang, Shih-Chieh; Zinsmeister, Daniel; Zhou, Haiyang; Grantz, David A; Hunsche, Mauricio; Burkhardt, Juergen

2017-07-01

Previous flux measurements in the perhumid cloud forest of northeastern Taiwan have shown efficient photosynthesis of the endemic tree species Chamaecyparis obtusa var. formosana even under foggy conditions in which leaf surface moisture would be expected. We hypothesized this to be the result of 'xeromorphic' traits of the Chamaecyparis leaves (hydrophobicity, stomatal crypts, stomatal clustering), which could prevent coverage of stomata by precipitation, fog, and condensation, thereby maintaining CO 2 uptake. Here we studied the amount, distribution, and composition of moisture accumulated on Chamaecyparis leaf surfaces in situ in the cloud forest. We studied the effect of surface tension on gas penetration to stomata using optical O 2 microelectrodes in the laboratory. We captured the dynamics of condensation to the leaf surfaces with an environmental scanning electron microscope (ESEM). In spite of substantial surface hydrophobicity, the mean water film thickness on branchlets under foggy conditions was 80 µm (upper surface) and 40 µm (lower surface). This amount of water could cover stomata and prevent CO 2 uptake. This is avoided by the clustered arrangement of stomata within narrow clefts and the presence of Florin rings. These features keep stomatal pores free from water due to surface tension and provide efficient separation of plant and atmosphere in this perhumid environment. Air pollutants, particularly hygroscopic aerosol, may disturb this functionality by enhancing condensation and reducing the surface tension of leaf surface water.

Climatic Characteristics of the Subtropical Mountainous Cloud Forest at the Yuanyang Lake Long-Term Ecological Research Site, Taiwan

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I-Ling Lai

2006-12-01

Full Text Available To better understand the climatic characteristics in a subtropical mountainous cloud forest at the Yuanyang Lake long-term ecological research site, weather data collected from January 1994 to December 2004 were analyzed in the present study. The obvious seasonal changes in climatic factors were observed at this site. The annual mean air temperature was 12.7°C. The lowest temperature was recorded in February (monthly mean 5.9°C, and the highest one was taken in July (monthly mean 18.1°C. Winter featured light rain with a prolonged occurrence of fog, resulting in a large reduction of radiation. In summer, fog occurred once in the early morning and the other time from afternoon to evening. The latter one was associated with the wind direction changes and usually accompanied with short moderate to heavy convective rain. Consequently the photosynthetic photon flux density (PPFD was high in the morning but reduced drastically in the afternoon. Typhoons occurred in the summer had contributed to 37% of the annual rainfall, usually resulting in torrential rain events and sharp increases in the water level of this lake. As a matter of fact, perhumid environment of this site was attributed to abundant rainfall (mean annual precipitation 3396 mm and high frequency (up to 40% of foggy time. Such conditions would reduce the intensity of solar radiation and PPFD. The average annual solar radiation at the site was 2475 MJ m-2, and annual PPFD was 5713 mol m-2. The average degree of reduction of PPFD under foggy condition was up to 88%. Such climatic characteristics are suggested to constrain the growth of plants and play an important role in competition among plant species in this cloud forest. It is considered that the distinct seasonal fluctuation in environmental factors, perhumid and dim light conditions are the most distinguished characteristics of this subtropical mountainous cloud forest ecosystem.

SPECIES-SPECIFIC FOREST VARIABLE ESTIMATION USING NON-PARAMETRIC MODELING OF MULTI-SPECTRAL PHOTOGRAMMETRIC POINT CLOUD DATA

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J. Bohlin

2012-07-01

Full Text Available The recent development in software for automatic photogrammetric processing of multispectral aerial imagery, and the growing nation-wide availability of Digital Elevation Model (DEM data, are about to revolutionize data capture for forest management planning in Scandinavia. Using only already available aerial imagery and ALS-assessed DEM data, raster estimates of the forest variables mean tree height, basal area, total stem volume, and species-specific stem volumes were produced and evaluated. The study was conducted at a coniferous hemi-boreal test site in southern Sweden (lat. 58° N, long. 13° E. Digital aerial images from the Zeiss/Intergraph Digital Mapping Camera system were used to produce 3D point-cloud data with spectral information. Metrics were calculated for 696 field plots (10 m radius from point-cloud data and used in k-MSN to estimate forest variables. For these stands, the tree height ranged from 1.4 to 33.0 m (18.1 m mean, stem volume from 0 to 829 m3 ha-1 (249 m3 ha-1 mean and basal area from 0 to 62.2 m2 ha-1 (26.1 m2 ha-1 mean, with mean stand size of 2.8 ha. Estimates made using digital aerial images corresponding to the standard acquisition of the Swedish National Land Survey (Lantmäteriet showed RMSEs (in percent of the surveyed stand mean of 7.5% for tree height, 11.4% for basal area, 13.2% for total stem volume, 90.6% for pine stem volume, 26.4 for spruce stem volume, and 72.6% for deciduous stem volume. The results imply that photogrammetric matching of digital aerial images has significant potential for operational use in forestry.

Input of trace substances to coniferous forests by fog interception at high elevations of Black Forest

International Nuclear Information System (INIS)

Winkler, P.; Pahl, S.

1993-10-01

The deposition of trace substances to a coniferous forest has been estimated by means of a one-dimensional cloud droplet deposition model. For a period of 21 months the liquid water content has been measured and 89 samples of cloud water from the weather station Feldberg have been analysed for chemical composition. These data and meteorological routine observations have been used as input parameters for the deposition model. Deposition calculations to a 40 years old coniferous forest for the period 1982-1991 showed that the cloud water deposition amounts to 33% of the precipitation amount on the average and varies between 23 and 43% in single years. The highest cloud water deposition rates occur during fall and winter. The trace substance concentration in cloud water has been found to be higher than in precipitation, by a factor between 6 and 12, depending on the type of ions. Typically seasonal variations of normalized ion concentrations could be shown to exist as well as dependencies on wind direction. Air mass transport from the industries of the Stuttgart area resulted in higher trace substance concentrations in cloud water. The deposition of trace substances via fog interception during the summer months is as high and in the winter months higher than that by wet deposition. The forests at high elevations of Black Forest are charged appreciably by fog interception. (orig.). 31 figs., 5 tabs., 39 refs [de

Characteristics of fog and fogwater fluxes in a Puerto Rican elfin cloud

NARCIS (Netherlands)

Eugster, W.; Burkard, R.; Holwerda, F.; Scatena, F.N.; Bruijnzeel, L.A.

2006-01-01

The Luquillo Mountains of northeastern Puerto Rico harbours important fractions of tropical montane cloud forests. Although it is well known that the frequent occurrence of dense fog is a common climatic characteristic of cloud forests around the world, it is poorly understood how fog processes

Trophic Niche Differentiation in Rodents and Marsupials Revealed by Stable Isotopes.

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Mauro Galetti

Full Text Available Tropical rainforests support the greatest diversity of small mammals in the world, yet we have little understanding about the mechanisms that promote the coexistence of species. Diet partitioning can favor coexistence by lessening competition, and interspecific differences in body size and habitat use are usually proposed to be associated with trophic divergence. However, the use of classic dietary methods (e.g. stomach contents is challenging in small mammals, particularly in community-level studies, thus we used stable isotopes (δ13C and δ15N to infer about trophic niche. We investigated i how trophic niche is partitioned among rodent and marsupial species in three Atlantic forest sites and ii if interspecific body size and locomotor habit inequalities can constitute mechanisms underlying the isotopic niche partitioning. We found that rodents occupied a broad isotopic niche space with species distributed in different trophic levels and relying on diverse basal carbon sources (C3 and C4 plants. Surprisingly, on the other hand, marsupials showed a narrow isotopic niche, both in δ13C and δ15N dimensions, which is partially overlapped with rodents, contradicting their description as omnivores and generalists proposed classic dietary studies. Although body mass differences did not explained the divergence in isotopic values among species, groups of species with different locomotor habit presented clear differences in the position of the isotopic niche space, indicating that the use of different forest strata can favor trophic niche partitioning in small mammals communities. We suggest that anthropogenic impacts, such as habitat modification (logging, harvesting, can simplify the vertical structure of ecosystems and collapse the diversity of basal resources, which might affect negatively small mammals communities in Atlantic forests.

A microhistological technique for analysis of food habits of mycophagous rodents.

Science.gov (United States)

Patrick W. McIntire; Andrew B. Carey

1989-01-01

We present a technique, based on microhistological analysis of fecal pellets, for quantifying the diets of forest rodents. This technique provides for the simultaneous recording of fungal spores and vascular plant material. Fecal samples should be freeze dried, weighed, and rehydrated with distilled water. We recommend a minimum sampling intensity of 50 fields of view...

Parameterized approximation of lacunarity functions derived from airborne laser scanning point clouds of forested areas

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Székely, Balázs; Kania, Adam; Varga, Katalin; Heilmeier, Hermann

2017-04-01

Lacunarity, a measure of the spatial distribution of the empty space is found to be a useful descriptive quantity of the forest structure. Its calculation, based on laser-scanned point clouds, results in a four-dimensional data set. The evaluation of results needs sophisticated tools and visualization techniques. To simplify the evaluation, it is straightforward to use approximation functions fitted to the results. The lacunarity function L(r), being a measure of scale-independent structural properties, has a power-law character. Previous studies showed that log(log(L(r))) transformation is suitable for analysis of spatial patterns. Accordingly, transformed lacunarity functions can be approximated by appropriate functions either in the original or in the transformed domain. As input data we have used a number of laser-scanned point clouds of various forests. The lacunarity distribution has been calculated along a regular horizontal grid at various (relative) elevations. The lacunarity data cube then has been logarithm-transformed and the resulting values became the input of parameter estimation at each point (point of interest, POI). This way at each POI a parameter set is generated that is suitable for spatial analysis. The expectation is that the horizontal variation and vertical layering of the vegetation can be characterized by this procedure. The results show that the transformed L(r) functions can be typically approximated by exponentials individually, and the residual values remain low in most cases. However, (1) in most cases the residuals may vary considerably, and (2) neighbouring POIs often give rather differing estimates both in horizontal and in vertical directions, of them the vertical variation seems to be more characteristic. In the vertical sense, the distribution of estimates shows abrupt changes at places, presumably related to the vertical structure of the forest. In low relief areas horizontal similarity is more typical, in higher relief areas

Quantifying Sediment Transport in a Premontane Transitional Cloud Forest

Science.gov (United States)

Waring, E. R.; Brumbelow, J. K.

2013-12-01

Quantifying sediment transport is a difficult task in any watershed, and relatively little direct measurement has occurred in tropical, mountainous watersheds. The Howler Monkey Watershed (2.2 hectares) is located in a premontane transitional cloud forest in San Isidro de Peñas Blancas, Costa Rica. In June 2012, a V-notch stream-gaging weir was built in the catchment with a 8 ft by 6 ft by 4 ft concrete stilling basin. Sediment captured by the weir was left untouched for an 11 month time period. To collect the contents of the weir, the stream was rerouted and the weir was drained. The stilling basin contents were systematically sampled, and samples were taken to a lab and characterized using sieve and hydrometer tests. The wet volume of the remaining sediment was obtained, and dry mass was estimated. Particle size distribution of samples were obtained from lab tests, with 96% of sediment trapped by the weir being sand or coarser. The efficiency of the weir as a sediment collector was evaluated by comparing particle fall velocities to residence time of water in the weir under baseflow conditions. Under these assumptions, only two to three percent of the total mass of soil transported in the stream is thought to have been suspended in the water and lost over the V-notch. Data were compared to the Universal Soil Loss Equation (USLE), a widely accepted method for predicting soil loss in agricultural watersheds. As expected, application of the USLE to a tropical rainforest was problematic with uncertainty in parameters yielding a soil loss estimate varying by a factor of 50. Continued monitoring of sediment transport should yield data for improved methods of soil loss estimation applicable to tropical mountainous forests.

Remarkable fly (Diptera) diversity in a patch of Costa Rican cloud forest: Why inventory is a vital science

Science.gov (United States)

Art Borkent; Brian V. Brown; Peter H. Adler; Dalton de Souza Amorim; Kevin Barber; Daniel Bickel; Stephanie Boucher; Scott E. Brooks; John Burger; Zelia L. Burington; Renato S. Capellari; Daniel N. R. Costa; Jeffrey M. Cumming; Greg Curler; Carl W. Dick; John H. Epler; Eric Fisher; Stephen D. Gaimari; Jon Gelhaus; David A. Grimaldi; John Hash; Martin Hauser; Heikki Hippa; Sergio Ibanez-Bernal; Mathias Jaschhof; Elena P. Kameneva; Peter H. Kerr; Valery Korneyev; Cheslavo A. Korytkowski; Giar-Ann Kung; Gunnar Mikalsen Kvifte; Owen Lonsdale; Stephen A. Marshall; Wayne N. Mathis; Verner Michelsen; Stefan Naglis; Allen L. Norrbom; Steven Paiero; Thomas Pape; Alessandre Pereira-Colavite; Marc Pollet; Sabrina Rochefort; Alessandra Rung; Justin B. Runyon; Jade Savage; Vera C. Silva; Bradley J. Sinclair; Jeffrey H. Skevington; John O. Stireman; John Swann; F. Christian Thompson; Pekka Vilkamaa; Terry Wheeler; Terry Whitworth; Maria Wong; D. Monty Wood; Norman Woodley; Tiffany Yau; Thomas J. Zavortink; Manuel A. Zumbado

2018-01-01

Study of all flies (Diptera) collected for one year from a four-hectare (150 x 266 meter) patch of cloud forest at 1,600 meters above sea level at Zurquí de Moravia, San José Province, Costa Rica (hereafter referred to as Zurquí), revealed an astounding 4,332 species. This amounts to more than half the number of named species of flies for all of Central America....

The effect of the tropical cloud (fog) forest on the spatial distribution of cesium-137 in soils in the Henri Pittier National Park (Edo, Aragua, Venezuela)

International Nuclear Information System (INIS)

LaBrecque, J.J.; Rosales, P.A.; Cordoves, P.R.

2002-01-01

Soils were collected at different elevations (m.a.s.l.) near the two roadways, that pass through the Henri Pittier National Park (Edo, Aragua, Venezuela) in order to determine the distribution of the concentrations of the 137 Cs fallout and its relation to the tropical cloud forest. Duplicate samples were taken at most elevations between 2-5 cm below the soil surface to confirm that the samples were representative of the area. In many cases, it was difficult or impossible to locate areas that were undisturbed by man or nature. The 137 Cs (Bq/kg) content was determined by conventional high resolution gamma ray spectroscopy employing a standard comparison method. The background of the 137 Cs fallout in soils, below the cloud (fog) baseline was calculated to be about 5 Bq/kg on both the south (land) side and north (ocean) side for both roadways. The concentrations of 137 Cs (Bq/kg) were between 2-3 times higher at the baseline of the cloud (fog) on both sides of the mountain range. The 137 Cs values at the highest elevations (1105 and 1625 m.a.s.l.) near the roadways were about 5-6 times higher than the determined background levels. Our estimates of the baseline of the cloud (fog) are in good agreement with other visual observations. It was concluded that the distribution of 137 Cs in soils in cloud forests can be employed to estimate the baseline and the concentrations of 137 Cs fallout can be related to the relative density of the cloud (fog) when it was deposited. (author)

Comparison of Laser and Stereo Optical, SAR and InSAR Point Clouds from Air- and Space-Borne Sources in the Retrieval of Forest Inventory Attributes

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Xiaowei Yu

2015-11-01

Full Text Available It is anticipated that many of the future forest mapping applications will be based on three-dimensional (3D point clouds. A comparison study was conducted to verify the explanatory power and information contents of several 3D remote sensing data sources on the retrieval of above ground biomass (AGB, stem volume (VOL, basal area (G, basal-area weighted mean diameter (Dg and Lorey’s mean height (Hg at the plot level, utilizing the following data: synthetic aperture radar (SAR Interferometry, SAR radargrammetry, satellite-imagery having stereo viewing capability, airborne laser scanning (ALS with various densities (0.8–6 pulses/m2 and aerial stereo imagery. Laser scanning is generally known as the primary source providing a 3D point cloud. However, photogrammetric, radargrammetric and interferometric techniques can be used to produce 3D point clouds from space- and air-borne stereo images. Such an image-based point cloud could be utilized in a similar manner as ALS providing that accurate digital terrain model is available. In this study, the performance of these data sources for providing point cloud data was evaluated with 91 sample plots that were established in Evo, southern Finland within a boreal forest zone and surveyed in 2014 for this comparison. The prediction models were built using random forests technique with features derived from each data sources as independent variables and field measurements of forest attributes as response variable. The relative root mean square errors (RMSEs varied in the ranges of 4.6% (0.97 m–13.4% (2.83 m for Hg, 11.7% (3.0 cm–20.6% (5.3 cm for Dg, 14.8% (4.0 m2/ha–25.8% (6.9 m2/ha for G, 15.9% (43.0 m3/ha–31.2% (84.2 m3/ha for VOL and 14.3% (19.2 Mg/ha–27.5% (37.0 Mg/ha for AGB, respectively, depending on the data used. Results indicate that ALS data achieved the most accurate estimates for all forest inventory attributes. For image-based 3D data, high-altitude aerial images and WorldView-2

FOREST Unbiased Galactic plane Imaging survey with the Nobeyama 45 m telescope (FUGIN). III. Possible evidence for formation of NGC 6618 cluster in M 17 by cloud-cloud collision

Science.gov (United States)

Nishimura, Atsushi; Minamidani, Tetsuhiro; Umemoto, Tomofumi; Fujita, Shinji; Matsuo, Mitsuhiro; Hattori, Yusuke; Kohno, Mikito; Yamagishi, Mitsuyoshi; Tsuda, Yuya; Kuriki, Mika; Kuno, Nario; Torii, Kazufumi; Tsutsumi, Daichi; Okawa, Kazuki; Sano, Hidetoshi; Tachihara, Kengo; Ohama, Akio; Fukui, Yasuo

2018-05-01

We present 12CO (J = 1-0), 13CO (J = 1-0), and C18O (J = 1-0) images of the M 17 giant molecular clouds obtained as part of the FUGIN (FOREST Ultra-wide Galactic Plane Survey In Nobeyama) project. The observations cover the entire area of the M 17 SW and M 17 N clouds at the highest angular resolution (˜19″) to date, which corresponds to ˜0.18 pc at the distance of 2.0 kpc. We find that the region consists of four different velocity components: a very low velocity (VLV) clump, a low velocity component (LVC), a main velocity component (MVC), and a high velocity component (HVC). The LVC and the HVC have cavities. Ultraviolet photons radiated from NGC 6618 cluster penetrate into the N cloud up to ˜5 pc through the cavities and interact with molecular gas. This interaction is correlated with the distribution of young stellar objects in the N cloud. The LVC and the HVC are distributed complementarily after the HVC is displaced by 0.8 pc toward the east-southeast direction, suggesting that collision of the LVC and the HVC created the cavities in both clouds. The collision velocity and timescale are estimated to be 9.9 km s-1 and 1.1 × 105 yr, respectively. The high collision velocity can provide a mass accretion rate of up to 10^{-3} M_{⊙}yr-1, and the high column density (4 × 1023 cm-2) might result in massive cluster formation. The scenario of cloud-cloud collision likely explains well the stellar population and the formation history of the NGC 6618 cluster proposed by Hoffmeister et al. (2008, ApJ, 686, 310).

Accumulation of radioactivity in mushrooms and its relation with the mycophagous rodents biology in an Abies religiosa forest

International Nuclear Information System (INIS)

Valenzuela G, V.H.

2001-01-01

Nowadays the society expresses its concern by the action of the nuclear energy with respect to installations safety, the transport of radioactive materials, the radioactive waste management, nuclear accidents and nuclear tests. The concern is based to the fear of radioactive explosion which contaminates the environment and the damages to the public health. The mathematical models which establish and define the behavior and the exposure conditions of radioactive substances in the human beings as well as the systematic deposit in the terrestrial surface of the particles suspended in the air which contain radioactive material are called fallout, that is a contamination indicator. The objective of this work is to identify the little rodents species with greater accumulation of radionuclides of artificial origin. Due to the mushrooms are good bio indicators of radioactive contamination and the rodents consume them often, both are of greater assistance as indicators of this type of contamination and contribute to the knowledge of the 137 Cs and 40 K dynamics at the forest system. This work forms part of the environmental radiological surveillance of the Mexican Nuclear Center (CNM) in which are analysed several samples which will be used as biological indicators of radioactive contamination which serve for the transfer coefficient calculations of the different routes by which the radiation can to arrive to the human being, being able to be evaluated the dose to the people who live at the CNM surrounding area. Due to not always it is possible to detect so lowest levels of radioactivity in some environmental samples (air, water and, foods) it is necessary to quantify them in other animals or plants which accumulate them. (Author)

Foliar uptake, carbon fluxes and water status are affected by the timing of daily fog in saplings from a threatened cloud forest.

Science.gov (United States)

Berry, Z Carter; White, Joseph C; Smith, William K

2014-05-01

In cloud forests, foliar uptake (FU) of water has been reported for numerous species, possibly acting to relieve daily water and carbon stress. While the prevalence of FU seems common, how daily variation in fog timing may affect this process has not been studied. We examined the quantity of FU, water potentials, gas exchange and abiotic variation at the beginning and end of a 9-day exposure to fog in a glasshouse setting. Saplings of Abies fraseri (Pursh) Poir. and Picea rubens Sarg. were exposed to morning (MF), afternoon (AF) or evening fog (EF) regimes to assess the ability to utilize fog water at different times of day and after sustained exposure to simulated fog. The greatest amount of FU occurred during MF (up to 50%), followed by AF (up to 23%) and then EF, which surprisingly had no FU. There was also a positive relationship between leaf conductance and FU, suggesting a role of stomata in FU. Moreover, MF and AF lead to the greatest improvements in daily water balance and carbon gain, respectively. Foliar uptake was important for improving plant ecophysiology but was influenced by diurnal variation in fog. With climate change scenarios predicting changes to cloud patterns and frequency that will likely alter diurnal patterns, cloud forests that rely on this water subsidy could be affected. © The Author 2014. Published by Oxford University Press. All rights reserved.

Andes virus infections in the rodent reservoir and in humans vary across contrasting landscapes in Chile

Science.gov (United States)

Torres-Pérez, Fernando; Palma, R. Eduardo; Hjelle, Brian; Ferres, Marcela; Cook, Joseph A.

2009-01-01

Hantavirus cardiopulmonary syndrome (HCPS) is an emerging infectious disease first reported in Chile in 1995. Andes hantavirus (ANDV) is responsible for the more than 500 cases of HCPS reported in Chile. Previous work showed that ANDV is genetically differentiated in Chile across contrasting landscapes. To determine whether the reservoir rodent (Oligoryzomys longicaudatus) populations are also geographically segregated, we conducted range-wide spatial genetic analyses of O. longicaudatus in Chile using the mitochondrial DNA cytochrome b gene. Given that landscape structure influences the incidence of hantavirus infections, we also tested 772 O. longicaudatus specimens for antibodies to ANDV captured during the period 2000 − 2006. Population genetic analyses of O. longicaudatus are largely congruent with those reported for ANDV, with the host primarily differentiated according to three defined ecoregions, Mediterranean, Valdivian rain forest and North Patagonian rain forest. Significant differences in the relative prevalence of anti-ANDV antibodies in rodent samples also were found across the three ecoregions. We relate these results to the number of reported human HCPS cases in Chile, and discuss the importance of landscape differences in light of ANDV transmission to humans and among rodent populations. PMID:19632357

The Green Ocean Amazon Experiment (GoAmazon2014/5) Observes Pollution Affecting Gases, Aerosols, Clouds, and Rainfall over the Rain Forest

Energy Technology Data Exchange (ETDEWEB)

Martin, S. T. [Harvard University, Cambridge, Massachusetts; Artaxo, P. [University of São Paulo, São Paulo, Brazil; Machado, L. [National Institute for Space Research, São José dos Campos, Brazil; Manzi, A. O. [National Institute of Amazonian Research, Manaus, Amazonas, Brazil; Souza, R. A. F. [Amazonas State University, Amazonas, Brazil; Schumacher, C. [Texas A& amp,M University, College Station, Texas; Wang, J. [Brookhaven National Laboratory, Upton, New York; Biscaro, T. [National Institute for Space Research, São José dos Campos, Brazil; Brito, J. [University of São Paulo, São Paulo, Brazil; Calheiros, A. [National Institute for Space Research, São José dos Campos, Brazil; Jardine, K. [Lawrence Berkeley National Lab, Berkeley, California; Medeiros, A. [Amazonas State University, Amazonas, Brazil; Portela, B. [National Institute of Amazonian Research, Manaus, Amazonas, Brazil; de Sá, S. S. [Harvard University, Cambridge, Massachusetts; Adachi, K. [Meteorological Research Institute, Tsukuba, Ibaraki, Japan; Aiken, A. C. [Los Alamos National Laboratory, Los Alamos, New Mexico; Albrecht, R. [University of São Paulo, São Paulo, Brazil; Alexander, L. [Pacific Northwest National Laboratory, Richland, Washington; Andreae, M. O. [Max Planck Institute for Chemistry, Mainz, Germany; Barbosa, H. M. J. [University of São Paulo, São Paulo, Brazil; Buseck, P. [Arizona State University, Tempe, Arizona; Chand, D. [Pacific Northwest National Laboratory, Richland, Washington; Comstock, J. M. [Pacific Northwest National Laboratory, Richland, Washington; Day, D. A. [University of Colorado Boulder, Boulder, Colorado; Dubey, M. [Los Alamos National Laboratory, Los Alamos, New Mexico; Fan, J. [Pacific Northwest National Laboratory, Richland, Washington; Fast, J. [Pacific Northwest National Laboratory, Richland, Washington; Fisch, G. [Aeronautic and Space Institute, São José dos Campos, Brazil; Fortner, E. [Aerodyne, Inc., Billerica, Massachusetts; Giangrande, S. [Brookhaven National Laboratory, Upton, New York; Gilles, M. [Lawrence Berkeley National Lab, Berkeley, California; Goldstein, A. H. [University of California, Berkeley, Berkeley, California; Guenther, A. [University of California, Irvine, Irvine, California; Hubbe, J. [Pacific Northwest National Laboratory, Richland, Washington; Jensen, M. [Brookhaven National Laboratory, Upton, New York; Jimenez, J. L. [University of Colorado Boulder, Boulder, Colorado; Keutsch, F. N. [Harvard University, Cambridge, Massachusetts; Kim, S. [University of California, Irvine, Irvine, California; Kuang, C. [Brookhaven National Laboratory, Upton, New York; Laskin, A. [Pacific Northwest National Laboratory, Richland, Washington; McKinney, K. [Harvard University, Cambridge, Massachusetts; Mei, F. [Pacific Northwest National Laboratory, Richland, Washington; Miller, M. [Rutgers, The State University of New Jersey, New Brunswick, New Jersey; Nascimento, R. [Amazonas State University, Amazonas, Brazil; Pauliquevis, T. [Federal University of São Paulo, São Paulo, Brazil; Pekour, M. [Pacific Northwest National Laboratory, Richland, Washington; Peres, J. [University of São Paulo, São Paulo, Brazil; Petäjä, T. [University of Helsinki, Helsinki, Finland; Pöhlker, C. [Max Planck Institute for Chemistry, Mainz, Germany; Pöschl, U. [Max Planck Institute for Chemistry, Mainz, Germany; Rizzo, L. [Federal University of São Paulo, São Paulo, Brazil; Schmid, B. [Pacific Northwest National Laboratory, Richland, Washington; Shilling, J. E. [Pacific Northwest National Laboratory, Richland, Washington; Dias, M. A. Silva [University of São Paulo, São Paulo, Brazil; Smith, J. N. [University of California, Irvine, Irvine, California; Tomlinson, J. M. [Pacific Northwest National Laboratory, Richland, Washington; Tóta, J. [Federal University of West Para, Santarém, Pará, Brazil; Wendisch, M. [University of Leipzig, Leipzig, Germany

2017-05-01

The Observations and Modeling of the Green Ocean Amazon (GoAmazon2014/5) experiment took place around the urban region of Manaus in central Amazonia across two years. The urban pollution plume was used to study the susceptibility of gases, aerosols, clouds, and rainfall to human activities in a tropical environment. Many aspects of air quality, weather, terrestrial ecosystems, and climate work differently in the tropics than in the more thoroughly studied USA, employed an unparalleled suite of measurements at nine ground sites and onboard two aircraft to investigate the flow of background air into Manaus, the emissions into the air over the city, and the advection of the pollution downwind of the city. Herein, to visualize this train of processes and its effects, observations aboard a low-flying aircraft are presented. Comparative measurements within and adjacent to the plume followed the emissions of biogenic volatile organic carbon compounds (BVOCs) from the tropical forest, their transformations by the atmospheric oxidant cycle, alterations of this cycle by the influence of the pollutants, transformations of the chemical products into aerosol particles, the relationship of these particles to cloud condensation nuclei (CCN) activity, and the differences in cloud properties and rainfall for background compared to polluted conditions. The observations of the GoAmazon2014/5 experiment illustrate how the hydrologic cycle, radiation balance, and carbon recycling may be affected by present-day as well as future economic development and pollution over the Amazonian tropical forest.

Habitat management for red tree voles in Douglas-fir forests.

Science.gov (United States)

M.H. Huff; R.S. Holthausen; K.B. Aubry

1992-01-01

The relations between arboreal rodents and trees causes the animals to be particularly sensitive to the effects of timber harvesting.Among arboreal rodents,we consider the redtree vole to be the most vulnerable to local extinctions resulting from the loss or fragmentation of old-growth Douglas-fir forests. Redtree voles are nocturnal,canopy dwelling, and difficult to...

Leaf gas exchange of understory spruce-fir saplings in relict cloud forests, southern Appalachian Mountains, USA

Energy Technology Data Exchange (ETDEWEB)

Reinhardt, K.; Smith, W.K. [Wake Forest Univ., Winston-Salem, NC (United States). Dept. of Biology

2008-01-15

Global climate change is expected to increase regional cloud ceiling levels in many mountainous forested areas of the world. This study investigated environmental influences on the gas exchange physiology of understory red spruce and Fraser fir trees at 2 sites in the Appalachian mountains. The study hypothesized that the humid, cloudy environment would influence the photosynthetic performance of the trees, and that the species would adapt to low, diffuse light. The study also predicted that leaf conductance to carbon dioxide (CO{sub 2}) would be high as a result of low leaf-to-air-vapour pressure deficit (LAVD). The study demonstrated that leaf conductance decreased exponentially as LAVD increased. Predawn leaf water potentials remained stable, while late afternoon values declined. It was concluded that leaf gas exchange was correlated with the response of leaf conductance and LAVD. The cloudy, humid environment strongly influenced tree leaf gas exchange and water relations. It was suggested that further research is needed to investigate cloud impacts on carbon gain and water relations. 72 refs., 1 tab., 8 figs.

Urban resident attitudes toward rodents, rodent control products, and environmental effects

Science.gov (United States)

Rodent control in urban areas can result in the inadvertent mortality of non-target species (e.g., bobcats). However, there is little detailed information about rodent control practices of urban residents. Our objective was to evaluate urban rodent control behaviors in two area...

Hepatozoon spp. infections in wild rodents in an area of endemic canine hepatozoonosis in southeastern Brazil.

Science.gov (United States)

Demoner, Larissa de Castro; Magro, Natalia Mizuhira; da Silva, Maria Regina Lucas; de Paula Antunes, João Marcelo Azevedo; Calabuig, Cecilia Irene Pérez; O'Dwyer, Lucia Helena

2016-07-01

Hepatozoon canis is a tick-borne parasite that occurs worldwide. In rural areas of Brazil, H. canis vectors remain unknown, which has led to speculation about alternative routes of transmission. Small rodents can play a role in the transmission (via predation) of Hepatozoon americanum, which led us to question whether predation might be an alternative mode of transmission for H. canis. Thus, this study investigated whether Hepatozoon spp. are present in wild small rodents in forest fragments that surround rural areas in Botucatu County, São Paulo, Brazil, where canine hepatozoonosis is endemic. The study included blood samples from 158 dogs, which were screened by microscopy and molecular analysis. Blood samples and tissues from 67 rodents were obtained for histopathology and molecular detection. The prevalence of H. canis was high (66.45%) in dogs from rural areas of Botucatu, São Paulo, Brazil. The molecular analysis showed that wild rodent species in Brazil were infected with Hepatozoon spp. other than H. canis. Therefore, although the hypothesis that sylvatic rodents act as reservoirs for H. canis was not supported, the presence of monozoic cysts in the rodents suggests that, in addition to intermediate hosts, wild small rodents in Brazil might act as paratenic hosts of Hepatozoon spp. because they harbor infective stages for intermediate host predators. Copyright © 2016 Elsevier GmbH. All rights reserved.

Late Quaternary climatic vegetational shifts in an ecological transition zone of northern Madagascar: insights from genetic analyses of two endemic rodent species.

Science.gov (United States)

Rakotoarisoa, J-E; Raheriarisena, M; Goodman, S M

2013-05-01

The Loky-Manambato region, located in northern Madagascar, is a biotically rich contact zone between different forest biomes. Local current forest cover is composed of both humid and dry formations, which show elevational stratification. A recent phylogeographical study of a regional dry forest rodent, Eliurus carletoni (subfamily Nesomyinae), found genetic evidence of forest contractions between 18 750 and 7500 years BP, which based on extrapolation of the pollen subfossil record, was thought to be associated with an expansion of local humid forests. Herein, we conduct a genetic test of this hypothesis and focused on populations on two neighbouring massifs of forest-dependent rodent species, one associated with low-elevation dry forests (E. carletoni) and the other with higher elevation humid forests (Eliurus tanala). Using mitochondrial markers and a combination of traditional and coalescent-based phylogeographical, historical demographic and population genetic methods, we found evidence of historical connections between populations of E. tanala. Adjacent populations of E. carletoni and E. tanala exhibit opposite historical demographic patterns, and for both, evidence suggests that historical demographic events occurred within the last 25 000 years BP. These findings strongly support the proposed late Quaternary shifts in the floristic composition of the Loky-Manambato region. © 2013 The Authors. Journal of Evolutionary Biology © 2013 European Society For Evolutionary Biology.

A mistletoe tale: postglacial invasion of Psittacanthus schiedeanus (Loranthaceae) to Mesoamerican cloud forests revealed by molecular data and species distribution modeling.

Science.gov (United States)

Ornelas, Juan Francisco; Gándara, Etelvina; Vásquez-Aguilar, Antonio Acini; Ramírez-Barahona, Santiago; Ortiz-Rodriguez, Andrés Ernesto; González, Clementina; Mejía Saules, María Teresa; Ruiz-Sanchez, Eduardo

2016-04-12

Ecological adaptation to host taxa is thought to result in mistletoe speciation via race formation. However, historical and ecological factors could also contribute to explain genetic structuring particularly when mistletoe host races are distributed allopatrically. Using sequence data from nuclear (ITS) and chloroplast (trnL-F) DNA, we investigate the genetic differentiation of 31 Psittacanthus schiedeanus (Loranthaceae) populations across the Mesoamerican species range. We conducted phylogenetic, population and spatial genetic analyses on 274 individuals of P. schiedeanus to gain insight of the evolutionary history of these populations. Species distribution modeling, isolation with migration and Bayesian inference methods were used to infer the evolutionary transition of mistletoe invasion, in which evolutionary scenarios were compared through posterior probabilities. Our analyses revealed shallow levels of population structure with three genetic groups present across the sample area. Nine haplotypes were identified after sequencing the trnL-F intergenic spacer. These haplotypes showed phylogeographic structure, with three groups with restricted gene flow corresponding to the distribution of individuals/populations separated by habitat (cloud forest localities from San Luis Potosí to northwestern Oaxaca and Chiapas, localities with xeric vegetation in central Oaxaca, and localities with tropical deciduous forests in Chiapas), with post-glacial population expansions and potentially corresponding to post-glacial invasion types. Similarly, 44 ITS ribotypes suggest phylogeographic structure, despite the fact that most frequent ribotypes are widespread indicating effective nuclear gene flow via pollen. Gene flow estimates, a significant genetic signal of demographic expansion, and range shifts under past climatic conditions predicted by species distribution modeling suggest post-glacial invasion of P. schiedeanus mistletoes to cloud forests. However, Approximate

Wet season water distribution in a tropical Andean cloud forest of Boyacá (Colombia) during the dry climate of El Niño

Science.gov (United States)

Garcia-Santos, G.; Berdugo, M. B.

2010-07-01

Fog has been demonstrated as the only source of moisture during the dry climate of El Niño in the tropical Andean cloud forest of Boyacá region in Colombia, yet its importance for the forest is virtually unknown. We assessed fog water distribution during the wet season inside the forest and outside in a practically deforested area. Water intercepted by plant was measured at different vertical stratus. Soil moisture in the first centimetres was also measured. During the anomalous drier wet season there was lack of rainfall and the total recorded cloud water was lower compared with the same period during the previous year. Our results indicated that the upper part of the forest mass intercepts most of the fog water compared with lower stratus when the fog event starts. However upper most stratus became rapidly drier after the event, which is explained because water is released to the atmosphere due to high heat atmosphere-leaves interface fluctuations caused by wind and solar radiation, flows towards a different water potential and drips from the leaves. Low amount of fog dripped from tree foliage into the soil, indicating a large water storage capacity of the epiphyte and bryophyte vegetation. Despite the small amount of throughfall, understory vegetation and litter remained wet, which might be explained by the water flowing through the epiphyte vegetation or the high capacity of the understory to absorb moisture from the air. Soil water did not infiltrate in depth, which underlines the importance of fog as water and cool source for seedling growth and shallow rooted understory species, especially during drier conditions.

Thermal energetics of the New-Guinean moss-forest rat (Rattus niobe) in comparison with other tropical murid rodents.

Science.gov (United States)

Genoud, Michel

2014-04-01

The thermal energetics of rodents from cool, wet tropical highlands are poorly known. Metabolic rate, body temperature and thermal conductance were measured in the moss-forest rat, Rattus niobe (Rodentia), a small murid endemic to the highlands of New Guinea. These data were evaluated in the context of the variation observed in the genus Rattus and among tropical murids. In 7 adult R. niobe, basal metabolic rate (BMR) averaged 53.6±6.6mLO2h(-1), or 103% of the value predicted for a body mass of 42.3±5.8g. Compared to other species of Rattus, R. niobe combines a low body temperature (35.5±0.6°C) and a moderately low minimal wet thermal conductance cmin (5.88±0.7mLO2h(-1)°C(-1), 95% of predicted) with a small size, all of which lead to reduced energy expenditure in a constantly cool environment. The correlations of mean annual rainfall and temperature, altitude and body mass with BMR, body temperature and cmin were analyzed comparatively among tropical Muridae. Neither BMR, nor cmin or body temperature correlated with ambient temperature or altitude. Some of the factors which promote high BMR in higher latitude habitats, such as seasonal exposure to very low temperature and short reproductive season, are lacking in wet montane tropical forests. BMR increased with rainfall, confirming a pattern observed among other assemblages of mammals. This correlation was due to the low BMR of several desert adapted murids, while R. niobe and other species from wet habitats had a moderate BMR. Copyright © 2014 Elsevier Ltd. All rights reserved.

Forest insect pest management and forest management in China: an overview.

Science.gov (United States)

Ji, Lanzhu; Wang, Zhen; Wang, Xiaowei; An, Linli

2011-12-01

According to the Seventh National Forest Inventory (2004-2008), China's forests cover an area of 195.45 million ha, or 20.36% of the total land area. China has the most rapidly increasing forest resources in the world. However, China is also a country with serious forest pest problems. There are more than 8,000 species of potential forest pests in China, including insects, plant diseases, rodents and lagomorphs, and hazardous plants. Among them, 300 species are considered as economically or ecologically important, and half of these are serious pests, including 86 species of insects. Forest management and utilization have a considerable influence on the stability and sustainability of forest ecosystems. At the national level, forestry policies always play a major role in forest resource management and forest health protection. In this paper, we present a comprehensive overview of both achievements and challenges in forest management and insect pest control in China. First, we summarize the current status of forest resources and their pests in China. Second, we address the theories, policies, practices and major national actions on forestry and forest insect pest management, including the Engineering Pest Management of China, the National Key Forestry Programs, the Classified Forest Management system, and the Collective Forest Tenure Reform. We analyze and discuss three representative plantations-Eucalyptus, poplar and Masson pine plantations-with respect to their insect diversity, pest problems and pest management measures.

Forest Insect Pest Management and Forest Management in China: An Overview

Science.gov (United States)

Ji, Lanzhu; Wang, Zhen; Wang, Xiaowei; An, Linli

2011-12-01

According to the Seventh National Forest Inventory (2004-2008), China's forests cover an area of 195.45 million ha, or 20.36% of the total land area. China has the most rapidly increasing forest resources in the world. However, China is also a country with serious forest pest problems. There are more than 8,000 species of potential forest pests in China, including insects, plant diseases, rodents and lagomorphs, and hazardous plants. Among them, 300 species are considered as economically or ecologically important, and half of these are serious pests, including 86 species of insects. Forest management and utilization have a considerable influence on the stability and sustainability of forest ecosystems. At the national level, forestry policies always play a major role in forest resource management and forest health protection. In this paper, we present a comprehensive overview of both achievements and challenges in forest management and insect pest control in China. First, we summarize the current status of forest resources and their pests in China. Second, we address the theories, policies, practices and major national actions on forestry and forest insect pest management, including the Engineering Pest Management of China, the National Key Forestry Programs, the Classified Forest Management system, and the Collective Forest Tenure Reform. We analyze and discuss three representative plantations— Eucalyptus, poplar and Masson pine plantations—with respect to their insect diversity, pest problems and pest management measures.

Leaf litter copepods from a cloud forest mountain top in Honduras (Copepoda: Cyclopidae, Canthocamptidae).

Science.gov (United States)

Fiers, Frank; Jocque, Merlijn

2013-01-01

Five different species of Copepoda were extracted from a leaf litter sample collected on the top (at 2000 m a.s.l.) of a cloud forested mountain in El Cusuco National Park, Honduras. Three of them, one Cyclopidae and two Canthocamptidae are new to science, and are described herein. Olmeccyclops hondo sp. nov. is the second representative thus far known of this New World genus. Moraria catracha sp. nov. and Moraria cusuca sp. nov. are the first formally described members of the genus occurring in Central America. The concept of a "Moraria-group" is considered to be an artificial grouping and is limited here to the genera Moraria and Morariopsis only. The distributional range of this group is essentially Holarctic, with the mountainous regions in Honduras, and probably in west Nicaragua, as the southernmost limits in the New World.

Detection System of HTTP DDoS Attacks in a Cloud Environment Based on Information Theoretic Entropy and Random Forest

Directory of Open Access Journals (Sweden)

Mohamed Idhammad

2018-01-01

Full Text Available Cloud Computing services are often delivered through HTTP protocol. This facilitates access to services and reduces costs for both providers and end-users. However, this increases the vulnerabilities of the Cloud services face to HTTP DDoS attacks. HTTP request methods are often used to address web servers’ vulnerabilities and create multiple scenarios of HTTP DDoS attack such as Low and Slow or Flooding attacks. Existing HTTP DDoS detection systems are challenged by the big amounts of network traffic generated by these attacks, low detection accuracy, and high false positive rates. In this paper we present a detection system of HTTP DDoS attacks in a Cloud environment based on Information Theoretic Entropy and Random Forest ensemble learning algorithm. A time-based sliding window algorithm is used to estimate the entropy of the network header features of the incoming network traffic. When the estimated entropy exceeds its normal range the preprocessing and the classification tasks are triggered. To assess the proposed approach various experiments were performed on the CIDDS-001 public dataset. The proposed approach achieves satisfactory results with an accuracy of 99.54%, a FPR of 0.4%, and a running time of 18.5s.

The effect of climate and soil conditions on tree species turnover in a Tropical Montane Cloud Forest in Costa Rica.

Science.gov (United States)

Häger, Achim

2010-12-01

On a global level, Tropical Montane Cloud Forests constitute important centers of vascular plant diversity. Tree species turnover along environmental gradients plays an important role in larger scale diversity patterns in tropical mountains. This study aims to estimate the magnitude of beta diversity across the Tilardn mountain range in North-Western Costa Rica, and to elucidate the impact of climate and soil conditions on tree species turnover at a local scale. Seven climate stations measuring rainfall, horizontal precipitation (clouds and wind-driven rain) and temperatures were installed along a 2.5km transect ranging from 1200 m.a.s.l. on the Atlantic to 1200 m.a.s.l. on the Pacific slope. The ridge top climate station was located at 1500 m.a.s.l. Climate data were recorded from March through December 2003. Additionally, seven 0.05 ha plots were established. On all plots soil moisture was monitored for one year, furthermore soil type and soil chemistry were assessed. Woody plants with a diameter at breast height (dbh) > or = 5 cm were identified to species. Species' distributions were explored by feeding pairwise Serensen measures between plots into a Principal Component Analysis. Relationships between floristic similarity and environmental variables were analyzed using Mantel tests. Pronounced gradients in horizontal precipitation, temperatures and soil conditions were found across the transect. In total, 483 woody plants were identified, belonging to 132 species. Environmental gradients were paralleled by tree species turnover; the plots could be divided in three distinctive floristic units which reflected different topographic positions on the transect (lower slopes, mid slopes and ridge). Most notably there was a complete species turnover between the ridge and the lower Pacific slope. Floristic similarity was negatively correlated with differences in elevation, horizontal precipitation, temperatures and soil conditions between plots. It is suggested that

Food habits of rodents inhabiting arid and semi-arid ecosystems of central New Mexico

Science.gov (United States)

Hope, Andrew G.; Parmenter, Robert R.

2007-01-01

In this study, we describe seasonal dietary composition for 15 species of rodents collected in all major habitats on the Sevilleta National Wildlife Refuge (Socorro County) in central New Mexico. A comprehensive literature review of food habits for these species from throughout their distribution also is provided. We collected rodents in the field during winter, spring and late summer in 1998 from six communities: riparian cottonwood forest; piñon-juniper woodland; juniper-oak savanna; mesquite savanna; short-grass steppe; and Chihuahuan Desert scrubland. Rodents included Spermophilus spilosoma (Spotted Ground Squirrel), Perognathus flavescens (Plains Pocket Mouse), Perognathus flavus (Silky Pocket Mouse), Dipodomys merriami (Merriam’s Kangaroo Rat), Dipodomys ordii (Ord’s Kangaroo Rat), Dipodomys spectabilis (Banner-tailed Kangaroo Rat), Reithrodontomys megalotis (Western Harvest Mouse), Peromyscus boylii (Brush Mouse), Peromyscus eremicus (Cactus Mouse), Peromyscus leucopus (White-footed Mouse), Peromyscus truei (Piñon Mouse), Onychomys arenicola (Mearn’s Grasshopper Mouse), Onychomys leucogaster (Northern Grasshopper Mouse), Neotoma albigula/leucodon (White-throated Woodrats), and Neotoma micropus (Southern Plains Woodrat). We collected stomach contents of all species, and cheek-pouch contents of heteromyids, and quantified them in the laboratory. We determined seasonal diets in each habitat by calculating mean percentage volumes of seeds, arthropods and green vegetation (plant leaves and stems) for each species of rodent. Seeds consumed by each rodent were identified to genus, and often species, and quantified by frequency counts. Comparisons of diets between and among species of rodents, seasons, and ecosystems were also examined. We provide an appendix of all plant taxa documented.

Craniodental morphology and systematics of a new family of hystricognathous rodents (Gaudeamuridae from the late eocene and early oligocene of Egypt.

Directory of Open Access Journals (Sweden)

Hesham M Sallam

Full Text Available BACKGROUND: Gaudeamus is an enigmatic hystricognathous rodent that was, until recently, known solely from fragmentary material from early Oligocene sites in Egypt, Oman, and Libya. Gaudeamus' molars are similar to those of the extant cane rat Thryonomys, and multiple authorities have aligned Gaudeamus with Thryonomys to the exclusion of other living and extinct African hystricognaths; recent phylogenetic analyses have, however, also suggested affinities with South American caviomorphs or Old World porcupines (Hystricidae. METHODOLOGY/PRINCIPAL FINDINGS: Here we describe the oldest known remains of Gaudeamus, including largely complete but crushed crania and complete upper and lower dentitions. Unlike younger Gaudeamus species, the primitive species described here have relatively complex occlusal patterns, and retain a number of plesiomorphic features. Unconstrained parsimony analysis nests Gaudeamus and Hystrix within the South American caviomorph radiation, implying what we consider to be an implausible back-dispersal across the Atlantic Ocean to account for Gaudeamus' presence in the late Eocene of Africa. An analysis that was constrained to recover the biogeographically more plausible hypothesis of caviomorph monophyly does not place Gaudeamus as a stem caviomorph, but rather as a sister taxon of hystricids. CONCLUSIONS/SIGNIFICANCE: We place Gaudeamus species in a new family, Gaudeamuridae, and consider it likely that the group originated, diversified, and then went extinct over a geologically brief period of time during the latest Eocene and early Oligocene in Afro-Arabia. Gaudeamurids are the only known crown hystricognaths from Afro-Arabia that are likely to be aligned with non-phiomorph members of that clade, and as such provide additional support for an Afro-Arabian origin of advanced stem and basal crown members of Hystricognathi.

