WorldWideScience

Sample records for circuit spatio-temporal filtering

  1. Advanced spatio-temporal filtering techniques for photogrammetric image sequence analysis in civil engineering material testing

    Science.gov (United States)

    Liebold, F.; Maas, H.-G.

    2016-01-01

    The paper shows advanced spatial, temporal and spatio-temporal filtering techniques which may be used to reduce noise effects in photogrammetric image sequence analysis tasks and tools. As a practical example, the techniques are validated in a photogrammetric spatio-temporal crack detection and analysis tool applied in load tests in civil engineering material testing. The load test technique is based on monocular image sequences of a test object under varying load conditions. The first image of a sequence is