Forest Cover Estimation in Ireland Using Radar Remote Sensing: A Comparative Analysis of Forest Cover Assessment Methodologies

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Devaney, John; Barrett, Brian; Barrett, Frank; Redmond, John; O`Halloran, John

2015-01-01

Quantification of spatial and temporal changes in forest cover is an essential component of forest monitoring programs. Due to its cloud free capability, Synthetic Aperture Radar (SAR) is an ideal source of information on forest dynamics in countries with near-constant cloud-cover. However, few studies have investigated the use of SAR for forest cover estimation in landscapes with highly sparse and fragmented forest cover. In this study, the potential use of L-band SAR for forest cover estimation in two regions (Longford and Sligo) in Ireland is investigated and compared to forest cover estimates derived from three national (Forestry2010, Prime2, National Forest Inventory), one pan-European (Forest Map 2006) and one global forest cover (Global Forest Change) product. Two machine-learning approaches (Random Forests and Extremely Randomised Trees) are evaluated. Both Random Forests and Extremely Randomised Trees classification accuracies were high (98.1–98.5%), with differences between the two classifiers being minimal (forest area and an increase in overall accuracy of SAR-derived forest cover maps. All forest cover products were evaluated using an independent validation dataset. For the Longford region, the highest overall accuracy was recorded with the Forestry2010 dataset (97.42%) whereas in Sligo, highest overall accuracy was obtained for the Prime2 dataset (97.43%), although accuracies of SAR-derived forest maps were comparable. Our findings indicate that spaceborne radar could aid inventories in regions with low levels of forest cover in fragmented landscapes. The reduced accuracies observed for the global and pan-continental forest cover maps in comparison to national and SAR-derived forest maps indicate that caution should be exercised when applying these datasets for national reporting. PMID:26262681

Using transient ERT mapping to monitor infiltration pathways in a semi-arid cloud forest in Oman

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Friesen, J.; Werban, U.; Pohle, M.; Bawain, A.; Hildebrandt, A.; Attinger, S.

2011-12-01

In forests rainfall partitioning provides highly organized rainfall patterns caused by rainfall funneling through vegetation structure. The patterns of rainfall partitioning have already been studied in great detail at a cloud forest enclosure in Dhofar, Oman. How those organized rainfall patterns on the surface advance into the root zone and deeper is the focus of this work. Trees in the Dhofar Mountains function as excellent natural fog catchers that funnel extracted fog water through stemflow directly into the ground. Stemflow may provide a direct pathway from the stem along the roots to deeper soil water reservoirs. By doing so, trees might also contribute to groundwater recharge, and hence deforestation might have a negative effect on the aquifer. Electric resistivity tomography (ERT) has already proven useful for visualization of root water uptake in a tree orchard, by observing local increases of resistivity from soil drying. In our approach we aim at using ERT data for observing the local decrease of resistivity from soil wetting near stems. For this we will use the advantage of ERT to look into the near surface area (down to 3-4m) and deeper subsurface (10-15m). With a large number of subsequent ERT measurements we will obtain a time series of ERT data. Transient ERT data, starting before the monsoon season and ending after the monsoon season, aim at providing information about recharge patterns during and uptake patterns after monsoon. To determine the effect of vegetation we conducted field observation for two land cover types, forest and grassland. The ERT measurements are support by a network of stemflow, throughfall, and rain gage observations. Results already show a clear distinction between grassland and forested land cover.

Atlantic small-mammal: a dataset of communities of rodents and marsupials of the Atlantic forests of South America.

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Bovendorp, Ricardo S; Villar, Nacho; de Abreu-Junior, Edson F; Bello, Carolina; Regolin, André L; Percequillo, Alexandre R; Galetti, Mauro

2017-08-01

The contribution of small mammal ecology to the understanding of macroecological patterns of biodiversity, population dynamics, and community assembly has been hindered by the absence of large datasets of small mammal communities from tropical regions. Here we compile the largest dataset of inventories of small mammal communities for the Neotropical region. The dataset reviews small mammal communities from the Atlantic forest of South America, one of the regions with the highest diversity of small mammals and a global biodiversity hotspot, though currently covering less than 12% of its original area due to anthropogenic pressures. The dataset comprises 136 references from 300 locations covering seven vegetation types of tropical and subtropical Atlantic forests of South America, and presents data on species composition, richness, and relative abundance (captures/trap-nights). One paper was published more than 70 yr ago, but 80% of them were published after 2000. The dataset comprises 53,518 individuals of 124 species of small mammals, including 30 species of marsupials and 94 species of rodents. Species richness averaged 8.2 species (1-21) per site. Only two species occurred in more than 50% of the sites (the common opossum, Didelphis aurita and black-footed pigmy rice rat Oligoryzomys nigripes). Mean species abundance varied 430-fold, from 4.3 to 0.01 individuals/trap-night. The dataset also revealed a hyper-dominance of 22 species that comprised 78.29% of all individuals captured, with only seven species representing 44% of all captures. The information contained on this dataset can be applied in the study of macroecological patterns of biodiversity, communities, and populations, but also to evaluate the ecological consequences of fragmentation and defaunation, and predict disease outbreaks, trophic interactions and community dynamics in this biodiversity hotspot. © 2017 by the Ecological Society of America.

Detection of Single Tree Stems in Forested Areas from High Density ALS Point Clouds Using 3d Shape Descriptors

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Amiri, N.; Polewski, P.; Yao, W.; Krzystek, P.; Skidmore, A. K.

2017-09-01

Airborne Laser Scanning (ALS) is a widespread method for forest mapping and management purposes. While common ALS techniques provide valuable information about the forest canopy and intermediate layers, the point density near the ground may be poor due to dense overstory conditions. The current study highlights a new method for detecting stems of single trees in 3D point clouds obtained from high density ALS with a density of 300 points/m2. Compared to standard ALS data, due to lower flight height (150-200 m) this elevated point density leads to more laser reflections from tree stems. In this work, we propose a three-tiered method which works on the point, segment and object levels. First, for each point we calculate the likelihood that it belongs to a tree stem, derived from the radiometric and geometric features of its neighboring points. In the next step, we construct short stem segments based on high-probability stem points, and classify the segments by considering the distribution of points around them as well as their spatial orientation, which encodes the prior knowledge that trees are mainly vertically aligned due to gravity. Finally, we apply hierarchical clustering on the positively classified segments to obtain point sets corresponding to single stems, and perform ℓ1-based orthogonal distance regression to robustly fit lines through each stem point set. The ℓ1-based method is less sensitive to outliers compared to the least square approaches. From the fitted lines, the planimetric tree positions can then be derived. Experiments were performed on two plots from the Hochficht forest in Oberösterreich region located in Austria.We marked a total of 196 reference stems in the point clouds of both plots by visual interpretation. The evaluation of the automatically detected stems showed a classification precision of 0.86 and 0.85, respectively for Plot 1 and 2, with recall values of 0.7 and 0.67.

Occurrence of Toxoplasma gondii antibodies in wild rodents and marsupials from the Atlantic forest, State of Sao Paulo, Brazil

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Toxoplasma gondii is a protozoan parasite that infects a large spectrum of warm-blooded animals, including humans. Small mammals and rodents play an important role in the epidemiology of T. gondii because they are sources of infection for domestic and feral cats. Serum samples from 151 rodents and 4...

BAECC Biogenic Aerosols - Effects on Clouds and Climate

Energy Technology Data Exchange (ETDEWEB)

Petäjä, Tuukka [Univ. of Helsinki (Finland); Moisseev, Dmitri [Univ. of Helsinki (Finland); Sinclair, Victoria [Univ. of Helsinki (Finland); O' Connor, Ewan J. [Finnish Meteorological Institute, Helsinki (Finland); Manninen, Antti J. [Univ. of Helsinki (Finland); Levula, Janne [Univ. of Helsinki (Finland); Väänänen, Riikka [Univ. of Helsinki (Finland); Heikkinen, Liine [Univ. of Helsinki (Finland); Äijälä, Mikko [Univ. of Helsinki (Finland); Aalto, Juho [Univ. of Helsinki (Finland); Bäck, Jaana [University of Helsinki, Finland

2015-11-01

“Biogenic Aerosols - Effects on Clouds and Climate (BAECC)”, featured the U.S. Department of Energy’s Atmospheric Radiation Measurement (ARM) Program’s 2nd Mobile Facility (AMF2) in Hyytiälä, Finland. It operated for an 8-month intensive measurement campaign from February to September 2014. The main research goal was to understand the role of biogenic aerosols in cloud formation. One of the reasons to perform BAECC study in Hyytiälä was the fact that it hosts SMEAR-II (Station for Measuring Forest Ecosystem-Atmosphere Relations), which is one of the world’s most comprehensive surface in-situ observation sites in a boreal forest environment. The station has been measuring atmospheric aerosols, biogenic emissions and an extensive suite of parameters relevant to atmosphere-biosphere interactions continuously since 1996. The BAECC enables combining vertical profiles from AMF2 with surface-based in-situ SMEAR-II observations and allows the processes at the surface to be directly related to processes occurring throughout the entire tropospheric column. With the inclusion of extensive surface precipitation measurements, and intensive observation periods involving aircraft flights and novel radiosonde launches, the complementary observations of AMF2 and SMEAR-II provide a unique opportunity for investigating aerosol-cloud interactions, and cloud-to-precipitation processes. The BAECC dataset will initiate new opportunities for evaluating and improving models of aerosol sources and transport, cloud microphysical processes, and boundary-layer structures.

Detailed maps of tropical forest types are within reach: forest tree communities for Trinidad and Tobago mapped with multiseason Landsat and multiseason fine-resolution imagery

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Eileen H. Helmer; Thomas S. Ruzycki; Jay Benner; Shannon M. Voggesser; Barbara P. Scobie; Courtenay Park; David W. Fanning; Seepersad. Ramnarine

2012-01-01

Tropical forest managers need detailed maps of forest types for REDD+, but spectral similarity among forest types; cloud and scan-line gaps; and scarce vegetation ground plots make producing such maps with satellite imagery difficult. How can managers map tropical forest tree communities with satellite imagery given these challenges? Here we describe a case study of...

Detecting Forest Cover and Ecosystem Service Change Using ...

African Journals Online (AJOL)

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Mpigi, than in Butambala by 5.99%, disturbed forest was 3%, farm land ... climate change impacts on ecosystem services requires more attention and ... While these conceptual models usually assume relatively a causal-effect ... images with relatively low cloud cover or free-cloud imagery during the time period of interest.

Causal evidence between monsoon and evolution of rhizomyine rodents.

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López-Antoñanzas, Raquel; Knoll, Fabien; Wan, Shiming; Flynn, Lawrence J

2015-03-11

The modern Asian monsoonal systems are currently believed to have originated around the end of the Oligocene following a crucial step of uplift of the Tibetan-Himalayan highlands. Although monsoon possibly drove the evolution of many mammal lineages during the Neogene, no evidence thereof has been provided so far. We examined the evolutionary history of a clade of rodents, the Rhizomyinae, in conjunction with our current knowledge of monsoon fluctuations over time. The macroevolutionary dynamics of rhizomyines were analyzed within a well-constrained phylogenetic framework coupled with biogeographic and evolutionary rate studies. The evolutionary novelties developed by these rodents were surveyed in parallel with the fluctuations of the Indian monsoon so as to evaluate synchroneity and postulate causal relationships. We showed the existence of three drops in biodiversity during the evolution of rhizomyines, all of which reflected elevated extinction rates. Our results demonstrated linkage of monsoon variations with the evolution and biogeography of rhizomyines. Paradoxically, the evolution of rhizomyines was accelerated during the phases of weakening of the monsoons, not of strengthening, most probably because at those intervals forest habitats declined, which triggered extinction and progressive specialization toward a burrowing existence.

Avifauna del bosque mesófilo de montaña del noreste de Hidalgo, México Avifauna of the tropical montane cloud forest of northeastern Hidalgo, Mexico

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Miguel Angel Martínez-Morales

2007-06-01

Full Text Available Este trabajo presenta los resultados de un inventario avifaunístico realizado de 1997 a 1999 en fragmentos de bosque mesófilo de montaña del noreste de Hidalgo, México. Se registraron 41 familias y 181 especies de aves mediante observaciones visuales y auditivas en 2 057 puntos de conteo, lo que representó el 98% de las especies esperadas en el área de estudio, para el período y método de muestreo utilizado. Se detectaron 16 especies restringidas al bosque mesófilo, 11 endémicas de México y 3 de distribución restringida. Adicionalmente, con base en la legislación mexicana vigente, 28 de las especies registradas están incluidas dentro de alguna categoría de riesgo de conservación. Esta comunidad de aves estuvo dominada por especies de aves pequeñas, raras (poco abundantes y residentes. Es probable que las más vulnerables de sufrir extinciones locales sean las especies raras y restringidas al bosque mesófilo, donde están incluidas las 3 especies de distribución restringida (Dendrortyx barbatus, Glaucidium sanchezi y Cyanolyca nana. La avifauna del bosque mesófilo de esta región incluye al 40% de la avifauna estatal, lo que destaca la relevancia de este tipo de vegetación y una urgente necesidad de establecer estrategias de manejo para su conservación.This study shows the results of bird census carried out from 1997 to 1999 in cloud forest fragments of northeastern Hidalgo, Mexico. Forty-one bird families and 181 species were recorded through visual and acoustic detections in 2 057 point counts. This represents 98% of the expected species richness for the sampling period and method used. Sixteen species restricted to the cloud forest were detected, 11 Mexican endemic species, and 3 restricted-range species were recorded. Additionally, 28 species are included within some category of conservation concern according to the present Mexican legislation. This bird community was dominated by small, rare (low in abundance, and

Fogwater Inputs to a Cloud Forest in Puerto Rico

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Eugster, W.; Burkard, R.; Holwerda, F.; Bruijnzeel, S.; Scatena, F. N.; Siegwolf, R.

2002-12-01

Fog is highly persistent at upper elevations of humid tropical mountains and is an important pathway for water and nutrient inputs to mountain forest ecosystems. Measurements of fogwater fluxes were performed in the Luquillo mountains of Puerto Rico using the eddy covariance approach and a Caltech-type active strand cloudwater collector. Rainfall and throughfall were collected between 25 June--7 August 2002. Samples of fog, rain, stemflow and throughfall were analyzed for inorganic ion and stable isotope concentrations (δ18O and δD). Initial results indicate that fog inputs can occur during periods without rain and last for up to several days. The isotope ratios in rainwater and fogwater are rather similar, indicative of the proximity of the Carribbean Sea and the close interrelation between the origins of fog and rain at our experimental site. Largest differences in isotope ratios for fog were found between daytime convective and nighttime stable conditions. Throughfall was always exceeding rainfall, indicating (a) the relevance of fogwater inputs and (b) the potentially significant undersampling of rainfall due to relatively high wind speeds (5.7 m/s mean) and the exposition of our field site close to a mountain ridge. Our size-resolved measurements of cloud droplets (40 size bins between 2 and 50 μm aerodynamic diameter) indicate that the liquid water content of fog in the Luquillo mountains is 5 times higher than previously assumed, and thus does not differ from the values reported from other mountain ranges in other climate zones. Average deposition rates are 0.88 mm and 6.5 mm per day for fog and rain, respectively.

A practical and automated approach to large area forest disturbance mapping with remote sensing.

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Mutlu Ozdogan

Full Text Available In this paper, I describe a set of procedures that automate forest disturbance mapping using a pair of Landsat images. The approach is built on the traditional pair-wise change detection method, but is designed to extract training data without user interaction and uses a robust classification algorithm capable of handling incorrectly labeled training data. The steps in this procedure include: i creating masks for water, non-forested areas, clouds, and cloud shadows; ii identifying training pixels whose value is above or below a threshold defined by the number of standard deviations from the mean value of the histograms generated from local windows in the short-wave infrared (SWIR difference image; iii filtering the original training data through a number of classification algorithms using an n-fold cross validation to eliminate mislabeled training samples; and finally, iv mapping forest disturbance using a supervised classification algorithm. When applied to 17 Landsat footprints across the U.S. at five-year intervals between 1985 and 2010, the proposed approach produced forest disturbance maps with 80 to 95% overall accuracy, comparable to those obtained from traditional approaches to forest change detection. The primary sources of mis-classification errors included inaccurate identification of forests (errors of commission, issues related to the land/water mask, and clouds and cloud shadows missed during image screening. The approach requires images from the peak growing season, at least for the deciduous forest sites, and cannot readily distinguish forest harvest from natural disturbances or other types of land cover change. The accuracy of detecting forest disturbance diminishes with the number of years between the images that make up the image pair. Nevertheless, the relatively high accuracies, little or no user input needed for processing, speed of map production, and simplicity of the approach make the new method especially practical for

Automatic Mapping of Forest Stands Based on Three-Dimensional Point Clouds Derived from Terrestrial Laser-Scanning

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Tim Ritter

2017-07-01

Full Text Available Mapping of exact tree positions can be regarded as a crucial task of field work associated with forest monitoring, especially on intensive research plots. We propose a two-stage density clustering approach for the automatic mapping of tree positions, and an algorithm for automatic tree diameter estimates based on terrestrial laser-scanning (TLS point cloud data sampled under limited sighting conditions. We show that our novel approach is able to detect tree positions in a mixed and vertically structured stand with an overall accuracy of 91.6%, and with omission- and commission error of only 5.7% and 2.7% respectively. Moreover, we were able to reproduce the stand’s diameter in breast height (DBH distribution, and to estimate single trees DBH with a mean average deviation of ±2.90 cm compared with tape measurements as reference.

Individual tree detection in intact forest and degraded forest areas in the north region of Mato Grosso State, Brazilian Amazon

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Santos, E. G.; Jorge, A.; Shimabukuro, Y. E.; Gasparini, K.

2017-12-01

The State of Mato Grosso - MT has the second largest area with degraded forest among the states of the Brazilian Legal Amazon. Land use and land cover change processes that occur in this region cause the loss of forest biomass, releasing greenhouse gases that contribute to the increase of temperature on earth. These degraded forest areas lose biomass according to the intensity and magnitude of the degradation type. The estimate of forest biomass, commonly performed by forest inventory through sample plots, shows high variance in degraded forest areas. Due to this variance and complexity of tropical forests, the aim of this work was to estimate forest biomass using LiDAR point clouds in three distinct forest areas: one degraded by fire, another by selective logging and one area of intact forest. The approach applied in these areas was the Individual Tree Detection (ITD). To isolate the trees, we generated Canopy Height Models (CHM) images, which are obtained by subtracting the Digital Elevation Model (MDE) and the Digital Terrain Model (MDT), created by the cloud of LiDAR points. The trees in the CHM images are isolated by an algorithm provided by the Quantitative Ecology research group at the School of Forestry at Northern Arizona University (SILVA, 2015). With these points, metrics were calculated for some areas, which were used in the model of biomass estimation. The methodology used in this work was expected to reduce the error in biomass estimate in the study area. The cloud points of the most representative trees were analyzed, and thus field data was correlated with the individual trees found by the proposed algorithm. In a pilot study, the proposed methodology was applied generating the individual tree metrics: total height and area of the crown. When correlating 339 isolated trees, an unsatisfactory R² was obtained, as heights found by the algorithm were lower than those obtained in the field, with an average difference of 2.43 m. This shows that the

LATE PLEISTOCENE RODENTS (MAMMALIA: RODENTIA FROM THE BARANICA CAVE NEAR KNJAZEVAC (EASTERN SERBIA: SYSTEMATICS AND PALAEOECOLOGY

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KATARINA BOGICEVIC

2011-07-01

Full Text Available Baranica is a cave in the Balkan mountain range in the eastern part of Serbia. It contains four layers of sediments of Quaternary age. The Upper Pleistocene deposits (layers 2-4 have yielded a rich and diverse assemblage of vertebrate fauna, including fish, amphibians, reptiles, birds, and small and large mammals. In this work, preliminary results of a study of the rodent fauna from the Upper Pleistocene deposits of the Baranica Cave (Knjazevac, eastern Serbia are presented. The fossil material comes from the 1995 archaeological excavation. The remains of 10 rodent species are described herein: Spermophilus cf. citelloides, Castor fiber, Sicista subtilis, Cricetulus migratorius, Cricetus cricetus, Mesocricetus newtoni, Apodemus ex gr. sylvaticus-flavicollis, Spalax leucodon, Dryomys nitedula, and Muscardinus avellanarius. Along with eight vole species, this makes altogether 18 species of rodents found in this locality. Both layers 2 and 4 (layer 3 is very poor in fossils have yielded a rodent fauna typical for the cold periods of the Late Pleistocene on the Balkan Peninsula, with a prevalence of open and steppe inhabitants, but some forest dwellers were also present. The assemblages from these layers are similar, but there are some differences in the composition of the fauna, which may indicate a slight shift towards drier conditions. They have also been compared to rodent associations from some Serbian and Bulgarian localities of the same age and their similarities and differences are discussed. SHORT NOTE-NOTA BREVE

Ecology, Genetic Diversity, and Phylogeographic Structure of Andes Virus in Humans and Rodents in Chile▿

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Medina, Rafael A.; Torres-Perez, Fernando; Galeno, Hector; Navarrete, Maritza; Vial, Pablo A.; Palma, R. Eduardo; Ferres, Marcela; Cook, Joseph A.; Hjelle, Brian

2009-01-01

Andes virus (ANDV) is the predominant etiologic agent of hantavirus cardiopulmonary syndrome (HCPS) in southern South America. In Chile, serologically confirmed human hantavirus infections have occurred throughout a wide latitudinal distribution extending from the regions of Valparaíso (32 to 33°S) to Aysén (46°S) in southern Patagonia. In this study, we found seropositive rodents further north in the Coquimbo region (30°S) in Chile. Rodent seroprevalence was 1.4%, with Oligoryzomys longicaudatus displaying the highest seroprevalence (5.9%), followed by Abrothrix longipilis (1.9%) and other species exhibiting ≤0.6% seropositivity. We sequenced partial ANDV small (S) segment RNA from 6 HCPS patients and 32 rodents of four different species collected throughout the known range of hantavirus infection in Chile. Phylogenetic analyses showed two major ANDV South (ANDV Sout) clades, congruent with two major Chilean ecoregions, Mediterranean (Chilean matorral [shrubland]) and Valdivian temperate forest. Human and rodent samples grouped according to geographic location. Phylogenetic comparative analyses of portions of S and medium segments (encoding glycoproteins Gn and Gc) from a subset of rodent specimens exhibited similar topologies, corroborating two major ANDV Sout clades in Chile and suggesting that yet unknown factors influence viral gene flow and persistence throughout the two Chilean ecoregions. Genetic algorithms for recombination detection identified recombination events within the S segment. Molecular demographic analyses showed that the virus is undergoing purifying selection and demonstrated a recent exponential growth in the effective number of ANDV Sout infections in Chile that correlates with the increased number of human cases reported. Although we determined virus sequences from four rodent species, our results confirmed O. longicaudatus as the primary ANDV Sout reservoir in Chile. While evidence of geographic differentiation exists, a single

Urban forest topographical mapping using UAV LIDAR

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Putut Ash Shidiq, Iqbal; Wibowo, Adi; Kusratmoko, Eko; Indratmoko, Satria; Ardhianto, Ronni; Prasetyo Nugroho, Budi

2017-12-01

Topographical data is highly needed by many parties, such as government institution, mining companies and agricultural sectors. It is not just about the precision, the acquisition time and data processing are also carefully considered. In relation with forest management, a high accuracy topographic map is necessary for planning, close monitoring and evaluating forest changes. One of the solution to quickly and precisely mapped topography is using remote sensing system. In this study, we test high-resolution data using Light Detection and Ranging (LiDAR) collected from unmanned aerial vehicles (UAV) to map topography and differentiate vegetation classes based on height in urban forest area of University of Indonesia (UI). The semi-automatic and manual classifications were applied to divide point clouds into two main classes, namely ground and vegetation. There were 15,806,380 point clouds obtained during the post-process, in which 2.39% of it were detected as ground.

21 CFR 1250.96 - Rodent control.

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2010-04-01

... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Rodent control. 1250.96 Section 1250.96 Food and... SANITATION Sanitation Facilities and Conditions on Vessels § 1250.96 Rodent control. Vessels shall be... of rodent control. ...

Evidence of a reduction in cloud condensation nuclei activity of water-soluble aerosols caused by biogenic emissions in a cool-temperate forest.

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Müller, Astrid; Miyazaki, Yuzo; Tachibana, Eri; Kawamura, Kimitaka; Hiura, Tsutom

2017-08-16

Biogenic organic aerosols can affect cloud condensation nuclei (CCN) properties, and subsequently impact climate change. Large uncertainties exist in how the difference in the types of terrestrial biogenic sources and the abundance of organics relative to sulfate affect CCN properties. For the submicron water-soluble aerosols collected for two years in a cool-temperate forest in northern Japan, we show that the hygroscopicity parameter κ CCN (0.44 ± 0.07) exhibited a distinct seasonal trend with a minimum in autumn (κ CCN  = 0.32-0.37); these κ CCN values were generally larger than that of ambient particles, including water-insoluble fractions. The temporal variability of κ CCN was controlled by the water-soluble organic matter (WSOM)-to-sulfate ratio (R 2  > 0.60), where the significant reduction of κ CCN in autumn was linked to the increased WSOM/sulfate ratio. Positive matrix factorization analysis indicates that α-pinene-derived secondary organic aerosol (SOA) substantially contributed to the WSOM mass (~75%) in autumn, the majority of which was attributable to emissions from litter/soil microbial activity near the forest floor. These findings suggest that WSOM, most likely α-pinene SOA, originated from the forest floor can significantly suppress the aerosol CCN activity in cool-temperate forests, which have implications for predicting climate effects by changes in biogenic emissions in future.

Phylogeny and chronology of the major lineages of New World hystricognath rodents: insights on the biogeography of the Eocene/Oligocene arrival of mammals in South America.

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Voloch, Carolina M; Vilela, Julio F; Loss-Oliveira, Leticia; Schrago, Carlos G

2013-04-22

The hystricognath rodents of the New World, the Caviomorpha, are a diverse lineage with a long evolutionary history, and their representation in South American fossil record begins with their occurrence in Eocene deposits from Peru. Debates regarding the origin and diversification of this group represent longstanding issues in mammalian evolution because early hystricognaths, as well as Platyrrhini primates, appeared when South American was an isolated landmass, which raised the possibility of a synchronous arrival of these mammalian groups. Thus, an immediate biogeographic problem is posed by the study of caviomorph origins. This problem has motivated the analysis of hystricognath evolution with molecular dating techniques that relied essentially on nuclear data. However, questions remain about the phylogeny and chronology of the major caviomorph lineages. To enhance the understanding of the evolution of the Hystricognathi in the New World, we sequenced new mitochondrial genomes of caviomorphs and performed a combined analysis with nuclear genes. Our analysis supports the existence of two major caviomorph lineages: the (Chinchilloidea + Octodontoidea) and the (Cavioidea + Erethizontoidea), which diverged in the late Eocene. The Caviomorpha/phiomorph divergence also occurred at approximately 43 Ma. We inferred that all family-level divergences of New World hystricognaths occurred in the early Miocene. The molecular estimates presented in this study, inferred from the combined analysis of mitochondrial genomes and nuclear data, are in complete agreement with the recently proposed paleontological scenario of Caviomorpha evolution. A comparison with recent studies on New World primate diversification indicate that although the hypothesis that both lineages arrived synchronously in the Neotropics cannot be discarded, the times elapsed since the most recent common ancestor of the extant representatives of both groups are different.

Virtual reality systems for rodents.

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Thurley, Kay; Ayaz, Aslı

2017-02-01

Over the last decade virtual reality (VR) setups for rodents have been developed and utilized to investigate the neural foundations of behavior. Such VR systems became very popular since they allow the use of state-of-the-art techniques to measure neural activity in behaving rodents that cannot be easily used with classical behavior setups. Here, we provide an overview of rodent VR technologies and review recent results from related research. We discuss commonalities and differences as well as merits and issues of different approaches. A special focus is given to experimental (behavioral) paradigms in use. Finally we comment on possible use cases that may further exploit the potential of VR in rodent research and hence inspire future studies.

Tannin concentration enhances seed caching by scatter-hoarding rodents: An experiment using artificial ‘seeds’

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Wang, Bo; Chen, Jin

2008-11-01

Tannins are very common among plant seeds but their effects on the fate of seeds, for example, via mediation of the feeding preferences of scatter-hoarding rodents, are poorly understood. In this study, we created a series of artificial 'seeds' that only differed in tannin concentration and the type of tannin, and placed them in a pine forest in the Shangri-La Alpine Botanical Garden, Yunnan Province of China. Two rodent species ( Apodemus latronum and A. chevrieri) showed significant preferences for 'seeds' with different tannin concentrations. A significantly higher proportion of seeds with low tannin concentration were consumed in situ compared with seeds with a higher tannin concentration. Meanwhile, the tannin concentration was significantly positively correlated with the proportion of seeds cached. The different types of tannin (hydrolysable tannin vs condensed tannin) did not differ significantly in their effect on the proportion of seeds eaten in situ vs seeds cached. Tannin concentrations had no significant effect on the distance that cached seeds were carried, which suggests that rodents may respond to different seed traits in deciding whether or not to cache seeds and how far they will transport seeds.

Forest Cover Mapping in Iskandar Malaysia Using Satellite Data

Science.gov (United States)

Kanniah, K. D.; Mohd Najib, N. E.; Vu, T. T.

2016-09-01

Malaysia is the third largest country in the world that had lost forest cover. Therefore, timely information on forest cover is required to help the government to ensure that the remaining forest resources are managed in a sustainable manner. This study aims to map and detect changes of forest cover (deforestation and disturbance) in Iskandar Malaysia region in the south of Peninsular Malaysia between years 1990 and 2010 using Landsat satellite images. The Carnegie Landsat Analysis System-Lite (CLASlite) programme was used to classify forest cover using Landsat images. This software is able to mask out clouds, cloud shadows, terrain shadows, and water bodies and atmospherically correct the images using 6S radiative transfer model. An Automated Monte Carlo Unmixing technique embedded in CLASlite was used to unmix each Landsat pixel into fractions of photosynthetic vegetation (PV), non photosynthetic vegetation (NPV) and soil surface (S). Forest and non-forest areas were produced from the fractional cover images using appropriate threshold values of PV, NPV and S. CLASlite software was found to be able to classify forest cover in Iskandar Malaysia with only a difference between 14% (1990) and 5% (2010) compared to the forest land use map produced by the Department of Agriculture, Malaysia. Nevertheless, the CLASlite automated software used in this study was found not to exclude other vegetation types especially rubber and oil palm that has similar reflectance to forest. Currently rubber and oil palm were discriminated from forest manually using land use maps. Therefore, CLASlite algorithm needs further adjustment to exclude these vegetation and classify only forest cover.

Ecology, genetic diversity, and phylogeographic structure of andes virus in humans and rodents in Chile.

Science.gov (United States)

Medina, Rafael A; Torres-Perez, Fernando; Galeno, Hector; Navarrete, Maritza; Vial, Pablo A; Palma, R Eduardo; Ferres, Marcela; Cook, Joseph A; Hjelle, Brian

2009-03-01

Andes virus (ANDV) is the predominant etiologic agent of hantavirus cardiopulmonary syndrome (HCPS) in southern South America. In Chile, serologically confirmed human hantavirus infections have occurred throughout a wide latitudinal distribution extending from the regions of Valparaíso (32 to 33 degrees S) to Aysén (46 degrees S) in southern Patagonia. In this study, we found seropositive rodents further north in the Coquimbo region (30 degrees S) in Chile. Rodent seroprevalence was 1.4%, with Oligoryzomys longicaudatus displaying the highest seroprevalence (5.9%), followed by Abrothrix longipilis (1.9%) and other species exhibiting Chile. Phylogenetic analyses showed two major ANDV South (ANDV Sout) clades, congruent with two major Chilean ecoregions, Mediterranean (Chilean matorral [shrubland]) and Valdivian temperate forest. Human and rodent samples grouped according to geographic location. Phylogenetic comparative analyses of portions of S and medium segments (encoding glycoproteins Gn and Gc) from a subset of rodent specimens exhibited similar topologies, corroborating two major ANDV Sout clades in Chile and suggesting that yet unknown factors influence viral gene flow and persistence throughout the two Chilean ecoregions. Genetic algorithms for recombination detection identified recombination events within the S segment. Molecular demographic analyses showed that the virus is undergoing purifying selection and demonstrated a recent exponential growth in the effective number of ANDV Sout infections in Chile that correlates with the increased number of human cases reported. Although we determined virus sequences from four rodent species, our results confirmed O. longicaudatus as the primary ANDV Sout reservoir in Chile. While evidence of geographic differentiation exists, a single cosmopolitan lineage of ANDV Sout remains the sole etiologic agent for HCPS in Chile.

A 50-m forest cover map in Southeast Asia from ALOS/PALSAR and its application on forest fragmentation assessment.

Directory of Open Access Journals (Sweden)

Jinwei Dong

Full Text Available Southeast Asia experienced higher rates of deforestation than other continents in the 1990s and still was a hotspot of forest change in the 2000s. Biodiversity conservation planning and accurate estimation of forest carbon fluxes and pools need more accurate information about forest area, spatial distribution and fragmentation. However, the recent forest maps of Southeast Asia were generated from optical images at spatial resolutions of several hundreds of meters, and they do not capture well the exceptionally complex and dynamic environments in Southeast Asia. The forest area estimates from those maps vary substantially, ranging from 1.73×10(6 km(2 (GlobCover to 2.69×10(6 km(2 (MCD12Q1 in 2009; and their uncertainty is constrained by frequent cloud cover and coarse spatial resolution. Recently, cloud-free imagery from the Phased Array Type L-band Synthetic Aperture Radar (PALSAR onboard the Advanced Land Observing Satellite (ALOS became available. We used the PALSAR 50-m orthorectified mosaic imagery in 2009 to generate a forest cover map of Southeast Asia at 50-m spatial resolution. The validation, using ground-reference data collected from the Geo-Referenced Field Photo Library and high-resolution images in Google Earth, showed that our forest map has a reasonably high accuracy (producer's accuracy 86% and user's accuracy 93%. The PALSAR-based forest area estimates in 2009 are significantly correlated with those from GlobCover and MCD12Q1 at national and subnational scales but differ in some regions at the pixel scale due to different spatial resolutions, forest definitions, and algorithms. The resultant 50-m forest map was used to quantify forest fragmentation and it revealed substantial details of forest fragmentation. This new 50-m map of tropical forests could serve as a baseline map for forest resource inventory, deforestation monitoring, reducing emissions from deforestation and forest degradation (REDD+ implementation, and

Satellite-Observed Vertical Structures of Clouds over the Amazon Basin

Science.gov (United States)

Wu, M.; Lee, J. E.

2017-12-01

The long wet season of the Amazon basin currently plays a critical role in the terrestrial ecosystem, regulating carbon balance and supporting high biodiversity. It has been argued that the land surface processes are important in maintaining high precipitation; yet, how the land-atmosphere interactions modulate the atmospheric processes are not completely understood. As a first step toward solving this problem, here we examine the vertical structures of clouds and the thermodynamics of the atmosphere over the entire basin at the different time of the year. We combine the vertical distribution of cloud water content from CloudSat, and the atmospheric thermodynamic conditions from the ECMWF ERA-interim reanalysis to compare and contrast the atmospheric condition at different time of the year-the wet, dry, and dry-to-wet transition seasons-and in different regions-ever-wet evergreen broadleaf forests, wet evergreen broadleaf forests with a dry season, and dry wooded grasslands/woodlands-following water stress gradient. In the ever-wet and wet regions, a large amount of cloud ice water is present in the upper atmosphere (above 11km) and convective available potential energy (CAPE) is high during the transition season, supporting the claim that the convective activity is strongest during the transition season. In the dry region, there are more cloud water above 8km over woodlands than over wooded grasslands during the dry and transition seasons, indicating the influence of the land cover. We also classified our data following the large-scale circulation pattern, and the CloudSat data support more deep convective activities in the wet and dry regions when the wind blows from the east during the wet and transition seasons. As a next step, we will focus more on linking the cloud structure to the large-scale circulation and surface processes.

Factors affecting patterns of Amblyomma triste (Acari: Ixodidae) parasitism in a rodent host.

Science.gov (United States)

Colombo, Valeria C; Nava, Santiago; Antoniazzi, Leandro R; Monje, Lucas D; Racca, Andrea L; Guglielmone, Alberto A; Beldomenico, Pablo M

2015-07-30

Here we offer a multivariable analysis that explores associations of different factors (i.e., environmental, host parameters, presence of other ectoparasites) with the interaction of Amblyomma triste immature stages and one of its main hosts in Argentina, the rodent Akodon azarae. Monthly and for two years, we captured and sampled rodents at 16 points located at 4 different sites in the Parana River Delta region. The analyses were conducted with Generalized Linear Mixed Models with a negative binomial response (counts of larvae or nymphs). The independent variables assessed were: (a) environmental: trapping year, season, presence of cattle; type of vegetation (natural grassland or implanted forest); rodent abundance; (b) host parameters: body length; sex; body condition; blood cell counts; natural antibody titres; and (c) co-infestation with other ectoparasites: other stage of A. triste; Ixodes loricatus; lice; mites; and fleas. Two-way interaction terms deemed a priori as relevant were also included in the analysis. Larvae were affected by all environmental variables assessed and by the presence of other ectoparasites (lice, fleas and other tick species). Host factors significantly associated with larval count were sex and levels of natural antibodies. Nymphs were associated with season, presence of cattle, body condition, body length and with burdens of I. loricatus. In most cases, the direction and magnitude of the associations were context-dependent (many interaction terms were significant). The findings of greater significance and implications of our study are two. Firstly, as burdens of A. triste larvae and nymphs were greater where cattle were present, and larval tick burdens were higher in implanted forests, silvopastoral practices developing in the region may affect the population dynamics of A. triste, and consequently the eco-epidemiology of Rickettsia parkeri. Secondly, strong associations and numerous interactions with other ectoparasites suggest that

[Characteristics of the distribution of Ixodes persulcatus in the forest-park area of Novosibirsk].

Science.gov (United States)

Sapegina, V F; Dorontsova, V A; Telegin, V I; Ibleva, N G; Dobrotvorskiĭ, A K

1985-01-01

Only one species of ixodid ticks Ixodes persulcatus occurs in the forest-park zone. Conditions of foliage forests with high grass, where occur hosts of all developmental phases of ticks (elks, hares, rodents, insectivores), are most favourable for I. persulcatus. Preimaginal phases of I. persulcatus feed, in general, on dominant species (common shrew, redbacked and narrow-skulled voles, field mouse and northern birch mouse).

Tolerance of frugivorous birds to habitat disturbance in a tropical cloud forest

NARCIS (Netherlands)

Gomes, L.G.L.; Oostra, V.; Nijman, V.; Cleef, A.M.; Kappelle, M.

2008-01-01

In view of the continued decline in tropical forest cover around the globe, forest restoration has become a key tool in tropical rainforest conservation. One of the main - and least expensive - restoration strategies is natural forest regeneration. By aiding forest seed influx both into disturbed

Evaluating the Contribution of Climate Forcing and Forest Dynamics to Accelerating Carbon Sequestration by Forest Ecosystems in the Northeastern U.S.

Energy Technology Data Exchange (ETDEWEB)

Fitzjarrald, David Roy [Atmos Sciences Res Ctr

2013-09-11

We used 10 Hz eddy flux signals and 0.2 Hz incident radiation (global shortwave and PAR) records from Harvard Forest (Massachusetts) and Tapajos National Forest (Brazil) to establish empirical relationships among directly measured cloud type and cover percentage and corresponding PAR fluctuations and its diffuse fraction. In future work such a cloud characterization will be related to water and light use efficiency estimates for each of these ecosystems. We developed empirical relationships to link sky cover type and fraction (measured with the ceilometer) to incident direct and diffuse PAR. We developed a methodology for constructing synthetic incident solar radiation time series based on operational reports of sky cover and cloud type from National Weather Service METAR reports. The aim of this work is to document the temporal and spectral properties radiation incident on the canopy, as a first step toward developing a sky-type parameterization for the net carbon uptake models.

Mapping forest transition trends in Okomu reserve using Landsat ...

African Journals Online (AJOL)

DR. ALEX O. ONOJEGHUO

1 Lancaster Environment Centre, Lancaster University, Lancaster, LA1 4YQ, United ... and improve upon the technical capacity of forest managers to improve forest management. Overall, the .... cloud cover or were totally free of such and acquired within the same season (as was the case in this ... Green (2), red (3) and.

A Comparison of the Pitfall Trap, Winkler Extractor and Berlese Funnel for Sampling Ground-Dwelling Arthropods in Tropical Montane Cloud Forests

Science.gov (United States)

Sabu, Thomas K.; Shiju, Raj T.; Vinod, KV.; Nithya, S.

2011-01-01

Little is known about the ground-dwelling arthropod diversity in tropical montane cloud forests (TMCF). Due to unique habitat conditions in TMCFs with continuously wet substrates and a waterlogged forest floor along with the innate biases of the pitfall trap, Berlese funnel and Winkler extractor are certain to make it difficult to choose the most appropriate method to sample the ground-dwelling arthropods in TMCFs. Among the three methods, the Winkler extractor was the most efficient method for quantitative data and pitfall trapping for qualitative data for most groups. Inclusion of floatation method as a complementary method along with the Winkler extractor would enable a comprehensive quantitative survey of ground-dwelling arthropods. Pitfall trapping is essential for both quantitative and qualitative sampling of Diplopoda, Opiliones, Orthoptera, and Diptera. The Winkler extractor was the best quantitative method for Psocoptera, Araneae, Isopoda, and Formicidae; and the Berlese funnel was best for Collembola and Chilopoda. For larval forms of different insect orders and the Acari, all the three methods were equally effective. PMID:21529148

Cloud attenuation studies of the six major climatic zones of Africa for Ka and V satellite system design

Directory of Open Access Journals (Sweden)

Temidayo Victor Omotosho

2014-01-01

Full Text Available Normal 0 false false false EN-GB X-NONE X-NONE Cloud cover statistics, cloud base and top height, cloud temperature, frequency of precipitation, freezing height, total cloud liquid water content (TCLWC and cloud attenuation data have been obtained for the six major climatic zones of Africa. The present results reveal a strong positive correlation between the monthly distribution of low cloud cover, cloud top height, cloud temperature, and frequency of precipitation in the six zones. The cumulative distribution of the TCLWC derived from radiosonde measurement in each climatic zone shows a departure from the TCLWC recommended by the ITU Study Group 3 data, with an exceedance percentage difference of 32% to 90% occurring 0.01% to 10% of the time. The underestimation of the TCLWC is greatest in the tropical rain forest. A comparison of the cloud attenuation cumulative distribution in the Ka and V bands reveals that the International Telecommunication Union – Region (ITU-R is an intergovernmental organization that develops rain model based on collected data around the world. This model underestimates the cloud attenuation in all of the six climatic zones by 2.0 dB and 4.7 dB for the arid Sahara desert, 1.3 dB and 3.0 dB in semi-arid North Africa, 1.3 dB and 1.5 dB in savannah North Africa, 2.0 dB and 3.6 dB in the tropical rain forest, 1.3 dB and 2.9 dB in savannah South Africa and 0.9 dB and 2.6 dB in semi-arid South Africa, respectively, at 30 and 50 GHz. Overall, the cloud attenuation in the tropical rain-forest zone is very high because of the high annual total cloud cover (98%, high annual frequency of precipitation (4.5, low annual clear sky amount (8%, high cloud depth (10,937 m, high 0°C isotherm height (4.7 km, high TCLWC (4.0 kg/m2 at 0.01% and low seasonal cloud base height (356 m.

A mangrove forest map of China in 2015: Analysis of time series Landsat 7/8 and Sentinel-1A imagery in Google Earth Engine cloud computing platform

Science.gov (United States)

Chen, Bangqian; Xiao, Xiangming; Li, Xiangping; Pan, Lianghao; Doughty, Russell; Ma, Jun; Dong, Jinwei; Qin, Yuanwei; Zhao, Bin; Wu, Zhixiang; Sun, Rui; Lan, Guoyu; Xie, Guishui; Clinton, Nicholas; Giri, Chandra

2017-09-01

Due to rapid losses of mangrove forests caused by anthropogenic disturbances and climate change, accurate and contemporary maps of mangrove forests are needed to understand how mangrove ecosystems are changing and establish plans for sustainable management. In this study, a new classification algorithm was developed using the biophysical characteristics of mangrove forests in China. More specifically, these forests were mapped by identifying: (1) greenness, canopy coverage, and tidal inundation from time series Landsat data, and (2) elevation, slope, and intersection-with-sea criterion. The annual mean Normalized Difference Vegetation Index (NDVI) was found to be a key variable in determining the classification thresholds of greenness, canopy coverage, and tidal inundation of mangrove forests, which are greatly affected by tide dynamics. In addition, the integration of Sentinel-1A VH band and modified Normalized Difference Water Index (mNDWI) shows great potential in identifying yearlong tidal and fresh water bodies, which is related to mangrove forests. This algorithm was developed using 6 typical Regions of Interest (ROIs) as algorithm training and was run on the Google Earth Engine (GEE) cloud computing platform to process 1941 Landsat images (25 Path/Row) and 586 Sentinel-1A images circa 2015. The resultant mangrove forest map of China at 30 m spatial resolution has an overall/users/producer's accuracy greater than 95% when validated with ground reference data. In 2015, China's mangrove forests had a total area of 20,303 ha, about 92% of which was in the Guangxi Zhuang Autonomous Region, Guangdong, and Hainan Provinces. This study has demonstrated the potential of using the GEE platform, time series Landsat and Sentine-1A SAR images to identify and map mangrove forests along the coastal zones. The resultant mangrove forest maps are likely to be useful for the sustainable management and ecological assessments of mangrove forests in China.

Selection and quality assessment of Landsat data for the North American forest dynamics forest history maps of the US

Science.gov (United States)

Schleeweis, Karen; Goward, Samuel N.; Huang, Chengquan; Dwyer, John L.; Dungan, Jennifer L.; Lindsey, Mary A.; Michaelis, Andrew; Rishmawi, Khaldoun; Masek, Jeffery G.

2016-01-01

Using the NASA Earth Exchange platform, the North American Forest Dynamics (NAFD) project mapped forest history wall-to-wall, annually for the contiguous US (1986–2010) using the Vegetation Change Tracker algorithm. As with any effort to identify real changes in remotely sensed time-series, data gaps, shifts in seasonality, misregistration, inconsistent radiometry and cloud contamination can be sources of error. We discuss the NAFD image selection and processing stream (NISPS) that was designed to minimize these sources of error. The NISPS image quality assessments highlighted issues with the Landsat archive and metadata including inadequate georegistration, unreliability of the pre-2009 L5 cloud cover assessments algorithm, missing growing-season imagery and paucity of clear views. Assessment maps of Landsat 5–7 image quantities and qualities are presented that offer novel perspectives on the growing-season archive considered for this study. Over 150,000+ Landsat images were considered for the NAFD project. Optimally, one high quality cloud-free image in each year or a total of 12,152 images would be used. However, to accommodate data gaps and cloud/shadow contamination 23,338 images were needed. In 220 specific path-row image years no acceptable images were found resulting in data gaps in the annual national map products.

A biometric approach to laboratory rodent identification.

Science.gov (United States)

Cameron, Jens; Jacobson, Christina; Nilsson, Kenneth; Rögnvaldsson, Thorsteinn

2007-03-01

Individual identification of laboratory rodents typically involves invasive methods, such as tattoos, ear clips, and implanted transponders. Beyond the ethical dilemmas they may present, these methods may cause pain or distress that confounds research results. The authors describe a prototype device for biometric identification of laboratory rodents that would allow researchers to identify rodents without the complications of other methods. The device, which uses the rodent's ear blood vessel pattern as the identifier, is fast, automatic, noninvasive, and painless.

A possible role of ground-based microorganisms on cloud formation in the atmosphere

Science.gov (United States)

Ekström, S.; Nozière, B.; Hultberg, M.; Alsberg, T.; Magnér, J.; Nilsson, E. D.; Artaxo, P.

2010-01-01

The formation of clouds is an important process for the atmosphere, the hydrological cycle, and climate, but some aspects of it are not completely understood. In this work, we show that microorganisms might affect cloud formation without leaving the Earth's surface by releasing biological surfactants (or biosurfactants) in the environment, that make their way into atmospheric aerosols and could significantly enhance their activation into cloud droplets. In the first part of this work, the cloud-nucleating efficiency of standard biosurfactants was characterized and found to be better than that of any aerosol material studied so far, including inorganic salts. These results identify molecular structures that give organic compounds exceptional cloud-nucleating properties. In the second part, atmospheric aerosols were sampled at different locations: a temperate coastal site, a marine site, a temperate forest, and a tropical forest. Their surface tension was measured and found to be below 30 mN/m, the lowest reported for aerosols, to our knowledge. This very low surface tension was attributed to the presence of biosurfactants, the only natural substances able to reach to such low values. The presence of strong microbial surfactants in aerosols would be consistent with the organic fractions of exceptional cloud-nucleating efficiency recently found in aerosols, and with the correlations between algae bloom and cloud cover reported in the Southern Ocean. The results of this work also suggest that biosurfactants might be common in aerosols and thus of global relevance. If this is confirmed, a new role for microorganisms on the atmosphere and climate could be identified.

Cloud shading and fog drip influence the metabolism of a coastal pine ecosystem.

Science.gov (United States)

Carbone, Mariah S; Park Williams, A; Ambrose, Anthony R; Boot, Claudia M; Bradley, Eliza S; Dawson, Todd E; Schaeffer, Sean M; Schimel, Joshua P; Still, Christopher J

2013-02-01

Assessing the ecological importance of clouds has substantial implications for our basic understanding of ecosystems and for predicting how they will respond to a changing climate. This study was conducted in a coastal Bishop pine forest ecosystem that experiences regular cycles of stratus cloud cover and inundation in summer. Our objective was to understand how these clouds impact ecosystem metabolism by contrasting two sites along a gradient of summer stratus cover. The site that was under cloud cover ~15% more of the summer daytime hours had lower air temperatures and evaporation rates, higher soil moisture content, and received more frequent fog drip inputs than the site with less cloud cover. These cloud-driven differences in environmental conditions translated into large differences in plant and microbial activity. Pine trees at the site with greater cloud cover exhibited less water stress in summer, larger basal area growth, and greater rates of sap velocity. The difference in basal area growth between the two sites was largely due to summer growth. Microbial metabolism was highly responsive to fog drip, illustrated by an observed ~3-fold increase in microbial biomass C with increasing summer fog drip. In addition, the site with more cloud cover had greater total soil respiration and a larger fractional contribution from heterotrophic sources. We conclude that clouds are important to the ecological functioning of these coastal forests, providing summer shading and cooling that relieve pine and microbial drought stress as well as regular moisture inputs that elevate plant and microbial metabolism. These findings are important for understanding how these and other seasonally dry coastal ecosystems will respond to predicted changes in stratus cover, rainfall, and temperature. © 2012 Blackwell Publishing Ltd.

Rodent Models for Metabolic Syndrome Research

Directory of Open Access Journals (Sweden)

Sunil K. Panchal

2011-01-01

Full Text Available Rodents are widely used to mimic human diseases to improve understanding of the causes and progression of disease symptoms and to test potential therapeutic interventions. Chronic diseases such as obesity, diabetes and hypertension, together known as the metabolic syndrome, are causing increasing morbidity and mortality. To control these diseases, research in rodent models that closely mimic the changes in humans is essential. This review will examine the adequacy of the many rodent models of metabolic syndrome to mimic the causes and progression of the disease in humans. The primary criterion will be whether a rodent model initiates all of the signs, especially obesity, diabetes, hypertension and dysfunction of the heart, blood vessels, liver and kidney, primarily by diet since these are the diet-induced signs in humans with metabolic syndrome. We conclude that the model that comes closest to fulfilling this criterion is the high carbohydrate, high fat-fed male rodent.

The rodent ultrasound production mechanism.

Science.gov (United States)

Roberts, L H

1975-03-01

Rodents produce two types of sounds, audible and ultrasonic, that differ markedly in physical structure. Studies of sound production in light gases show that whereas the audible cries appear to be produced, as in the case of most other mammals, by vibrating structures in the larynx, the ultrasonic cries are produced by a different mechanism, probably a whistle. 'Bird-call' whistles are shown to have all the properties of rodent ultrasonic cries and to mimic them in almost every detail. Thus it is concluded that rodents have two distinct sound production mechanisms, one for audible cries and one for ultrasonic cries.

Contribution of land use to rodent flea load distribution in the plague endemic area of Lushoto District, Tanzania.

Science.gov (United States)

Hieronimo, Proches; Kihupi, Nganga I; Kimaro, Didas N; Gulinck, Hubert; Mulungu, Loth S; Msanya, Balthazar M; Leirs, Herwig; Deckers, Jozef A

2014-07-01

Fleas associated with different rodent species are considered as the major vectors of bubonic plague, which is still rampant in different parts of the world. The objective of this study was to investigate the contribution of land use to rodent flea load distribution at fine scale in the plague endemic area of north-eastern Tanzania. Data was collected in three case areas namely, Shume, Lukozi and Mwangoi, differing in plague incidence levels. Data collection was carried out during both wet and dry seasons of 2012. Analysis of Variance and Boosted Regression Tree (BRT) statistical methods were used to clarify the relationships between fleas and specific land use characteristics. There was a significant variation (P ≤ 0.05) of flea indices in different land use types. Fallow and natural forest had higher flea indices whereas plantation forest mono-crop and mixed annual crops had the lowest flea indices among the aggregated land use types. The influence of individual land use types on flea indices was variable with fallow having a positive effect and land tillage showing a negative effect. The results also demonstrated a seasonal effect, part of which can be attributed to different land use practices such as application of pesticides, or the presence of grass strips around fields. These findings suggest that land use factors have a major influence on rodent flea abundance which can be taken as a proxy for plague infection risk. The results further point to the need for a comprehensive package that includes land tillage and crop type considerations on one hand and the associated human activities on the other, in planning and implementation of plague control interventions.

Energy balance of a sparse coniferous high-latitude forest under winter conditions

DEFF Research Database (Denmark)

Gryning, Sven-Erik; Batchvarova, E.; Bruin, H.A.R. de

2001-01-01

was simulated for a three month period. For conditions with a cloud cover of less than 7 oktas good agreement between model predictions and measurements were found. For cloud cover 7 and 8 oktas a considerable spread can be observed. To apply the proposed energy balance model, the global radiation must......Measurements carried out in Northern Finland on radiation and turbulent fluxes over a sparse, sub-arctic boreal forest with snow covered ground were analysed. The measurements represent late winter conditions characterised by low solar elevation angles. During the experiment (12-24 March 1997) day...... and night were about equally long. At low solar elevation angles the forest shades most of the snow surface. Therefore an important part of the radiation never reaches the snow surface but is absorbed by the forest. The sensible heat flux above the forest was fairly large, reaching more than 100 W m(-2...

Il laser scanning e CloudCUBE per le grotte di Naica

Directory of Open Access Journals (Sweden)

Erminio Paolo Canevese

2008-03-01

Full Text Available Laser scanning and CloudCube for Naica caves On May 2007, Virtualgeo, a geomatic software development and communication company, took part in the first official expedition to Mexico. The Project, coined "Naica", involves researchers from ten universities, four companies and several laboratories. Virtualgeo carried out the survey by applying laser scanning technology to hypogeal caves covered with selenite crystals. The data was processed using CloudCUBE, a proprietary software designed to manage and model 3D point clouds. The first results of the laser scanning survey of a spectacular “forest of crystals” are presented here.

Il laser scanning e CloudCUBE per le grotte di Naica

Directory of Open Access Journals (Sweden)

Erminio Paolo Canevese

2008-03-01

Full Text Available Laser scanning and CloudCube for Naica cavesOn May 2007, Virtualgeo, a geomatic software development and communication company, took part in the first official expedition to Mexico. The Project, coined "Naica", involves researchers from ten universities, four companies and several laboratories. Virtualgeo carried out the survey by applying laser scanning technology to hypogeal caves covered with selenite crystals. The data was processed using CloudCUBE, a proprietary software designed to manage and model 3D point clouds. The first results of the laser scanning survey of a spectacular “forest of crystals” are presented here.

Tree seed rain and seed removal, but not the seed bank, impede forest recovery in bracken (Pteridium aquilinum (L.) Kuhn)-dominated clearings in the African highlands.

Science.gov (United States)

Ssali, Fredrick; Moe, Stein R; Sheil, Douglas

2018-04-01

Considerable areas dominated by bracken Pteridium aquilinum (L.) Kuhn occur worldwide and are associated with arrested forest recovery. How forest recovery is impeded in these areas remains poorly understood, especially in the African highlands. The component processes that can lead to recruitment limitation-including low seed arrival, availability and persistence-are important determinants of plant communities and offer a potential explanation for bracken persistence. We investigated key processes that can contribute to recruitment limitation in bracken-dominated clearings in the Bwindi Impenetrable National Park, Uganda. We examined if differences in seed rain (dispersal limitation), soil seed bank, or seed removal (seed viability and persistence) can, individually or in combination, explain the differences in tree regeneration found between bracken-dominated areas and the neighboring forest. These processes were assessed along ten 50-m transects crossing the forest-bracken boundary. When compared to the neighboring forest, bracken clearings had fewer seedlings (bracken 11,557 ± 5482 vs. forest 34,515 ± 6066 seedlings/ha), lower seed rain (949 ± 582 vs. 1605 ± 335 tree seeds m -2  year -1 ), comparable but sparse soil seed bank (304 ± 236 vs. 264 ± 99 viable tree seeds/m 2 ), higher seed removal (70.1% ± 2.4% vs. 40.6% ± 2.4% over a 3-day interval), and markedly higher rodent densities (25.7 ± 5.4 vs. 5.0 ± 1.6 rodents per 100 trapping sessions). Camera traps revealed that rodents were the dominant animals visiting the seeds in our seed removal study. Synthesis : Recruitment limitation contributes to both the slow recovery of forest in bracken-dominated areas, and to the composition of the tree species that occur. Low seed arrival and low persistence of unburied seeds can both explain the reduced density of seedlings found in bracken versus neighboring forest. Seed removal, likely due to rodents, in particular appears sufficient to

Estimates of forest canopy height and aboveground biomass using ICESat.

Science.gov (United States)

Michael A. Lefsky; David J. Harding; Michael Keller; Warren B. Cohen; Claudia C. Carabajal; Fernando Del Bom; Maria O. Hunter; Raimundo Jr. de Oliveira

2005-01-01

Exchange of carbon between forests and the atmosphere is a vital component of the global carbon cycle. Satellite laser altimetry has a unique capability for estimating forest canopy height, which has a direct and increasingly well understood relationship to aboveground carbon storage. While the Geoscience Laser Altimeter System (GLAS) onboard the Ice, Cloud and land...

Fog in a marginal agricultural area surrounded by montane Andean cloud forest during El Niño climate

Science.gov (United States)

García-Santos, G.

2010-07-01

The aim of the present study was to evaluate temporal variations of water inputs, rainfall and fog (cloud water), and its contribution to the water balance in a marginal agricultural area of potato surrounded by tropical montane cloud forest in Colombia. Fog in the air boundary layer was estimated using a cylindrical fog collector. Liquid water content of fog events were evaluated before and during natural climate event of El Niño. Our study shows the temporal variation of these two water inputs in both daily and monthly cycles on Boyacá at 2900 m a.s.l. Rainfall was the most frequently observed atmospheric phenomenon, being present on average 62% of the days per year, whereas fog was 45% of the time. Reflected on the lower frequency, annual amount of fog was 11% of precipitation. However during the anomalous dry climate of El Niño, total amount of rainfall was negligible and the few fog events were the only water source for plant growth. Estimated water crop requirements were higher than the water inputs. The survival of the crops was explained by meteorological conditions during dew and fog events. High relative humidity might have eased the plant’s water stress by decreasing transpiration and temperature in leaves and soil, affecting the water balance and the heat exchange between the atmosphere-land interfaces in the marginal agricultural areas during exceptional dry climate.

Mapping Forest Cover and Forest Cover Change with Airborne S-Band Radar

Directory of Open Access Journals (Sweden)

Ramesh K. Ningthoujam

2016-07-01

Full Text Available Assessments of forest cover, forest carbon stocks and carbon emissions from deforestation and degradation are increasingly important components of sustainable resource management, for combating biodiversity loss and in climate mitigation policies. Satellite remote sensing provides the only means for mapping global forest cover regularly. However, forest classification with optical data is limited by its insensitivity to three-dimensional canopy structure and cloud cover obscuring many forest regions. Synthetic Aperture Radar (SAR sensors are increasingly being used to mitigate these problems, mainly in the L-, C- and X-band domains of the electromagnetic spectrum. S-band has not been systematically studied for this purpose. In anticipation of the British built NovaSAR-S satellite mission, this study evaluates the benefits of polarimetric S-band SAR for forest characterisation. The Michigan Microwave Canopy Scattering (MIMICS-I radiative transfer model is utilised to understand the scattering mechanisms in forest canopies at S-band. The MIMICS-I model reveals strong S-band backscatter sensitivity to the forest canopy in comparison to soil characteristics across all polarisations and incidence angles. Airborne S-band SAR imagery over the temperate mixed forest of Savernake Forest in southern England is analysed for its information content. Based on the modelling results, S-band HH- and VV-polarisation radar backscatter and the Radar Forest Degradation Index (RFDI are used in a forest/non-forest Maximum Likelihood classification at a spatial resolution of 6 m (70% overall accuracy, κ = 0.41 and 20 m (63% overall accuracy, κ = 0.27. The conclusion is that S-band SAR such as from NovaSAR-S is likely to be suitable for monitoring forest cover and its changes.

Impact of a drier Early-Mid-Holocene climate upon Amazonian forests.

Science.gov (United States)

Mayle, Francis E; Power, Mitchell J

2008-05-27

This paper uses a palaeoecological approach to examine the impact of drier climatic conditions of the Early-Mid-Holocene (ca 8000-4000 years ago) upon Amazonia's forests and their fire regimes. Palaeovegetation (pollen data) and palaeofire (charcoal) records are synthesized from 20 sites within the present tropical forest biome, and the underlying causes of any emergent patterns or changes are explored by reference to independent palaeoclimate data and present-day patterns of precipitation, forest cover and fire activity across Amazonia. During the Early-Mid-Holocene, Andean cloud forest taxa were replaced by lowland tree taxa as the cloud base rose while lowland ecotonal areas, which are presently covered by evergreen rainforest, were instead dominated by savannahs and/or semi-deciduous dry forests. Elsewhere in the Amazon Basin there is considerable spatial and temporal variation in patterns of vegetation disturbance and fire, which probably reflects the complex heterogeneous patterns in precipitation and seasonality across the basin, and the interactions between climate change, drought- and fire susceptibility of the forests, and Palaeo-Indian land use. Our analysis shows that the forest biome in most parts of Amazonia appears to have been remarkably resilient to climatic conditions significantly drier than those of today, despite widespread evidence of forest burning. Only in ecotonal areas is there evidence of biome replacement in the Holocene. From this palaeoecological perspective, we argue against the Amazon forest 'dieback' scenario simulated for the future.

Morphological diagnosis and geographic distribution of Atlantic Forest red-rumped mice of the genus Juliomys (Rodentia: Sigmodontinae)

OpenAIRE

Pavan,Silvia E; Leite,Yuri L. R

2011-01-01

Recognition and identification of red-rumped mice of the genus Juliomys González, 2000 has been a problem among many mammalogists, and specimens of this genus are commonly confused with other Atlantic Forest sigmodontine rodents. Herein we provide an expanded diagnosis for the genus based on the analyses of the three living species of Juliomys, and provide morphological comparisons to the small bodied and bright colored rodents Rhagomys rufescens (Thomas, 1886) and Oligoryzomys flavescens (Wa...

How might Australian rainforest cloud interception respond to climate change?

Science.gov (United States)

Wallace, Jim; McJannet, Dave

2013-02-01

SummaryThe lower and upper montane rainforests in northern Queensland receive significant amounts of cloud interception that affect both in situ canopy wetness and downstream runoff. Cloud interception contributes 5-30% of the annual water input to the canopy and this increases to 40-70% of the monthly water input during the dry season. This occult water is therefore an important input to the canopy, sustaining the epiphytes, mosses and other species that depend on wet canopy conditions. The potential effect of climate change on cloud interception was examined using the relationship between cloud interception and cloud frequency derived from measurements made at four different rainforest locations. Any given change in cloud frequency produces a greater change in cloud interception and this 'amplification' increases from 1.1 to 1.7 as cloud frequency increases from 5% to 70%. This means that any changes in cloud frequency will have the greatest relative effects at the higher altitude sites where cloud interception is greatest. As cloud frequency is also a major factor affecting canopy wetness, any given change in cloud frequency will therefore have a greater impact on canopy wetness at the higher altitude sites. These changes in wetness duration will augment those due to changes in rainfall and may have important implications for the fauna and flora that depend on wet canopy conditions. We also found that the Australian rainforests may be more efficient (by ˜50% on average) in intercepting cloud water than American coniferous forests, which may be due to differences in canopy structure and exposure at the different sites.

UAV-BASED PHOTOGRAMMETRIC POINT CLOUDS – TREE STEM MAPPING IN OPEN STANDS IN COMPARISON TO TERRESTRIAL LASER SCANNER POINT CLOUDS

Directory of Open Access Journals (Sweden)

A. Fritz

2013-08-01

Full Text Available In both ecology and forestry, there is a high demand for structural information of forest stands. Forest structures, due to their heterogeneity and density, are often difficult to assess. Hence, a variety of technologies are being applied to account for this "difficult to come by" information. Common techniques are aerial images or ground- and airborne-Lidar. In the present study we evaluate the potential use of unmanned aerial vehicles (UAVs as a platform for tree stem detection in open stands. A flight campaign over a test site near Freiburg, Germany covering a target area of 120 × 75 [m2] was conducted. The dominant tree species of the site is oak (quercus robur with almost no understory growth. Over 1000 images with a tilt angle of 45° were shot. The flight pattern applied consisted of two antipodal staggered flight routes at a height of 55 [m] above the ground. We used a Panasonic G3 consumer camera equipped with a 14–42 [mm] standard lens and a 16.6 megapixel sensor. The data collection took place in leaf-off state in April 2013. The area was prepared with artificial ground control points for transformation of the structure-from-motion (SFM point cloud into real world coordinates. After processing, the results were compared with a terrestrial laser scanner (TLS point cloud of the same area. In the 0.9 [ha] test area, 102 individual trees above 7 [cm] diameter at breast height were located on in the TLS-cloud. We chose the software CMVS/PMVS-2 since its algorithms are developed with focus on dense reconstruction. The processing chain for the UAV-acquired images consists of six steps: a. cleaning the data: removing of blurry, under- or over exposed and off-site images; b. applying the SIFT operator [Lowe, 2004]; c. image matching; d. bundle adjustment; e. clustering; and f. dense reconstruction. In total, 73 stems were considered as reconstructed and located within one meter of the reference trees. In general stems were far less accurate

Wild Rodent Ectoparasites Collected from Northwestern Iran

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Zabihollah Zarei

2017-04-01

Full Text Available Background: Rodents play an important role as reservoir of some pathogens, and the host of some ectoparasites as well. These ectoparasites can transmit rodents’ pathogens to human or animals. The aim of this study was to assess the distribution and infestation load of ectoparasites on rodents in Meshkin-Shahr District, northwestern Iran.Method: Rodents were captured using baited live traps in spring 2014 from Meshkin-Shahr District and were trans­ferred to the laboratory for identification to the species level. Their ectoparasites were collected, mounted and identi­fied.Results: Three rodent species including Meriones persicus (74%, Mus musculus (16.9% and Cricetulus migrato­rius (9% were identified. Among all rodents, 185 specimens (90.69% were infested with a total of 521 ectopara­sites. Overall, 10 arthropods species were collected, including fleas (97.6%, one mite (1.6% and one louse species (0.6% as follows: Xenopsylla nubica, X. astia, X. buxtoni, X. cheopis, Nosopsyllus fasciatus, N. iranus, Cten­ocephalides felis, Ctenophthalmus rettigismiti, Ornithonyssus sp and one species of genus Polyplax. The most prev­alent ectoparasites species was X. nubica (89%.Conclusion: Nearly all rodent species were infested with Xenopsylla species. Monitoring of ectoparasites on infested rodents is very important for awareness and early warning towards control of arthropod-borne diseases.

New occurrences and biological aspects to four species of rodents (Mammalia: Cricetidae from Brazil

Directory of Open Access Journals (Sweden)

Felipe Santana Machado

2015-07-01

Full Text Available The most representative group among mammals are rodents for presenting high ratio to the total of species. However, rodents are considered a "taxonomic chaos" and some species such as Blarinomys breviceps, Bibimys labiosus, Akodon lindberghi and Pseudoryzomys simplex are little known. That can be explained because of low occurrence of small terrestrial mammals in wildlife inventories and/or reduced abundance. The objective is to describe the occurrence of these species and analyze these locations presenting descriptive comments about their biological aspects. Therefore, in addition to specimens collected in the field, some scientific collections were visited and reviews in relevant literature were conducted in order to obtain information about the locations and biological aspects. Akodon lindberghi was found in five sites, Bibimys labiosus was found in 15, Blarinomys breviceps in 39 and Pseudoryzomys simplex  in 13. Each species has specific information and they are included in two threatened areas, Atlantic Forest and Cerrado. The occurrences are disconnected and related to taxonomic and methodological problems. Keywords: New records. Rodentia. Sigmodontinae. Occurence area.

A Survey of Zoonotic Pathogens Carried by Non-Indigenous Rodents at the Interface of the Wet Tropics of North Queensland, Australia.

Science.gov (United States)

Chakma, S; Picard, J; Duffy, R; Constantinoiu, C; Gummow, B

2017-02-01

In 1964, Brucella was isolated from rodents trapped in Wooroonooran National Park (WNP), in Northern Queensland, Australia. Genotyping of bacterial isolates in 2008 determined that they were a novel Brucella species. This study attempted to reisolate this species of Brucella from rodents living in the boundary area adjacent to WNP and to establish which endo- and ecto-parasites and bacterial agents were being carried by non-indigenous rodents at this interface. Seventy non-indigenous rodents were trapped [Mus musculus (52), Rattus rattus (17) and Rattus norvegicus (1)], euthanized and sampled on four properties adjacent to the WNP in July 2012. Organ pools were screened by culture for Salmonella, Leptospira and Brucella species, real-time PCR for Coxiella burnetii and conventional PCR for Leptospira. Collected ecto- and endo-parasites were identified using morphological criteria. The percentage of rodents carrying pathogens were Leptospira (40%), Salmonella choleraesuis ssp. arizonae (14.29%), ectoparasites (21.42%) and endoparasites (87%). Brucella and C. burnetii were not identified, and it was concluded that their prevalences were below 12%. Two rodent-specific helminthic species, namely Syphacia obvelata (2.86%) and Nippostrongylus brasiliensis (85.71%), were identified. The most prevalent ectoparasites belonged to Laelaps spp. (41.17%) followed by Polyplax spp. (23.53%), Hoplopleura spp. (17.65%), Ixodes holocyclus (17.64%) and Stephanocircus harrisoni (5.88%), respectively. These ectoparasites, except S. harrisoni, are known to transmit zoonotic pathogens such as Rickettsia spp. from rat to rat and could be transmitted to humans by other arthropods that bite humans. The high prevalence of pathogenic Leptospira species is of significant public health concern. This is the first known study of zoonotic agents carried by non-indigenous rodents living in the Australian wet-tropical forest interface. © 2015 Blackwell Verlag GmbH.

Mapping forest tree species over large areas with partially cloudy Landsat imagery

Science.gov (United States)

Turlej, K.; Radeloff, V.

2017-12-01

Forests provide numerous services to natural systems and humankind, but which services forest provide depends greatly on their tree species composition. That makes it important to track not only changes in forest extent, something that remote sensing excels in, but also to map tree species. The main goal of our work was to map tree species with Landsat imagery, and to identify how to maximize mapping accuracy by including partially cloudy imagery. Our study area covered one Landsat footprint (26/28) in Northern Wisconsin, USA, with temperate and boreal forests. We selected this area because it contains numerous tree species and variable forest composition providing an ideal study area to test the limits of Landsat data. We quantified how species-level classification accuracy was affected by a) the number of acquisitions, b) the seasonal distribution of observations, and c) the amount of cloud contamination. We classified a single year stack of Landsat-7, and -8 images data with a decision tree algorithm to generate a map of dominant tree species at the pixel- and stand-level. We obtained three important results. First, we achieved producer's accuracies in the range 70-80% and user's accuracies in range 80-90% for the most abundant tree species in our study area. Second, classification accuracy improved with more acquisitions, when observations were available from all seasons, and is the best when images with up to 40% cloud cover are included. Finally, classifications for pure stands were 10 to 30 percentage points better than those for mixed stands. We conclude that including partially cloudy Landsat imagery allows to map forest tree species with accuracies that were previously only possible for rare years with many cloud-free observations. Our approach thus provides important information for both forest management and science.

Environmental conditions regulate the impact of plants on cloud formation.

Science.gov (United States)

Zhao, D F; Buchholz, A; Tillmann, R; Kleist, E; Wu, C; Rubach, F; Kiendler-Scharr, A; Rudich, Y; Wildt, J; Mentel, Th F

2017-02-20

The terrestrial vegetation emits large amounts of volatile organic compounds (VOC) into the atmosphere, which on oxidation produce secondary organic aerosol (SOA). By acting as cloud condensation nuclei (CCN), SOA influences cloud formation and climate. In a warming climate, changes in environmental factors can cause stresses to plants, inducing changes of the emitted VOC. These can modify particle size and composition. Here we report how induced emissions eventually affect CCN activity of SOA, a key parameter in cloud formation. For boreal forest tree species, insect infestation by aphids causes additional VOC emissions which modifies SOA composition thus hygroscopicity and CCN activity. Moderate heat increases the total amount of constitutive VOC, which has a minor effect on hygroscopicity, but affects CCN activity by increasing the particles' size. The coupling of plant stresses, VOC composition and CCN activity points to an important impact of induced plant emissions on cloud formation and climate.

Quantifying Biomass from Point Clouds by Connecting Representations of Ecosystem Structure

Science.gov (United States)

Hendryx, S. M.; Barron-Gafford, G.

2017-12-01

Quantifying terrestrial ecosystem biomass is an essential part of monitoring carbon stocks and fluxes within the global carbon cycle and optimizing natural resource management. Point cloud data such as from lidar and structure from motion can be effective for quantifying biomass over large areas, but significant challenges remain in developing effective models that allow for such predictions. Inference models that estimate biomass from point clouds are established in many environments, yet, are often scale-dependent, needing to be fitted and applied at the same spatial scale and grid size at which they were developed. Furthermore, training such models typically requires large in situ datasets that are often prohibitively costly or time-consuming to obtain. We present here a scale- and sensor-invariant framework for efficiently estimating biomass from point clouds. Central to this framework, we present a new algorithm, assignPointsToExistingClusters, that has been developed for finding matches between in situ data and clusters in remotely-sensed point clouds. The algorithm can be used for assessing canopy segmentation accuracy and for training and validating machine learning models for predicting biophysical variables. We demonstrate the algorithm's efficacy by using it to train a random forest model of above ground biomass in a shrubland environment in Southern Arizona. We show that by learning a nonlinear function to estimate biomass from segmented canopy features we can reduce error, especially in the presence of inaccurate clusterings, when compared to a traditional, deterministic technique to estimate biomass from remotely measured canopies. Our random forest on cluster features model extends established methods of training random forest regressions to predict biomass of subplots but requires significantly less training data and is scale invariant. The random forest on cluster features model reduced mean absolute error, when evaluated on all test data in leave

Using camera trap data to assess the impact of bushmeat hunting on forest mammals in Tanzania

DEFF Research Database (Denmark)

Hegerl, Carla; Burgess, Neil David; Nielsen, Martin Reinhardt

2017-01-01

significantly altered, with an increase in rodents, and loss of large carnivores and omnivores. Overall, our results show how ineffective reserve management, with almost absent law enforcement, leads to uncontrolled illegal hunting, which in turn has a significant impact on the mammal fauna of globally...... evaluated the impacts of illegal bushmeat hunting on the mammal community of two ecologically similar forests in the Udzungwa Mountains of Tanzania. The forests differ only in their protection status: one is a National Park and the other a Forest Reserve. We deployed systematic camera trap surveys...

Home range and diet of feral cats in Hawaii forests

Science.gov (United States)

Smucker, T.D.; Lindsey, G.D.; Mosher, S.M.

2000-01-01

Feral cat Felis catus home range in a Hawaiian montane wet forest and their diet in three habitats - montane wet forest, subalpine dry forest, and lowland dry forest - were determined to provide baseline ecological data and to assess potential impacts to native terrestrial fauna. Seven cats (three males and four females) were captured in 624 trap nights. Mean weight of adult cats was 2.85 ?? 0.27 (SE) Kg for males and 1.87 ?? 0.03 kg for females. Mean diumal home range using the adaptive kernel method was 5.74 ?? 2.73 km2 for three males and 2.23 ?? 0.44 km2 for two females. Daytime locations were always within the montane wet forest with the borders on one or more sides of the home ranges of all cats defined by open grassland pastures. Rodents comprised the majority of the cat diets in all three habitats, with the frequencies of occurence between 0.88 and 0.91. Bird remains were a regular component of the diet of cats, with montane wet forest having the highest frequency of occurence (0.68), followed by subalpine dry forest (0.53), and lowland dry forest (0.21).

Forest Management_MCD Issue2 2007

African Journals Online (AJOL)

for biodiversity on Earth, and this biodiversity is found mainly in Madagascar's .... Standardized models are appropriate .... this had little effect on its forest management policy until very recently. ... In the mid - 1980s, Madagascar's political climate began to change as ..... A selection correction for cloud cover in satellite images.

Mapping Clearances in Tropical Dry Forests Using Breakpoints, Trend, and Seasonal Components from MODIS Time Series: Does Forest Type Matter?

NARCIS (Netherlands)

Grogan, Kenneth; Pflugmacher, Dirk; Hostert, Patrick; Verbesselt, Jan; Fensholt, Rasmus

2016-01-01

Tropical environments present a unique challenge for optical time series analysis, primarily owing to fragmented data availability, persistent cloud cover and atmospheric aerosols. Additionally, little is known of whether the performance of time series change detection is affected by diverse forest

Guinea pig ID-like families of SINEs.

Science.gov (United States)

Kass, David H; Schaetz, Brian A; Beitler, Lindsey; Bonney, Kevin M; Jamison, Nicole; Wiesner, Cathy

2009-05-01

Previous studies have indicated a paucity of SINEs within the genomes of the guinea pig and nutria, representatives of the Hystricognathi suborder of rodents. More recent work has shown that the guinea pig genome contains a large number of B1 elements, expanding to various levels among different rodents. In this work we utilized A-B PCR and screened GenBank with sequences from isolated clones to identify potentially uncharacterized SINEs within the guinea pig genome, and identified numerous sequences with a high degree of similarity (>92%) specific to the guinea pig. The presence of A-tails and flanking direct repeats associated with these sequences supported the identification of a full-length SINE, with a consensus sequence notably distinct from other rodent SINEs. Although most similar to the ID SINE, it clearly was not derived from the known ID master gene (BC1), hence we refer to this element as guinea pig ID-like (GPIDL). Using the consensus to screen the guinea pig genomic database (Assembly CavPor2) with Ensembl BlastView, we estimated at least 100,000 copies, which contrasts markedly to just over 100 copies of ID elements. Additionally we provided evidence of recent integrations of GPIDL as two of seven analyzed conserved GPIDL-containing loci demonstrated presence/absence variants in Cavia porcellus and C. aperea. Using intra-IDL PCR and sequence analyses we also provide evidence that GPIDL is derived from a hystricognath-specific SINE family. These results demonstrate that this SINE family continues to contribute to the dynamics of genomes of hystricognath rodents.

Empty forests, empty stomachs? Bushmeat and livelihoods in the Congo and Amazon Basins

DEFF Research Database (Denmark)

Nasi, R.; Taber, A.; van Vliet, Nathalie

2011-01-01

Protein from forest wildlife is crucial to rural food security and livelihoods across the tropics. The harvest of animals such as tapir, duikers, deer, pigs, peccaries, primates and larger rodents, birds and reptiles provides benefits to local people worth millions of USS annually and represents...... around 6 million tonnes of animals extracted yearly. Vulnerability to hunting varies, with some species sustaining populations in heavily hunted secondary habitats, while others require intact forests with minimal harvesting to maintain healthy populations. Some species or groups have been characterized...

The role of clouds in the surface energy balance over the Amazon forest

International Nuclear Information System (INIS)

Eltahir, E.A.B.; Humphries, E.J. Jr.

1998-01-01

Deforestation in the Amazon region will initially impact the energy balance at the land surface through changes in land cover and surface hydrology. However, continuation of this human activity will eventually lead to atmospheric feedbacks, including changes in cloudiness which may play an important role in the final equilibrium of solar and terrestrial radiation at the surface. In this study, the different components of surface radiation over an undisturbed forest in the Amazon region are computed using data from the Amazon region micrometerological experiment (ARME). Several measures of cloudiness are defined: two estimated from the terrestrial radiation measurements, and one from the solar radiation measurements. The sensitivity of the surface fluxes of solar and terrestrial radiation to natural variability in cloudiness is investigated to infer the potential role of the cloudiness feedback in the surface energy balance. The results of this analysis indicate that a 1% decrease in cloudiness would increase net solar radiation by ca. 1.6 W/m 2 . However, the overall magnitude of this feedback, due to total deforestation of the Amazon forest, is likely to be of the same order as the magnitude of the decrease in net solar radiation due to the observed increase in surface albedo following deforestation. Hence, the total change in net solar radiation is likely to have a negligible magnitude. In contrast to this conclusion, we find that terrestrial radiation is likely to be more strongly affected; reduced cloudiness will decrease net terrestrial radiation; a 1% decrease in cloudiness induces a reduction in net terrestrial radiation of ca. 0.7 W/m 2 ; this process augments the similar effects of the predicted warming and drying in the boundary layer. Due to the cloudiness feedback, the most significant effect of large-scale deforestation on the surface energy balance is likely to be in the modification of the terrestrial radiation field rather than the classical albedo

Template based rodent brain extraction and atlas mapping.

Science.gov (United States)

Weimin Huang; Jiaqi Zhang; Zhiping Lin; Su Huang; Yuping Duan; Zhongkang Lu

2016-08-01

Accurate rodent brain extraction is the basic step for many translational studies using MR imaging. This paper presents a template based approach with multi-expert refinement to automatic rodent brain extraction. We first build the brain appearance model based on the learning exemplars. Together with the template matching, we encode the rodent brain position into the search space to reliably locate the rodent brain and estimate the rough segmentation. With the initial mask, a level-set segmentation and a mask-based template learning are implemented further to the brain region. The multi-expert fusion is used to generate a new mask. We finally combine the region growing based on the histogram distribution learning to delineate the final brain mask. A high-resolution rodent atlas is used to illustrate that the segmented low resolution anatomic image can be well mapped to the atlas. Tested on a public data set, all brains are located reliably and we achieve the mean Jaccard similarity score at 94.99% for brain segmentation, which is a statistically significant improvement compared to two other rodent brain extraction methods.

Drivers of methane uptake by montane forest soils in the Peruvian Andes

Science.gov (United States)

Jones, Sam; Diem, Torsten; Huaraca Quispe, Lidia; Cahuana, Adan; Meir, Patrick; Teh, Yit

2016-04-01

The exchange of methane between the soils of humid tropical forests and the atmosphere is relatively poorly documented. This is particularly true of montane settings where variations between uptake and emission of atmospheric methane have been observed. Whilst most of these ecosystems appear to function as net sinks for atmospheric methane, some act as considerable sources. In regions like the Andes, humid montane forests are extensive and a better understanding of the magnitude and controls on soil-atmosphere methane exchange is required. We report methane fluxes from upper montane cloud forest (2811 - 2962 m asl), lower montane cloud forest (1532 - 1786 m asl), and premontane forest (1070 - 1088 m asl) soils in south-eastern Peru. Between 1000 and 3000 m asl, mean annual air temperature and total annual precipitation decrease from 24 ° C and 5000 mm to 12 ° C and 1700 mm. The study region experiences a pronounced wet season between October and April. Monthly measurements of soil-atmosphere gas exchange, soil moisture, soil temperature, soil oxygen concentration, available ammonium and available nitrate were made from February 2011 in the upper and lower montane cloud forests and July 2011 in the premontane forest to June 2013. These soils acted as sinks for atmospheric methane with mean net fluxes for wet and dry season, respectively, of -2.1 (0.2) and -1.5 (0.1) mg CH4 m-2 d-1 in the upper montane forest; -1.5 (0.2) and -1.4 (0.1) mg CH4 m-2 d-1in the lower montane forest; and -0.3 (0.2) and -0.2 (0.2) mg CH4 m-2 d-1 in the premontane forest. Spatial variations among forest types were related to available nitrate and water-filled pore space suggesting that nitrate inhibition of oxidation or constraints on the diffusional supply of methane to methanotrophic communities may be important controls on methane cycling in these soils. Seasonality in methane exchange, with weaker uptake related to increased water-filled pore space and soil temperature during the wet

Cloud Infrastructure & Applications - CloudIA

Science.gov (United States)

Sulistio, Anthony; Reich, Christoph; Doelitzscher, Frank

The idea behind Cloud Computing is to deliver Infrastructure-as-a-Services and Software-as-a-Service over the Internet on an easy pay-per-use business model. To harness the potentials of Cloud Computing for e-Learning and research purposes, and to small- and medium-sized enterprises, the Hochschule Furtwangen University establishes a new project, called Cloud Infrastructure & Applications (CloudIA). The CloudIA project is a market-oriented cloud infrastructure that leverages different virtualization technologies, by supporting Service-Level Agreements for various service offerings. This paper describes the CloudIA project in details and mentions our early experiences in building a private cloud using an existing infrastructure.

Tactile learning in rodents: Neurobiology and neuropharmacology.

Science.gov (United States)

Roohbakhsh, Ali; Shamsizadeh, Ali; Arababadi, Mohammad Kazemi; Ayoobi, Fateme; Fatemi, Iman; Allahtavakoli, Mohammad; Mohammad-Zadeh, Mohammad

2016-02-15

Animal models of learning and memory have been the subject of considerable research. Rodents such as mice and rats are nocturnal animals with poor vision, and their survival depends on their sense of touch. Recent reports have shown that whisker somatosensation is the main channel through which rodents collect and process environmental information. This review describes tactile learning in rodents from a neurobiological and neuropharmacological perspective, and how this is involved in memory-related processes. Copyright © 2016 Elsevier Inc. All rights reserved.

The influence of clouds and diffuse radiation on ecosystem-atmosphere CO2 and CO18O exhanges

Energy Technology Data Exchange (ETDEWEB)

Still, C.J.; Riley, W.J.; Biraud, S.C.; Noone, D.C.; Buenning, N.H.; Randerson, J.T.; Torn, M.S.; Welker, J.; White, J.W.C.; Vachon, R.; Farquhar, G.D.; Berry, J.A.

2009-05-01

This study evaluates the potential impact of clouds on ecosystem CO{sub 2} and CO{sub 2} isotope fluxes ('isofluxes') in two contrasting ecosystems (a broadleaf deciduous forest and a C{sub 4} grassland), in a region for which cloud cover, meteorological, and isotope data are available for driving the isotope-enabled land surface model, ISOLSM. Our model results indicate a large impact of clouds on ecosystem CO{sub 2} fluxes and isofluxes. Despite lower irradiance on partly cloudy and cloudy days, predicted forest canopy photosynthesis was substantially higher than on clear, sunny days, and the highest carbon uptake was achieved on the cloudiest day. This effect was driven by a large increase in light-limited shade leaf photosynthesis following an increase in the diffuse fraction of irradiance. Photosynthetic isofluxes, by contrast, were largest on partly cloudy days, as leaf water isotopic composition was only slightly depleted and photosynthesis was enhanced, as compared to adjacent clear sky days. On the cloudiest day, the forest exhibited intermediate isofluxes: although photosynthesis was highest on this day, leaf-to-atmosphere isofluxes were reduced from a feedback of transpiration on canopy relative humidity and leaf water. Photosynthesis and isofluxes were both reduced in the C{sub 4} grass canopy with increasing cloud cover and diffuse fraction as a result of near-constant light limitation of photosynthesis. These results suggest that some of the unexplained variation in global mean {delta}{sup 18}O of CO{sub 2} may be driven by large-scale changes in clouds and aerosols and their impacts on diffuse radiation, photosynthesis, and relative humidity.

How many food additives are rodent carcinogens?

Science.gov (United States)

Johnson, F M

2002-01-01

One generally assumes that chemical agents added to foods are reasonably free of risks to human health, and practically everyone consumes some additives in his or her food daily throughout life. In the United States, the 1958 Food Additives Amendment to the Federal Food, Drug and Cosmetic Act of 1938 requires food manufacturers to demonstrate the safety of food additives to the Food and Drug Administration (FDA). The Amendment contains a provision that prohibits approval of an additive if it is found to cause cancer in humans or animals. In the present study, data from the National Toxicology Program rodent bioassay (NTPRB) were used to identify a sample of approximately 50 rodent-tested additives and other chemicals added to food that had been evaluated independently of the FDA/food industry. Surprisingly, the sample shows more than 40% of these food chemicals to be carcinogenic in one or more rodent groups. If this percentage is extrapolated to all substances added to food in the United States, it would imply that more than 1000 of such substances are potential rodent carcinogens. The NTP and FDA test guidelines use similar, though not necessarily identical, rodent test procedures, including near lifetime exposures to the maximum tolerated dose. The FDA specifies that test chemicals should be administered by the oral route. However, the oral route includes three methods of delivering chemicals, that is, mixed in the food or water or delivered by stomach tube (gavage). The NTP data show only 1 of 18 food chemicals mixed in the food are rodent carcinogens, but 16 of 23 gavage-administered food chemicals are carcinogenic to rodents. The distribution suggests that among orally delivered chemicals, those administered in the feed will more likely prove to be noncarcinogens than chemicals given by gavage. The rodent data also reveal that effects may vary according to dose and genotype, as well as by route of administration, to further complicate extrapolation to humans

Exploratory Water Budget Analysis of A Transitional Premontane Cloud Forest in Costa Rica Through Undergraduate Research

Science.gov (United States)

Washington-Allen, R. A.; Buckwalter, E. H.; Moore, G. W.; Burns, J. N.; Dennis, A. R.; Dodge, O.; Guffin, E. C.; Morris, E. R.; Oien, R. P.; Orozco, G.; Peterson, A.; Teale, N. G.; Shibley, N. C.; Tourtellotte, N.; Houser, C.; Brooks, S. D.; Brumbelow, J. K.; Cahill, A. T.; Frauenfeld, O. W.; Gonzalez, E.; Hallmark, C. T.; McInnes, K. J.; Miller, G. R.; Morgan, C.; Quiring, S. M.; Rapp, A. D.; Roark, E.; Delgado, A.; Ackerson, J. P.; Arnott, R.

2012-12-01

The ecohydrology of transitional premontane cloud forests is not well understood. This problem is being addressed by a NSF Research Experience for Undergraduates (REU) study at the Texas A&M University Soltis Center for Research & Education in Costa Rica. Exploratory analysis of the water budget within a 20-ha watershed was used to connect three faculty-mentored research areas in ecohydrology, climate, and soil sciences and highlight the roles of 12 undergraduate researchers from 12 different universities. The water budget model is Q = Pn - E - T + ΔG + ΔS where Q = runoff, Pn = net precipitation, E = evaporation, T = transpiration, and ΔG and ΔS are change in groundwater soil water storage, respectively. Additionally, Pn = Pg - I = Tf + Sf + D, where Pg = gross precipitation, I/ΔI = canopy interception or storage, Tf = throughfall, Sf = stemflow, and D = canopy drip. The following terms were well understood Pg (satellite = 34-mm and tower = 38.1-mm) and Q from a recently constructed v-notch weir. We moderately understand Tf + D (30.9-mm from an array of forest rain gages), ΔI (7.2-mm) related to Sf, and T (10.4-mm measured with sapflow sensors). We found that soils were clay loam to silty loam textured Andisols on saprolitic tuft with a mean potential ΔS of 398 mm H2O under laboratory conditions, but in the field the following terms are almost completely unknown and require further field studies including E, ΔG, and ΔS. Recent installation of piezometers will address ΔG. Temporal scaling of measurements to a 1-week period was a challenge as well as the construction, deployment and calibration of instruments. However, this exploration allowed us to determine measurement uncertainties in the water budget, e.g., E, and to set future areas of research to address these uncertainties.

Effect of Removal of Woody Biomass after Clearcutting and Intercropping Switchgrass (Panicum virgatum with Loblolly Pine (Pinus taeda on Rodent Diversity and Populations

Directory of Open Access Journals (Sweden)

Matthew M. Marshall

2012-01-01

Full Text Available Plant-based feedstocks have long been considered viable, potential sources for biofuels. However, concerns regarding production effects may outweigh gains like carbon savings. Additional information is needed to understand environmental effects of growing feedstocks, including effects on wildlife communities and populations. We used a randomized and replicated experimental design to examine initial effects of biofuel feedstock treatment options, including removal of woody biomass after clearcutting and intercropping switchgrass (Panicum virgatum, on rodents to 2 years post-treatment in regenerating pine plantations in North Carolina, USA. Rodent community composition did not change with switchgrass production or residual biomass removal treatments. Further, residual biomass removal had no influence on rodent population abundances. However, Peromyscus leucopus was found in the greatest abundance and had the greatest survival in treatments without switchgrass. In contrast, abundance of invasive Mus musculus was greatest in switchgrass treatments. Other native species, such as Sigmodon hispidus, were not influenced by the presence of switchgrass. Our results suggest that planting of switchgrass, but not biomass removal, had species-specific effects on rodents at least 2 years post-planting in an intensively managed southern pine system. Determining ecological mechanisms underlying our observed species associations with switchgrass will be integral for understanding long-term sustainability of biofuels production in southern pine forest.

Convergent and Divergent Adaptations of Subterranean Rodents

DEFF Research Database (Denmark)

Fang, Xiaodong

Subterranean rodents comprise approximately 250 species that spend their entire lives in underground, unventilated tunnels, distributed along all continents except Australia and Antarctica. Subterranean rodents escape from predators and extreme climatic fluctuations in their underground habitats,...

Native rodent species are unlikely sources of infection for Leishmania (Viannia braziliensis along the Transoceanic Highway in Madre de Dios, Peru.

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Lisa A Shender

Full Text Available An estimated 2.3 million disability-adjusted life years are lost globally from leishmaniasis. In Peru's Amazon region, the department of Madre de Dios (MDD rises above the rest of the country in terms of the annual incidence rates of human leishmaniasis. Leishmania (Viannia braziliensis is the species most frequently responsible for the form of disease that results in tissue destruction of the nose and mouth. However, essentially nothing is known regarding the reservoirs of this vector-borne, zoonotic parasite in MDD. Wild rodents have been suspected, or proven, to be reservoirs of several Leishmania spp. in various ecosystems and countries. Additionally, people who live or work in forested terrain, especially those who are not regionally local and whose immune systems are thus naïve to the parasite, are at most risk for contracting L. (V. braziliensis. Hence, the objective of this study was to collect tissues from wild rodents captured at several study sites along the Amazonian segment of the newly constructed Transoceanic Highway and to use molecular laboratory techniques to analyze samples for the presence of Leishmania parasites. Liver tissues were tested via polymerase chain reaction from a total of 217 rodents; bone marrow and skin biopsies (ear and tail were also tested from a subset of these same animals. The most numerous rodent species captured and tested were Oligoryzomys microtis (40.7%, Hylaeamys perenensis (15.7%, and Proechimys spp. (12%. All samples were negative for Leishmania, implying that although incidental infections may occur, these abundant rodent species are unlikely to serve as primary reservoirs of L. (V. braziliensis along the Transoceanic Highway in MDD. Therefore, although these rodent species may persist and even thrive in moderately altered landscapes, we did not find any evidence to suggest they pose a risk for L. (V. braziliensis transmission to human inhabitants in this highly prevalent region.

Native rodent species are unlikely sources of infection for Leishmania (Viannia) braziliensis along the Transoceanic Highway in Madre de Dios, Peru.

Science.gov (United States)

Shender, Lisa A; De Los Santos, Maxy; Montgomery, Joel M; Conrad, Patricia A; Ghersi, Bruno M; Razuri, Hugo; Lescano, Andres G; Mazet, Jonna A K

2014-01-01

An estimated 2.3 million disability-adjusted life years are lost globally from leishmaniasis. In Peru's Amazon region, the department of Madre de Dios (MDD) rises above the rest of the country in terms of the annual incidence rates of human leishmaniasis. Leishmania (Viannia) braziliensis is the species most frequently responsible for the form of disease that results in tissue destruction of the nose and mouth. However, essentially nothing is known regarding the reservoirs of this vector-borne, zoonotic parasite in MDD. Wild rodents have been suspected, or proven, to be reservoirs of several Leishmania spp. in various ecosystems and countries. Additionally, people who live or work in forested terrain, especially those who are not regionally local and whose immune systems are thus naïve to the parasite, are at most risk for contracting L. (V.) braziliensis. Hence, the objective of this study was to collect tissues from wild rodents captured at several study sites along the Amazonian segment of the newly constructed Transoceanic Highway and to use molecular laboratory techniques to analyze samples for the presence of Leishmania parasites. Liver tissues were tested via polymerase chain reaction from a total of 217 rodents; bone marrow and skin biopsies (ear and tail) were also tested from a subset of these same animals. The most numerous rodent species captured and tested were Oligoryzomys microtis (40.7%), Hylaeamys perenensis (15.7%), and Proechimys spp. (12%). All samples were negative for Leishmania, implying that although incidental infections may occur, these abundant rodent species are unlikely to serve as primary reservoirs of L. (V.) braziliensis along the Transoceanic Highway in MDD. Therefore, although these rodent species may persist and even thrive in moderately altered landscapes, we did not find any evidence to suggest they pose a risk for L. (V.) braziliensis transmission to human inhabitants in this highly prevalent region.

Rodent-borne diseases and their public health importance in Iran.

Directory of Open Access Journals (Sweden)

Mohammad Hasan Rabiee

2018-04-01

Full Text Available Rodents are reservoirs and hosts for several zoonotic diseases such as plague, leptospirosis, and leishmaniasis. Rapid development of industry and agriculture, as well as climate change throughout the globe, has led to change or increase in occurrence of rodent-borne diseases. Considering the distribution of rodents throughout Iran, the aim of this review is to assess the risk of rodent-borne diseases in Iran.We searched Google Scholar, PubMed, Science Direct, Scientific Information Database (SID, and Magiran databases up to September 2016 to obtain articles reporting occurrence of rodent-borne diseases in Iran and extract information from them. Out of 70 known rodent-borne diseases, 34 were reported in Iran: 17 (50% parasitic diseases, 13 (38% bacterial diseases, and 4 (12% viral diseases. Twenty-one out of 34 diseases were reported from both humans and rodents. Among the diseases reported in the rodents of Iran, plague, leishmaniasis, and hymenolepiasis were the most frequent. The most infected rodents were Rattus norvegicus (16 diseases, Mus musculus (14 diseases, Rattus rattus (13 diseases, Meriones persicus (7 diseases, Apodemus spp. (5 diseases, Tatera indica (4 diseases, Meriones libycus (3 diseases, Rhombomys opimus (3 diseases, Cricetulus migratorius (3 diseases, and Nesokia indica (2 diseases.The results of this review indicate the importance of rodent-borne diseases in Iran. Considering notable diversity of rodents and their extensive distribution throughout the country, it is crucial to pay more attention to their role in spreading infectious diseases for better control of the diseases.

Rodent-borne diseases and their public health importance in Iran

Science.gov (United States)

Mahmoudi, Ahmad; Siahsarvie, Roohollah; Kryštufek, Boris; Mostafavi, Ehsan

2018-01-01

Background Rodents are reservoirs and hosts for several zoonotic diseases such as plague, leptospirosis, and leishmaniasis. Rapid development of industry and agriculture, as well as climate change throughout the globe, has led to change or increase in occurrence of rodent-borne diseases. Considering the distribution of rodents throughout Iran, the aim of this review is to assess the risk of rodent-borne diseases in Iran. Methodology/Principal finding We searched Google Scholar, PubMed, Science Direct, Scientific Information Database (SID), and Magiran databases up to September 2016 to obtain articles reporting occurrence of rodent-borne diseases in Iran and extract information from them. Out of 70 known rodent-borne diseases, 34 were reported in Iran: 17 (50%) parasitic diseases, 13 (38%) bacterial diseases, and 4 (12%) viral diseases. Twenty-one out of 34 diseases were reported from both humans and rodents. Among the diseases reported in the rodents of Iran, plague, leishmaniasis, and hymenolepiasis were the most frequent. The most infected rodents were Rattus norvegicus (16 diseases), Mus musculus (14 diseases), Rattus rattus (13 diseases), Meriones persicus (7 diseases), Apodemus spp. (5 diseases), Tatera indica (4 diseases), Meriones libycus (3 diseases), Rhombomys opimus (3 diseases), Cricetulus migratorius (3 diseases), and Nesokia indica (2 diseases). Conclusions/Significance The results of this review indicate the importance of rodent-borne diseases in Iran. Considering notable diversity of rodents and their extensive distribution throughout the country, it is crucial to pay more attention to their role in spreading infectious diseases for better control of the diseases. PMID:29672510

Ectoparasites of Rodents Captured in Hamedan, Western Iran

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Hamid Zendehfili

2015-10-01

Full Text Available Background: Rodents with a population greater than the entire population of other mammals on earth are the source of economic losses and health conflicts. One of the major health problems with the rodents is their role as reservoir hosts of zoonotic diseases. The aim of this study was to assess the infestation of commensal rodents with ectoparasites in Hamedan City, Western Iran.Methods: The samples were collected by live traps during years 2012–2013. After transferring the samples to the Entomological Laboratory of Hamedan University of Medical Sciences, their ectoparasites were collected andidentified.Results: A total of 171 slides were prepared from 105 captured commensal rodents: Mus musculus, Rattus rattus and R. norvegicus comprising three orders namely Mesostigmata: Hypoaspis (Laelaspis astronomica, Dermanyssius sp, Pachylaelapidae (male. Metastigmata: Rhipicephalus sp and Anoplura: Polyplax spinulosa were recovered in Hamedan City. Seventy (66.6% rodents were found infested with at least one species of ectoparasites.Conclusion: The results of our study indicate that ectoparasites infestation in commensal rodents of Hamedan city is high and more attention by local health authorities is needed to prevent zoonotic diseases.

Formation of Massive Molecular Cloud Cores by Cloud-cloud Collision

OpenAIRE

Inoue, Tsuyoshi; Fukui, Yasuo

2013-01-01

Recent observations of molecular clouds around rich massive star clusters including NGC3603, Westerlund 2, and M20 revealed that the formation of massive stars could be triggered by a cloud-cloud collision. By using three-dimensional, isothermal, magnetohydrodynamics simulations with the effect of self-gravity, we demonstrate that massive, gravitationally unstable, molecular cloud cores are formed behind the strong shock waves induced by the cloud-cloud collision. We find that the massive mol...

Seedling establishment in a masting desert shrub parallels the pattern for forest trees

Science.gov (United States)

Meyer, Susan E.; Pendleton, Burton K.

2015-05-01

The masting phenomenon along with its accompanying suite of seedling adaptive traits has been well studied in forest trees but has rarely been examined in desert shrubs. Blackbrush (Coleogyne ramosissima) is a regionally dominant North American desert shrub whose seeds are produced in mast events and scatter-hoarded by rodents. We followed the fate of seedlings in intact stands vs. small-scale disturbances at four contrasting sites for nine growing seasons following emergence after a mast year. The primary cause of first-year mortality was post-emergence cache excavation and seedling predation, with contrasting impacts at sites with different heteromyid rodent seed predators. Long-term establishment patterns were strongly affected by rodent activity in the weeks following emergence. Survivorship curves generally showed decreased mortality risk with age but differed among sites even after the first year. There were no detectable effects of inter-annual precipitation variability or site climatic differences on survival. Intraspecific competition from conspecific adults had strong impacts on survival and growth, both of which were higher on small-scale disturbances, but similar in openings and under shrub crowns in intact stands. This suggests that adult plants preempted soil resources in the interspaces. Aside from effects on seedling predation, there was little evidence for facilitation or interference beneath adult plant crowns. Plants in intact stands were still small and clearly juvenile after nine years, showing that blackbrush forms cohorts of suppressed plants similar to the seedling banks of closed forests. Seedling banks function in the absence of a persistent seed bank in replacement after adult plant death (gap formation), which is temporally uncoupled from masting and associated recruitment events. This study demonstrates that the seedling establishment syndrome associated with masting has evolved in desert shrublands as well as in forests.

A Community-Based Surveillance on Determinants of Rodent Infestation

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Hsiu-Hua Pai

2003-01-01

Full Text Available Rodent infestation is an important factor in the transmission of infectious diseases of public health importance. From October to November 1998, surveillance stations were established in 110 boroughs of Kaohsiung City in southern Taiwan. Boroughs were chosen by random sampling 10 boroughs from each of 11 districts (464 boroughs in the city. The extent of rodent infestation was determined by cage trapping. The possibility of applying a community-based control program was evaluated by investigating associated demographic and environmental factors as well as related knowledge, attitudes, and behaviors. A total of 90 rodents were trapped in 41% of the 110 boroughs. Using univariate analyses, 17 factors were significantly associated with rodent infestation. A lack of knowledge that rodent control relies on community cooperation was the most important factor among the seven variables associated with the extent of rodent infestation (OR 3.1 by logistic multiple regression. This revealed the importance of community cooperation in controlling rodent infestation. Moreover, improvement of environmental hygiene associated with garbage problems, such as cleanliness of storage rooms and closets, and the hygiene of empty space and resource recycling stations should not be ignored.

In vitro foliage susceptibility of canary islands laurel forests: a model for better understanding the ecology of Phytophthora ramorum

Science.gov (United States)

Eduardo Moralejo; Enrique Descals

2008-01-01

The tree species that dominate the cloud-zone forests of Macaronesia, the coastal redwoods of California, the Valdivian forests of Chile, the Atlantic forests of Brazil and the podocarp forests of New Zealand are all examples of paleoendemic species that once had a much wider distribution. They appear to owe their survival to the particular environmental conditions...

Importance of rodents for hydrology: lessons learnt from various field experiments

Science.gov (United States)

van Schaik, Loes; Zangerlé, Anne; Schneider, Anne-Kathrin; Schröder, Boris; Eccard, Jana

2017-04-01

organisms are known to create soil macropores of different sizes and with varying extent and orientation: most commonly earthworms, rodents, moles and roots. Preferential flow through macropore networks is dynamic and typically occurs when short individual macropores become connected at the hillslope scale as the nodes between the macropores become wet. Large lateral macropores may contribute to rapid subsurface stormflow of water and solutes at hillslope scale and supply a significant part of the catchment scale discharge during high intensity rainfall events even under relatively dry catchment state. Outflow from soil pipes, especially in the valley bottom or along the banking near to streams, is frequently observed, however, it remains a challenge to measure the spatial distribution, extent and connectivity of macropores at hill slope scales. We hypothesize that local information on organism abundances may be used as an indicator for spatial variability in infiltration, water storage and fluxes at the small scale and that knowledge on the landscape scale spatial distribution of organisms can provide information on connectivity of macropores at hillslope scale. Here we summarize the lessons learnt during three years of measurements aimed at determining the influence of rodent burrows on soil hydrology in a meso-scale catchment. Within the Attert Catchment (297 km2) in Luxembourg we performed sprinkling experiments with a brilliant blue tracer on twelve plots, of which six directly above rodent burrow openings and six on a surface without a rodent burrow opening, in order to examine the influence of the burrow openings on the infiltration pattern. Then we tested the extent of flow through mice burrows in different forest types, with varying geology and slope, by supplying 5 Liters of water with brilliant blue tracer directly to 24 burrow openings at soil surface. We excavated the burrows to measure how far the water was transported laterally in the burrow. Though

Relationship between cloud radiative forcing, cloud fraction and cloud albedo, and new surface-based approach for determining cloud albedo

OpenAIRE

Y. Liu; W. Wu; M. P. Jensen; T. Toto

2011-01-01

This paper focuses on three interconnected topics: (1) quantitative relationship between surface shortwave cloud radiative forcing, cloud fraction, and cloud albedo; (2) surfaced-based approach for measuring cloud albedo; (3) multiscale (diurnal, annual and inter-annual) variations and covariations of surface shortwave cloud radiative forcing, cloud fraction, and cloud albedo. An analytical expression is first derived to quantify the relationship between cloud radiative forcing, cloud fractio...

A phylogeographic study of the endemic rodent Eliurus carletoni (Rodentia: Nesomyinae) in an ecological transition zone of Northern Madagascar.

Science.gov (United States)

Rakotoarisoa, Jean-Eric; Raheriarisena, Martin; Goodman, Steven M

2013-01-01

We conducted a mitochondrial phylogeographic study of the endemic dry forest rodent Eliurus carletoni (Rodentia: Nesomyinae) in an ecological transition zone of northern Madagascar (Loky-Manambato) and 2 surrounding regions (Ankarana and Analamerana). The main goal was to assess the evolutionary consequences on this taxon of the complex landscape features and Quaternary ecological vicissitudes. Three haplogroups were identified from the 215 specimens obtained from 15 populations. High levels of genetic diversity and significant genetic differentiation among populations were observed. The different geographical subdivisions of the study area by regions, by river catchment zones, and the physical distance between populations are not correlated with genetic patterns. In contrast, population structure is mostly explained by the geographic distribution of the samples among existing forest blocks. E. carletoni experienced a genetic bottleneck between 18 750 and 7500 years BP, which correlates with periods when moister climates existed on the island. Overall, our data suggest that the complex genetic patterns of E. carletoni can be explained by Quaternary climatic vicissitudes that resulted in habitat fluctuations between dry and humid forests, as well as subsequent human-induced fragmentation of forest habitat.

AUTOMATIC RECOGNITION OF INDOOR NAVIGATION ELEMENTS FROM KINECT POINT CLOUDS

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L. Zeng

2017-09-01

Full Text Available This paper realizes automatically the navigating elements defined by indoorGML data standard – door, stairway and wall. The data used is indoor 3D point cloud collected by Kinect v2 launched in 2011 through the means of ORB-SLAM. By contrast, it is cheaper and more convenient than lidar, but the point clouds also have the problem of noise, registration error and large data volume. Hence, we adopt a shape descriptor – histogram of distances between two randomly chosen points, proposed by Osada and merges with other descriptor – in conjunction with random forest classifier to recognize the navigation elements (door, stairway and wall from Kinect point clouds. This research acquires navigation elements and their 3-d location information from each single data frame through segmentation of point clouds, boundary extraction, feature calculation and classification. Finally, this paper utilizes the acquired navigation elements and their information to generate the state data of the indoor navigation module automatically. The experimental results demonstrate a high recognition accuracy of the proposed method.

Automatic Recognition of Indoor Navigation Elements from Kinect Point Clouds

Science.gov (United States)

Zeng, L.; Kang, Z.

2017-09-01

This paper realizes automatically the navigating elements defined by indoorGML data standard - door, stairway and wall. The data used is indoor 3D point cloud collected by Kinect v2 launched in 2011 through the means of ORB-SLAM. By contrast, it is cheaper and more convenient than lidar, but the point clouds also have the problem of noise, registration error and large data volume. Hence, we adopt a shape descriptor - histogram of distances between two randomly chosen points, proposed by Osada and merges with other descriptor - in conjunction with random forest classifier to recognize the navigation elements (door, stairway and wall) from Kinect point clouds. This research acquires navigation elements and their 3-d location information from each single data frame through segmentation of point clouds, boundary extraction, feature calculation and classification. Finally, this paper utilizes the acquired navigation elements and their information to generate the state data of the indoor navigation module automatically. The experimental results demonstrate a high recognition accuracy of the proposed method.

Dietary patterns of two herbivorous rodents: and Parotomys brantsii ...

African Journals Online (AJOL)

Frequency of occurrence of plant species in the diets were compared with availability of the plants in the rodents' habitats. Both rodents are generalist herbivores, eating plants species in proportion to the availability in their habitats. Dietary patterns, diversity of diet and degree of overlap between rodent's diets are a function ...

Thermoregulation of the subterranean rodent genus Bathyergus ...

African Journals Online (AJOL)

The thermoregulation of the largest subterranean rodent, genus Bathyergus, comprising two species, B. suillus and B. janetta,occurring in mesic and semiarid habitats respectively, was investigated and compared with that of other subterranean rodents. Both species display low resting metabolic rates and low body ...

A Field Study of Plague and Tularemia in Rodents, Western Iran.

Science.gov (United States)

Mostafavi, Ehsan; Shahraki, Abdolrazagh Hashemi; Japoni-Nejad, Alireza; Esmaeili, Saber; Darvish, Jamshid; Sedaghat, Mohammad Mehdi; Mohammadi, Ali; Mohammadi, Zeinolabedin; Mahmoudi, Ahmad; Pourhossein, Behzad; Ghasemi, Ahmad; Gyuranecz, Miklós; Carniel, Elisabeth

2017-04-01

Kurdistan Province in Iran is a historical focus for plague and tularemia. This study aimed at assessing the current status of these two foci by studying their rodent reservoirs. Rodents were trapped and their ectoparasites were collected. The genus and species of both rodents and ectoparasites were determined. Serological analyses of rodent blood samples were done by enzyme-linked immunosorbent assay for plague and by standard tube agglutination assay for tularemia. Rodent spleen samples were subjected to bacterial culture, microscopic examination, and real-time PCR to search for active plague or tularemia infection. During this study, 245 rodents were trapped, of which the most abundant genera were Apodemus (40%), Mus (24.49%), and Meriones (12.65%). One hundred fifty-three fleas, 37 mites, and 54 ticks were collected on these rodents. The results of all direct and indirect tests were negative for plague. Serological tests were positive for tularemia in 4.8% of trapped rodents. This study is the first report on the presence of tularemia infection in rodents in Western Iran. Since Meriones persicus is a known reservoir for plague and tularemia, and this rodent carried plague and tularemia vectors in Marivan and Sanandaj districts, there is a real potential for the occurrence of these two diseases in this region.

Uus Multiphonic Rodent

Index Scriptorium Estoniae

2009-01-01

Tartus tegutsenud eksperimentaal-rock-duo Opium Flirt Eestisse jäänud liige Erki Hõbe (paarimees Ervin Trofimov tegutseb Ungaris) annab välja oma teise sooloalbumi nime all Multiphonic Rodent, heliplaadi "Astral Dance" esitluskontsert toimub 5. veebruaril Tallinnas baaris Juuksur

Tree Species Classification in Temperate Forests Using Formosat-2 Satellite Image Time Series

Directory of Open Access Journals (Sweden)

David Sheeren

2016-09-01

Full Text Available Mapping forest composition is a major concern for forest management, biodiversity assessment and for understanding the potential impacts of climate change on tree species distribution. In this study, the suitability of a dense high spatial resolution multispectral Formosat-2 satellite image time-series (SITS to discriminate tree species in temperate forests is investigated. Based on a 17-date SITS acquired across one year, thirteen major tree species (8 broadleaves and 5 conifers are classified in a study area of southwest France. The performance of parametric (GMM and nonparametric (k-NN, RF, SVM methods are compared at three class hierarchy levels for different versions of the SITS: (i a smoothed noise-free version based on the Whittaker smoother; (ii a non-smoothed cloudy version including all the dates; (iii a non-smoothed noise-free version including only 14 dates. Noise refers to pixels contaminated by clouds and cloud shadows. The results of the 108 distinct classifications show a very high suitability of the SITS to identify the forest tree species based on phenological differences (average κ = 0 . 93 estimated by cross-validation based on 1235 field-collected plots. SVM is found to be the best classifier with very close results from the other classifiers. No clear benefit of removing noise by smoothing can be observed. Classification accuracy is even improved using the non-smoothed cloudy version of the SITS compared to the 14 cloud-free image time series. However conclusions of the results need to be considered with caution because of possible overfitting. Disagreements also appear between the maps produced by the classifiers for complex mixed forests, suggesting a higher classification uncertainty in these contexts. Our findings suggest that time-series data can be a good alternative to hyperspectral data for mapping forest types. It also demonstrates the potential contribution of the recently launched Sentinel-2 satellite for

Defaunation of large mammals leads to an increase in seed predation in the Atlantic forests

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Mauro Galetti

2015-01-01

Full Text Available Defaunation can trigger cascading events in natural communities and may have strong consequences for plant recruitment in tropical forests. Several species of large seed predators, such as deer and peccaries, are facing dramatic population collapse in tropical forests yet we do not have information about the consequences of these extinctions for seed predation. Using remote camera traps we tested if defaunated forests have a lower seed predation rate of a keystone palm (Euterpe edulis than pristine areas. Contrary to our expectation, we found that seed predation rates were 2.5 higher in defaunated forests and small rodents were responsible for most of the seeds eaten. Our results found that defaunation leads to changes in the seed predator communities with potential consequences for plant–animal interactions.

Rodent management: the man/environment interface

International Nuclear Information System (INIS)

Jackson, W.B.

1978-01-01

Rodents which interact with man generally are regarded as undesirable. Attempts at eliminating such rodents by increasing predation (including traps, microbiological agents, toxicants) have been relatively unsuccessful. Management by environmental manipulation must be basic. This then can be supplemented with predation at critical points where public health, use practices, or imperfections in the system demand. Society mores, practices, and economic considerations also have significant impact on the management system

Short-wave albedo of a pine forest

Energy Technology Data Exchange (ETDEWEB)

Kessler, A.

1985-06-01

In this paper nine years of continuous records of the short-wave albedo above a Scotch pine forest in middle Europe were analysed. Special emphasis was given to the dependencies of the albedo on its diurnal variation, its annual variation, the solar altitude, the structure of the stand, the cloud cover, the soil moisture and the spectral reflectance. A long-termed trend of the albedo could not be found, e.g. caused by the stand growth. Finally the annual variation of the albedo of the Scotch pine forest was compared with measurements above different surface types in middle Europe.

Cloud-Top Entrainment in Stratocumulus Clouds

Science.gov (United States)

Mellado, Juan Pedro

2017-01-01

Cloud entrainment, the mixing between cloudy and clear air at the boundary of clouds, constitutes one paradigm for the relevance of small scales in the Earth system: By regulating cloud lifetimes, meter- and submeter-scale processes at cloud boundaries can influence planetary-scale properties. Understanding cloud entrainment is difficult given the complexity and diversity of the associated phenomena, which include turbulence entrainment within a stratified medium, convective instabilities driven by radiative and evaporative cooling, shear instabilities, and cloud microphysics. Obtaining accurate data at the required small scales is also challenging, for both simulations and measurements. During the past few decades, however, high-resolution simulations and measurements have greatly advanced our understanding of the main mechanisms controlling cloud entrainment. This article reviews some of these advances, focusing on stratocumulus clouds, and indicates remaining challenges.

Cloud type comparisons of AIRS, CloudSat, and CALIPSO cloud height and amount

Directory of Open Access Journals (Sweden)

B. H. Kahn

2008-03-01

Full Text Available The precision of the two-layer cloud height fields derived from the Atmospheric Infrared Sounder (AIRS is explored and quantified for a five-day set of observations. Coincident profiles of vertical cloud structure by CloudSat, a 94 GHz profiling radar, and the Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO, are compared to AIRS for a wide range of cloud types. Bias and variability in cloud height differences are shown to have dependence on cloud type, height, and amount, as well as whether CloudSat or CALIPSO is used as the comparison standard. The CloudSat-AIRS biases and variability range from −4.3 to 0.5±1.2–3.6 km for all cloud types. Likewise, the CALIPSO-AIRS biases range from 0.6–3.0±1.2–3.6 km (−5.8 to −0.2±0.5–2.7 km for clouds ≥7 km (<7 km. The upper layer of AIRS has the greatest sensitivity to Altocumulus, Altostratus, Cirrus, Cumulonimbus, and Nimbostratus, whereas the lower layer has the greatest sensitivity to Cumulus and Stratocumulus. Although the bias and variability generally decrease with increasing cloud amount, the ability of AIRS to constrain cloud occurrence, height, and amount is demonstrated across all cloud types for many geophysical conditions. In particular, skill is demonstrated for thin Cirrus, as well as some Cumulus and Stratocumulus, cloud types infrared sounders typically struggle to quantify. Furthermore, some improvements in the AIRS Version 5 operational retrieval algorithm are demonstrated. However, limitations in AIRS cloud retrievals are also revealed, including the existence of spurious Cirrus near the tropopause and low cloud layers within Cumulonimbus and Nimbostratus clouds. Likely causes of spurious clouds are identified and the potential for further improvement is discussed.

Advancing the quantification of humid tropical forest cover loss with multi-resolution optical remote sensing data: Sampling & wall-to-wall mapping

Science.gov (United States)

Broich, Mark

Humid tropical forest cover loss is threatening the sustainability of ecosystem goods and services as vast forest areas are rapidly cleared for industrial scale agriculture and tree plantations. Despite the importance of humid tropical forest in the provision of ecosystem services and economic development opportunities, the spatial and temporal distribution of forest cover loss across large areas is not well quantified. Here I improve the quantification of humid tropical forest cover loss using two remote sensing-based methods: sampling and wall-to-wall mapping. In all of the presented studies, the integration of coarse spatial, high temporal resolution data with moderate spatial, low temporal resolution data enable advances in quantifying forest cover loss in the humid tropics. Imagery from the Moderate Resolution Imaging Spectroradiometer (MODIS) are used as the source of coarse spatial resolution, high temporal resolution data and imagery from the Landsat Enhanced Thematic Mapper Plus (ETM+) sensor are used as the source of moderate spatial, low temporal resolution data. In a first study, I compare the precision of different sampling designs for the Brazilian Amazon using the annual deforestation maps derived by the Brazilian Space Agency for reference. I show that sampling designs can provide reliable deforestation estimates; furthermore, sampling designs guided by MODIS data can provide more efficient estimates than the systematic design used for the United Nations Food and Agricultural Organization Forest Resource Assessment 2010. Sampling approaches, such as the one demonstrated, are viable in regions where data limitations, such as cloud contamination, limit exhaustive mapping methods. Cloud-contaminated regions experiencing high rates of change include Insular Southeast Asia, specifically Indonesia and Malaysia. Due to persistent cloud cover, forest cover loss in Indonesia has only been mapped at a 5-10 year interval using photo interpretation of single

A comparison of shock-cloud and wind-cloud interactions: effect of increased cloud density contrast on cloud evolution

Science.gov (United States)

Goldsmith, K. J. A.; Pittard, J. M.

2018-05-01

The similarities, or otherwise, of a shock or wind interacting with a cloud of density contrast χ = 10 were explored in a previous paper. Here, we investigate such interactions with clouds of higher density contrast. We compare the adiabatic hydrodynamic interaction of a Mach 10 shock with a spherical cloud of χ = 103 with that of a cloud embedded in a wind with identical parameters to the post-shock flow. We find that initially there are only minor morphological differences between the shock-cloud and wind-cloud interactions, compared to when χ = 10. However, once the transmitted shock exits the cloud, the development of a turbulent wake and fragmentation of the cloud differs between the two simulations. On increasing the wind Mach number, we note the development of a thin, smooth tail of cloud material, which is then disrupted by the fragmentation of the cloud core and subsequent `mass-loading' of the flow. We find that the normalized cloud mixing time (tmix) is shorter at higher χ. However, a strong Mach number dependence on tmix and the normalized cloud drag time, t_{drag}^' }, is not observed. Mach-number-dependent values of tmix and t_{drag}^' } from comparable shock-cloud interactions converge towards the Mach-number-independent time-scales of the wind-cloud simulations. We find that high χ clouds can be accelerated up to 80-90 per cent of the wind velocity and travel large distances before being significantly mixed. However, complete mixing is not achieved in our simulations and at late times the flow remains perturbed.

Cloud Computing, Tieto Cloud Server Model

OpenAIRE

Suikkanen, Saara

2013-01-01

The purpose of this study is to find out what is cloud computing. To be able to make wise decisions when moving to cloud or considering it, companies need to understand what cloud is consists of. Which model suits best to they company, what should be taken into account before moving to cloud, what is the cloud broker role and also SWOT analysis of cloud? To be able to answer customer requirements and business demands, IT companies should develop and produce new service models. IT house T...

Can a native rodent species limit the invasive potential of a non-native rodent species in tropical agroforest habitats?

Science.gov (United States)

Stuart, Alexander M; Prescott, Colin V; Singleton, Grant R

2016-06-01

Little is known about native and non-native rodent species interactions in complex tropical agroecosystems. We hypothesised that the native non-pest rodent Rattus everetti may be competitively dominant over the invasive pest rodent Rattus tanezumi within agroforests. We tested this experimentally by using pulse removal for three consecutive months to reduce populations of R. everetti in agroforest habitat, and assessed over 6 months the response of R. tanezumi and other rodent species. Following removal, R. everetti individuals rapidly immigrated into removal sites. At the end of the study period, R. tanezumi were larger and there was a significant shift in their microhabitat use with respect to the use of ground vegetation cover following the perturbation of R. everetti. Irrespective of treatment, R. tanezumi selected microhabitat with less tree canopy cover, indicative of severely disturbed habitat, whereas R. everetti selected microhabitat with a dense canopy. Our results suggest that sustained habitat disturbance in agroforests favours R. tanezumi, while the regeneration of agroforests towards a more natural state would favour native species and may reduce pest pressure in adjacent crops. In addition, the rapid recolonisation of R. everetti suggests this species would be able to recover from non-target impacts of short-term rodent pest control. © 2015 Society of Chemical Industry. © 2015 Society of Chemical Industry.

Estimation of absorbed radiation dose rates in wild rodents inhabiting a site severely contaminated by the Fukushima Dai-ichi nuclear power plant accident.

Science.gov (United States)

Kubota, Yoshihisa; Takahashi, Hiroyuki; Watanabe, Yoshito; Fuma, Shoichi; Kawaguchi, Isao; Aoki, Masanari; Kubota, Masahide; Furuhata, Yoshiaki; Shigemura, Yusaku; Yamada, Fumio; Ishikawa, Takahiro; Obara, Satoshi; Yoshida, Satoshi

2015-04-01

The dose rates of radiation absorbed by wild rodents inhabiting a site severely contaminated by the Fukushima Dai-ichi Nuclear Power Plant accident were estimated. The large Japanese field mouse (Apodemus speciosus), also called the wood mouse, was the major rodent species captured in the sampling area, although other species of rodents, such as small field mice (Apodemus argenteus) and Japanese grass voles (Microtus montebelli), were also collected. The external exposure of rodents calculated from the activity concentrations of radiocesium ((134)Cs and (137)Cs) in litter and soil samples using the ERICA (Environmental Risk from Ionizing Contaminants: Assessment and Management) tool under the assumption that radionuclides existed as the infinite plane isotropic source was almost the same as those measured directly with glass dosimeters embedded in rodent abdomens. Our findings suggest that the ERICA tool is useful for estimating external dose rates to small animals inhabiting forest floors; however, the estimated dose rates showed large standard deviations. This could be an indication of the inhomogeneous distribution of radionuclides in the sampled litter and soil. There was a 50-fold difference between minimum and maximum whole-body activity concentrations measured in rodents at the time of capture. The radionuclides retained in rodents after capture decreased exponentially over time. Regression equations indicated that the biological half-life of radiocesium after capture was 3.31 d. At the time of capture, the lowest activity concentration was measured in the lung and was approximately half of the highest concentration measured in the mixture of muscle and bone. The average internal absorbed dose rate was markedly smaller than the average external dose rate (sampling area was estimated to be approximately 52 μGy h(-1) (1.2 mGy d(-1)), even 3 years after the accident. This dose rate exceeds 0.1-1 mGy d(-1) derived consideration reference level for Reference rat

Long-term changes in the water quality of rainfall, cloud water and stream water for moorland, forested and clear-felled catchments at Plynlimon, mid-Wales

Directory of Open Access Journals (Sweden)

C. Neal

2001-01-01

Full Text Available Long term changes in the water quality of rainfall, cloud water and stream waters draining acidic and acid sensitive moorland and forested catchments at Plynlimon, mid-Wales, are examined for the period 1983 to 2001. Atmospheric inputs of chloride and sulphate are influenced by the relative inputs of clean maritime and polluted land based air masses. There is no systematic increase or decrease over time for chloride and non-sea-salt sulphate. Rather, there is a decadal scale process possibly representative of the influence of the North Atlantic Oscillation that affects the maritime and pollution climate of the Atlantic seaboard of the UK. Over 17 years of study, there may be a small decrease in non-sea-salt sulphate of about 10 μeq l-1 and a small improvement in acid neutralising capacity of about 20 to 30 μeq l-1 in rainfall. There is a clear improvement in cloud water chemistry with respect to pollutant components (ammonium, nitrate, non-sea-salt sulphate and acidity (acid neutralising capacity improved by about 300 μeq l-1 through the study period. Many of the changes in cloud water chemistry are similar to rainfall over the same period except the magnitude of change is larger for the cloud water. Within the streams, there is some evidence for reductions in acidity as reflected by acid neutralising capacity becoming less negative. For one stream, deforestation occurred during the sampling period and this led to large increases in nitrate and smaller increases in aluminium midway through the study period. However, the climate and hydrological variability largely masked out other changes. The current analysis provides only a start to identifying trends for such a complex and variable environmental system. The need for strong statistical tools is emphasised to resolve issues of: (a hydrological induced water quality variability, (b changing soil and groundwater "endmember" chemistry contribution to the stream and (c the non-linear patterns of

Fog and precipitation chemistry at a mid-land forest in central Taiwan.

Science.gov (United States)

Liang, Yang-Ling; Lin, Teng-Chiu; Hwong, Jeen-Liang; Lin, Neng-Huei; Wang, Chiao-Ping

2009-01-01

We analyzed fog and bulk precipitation chemistry at a cloud forest in central Taiwan where mountain agriculture activities are highest. There were 320 foggy days (visibility agriculture has a major impact on atmospheric deposition at the surrounding forest ecosystems. The input of inorganic N reached 125 kg N ha(-1) yr(-1) and likely exceeded the biological demand of the forest ecosystem. Sulfate is the most abundant anion in fog at Chi-tou and in precipitation at various forests throughout Taiwan, suggesting that the emission and transport of large quantities of SO(2,) the precursor of SO(4)(2-), is an island-wide environmental issue.

Testing the limits of Rodent Sperm Analysis: azoospermia in an otherwise healthy wild rodent population.

Science.gov (United States)

Tannenbaum, Lawrence V; Thran, Brandolyn H; Willams, Keith J

2009-01-01

By comparing the sperm parameters of small rodents trapped at contaminated terrestrial sites and nearby habitat-matched noncontaminated locations, the patent-pending Rodent Sperm Analysis (RSA) method provides a direct health status appraisal for the maximally chemical-exposed mammalian ecological receptor in the wild. RSA outcomes have consistently allowed for as definitive determinations of receptor health as are possible at the present time, thereby streamlining the ecological risk assessment (ERA) process. Here, we describe the unanticipated discovery, at a contaminated US EPA Superfund National Priorities List site, of a population of Hispid cotton rats (Sigmodon hispidus), with a high percentage of adult males lacking sperm entirely (azoospermia). In light of the RSA method's role in streamlining ERAs and in bringing contaminated Superfund-type site investigations to closure, we consider the consequences of the discovery. The two matters specifically discussed are (1) the computation of a population's average sperm count where azoospermia is present and (2) the merits of the RSA method and its sperm parameter thresholds-for-effect when azoospermia is masked in an otherwise apparently healthy rodent population.

Forecasting rodent outbreaks in Africa

DEFF Research Database (Denmark)

Leirs, Herwig; Verhagen, Ron; Verheyen, Walter

1996-01-01

1. Rainfall data were collated for years preceding historical outbreaks of Mastomys rats in East Africa in order to test the hypothesis that such outbreaks occur after long dry periods. 2. Rodent outbreaks were generally not preceded by long dry periods. 3. Population dynamics of Mastomys...... natalensis rats in Tanzania are significantly affected by the distribution of rainfall during the rainy season. 4. All previous rodent outbreaks in Tanzania were preceded by abundant rainfall early in the rainy season, i.e, towards the end of the year. 5. A flow chart is constructed to assess the likelihood...

Old World hantaviruses in rodents in New Orleans, Louisiana.

Science.gov (United States)

Cross, Robert W; Waffa, Bradley; Freeman, Ashley; Riegel, Claudia; Moses, Lina M; Bennett, Andrew; Safronetz, David; Fischer, Elizabeth R; Feldmann, Heinz; Voss, Thomas G; Bausch, Daniel G

2014-05-01

Seoul virus, an Old World hantavirus, is maintained in brown rats and causes a mild form of hemorrhagic fever with renal syndrome (HFRS) in humans. We captured rodents in New Orleans, Louisiana and tested them for the presence of Old World hantaviruses by reverse transcription polymerase chain reaction (RT-PCR) with sequencing, cell culture, and electron microscopy; 6 (3.4%) of 178 rodents captured--all brown rats--were positive for a Seoul virus variant previously coined Tchoupitoulas virus, which was noted in rodents in New Orleans in the 1980s. The finding of Tchoupitoulas virus in New Orleans over 25 years since its first discovery suggests stable endemicity in the city. Although the degree to which this virus causes human infection and disease remains unknown, repeated demonstration of Seoul virus in rodent populations, recent cases of laboratory-confirmed HFRS in some US cities, and a possible link with hypertensive renal disease warrant additional investigation in both rodents and humans.

+Cloud: An Agent-Based Cloud Computing Platform

OpenAIRE

González, Roberto; Hernández de la Iglesia, Daniel; de la Prieta Pintado, Fernando; Gil González, Ana Belén

2017-01-01

Cloud computing is revolutionizing the services provided through the Internet, and is continually adapting itself in order to maintain the quality of its services. This study presents the platform +Cloud, which proposes a cloud environment for storing information and files by following the cloud paradigm. This study also presents Warehouse 3.0, a cloud-based application that has been developed to validate the services provided by +Cloud.

Primates as Predictors of Mammal Community Diversity in the Forest Ecosystems of Madagascar

Science.gov (United States)

Muldoon, Kathleen M.; Goodman, Steven M.

2015-01-01

The geographic distribution of species is the typical metric for identifying priority areas for conservation. Since most biodiversity remains poorly studied, a subset of charismatic species, such as primates, often stand as surrogates for total biodiversity. A central question is therefore, how effectively do primates predict the pooled species richness of other mammalian taxa? We used lemurs as indicator species to predict total non-primate mammal community richness in the forest ecosystems of Madagascar. We combine environmental and species occurrence data to ascertain the extent to which primate diversity can predict (1) non-primate mammal α-diversity (species richness), (2) non-primate complementarity, and (3) non-primate β-diversity (species turnover). Our results indicate that primates are effective predictors of non-primate mammal community diversity in the forest ecosystems of Madagascar after controlling for habitat. When individual orders of mammals are considered, lemurs effectively predict the species richness of carnivorans and rodents (but not afrosoricids), complementarity of rodents (but not carnivorans or afrosoricids), and all individual components of β-diversity. We conclude that lemurs effectively predict total non-primate community richness. However, surrogate species alone cannot achieve complete representation of biodiversity. PMID:26334525

LiDAR and DTM Data from Tapajos National Forest in Para, Brazil, 2008

Data.gov (United States)

National Aeronautics and Space Administration — This data set provides LiDAR point clouds and digital terrain models (DTM) from surveys over the Tapajos National Forest in Belterra municipality, Para, Brazil...

APPLICABILITY ANALYSIS OF CLOTH SIMULATION FILTERING ALGORITHM FOR MOBILE LIDAR POINT CLOUD

Directory of Open Access Journals (Sweden)

S. Cai

2018-04-01

Full Text Available Classifying the original point clouds into ground and non-ground points is a key step in LiDAR (light detection and ranging data post-processing. Cloth simulation filtering (CSF algorithm, which based on a physical process, has been validated to be an accurate, automatic and easy-to-use algorithm for airborne LiDAR point cloud. As a new technique of three-dimensional data collection, the mobile laser scanning (MLS has been gradually applied in various fields, such as reconstruction of digital terrain models (DTM, 3D building modeling and forest inventory and management. Compared with airborne LiDAR point cloud, there are some different features (such as point density feature, distribution feature and complexity feature for mobile LiDAR point cloud. Some filtering algorithms for airborne LiDAR data were directly used in mobile LiDAR point cloud, but it did not give satisfactory results. In this paper, we explore the ability of the CSF algorithm for mobile LiDAR point cloud. Three samples with different shape of the terrain are selected to test the performance of this algorithm, which respectively yields total errors of 0.44 %, 0.77 % and1.20 %. Additionally, large area dataset is also tested to further validate the effectiveness of this algorithm, and results show that it can quickly and accurately separate point clouds into ground and non-ground points. In summary, this algorithm is efficient and reliable for mobile LiDAR point cloud.

Lassa fever or lassa hemorrhagic fever risk to humans from rodent-borne zoonoses.

Science.gov (United States)

El-Bahnasawy, Mamdouh M; Megahed, Laila Abdel-Mawla; Abdalla Saleh, Hala Ahmed; Morsy, Tosson A

2015-04-01

Viral hemorrhagic fevers (VHFs) typically manifest as rapidly progressing acute febrile syndromes with profound hemorrhagic manifestations and very high fatality rates. Lassa fever, an acute hemorrhagic fever characterized by fever, muscle aches, sore throat, nausea, vomiting, diarrhea and chest and abdominal pain. Rodents are important reservoirs of rodent-borne zoonosis worldwide. Transmission rodents to humans occur by aerosol spread, either from the genus Mastomys rodents' excreta (multimammate rat) or through the close contact with infected patients (nosocomial infection). Other rodents of the genera Rattus, Mus, Lemniscomys, and Praomys are incriminated rodents hosts. Now one may ask do the rodents' ectoparasites play a role in Lassa virus zoonotic transmission. This paper summarized the update knowledge on LHV; hopping it might be useful to the clinicians, nursing staff, laboratories' personals as well as those concerned zoonoses from rodents and rodent control.

Using Airborne LIDAR Data for Assessment of Forest Fire Fuel Load Potential

Science.gov (United States)

İnan, M.; Bilici, E.; Akay, A. E.

2017-11-01

Forest fire incidences are one of the most detrimental disasters that may cause long terms effects on forest ecosystems in many parts of the world. In order to minimize environmental damages of fires on forest ecosystems, the forested areas with high fire risk should be determined so that necessary precaution measurements can be implemented in those areas. Assessment of forest fire fuel load can be used to estimate forest fire risk. In order to estimate fuel load capacity, forestry parameters such as number of trees, tree height, tree diameter, crown diameter, and tree volume should be accurately measured. In recent years, with the advancements in remote sensing technology, it is possible to use airborne LIDAR for data estimation of forestry parameters. In this study, the capabilities of using LIDAR based point cloud data for assessment of the forest fuel load potential was investigated. The research area was chosen in the Istanbul Bentler series of Bahceköy Forest Enterprise Directorate that composed of mixed deciduous forest structure.

Silicon Photonics Cloud (SiCloud)

DEFF Research Database (Denmark)

DeVore, P. T. S.; Jiang, Y.; Lynch, M.

2015-01-01

Silicon Photonics Cloud (SiCloud.org) is the first silicon photonics interactive web tool. Here we report new features of this tool including mode propagation parameters and mode distribution galleries for user specified waveguide dimensions and wavelengths.......Silicon Photonics Cloud (SiCloud.org) is the first silicon photonics interactive web tool. Here we report new features of this tool including mode propagation parameters and mode distribution galleries for user specified waveguide dimensions and wavelengths....

Quantifying Uncertainty in Satellite-Retrieved Land Surface Temperature from Cloud Detection Errors

Directory of Open Access Journals (Sweden)

Claire E. Bulgin

2018-04-01

Full Text Available Clouds remain one of the largest sources of uncertainty in remote sensing of surface temperature in the infrared, but this uncertainty has not generally been quantified. We present a new approach to do so, applied here to the Advanced Along-Track Scanning Radiometer (AATSR. We use an ensemble of cloud masks based on independent methodologies to investigate the magnitude of cloud detection uncertainties in area-average Land Surface Temperature (LST retrieval. We find that at a grid resolution of 625 km 2 (commensurate with a 0.25 ∘ grid size at the tropics, cloud detection uncertainties are positively correlated with cloud-cover fraction in the cell and are larger during the day than at night. Daytime cloud detection uncertainties range between 2.5 K for clear-sky fractions of 10–20% and 1.03 K for clear-sky fractions of 90–100%. Corresponding night-time uncertainties are 1.6 K and 0.38 K, respectively. Cloud detection uncertainty shows a weaker positive correlation with the number of biomes present within a grid cell, used as a measure of heterogeneity in the background against which the cloud detection must operate (e.g., surface temperature, emissivity and reflectance. Uncertainty due to cloud detection errors is strongly dependent on the dominant land cover classification. We find cloud detection uncertainties of a magnitude of 1.95 K over permanent snow and ice, 1.2 K over open forest, 0.9–1 K over bare soils and 0.09 K over mosaic cropland, for a standardised clear-sky fraction of 74.2%. As the uncertainties arising from cloud detection errors are of a significant magnitude for many surface types and spatially heterogeneous where land classification varies rapidly, LST data producers are encouraged to quantify cloud-related uncertainties in gridded products.

Radio-ecological conditions of band coniferous forests

International Nuclear Information System (INIS)

Strilchuk, Yu.G.; Osintsev, A.Yu.; Kuzin, D.E.; Bryantseva, N.V.; Tonevitskaya, O.V.; Zhadyranova, A.A.; Kashirskij, V.V.; Korovina, O.Yu.; Lukashenko, S.N.

2008-01-01

Full text: Band coniferous forests are located at the right bank of Irtysh river in two oblasts of Kazakhstan - East Kazakhstan and Pavlodar.This is a unique and only forest of this type. Something similar to this natural treasure with climate-regulating, sanitary, soil-protective, water-preserving functions can be found in Canada only. Total area of the band forest comprises 870500 hectares. The forest is mainly presented by pines (Pinus silvestris). These forests are of relict nature and are of great environmental, social and economic value. The band forests located in northern, north-western and western parts of SNTS were subjected several time to radioactive impacts from atmospheric nuclear tests performed at SNTS. Nuclear clouds from 12 ground and 28 atmospheric explosions passed over these territories. Four nuclear tests performed on 29th of August 1949, 29th of July 1955, 7th of August 1962 and 26th of November 1962 resulted in higher radiation dose rates registered on land there. It seems that this particular tests stipulated radioactive contamination of the forests. The first nuclear test performed on 29th of August 1949 resulted in considerable radioactive contamination of the band forests. Contamination was registerd in Novopokrovskij and Beskaragajskij districts of Semipalatinsk oblast as well as in several districts of Altai Territory. The second test that could bring radioactive contamination to the forests was performed on 7th of August 1962 when instead of planned atmospheric explosion, there was achieved surface explosion with comparatively high radioactive contamination of the lands towards Altai Territory. Within the State program ''Forest preservation and expansion of forest in the Republic of Kazakhstan'' there was performed in 2006 a radiological surveying of the lands in pipe forest of near-Irtysh region. There were studied soil and vegetation as well as woods of the band coniferous forests. Part of territory, wherethrough nuclear clouds went

Cloud water interception and canopy water balance in the Hawaiian Islands: preliminary results and emerging patterns

Science.gov (United States)

Tseng, H.; Giambelluca, T. W.; DeLay, J. K.; Nullet, M.

2017-12-01

Steep climate gradients and diverse ecosystems make the Hawaiian Islands an ideal laboratory for ecohydrological experiments. Researchers are able to control physical and ecological variables, which is difficult for most environmental studies, by selecting sites along these gradients. Tropical montane forests, especially those situated in the cloud zone, are known to improve recharge and sustain baseflow. This is probably the result of frequent and persistent fog characteristic to these systems. During fog events, evapotranspiration is suppressed due to high humidity and reduced solar radiation. Moreover, cloud water interception by the forest canopy can produce fog drip and contribute significantly to the local water budget. Because the interception process is a complex interaction between the atmosphere and the vegetation, the effects of the meteorological conditions and canopy characteristics are equally important and sometimes hard to separate. This study aims to examine patterns in cloud water interception and canopy water balance across five tropical montane forest sites on three of the main islands of Hawaii. The sites cover a range of elevations between 1100- 2114 m, annual rainfall between 1155-3375 mm, and different dominant plant species with canopy heights ranging from 1.5 m to 30 m. We investigate the effect of climatic factors by comparing passive fog gauge measurements and other meteorological variables, then examine the differences in canopy water balance by comparing throughfall and stemflow measurements at these sites. While this study is ongoing, we present the first few months of field observations and the results of preliminary analyses. This study will improve understanding of how large-scale climate and vegetation factors interact to control cloud water interception and will inform ongoing watershed management. This is particularly important for oceanic islands such as Hawaii because they rely on precipitation entirely for water supply and

Cloud Processed CCN Suppress Stratus Cloud Drizzle

Science.gov (United States)

Hudson, J. G.; Noble, S. R., Jr.

2017-12-01

Conversion of sulfur dioxide to sulfate within cloud droplets increases the sizes and decreases the critical supersaturation, Sc, of cloud residual particles that had nucleated the droplets. Since other particles remain at the same sizes and Sc a size and Sc gap is often observed. Hudson et al. (2015) showed higher cloud droplet concentrations (Nc) in stratus clouds associated with bimodal high-resolution CCN spectra from the DRI CCN spectrometer compared to clouds associated with unimodal CCN spectra (not cloud processed). Here we show that CCN spectral shape (bimodal or unimodal) affects all aspects of stratus cloud microphysics and drizzle. Panel A shows mean differential cloud droplet spectra that have been divided according to traditional slopes, k, of the 131 measured CCN spectra in the Marine Stratus/Stratocumulus Experiment (MASE) off the Central California coast. K is generally high within the supersaturation, S, range of stratus clouds (< 0.5%). Because cloud processing decreases Sc of some particles, it reduces k. Panel A shows higher concentrations of small cloud droplets apparently grown on lower k CCN than clouds grown on higher k CCN. At small droplet sizes the concentrations follow the k order of the legend, black, red, green, blue (lowest to highest k). Above 13 µm diameter the lines cross and the hierarchy reverses so that blue (highest k) has the highest concentrations followed by green, red and black (lowest k). This reversed hierarchy continues into the drizzle size range (panel B) where the most drizzle drops, Nd, are in clouds grown on the least cloud-processed CCN (blue), while clouds grown on the most processed CCN (black) have the lowest Nd. Suppression of stratus cloud drizzle by cloud processing is an additional 2nd indirect aerosol effect (IAE) that along with the enhancement of 1st IAE by higher Nc (panel A) are above and beyond original IAE. However, further similar analysis is needed in other cloud regimes to determine if MASE was

Capability of integrated MODIS imagery and ALOS for oil palm, rubber and forest areas mapping in tropical forest regions.

Science.gov (United States)

Razali, Sheriza Mohd; Marin, Arnaldo; Nuruddin, Ahmad Ainuddin; Shafri, Helmi Zulhaidi Mohd; Hamid, Hazandy Abdul

2014-05-07

Various classification methods have been applied for low resolution of the entire Earth's surface from recorded satellite images, but insufficient study has determined which method, for which satellite data, is economically viable for tropical forest land use mapping. This study employed Iterative Self Organizing Data Analysis Techniques (ISODATA) and K-Means classification techniques to classified Moderate Resolution Imaging Spectroradiometer (MODIS) Surface Reflectance satellite image into forests, oil palm groves, rubber plantations, mixed horticulture, mixed oil palm and rubber and mixed forest and rubber. Even though frequent cloud cover has been a challenge for mapping tropical forests, our MODIS land use classification map found that 2008 ISODATA-1 performed well with overall accuracy of 94%, with the highest Producer's Accuracy of Forest with 86%, and were consistent with MODIS Land Cover 2008 (MOD12Q1), respectively. The MODIS land use classification was able to distinguish young oil palm groves from open areas, rubber and mature oil palm plantations, on the Advanced Land Observing Satellite (ALOS) map, whereas rubber was more easily distinguished from an open area than from mixed rubber and forest. This study provides insight on the potential for integrating regional databases and temporal MODIS data, in order to map land use in tropical forest regions.

Neurobiology of rodent self-grooming and its value for translational neuroscience.

Science.gov (United States)

Kalueff, Allan V; Stewart, Adam Michael; Song, Cai; Berridge, Kent C; Graybiel, Ann M; Fentress, John C

2016-01-01

Self-grooming is a complex innate behaviour with an evolutionarily conserved sequencing pattern and is one of the most frequently performed behavioural activities in rodents. In this Review, we discuss the neurobiology of rodent self-grooming, and we highlight studies of rodent models of neuropsychiatric disorders--including models of autism spectrum disorder and obsessive compulsive disorder--that have assessed self-grooming phenotypes. We suggest that rodent self-grooming may be a useful measure of repetitive behaviour in such models, and therefore of value to translational psychiatry. Assessment of rodent self-grooming may also be useful for understanding the neural circuits that are involved in complex sequential patterns of action.

Improving the Accuracy of Cloud Detection Using Machine Learning

Science.gov (United States)

Craddock, M. E.; Alliss, R. J.; Mason, M.

2017-12-01

Cloud detection from geostationary satellite imagery has long been accomplished through multi-spectral channel differencing in comparison to the Earth's surface. The distinction of clear/cloud is then determined by comparing these differences to empirical thresholds. Using this methodology, the probability of detecting clouds exceeds 90% but performance varies seasonally, regionally and temporally. The Cloud Mask Generator (CMG) database developed under this effort, consists of 20 years of 4 km, 15minute clear/cloud images based on GOES data over CONUS and Hawaii. The algorithms to determine cloudy pixels in the imagery are based on well-known multi-spectral techniques and defined thresholds. These thresholds were produced by manually studying thousands of images and thousands of man-hours to determine the success and failure of the algorithms to fine tune the thresholds. This study aims to investigate the potential of improving cloud detection by using Random Forest (RF) ensemble classification. RF is the ideal methodology to employ for cloud detection as it runs efficiently on large datasets, is robust to outliers and noise and is able to deal with highly correlated predictors, such as multi-spectral satellite imagery. The RF code was developed using Python in about 4 weeks. The region of focus selected was Hawaii and includes the use of visible and infrared imagery, topography and multi-spectral image products as predictors. The development of the cloud detection technique is realized in three steps. First, tuning of the RF models is completed to identify the optimal values of the number of trees and number of predictors to employ for both day and night scenes. Second, the RF models are trained using the optimal number of trees and a select number of random predictors identified during the tuning phase. Lastly, the model is used to predict clouds for an independent time period than used during training and compared to truth, the CMG cloud mask. Initial results

The transient behavior of whole-canopy fluxes during dynamic light conditions for midlatitude and tropical forests

Science.gov (United States)

Fitzjarrald, D. R.; Kivalov, S. N.

2017-12-01

Cloud shadows lead to alternating light and dark periods at the surface. Understanding how clouds affect whole-canopy fluxes suffer from two knowledge gaps that limit scaling from leaf to canopy scales, an effort currently done by assertion alone. First, there is a lack a clear quantitative definition of the incident light time series that occur on specific types of cloudy days. Second, the characteristic time scales for leaves to respond to for stomatal opening and closing is 1-10 minutes, a period too short to allow accurate eddy fluxes. We help to close the first gap by linking the durations of alternating light and dark periods statistically to conventional meteorological sky types at a midlatitude mixed deciduous forest (Harvard Forest, MA, USA: 42.53N, 72.17W) and in a tropical rain forest (Tapajós National Forest, Brazil; 2.86S, 54.96W). The second gap is narrowed by measuring the dynamic response whole canopy exchanges in the flux footprint at intervals of only a few seconds using the classical ensemble average method, keying on step changes in light intensity. Combining light and shadow periods of different lengths we estimate ensemble fluxes sensible heat (H), net ecosystem exchange (NEE), and latent heat (LE) fluxes initiated by abrupt radiation changes at intervals of 30 s over 20 minutes. We present composite results of the transient behavior of whole-canopy fluxes at each forest, showing distinct features of each forest type. Observed time constants and transient flux parameterizations are then used to force a simple model to yield NEE, LE, WUE, and Bowen ratio extrema under periodic shadow-light conditions and given cloud amount. We offer the hypothesis that, at least on certain types of cloudy days, the well-known correlation between diffuse light and WUE does not represent a causal connection at the canopy scale.

Cloud vertical profiles derived from CALIPSO and CloudSat and a comparison with MODIS derived clouds

Science.gov (United States)

Kato, S.; Sun-Mack, S.; Miller, W. F.; Rose, F. G.; Minnis, P.; Wielicki, B. A.; Winker, D. M.; Stephens, G. L.; Charlock, T. P.; Collins, W. D.; Loeb, N. G.; Stackhouse, P. W.; Xu, K.

2008-05-01

CALIPSO and CloudSat from the a-train provide detailed information of vertical distribution of clouds and aerosols. The vertical distribution of cloud occurrence is derived from one month of CALIPSO and CloudSat data as a part of the effort of merging CALIPSO, CloudSat and MODIS with CERES data. This newly derived cloud profile is compared with the distribution of cloud top height derived from MODIS on Aqua from cloud algorithms used in the CERES project. The cloud base from MODIS is also estimated using an empirical formula based on the cloud top height and optical thickness, which is used in CERES processes. While MODIS detects mid and low level clouds over the Arctic in April fairly well when they are the topmost cloud layer, it underestimates high- level clouds. In addition, because the CERES-MODIS cloud algorithm is not able to detect multi-layer clouds and the empirical formula significantly underestimates the depth of high clouds, the occurrence of mid and low-level clouds is underestimated. This comparison does not consider sensitivity difference to thin clouds but we will impose an optical thickness threshold to CALIPSO derived clouds for a further comparison. The effect of such differences in the cloud profile to flux computations will also be discussed. In addition, the effect of cloud cover to the top-of-atmosphere flux over the Arctic using CERES SSF and FLASHFLUX products will be discussed.

Foggy days and dry nights determine crown-level water balance in a seasonal tropical Montane cloud forest.

Science.gov (United States)

Gotsch, Sybil G; Asbjornsen, Heidi; Holwerda, Friso; Goldsmith, Gregory R; Weintraub, Alexis E; Dawson, Todd E

2014-01-01

The ecophysiology of tropical montane cloud forest (TMCF) trees is influenced by crown-level microclimate factors including regular mist/fog water inputs, and large variations in evaporative demand, which in turn can significantly impact water balance. We investigated the effect of such microclimatic factors on canopy ecophysiology and branch-level water balance in the dry season of a seasonal TMCF in Veracruz, Mexico, by quantifying both water inputs (via foliar uptake, FU) and outputs (day- and night-time transpiration, NT). Measurements of sap flow, stomatal conductance, leaf water potential and pressure-volume relations were obtained in Quercus lanceifolia, a canopy-dominant tree species. Our results indicate that FU occurred 34% of the time and led to the recovery of 9% (24 ± 9.1 L) of all the dry-season water transpired from individual branches. Capacity for FU was independently verified for seven additional common tree species. NT accounted for approximately 17% (46 L) of dry-season water loss. There was a strong correlation between FU and the duration of leaf wetness events (fog and/or rain), as well as between NT and the night-time vapour pressure deficit. Our results show the clear importance of fog and NT for the canopy water relations of Q. lanceifolia. © 2013 John Wiley & Sons Ltd.

Multiple Co-infections of Rodents with Hantaviruses, Leptospira, and Babesia in Croatia

Science.gov (United States)

Turk, Nenad; Korva, Miša; Margaletić, Josip; Beck, Relja; Vucelja, Marko; Habuš, Josipa; Svoboda, Petra; Županc, Tatjana Avšič; Henttonen, Heikki; Markotić, Alemka

2012-01-01

Abstract Hantaviruses, Leptospira spp., and Babesia spp. are rodent-borne pathogens present worldwide. We studied multiple co-infections of small rodents in Croatia with all three pathogens. Twenty-eight Apodemus flavicollis and 16 Myodes glareolus were tested for the presence of hantavirus RNA by real-time RT-PCR, Leptospira strains by renoculture method and Babesia DNA by PCR. Anti-hantavirus antibodies and anti-Leptospira antibodies were detected by serological methods. Very high infection rates with each pathogen were found in A. flavicollis: 20 of 28 rodents (71%) were infected with Dobrava virus, 13 rodents (46%) were infected with Leptospira, and 5 rodents (18%) were infected with Babesia. Multiple co-infections with all three pathogens were found in 3 of 28 (11%) A. flavicollis animals, suggesting that the same rodent host can be infected with several pathogens at the same time. Dual infections with both hantaviruses and Leptospira were found in 7 of 44 rodents (16%), with hantaviruses and Babesia in 2 rodents (5%), and double infection with both Leptospira and Babesia were found in 1 rodent (2%). Since hantaviruses, Leptospira, and Babesia have similar geographical distributions, it is to be expected that in other parts of the world multiple co-infections, representing a serious threat to public health, can be found. PMID:22217170

Mapping Global Forest Aboveground Biomass with Spaceborne LiDAR, Optical Imagery, and Forest Inventory Data

Directory of Open Access Journals (Sweden)

Tianyu Hu

2016-07-01

Full Text Available As a large carbon pool, global forest ecosystems are a critical component of the global carbon cycle. Accurate estimations of global forest aboveground biomass (AGB can improve the understanding of global carbon dynamics and help to quantify anthropogenic carbon emissions. Light detection and ranging (LiDAR techniques have been proven that can accurately capture both horizontal and vertical forest structures and increase the accuracy of forest AGB estimation. In this study, we mapped the global forest AGB density at a 1-km resolution through the integration of ground inventory data, optical imagery, Geoscience Laser Altimeter System/Ice, Cloud, and Land Elevation Satellite data, climate surfaces, and topographic data. Over 4000 ground inventory records were collected from published literatures to train the forest AGB estimation model and validate the resulting global forest AGB product. Our wall-to-wall global forest AGB map showed that the global forest AGB density was 210.09 Mg/ha on average, with a standard deviation of 109.31 Mg/ha. At the continental level, Africa (333.34 ± 63.80 Mg/ha and South America (301.68 ± 67.43 Mg/ha had higher AGB density. The AGB density in Asia, North America and Europe were 172.28 ± 94.75, 166.48 ± 84.97, and 132.97 ± 50.70 Mg/ha, respectively. The wall-to-wall forest AGB map was evaluated at plot level using independent plot measurements. The adjusted coefficient of determination (R2 and root-mean-square error (RMSE between our predicted results and the validation plots were 0.56 and 87.53 Mg/ha, respectively. At the ecological zone level, the R2 and RMSE between our map and Intergovernmental Panel on Climate Change suggested values were 0.56 and 101.21 Mg/ha, respectively. Moreover, a comprehensive comparison was also conducted between our forest AGB map and other published regional AGB products. Overall, our forest AGB map showed good agreements with these regional AGB products, but some of the regional

Fuzzy AutoEncode Based Cloud Detection for Remote Sensing Imagery

Directory of Open Access Journals (Sweden)

Zhenfeng Shao

2017-03-01

Full Text Available Cloud detection of remote sensing imagery is quite challenging due to the influence of complicated underlying surfaces and the variety of cloud types. Currently, most of the methods mainly rely on prior knowledge to extract features artificially for cloud detection. However, these features may not be able to accurately represent the cloud characteristics under complex environment. In this paper, we adopt an innovative model named Fuzzy Autoencode Model (FAEM to integrate the feature learning ability of stacked autoencode networks and the detection ability of fuzzy function for highly accurate cloud detection on remote sensing imagery. Our proposed method begins by selecting and fusing spectral, texture, and structure information. Thereafter, the proposed technique established a FAEM to learn the deep discriminative features from a great deal of selected information. Finally, the learned features are mapped to the corresponding cloud density map with a fuzzy function. To demonstrate the effectiveness of the proposed method, 172 Landsat ETM+ images and 25 GF-1 images with different spatial resolutions are used in this paper. For the convenience of accuracy assessment, ground truth data are manually outlined. Results show that the average RER (ratio of right rate and error rate on Landsat images is greater than 29, while the average RER of Support Vector Machine (SVM is 21.8 and Random Forest (RF is 23. The results on GF-1 images exhibit similar performance as Landsat images with the average RER of 25.9, which is much higher than the results of SVM and RF. Compared to traditional methods, our technique has attained higher average cloud detection accuracy for either different spatial resolutions or various land surfaces.

A simple algorithm for large-scale mapping of evergreen forests in tropical America, Africa and Asia

Science.gov (United States)

Xiangming Xiao; Chandrashekhar M. Biradar; Christina Czarnecki; Tunrayo Alabi; Michael Keller

2009-01-01

The areal extent and spatial distribution of evergreen forests in the tropical zones are important for the study of climate, carbon cycle and biodiversity. However, frequent cloud cover in the tropical regions makes mapping evergreen forests a challenging task. In this study we developed a simple and novel mapping algorithm that is based on the temporal profile...

Quantifying Structural and Compositional Changes in Forest Cover in NW Yunnan, China

Science.gov (United States)

Hakkenberg, C.

2012-12-01

NW Yunnan, China is a region renowned for high levels of biodiversity, endemism and genetically distinct refugial plant populations. It is also a focal area for China's national reforestation efforts like the Natural Forest Protection Program (NFPP), intended to control erosion in the Upper Yangtze watershed. As part of a larger project to investigate the role of reforestation programs in facilitating the emergence of increasingly species-rich forest communities on a previously degraded and depauperate land mosaic in montane SW China, this study uses a series of Landsat TM images to quantify the spatial pattern and rate of structural and compositional change in forests recovering from medium to large-scale disturbances in the area over the past 25 years. Beyond the fundamental need to assess the outcomes of one of the world's largest reforestation programs, this research offers approaches to confronting two critical methodological issues: (1) techniques for characterizing subtle changes in the nature of vegetation cover, and (2) reducing change detection uncertainty due to persistent cloud cover and shadow. To address difficulties in accurately assessing the structure and composition of vegetative regrowth, a biophysical model was parameterized with over 300 ground-truthed canopy cover assessment points to determine pattern and rate of long-term vegetation changes. To combat pervasive shadow and cloud cover, an interactive generalized additive model (GAM) model based on topographic and spatial predictors was used to overcome some of the constraints of satellite image analysis in Himalayan regions characterized by extreme topography and extensive cloud cover during the summer monsoon. The change detection is assessed for accuracy using ground-truthed observations in a variety of forest cover types and topographic positions. Results indicate effectiveness in reducing the areal extent of unclassified regions and increasing total change detection accuracy. In addition

Tularemia and plague survey in rodents in an earthquake zone in southeastern Iran

Science.gov (United States)

Gyuranecz, Miklós

2015-01-01

OBJECTIVES: Earthquakes are one the most common natural disasters that lead to increased mortality and morbidity from transmissible diseases, partially because the rodents displaced by an earthquake can lead to an increased rate of disease transmission. The aim of this study was to evaluate the prevalence of plague and tularemia in rodents in the earthquake zones in southeastern Iran. METHODS: In April 2013, a research team was dispatched to explore the possible presence of diseases in rodents displaced by a recent earthquake magnitude 7.7 around the cities of Khash and Saravan in Sistan and Baluchestan Province. Rodents were trapped near and in the earthquake zone, in a location where an outbreak of tularemia was reported in 2007. Rodent serums were tested for a serological survey using an enzyme-linked immunosorbent assay. RESULTS: In the 13 areas that were studied, nine rodents were caught over a total of 200 trap-days. Forty-eight fleas and 10 ticks were obtained from the rodents. The ticks were from the Hyalomma genus and the fleas were from the Xenopsylla genus. All the trapped rodents were Tatera indica. Serological results were negative for plague, but the serum agglutination test was positive for tularemia in one of the rodents. Tatera indica has never been previously documented to be involved in the transmission of tularemia. CONCLUSIONS: No evidence of the plague cycle was found in the rodents of the area, but evidence was found of tularemia infection in rodents, as demonstrated by a positive serological test for tularemia in one rodent. PMID:26602769

CMS: LiDAR Data for Mangrove Forests in the Zambezi River Delta, Mozambique, 2014

Data.gov (United States)

National Aeronautics and Space Administration — This data set provides high-resolution LiDAR point cloud data collected during surveys over mangrove forests in the Zambezi River Delta in Mozambique in May 2014....

The bioeconomics of controlling an African rodent pest species

DEFF Research Database (Denmark)

Skonhoft, Anders; Leirs, Herwig; Andreassen, Harry P

2006-01-01

The paper treats the economy of controlling an African pest rodent, the multimammate rat, causing major damage in maize production. An ecological population model is presented and used as a basis for the economic analyses carried out at the village level using data from Tanzania. This model...... incorporates both density-dependent and density-independent (stochastic) factors. Rodents are controlled by applying poison, and the costs are made up of the cost of poison plus the damage to maize production. We analyse how the present-value costs of maize production are affected by various rodent control...

Invertebrates of The H.J. Andrews Experimental Forest, Western Cascades, Oregon: I. An annotated checklist of fleas.

Science.gov (United States)

Robert E. Lewis; Chris Maser

1981-01-01

During a trapping survey of small mammals (approximately 3,000 individuals), species of fleas (1,632 specimens) were collected in the H.J. Andrews Experimental Forest, Western Cascades, Oregon. Host mammals were represented by 15 species—6 insectivores and 9 rodents captured from June through September. The collections extend our knowledge of the fauna of Oregon.

Spatial and temporal patterns of cloud cover and fog inundation in coastal California: Ecological implications

Science.gov (United States)

Rastogi, Bharat; Williams, A. Park; Fischer, Douglas T.; Iacobellis, Sam F.; McEachern, A. Kathryn; Carvalho, Leila; Jones, Charles Leslie; Baguskas, Sara A.; Still, Christopher J.

2016-01-01

The presence of low-lying stratocumulus clouds and fog has been known to modify biophysical and ecological properties in coastal California where forests are frequently shaded by low-lying clouds or immersed in fog during otherwise warm and dry summer months. Summer fog and stratus can ameliorate summer drought stress and enhance soil water budgets, and often have different spatial and temporal patterns. Here we use remote sensing datasets to characterize the spatial and temporal patterns of cloud cover over California’s northern Channel Islands. We found marine stratus to be persistent from May through September across the years 2001-2012. Stratus clouds were both most frequent and had the greatest spatial extent in July. Clouds typically formed in the evening, and dissipated by the following early afternoon. We present a novel method to downscale satellite imagery using atmospheric observations and discriminate patterns of fog from those of stratus and help explain patterns of fog deposition previously studied on the islands. The outcomes of this study contribute significantly to our ability to quantify the occurrence of coastal fog at biologically meaningful spatial and temporal scales that can improve our understanding of cloud-ecosystem interactions, species distributions and coastal ecohydrology.

Chemical Speciation of Water Soluble Ions and Metals of Cloud and Rain Water During the Puerto Rico African Dust and Clouds Study (PRADACS) Campaigns

Science.gov (United States)

Torres, E.; Valle Diaz, C. J.; Lee, T.; Collett, J. L.; Fitzgerald, E.; Cuadra-Rodriguez, L. A.; Prather, K. A.; Sánchez, M.; McDowell, W. H.; Mayol-Bracero, O. L.

2013-05-01

The underlying physico-chemical processes of dust particles interactions are poorly understood; even less understood is how aging impacts cloud properties and climate as the particles travel from Africa to the Caribbean region. Caribbean landmasses have tropical montane cloud forests (TMCFs) that are tightly coupled to the atmospheric hydrologic cycle. TMCFs are ecosystems to study the effects African Dust (AD) on cloud formation and precipitation as these are very sensitive ecosystems that respond to small changes in climate. As part of the Puerto Rico African Dust and Clouds Study (PRADACS), chemical analyses were performed on cloud and rain water samples collected at Pico del Este (PE) station in Luquillo, PR (1051 masl) during campaigns held from 2010 to 2012. At PE, two cloud collectors (i.e., single stage (Aluminum version), a 2-stage (Teflon version) Caltech Active Strand Cloudwater Collector (CASCC)), a rainwater collector, and anAerosol Time-Of-Flight Mass Spectrometer (ATOFMS) were operated. Chemical analyses performed on collected samples include pH, conductivity, ion chromatography (IC), and inductive coupled plasma (ICP). Results from these campaigns showed that on days that had air masses with the influence of AD, cloud water samples had higher conductivity and pH values on average (up to 5.7 and 180μS/cm, respectively) than those with air masses without AD influence. An increase in the concentrations of water-soluble ions like non-sea salt calcium and magnesium, and metals like magnesium, calcium and aluminum was observed and the appearance of iron was seen on ICP analyses. The ATOFMS, showed an increase on the amount of particles during AD influence with composition of aluminum, silicates, potassium, iron and titanium aerosols. The increase on the aforementioned species was constant in the three years of sampling, which give us confidence in the identification of the chemical species that are present during the influence of AD.

Semi-Autonomous Rodent Habitat for Deep Space Exploration

Science.gov (United States)

Alwood, J. S.; Shirazi-Fard, Y.; Pletcher, D.; Globus, R.

2018-01-01

NASA has flown animals to space as part of trailblazing missions and to understand the biological responses to spaceflight. Mice traveled in the Lunar Module with the Apollo 17 astronauts and now mice are frequent research subjects in LEO on the ISS. The ISS rodent missions have focused on unravelling biological mechanisms, better understanding risks to astronaut health, and testing candidate countermeasures. A critical barrier for longer-duration animal missions is the need for humans-in-the-loop to perform animal husbandry and perform routine tasks during a mission. Using autonomous or telerobotic systems to alleviate some of these tasks would enable longer-duration missions to be performed at the Deep Space Gateway. Rodent missions performed using the Gateway as a platform could address a number of critical risks identified by the Human Research Program (HRP), as well as Space Biology Program questions identified by NRC Decadal Survey on Biological and Physical Sciences in Space, (2011). HRP risk areas of potentially greatest relevance that the Gateway rodent missions can address include those related to visual impairment (VIIP) and radiation risks to central nervous system, cardiovascular disease, as well as countermeasure testing. Space Biology focus areas addressed by the Gateway rodent missions include mechanisms and combinatorial effects of microgravity and radiation. The objectives of the work proposed here are to 1) develop capability for semi-autonomous rodent research in cis-lunar orbit, 2) conduct key experiments for testing countermeasures against low gravity and space radiation. The hardware and operations system developed will enable experiments at least one month in duration, which potentially could be extended to one year in duration. To gain novel insights into the health risks to crew of deep space travel (i.e., exposure to space radiation), results obtained from Gateway flight rodents can be compared to ground control groups and separate groups

Stratocumulus Cloud Top Radiative Cooling and Cloud Base Updraft Speeds

Science.gov (United States)

Kazil, J.; Feingold, G.; Balsells, J.; Klinger, C.

2017-12-01

Cloud top radiative cooling is a primary driver of turbulence in the stratocumulus-topped marine boundary. A functional relationship between cloud top cooling and cloud base updraft speeds may therefore exist. A correlation of cloud top radiative cooling and cloud base updraft speeds has been recently identified empirically, providing a basis for satellite retrieval of cloud base updraft speeds. Such retrievals may enable analysis of aerosol-cloud interactions using satellite observations: Updraft speeds at cloud base co-determine supersaturation and therefore the activation of cloud condensation nuclei, which in turn co-determine cloud properties and precipitation formation. We use large eddy simulation and an off-line radiative transfer model to explore the relationship between cloud-top radiative cooling and cloud base updraft speeds in a marine stratocumulus cloud over the course of the diurnal cycle. We find that during daytime, at low cloud water path (CWP correlated, in agreement with the reported empirical relationship. During the night, in the absence of short-wave heating, CWP builds up (CWP > 50 g m-2) and long-wave emissions from cloud top saturate, while cloud base heating increases. In combination, cloud top cooling and cloud base updrafts become weakly anti-correlated. A functional relationship between cloud top cooling and cloud base updraft speed can hence be expected for stratocumulus clouds with a sufficiently low CWP and sub-saturated long-wave emissions, in particular during daytime. At higher CWPs, in particular at night, the relationship breaks down due to saturation of long-wave emissions from cloud top.

Response of the dominant rodent species to close-to-nature logging practices in a temperate mixed forest

Directory of Open Access Journals (Sweden)

Peter Lešo

2016-12-01

Full Text Available The paper aims to answer the question whether differences exist in microhabitat preferences of the yellow-necked mouse and the bank vole between the natural forest and close-to-nature managed forest in the phase of stand regeneration. The two species were live-trapped during two periods in 2006 and 2007 on a square trapping grid established in a managed forest and a natural one. Ten microhabitat variables of each trapping point were measured to analyse their influence on the spatial distribution of the two species. At trapping points, the number of capture records for each species as a dependent variable was modelled using Generalised Linear Models. The herbal cover and a distance to the nearest woody debris were the most important measured microhabitat variables which affect the spatial distribution of both species. In the natural forest, the number of captures in both species increased significantly (p < 0.05 with a decreasing number of trees, increasing undergrowth coverage and decreasing distance to the nearest woody debris. In the managed forest, an increasing distance to the nearest tree and increasing herbal cover had a negative effect on the yellow-necked mouse occurrence (p < 0.001, while in contrast, the increase in values of the same variables increased frequency of occurrence of the bank vole (p < 0.001. Moreover, the bank vole was more frequent in the presence of woody debris (p < 0.002. The study demonstrated clearly that these species modify their spatial activity depending on the management of the woodland.

Cloud networking understanding cloud-based data center networks

CERN Document Server

Lee, Gary

2014-01-01

Cloud Networking: Understanding Cloud-Based Data Center Networks explains the evolution of established networking technologies into distributed, cloud-based networks. Starting with an overview of cloud technologies, the book explains how cloud data center networks leverage distributed systems for network virtualization, storage networking, and software-defined networking. The author offers insider perspective to key components that make a cloud network possible such as switch fabric technology and data center networking standards. The final chapters look ahead to developments in architectures

Morphology and ecology of sibon snakes (Squamata: Dipsadidae) from two forests in Central America

OpenAIRE

Todd R. Lewis; Rowland K. Griffin; Paul B. C. Grant; Alex Figueroa; Julie M. Ray; Kirsty E. Graham; Gabriel David

2013-01-01

Physical measurements, abundance, and ecological observations were recorded for Sibon annulatus,S. argus, S. longifrens, and S. nebulatus at two Neotropical habitats: a lowland swamp forest in Costa Rica and a montane cloud forest in Panama. Fourty-four and 58 adult snakes were recorded from Costa Rica and Panama, respectively. Differences in morphology and body condition showed minimal significant differences among species from both geographical locations. Observations of feeding, reproducti...

Determination of Characteristic Peroids of Suppression of Thermal Decomposition Reaction of Forest Fuel Material by Specialized Software

Directory of Open Access Journals (Sweden)

Gumerov Vladislav M.

2015-01-01

Full Text Available Experimental studies determining periods of suppression of thermal decomposition reaction of forest combustible materials was carried out by high-speed, cross-correlation cameras and panoramic techniques PIV and IPI under influence of water steam. Conditions and characteristics of reaction termination of thermal decomposition of forest combustible materials under reaction with steam cloud were defined.

Study of hantavirus infection in captive breed colonies of wild rodents

Directory of Open Access Journals (Sweden)

RC Oliveira

2004-10-01

Full Text Available Wild sigmondontine rodents are known to be the reservoir of several serotypes of New World hantaviruses. The mechanism of viral transmission is by aerosol inhalation of the excreta from infected rodents. Considering that the captive breed colonies of various wild mammals may present a potencial risk for hantaviral transmission, we examined 85 speciemens of Thrichomys spp. (Echimyidae and 17 speciemens of Nectomys squamipes (Sigmodontinae from our colony for the presence of hantavirus infections. Blood samples were assayed for the presence of antibodies to Andes nucleocapsid antigen using enzyme-linked immunosorbent assay (ELISA. Additionally, serum samples from workers previously exposed to wild rodents, in the laboratories where the study was conducted, were also tested by ELISA to investigate prevalence of anti-hantavirus IgG antibodies. All blood samples were negative for hantavirus antibodies. Although these results suggest that those rodent's colonies are hantavirus free, the work emphasizes the need for hantavirus serological monitoring in wild colonized rodents and secure handling potentially infected rodents as important biosafety measures.

Fog reduces transpiration in tree species of the Canarian relict heath-laurel cloud forest (Garajonay National Park, Spain).

Science.gov (United States)

Ritter, Axel; Regalado, Carlos M; Aschan, Guido

2009-04-01

The ecophysiologic role of fog in the evergreen heath-laurel 'laurisilva' cloud forests of the Canary Islands has not been unequivocally demonstrated, although it is generally assumed that fog water is important for the survival and the distribution of this relict paleoecosystem of the North Atlantic Macaronesian archipelagos. To determine the role of fog in this ecosystem, we combined direct transpiration measurements of heath-laurel tree species, obtained with Granier's heat dissipation probes, with micrometeorological and artificial fog collection measurements carried out in a 43.7-ha watershed located in the Garajonay National Park (La Gomera, Canary Islands, Spain) over a 10-month period. Median ambient temperature spanned from 7 to 15 degrees C under foggy conditions whereas higher values, ranging from 9 to 21 degrees C, were registered during fog-free periods. Additionally, during the periods when fog water was collected, global solar radiation values were linearly related (r2=0.831) to those under fog-free conditions, such that there was a 75+/-1% reduction in median radiation in response to fog. Fog events greatly reduced median diurnal tree transpiration, with rates about 30 times lower than that during fog-free conditions and approximating the nighttime rates in both species studied (the needle-like leaf Erica arborea L. and the broadleaf Myrica faya Ait.). This large decrease in transpiration in response to fog was independent of the time of the day, tree size and species and micrometeorological status, both when expressed on a median basis and in cumulative terms for the entire 10-month measuring period. We conclude that, in contrast to the turbulent deposition of fog water droplets on the heath-laurel species, which may be regarded as a localized hydrological phenomenon that is important for high-altitude wind-exposed E. arborea trees, the cooler, wetter and shaded microenvironment provided by the cloud immersion belt represents a large-scale effect

Quantifying Boreal Forest Structure and Composition Using UAV Structure from Motion

Directory of Open Access Journals (Sweden)

Michael Alonzo

2018-03-01

Full Text Available The vast extent and inaccessibility of boreal forest ecosystems are barriers to routine monitoring of forest structure and composition. In this research, we bridge the scale gap between intensive but sparse plot measurements and extensive remote sensing studies by collecting forest inventory variables at the plot scale using an unmanned aerial vehicle (UAV and a structure from motion (SfM approach. At 20 Forest Inventory and Analysis (FIA subplots in interior Alaska, we acquired overlapping imagery and generated dense, 3D, RGB (red, green, blue point clouds. We used these data to model forest type at the individual crown scale as well as subplot-scale tree density (TD, basal area (BA, and aboveground biomass (AGB. We achieved 85% cross-validation accuracy for five species at the crown level. Classification accuracy was maximized using three variables representing crown height, form, and color. Consistent with previous UAV-based studies, SfM point cloud data generated robust models of TD (r2 = 0.91, BA (r2 = 0.79, and AGB (r2 = 0.92, using a mix of plot- and crown-scale information. Precise estimation of TD required either segment counts or species information to differentiate black spruce from mixed white spruce plots. The accuracy of species-specific estimates of TD, BA, and AGB at the plot scale was somewhat variable, ranging from accurate estimates of black spruce TD (+/−1% and aspen BA (−2% to misallocation of aspen AGB (+118% and white spruce AGB (−50%. These results convey the potential utility of SfM data for forest type discrimination in FIA plots and the remaining challenges to develop classification approaches for species-specific estimates at the plot scale that are more robust to segmentation error.

The role of rodents in avian influenza outbreaks in poultry farms: a review.

Science.gov (United States)

Velkers, Francisca C; Blokhuis, Simon J; Veldhuis Kroeze, Edwin J B; Burt, Sara A

2017-12-01

Wild migratory birds are associated with global avian influenza virus (AIV) spread. Although direct contact with wild birds and contaminated fomites is unlikely in modern non-free range poultry farms applying biosecurity measures, AIV outbreaks still occur. This suggests involvement of other intermediate factors for virus transmission between wild birds and poultry. This review describes current evidence of the potential role of rodents in AIV transmission from wild birds to poultry and between poultry houses. Rodents can be abundant around poultry houses, share their habitat with waterfowl and can readily enter poultry houses. Survival of AIV from waterfowl in poultry house surroundings and on the coat of rodents suggests that rodents are likely to act as mechanical vector. AIVs can replicate in rodents without adaptation, resulting in high viral titres in lungs and nasal turbinates, virus presence in nasal washes and saliva, and transmission to naïve contact animals. Therefore, active AIV shedding by infected rodents may play a role in transmission to poultry. Further field and experimental studies are needed to provide evidence for a role of rodents in AIV epidemiology. Making poultry houses rodent-proof and the immediate surroundings unattractive for rodents are recommended as preventive measures against possible AIV introduction.

Formation of giant molecular clouds in global spiral structures: the role of orbital dynamics and cloud-cloud collisions

International Nuclear Information System (INIS)

Roberts, W.W. Jr.; Stewart, G.R.

1987-01-01

The different roles played by orbital dynamics and dissipative cloud-cloud collisions in the formation of giant molecular clouds (GMCs) in a global spiral structure are investigated. The interstellar medium (ISM) is simulated by a system of particles, representing clouds, which orbit in a spiral-perturbed, galactic gravitational field. The overall magnitude and width of the global cloud density distribution in spiral arms is very similar in the collisional and collisionless simulations. The results suggest that the assumed number density and size distribution of clouds and the details of individual cloud-cloud collisions have relatively little effect on these features. Dissipative cloud-cloud collisions play an important steadying role for the cloud system's global spiral structure. Dissipative cloud-cloud collisions also damp the relative velocity dispersion of clouds in massive associations and thereby aid in the effective assembling of GMC-like complexes

Evaluation of Passive Multilayer Cloud Detection Using Preliminary CloudSat and CALIPSO Cloud Profiles

Science.gov (United States)

Minnis, P.; Sun-Mack, S.; Chang, F.; Huang, J.; Nguyen, L.; Ayers, J. K.; Spangenberg, D. A.; Yi, Y.; Trepte, C. R.

2006-12-01

During the last few years, several algorithms have been developed to detect and retrieve multilayered clouds using passive satellite data. Assessing these techniques has been difficult due to the need for active sensors such as cloud radars and lidars that can "see" through different layers of clouds. Such sensors have been available only at a few surface sites and on aircraft during field programs. With the launch of the CALIPSO and CloudSat satellites on April 28, 2006, it is now possible to observe multilayered systems all over the globe using collocated cloud radar and lidar data. As part of the A- Train, these new active sensors are also matched in time ad space with passive measurements from the Aqua Moderate Resolution Imaging Spectroradiometer (MODIS) and Advanced Microwave Scanning Radiometer - EOS (AMSR-E). The Clouds and the Earth's Radiant Energy System (CERES) has been developing and testing algorithms to detect ice-over-water overlapping cloud systems and to retrieve the cloud liquid path (LWP) and ice water path (IWP) for those systems. One technique uses a combination of the CERES cloud retrieval algorithm applied to MODIS data and a microwave retrieval method applied to AMSR-E data. The combination of a CO2-slicing cloud retireval technique with the CERES algorithms applied to MODIS data (Chang et al., 2005) is used to detect and analyze such overlapped systems that contain thin ice clouds. A third technique uses brightness temperature differences and the CERES algorithms to detect similar overlapped methods. This paper uses preliminary CloudSat and CALIPSO data to begin a global scale assessment of these different methods. The long-term goals are to assess and refine the algorithms to aid the development of an optimal combination of the techniques to better monitor ice 9and liquid water clouds in overlapped conditions.

Diseño de un plan de marketing de servicios para Bio Hostal Mindo Cloud Forest ubicado en la parroquia rural de Mindo-contón San Miguel de los Bancos.

OpenAIRE

Gordillo Barreno, Diana Stephania

2012-01-01

La Hostería Mindo Cloud Forest es un establecimiento de alojamiento y recreación turístico ubicado en la parroquia de Mindo, con un promedio de vida de tres años, ha tenido un desarrollo limitado, con bajos niveles de ocupación que no han logrado ubicar a la empresa entre las empresas de infraestructura más representativas de la zona, este trabajo de investigación está orientado a proponer una plan de marketing que le permita a la Hostal mejorar su situación competitiva a través de una mayor ...

Cloud Computing Fundamentals

Science.gov (United States)

Furht, Borko

In the introductory chapter we define the concept of cloud computing and cloud services, and we introduce layers and types of cloud computing. We discuss the differences between cloud computing and cloud services. New technologies that enabled cloud computing are presented next. We also discuss cloud computing features, standards, and security issues. We introduce the key cloud computing platforms, their vendors, and their offerings. We discuss cloud computing challenges and the future of cloud computing.

77 FR 53839 - Shasta-Trinity National Forest; California; East McCloud Plantations Thinning Project

Science.gov (United States)

2012-09-04

... actions include road maintenance and reconstruction of National Forest System, new road construction and... maintenance and 36 miles of reconstruction on National Forest System (NFS) roads. Existing unauthorized routes... be rehabilitated when no longer needed for this project. Maintenance Level 1 (intermittent use) roads...

Satellite remote sensing of aerosol and cloud properties over Eurasia

Science.gov (United States)

Sogacheva, Larisa; Kolmonen, Pekka; Saponaro, Giulia; Virtanen, Timo; Rodriguez, Edith; Sundström, Anu-Maija; Atlaskina, Ksenia; de Leeuw, Gerrit

2015-04-01

Satellite remote sensing provides the spatial distribution of aerosol and cloud properties over a wide area. In our studies large data sets are used for statistical studies on aerosol and cloud interaction in an area over Fennoscandia, the Baltic Sea and adjacent regions over the European mainland. This area spans several regimes with different influences on aerosol cloud interaction such as a the transition from relative clean air over Fennoscandia to more anthropogenically polluted air further south, and the influence maritime air over the Baltic and oceanic air advected from the North Atlantic. Anthropogenic pollution occurs in several parts of the study area, and in particular near densely populated areas and megacities, but also in industrialized areas and areas with dense traffic. The aerosol in such areas is quite different from that produced over the boreal forest and has different effects on air quality and climate. Studies have been made on the effects of aerosols on air quality and on the radiation balance in China. The aim of the study is to study the effect of these different regimes on aerosol-cloud interaction using a large aerosol and cloud data set retrieved with the (Advanced) Along Track Scanning Radiometer (A)ATSR Dual View algorithm (ADV) further developed at Finnish Meteorological Institute and aerosol and cloud data provided by MODIS. Retrieval algorithms for aerosol and clouds have been developed for the (A)ATSR, consisting of a series of instruments of which we use the second and third one: ATSR-2 which flew on the ERS-2 satellite (1995-2003) and AATSR which flew on the ENVISAT satellite (2002-2012) (both from the European Space Agency, ESA). The ADV algorithm provides aerosol data on a global scale with a default resolution of 10x10km2 (L2) and an aggregate product on 1x1 degree (L3). Optional, a 1x1 km2 retrieval products is available over smaller areas for specific studies. Since for the retrieval of AOD no prior knowledge is needed on

Towards sustainable management of rodents in organic animal husbandry

NARCIS (Netherlands)

Meerburg, B.G.; Bonde, M.; Brom, F.W.A.; Endepols, S.; Jensen, A.N.; Leirs, H.; Lodal, J.; Singleton, G.R.; Pelz, H.J.; Rodenburg, T.B.; Kijlstra, A.

2004-01-01

From 26 to 28 May 2004 an international seminar was held in Wageningen, the Netherlands, about current knowledge and advice on rodent management on organic pig and poultry farms in Western Europe. This paper summarizes the discussions. Rodent management is necessary to protect the food production

Le rôle des rongeurs dans la dispersion des diaspores en milieu forestier (synthèse bibliographique

Directory of Open Access Journals (Sweden)

Evrard, Q.

2017-01-01

Full Text Available The role of rodents in the regeneration of forest ecosystems. A review. Introduction. Seed dispersal is a key interaction influencing a number of ecological processes that are important to the maintenance of diversity in forest ecosystems. Rodents, mainly considered as seed predators, can carry, hide and discard seeds, often transporting them over considerable distances from the parent tree and thus leading to an enhanced germination rate. The role of rodents in forest regeneration therefore depends upon several environmental variables influencing their behavior. Literature. Many publications demonstrate that rodents are mostly seed predators for many species. Nevertheless, because it is hard to define their pattern of movement, the role of rodents in forest regeneration could be underestimated. Through scatter-hoarding, rodents may play a crucial role, particularly in those forests where anthropogenic pressures have led to a reduction in the density of large mammals. However, very few studies have been conducted in African moist forests where defaunation can be high, and the role of rodents has been very poorly studied. Conclusions. To understand the phenomenon, we recommend the further investigation of the interactions between seeds and rodents by employing methods that have been commonly used on other continents.

[Forest lighting fire forecasting for Daxing'anling Mountains based on MAXENT model].

Science.gov (United States)

Sun, Yu; Shi, Ming-Chang; Peng, Huan; Zhu, Pei-Lin; Liu, Si-Lin; Wu, Shi-Lei; He, Cheng; Chen, Feng

2014-04-01

Daxing'anling Mountains is one of the areas with the highest occurrence of forest lighting fire in Heilongjiang Province, and developing a lightning fire forecast model to accurately predict the forest fires in this area is of importance. Based on the data of forest lightning fires and environment variables, the MAXENT model was used to predict the lightning fire in Daxing' anling region. Firstly, we studied the collinear diagnostic of each environment variable, evaluated the importance of the environmental variables using training gain and the Jackknife method, and then evaluated the prediction accuracy of the MAXENT model using the max Kappa value and the AUC value. The results showed that the variance inflation factor (VIF) values of lightning energy and neutralized charge were 5.012 and 6.230, respectively. They were collinear with the other variables, so the model could not be used for training. Daily rainfall, the number of cloud-to-ground lightning, and current intensity of cloud-to-ground lightning were the three most important factors affecting the lightning fires in the forest, while the daily average wind speed and the slope was of less importance. With the increase of the proportion of test data, the max Kappa and AUC values were increased. The max Kappa values were above 0.75 and the average value was 0.772, while all of the AUC values were above 0.5 and the average value was 0. 859. With a moderate level of prediction accuracy being achieved, the MAXENT model could be used to predict forest lightning fire in Daxing'anling Mountains.

Relationships among cloud occurrence frequency, overlap, and effective thickness derived from CALIPSO and CloudSat merged cloud vertical profiles

Science.gov (United States)

Kato, Seiji; Sun-Mack, Sunny; Miller, Walter F.; Rose, Fred G.; Chen, Yan; Minnis, Patrick; Wielicki, Bruce A.

2010-01-01

A cloud frequency of occurrence matrix is generated using merged cloud vertical profiles derived from the satellite-borne Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP) and cloud profiling radar. The matrix contains vertical profiles of cloud occurrence frequency as a function of the uppermost cloud top. It is shown that the cloud fraction and uppermost cloud top vertical profiles can be related by a cloud overlap matrix when the correlation length of cloud occurrence, which is interpreted as an effective cloud thickness, is introduced. The underlying assumption in establishing the above relation is that cloud overlap approaches random overlap with increasing distance separating cloud layers and that the probability of deviating from random overlap decreases exponentially with distance. One month of Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO) and CloudSat data (July 2006) support these assumptions, although the correlation length sometimes increases with separation distance when the cloud top height is large. The data also show that the correlation length depends on cloud top hight and the maximum occurs when the cloud top height is 8 to 10 km. The cloud correlation length is equivalent to the decorrelation distance introduced by Hogan and Illingworth (2000) when cloud fractions of both layers in a two-cloud layer system are the same. The simple relationships derived in this study can be used to estimate the top-of-atmosphere irradiance difference caused by cloud fraction, uppermost cloud top, and cloud thickness vertical profile differences.

Roles of Fog and Topography in Redwood Forest Hydrology

Science.gov (United States)

Francis, E. J.; Asner, G. P.

2017-12-01

Spatial variability of water in forests is a function of both climatic gradients that control water inputs and topo-edaphic variation that determines the flows of water belowground, as well as interactions of climate with topography. Coastal redwood forests are hydrologically unique because they are influenced by coastal low clouds, or fog, that is advected onto land by a strong coastal-to-inland temperature difference. Where fog intersects the land surface, annual water inputs from summer fog drip can be greater than that of winter rainfall. In this study, we take advantage of mapped spatial gradients in forest canopy water storage, topography, and fog cover in California to better understand the roles and interactions of fog and topography in the hydrology of redwood forests. We test a conceptual model of redwood forest hydrology with measurements of canopy water content derived from high-resolution airborne imaging spectroscopy, topographic variables derived from high-resolution LiDAR data, and fog cover maps derived from NASA MODIS data. Landscape-level results provide insight into hydrological processes within redwood forests, and cross-site analyses shed light on their generality.

Population dynamics of Rodents and Insectivores in lowland tropical ...

African Journals Online (AJOL)

The community structure of rodents and insectivores in the lowland tropical rainforest of Okomu National Park, Edo State, Nigeria was assessed using a combination of live-trapping and sighting techniques during the dry and wet seasons. Seventeen species (14 species of rodent, 3 species of insectivores) were captured, ...

Clustering, randomness, and regularity in cloud fields: 2. Cumulus cloud fields

Science.gov (United States)

Zhu, T.; Lee, J.; Weger, R. C.; Welch, R. M.

1992-12-01

During the last decade a major controversy has been brewing concerning the proper characterization of cumulus convection. The prevailing view has been that cumulus clouds form in clusters, in which cloud spacing is closer than that found for the overall cloud field and which maintains its identity over many cloud lifetimes. This "mutual protection hypothesis" of Randall and Huffman (1980) has been challenged by the "inhibition hypothesis" of Ramirez et al. (1990) which strongly suggests that the spatial distribution of cumuli must tend toward a regular distribution. A dilemma has resulted because observations have been reported to support both hypotheses. The present work reports a detailed analysis of cumulus cloud field spatial distributions based upon Landsat, Advanced Very High Resolution Radiometer, and Skylab data. Both nearest-neighbor and point-to-cloud cumulative distribution function statistics are investigated. The results show unequivocally that when both large and small clouds are included in the cloud field distribution, the cloud field always has a strong clustering signal. The strength of clustering is largest at cloud diameters of about 200-300 m, diminishing with increasing cloud diameter. In many cases, clusters of small clouds are found which are not closely associated with large clouds. As the small clouds are eliminated from consideration, the cloud field typically tends towards regularity. Thus it would appear that the "inhibition hypothesis" of Ramirez and Bras (1990) has been verified for the large clouds. However, these results are based upon the analysis of point processes. A more exact analysis also is made which takes into account the cloud size distributions. Since distinct clouds are by definition nonoverlapping, cloud size effects place a restriction upon the possible locations of clouds in the cloud field. The net effect of this analysis is that the large clouds appear to be randomly distributed, with only weak tendencies towards

Multiple infections of rodents with zoonotic pathogens in Austria.

Science.gov (United States)

Schmidt, Sabrina; Essbauer, Sandra S; Mayer-Scholl, Anne; Poppert, Sven; Schmidt-Chanasit, Jonas; Klempa, Boris; Henning, Klaus; Schares, Gereon; Groschup, Martin H; Spitzenberger, Friederike; Richter, Dania; Heckel, Gerald; Ulrich, Rainer G

2014-07-01

Rodents are important reservoirs for a large number of zoonotic pathogens. We examined the occurrence of 11 viral, bacterial, and parasitic agents in rodent populations in Austria, including three different hantaviruses, lymphocytic choriomeningitis virus, orthopox virus, Leptospira spp., Borrelia spp., Rickettsia spp., Bartonella spp., Coxiella burnetii, and Toxoplasma gondii. In 2008, 110 rodents of four species (40 Clethrionomys glareolus, 29 Apodemus flavicollis, 26 Apodemus sylvaticus, and 15 Microtus arvalis) were trapped at two rural sites in Lower Austria. Chest cavity fluid and samples of lung, spleen, kidney, liver, brain, and ear pinna skin were collected. We screened selected tissue samples for hantaviruses, lymphocytic choriomeningitis virus, orthopox viruses, Leptospira, Borrelia, Rickettsia, Bartonella spp., C. burnetii, and T. gondii by RT-PCR/PCR and detected nucleic acids of Tula hantavirus, Leptospira spp., Borrelia afzelii, Rickettsia spp., and different Bartonella species. Serological investigations were performed for hantaviruses, lymphocytic choriomeningitis virus, orthopox viruses, and Rickettsia spp. Here, Dobrava-Belgrade hantavirus-, Tula hantavirus-, lymphocytic choriomeningitis virus-, orthopox virus-, and rickettsia-specific antibodies were demonstrated. Puumala hantavirus, C. burnetii, and T. gondii were neither detected by RT-PCR/PCR nor by serological methods. In addition, multiple infections with up to three pathogens were shown in nine animals of three rodent species from different trapping sites. In conclusion, these results show that rodents in Austria may host multiple zoonotic pathogens. Our observation raises important questions regarding the interactions of different pathogens in the host, the countermeasures of the host's immune system, the impact of the host-pathogen interaction on the fitness of the host, and the spread of infectious agents among wild rodents and from those to other animals or humans.

Farmer survey in the hinterland of Kisangani (Democratic Republic of Congo) on rodent crop damage and rodent control techniques used

DEFF Research Database (Denmark)

Drazo, Nicaise Amundala; Kennis, Jan; Leirs, Herwig

2008-01-01

We conducted a survey on rodent crop damage among farmers in the hinterland of Kisangani (Democratic Republic of Congo). We studied the amount of crop damage, the rodent groups causing crop damage, the growth stages affected and the control techniques used. We conducted this survey in three...... municipalities using a standard questionnaire form translated into local languages, between November 2005 and June 2006 and during July 2007. We used the Quotas method and interviewed 70 households per municipality. Farmers indicated rodent groups implicated in crop damage on color photographs. Two types...... of survey techniques were used: individual and focus-group surveys. The sugar cane rat, Thryonomys sp. and Lemniscomys striatus caused most damage to crops, but inside granaries, Rattus rattus was the primary pest species eating stored food supplies and causing damage to stored goods. Cassava and maize were...

MR microscopy of the lung in small rodents

International Nuclear Information System (INIS)

Takahashi, Masaya; Kubo, Shigeto; Kiryu, Shigeru; Gee, James; Hatabu, Hiroto

2007-01-01

Understanding how the mammalian respiratory system works and how it changes in disease states and under the influence of drugs is frequently pursued in model systems such as small rodents. These have many advantages, including being easily obtained in large numbers as purebred strains. Studies in small rodents are valuable for proof of concept studies and for increasing our knowledge about disease mechanisms. Since the recent developments in the generation of genetically designed animal models of disease, one needs the ability to assess morphology and function in in vivo systems. In this article, we first review previous reports regarding thoracic imaging. We then discuss approaches to take in making use of small rodents to increase MR microscopic sensitivity for these studies and to establish MR methods for clinically relevant lung imaging

Ecology of rodents at an old quarry in Zambia

African Journals Online (AJOL)

Ecology of rodents at an old quarry in Zambia. E.N. Chidumayo. Livingstone Museum, Zambia. An old quarry, 2,5 hain size near Livingstone in southern. Zambia was kill- and live-trapped between September 1974 and December 1976 to determine ecological relations among. rodent species inhabiting it. Seven species ...

Sleep in the Cape Mole Rat: A Short-Sleeping Subterranean Rodent.

Science.gov (United States)

Kruger, Jean-Leigh; Gravett, Nadine; Bhagwandin, Adhil; Bennett, Nigel C; Archer, Elizabeth K; Manger, Paul R

2016-01-01

The Cape mole rat Georychus capensis is a solitary subterranean rodent found in the western and southern Cape of South Africa. This approximately 200-gram bathyergid rodent shows a nocturnal circadian rhythm, but sleep in this species is yet to be investigated. Using telemetric recordings of the electroencephalogram (EEG) and electromyogram (EMG) in conjunction with video recordings, we were able to show that the Cape mole rat, like all other rodents, has sleep periods composed of both rapid eye movement (REM) and slow-wave (non-REM) sleep. These mole rats spent on average 15.4 h awake, 7.1 h in non-REM sleep and 1.5 h in REM sleep each day. Cape mole rats sleep substantially less than other similarly sized terrestrial rodents but have a similar percentage of total sleep time occupied by REM sleep. In addition, the duration of both non-REM and REM sleep episodes was markedly shorter in the Cape mole rat than has been observed in terrestrial rodents. Interestingly, these features (total sleep time and episode duration) are similar to those observed in another subterranean bathyergid mole rat, i.e. Fukomys mechowii. Thus, there appears to be a bathyergid type of sleep amongst the rodents that may be related to their environment and the effect of this on their circadian rhythm. Investigating further species of bathyergid mole rats may fully define the emerging picture of sleep in these subterranean African rodents. © 2016 S. Karger AG, Basel.

Cloud occurrences and cloud radiative effects (CREs) from CERES-CALIPSO-CloudSat-MODIS (CCCM) and CloudSat radar-lidar (RL) products

Science.gov (United States)

Ham, Seung-Hee; Kato, Seiji; Rose, Fred G.; Winker, David; L'Ecuyer, Tristan; Mace, Gerald G.; Painemal, David; Sun-Mack, Sunny; Chen, Yan; Miller, Walter F.

2017-08-01

Two kinds of cloud products obtained from Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO), CloudSat, and Moderate Resolution Imaging Spectroradiometer (MODIS) are compared and analyzed in this study: Clouds and the Earth's Radiant Energy System (CERES)-CALIPSO-CloudSat-MODIS (CCCM) product and CloudSat radar-lidar products such as GEOPROF-LIDAR and FLXHR-LIDAR. Compared to GEOPROF-LIDAR, low-level (40°). The difference occurs when hydrometeors are detected by CALIPSO lidar but are undetected by CloudSat radar. In the comparison of cloud radiative effects (CREs), global mean differences between CCCM and FLXHR-LIDAR are mostly smaller than 5 W m-2, while noticeable regional differences are found. For example, CCCM shortwave (SW) and longwave (LW) CREs are larger than FXLHR-LIDAR along the west coasts of Africa and America because the GEOPROF-LIDAR algorithm misses shallow marine boundary layer clouds. In addition, FLXHR-LIDAR SW CREs are larger than the CCCM counterpart over tropical oceans away from the west coasts of America. Over midlatitude storm-track regions, CCCM SW and LW CREs are larger than the FLXHR-LIDAR counterpart.

Natural Intestinal Protozoa in Rodents (Rodentia: Gerbillinae, Murinae, Cricetinae in Northwestern Iran

Directory of Open Access Journals (Sweden)

Mehdi MOHEBALI

2017-09-01

Full Text Available Background: Majority of parasitic infections in rodents have zoonotic importance. This study aimed to determine the frequency and intensity of intestinal protozoa infections of rodents including Meriones persicus, Mus musculus and, Cricetulus migratorius.Methods: This survey was conducted in Meshkin Shahr district in northwestern Iran from Mar. to Dec. of 2014. Intestinal samples of 204 rodents including M. persicus (n=117, M. musculus (n=63 and C. migratorius (n=24 were parasitologically examined. Formalin-ether concentration method was done for all of rodents stool samples and observed with light microscope. All of suspected cases were stained with trichorome staining Method. Cultivation in dichromate potassium 2.5% was carried out for all of coccidian positive samples. Acid fast and aniline blue staining methods were used for detecting of coccidian oocysts and intestinal microsporidial spores, respectively.Results: About 121(59.3% of the caught rodents were generally infected with intestinal protozoa. Entamoeba muris 14(6.9%, Trichomonas muris 55(27.0%, Chilomastix betencourtti 17 (8.3%, Giardia muris 19(9.3%, Eimeria spp. 46(22.5%, Isospora spp. 4(2% and Cryptosporidium spp. 1(0.5% were found from the collected rodents. Microsporidian spores were identified in 63 (31% out of the 204 collected rodents using aniline blue staining method.Conclusion: Since some of the infections are zoonotic importance thus, control of rodents can be decreased new cases of the parasitic zoonoses in humans.

Natural Intestinal Protozoa in Rodents (Rodentia: Gerbillinae, Murinae, Cricetinae) in Northwestern Iran

Science.gov (United States)

MOHEBALI, Mehdi; ZAREI, Zabiholah; Khanaliha, Khadijeh; KIA, Eshrat Beigom; MOTAVALLI-HAGHI, Afsaneh; DAVOODI, Jaber; REZAEIAN, Tahereh; TARIGHI, Fathemeh; REZAEIAN, Mostafa

2017-01-01

Background: Majority of parasitic infections in rodents have zoonotic importance. This study aimed to determine the frequency and intensity of intestinal protozoa infections of rodents including Meriones persicus, Mus musculus and, Cricetulus migratorius. Methods: This survey was conducted in Meshkin Shahr district in northwestern Iran from Mar. to Dec. of 2014. Intestinal samples of 204 rodents including M. persicus (n=117), M. musculus (n=63) and C. migratorius (n=24) were parasitologically examined. Formalin-ether concentration method was done for all of rodents stool samples and observed with light microscope. All of suspected cases were stained with trichorome staining Method. Cultivation in dichromate potassium 2.5% was carried out for all of coccidian positive samples. Acid fast and aniline blue staining methods were used for detecting of coccidian oocysts and intestinal microsporidial spores, respectively. Results: About 121(59.3%) of the caught rodents were generally infected with intestinal protozoa. Entamoeba muris 14(6.9%), Trichomonas muris 55(27.0%), Chilomastix betencourtti 17 (8.3%), Giardia muris 19(9.3%), Eimeria spp. 46(22.5%), Isospora spp. 4(2%) and Cryptosporidium spp. 1(0.5%) were found from the collected rodents. Microsporidian spores were identified in 63 (31%) out of the 204 collected rodents using aniline blue staining method. Conclusion: Since some of the infections are zoonotic importance thus, control of rodents can be decreased new cases of the parasitic zoonoses in humans. PMID:28979348

Optical Cloud Pixel Recovery via Machine Learning

Directory of Open Access Journals (Sweden)

Subrina Tahsin

2017-05-01

Full Text Available Remote sensing derived Normalized Difference Vegetation Index (NDVI is a widely used index to monitor vegetation and land use change. NDVI can be retrieved from publicly available data repositories of optical sensors such as Landsat, Moderate Resolution Imaging Spectro-radiometer (MODIS and several commercial satellites. Studies that are heavily dependent on optical sensors are subject to data loss due to cloud coverage. Specifically, cloud contamination is a hindrance to long-term environmental assessment when using information from satellite imagery retrieved from visible and infrared spectral ranges. Landsat has an ongoing high-resolution NDVI record starting from 1984. Unfortunately, this long time series NDVI data suffers from the cloud contamination issue. Though both simple and complex computational methods for data interpolation have been applied to recover cloudy data, all the techniques have limitations. In this paper, a novel Optical Cloud Pixel Recovery (OCPR method is proposed to repair cloudy pixels from the time-space-spectrum continuum using a Random Forest (RF trained and tested with multi-parameter hydrologic data. The RF-based OCPR model is compared with a linear regression model to demonstrate the capability of OCPR. A case study in Apalachicola Bay is presented to evaluate the performance of OCPR to repair cloudy NDVI reflectance. The RF-based OCPR method achieves a root mean squared error of 0.016 between predicted and observed NDVI reflectance values. The linear regression model achieves a root mean squared error of 0.126. Our findings suggest that the RF-based OCPR method is effective to repair cloudy pixels and provides continuous and quantitatively reliable imagery for long-term environmental analysis.

Relation of Cloud Occurrence Frequency, Overlap, and Effective Thickness Derived from CALIPSO and CloudSat Merged Cloud Vertical Profiles

Science.gov (United States)

Kato, Seiji; Sun-Mack, Sunny; Miller, Walter F.; Rose, Fred G.; Chen, Yan; Minnis, Patrick; Wielicki, Bruce A.

2009-01-01

A cloud frequency of occurrence matrix is generated using merged cloud vertical profile derived from Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP) and Cloud Profiling Radar (CPR). The matrix contains vertical profiles of cloud occurrence frequency as a function of the uppermost cloud top. It is shown that the cloud fraction and uppermost cloud top vertical pro les can be related by a set of equations when the correlation distance of cloud occurrence, which is interpreted as an effective cloud thickness, is introduced. The underlying assumption in establishing the above relation is that cloud overlap approaches the random overlap with increasing distance separating cloud layers and that the probability of deviating from the random overlap decreases exponentially with distance. One month of CALIPSO and CloudSat data support these assumptions. However, the correlation distance sometimes becomes large, which might be an indication of precipitation. The cloud correlation distance is equivalent to the de-correlation distance introduced by Hogan and Illingworth [2000] when cloud fractions of both layers in a two-cloud layer system are the same.

Early Eocene rodents (Mammalia) from the Subathu Formation of ...

Indian Academy of Sciences (India)

1997a, b). Most of the rodents from this stratigraphic level have been referred to a rather diverse family Cha- pattimyidae ... Herein we describe a new early Eocene rodent assemblage .... thick zone of brownish red shales that occur as a ..... 1997b;. Plate 3, figure 31). ...... northwestern Pakistan and remarks on the collision.

Research Note. Occurrence of gastrointestinal helminths in commensal rodents from Tabasco, Mexico

Directory of Open Access Journals (Sweden)

Cigarroa-Toledo N.

2017-06-01

Full Text Available The aim of this study was to determine the prevalence and species composition of helminths in commensal rodents captured inside private residences in the city of Villahermosa in Tabasco, Mexico. Trapping was performed at each house for three consecutive nights from October to December 2015. Fifty commensal rodents were captured: 23 Rattus norvegicus, 16 Mus musculus and 11 Rattus rattus. Rodents were transported alive to the laboratory and held in cages until they defecated. Feces were analyzed for helminth eggs using the Sheather’s flotation technique. The overall prevalence of helminths in rodents was 60 %: R. norvegicus was more likely to be parasitized (87.0 % than R. rattus (63.6 % and M. musculus (18.8 %. Eggs from at least 13 species of helminths were identified: Hymenolepis diminuta, Rodentolepis nana, Moniliformis moniliformis, Heligmosomoides polygyrus, Heterakis spumosa, Mastophorus muris, Nippostrongylus brasiliensis, Strongyloides ratti, Syphacia obvelata, Syphacia muris, Toxocara sp., Trichosomoides crassicauda, and Trichuris muris. This is the first study to report the presence of H. polygyrus, S. ratti and T. crassicauda in commensal rodents in Mexico. In conclusion, our results suggest that helminths commonly infect commensal rodents in Villahermosa and therefore rodents present a health risk to inhabitants in this region.

Contrasting Cloud Composition Between Coupled and Decoupled Marine Boundary Layer Clouds

Science.gov (United States)

WANG, Z.; Mora, M.; Dadashazar, H.; MacDonald, A.; Crosbie, E.; Bates, K. H.; Coggon, M. M.; Craven, J. S.; Xian, P.; Campbell, J. R.; AzadiAghdam, M.; Woods, R. K.; Jonsson, H.; Flagan, R. C.; Seinfeld, J.; Sorooshian, A.

2016-12-01

Marine stratocumulus clouds often become decoupled from the vertical layer immediately above the ocean surface. This study contrasts cloud chemical composition between coupled and decoupled marine stratocumulus clouds. Cloud water and droplet residual particle composition were measured in clouds off the California coast during three airborne experiments in July-August of separate years (E-PEACE 2011, NiCE 2013, BOAS 2015). Decoupled clouds exhibited significantly lower overall mass concentrations in both cloud water and droplet residual particles, consistent with reduced cloud droplet number concentration and sub-cloud aerosol (Dp > 100 nm) number concentration, owing to detachment from surface sources. Non-refractory sub-micrometer aerosol measurements show that coupled clouds exhibit higher sulfate mass fractions in droplet residual particles, owing to more abundant precursor emissions from the ocean and ships. Consequently, decoupled clouds exhibited higher mass fractions of organics, nitrate, and ammonium in droplet residual particles, owing to effects of long-range transport from more distant sources. Total cloud water mass concentration in coupled clouds was dominated by sodium and chloride, and their mass fractions and concentrations exceeded those in decoupled clouds. Conversely, with the exception of sea salt constituents (e.g., Cl, Na, Mg, K), cloud water mass fractions of all species examined were higher in decoupled clouds relative to coupled clouds. These results suggest that an important variable is the extent to which clouds are coupled to the surface layer when interpreting microphysical data relevant to clouds and aerosol particles.

Hypericum perforatum as a cognitive enhancer in rodents: A meta-analysis

Science.gov (United States)

Ben-Eliezer, Daniel; Yechiam, Eldad

2016-01-01

Considered an antidepressant and anti-anxiety agent, Hypericum perforatum affects multiple neurotransmitters in a non-competitive synergistic manner, and may have nootropic potential. We quantitatively reviewed the pre-clinical literature to examine if there is a cognitive-enhancing effect of H. perforatum in healthy rodents. Additionally, within these studies, we compared the effects observed in intact rodents versus those whose performance has been impaired, mostly through stress manipulations. The meta-analysis incorporated studies that examined the effect of H. perforatum versus placebo on memory indices of task performance. All analyses were based on weighting different studies according to their inverse variance. Thirteen independent studies (published 2000–2014) involving 20 experimental comparisons met our inclusion criteria. The results showed a large positive effect of H. perforatum on cognitive performance for intact, healthy rodents (d = 1.11), though a larger effect emerged for stress-impaired rodents (d = 3.10 for restraint stress). The positive effect on intact rodents was observed in tasks assessing reference memory as well as working memory, and was not moderated by the type of memory or motivation (appetitive versus aversive). Thus, while primarily considered as a medication for depression, H. perforatum shows considerable nootropic potential in rodents. PMID:27762349

Neurogenic inflammation in human and rodent skin

DEFF Research Database (Denmark)

Schmelz, M; Petersen, Lars Jelstrup

2001-01-01

The combination of vasodilation and protein extravasation following activation of nociceptors has been termed "neurogenic inflammation." In contrast to rodents, no neurogenic protein extravasation can be elicited in healthy human skin. Dermal microdialysis has considerably increased our knowledge...... about neurogenic inflammation in human skin, including the involvement of mast cells.......The combination of vasodilation and protein extravasation following activation of nociceptors has been termed "neurogenic inflammation." In contrast to rodents, no neurogenic protein extravasation can be elicited in healthy human skin. Dermal microdialysis has considerably increased our knowledge...

Public Health Implications of Changing Rodent Importation Patterns - United States, 1999-2013.

Science.gov (United States)

Lankau, E W; Sinclair, J R; Schroeder, B A; Galland, G G; Marano, N

2017-04-01

The United States imports a large volume of live wild and domestic animal species; these animals pose a demonstrated risk for introduction of zoonotic diseases. Rodents are imported for multiple purposes, including scientific research, zoo exhibits and the pet trade. Current U.S. public health regulatory restrictions specific to rodent importation pertain only to those of African origin. To understand the impacts of these regulations and the potential public health risks of international rodent trade to the United States, we evaluated live rodent import records during 1999-2013 by shipment volume and geographic origin, source (e.g. wild-caught versus captive- or commercially bred), intended purpose and rodent taxonomy. Live rodent imports increased from 2737 animals during 1999 to 173 761 animals during 2013. Increases in both the number and size of shipments contributed to this trend. The proportion of wild-captured imports declined from 75% during 1999 to guinea pigs and hamsters arriving from other countries in North America were predominant taxa underlying this trend. After 2003, African-origin imports became sporadic events under the federal permit process. These patterns suggest development of large-scale captive rodent breeding markets abroad for commercial sale in the United States. While the shift from wild-captured imports alleviates many conservation concerns and risks for novel disease emergence, such consolidated sourcing might elevate exposure risks for zoonotic diseases associated with high-density rodent breeding (e.g. lymphocytic choriomeningitis or salmonellosis). A responsive border health system must periodically re-evaluate importation regulations in conjunction with key stakeholders to ensure a balance between the economic benefits of rodent trade against the potential public health risks. Published 2015. This article is a U.S. Government work and is in the public domain in the USA.

Using Lidar and color infrared imagery to successfully measure stand characteristics on the William B. Bankhead National Forest, Alabama

Science.gov (United States)

Jeffrey Stephens; Luben Dimov; Callie Schweitzer; Wubishet Tadesse

2008-01-01

Light detection and ranging (Lidar) and color infrared imagery (CIR) were used to quantify forest structure and to distinguish deciduous from coniferous trees for selected stands on the William B. Bankhead National Forest in Alabama. Lidar bare ground and vegetation point clouds were used to determine tree heights and tree locations. Lidar accuracy was assessed by...

Context-aware distributed cloud computing using CloudScheduler

Science.gov (United States)

Seuster, R.; Leavett-Brown, CR; Casteels, K.; Driemel, C.; Paterson, M.; Ring, D.; Sobie, RJ; Taylor, RP; Weldon, J.

2017-10-01

The distributed cloud using the CloudScheduler VM provisioning service is one of the longest running systems for HEP workloads. It has run millions of jobs for ATLAS and Belle II over the past few years using private and commercial clouds around the world. Our goal is to scale the distributed cloud to the 10,000-core level, with the ability to run any type of application (low I/O, high I/O and high memory) on any cloud. To achieve this goal, we have been implementing changes that utilize context-aware computing designs that are currently employed in the mobile communication industry. Context-awareness makes use of real-time and archived data to respond to user or system requirements. In our distributed cloud, we have many opportunistic clouds with no local HEP services, software or storage repositories. A context-aware design significantly improves the reliability and performance of our system by locating the nearest location of the required services. We describe how we are collecting and managing contextual information from our workload management systems, the clouds, the virtual machines and our services. This information is used not only to monitor the system but also to carry out automated corrective actions. We are incrementally adding new alerting and response services to our distributed cloud. This will enable us to scale the number of clouds and virtual machines. Further, a context-aware design will enable us to run analysis or high I/O application on opportunistic clouds. We envisage an open-source HTTP data federation (for example, the DynaFed system at CERN) as a service that would provide us access to existing storage elements used by the HEP experiments.

The Revised Neurobehavioral Severity Scale (NSS-R) for Rodents.

Science.gov (United States)

Yarnell, Angela M; Barry, Erin S; Mountney, Andrea; Shear, Deborah; Tortella, Frank; Grunberg, Neil E

2016-04-08

Motor and sensory deficits are common following traumatic brain injury (TBI). Although rodent models provide valuable insight into the biological and functional outcomes of TBI, the success of translational research is critically dependent upon proper selection of sensitive, reliable, and reproducible assessments. Published literature includes various observational scales designed to evaluate post-injury functionality; however, the heterogeneity in TBI location, severity, and symptomology can complicate behavioral assessments. The importance of choosing behavioral outcomes that can be reliably and objectively quantified in an efficient manner is becoming increasingly important. The Revised Neurobehavioral Severity Scale (NSS-R) is a continuous series of specific, sensitive, and standardized observational tests that evaluate balance, motor coordination, and sensorimotor reflexes in rodents. The tasks follow a specific order designed to minimize interference: balance, landing, tail raise, dragging, righting reflex, ear reflex, eye reflex, sound reflex, tail pinch, and hindpaw pinch. The NSS-R has proven to be a reliable method differentiating brain-injured rodents from non-brain-injured rodents across many brain injury models. Copyright © 2016 John Wiley & Sons, Inc.

AceCloud: Molecular Dynamics Simulations in the Cloud.

Science.gov (United States)

Harvey, M J; De Fabritiis, G

2015-05-26

We present AceCloud, an on-demand service for molecular dynamics simulations. AceCloud is designed to facilitate the secure execution of large ensembles of simulations on an external cloud computing service (currently Amazon Web Services). The AceCloud client, integrated into the ACEMD molecular dynamics package, provides an easy-to-use interface that abstracts all aspects of interaction with the cloud services. This gives the user the experience that all simulations are running on their local machine, minimizing the learning curve typically associated with the transition to using high performance computing services.

VMware private cloud computing with vCloud director

CERN Document Server

Gallagher, Simon

2013-01-01

It's All About Delivering Service with vCloud Director Empowered by virtualization, companies are not just moving into the cloud, they're moving into private clouds for greater security, flexibility, and cost savings. However, this move involves more than just infrastructure. It also represents a different business model and a new way to provide services. In this detailed book, VMware vExpert Simon Gallagher makes sense of private cloud computing for IT administrators. From basic cloud theory and strategies for adoption to practical implementation, he covers all the issues. You'll lea

Small mammal populations of an agroecosystem in the Atlantic Forest domain, southeastern Brazil

Directory of Open Access Journals (Sweden)

PS. D’Andrea

Full Text Available This study reports 2 years of the population dynamics and reproduction of a small mammal community using the removal method. The study was conducted in a rural area of the Atlantic Forest, in Sumidouro, Rio de Janeiro State, Brazil. The population sizes, age structure and reproduction were studied for the four most common species in the study area. The overall diversity was 1.67 and ranged between 0.8 to 1.67. The species richness was 13 considering the whole study. The most abundant species were the rodents Nectomys squamipes (n = 133, Akodon cursor (n = 74, Oligoryzomys nigripes (n = 25 and the marsupials Didelphis aurita (n = 58 and Philander frenatus (n = 50. Seven other rodents were captured once: Necromys lasiurus, Akodon montensis, Sooretamys angouya, Oecomys catherine, Oxymycterus judex, Euryzygomatomys spinosus and Trinomys iheringi. There were higher peaks for diversity and species richness during the winter (dry months, probably due to higher food availability. The marsupials had a seasonal reproduction with highest population sizes at the end of the rainy seasons. Nectomys squamipes reproduced mostly during rainy periods. Akodon cursor reproduced predominantly in the winter with the highest population peaks occurring during this season. The analysis of the population dynamics of the rodent species indicated that no species behaved as an agricultural pest, probably due to the heterogeneous landscape of high rotativity of vegetable cultivation. Rodent populations were more susceptible to the removal procedure than marsupial ones.

Public Health and Rodents: A Game of Cat and Mouse

NARCIS (Netherlands)

Meerburg, B.G.

2015-01-01

Rodents are the most abundant order of living mammals, distributed on every continent except Antarctic and represent 43 % of all mammalian species. Beside causing food losses and infrastructural damage, rodents can harbour pathogens that may cause serious problems to human and animal health.

Gaussian Radial Basis Function for Efficient Computation of Forest Indirect Illumination

Science.gov (United States)

Abbas, Fayçal; Babahenini, Mohamed Chaouki

2018-06-01

Global illumination of natural scenes in real time like forests is one of the most complex problems to solve, because the multiple inter-reflections between the light and material of the objects composing the scene. The major problem that arises is the problem of visibility computation. In fact, the computing of visibility is carried out for all the set of leaves visible from the center of a given leaf, given the enormous number of leaves present in a tree, this computation performed for each leaf of the tree which also reduces performance. We describe a new approach that approximates visibility queries, which precede in two steps. The first step is to generate point cloud representing the foliage. We assume that the point cloud is composed of two classes (visible, not-visible) non-linearly separable. The second step is to perform a point cloud classification by applying the Gaussian radial basis function, which measures the similarity in term of distance between each leaf and a landmark leaf. It allows approximating the visibility requests to extract the leaves that will be used to calculate the amount of indirect illumination exchanged between neighbor leaves. Our approach allows efficiently treat the light exchanges in the scene of a forest, it allows a fast computation and produces images of good visual quality, all this takes advantage of the immense power of computation of the GPU.

First Isolates of Leptospira spp., from Rodents Captured in Angola

Science.gov (United States)

Fortes-Gabriel, Elsa; Carreira, Teresa; Vieira, Maria Luísa

2016-01-01

Rodents play an important role in the transmission of pathogenic Leptospira spp. However, in Angola, neither the natural reservoirs of these spirochetes nor leptospirosis diagnosis has been considered. Regarding this gap, we captured rodents in Luanda and Huambo provinces to identify circulating Leptospira spp. Rodent kidney tissue was cultured and DNA amplified and sequenced. Culture isolates were evaluated for pathogenic status and typing with rabbit antisera; polymerase chain reaction (PCR) and sequencing were also performed. A total of 37 rodents were captured: Rattus rattus (15, 40.5%), Rattus norvegicus (9, 24.3%), and Mus musculus (13, 35.2%). Leptospiral DNA was amplified in eight (21.6%) kidney samples. From the cultures, we obtained four (10.8%) Leptospira isolates belonging to the Icterohaemorrhagiae and Ballum serogroups of Leptospira interrogans and Leptospira borgpetersenii genospecies, respectively. This study provides information about circulating leptospires spread by rats and mice in Angola. PMID:26928840

Fusion of NASA Airborne Snow Observatory (ASO Lidar Time Series over Mountain Forest Landscapes

Directory of Open Access Journals (Sweden)

António Ferraz

2018-01-01

Full Text Available Mountain ecosystems are among the most fragile environments on Earth. The availability of timely updated information on forest 3D structure would improve our understanding of the dynamic and impact of recent disturbance and regeneration events including fire, insect damage, and drought. Airborne lidar is a critical tool for monitoring forest change at high resolution but it has been little used for this purpose due to the scarcity of long-term time-series of measurements over a common region. Here, we investigate the reliability of on-going, multi-year lidar observations from the NASA-JPL Airborne Snow Observatory (ASO to characterize forest 3D structure at a fine spatial scale. In this study, weekly ASO measurements collected at ~1 pt/m2, primarily acquired to quantify snow volume and dynamics, are coherently merged to produce high-resolution point clouds ( ~ 12 pt/m2 that better describe forest structure. The merging methodology addresses the spatial bias in multi-temporal data due to uncertainties in platform trajectory and motion by collecting tie objects from isolated tree crown apexes in the lidar data. The tie objects locations are assigned to the centroid of multi-temporal lidar points to fuse and optimize the location of multiple measurements without the need for ancillary data or GPS control points. We apply the methodology to ASO lidar acquisitions over the Tuolumne River Basin in the Sierra Nevada, California, during the 2014 snow monitoring campaign and provide assessment of the fidelity of the fused point clouds for forest mountain ecosystem studies. The availability of ASO measurements that currently span 2013–2017 enable annual forest monitoring of important vegetated ecosystems that currently face ecological threads of great significance such as the Sierra Nevada (California and Olympic National Forest (Washington.

Retrieval of Aerosol Optical Depth Above Clouds from OMI Observations: Sensitivity Analysis, Case Studies

Science.gov (United States)

Torres, O.; Jethva, H.; Bhartia, P. K.

2012-01-01

A large fraction of the atmospheric aerosol load reaching the free troposphere is frequently located above low clouds. Most commonly observed aerosols above clouds are carbonaceous particles generally associated with biomass burning and boreal forest fires, and mineral aerosols originated in arid and semi-arid regions and transported across large distances, often above clouds. Because these aerosols absorb solar radiation, their role in the radiative transfer balance of the earth atmosphere system is especially important. The generally negative (cooling) top of the atmosphere direct effect of absorbing aerosols, may turn into warming when the light-absorbing particles are located above clouds. The actual effect depends on the aerosol load and the single scattering albedo, and on the geometric cloud fraction. In spite of its potential significance, the role of aerosols above clouds is not adequately accounted for in the assessment of aerosol radiative forcing effects due to the lack of measurements. In this paper we discuss the basis of a simple technique that uses near-UV observations to simultaneously derive the optical depth of both the aerosol layer and the underlying cloud for overcast conditions. The two-parameter retrieval method described here makes use of the UV aerosol index and reflectance measurements at 388 nm. A detailed sensitivity analysis indicates that the measured radiances depend mainly on the aerosol absorption exponent and aerosol-cloud separation. The technique was applied to above-cloud aerosol events over the Southern Atlantic Ocean yielding realistic results as indicated by indirect evaluation methods. An error analysis indicates that for typical overcast cloudy conditions and aerosol loads, the aerosol optical depth can be retrieved with an accuracy of approximately 54% whereas the cloud optical depth can be derived within 17% of the true value.

Creating cloud-free Landsat ETM+ data sets in tropical landscapes: cloud and cloud-shadow removal

Science.gov (United States)

Sebastián Martinuzzi; William A. Gould; Olga M. Ramos Gonzalez

2007-01-01

Clouds and cloud shadows are common features of visible and infrared remotelysensed images collected from many parts of the world, particularly in humid and tropical regions. We have developed a simple and semiautomated method to mask clouds and shadows in Landsat ETM+ imagery, and have developed a recent cloud-free composite of multitemporal images for Puerto Rico and...

Molecular Survey of Zoonotic Agents in Rodents and Other Small Mammals in Croatia.

Science.gov (United States)

Tadin, Ante; Tokarz, Rafal; Markotić, Alemka; Margaletić, Josip; Turk, Nenad; Habuš, Josipa; Svoboda, Petra; Vucelja, Marko; Desai, Aaloki; Jain, Komal; Lipkin, W Ian

2016-02-01

Croatia is a focus for many rodent-borne zoonosis. Here, we report a survey of 242 rodents and small mammals, including 43 Myodes glareolus, 131 Apodemus flavicollis, 53 Apodemus agrarius, three Apodemus sylvaticus, six Sorex araneus, four Microtus arvalis, one Microtus agrestis, and one Muscardinus avellanarius, collected at eight sites in Croatia over an 8-year period. Multiplex MassTag polymerase chain reaction (PCR) was used for detection of Borrelia, Rickettsia, Bartonella, Babesia, Ehrlichia, Anaplasma, Francisella tularensis, and Coxiella burnetii. Individual PCR assays were used for detection of Leptospira, lymphocytic choriomeningitis virus, orthopoxviruses, flaviviruses, hantaviruses, and Toxoplasma gondii. Of the rodents, 52 (21.5%) were infected with Leptospira, 9 (3.7%) with Borrelia miyamotoi, 5 (2%) with Borrelia afzelii, 29 (12.0%) with Bartonella, 8 (3.3%) with Babesia microti, 2 (0.8%) with Ehrlichia, 4 (1.7%) with Anaplasma, 2 (0.8%) with F. tularensis, 43 (17.8%) with hantaviruses, and 1 (0.4%) with an orthopoxvirus. Other agents were not detected. Multiple infections were found in 32 rodents (13.2%): dual infections in 26 rodents (10.7%), triple infections in four rodents (2.9%), and quadruple infections in two rodents (0.8%). Our findings indicate that rodents in Croatia harbor a wide range of bacteria and viruses that are pathogenic to humans. © The American Society of Tropical Medicine and Hygiene.

EDITORIAL: Aerosol cloud interactions—a challenge for measurements and modeling at the cutting edge of cloud climate interactions

Science.gov (United States)

Spichtinger, Peter; Cziczo, Daniel J.

2008-04-01

of water which have not yet been fully defined, for example cubic ice, are considered. The impact of natural aerosols on clouds, for example mineral dust, is also discussed, as well as other natural but highly sensitive effects such as the Wegener Bergeron Findeisen process. It is our belief that this focus issue represents a leap forward not only in reducing the uncertainty associated with the interaction of aerosols and clouds but also a new link between groups that must work together to continue progress in this important area of climate science. Focus on Aerosol Cloud Interactions Contents The articles below represent the first accepted contributions and further additions will appear in the near future. The global influence of dust mineralogical composition on heterogeneous ice nucleation in mixed-phase clouds C Hoose, U Lohmann, R Erdin and I Tegen Ice formation via deposition nucleation on mineral dust and organics: dependence of onset relative humidity on total particulate surface area Zamin A Kanji, Octavian Florea and Jonathan P D Abbatt The Explicit-Cloud Parameterized-Pollutant hybrid approach for aerosol cloud interactions in multiscale modeling framework models: tracer transport results William I Gustafson Jr, Larry K Berg, Richard C Easter and Steven J Ghan Cloud effects from boreal forest fire smoke: evidence for ice nucleation from polarization lidar data and cloud model simulations Kenneth Sassen and Vitaly I Khvorostyanov The effect of organic coating on the heterogeneous ice nucleation efficiency of mineral dust aerosols O Möhler, S Benz, H Saathoff, M Schnaiter, R Wagner, J Schneider, S Walter, V Ebert and S Wagner Enhanced formation of cubic ice in aqueous organic acid droplets Benjamin J Murray Quantification of water uptake by soot particles O B Popovicheva, N M Persiantseva, V Tishkova, N K Shonija and N A Zubareva Meridional gradients of light absorbing carbon over northern Europe D Baumgardner, G Kok, M Krämer and F Weidle

Zen of cloud learning cloud computing by examples on Microsoft Azure

CERN Document Server

Bai, Haishi

2014-01-01

Zen of Cloud: Learning Cloud Computing by Examples on Microsoft Azure provides comprehensive coverage of the essential theories behind cloud computing and the Windows Azure cloud platform. Sharing the author's insights gained while working at Microsoft's headquarters, it presents nearly 70 end-to-end examples with step-by-step guidance on implementing typical cloud-based scenarios.The book is organized into four sections: cloud service fundamentals, cloud solutions, devices and cloud, and system integration and project management. Each chapter contains detailed exercises that provide readers w

Wild Rodents as Experimental Intermediate Hosts of Lagochilascaris minor Leiper, 1909

Directory of Open Access Journals (Sweden)

Julieta Machado Paçô

1999-07-01

Full Text Available A total of 25 specimens of Cavia porcellus (guinea pig, 5 Dasyprocta agouti (agouti, and 22 Calomys callosus (vesper mice were inoculated with infective eggs of Lagochilascaris minor. The inoculum was prepared with embryonated eggs and orally administered to each individual animal through an esophagus probe. In parallel, 100 specimens of Felis catus domesticus were individually fed with 55-70 nodules containing 3rd-stage larvae encysted in tissues of infected rodents. Animals were examined and necropsied at different time intervals. The migration and encystment of L3 larva was observed in viscera, skeletal muscle, adipose and subcutaneous tissues from all rodents. Adult worms localized at abscesses in the cervical region, rhino, and oropharynx were recovered from domestic cats inoculated with infected rodent tissues. Through this study we can conclude that: (1 wild rodents act as intermediate hosts, characterizing this ascarid heteroxenic cycle; (2 in natural conditions rodents could possibly act as either intermediate hosts or paratenic hosts of Lagochilascaris minor; (3 despite the occurrence of an auto-infecting cycle, in prime-infection of felines (definite hosts the cycle is only completed when intermediate hosts are provided; and (4 in the wild, rodents could serve as a source of infection for humans as they are frequently used as food in regions with the highest incidence of human lagochilascariasis.

TURBULENCE DECAY AND CLOUD CORE RELAXATION IN MOLECULAR CLOUDS

International Nuclear Information System (INIS)

Gao, Yang; Law, Chung K.; Xu, Haitao

2015-01-01

The turbulent motion within molecular clouds is a key factor controlling star formation. Turbulence supports molecular cloud cores from evolving to gravitational collapse and hence sets a lower bound on the size of molecular cloud cores in which star formation can occur. On the other hand, without a continuous external energy source maintaining the turbulence, such as in molecular clouds, the turbulence decays with an energy dissipation time comparable to the dynamic timescale of clouds, which could change the size limits obtained from Jean's criterion by assuming constant turbulence intensities. Here we adopt scaling relations of physical variables in decaying turbulence to analyze its specific effects on the formation of stars. We find that the decay of turbulence provides an additional approach for Jeans' criterion to be achieved, after which gravitational infall governs the motion of the cloud core. This epoch of turbulence decay is defined as cloud core relaxation. The existence of cloud core relaxation provides a more complete understanding of the effect of the competition between turbulence and gravity on the dynamics of molecular cloud cores and star formation

COMPARATIVE STUDY OF CLOUD COMPUTING AND MOBILE CLOUD COMPUTING

OpenAIRE

Nidhi Rajak*, Diwakar Shukla

2018-01-01

Present era is of Information and Communication Technology (ICT) and there are number of researches are going on Cloud Computing and Mobile Cloud Computing such security issues, data management, load balancing and so on. Cloud computing provides the services to the end user over Internet and the primary objectives of this computing are resource sharing and pooling among the end users. Mobile Cloud Computing is a combination of Cloud Computing and Mobile Computing. Here, data is stored in...

Responses of nocturnal rodents to shrub encroachment in Banni grasslands, Gujarat, India

Science.gov (United States)

Jayadevan, A.

2016-12-01

Shrub encroachment is one of the greatest threats to grasslands globally. These woodlands can strongly influence the behaviour of small mammals adapted to more open habitats, which rely on high visibility for early detection of predators. In semi-arid grasslands, rodents are considered keystone species. Although shrub encroachment is known to negatively affect rodent assemblages, its impact on the foraging behaviour of rodents, which is known to vary in response to risky situations, is unknown. Understanding whether shrub encroachment alters such antipredator behaviour is important as antipredator behaviour can alter the distribution, abundance and ultimately, survival of prey species. In this study, I explored the effects of shrub encroachment on the foraging behaviour of nocturnal rodent communities in the Banni grasslands, India. I examined foraging behaviour, quantified using the giving-up density (GUD) framework and the number of rodent crossings around food patches, in two habitats that differed in the extent of shrub encroachment. Under the GUD framework, the amount of food left behind by a forager in a food patch reflects the costs of feeding at the patch. Higher GUDs imply higher foraging costs. I also investigated how removal of an invasive woody plant, Prosopis juliflora would affect foraging behaviour of nocturnal rodents. High shrub encroachment was associated with higher foraging costs (higher GUDs) and lower activity than the sparsely wooded habitat, likely due to low visibility in the densely wooded habitat. The dense habitat also supported a higher richness and relative abundance of generalist rodents than the sparse habitat, likely due to the increased heterogeneity of the habitat. The tree removal experiment revealed that rodents had lower GUDs (i.e., low foraging costs) after the event of tree cutting. This may be due to the reduction of cover in the habitat, leading to higher visibility and lower predation risk. My results suggest that shrub

Nutritional Evaluation of NASA's Rodent Food Bar Diet

Science.gov (United States)

Barrett, Joyce E.; Yu, Diane S.; Dalton, Bonnie P.

2000-01-01

Tests are being conducted on NASA's rodent Food Bar in preparation for long-term use as the rat and mouse diet aboard the International Space Station. Nutritional analyses are performed after the bars are manufactured and then repeated periodically to determine nutritional stability. The primary factors analyzed are protein, ash, fat, fiber, moisture, amino acids, fatty acids, and minerals. Nutrient levels are compared to values published in the National Research Council's dietary requirements for rodents, and also to those contained in several commonly used commercial rodent lab diets. The Food Bar is manufactured from a powdered diet to which moisture is added as it is processed through an extruder. The bars are dipped into potassium sorbate, vacuum-sealed, and irradiated. In order to determine nutrient changes during extrusion and irradiation, the powdered diet, the non-irradiated bars, and the irradiated bars are all analyzed. We have observed lower values for some nutrients (iodine, vitamin K, and iron) in the Food Bars compared with NRC requirements. Many nutrients in the Food Bars are contained at a higher level than levels in the NRC requirements. An additional factor we are investigating is the 26% moisture level in the Food Bars, which drops to about 15% within a week, compared to a stable 10% moisture in many standard lab chow diets. In addition to the nutritional analyses, the food bar is being fed to several strains of rats and mice, and feeding study and necropsy results are being observed (Barrett et al, unpublished data). Information from the nutritional analyses and from the rodent studies will enable us to recommend the formulation that will most adequately meet the rodent Food Bar requirements for long-term use aboard the Space Station.

The hip adductor muscle group in caviomorph rodents: anatomy and homology.

Science.gov (United States)

García-Esponda, César M; Candela, Adriana M

2015-06-01

Anatomical comparative studies including myological data of caviomorph rodents are relatively scarce, leading to a lack of use of muscular features in cladistic and morphofunctional analyses. In rodents, the hip adductor muscles constitute an important group of the hindlimb musculature, having an important function during the beginning of the stance phase. These muscles are subdivided in several distinct ways in the different clades of rodents, making the identification of their homologies hard to establish. In this contribution we provide a detailed description of the anatomical variation of the hip adductor muscle group of different genera of caviomorph rodents and identify the homologies of these muscles in the context of Rodentia. On this basis, we identify the characteristic pattern of the hip adductor muscles in Caviomorpha. Our results indicate that caviomorphs present a singular pattern of the hip adductor musculature that distinguishes them from other groups of rodents. They are characterized by having a single m. adductor brevis that includes solely its genicular part. This muscle, together with the m. gracilis, composes a muscular sheet that is medial to all other muscles of the hip adductor group. Both muscles probably have a synergistic action during locomotion, where the m. adductor brevis reinforces the multiple functions of the m. gracilis in caviomorphs. Mapping of analyzed myological characters in the context of Rodentia indicates that several features are recovered as potential synapomorphies of caviomorphs. Thus, analysis of the myological data described here adds to the current knowledge of caviomorph rodents from anatomical and functional points of view, indicating that this group has features that clearly differentiate them from other rodents. Copyright © 2015 Elsevier GmbH. All rights reserved.

Review of Cloud Computing and existing Frameworks for Cloud adoption

OpenAIRE

Chang, Victor; Walters, Robert John; Wills, Gary

2014-01-01

This paper presents a selected review for Cloud Computing and explains the benefits and risks of adopting Cloud Computing in a business environment. Although all the risks identified may be associated with two major Cloud adoption challenges, a framework is required to support organisations as they begin to use Cloud and minimise risks of Cloud adoption. Eleven Cloud Computing frameworks are investigated and a comparison of their strengths and limitations is made; the result of the comparison...

Helminth Infections of Rodents and Their Zoonotic Importance in Boyer-Ahmad District, Southwestern Iran.

Science.gov (United States)

Ranjbar, Mohammad Javad; Sarkari, Bahador; Mowlavi, Gholam Reza; Seifollahi, Zeinab; Moshfe, Abdolali; Abdolahi Khabisi, Samaneh; Mobedi, Iraj

2017-01-01

Rodents are considered as reservoirs of various zoonotic diseases including helminthic infections. The current study aimed to evaluate the prevalence of helminth infections in rodents, in Boyer-Ahmad district, Southwestern Iran. Overall, 52 rodents were captured from various areas of the district by Sherman live traps. The animals were then euthanized and dissected. During necropsy, each organ was examined macroscopically for presence of any cyst or visible parasite. The gastrointestinal tract was removed and their contents were evaluated for larva or adult worms. Trichinella larvae in the rodents' muscles were investigated by both digestion and pathological methods. Twenty-eight (53.8%) of the trapped rodents were male. The rodents were including 25 (48.1%) Meriones persicus , 1(1.9%) Calomyscus bailwardi , 1 (1.9%) Arvicola terresterris , 7 (13.5%) Rattus rattus , 8 (15.4%) R. norvegicus , and 10 (19.2%) Apodemus sylvaticus . Of them, 38 (73.0%) were infected with at least one helminth. Collected rodents were infected with Hymenolepis diminuta (50%), Hymenolepis nana fraterna (28.8%), Skrjabinotaenia sp. (15.4%), Anoplocephalidae sp. (15.4%), Cysticercus fasciolaris (5.8%), Trichuris muris (36.5%), Aspiculuris tetraptera (15.4%), Syphacia sp. (5.7%), Rictularia sp. (15.4%), Trichostrongylus sp. (3.8%), and Gongylonema sp. (3.8%). M. persicus was the most (84%) infected rodent, yet the differences between rodent genus and helminth infectivity were not statistically significant ( P >0.05). The rodents in Boyer-Ahmad district are infected with different helminths infections that some of them are recognized as threat to human health.

Bone morphology of the hind limbs in two caviomorph rodents.

Science.gov (United States)

de Araújo, F A P; Sesoko, N F; Rahal, S C; Teixeira, C R; Müller, T R; Machado, M R F

2013-04-01

In order to evaluate the hind limbs of caviomorph rodents a descriptive analysis of the Cuniculus paca (Linnaeus, 1766) and Hydrochoerus hydrochaeris (Linnaeus, 1766) was performed using anatomical specimens, radiography, computed tomography (CT) and full-coloured prototype models to generate bone anatomy data. The appendicular skeleton of the two largest rodents of Neotropical America was compared with the previously reported anatomical features of Rattus norvegicus (Berkenhout, 1769) and domestic Cavia porcellus (Linnaeus, 1758). The structures were analyzed macroscopically and particular findings of each species reported. Features including the presence of articular fibular projection and lunulae were observed in the stifle joint of all rodents. Imaging aided in anatomical description and, specifically in the identification of bone structures in Cuniculus paca and Hydrochoerus hydrochaeris. The imaging findings were correlated with the anatomical structures observed. The data may be used in future studies comparing these animals to other rodents and mammalian species. © 2012 Blackwell Verlag GmbH.

First Isolates of Leptospira spp., from Rodents Captured in Angola.

Science.gov (United States)

Fortes-Gabriel, Elsa; Carreira, Teresa; Vieira, Maria Luísa

2016-05-04

Rodents play an important role in the transmission of pathogenic Leptospira spp. However, in Angola, neither the natural reservoirs of these spirochetes nor leptospirosis diagnosis has been considered. Regarding this gap, we captured rodents in Luanda and Huambo provinces to identify circulating Leptospira spp. Rodent kidney tissue was cultured and DNA amplified and sequenced. Culture isolates were evaluated for pathogenic status and typing with rabbit antisera; polymerase chain reaction (PCR) and sequencing were also performed. A total of 37 rodents were captured: Rattus rattus (15, 40.5%), Rattus norvegicus (9, 24.3%), and Mus musculus (13, 35.2%). Leptospiral DNA was amplified in eight (21.6%) kidney samples. From the cultures, we obtained four (10.8%) Leptospira isolates belonging to the Icterohaemorrhagiae and Ballum serogroups of Leptospira interrogans and Leptospira borgpetersenii genospecies, respectively. This study provides information about circulating leptospires spread by rats and mice in Angola. © The American Society of Tropical Medicine and Hygiene.

Rodent Research on the International Space Station - A Look Forward

Science.gov (United States)

Kapusta, A. B.; Smithwick, M.; Wigley, C. L.

2014-01-01

Rodent Research on the International Space Station (ISS) is one of the highest priority science activities being supported by NASA and is planned for up to two flights per year. The first Rodent Research flight, Rodent Research-1 (RR-1) validates the hardware and basic science operations (dissections and tissue preservation). Subsequent flights will add new capabilities to support rodent research on the ISS. RR-1 will validate the following capabilities: animal husbandry for up to 30 days, video downlink to support animal health checks and scientific analysis, on-orbit dissections, sample preservation in RNA. Later and formalin, sample transfer from formalin to ethanol (hindlimbs), rapid cool-down and subsequent freezing at -80 of tissues and carcasses, sample return and recovery. RR-2, scheduled for SpX-6 (Winter 20142015) will add the following capabilities: animal husbandry for up to 60 days, RFID chip reader for individual animal identification, water refill and food replenishment, anesthesia and recovery, bone densitometry, blood collection (via cardiac puncture), blood separation via centrifugation, soft tissue fixation in formalin with transfer to ethanol, and delivery of injectable drugs that require frozen storage prior to use. Additional capabilities are also planned for future flights and these include but are not limited to male mice, live animal return, and the development of experiment unique equipment to support science requirements for principal investigators that are selected for flight. In addition to the hardware capabilities to support rodent research the Crew Office has implemented a training program in generic rodent skills for all USOS crew members during their pre-assignment training rotation. This class includes training in general animal handling, euthanasia, injections, and dissections. The dissection portion of this training focuses on the dissection of the spleen, liver, kidney with adrenals, brain, eyes, and hindlimbs. By achieving and

Cloud CCN feedback

International Nuclear Information System (INIS)

Hudson, J.G.

1992-01-01

Cloud microphysics affects cloud albedo precipitation efficiency and the extent of cloud feedback in response to global warming. Compared to other cloud parameters, microphysics is unique in its large range of variability and the fact that much of the variability is anthropogenic. Probably the most important determinant of cloud microphysics is the spectra of cloud condensation nuclei (CCN) which display considerable variability and have a large anthropogenic component. When analyzed in combination three field observation projects display the interrelationship between CCN and cloud microphysics. CCN were measured with the Desert Research Institute (DRI) instantaneous CCN spectrometer. Cloud microphysical measurements were obtained with the National Center for Atmospheric Research Lockheed Electra. Since CCN and cloud microphysics each affect the other a positive feedback mechanism can result

Public health implications of changing rodent importation patterns— United States, 1999–2013

Science.gov (United States)

Lankau, Emily W.; Sinclair, Julie R.; Schroeder, Betsy A.; Galland, G. Gale; Marano, Nina

2015-01-01

Summary The United States imports a large volume of live wild and domestic animal species; these animals pose a demonstrated risk for introduction of zoonotic diseases. Rodents are imported for multiple purposes, including scientific research, zoo exhibits, and the pet trade. Current U.S. public health regulatory restrictions specific to rodent importation pertain only to those of African origin. To understand the impacts of these regulations and the potential public health risks of international rodent trade to the United States, we evaluated live rodent import records during 1999 –2013 by shipment volume and geographic origin, source (e.g., wild -caught versus captive-or commercially bred), intended purpose, and rodent taxonomy. Live rodent imports increased from 2,737 animals during 1999 to 173,761 animals during 2013. Increases in both the number and size of shipments contributed to this trend. The proportion of wild-captured imports declined from 75% during 1999 to guinea pigs, and hamsters arriving from other countries in North America were predominant taxa underlying this trend . After 2003, African-origin imports became sporadic events under the federal permit process. These patterns suggest development of large -scale captive rodent breeding markets abroad for commercial sale in the United States. While the shift from wild-captured imports alleviates many conservation concerns and risks for novel disease emergence, such consolidated sourcing might elevate exposure risks for zoonotic diseases associated with high-density rodent breeding(e.g. , lymphocytic choriomeningitis or salmonellosis). A responsive border health system must periodically re-evaluate importation regulations in conjunction with key stakeholders to ensure a balance between the economic benefits of rodent trade against the potential public health risks. PMID:26245515

Harvesting behaviour of three central European rodents: Identifying the rodent pest in cereals

Czech Academy of Sciences Publication Activity Database

Heroldová, Marta; Tkadlec, Emil

2011-01-01

Roč. 30, č. 1 (2011), s. 82-84 ISSN 0261-2194 R&D Projects: GA MZe QH72075 Institutional research plan: CEZ:AV0Z60930519 Keywords : Apodemus sylvaticus * Apodemus uralensis * feeding behaviour * lab experiments * Microtus arvalis * rodent pest control Subject RIV: GF - Plant Pathology, Vermin, Weed, Plant Protection Impact factor: 1.402, year: 2011

Preliminarily Assessment of Long-term Cloud Top Heights in Central Taiwan

Science.gov (United States)

Lai, Y. J.; Po-Hsiung, L.

2015-12-01

The Xitou region, as the epitome of mid-elevation forest ecosystem and known as a famous forest recreation area in Taiwan. Although two disasters, "921 earthquake" in 1999 and typhoon Toraji in 2001, heavily hit this area and cause a significant reduction in visitors from 1 to about 0.4 million per year, the tourists have returned after the reconstruction in 2003 and approached 1.5 million high since 2010. The high quantity of tourists obviously drives the development of tourism industry which, unfortunately, increases the local sources of heating. A preliminarily analysis showed the warming rate was 0.29 oC/decade for June 2005 to May 2013 while from the 1940s to the 1980s, it was only 0.1 oC/decade. The warming pattern in Xitou region is similar to the global warming situation that a more dramatic trend happened during the past 10 years. The change of land use, which derived from the pressure of tourism industry, might accelerate regional climate warming. For the purpose of understanding cloud response to anthropogenic forcing, the long-term 1-km spatial resolution cloud top heights (cth) data sets (collection 6) from the Moderate Resolution Imaging Spectroradiometer (MODIS) were assessed. The results showed the annual cloud event amounts of the Terra and Aqua changed insignificantly since 2003 disregard of the cth. However, the cloud fraction of the cth less than 2000m was 18% in 2003 and dropped dramatically to 7% since 2011. Correspondingly, the cth between 2000m to 4000m was increased from 35% in 2003 to 45% in 2014. Further analysis the nighttime events indicated similar pattern but only 6% different between 2003 and 2014. The Aqua daytime events showed a more dramatic fraction anomaly which was decreased 18% at the cth less than 2000m and increased 18% at the cth between 2000m to 4000m. This preliminary assessment represents the cloud is pushing higher which might be caused by the anthropogenic forcing during the last decade. However, this study also found

Biogenic, urban, and wildfire influences on the molecular composition of dissolved organic compounds in cloud water

Science.gov (United States)

Cook, Ryan D.; Lin, Ying-Hsuan; Peng, Zhuoyu; Boone, Eric; Chu, Rosalie K.; Dukett, James E.; Gunsch, Matthew J.; Zhang, Wuliang; Tolic, Nikola; Laskin, Alexander; Pratt, Kerri A.

2017-12-01

Organic aerosol formation and transformation occurs within aqueous aerosol and cloud droplets, yet little is known about the composition of high molecular weight organic compounds in cloud water. Cloud water samples collected at Whiteface Mountain, New York, during August-September 2014 were analyzed by ultra-high-resolution mass spectrometry to investigate the molecular composition of dissolved organic carbon, with a focus on sulfur- and nitrogen-containing compounds. Organic molecular composition was evaluated in the context of cloud water inorganic ion concentrations, pH, and total organic carbon concentrations to gain insights into the sources and aqueous-phase processes of the observed high molecular weight organic compounds. Cloud water acidity was positively correlated with the average oxygen : carbon ratio of the organic constituents, suggesting the possibility for aqueous acid-catalyzed (prior to cloud droplet activation or during/after cloud droplet evaporation) and/or radical (within cloud droplets) oxidation processes. Many tracer compounds recently identified in laboratory studies of bulk aqueous-phase reactions were identified in the cloud water. Organosulfate compounds, with both biogenic and anthropogenic volatile organic compound precursors, were detected for cloud water samples influenced by air masses that had traveled over forested and populated areas. Oxidation products of long-chain (C10-12) alkane precursors were detected during urban influence. Influence of Canadian wildfires resulted in increased numbers of identified sulfur-containing compounds and oligomeric species, including those formed through aqueous-phase reactions involving methylglyoxal. Light-absorbing aqueous-phase products of syringol and guaiacol oxidation were observed in the wildfire-influenced samples, and dinitroaromatic compounds were observed in all cloud water samples (wildfire, biogenic, and urban-influenced). Overall, the cloud water molecular composition depended on

Cloud Governance

DEFF Research Database (Denmark)

Berthing, Hans Henrik

Denne præsentation beskriver fordele og værdier ved anvendelse af Cloud Computing. Endvidere inddrager resultater fra en række internationale analyser fra ISACA om Cloud Computing.......Denne præsentation beskriver fordele og værdier ved anvendelse af Cloud Computing. Endvidere inddrager resultater fra en række internationale analyser fra ISACA om Cloud Computing....

The response of human and rodent cells to hyperthermia

International Nuclear Information System (INIS)

Roizin-Towle, L.; Pirro, J.P.

1991-01-01

Inherent cellular radiosensitivity in vitro has been shown to be a good predictor of human tumor response in vivo. In contrast, the importance of the intrinsic thermosensitivity of normal and neoplastic human cells as a factor in the responsiveness of human tumors to adjuvant hyperthermia has never been analyzed systematically. A comparison of thermal sensitivity and thermo-radiosensitization in four rodent and eight human-derived cell lines was made in vitro. Arrhenius plots indicated that the rodent cells were more sensitive to heat killing than the human, and the break-point was 0.5 degrees C higher for the human than rodent cells. The relationship between thermal sensitivity and the interaction of heat with X rays at low doses was documented by thermal enhancement ratios (TER's). Cells received either a 1 hr exposure to 43 degrees C or a 20 minute treatment at 45 degrees C before exposure to 300 kVp X rays. Thermal enhancement ratios ranged from 1.0 to 2.7 for human cells heated at 43 degrees C and from 2.1 to 5.3 for heat exposures at 45 degrees C. Thermal enhancement ratios for rodent cells were generally 2 to 3 times higher than for human cells, because of the fact that the greater thermosensitivity of rodent cells results in a greater enhancement of radiation damage. Intrinsic thermosensitivity of human cells has relevance to the concept of thermal dose; intrinsic thermo-radiosensitization of a range of different tumor cells is useful in documenting the interactive effects of radiation combined with heat

Visual Landmarks Facilitate Rodent Spatial Navigation in Virtual Reality Environments

Science.gov (United States)

Youngstrom, Isaac A.; Strowbridge, Ben W.

2012-01-01

Because many different sensory modalities contribute to spatial learning in rodents, it has been difficult to determine whether spatial navigation can be guided solely by visual cues. Rodents moving within physical environments with visual cues engage a variety of nonvisual sensory systems that cannot be easily inhibited without lesioning brain…

Comparisons of Satellite-Deduced Overlapping Cloud Properties and CALIPSO CloudSat Data

Science.gov (United States)

Chang, Fu-Lung; Minnis, Patrick; Lin, Bing; Sun-Mack, Sunny

2010-01-01

Introduction to the overlapped cloud properties derived from polar-orbiting (MODIS) and geostationary (GOES-12, -13, Meteosat-8, -9, etc.) meteorological satellites, which are produced at the NASA Langley Research Center (LaRC) cloud research & development team (NASA lead scientist: Dr. Patrick Minnis). Comparison of the LaRC CERES MODIS Edition-3 overlapped cloud properties to the CALIPSO and the CloudSat active sensing data. High clouds and overlapped clouds occur frequently as deduced by CALIPSO (44 & 25%), CloudSat (25 & 4%), and MODIS (37 & 6%). Large fractions of optically-thin cirrus and overlapped clouds are deduced from CALIPSO, but much smaller fractions are from CloudSat and MODIS. For overlapped clouds, the averaged upper-layer CTHs are about 12.8 (CALIPSO), 10.9 (CloudSat) and 10 km (MODIS), and the averaged lower-layer CTHs are about 3.6 (CALIPSO), 3.2 (CloudSat) and 3.9 km (MODIS). Based on comparisons of upper and lower-layer cloud properties as deduced from the MODIS, CALIPSO and CloudSat data, more enhanced passive satellite methods for retrieving thin cirrus and overlapped cloud properties are needed and are under development.

The impact of smoke from forest fires on the spectral dispersion of cloud droplet size distributions in the Amazonian region

International Nuclear Information System (INIS)

Martins, J A; Silva Dias, M A F

2009-01-01

In this paper, the main microphysical characteristics of clouds developing in polluted and clean conditions in the biomass-burning season of the Amazon region are examined, with special attention to the spectral dispersion of the cloud droplet size distribution and its potential impact on climate modeling applications. The dispersion effect has been shown to alter the climate cooling predicted by the so-called Twomey effect. In biomass-burning polluted conditions, high concentrations of low dispersed cloud droplets are found. Clean conditions revealed an opposite situation. The liquid water content (0.43 ± 0.19 g m -3 ) is shown to be uncorrelated with the cloud drop number concentration, while the effective radius is found to be very much correlated with the relative dispersion of the size distribution (R 2 = 0.81). The results suggest that an increase in cloud condensation nuclei concentration from biomass-burning aerosols may lead to an additional effect caused by a decrease in relative dispersion. Since the dry season in the Amazonian region is vapor limiting, the dispersion effect of cloud droplet size distributions could be substantially larger than in other polluted regions.

Securing the Cloud Cloud Computer Security Techniques and Tactics

CERN Document Server

Winkler, Vic (JR)

2011-01-01

As companies turn to cloud computing technology to streamline and save money, security is a fundamental concern. Loss of certain control and lack of trust make this transition difficult unless you know how to handle it. Securing the Cloud discusses making the move to the cloud while securing your peice of it! The cloud offers felxibility, adaptability, scalability, and in the case of security-resilience. This book details the strengths and weaknesses of securing your company's information with different cloud approaches. Attacks can focus on your infrastructure, communications network, data, o

Geographic patterns of genetic variation and conservation consequences in three South American rodents.

Science.gov (United States)

Miranda, Gustavo B; Andrades-Miranda, Jaqueline; Oliveira, Luiz F B; Langguth, Alfredo; Mattevi, Margarete S

2007-12-01

In this study, the geographic patterns of genetic variation of three rodent species belonging to the tribe Oryzomyini were investigated using the mitochondrial cytochrome b and nuclear IRBP genes in biomes that are undergoing degradation processes to a greater or lesser degree. The samples are from 25 collecting localities distributed throughout the Amazon, Cerrado, Atlantic Forest, and Pampa biomes. The results show that the three species have a population and geographic structure, besides being in demographic equilibrium. The phylogenetic analyses performed on Euryoryzomys russatus and Hylaeamys megacephalus showed these specimens grouped in three distinct clades forming geographic gradients (North-South direction in H. megacephalus). Intraspecific genetic divergence was higher in H. megacephalus (4.53%), followed by E. russatus (1.79%), and lowest in Sooretamys angouya (0.88%). The results obtained indicate that, necessarily, the management strategies to preserve genetic diversity should be different for each species, since each of them presented specific population parameters.

Cloud management and security

CERN Document Server

Abbadi, Imad M

2014-01-01

Written by an expert with over 15 years' experience in the field, this book establishes the foundations of Cloud computing, building an in-depth and diverse understanding of the technologies behind Cloud computing. In this book, the author begins with an introduction to Cloud computing, presenting fundamental concepts such as analyzing Cloud definitions, Cloud evolution, Cloud services, Cloud deployment types and highlighting the main challenges. Following on from the introduction, the book is divided into three parts: Cloud management, Cloud security, and practical examples. Part one presents the main components constituting the Cloud and federated Cloud infrastructure(e.g., interactions and deployment), discusses management platforms (resources and services), identifies and analyzes the main properties of the Cloud infrastructure, and presents Cloud automated management services: virtual and application resource management services. Part two analyzes the problem of establishing trustworthy Cloud, discuss...

Relationships between rodent white adipose fat pads and human white adipose fat depots

Directory of Open Access Journals (Sweden)

Daniella E. Chusyd

2016-04-01

Full Text Available The objective of this review was to compare and contrast the physiological and metabolic profiles of rodent white adipose fat pads with white adipose fat depots in humans. Human fat distribution and its metabolic consequences have received extensive attention, but much of what has been tested in translational research has relied heavily on rodents. Unfortunately, the validity of using rodent fat pads as a model of human adiposity has received less attention. There is a surprisingly lack of studies demonstrating an analogous relationship between rodent and human adiposity on obesity-related comorbidities. Therefore, we aimed to compare known similarities and disparities in terms of white adipose tissue development and distribution, sexual dimorphism, weight loss, adipokine secretion, and aging. While the literature supports the notion that many similarities exist between rodents and humans, notable differences emerge related to fat deposition and function of white adipose tissue. Thus, further research is warranted to more carefully define the strengths and limitations of rodent white adipose tissue as a model for humans, with a particular emphasis on comparable fat depots, such as mesenteric fat.

The Ethics of Rodent Control

NARCIS (Netherlands)

Meerburg, B.G.; Brom, F.W.A.; Kijlstra, A.

2008-01-01

Because western societies generally see animals as objects of moral concern, demands have been made on the way they are treated, e.g. during animal experimentation. In the case of rodent pests, however, inhumane control methods are often applied. This inconsistency in the human-animal relationship

Cloud computing patterns fundamentals to design, build, and manage cloud applications

CERN Document Server

Fehling, Christoph; Retter, Ralph; Schupeck, Walter; Arbitter, Peter

2014-01-01

The current work provides CIOs, software architects, project managers, developers, and cloud strategy initiatives with a set of architectural patterns that offer nuggets of advice on how to achieve common cloud computing-related goals. The cloud computing patterns capture knowledge and experience in an abstract format that is independent of concrete vendor products. Readers are provided with a toolbox to structure cloud computing strategies and design cloud application architectures. By using this book cloud-native applications can be implemented and best suited cloud vendors and tooling for i

Neighbourhood structure and light availability influence the variations in plant design of shrubs in two cloud forests of different successional status.

Science.gov (United States)

Guzmán Q, J Antonio; Cordero, Roberto A

2016-07-01

Plant design refers to the construction of the plant body or its constituent parts in terms of form and function. Although neighbourhood structure is recognized as a factor that limits plant survival and species coexistence, its relative importance in plant design is not well understood. We conducted field research to analyse how the surrounding environment of neighbourhood structure and related effects on light availability are associated with changes in plant design in two understorey plants (Palicourea padifolia and Psychotria elata) within two successional stages of a cloud forest in Costa Rica. Features of plant neighbourhood physical structure and light availability, estimated using hemispherical photographs, were used as variables that reflect the surrounding environment. Measures of plant biomechanics, allometry, branching and plant slenderness were used as functional plant attributes that reflect plant design. We propose a framework using a partial least squares path model and used it to test this association. The multidimensional response of plant design of these species suggests that decreases in the height-based factor of safety and increases in mechanical load and developmental stability are influenced by increases in maximum height of neighbours and a distance-dependence interference index more than neighbourhood plant density or neighbour aggregation. Changes in plant branching and slenderness are associated positively with light availability and negatively with canopy cover. Although it has been proposed that plant design varies according to plant density and light availability, we found that neighbour size and distance-dependence interference are associated with changes in biomechanics, allometry and branching, and they must be considered as key factors that contribute to the adaptation and coexistence of these plants in this highly diverse forest community. © The Author 2016. Published by Oxford University Press on behalf of the Annals of Botany

Military clouds: utilization of cloud computing systems at the battlefield

Science.gov (United States)

Süleyman, Sarıkürk; Volkan, Karaca; İbrahim, Kocaman; Ahmet, Şirzai

2012-05-01

Cloud computing is known as a novel information technology (IT) concept, which involves facilitated and rapid access to networks, servers, data saving media, applications and services via Internet with minimum hardware requirements. Use of information systems and technologies at the battlefield is not new. Information superiority is a force multiplier and is crucial to mission success. Recent advances in information systems and technologies provide new means to decision makers and users in order to gain information superiority. These developments in information technologies lead to a new term, which is known as network centric capability. Similar to network centric capable systems, cloud computing systems are operational today. In the near future extensive use of military clouds at the battlefield is predicted. Integrating cloud computing logic to network centric applications will increase the flexibility, cost-effectiveness, efficiency and accessibility of network-centric capabilities. In this paper, cloud computing and network centric capability concepts are defined. Some commercial cloud computing products and applications are mentioned. Network centric capable applications are covered. Cloud computing supported battlefield applications are analyzed. The effects of cloud computing systems on network centric capability and on the information domain in future warfare are discussed. Battlefield opportunities and novelties which might be introduced to network centric capability by cloud computing systems are researched. The role of military clouds in future warfare is proposed in this paper. It was concluded that military clouds will be indispensible components of the future battlefield. Military clouds have the potential of improving network centric capabilities, increasing situational awareness at the battlefield and facilitating the settlement of information superiority.

Clustering, randomness, and regularity in cloud fields. 4: Stratocumulus cloud fields

Science.gov (United States)

Lee, J.; Chou, J.; Weger, R. C.; Welch, R. M.

1994-01-01

To complete the analysis of the spatial distribution of boundary layer cloudiness, the present study focuses on nine stratocumulus Landsat scenes. The results indicate many similarities between stratocumulus and cumulus spatial distributions. Most notably, at full spatial resolution all scenes exhibit a decidedly clustered distribution. The strength of the clustering signal decreases with increasing cloud size; the clusters themselves consist of a few clouds (less than 10), occupy a small percentage of the cloud field area (less than 5%), contain between 20% and 60% of the cloud field population, and are randomly located within the scene. In contrast, stratocumulus in almost every respect are more strongly clustered than are cumulus cloud fields. For instance, stratocumulus clusters contain more clouds per cluster, occupy a larger percentage of the total area, and have a larger percentage of clouds participating in clusters than the corresponding cumulus examples. To investigate clustering at intermediate spatial scales, the local dimensionality statistic is introduced. Results obtained from this statistic provide the first direct evidence for regularity among large (more than 900 m in diameter) clouds in stratocumulus and cumulus cloud fields, in support of the inhibition hypothesis of Ramirez and Bras (1990). Also, the size compensated point-to-cloud cumulative distribution function statistic is found to be necessary to obtain a consistent description of stratocumulus cloud distributions. A hypothesis regarding the underlying physical mechanisms responsible for cloud clustering is presented. It is suggested that cloud clusters often arise from 4 to 10 triggering events localized within regions less than 2 km in diameter and randomly distributed within the cloud field. As the size of the cloud surpasses the scale of the triggering region, the clustering signal weakens and the larger cloud locations become more random.

Clustering, randomness, and regularity in cloud fields. 4. Stratocumulus cloud fields

Science.gov (United States)

Lee, J.; Chou, J.; Weger, R. C.; Welch, R. M.

1994-07-01

To complete the analysis of the spatial distribution of boundary layer cloudiness, the present study focuses on nine stratocumulus Landsat scenes. The results indicate many similarities between stratocumulus and cumulus spatial distributions. Most notably, at full spatial resolution all scenes exhibit a decidedly clustered distribution. The strength of the clustering signal decreases with increasing cloud size; the clusters themselves consist of a few clouds (less than 10), occupy a small percentage of the cloud field area (less than 5%), contain between 20% and 60% of the cloud field population, and are randomly located within the scene. In contrast, stratocumulus in almost every respect are more strongly clustered than are cumulus cloud fields. For instance, stratocumulus clusters contain more clouds per cluster, occupy a larger percentage of the total area, and have a larger percentage of clouds participating in clusters than the corresponding cumulus examples. To investigate clustering at intermediate spatial scales, the local dimensionality statistic is introduced. Results obtained from this statistic provide the first direct evidence for regularity among large (>900 m in diameter) clouds in stratocumulus and cumulus cloud fields, in support of the inhibition hypothesis of Ramirez and Bras (1990). Also, the size compensated point-to-cloud cumulative distribution function statistic is found to be necessary to obtain a consistent description of stratocumulus cloud distributions. A hypothesis regarding the underlying physical mechanisms responsible for cloud clustering is presented. It is suggested that cloud clusters often arise from 4 to 10 triggering events localized within regions less than 2 km in diameter and randomly distributed within the cloud field. As the size of the cloud surpasses the scale of the triggering region, the clustering signal weakens and the larger cloud locations become more random.

Cloud blueprints for integrating and managing cloud federations

NARCIS (Netherlands)

Papazoglou, M.; Heisel, M.

2012-01-01

Contemporary cloud technologies face insurmountable obstacles. They follow a pull-based, producer-centric trajectory to development where cloud consumers have to ‘squeeze and bolt’ applications onto cloud APIs. They also introduce a monolithic SaaS/PaaS/IaaS stack where a one-size-fits-all mentality

Galaxy CloudMan: delivering cloud compute clusters.

Science.gov (United States)

Afgan, Enis; Baker, Dannon; Coraor, Nate; Chapman, Brad; Nekrutenko, Anton; Taylor, James

2010-12-21

Widespread adoption of high-throughput sequencing has greatly increased the scale and sophistication of computational infrastructure needed to perform genomic research. An alternative to building and maintaining local infrastructure is "cloud computing", which, in principle, offers on demand access to flexible computational infrastructure. However, cloud computing resources are not yet suitable for immediate "as is" use by experimental biologists. We present a cloud resource management system that makes it possible for individual researchers to compose and control an arbitrarily sized compute cluster on Amazon's EC2 cloud infrastructure without any informatics requirements. Within this system, an entire suite of biological tools packaged by the NERC Bio-Linux team (http://nebc.nerc.ac.uk/tools/bio-linux) is available for immediate consumption. The provided solution makes it possible, using only a web browser, to create a completely configured compute cluster ready to perform analysis in less than five minutes. Moreover, we provide an automated method for building custom deployments of cloud resources. This approach promotes reproducibility of results and, if desired, allows individuals and labs to add or customize an otherwise available cloud system to better meet their needs. The expected knowledge and associated effort with deploying a compute cluster in the Amazon EC2 cloud is not trivial. The solution presented in this paper eliminates these barriers, making it possible for researchers to deploy exactly the amount of computing power they need, combined with a wealth of existing analysis software, to handle the ongoing data deluge.

Cloud blueprint : A model-driven approach to configuring federated clouds

NARCIS (Netherlands)

Papazoglou, M.; Abello, A.; Bellatreche, L.; Benatallah, B.

2012-01-01

Current cloud solutions are fraught with problems. They introduce a monolithic cloud stack that imposes vendor lock-in and donot permit developers to mix and match services freely from diverse cloud service tiers and configure them dynamically to address application needs. Cloud blueprinting is a

Morphology and ecology of sibon snakes (Squamata: Dipsadidae from two forests in Central America

Directory of Open Access Journals (Sweden)

Todd R. Lewis

2013-06-01

Full Text Available Physical measurements, abundance, and ecological observations were recorded for Sibon annulatus,S. argus, S. longifrens, and S. nebulatus at two Neotropical habitats: a lowland swamp forest in Costa Rica and a montane cloud forest in Panama. Fourty-four and 58 adult snakes were recorded from Costa Rica and Panama, respectively. Differences in morphology and body condition showed minimal significant differences among species from both geographical locations. Observations of feeding, reproduction, abundance, distribution and a new size record for S. annulatus are discussed.

Thin Cloud Detection Method by Linear Combination Model of Cloud Image

Science.gov (United States)

Liu, L.; Li, J.; Wang, Y.; Xiao, Y.; Zhang, W.; Zhang, S.

2018-04-01

The existing cloud detection methods in photogrammetry often extract the image features from remote sensing images directly, and then use them to classify images into cloud or other things. But when the cloud is thin and small, these methods will be inaccurate. In this paper, a linear combination model of cloud images is proposed, by using this model, the underlying surface information of remote sensing images can be removed. So the cloud detection result can become more accurate. Firstly, the automatic cloud detection program in this paper uses the linear combination model to split the cloud information and surface information in the transparent cloud images, then uses different image features to recognize the cloud parts. In consideration of the computational efficiency, AdaBoost Classifier was introduced to combine the different features to establish a cloud classifier. AdaBoost Classifier can select the most effective features from many normal features, so the calculation time is largely reduced. Finally, we selected a cloud detection method based on tree structure and a multiple feature detection method using SVM classifier to compare with the proposed method, the experimental data shows that the proposed cloud detection program in this paper has high accuracy and fast calculation speed.

The water economy of South American desert rodents: from integrative to molecular physiological ecology.

Science.gov (United States)

Bozinovic, Francisco; Gallardo, Pedro

2006-01-01

Rodents from arid and semi-arid habitats live under conditions where the spatial and temporal availability of free water is limited, or scarce, thus forcing these rodents to deal with the problem of water conservation. The response of rodents to unproductive desert environments and water deficits has been intensively investigated in many deserts of the world. However, current understanding of the cellular, systemic and organismal physiology of water economy relies heavily on short-term, laboratory-oriented experiments, which usually focus on responses at isolated levels of biological organization. In addition, studies in small South American mammals are scarce. Indeed xeric habitats have existed in South America for a long time and it is intriguing why present day South American desert rodents do not show the wide array of adaptive traits to desert life observed for rodents on other continents. Several authors have pointed out that South American desert rodents lack physiological and energetic specialization for energy and water conservation, hypothesizing that their success is based more on behavioral and ecological strategies. We review phenotypic flexibility and physiological diversity in water flux rate, urine osmolality, and expression of water channels in South American desert-dwelling rodents. As far as we know, this is the first review of integrative studies at cellular, systemic and organismal levels. Our main conclusion is that South American desert rodents possess structural as well as physiological systems for water conservation, which are as remarkable as those found in "classical" rodents inhabiting other desert areas of the world.

Helminth Infections of Rodents and Their Zoonotic Importance in Boyer-Ahmad District, Southwestern Iran

Directory of Open Access Journals (Sweden)

Mohammad Javad RANJBAR

2017-12-01

Full Text Available AbstractBackground: Rodents are considered as reservoirs of various zoonotic diseases including helminthic infections. The current study aimed to evaluate the prevalence of helminth infections in rodents, in Boyer-Ahmad district, Southwestern Iran.Methods: Overall, 52 rodents were captured from various areas of the district by Sherman live traps. The animals were then euthanized and dissected. During necropsy, each organ was examined macroscopically for presence of any cyst or visible parasite. The gastrointestinal tract was removed and their contents were evaluated for larva or adult worms. Trichinella larvae in the rodents’ muscles were investigated by both digestion and pathological methods.Results: Twenty-eight (53.8% of the trapped rodents were male. The rodents were including 25 (48.1% Meriones persicus, 1(1.9% Calomyscus bailwardi, 1 (1.9% Arvicola terresterris, 7 (13.5% Rattus rattus, 8 (15.4% R. norvegicus, and 10 (19.2% Apodemus sylvaticus. Of them, 38 (73.0% were infected with at least one helminth. Collected rodents were infected with Hymenolepis diminuta (50%, Hymenolepis nana fraterna (28.8%, Skrjabinotaenia sp. (15.4%, Anoplocephalidae sp. (15.4%, Cysticercus fasciolaris (5.8%, Trichuris muris (36.5%, Aspiculuris tetraptera (15.4%, Syphacia sp. (5.7%, Rictularia sp. (15.4%, Trichostrongylus sp. (3.8%, and Gongylonema sp. (3.8%. M. persicus was the most (84% infected rodent, yet the differences between rodent genus and helminth infectivity were not statistically significant (P>0.05.Conclusion: The rodents in Boyer-Ahmad district are infected with different helminths infections that some of them are recognized as threat to human health.

Optimizing Cardiovascular Benefits of Exercise: A Review of Rodent Models

Science.gov (United States)

Davis, Brittany; Moriguchi, Takeshi; Sumpio, Bauer

2013-01-01

Although research unanimously maintains that exercise can ward off cardiovascular disease (CVD), the optimal type, duration, intensity, and combination of forms are yet not clear. In our review of existing rodent-based studies on exercise and cardiovascular health, we attempt to find the optimal forms, intensities, and durations of exercise. Using Scopus and Medline, a literature review of English language comparative journal studies of cardiovascular benefits and exercise was performed. This review examines the existing literature on rodent models of aerobic, anaerobic, and power exercise and compares the benefits of various training forms, intensities, and durations. The rodent studies reviewed in this article correlate with reports on human subjects that suggest regular aerobic exercise can improve cardiac and vascular structure and function, as well as lipid profiles, and reduce the risk of CVD. Findings demonstrate an abundance of rodent-based aerobic studies, but a lack of anaerobic and power forms of exercise, as well as comparisons of these three components of exercise. Thus, further studies must be conducted to determine a truly optimal regimen for cardiovascular health. PMID:24436579

Essentials of cloud computing

CERN Document Server

Chandrasekaran, K

2014-01-01

ForewordPrefaceComputing ParadigmsLearning ObjectivesPreambleHigh-Performance ComputingParallel ComputingDistributed ComputingCluster ComputingGrid ComputingCloud ComputingBiocomputingMobile ComputingQuantum ComputingOptical ComputingNanocomputingNetwork ComputingSummaryReview PointsReview QuestionsFurther ReadingCloud Computing FundamentalsLearning ObjectivesPreambleMotivation for Cloud ComputingThe Need for Cloud ComputingDefining Cloud ComputingNIST Definition of Cloud ComputingCloud Computing Is a ServiceCloud Computing Is a Platform5-4-3 Principles of Cloud computingFive Essential Charact

Microphysical and radiative effects of aerosols on warm clouds during the Amazon biomass burning season as observed by MODIS: impacts of water vapor and land cover

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J. E. Ten Hoeve

2011-04-01

aerosols and both CWV and clouds over varying land surface types is also analyzed. The study finds that the difference in CWV between forested and deforested land is not correlated with aerosol loading, supporting the assumption that temporal variation of CWV is primarily a function of the larger-scale meteorology. However, a difference in the response of CF to increasing AOD is observed between forested and deforested land. This suggests that dissimilarities between other meteorological factors, such as atmospheric stability, may have an impact on aerosol-cloud correlations between different land cover types.

Stress, social behavior, and resilience: Insights from rodents

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Beery, Annaliese K.; Kaufer, Daniela

2014-01-01

The neurobiology of stress and the neurobiology of social behavior are deeply intertwined. The social environment interacts with stress on almost every front: social interactions can be potent stressors; they can buffer the response to an external stressor; and social behavior often changes in response to stressful life experience. This review explores mechanistic and behavioral links between stress, anxiety, resilience, and social behavior in rodents, with particular attention to different social contexts. We consider variation between several different rodent species and make connections to research on humans and non-human primates. PMID:25562050

Research Note. Occurrence of gastrointestinal helminths in commensal rodents from Tabasco, Mexico

OpenAIRE

Cigarroa-Toledo N.; Santos-Martinez Y. De Los; Zaragoza-Vera C. V.; Garcia-Rodriguez M. M.; Baak-Baak C. M.; Machain-Williams C.; Garcia-Rejon J. E.; Panti-May J. A.; Torres-Chable O. M.

2017-01-01

The aim of this study was to determine the prevalence and species composition of helminths in commensal rodents captured inside private residences in the city of Villahermosa in Tabasco, Mexico. Trapping was performed at each house for three consecutive nights from October to December 2015. Fifty commensal rodents were captured: 23 Rattus norvegicus, 16 Mus musculus and 11 Rattus rattus. Rodents were transported alive to the laboratory and held in cages until they defecated. Feces were analyz...

CLOUD PARAMETERIZATIONS, CLOUD PHYSICS, AND THEIR CONNECTIONS: AN OVERVIEW

International Nuclear Information System (INIS)

LIU, Y.; DAUM, P.H.; CHAI, S.K.; LIU, F.

2002-01-01

This paper consists of three parts. The first part is concerned with the parameterization of cloud microphysics in climate models. We demonstrate the crucial importance of spectral dispersion of the cloud droplet size distribution in determining radiative properties of clouds (e.g., effective radius), and underline the necessity of specifying spectral dispersion in the parameterization of cloud microphysics. It is argued that the inclusion of spectral dispersion makes the issue of cloud parameterization essentially equivalent to that of the droplet size distribution function, bringing cloud parameterization to the forefront of cloud physics. The second part is concerned with theoretical investigations into the spectral shape of droplet size distributions in cloud physics. After briefly reviewing the mainstream theories (including entrainment and mixing theories, and stochastic theories), we discuss their deficiencies and the need for a paradigm shift from reductionist approaches to systems approaches. A systems theory that has recently been formulated by utilizing ideas from statistical physics and information theory is discussed, along with the major results derived from it. It is shown that the systems formalism not only easily explains many puzzles that have been frustrating the mainstream theories, but also reveals such new phenomena as scale-dependence of cloud droplet size distributions. The third part is concerned with the potential applications of the systems theory to the specification of spectral dispersion in terms of predictable variables and scale-dependence under different fluctuating environments

Foliar uptake of fog water and transport belowground alleviates drought effects in the cloud forest tree species, Drimys brasiliensis (Winteraceae).

Science.gov (United States)

Eller, Cleiton B; Lima, Aline L; Oliveira, Rafael S

2013-07-01

Foliar water uptake (FWU) is a common water acquisition mechanism for plants inhabiting temperate fog-affected ecosystems, but the prevalence and consequences of this process for the water and carbon balance of tropical cloud forest species are unknown. We performed a series of experiments under field and glasshouse conditions using a combination of methods (sap flow, fluorescent apoplastic tracers and stable isotopes) to trace fog water movement from foliage to belowground components of Drimys brasiliensis. In addition, we measured leaf water potential, leaf gas exchange, leaf water repellency and growth of plants under contrasting soil water availabilities and fog exposure in glasshouse experiments to evaluate FWU effects on the water and carbon balance of D. brasiliensis saplings. Fog water diffused directly through leaf cuticles and contributed up to 42% of total foliar water content. FWU caused reversals in sap flow in stems and roots of up to 26% of daily maximum transpiration. Fog water transported through the xylem reached belowground pools and enhanced leaf water potential, photosynthesis, stomatal conductance and growth relative to plants sheltered from fog. Foliar uptake of fog water is an important water acquisition mechanism that can mitigate the deleterious effects of soil water deficits for D. brasiliensis. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Comparison of food hoarding of two sympatric rodent species under interspecific competition.

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Zhang, Yi-Feng; Tong, Lei; Ji, Wei-Hong; Lu, Ji-Qi

2013-01-01

Competition can greatly affect the food hoarding strategies of rodents and the fate of seeds hoarded. In order to understand the influence of interspecific competition on food caching behavior of sympatric rodents, we investigated food hoarding patterns of two sympatric rodent species, buff-breasted rat (Rattus flavipectus) and Chinese white-bellied rat (Niviventor confucianus), and compared their responses and adjustment in hoarding behavior under interspecific competition. The results showed that: (1) the buff-breasted rat larder hoarded seeds only, while Chinese white-bellied rat hoarded seeds in both larder and scatter forms; (2) two species of rodents both larder hoarded more seeds when competitors were present; and (3) the Chinese white-bellied rats adjusted their seed hoarding from scatter to larder when competitors were introduced, which reduced the seed availability. Therefore, we concluded that rodents would adjust their food hoarding strategy when interspecific competitors were present, and this may produce a different effect on the fate of seeds and the recruitment of plants. This article is part of a Special Issue entitled: insert SI title. Copyright © 2012. Published by Elsevier B.V.

The analysis of size-segregated cloud condensation nuclei counter (CCNC data and its implications for cloud droplet activation

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M. Paramonov

2013-10-01

Full Text Available Ambient aerosol, CCN (cloud condensation nuclei and hygroscopic properties were measured with a size-segregated CCNC (cloud condensation nuclei counter in a boreal environment of southern Finland at the SMEAR (Station for Measuring Ecosystem-Atmosphere Relations II station. The instrumental setup operated at five levels of supersaturation S covering a range from 0.1–1% and measured particles with a size range of 20–300 nm; a total of 29 non-consecutive months of data are presented. The median critical diameter Dc ranged from 150 nm at S of 0.1% to 46 nm at S of 1.0%. The median aerosol hygroscopicity parameter κ ranged from 0.41 at S of 0.1% to 0.14 at S of 1.0%, indicating that ambient aerosol in Hyytiälä is less hygroscopic than the global continental or European continental averages. It is, however, more hygroscopic than the ambient aerosol in an Amazon rainforest, a European high Alpine site or a forested mountainous site. A fairly low hygroscopicity in Hyytiälä is likely a result of a large organic fraction present in the aerosol mass comparative to other locations within Europe. A considerable difference in particle hygroscopicity was found between particles smaller and larger than ~100 nm in diameter, possibly pointing out to the effect of cloud processing increasing κ of particles > 100 nm in diameter. The hygroscopicity of the smaller, ~50 nm particles did not change seasonally, whereas particles with a diameter of ~150 nm showed a decreased hygroscopicity in the summer, likely resulting from the increased VOC emissions of the surrounding boreal forest and secondary organic aerosol (SOA formation. For the most part, no diurnal patterns of aerosol hygroscopic properties were found. Exceptions to this were the weak diurnal patterns of small, ~50 nm particles in the spring and summer, when a peak in hygroscopicity around noon was observed. No difference in CCN activation and hygroscopic properties was found on days with or

Secure cloud computing

CERN Document Server

Jajodia, Sushil; Samarati, Pierangela; Singhal, Anoop; Swarup, Vipin; Wang, Cliff

2014-01-01

This book presents a range of cloud computing security challenges and promising solution paths. The first two chapters focus on practical considerations of cloud computing. In Chapter 1, Chandramouli, Iorga, and Chokani describe the evolution of cloud computing and the current state of practice, followed by the challenges of cryptographic key management in the cloud. In Chapter 2, Chen and Sion present a dollar cost model of cloud computing and explore the economic viability of cloud computing with and without security mechanisms involving cryptographic mechanisms. The next two chapters addres

Tick parasites of rodents in Romania: host preferences, community structure and geographical distribution.

Science.gov (United States)

Mihalca, Andrei D; Dumitrache, Mirabela O; Sándor, Attila D; Magdaş, Cristian; Oltean, Miruna; Györke, Adriana; Matei, Ioana A; Ionică, Angela; D'Amico, Gianluca; Cozma, Vasile; Gherman, Călin M

2012-11-21

Ticks are among the most important vectors of zoonotic diseases in temperate regions of Europe, with widespread distribution and high densities, posing an important medical risk. Most ticks feed on a variety of progressively larger hosts, with a large number of small mammal species typically harbouring primarily the immature stages. However, there are certain Ixodidae that characteristically attack micromammals also during their adult stage. Rodents are widespread hosts of ticks, important vectors and competent reservoirs of tick-borne pathogens. Micromammal-tick associations have been poorly studied in Romania, and our manuscript shows the results of a large scale study on tick infestation epidemiology in rodents from Romania. Rodents were caught using snap-traps in a variety of habitats in Romania, between May 2010 and November 2011. Ticks were individually collected from these rodents and identified to species and development stage. Frequency, mean intensity, prevalence and its 95% confidence intervals were calculated using the EpiInfo 2000 software. A p value of Romania for the presence of ticks. Each collected tick was identified to species level and the following epidemiological parameters were calculated: prevalence, mean intensity and mean abundance. The total number of ticks collected from rodents was 483, with eight species identified: Ixodes ricinus, I. redikorzevi, I. apronophorus, I. trianguliceps, I. laguri, Dermacentor marginatus, Rhipicephalus sanguineus and Haemaphysalis sulcata. The overall prevalence of tick infestation was 29.55%, with a mean intensity of 3.86 and a mean abundance of 1.14. Only two polyspecific infestations were found: I. ricinus + I. redikorzevi and I. ricinus + D. marginatus. Our study showed a relatively high diversity of ticks parasitizing rodents in Romania. The most common tick in rodents was I. ricinus, followed by I. redikorzevi. Certain rodents seem to host a significantly higher number of tick species than others, the

The need to implement the landscape of fear within rodent pest management strategies.

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Krijger, Inge M; Belmain, Steven R; Singleton, Grant R; Groot Koerkamp, Peter Wg; Meerburg, Bastiaan G

2017-12-01

Current reactive pest management methods have serious drawbacks such as the heavy reliance on chemicals, emerging genetic rodenticide resistance and high secondary exposure risks. Rodent control needs to be based on pest species ecology and ethology to facilitate the development of ecologically based rodent management (EBRM). An important aspect of EBRM is a strong understanding of rodent pest species ecology, behaviour and spatiotemporal factors. Gaining insight into the behaviour of pest species is a key aspect of EBRM. The landscape of fear (LOF) is a mapping of the spatial variation in the foraging cost arising from the risk of predation, and reflects the levels of fear a prey species perceives at different locations within its home range. In practice, the LOF maps habitat use as a result of perceived fear, which shows where bait or traps are most likely to be encountered and used by rodents. Several studies have linked perceived predation risk of foraging animals with quitting-harvest rates or giving-up densities (GUDs). GUDs have been used to reflect foraging behaviour strategies of predator avoidance, but to our knowledge very few papers have directly used GUDs in relation to pest management strategies. An opportunity for rodent control strategies lies in the integration of the LOF of rodents in EBRM methodologies. Rodent management could be more efficient and effective by concentrating on those areas where rodents perceive the least levels of predation risk. © 2017 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry. © 2017 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.

Comparison of Cloud Properties from CALIPSO-CloudSat and Geostationary Satellite Data

Science.gov (United States)

Nguyen, L.; Minnis, P.; Chang, F.; Winker, D.; Sun-Mack, S.; Spangenberg, D.; Austin, R.

2007-01-01

Cloud properties are being derived in near-real time from geostationary satellite imager data for a variety of weather and climate applications and research. Assessment of the uncertainties in each of the derived cloud parameters is essential for confident use of the products. Determination of cloud amount, cloud top height, and cloud layering is especially important for using these real -time products for applications such as aircraft icing condition diagnosis and numerical weather prediction model assimilation. Furthermore, the distribution of clouds as a function of altitude has become a central component of efforts to evaluate climate model cloud simulations. Validation of those parameters has been difficult except over limited areas where ground-based active sensors, such as cloud radars or lidars, have been available on a regular basis. Retrievals of cloud properties are sensitive to the surface background, time of day, and the clouds themselves. Thus, it is essential to assess the geostationary satellite retrievals over a variety of locations. The availability of cloud radar data from CloudSat and lidar data from CALIPSO make it possible to perform those assessments over each geostationary domain at 0130 and 1330 LT. In this paper, CloudSat and CALIPSO data are matched with contemporaneous Geostationary Operational Environmental Satellite (GOES), Multi-functional Transport Satellite (MTSAT), and Meteosat-8 data. Unlike comparisons with cloud products derived from A-Train imagers, this study considers comparisons of nadir active sensor data with off-nadir retrievals. These matched data are used to determine the uncertainties in cloud-top heights and cloud amounts derived from the geostationary satellite data using the Clouds and the Earth s Radiant Energy System (CERES) cloud retrieval algorithms. The CERES multi-layer cloud detection method is also evaluated to determine its accuracy and limitations in the off-nadir mode. The results will be useful for

Neurogenetics of aggressive behavior: studies in rodents.

Science.gov (United States)

Takahashi, Aki; Miczek, Klaus A

2014-01-01

Aggressive behavior is observed in many animal species, such as insects, fish, lizards, frogs, and most mammals including humans. This wide range of conservation underscores the importance of aggressive behavior in the animals' survival and fitness, and the likely heritability of this behavior. Although typical patterns of aggressive behavior differ between species, there are several concordances in the neurobiology of aggression among rodents, primates, and humans. Studies with rodent models may eventually help us to understand the neurogenetic architecture of aggression in humans. However, it is important to recognize the difference between the ecological and ethological significance of aggressive behavior (species-typical aggression) and maladaptive violence (escalated aggression) when applying the findings of aggression research using animal models to human or veterinary medicine. Well-studied rodent models for aggressive behavior in the laboratory setting include the mouse (Mus musculus), rat (Rattus norvegicus), hamster (Mesocricetus auratus), and prairie vole (Microtus ochrogaster). The neural circuits of rodent aggression have been gradually elucidated by several techniques, e.g., immunohistochemistry of immediate-early gene (c-Fos) expression, intracranial drug microinjection, in vivo microdialysis, and optogenetics techniques. Also, evidence accumulated from the analysis of gene-knockout mice shows the involvement of several genes in aggression. Here, we review the brain circuits that have been implicated in aggression, such as the hypothalamus, prefrontal cortex (PFC), dorsal raphe nucleus (DRN), nucleus accumbens (NAc), and olfactory system. We then discuss the roles of glutamate and γ-aminobutyric acid (GABA), excitatory and inhibitory amino acids in the brain, as well as their receptors, in controlling aggressive behavior, focusing mainly on recent findings. At the end of this chapter, we discuss how genes can be identified that underlie individual

Feeding Patterns of Mosquitoes (Diptera: Culicidae) in the Atlantic Forest, Rio de Janeiro, Brazil.

Science.gov (United States)

Alencar, Jeronimo; Mello, Cecília Ferreira de; Gil-Santana, Hélcio R; Giupponi, Alessandro Ponce de Leão; Araújo, Andressa Nunes; Lorosa, Elias Seixas; Guimarães, Anthony Érico; Silva, Júlia Dos Santos

2015-09-01

The stomach contents of culicids from the Atlantic Forest in Rio de Janeiro state, Brazil, were analyzed using the precipitin technique to evaluate the feeding patterns of the species. Sampling was performed from February 2012 to December 2013, using CO2-baited Centers for Disease Control and Prevention traps to catch mosquitoes from 15 00 to 07 00 hours. The following antisera were used: bird, rodent, opossum, human, horse, capybara, lizard, and frog. Of the 325 adult bloodfed females caught and analyzed, 273 (84.0%) reacted in the precipitin test. The percentage of specimens with a positive reaction to a single antiserum included bird (39.2%), rodent (22.5%), opossum (13.2%), capybara (6.6%), horse (5.7%), frog (6.2%), human (4.0%), and lizard (2.6%). The specimens that reacted positively against more than one blood source (46) most frequently presented the following combinations: bird + rodent and bird + frog (17.4%), followed by bird + human (13.0%). The predominance of positive results for birds suggested that the avian-rich environment might have influenced the feeding behavior of the culicids. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Role of orbital dynamics and cloud-cloud collisions in the formation of giant molecular clouds in global spiral structures

International Nuclear Information System (INIS)

Roberts, W.W. Jr.; Stewart, G.R.

1987-01-01

The role of orbit crowding and cloud-cloud collisions in the formation of GMCs and their organization in global spiral structure is investigated. Both N-body simulations of the cloud system and a detailed analysis of individual particle orbits are used to develop a conceptual understanding of how individual clouds participate in the collective density response. Detailed comparisons are made between a representative cloud-particle simulation in which the cloud particles collide inelastically with one another and give birth to and subsequently interact with young star associations and stripped down simulations in which the cloud particles are allowed to follow ballistic orbits in the absence of cloud-cloud collisions or any star formation processes. Orbit crowding is then related to the behavior of individual particle trajectories in the galactic potential field. The conceptual picture of how GMCs are formed in the clumpy ISMs of spiral galaxies is formulated, and the results are compared in detail with those published by other authors. 68 references

CLOUD COMPUTING SECURITY

Directory of Open Access Journals (Sweden)

Ştefan IOVAN

2016-05-01

Full Text Available Cloud computing reprentes the software applications offered as a service online, but also the software and hardware components from the data center.In the case of wide offerd services for any type of client, we are dealing with a public cloud. In the other case, in wich a cloud is exclusively available for an organization and is not available to the open public, this is consider a private cloud [1]. There is also a third type, called hibrid in which case an user or an organization might use both services available in the public and private cloud. One of the main challenges of cloud computing are to build the trust and ofer information privacy in every aspect of service offerd by cloud computingle. The variety of existing standards, just like the lack of clarity in sustenability certificationis not a real help in building trust. Also appear some questions marks regarding the efficiency of traditionsecurity means that are applied in the cloud domain. Beside the economic and technology advantages offered by cloud, also are some advantages in security area if the information is migrated to cloud. Shared resources available in cloud includes the survey, use of the "best practices" and technology for advance security level, above all the solutions offered by the majority of medium and small businesses, big companies and even some guvermental organizations [2].

The valproic acid-induced rodent model of autism.

Science.gov (United States)

Nicolini, Chiara; Fahnestock, Margaret

2018-01-01

Autism is a lifelong neurodevelopmental disorder characterized by impairments in social communication and interaction and by repetitive patterns of behavior, interests and activities. While autism has a strong genetic component, environmental factors including toxins, pesticides, infection and drugs are known to confer autism susceptibility, likely by inducing epigenetic changes. In particular, exposure to valproic acid (VPA) during pregnancy has been demonstrated to increase the risk of autism in children. Furthermore, rodents prenatally exposed to this drug display behavioral phenotypes characteristics of the human condition. Indeed, in utero exposure of rodents to VPA represents a robust model of autism exhibiting face, construct and predictive validity. This model might better represent the many cases of idiopathic autism which are of environmental/epigenetic origins than do transgenic models carrying mutations in single autism-associated genes. The VPA model provides a valuable tool to investigate the neurobiology underlying autistic behavior and to screen for novel therapeutics. Here we review the VPA-induced rodent model of autism, highlighting its importance and reliability as an environmentally-induced animal model of autism. Copyright © 2017 Elsevier Inc. All rights reserved.

Formation of massive, dense cores by cloud-cloud collisions

Science.gov (United States)

Takahira, Ken; Shima, Kazuhiro; Habe, Asao; Tasker, Elizabeth J.

2018-05-01

We performed sub-parsec (˜ 0.014 pc) scale simulations of cloud-cloud collisions of two idealized turbulent molecular clouds (MCs) with different masses in the range of (0.76-2.67) × 104 M_{⊙} and with collision speeds of 5-30 km s-1. Those parameters are larger than in Takahira, Tasker, and Habe (2014, ApJ, 792, 63), in which study the colliding system showed a partial gaseous arc morphology that supports the NANTEN observations of objects indicated to be colliding MCs using numerical simulations. Gas clumps with density greater than 10-20 g cm-3 were identified as pre-stellar cores and tracked through the simulation to investigate the effects of the mass of colliding clouds and the collision speeds on the resulting core population. Our results demonstrate that the smaller cloud property is more important for the results of cloud-cloud collisions. The mass function of formed cores can be approximated by a power-law relation with an index γ = -1.6 in slower cloud-cloud collisions (v ˜ 5 km s-1), and is in good agreement with observation of MCs. A faster relative speed increases the number of cores formed in the early stage of collisions and shortens the gas accretion phase of cores in the shocked region, leading to the suppression of core growth. The bending point appears in the high-mass part of the core mass function and the bending point mass decreases with increase in collision speed for the same combination of colliding clouds. The higher-mass part of the core mass function than the bending point mass can be approximated by a power law with γ = -2-3 that is similar to the power index of the massive part of the observed stellar initial mass function. We discuss implications of our results for the massive-star formation in our Galaxy.

Guide to Commensal Rodent Control

Science.gov (United States)

1991-12-01

in many detergents also fluoresce. For positive identification, place the suspect material on Urease Siom lhymol Blue test paper, moisten with water...are applied in a thin layer in protected rat and mouse r’unways, baitboxes, or tubes along walls. The powder is picked up by the rodents on their feet

Chemical constituents in clouds and rainwater in the Puerto Rican rainforest: potential sources and seasonal drivers

Science.gov (United States)

A. Gioda; O.L. Mayol-Bracero; F. N. Scatena; K. C. Weathers; V. L. Mateus; W. H. McDowell

2013-01-01

Cloud- and rain-water samples collected between 1984 and 2007 in the Luquillo Experimental Forest, Puerto Rico, were analyzed in order to understand the main processes and sources that control their chemistry. Three sites were used: El Verde Field Station (380 m asl), Bisley (361 m asl), and East Peak (1051 m asl). Bulk rainwater samples were collected from all sites,...

Occurrence and distribution of Giardia species in wild rodents in Germany.

Science.gov (United States)

Helmy, Yosra A; Spierling, Nastasja G; Schmidt, Sabrina; Rosenfeld, Ulrike M; Reil, Daniela; Imholt, Christian; Jacob, Jens; Ulrich, Rainer G; Aebischer, Toni; Klotz, Christian

2018-03-27

Giardiasis is an important gastrointestinal parasitic disease in humans and other mammals caused by the protozoan Giardia duodenalis. This species complex is represented by genetically distinct groups (assemblages A-H) with varying zoonotic potential and host preferences. Wild rodents can harbor potentially zoonotic assemblages A and B, and the rodent-specific assemblage G. Other Giardia spp. found in these animals are Giardia muris and Giardia microti. For the latter, only limited information on genetic typing is available. It has been speculated that wild rodents might represent an important reservoir for parasites causing human giardiasis. The aim of this study was to investigate the occurrence and distribution of Giardia spp. and assemblage types in wild rodents from different study sites in Germany. Screening of 577 wild rodents of the genera Apodemus, Microtus and Myodes, sampled at eleven study sites in Germany, revealed a high overall Giardia prevalence. Giardia species determination at the SSU rDNA gene locus revealed that Apodemus mice, depending on species, were predominantly infected with one of two distinct G. muris sequence types. Giardia microti was the predominant parasite species found in voles of the genera Microtus and Myodes. Only a few animals were positive for potentially zoonotic G. duodenalis. Subtyping at the beta-giardin (bg) and glutamine dehydrogenase (gdh) genes strongly supported the existence of different phylogenetic subgroups of G. microti that are preferentially harbored by distinct host species. The present study highlights the preference of G. muris for Apodemus, and G. microti for Microtus and Myodes hosts and argues for a very low prevalence of zoonotic G. duodenalis assemblages in wild rodents in Germany. It also provides evidence that G. muris and G. microti subdivide into several phylogenetically distinguishable subgroups, each of which appears to be preferentially harbored by species of a particular rodent host genus

Description of Leishmania (Leishmania forattinii sp. n., a new parasite infecting opossums and rodents in Brazil

Directory of Open Access Journals (Sweden)

Elizaide L. A. Yoshida

1993-09-01

Full Text Available A new parasite species of Leishmania is described, L. (Leishmania forattinii sp. n., which was isolated from a pooled triturate of liver and spleen of a opossum (Didelphis marsupialis aurita and from skin samples from a rodent (Proechmys iheringi denigratus, captured in primary forest on the Atlantic Cost of Brazil. Our results on the basis of biological and molecular criteria indicate that this taxonomically distinct parasite ias a new species of the L. mexicana complex, but closely related to L. (L. aristidesi Laison & shaw, 1979, as revelated by phenetic and phylogenetic numerical analyses of the enzyme data. L. forattinii was clearly distinguishable from other Leishmania species of the genus usisng enzyme electrophoresis, monoclonal antibodies, molecular karyotypes, analysis of restriction enzyme digestion patterns of kinetoplast DNA (kDNA, as well as the use of kDNA hybridization procedures.

The bioeconomics of controlling an African rodent pest species

OpenAIRE

Skonhoft, Anders; Herwig, Leirs; Andreassen, Harry Peter; Mulungu, Loth S. A.; Stenseth, Nils Christian

2006-01-01

The paper treats the economy of controlling an African pest rodent, the multimammate rat, causing major damage in maize production. An ecological population model is presented and used as a basis for the economic analyses carried out at the village level using data from Tanzania. This model incorporates both density-dependent and density-independent (stochastic) factors. Rodents are controlled by applying poison, and the economic benefits depend on the income from maize production minus the c...

Cloud Collaboration: Cloud-Based Instruction for Business Writing Class

Science.gov (United States)

Lin, Charlie; Yu, Wei-Chieh Wayne; Wang, Jenny

2014-01-01

Cloud computing technologies, such as Google Docs, Adobe Creative Cloud, Dropbox, and Microsoft Windows Live, have become increasingly appreciated to the next generation digital learning tools. Cloud computing technologies encourage students' active engagement, collaboration, and participation in their learning, facilitate group work, and support…

Domestic cats and dogs create a landscape of fear for pest rodents around rural homesteads.

Directory of Open Access Journals (Sweden)

Themb'alilahlwa A M Mahlaba

Full Text Available Using domestic predators such as cats to control rodent pest problems around farms and homesteads is common across the world. However, practical scientific evidence on the impact of such biological control in agricultural settings is often lacking. We tested whether the presence of domestic cats and/or dogs in rural homesteads would affect the foraging behaviour of pest rodents. We estimated giving up densities (GUDs from established feeding patches and estimated relative rodent activity using tracking tiles at 40 homesteads across four agricultural communities. We found that the presence of cats and dogs at the same homestead significantly reduced activity and increased GUDs (i.e. increased perception of foraging cost of pest rodent species. However, if only cats or dogs alone were present at the homestead there was no observed difference in rodent foraging activity in comparison to homesteads with no cats or dogs. Our results suggest that pest rodent activity can be discouraged through the presence of domestic predators. When different types of predator are present together they likely create a heightened landscape of fear for foraging rodents.

Contribution of National near Real Time MODIS Forest Maximum Percentage NDVI Change Products to the U.S. ForWarn System

Science.gov (United States)

Spruce, Joseph P.; Hargrove, William; Gasser, Gerald; Smoot, James; Kuper, Philip D.

2012-01-01

This presentation reviews the development, integration, and testing of Near Real Time (NRT) MODIS forest % maximum NDVI change products resident to the USDA Forest Service (USFS) ForWarn System. ForWarn is an Early Warning System (EWS) tool for detection and tracking of regionally evident forest change, which includes the U.S. Forest Change Assessment Viewer (FCAV) (a publically available on-line geospatial data viewer for visualizing and assessing the context of this apparent forest change). NASA Stennis Space Center (SSC) is working collaboratively with the USFS, ORNL, and USGS to contribute MODIS forest change products to ForWarn. These change products compare current NDVI derived from expedited eMODIS data, to historical NDVI products derived from MODIS MOD13 data. A new suite of forest change products are computed every 8 days and posted to the ForWarn system; this includes three different forest change products computed using three different historical baselines: 1) previous year; 2) previous three years; and 3) all previous years in the MODIS record going back to 2000. The change product inputs are maximum value NDVI that are composited across a 24 day interval and refreshed every 8 days so that resulting images for the conterminous U.S. are predominantly cloud-free yet still retain temporally relevant fresh information on changes in forest canopy greenness. These forest change products are computed at the native nominal resolution of the input reflectance bands at 231.66 meters, which equates to approx 5.4 hectares or 13.3 acres per pixel. The Time Series Product Tool, a MATLAB-based software package developed at NASA SSC, is used to temporally process, fuse, reduce noise, interpolate data voids, and re-aggregate the historical NDVI into 24 day composites, and then custom MATLAB scripts are used to temporally process the eMODIS NDVIs so that they are in synch with the historical NDVI products. Prior to posting, an in-house snow mask classification product

Protozoan Parasites of Rodents and Their Zoonotic Significance in Boyer-Ahmad District, Southwestern Iran

Directory of Open Access Journals (Sweden)

Zeinab Seifollahi

2016-01-01

Full Text Available Backgrounds. Wild rodents are reservoirs of various zoonotic diseases, such as toxoplasmosis, babesiosis, and leishmaniasis. The current study aimed to assess the protozoan infection of rodents in Boyer-Ahmad district, southwestern Iran. Materials and Methods. A total of 52 rodents were collected from different parts of Boyer-Ahmad district, in Kohgiluyeh and Boyer-Ahmad province, using Sherman live traps. Each rodent was anesthetized with ether, according to the ethics of working with animals, and was dissected. Samples were taken from various tissues and stool samples were collected from the contents of the colon and small intestines. Moreover, 2 to 5 mL of blood was taken from each of the rodents and the sera were examined for anti-Leishmania antibodies, by ELISA, or anti-T. gondii antibodies, by modified agglutination test (MAT. DNA was extracted from brain tissue samples of each rodent and PCR was used to identify the DNA of T. gondii. Results. Of the 52 stool samples of rodents studied by parasitological methods, intestinal protozoa infection was seen in 28 cases (53.8%. From 52 rodents, 19 (36.5% were infected with Trichomonas, 10 (19.2% with Giardia muris, and 11 (21.2% with Entamoeba spp. Also, 10 cases (19.2% were infected with Blastocystis, 3 (5.8% were infected with Chilomastix, 7 (13.5% were infected with Endolimax, 1 (1.9% was infected with Retortamonas, 3 (5.77% were infected with T. gondii, and 6 (11.54% were infected with Trypanosoma lewisi. Antibodies to T. gondii were detected in the sera of 5 (9.61% cases. Results of the molecular study showed T. gondii infection in 3 (5.77% of the rodents. Findings of this study showed that rodents in Kohgiluyeh and Boyer-Ahmad province, southwestern Iran, are infected with several blood and intestinal parasites; some of them might be potential risks to residents and domestic animals in the region.

Population response of rodents to control with rodenticides

Directory of Open Access Journals (Sweden)

A.V. TCHABOVSKY

2009-04-01

Full Text Available We summarize theoretical approaches and practice of rodent pest control in Russia and former USSR during last 50 years. We review literature as well as original data to understand mechanisms of rodent populations recovery after chemical control campaigns in urban areas, agricultural lands and natural foci of plague. Laboratory and field experiments indicate that inherent individual variation in behavioural, physiological and life-history traits provides survival of heterogeneous mix of individuals in residual population with increased resistance to poisonous baits and high reproductive potential that leads to fast recovery of a population. In a series of field experiments with various rodent and lagomorph species (Mus musculus, Rattus norvegicus, Meriones unguiculatus, M.meridianus, M.tamariscinus, Ochotona pallasii we have shown that patterns of recolonization of depopulated area and mechanisms of population recovery vary among species and depend on species-specific social organization. After control territorial and group-living species demonstrated an increase in mobility and affiliative and marking behaviour and a decrease in intraspecific aggression. The rate of recolonization of treated areas was high due to redistribution of survived individuals and immigration by neighbors. Population recovered to original level due to increased breeding performance and fecundity of both survived residents and immigrants. In contrast, socially-independent species exhibited minor changes in behaviour. Recolonization was mainly due to better survival and recruitment of youngs, so the rate of recolonization was low. Species-specificity of behavioural compensation mechanisms to control should be considered when developing ecologically based rodent management strategies.

an ecological study on rodents of natural vegetation and farm lands ...

African Journals Online (AJOL)

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habitat association of rodents was conducted in Siltie natural vegetation and nearby farmlands ... In each habitat type, one representative grid was selected for live trapping. In addition, rodents were also snap- trapped from these habitats. A total of 562 captures was made .... into seeds, leaves, roots, earthworms and arthro-.

Comparison Between CCCM and CloudSat Radar-Lidar (RL) Cloud and Radiation Products

Science.gov (United States)

Ham, Seung-Hee; Kato, Seiji; Rose, Fred G.; Sun-Mack, Sunny

2015-01-01

To enhance cloud properties, LaRC and CIRA developed each combination algorithm for obtained properties from passive, active and imager in A-satellite constellation. When comparing global cloud fraction each other, LaRC-produced CERES-CALIPSO-CloudSat-MODIS (CCCM) products larger low-level cloud fraction over tropic ocean, while CIRA-produced Radar-Lidar (RL) shows larger mid-level cloud fraction for high latitude region. The reason for different low-level cloud fraction is due to different filtering method of lidar-detected cloud layers. Meanwhile difference in mid-level clouds is occurred due to different priority of cloud boundaries from lidar and radar.

Continuous growth of cloud droplets in cumulus cloud

International Nuclear Information System (INIS)

Gotoh, Toshiyuki; Suehiro, Tamotsu; Saito, Izumi

2016-01-01

A new method to seamlessly simulate the continuous growth of droplets advected by turbulent flow inside a cumulus cloud was developed from first principle. A cubic box ascending with a mean updraft inside a cumulus cloud was introduced and the updraft velocity was self-consistently determined in such a way that the mean turbulent velocity within the box vanished. All the degrees of freedom of the cloud droplets and turbulence fields were numerically integrated. The box ascended quickly inside the cumulus cloud due to the updraft and the mean radius of the droplets grew from 10 to 24 μ m for about 10 min. The turbulent flow tended to slow down the time evolutions of the updraft velocity, the box altitude and the mean cloud droplet radius. The size distribution of the cloud droplets in the updraft case was narrower than in the absence of the updraft. It was also found that the wavenumeber spectra of the variances of the temperature and water vapor mixing ratio were nearly constant in the low wavenumber range. The future development of the new method was argued. (paper)

Spatio-temporal Change Patterns of Tropical Forests from 2000 to 2014 Using MOD09A1 Dataset

Science.gov (United States)

Qin, Y.; Xiao, X.; Dong, J.

2016-12-01

Large-scale deforestation and forest degradation in the tropical region have resulted in extensive carbon emissions and biodiversity loss. However, restricted by the availability of good-quality observations, large uncertainty exists in mapping the spatial distribution of forests and their spatio-temporal changes. In this study, we proposed a pixel- and phenology-based algorithm to identify and map annual tropical forests from 2000 to 2014, using the 8-day, 500-m MOD09A1 (v005) product, under the support of Google cloud computing (Google Earth Engine). A temporal filter was applied to reduce the random noises and to identify the spatio-temporal changes of forests. We then built up a confusion matrix and assessed the accuracy of the annual forest maps based on the ground reference interpreted from high spatial resolution images in Google Earth. The resultant forest maps showed the consistent forest/non-forest, forest loss, and forest gain in the pan-tropical zone during 2000 - 2014. The proposed algorithm showed the potential for tropical forest mapping and the resultant forest maps are important for the estimation of carbon emission and biodiversity loss.

Small rodents as paratenic or intermediate hosts of carnivore parasites in Berlin, Germany.

Science.gov (United States)

Krücken, Jürgen; Blümke, Julia; Maaz, Denny; Demeler, Janina; Ramünke, Sabrina; Antolová, Daniela; Schaper, Roland; von Samson-Himmelstjerna, Georg

2017-01-01

Rodents are important intermediate and paratenic hosts for carnivore parasites, including the important zoonotic agents Toxoplasma, Echinococcus and Toxocara. Monitoring of such parasites in rodents can be used to detect increasing risks for human and veterinary public health. Rodents were trapped at four sites in Berlin, two near the city center, two at the periphery. PCRs were conducted to detect Coccidia (target ITS-1) and specifically Toxoplasma gondii (repetitive element) in brain and ascarids (ITS-2) in muscle or brain tissue. During necropsies, metacestodes were collected and identified using ITS-2 and 12S rRNA PCRs. An ELISA to detect antibodies against Toxocara canis ES antigens was performed. Within the 257 examined rodents, the most frequently observed parasite was Frenkelia glareoli predominantly found in Myodes glareolus. T. gondii was only detected in 12 rodents and Microtus spp. (although strongly underrepresented) had a significantly increased chance of being positive. Neither Echinococcus nor typical Taenia parasites of dogs and cats were found but Mesocestoides litteratus and Taenia martis metacestodes were identified which can cause severe peritoneal or ocular cysticercosis in dogs, primates and humans. Using PCR, the ascarids T. canis (n = 8), Toxocara cati (4) and Parascaris sp. (1) were detected predominantly in muscles. Seroprevalence of T. canis was 14.2% and ELISA was thus more sensitive than PCR to detect infection with this parasite. Non-parametric multidimensional scaling and cluster analysis revealed that parasite communities could be grouped into an urban and a peri-urban cluster with high frequency of ascarid-positive rodents in urban and high frequency of F. glareoli in peri-urban sites. Prevalence rates of parasites in rodents with potential impact for human or veterinary public health are considerable and the monitoring of transmission cycles of carnivore parasites in intermediate rodent hosts is recommended to estimate the health

Small rodents as paratenic or intermediate hosts of carnivore parasites in Berlin, Germany.

Directory of Open Access Journals (Sweden)

Jürgen Krücken

Full Text Available Rodents are important intermediate and paratenic hosts for carnivore parasites, including the important zoonotic agents Toxoplasma, Echinococcus and Toxocara. Monitoring of such parasites in rodents can be used to detect increasing risks for human and veterinary public health. Rodents were trapped at four sites in Berlin, two near the city center, two at the periphery. PCRs were conducted to detect Coccidia (target ITS-1 and specifically Toxoplasma gondii (repetitive element in brain and ascarids (ITS-2 in muscle or brain tissue. During necropsies, metacestodes were collected and identified using ITS-2 and 12S rRNA PCRs. An ELISA to detect antibodies against Toxocara canis ES antigens was performed. Within the 257 examined rodents, the most frequently observed parasite was Frenkelia glareoli predominantly found in Myodes glareolus. T. gondii was only detected in 12 rodents and Microtus spp. (although strongly underrepresented had a significantly increased chance of being positive. Neither Echinococcus nor typical Taenia parasites of dogs and cats were found but Mesocestoides litteratus and Taenia martis metacestodes were identified which can cause severe peritoneal or ocular cysticercosis in dogs, primates and humans. Using PCR, the ascarids T. canis (n = 8, Toxocara cati (4 and Parascaris sp. (1 were detected predominantly in muscles. Seroprevalence of T. canis was 14.2% and ELISA was thus more sensitive than PCR to detect infection with this parasite. Non-parametric multidimensional scaling and cluster analysis revealed that parasite communities could be grouped into an urban and a peri-urban cluster with high frequency of ascarid-positive rodents in urban and high frequency of F. glareoli in peri-urban sites. Prevalence rates of parasites in rodents with potential impact for human or veterinary public health are considerable and the monitoring of transmission cycles of carnivore parasites in intermediate rodent hosts is recommended to

Hidden in the Clouds: New Ideas in Cloud Computing

CERN Multimedia

CERN. Geneva

2013-01-01

Abstract: Cloud computing has become a hot topic. But 'cloud' is no newer in 2013 than MapReduce was in 2005: We've been doing both for years. So why is cloud more relevant today than it ever has been? In this presentation, we will introduce the (current) central thesis of cloud computing, and explore how and why (or even whether) the concept has evolved. While we will cover a little light background, our primary focus will be on the consequences, corollaries and techniques introduced by some of the leading cloud developers and organizations. We each have a different deployment model, different applications and workloads, and many of us are still learning to efficiently exploit the platform services offered by a modern implementation. The discussion will offer the opportunity to share these experiences and help us all to realize the benefits of cloud computing to the fullest degree. Please bring questions and opinions, and be ready to share both!   Bio: S...

Cloud Computing

CERN Document Server

Antonopoulos, Nick

2010-01-01

Cloud computing has recently emerged as a subject of substantial industrial and academic interest, though its meaning and scope is hotly debated. For some researchers, clouds are a natural evolution towards the full commercialisation of grid systems, while others dismiss the term as a mere re-branding of existing pay-per-use technologies. From either perspective, 'cloud' is now the label of choice for accountable pay-per-use access to third party applications and computational resources on a massive scale. Clouds support patterns of less predictable resource use for applications and services a

The CLOUD experiment

CERN Multimedia

Maximilien Brice

2006-01-01

The Cosmics Leaving Outdoor Droplets (CLOUD) experiment as shown by Jasper Kirkby (spokesperson). Kirkby shows a sketch to illustrate the possible link between galactic cosmic rays and cloud formations. The CLOUD experiment uses beams from the PS accelerator at CERN to simulate the effect of cosmic rays on cloud formations in the Earth's atmosphere. It is thought that cosmic ray intensity is linked to the amount of low cloud cover due to the formation of aerosols, which induce condensation.

Clouds of Venus

Energy Technology Data Exchange (ETDEWEB)

Knollenberg, R G [Particle Measuring Systems, Inc., 1855 South 57th Court, Boulder, Colorado 80301, U.S.A.; Hansen, J [National Aeronautics and Space Administration, New York (USA). Goddard Inst. for Space Studies; Ragent, B [National Aeronautics and Space Administration, Moffett Field, Calif. (USA). Ames Research Center; Martonchik, J [Jet Propulsion Lab., Pasadena, Calif. (USA); Tomasko, M [Arizona Univ., Tucson (USA)

1977-05-01

The current state of knowledge of the Venusian clouds is reviewed. The visible clouds of Venus are shown to be quite similar to low level terrestrial hazes of strong anthropogenic influence. Possible nucleation and particle growth mechanisms are presented. The Pioneer Venus experiments that emphasize cloud measurements are described and their expected findings are discussed in detail. The results of these experiments should define the cloud particle composition, microphysics, thermal and radiative heat budget, rough dynamical features and horizontal and vertical variations in these and other parameters. This information should be sufficient to initialize cloud models which can be used to explain the cloud formation, decay, and particle life cycle.

ASTER cloud coverage reassessment using MODIS cloud mask products

Science.gov (United States)

Tonooka, Hideyuki; Omagari, Kunjuro; Yamamoto, Hirokazu; Tachikawa, Tetsushi; Fujita, Masaru; Paitaer, Zaoreguli

2010-10-01

In the Advanced Spaceborne Thermal Emission and Reflection radiometer (ASTER) Project, two kinds of algorithms are used for cloud assessment in Level-1 processing. The first algorithm based on the LANDSAT-5 TM Automatic Cloud Cover Assessment (ACCA) algorithm is used for a part of daytime scenes observed with only VNIR bands and all nighttime scenes, and the second algorithm based on the LANDSAT-7 ETM+ ACCA algorithm is used for most of daytime scenes observed with all spectral bands. However, the first algorithm does not work well for lack of some spectral bands sensitive to cloud detection, and the two algorithms have been less accurate over snow/ice covered areas since April 2008 when the SWIR subsystem developed troubles. In addition, they perform less well for some combinations of surface type and sun elevation angle. We, therefore, have developed the ASTER cloud coverage reassessment system using MODIS cloud mask (MOD35) products, and have reassessed cloud coverage for all ASTER archived scenes (>1.7 million scenes). All of the new cloud coverage data are included in Image Management System (IMS) databases of the ASTER Ground Data System (GDS) and NASA's Land Process Data Active Archive Center (LP DAAC) and used for ASTER product search by users, and cloud mask images are distributed to users through Internet. Daily upcoming scenes (about 400 scenes per day) are reassessed and inserted into the IMS databases in 5 to 7 days after each scene observation date. Some validation studies for the new cloud coverage data and some mission-related analyses using those data are also demonstrated in the present paper.

Prevalence and genetic diversity of Bartonella strains in rodents from northwestern Mexico.

Science.gov (United States)

Rubio, André V; Ávila-Flores, Rafael; Osikowicz, Lynn M; Bai, Ying; Suzán, Gerardo; Kosoy, Michael Y

2014-12-01

Bartonella infections were investigated in wild rodents from northwestern Chihuahua, Mexico. A total of 489 rodents belonging to 14 species were surveyed in four areas. Bartonella bacteria were cultured from 50.1% of rodent samples (245/489). Infection rates ranged from 0% to 83.3% per rodent species, with no significant difference between sites except for Cynomys ludovicianus. Phylogenetic analyses of the citrate synthase gene (gltA) of the Bartonella isolates revealed 23 genetic variants (15 novel and 8 previously described), clustering into five phylogroups. Three phylogroups were associated with Bartonella vinsonii subsp. vinsonii, B. vinsonii subsp. arupensis, and B. washoensis, respectively. The other two phylogroups were not genetically related to any known Bartonella species. The genetic variants and phylogenetic groups exhibited a high degree of host specificity, mainly at the genus and family levels. This is the first study that describes the genetic diversity of Bartonella strains in wild rodents from Mexico. Considering that some variants found in this study are associated with Bartonella species that have been reported as zoonotic, more investigations are needed to further understand the ecology of Bartonella species in Mexican wildlife and their implications for human health.

Moving HammerCloud to CERN's private cloud

CERN Document Server

Barrand, Quentin

2013-01-01

HammerCloud is a testing framework for the Worldwide LHC Computing Grid. Currently deployed on about 20 hand-managed machines, it was desirable to move it to the Agile Infrastructure, CERN's OpenStack-based private cloud.

Synanthropic rodents as possible reservoirs of shigatoxigenic Escherichia coli strains

Directory of Open Access Journals (Sweden)

Ximena eBlanco Crivelli

2012-11-01

Full Text Available Shigatoxigenic Escherichia coli (STEC strains are worldwide zoonotic pathogen responsible for different cases of human disease including hemolytic uremic syndrome (HUS. Transmission of STEC to humans occurs through the consumption of food and water contaminated by faeces of carriers and by person-to-person contact.The objective of this study was twofold: (a to investigate whether synanthropic rodents are possible reservoirs of STEC in the urban area and (b whether a particular genus out of synanthropic rodent is the principal carrier of STEC.One hundred forty-five rodents were captured in Buenos Aires City. Screening for stx1/stx2 and rfbO157 was done by PCR from the confluence zone. STEC isolates were further characterized with biochemical tests by standard methods. Additional virulence factors (eae, ehxA and saa were also determined by PCR. Forty-one of the rodents were necropsied and sample of kidney and small and large intestine were taken for histopathological diagnosis. The samples sections were stained with hematoxylin-eosin, and observed by light microscopy to evaluate the systemic involvement of these species in natural infections. STEC was isolated from seven out of twenty seven suspect animals at screening. The following genotypes were found in the STEC strains: stx1/stx2/ehxA (1, stx2 (4, stx2/ehxA (1, stx2/ehxA/eae (1. Neither gross nor microscopic lesions compatible with those produced by Shiga toxin were observed in the studied organs of necropsied rodents.The bivariate analysis including the hundred forty-five rodents data showed that the isolation of STEC is associated positively to Rattus genus. This synanthropic species may play a role in the transmissibility of the agent thus being a risk to the susceptible population. Their control should be included specifically in actions to dismiss the contamination of food and water by STEC in the urban area, as additional strategies for epidemiological control.

Cloud Robotics Platforms

Directory of Open Access Journals (Sweden)

Busra Koken

2015-01-01

Full Text Available Cloud robotics is a rapidly evolving field that allows robots to offload computation-intensive and storage-intensive jobs into the cloud. Robots are limited in terms of computational capacity, memory and storage. Cloud provides unlimited computation power, memory, storage and especially collaboration opportunity. Cloud-enabled robots are divided into two categories as standalone and networked robots. This article surveys cloud robotic platforms, standalone and networked robotic works such as grasping, simultaneous localization and mapping (SLAM and monitoring.

Cloud Activation Potentials for Atmospheric α-Pinene and β-Caryophyllene Ozonolysis Products.

Science.gov (United States)

Gray Bé, Ariana; Upshur, Mary Alice; Liu, Pengfei; Martin, Scot T; Geiger, Franz M; Thomson, Regan J

2017-07-26

The formation of atmospheric cloud droplets due to secondary organic aerosol (SOA) particles is important for quantifying the Earth's radiative balance under future, possibly warmer, climates, yet is only poorly understood. While cloud activation may be parametrized using the surface tension depression that coincides with surfactant partitioning to the gas-droplet interface, the extent to which cloud activation is influenced by both the chemical structure and reactivity of the individual molecules comprising this surfactant pool is largely unknown. We report herein considerable differences in the surface tension depression of aqueous pendant droplets that contain synthetically prepared ozonolysis products derived from α-pinene and β-caryophyllene, the most abundant of the monoterpenes and sesquiterpenes, respectively, that are emitted over the planet's vast forest ecosystems. Oxidation products derived from β-caryophyllene were found to exhibit significantly higher surface activity than those prepared from α-pinene, with the critical supersaturation required for cloud droplet activation reduced by 50% for β-caryophyllene aldehyde at 1 mM. These considerable reductions in the critical supersaturation were found to coincide with free energies of adsorption that exceed ∼25 kJ/mol, or just one hydrogen bond equivalent, depending on the ammonium sulfate and oxidation product concentration in the solution. Additional experiments showed that aldehyde-containing oxidation products exist in equilibrium with hydrated forms in aqueous solution, which may modulate their bulk solubility and surface activity. Equilibration time scales on the order of 10 -5 to 10 -4 s calculated for micrometer-sized aerosol particles indicate instantaneous surface tension depression in the activation processes leading to cloud formation in the atmosphere. Our findings highlight the underlying importance of molecular structure and reactivity when considering cloud condensation activity in

Cloud ERP and Cloud Accounting Software in Romania

Directory of Open Access Journals (Sweden)

Gianina MIHAI

2015-05-01

Full Text Available Nowadays, Cloud Computing becomes a more and more fashionable concept in the IT environment. There is no unanimous opinion on the definition of this concept, as it covers several versions of the newly emerged stage in the IT. But in fact, Cloud Computing should not suggest anything else than simplicity. Thus, in short, simple terms, Cloud Computing can be defined as a solution to use external IT resources (servers, storage media, applications and services, via Internet. Cloud computing is nothing more than the promise of an easy accessible technology. If the promise will eventually turn into something certain yet remains to be seen. In our opinion it is too early to make an assertion. In this article, our purpose is to find out what is the Romanian offer of ERP and Accounting software applications in Cloud and / or as services in SaaS version. Thus, we conducted an extensive study whose results we’ll present in the following.

Security prospects through cloud computing by adopting multiple clouds

DEFF Research Database (Denmark)

Jensen, Meiko; Schwenk, Jörg; Bohli, Jens Matthias

2011-01-01

Clouds impose new security challenges, which are amongst the biggest obstacles when considering the usage of cloud services. This triggered a lot of research activities in this direction, resulting in a quantity of proposals targeting the various security threats. Besides the security issues coming...... with the cloud paradigm, it can also provide a new set of unique features which open the path towards novel security approaches, techniques and architectures. This paper initiates this discussion by contributing a concept which achieves security merits by making use of multiple distinct clouds at the same time....

BEHAVIOURAL STUDIES ON SOME RHODESIAN RODENTS

African Journals Online (AJOL)

behaviour, . courtship, parental and juvenile behaviour and activity patterns. ... behavioural observations were facilitated by the development of a glass-fronted ~'double-storey" cage which ..... Adolescent siblings in both single sex and mixed groups ..... Wild rodents as Laboratory Animals and their contribution to medical.

Vision in laboratory rodents-Tools to measure it and implications for behavioral research.

Science.gov (United States)

Leinonen, Henri; Tanila, Heikki

2017-07-29

Mice and rats are nocturnal mammals and their vision is specialized for detection of motion and contrast in dim light conditions. These species possess a large proportion of UV-sensitive cones in their retinas and the majority of their optic nerve axons target superior colliculus rather than visual cortex. Therefore, it was a widely held belief that laboratory rodents hardly utilize vision during day-time behavior. This dogma is being questioned as accumulating evidence suggests that laboratory rodents are able to perform complex visual functions, such as perceiving subjective contours, and that declined vision may affect their performance in many behavioral tasks. For instance, genetic engineering may have unexpected consequences on vision as mouse models of Alzheimer's and Huntington's diseases have declined visual function. Rodent vision can be tested in numerous ways using operant training or reflex-based behavioral tasks, or alternatively using electrophysiological recordings. In this article, we will first provide a summary of visual system and explain its characteristics unique to rodents. Then, we present well-established techniques to test rodent vision, with an emphasis on pattern vision: visual water test, optomotor reflex test, pattern electroretinography and pattern visual evoked potentials. Finally, we highlight the importance of visual phenotyping in rodents. As the number of genetically engineered rodent models and volume of behavioral testing increase simultaneously, the possibility of visual dysfunctions needs to be addressed. Neglect in this matter potentially leads to crude biases in the field of neuroscience and beyond. Copyright © 2017 Elsevier B.V. All rights reserved.

A test of five mechanisms of species coexistence between rodents in ...

African Journals Online (AJOL)

A test of five mechanisms of species coexistence between rodents in a southern African savanna. M.R. Perrin, B.P. Kotler. Abstract. The operation of five different mechanisms of species coexistence in a community of rodents was examined in a semi-arid Kalahari savanna in southern Africa. The two most common species ...

Landscape-scale drivers of glacial ecosystem change in the montane forests of the eastern Andean flank, Ecuador

NARCIS (Netherlands)

Loughlin, N.J.D.; Gosling, W.D.; Coe, A.L.; Gulliver, P.; Mothes, P.; Montoya, E.

2018-01-01

Understanding the impact of landscape-scale disturbance events during the last glacial period is vital in accurately reconstructing the ecosystem dynamics of montane environments. Here, a sedimentary succession from the tropical montane cloud forest of the eastern Andean flank of Ecuador provides

Radiative properties of clouds

International Nuclear Information System (INIS)

Twomey, S.

1993-01-01

The climatic effects of condensation nuclei in the formation of cloud droplets and the subsequent role of the cloud droplets as contributors to the planetary short-wave albedo is emphasized. Microphysical properties of clouds, which can be greatly modified by the degree of mixing with cloud-free air from outside, are discussed. The effect of clouds on visible radiation is assessed through multiple scattering of the radiation. Cloudwater or ice absorbs more with increasing wavelength in the near-infrared region, with water vapor providing the stronger absorption over narrower wavelength bands. Cloud thermal infrared absorption can be solely related to liquid water content at least for shallow clouds and clouds in the early development state. Three-dimensional general circulation models have been used to study the climatic effect of clouds. It was found for such studies (which did not consider variations in cloud albedo) that the cooling effects due to the increase in planetary short-wave albedo from clouds were offset by heating effects due to thermal infrared absorption by the cloud. Two permanent direct effects of increased pollution are discussed in this chapter: (a) an increase of absorption in the visible and near infrared because of increased amounts of elemental carbon, which gives rise to a warming effect climatically, and (b) an increased optical thickness of clouds due to increasing cloud droplet number concentration caused by increasing cloud condensation nuclei number concentration, which gives rise to a cooling effect climatically. An increase in cloud albedo from 0.7 to 0.87 produces an appreciable climatic perturbation of cooling up to 2.5 K at the ground, using a hemispheric general circulation model. Effects of pollution on cloud thermal infrared absorption are negligible

Accumulation of radioactivity in mushrooms and its relation with the mycophagous rodents biology in an Abies religiosa forest; Acumulacion de radiactividad en hongos y su relacion con la biologia de roedores micofagos en un bosque de Abies religiosa

Energy Technology Data Exchange (ETDEWEB)

Valenzuela G, V.H

2001-07-01

Nowadays the society expresses its concern by the action of the nuclear energy with respect to installations safety, the transport of radioactive materials, the radioactive waste management, nuclear accidents and nuclear tests. The concern is based to the fear of radioactive explosion which contaminates the environment and the damages to the public health. The mathematical models which establish and define the behavior and the exposure conditions of radioactive substances in the human beings as well as the systematic deposit in the terrestrial surface of the particles suspended in the air which contain radioactive material are called fallout, that is a contamination indicator. The objective of this work is to identify the little rodents species with greater accumulation of radionuclides of artificial origin. Due to the mushrooms are good bio indicators of radioactive contamination and the rodents consume them often, both are of greater assistance as indicators of this type of contamination and contribute to the knowledge of the {sup 137} Cs and {sup 40} K dynamics at the forest system. This work forms part of the environmental radiological surveillance of the Mexican Nuclear Center (CNM) in which are analysed several samples which will be used as biological indicators of radioactive contamination which serve for the transfer coefficient calculations of the different routes by which the radiation can to arrive to the human being, being able to be evaluated the dose to the people who live at the CNM surrounding area. Due to not always it is possible to detect so lowest levels of radioactivity in some environmental samples (air, water and, foods) it is necessary to quantify them in other animals or plants which accumulate them. (Author)

CLOUD STORAGE SERVICES

OpenAIRE

Yan, Cheng

2017-01-01

Cloud computing is a hot topic in recent research and applications. Because it is widely used in various fields. Up to now, Google, Microsoft, IBM, Amazon and other famous co partnership have proposed their cloud computing application. Look upon cloud computing as one of the most important strategy in the future. Cloud storage is the lower layer of cloud computing system which supports the service of the other layers above it. At the same time, it is an effective way to store and manage heavy...

CloudSat observations of cloud-type distribution over the Indian summer monsoon region

Directory of Open Access Journals (Sweden)

K. V. Subrahmanyam

2013-07-01

Full Text Available The three-dimensional distribution of various cloud types over the Indian summer monsoon (ISM region using five years (2006–2010 of CloudSat observations during June-July-August-September months is discussed for the first time. As the radiative properties, latent heat released and microphysical properties of clouds differ largely depending on the cloud type, it becomes important to know what types of clouds occur over which region. In this regard, the present analysis establishes the three-dimensional distribution of frequency of occurrence of stratus (St, stratocumulus (Sc, nimbostratus (Ns, cumulus (Cu, altocumulus (Ac, altostratus (As, cirrus (Ci and deep convective (DC clouds over the ISM region. The results show that the various cloud types preferentially occur over some regions of the ISM, which are consistent during all the years of observations. It is found that the DC clouds frequently occur over northeast of Bay of Bengal (BoB, Ci clouds over a wide region of south BoB–Indian peninsula–equatorial Indian Ocean, and Sc clouds over the north Arabian Sea. Ac clouds preferentially occur over land, and a large amount of As clouds are found over BoB. The occurrence of both St and Ns clouds over the study region is much lower than all other cloud types.The interannual variability of all these clouds including their vertical distribution is discussed. It is envisaged that the present study opens up possibilities to quantify the feedback of individual cloud type in the maintenance of the ISM through radiative forcing and latent heat release.

VMware vCloud security

CERN Document Server

Sarkar, Prasenjit

2013-01-01

VMware vCloud Security provides the reader with in depth knowledge and practical exercises sufficient to implement a secured private cloud using VMware vCloud Director and vCloud Networking and Security.This book is primarily for technical professionals with system administration and security administration skills with significant VMware vCloud experience who want to learn about advanced concepts of vCloud security and compliance.

Historical Fire Detection of Tropical Forest from NDVI Time-series Data: Case Study on Jambi, Indonesia

Directory of Open Access Journals (Sweden)

Dyah R. Panuju

2010-03-01

Full Text Available In addition to forest encroachment, forest fire is a serious problem in Indonesia. Attempts at managing its widespread and frequent occurrence has led to intensive use of remote sensing data. Coarse resolution images have been employed to derive hot spots as an indicator of forest fire. However, most efforts to verify the hot spot data and to verify fire accidents have been restricted to the use of medium or high resolution data. At present, it is difficult to verify solely upon those data due to severe cloud cover and low revisit time. In this paper, we present a method to validate forest fire using NDVI time series data. With the freely available NDVI data from SPOT VEGETATION, we successfully detected changes in time series data which were associated with fire accidents.

Cloud-Based RFID Mutual Authentication Protocol without Leaking Location Privacy to the Cloud

OpenAIRE

Dong, Qingkuan; Tong, Jiaqing; Chen, Yuan

2015-01-01

With the rapid developments of the IoT (Internet of Things) and the cloud computing, cloud-based RFID systems attract more attention. Users can reduce their cost of deploying and maintaining the RFID system by purchasing cloud services. However, the security threats of cloud-based RFID systems are more serious than those of traditional RFID systems. In cloud-based RFID systems, the connection between the reader and the cloud database is not secure and cloud service provider is not trusted. Th...

Cloud Computing Bible

CERN Document Server

Sosinsky, Barrie

2010-01-01

The complete reference guide to the hot technology of cloud computingIts potential for lowering IT costs makes cloud computing a major force for both IT vendors and users; it is expected to gain momentum rapidly with the launch of Office Web Apps later this year. Because cloud computing involves various technologies, protocols, platforms, and infrastructure elements, this comprehensive reference is just what you need if you'll be using or implementing cloud computing.Cloud computing offers significant cost savings by eliminating upfront expenses for hardware and software; its growing popularit

Integrated cloud-aerosol-radiation product using CERES, MODIS, CALIPSO, and CloudSat data

Science.gov (United States)

Sun-Mack, Sunny; Minnis, Patrick; Chen, Yan; Gibson, Sharon; Yi, Yuhong; Trepte, Qing; Wielicki, Bruce; Kato, Seiji; Winker, Dave; Stephens, Graeme; Partain, Philip

2007-10-01

This paper documents the development of the first integrated data set of global vertical profiles of clouds, aerosols, and radiation using the combined NASA A-Train data from the Aqua Clouds and Earth's Radiant Energy System (CERES) and Moderate Resolution Imaging Spectroradiometer (MODIS), Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations (CALIPSO), and CloudSat. As part of this effort, cloud data from the CALIPSO lidar and the CloudSat radar are merged with the integrated column cloud properties from the CERES-MODIS analyses. The active and passive datasets are compared to determine commonalities and differences in order to facilitate the development of a 3-dimensional cloud and aerosol dataset that will then be integrated into the CERES broadband radiance footprint. Preliminary results from the comparisons for April 2007 reveal that the CERES-MODIS global cloud amounts are, on average, 0.14 less and 0.15 greater than those from CALIPSO and CloudSat, respectively. These new data will provide unprecedented ability to test and improve global cloud and aerosol models, to investigate aerosol direct and indirect radiative forcing, and to validate the accuracy of global aerosol, cloud, and radiation data sets especially in polar regions and for multi-layered cloud conditions.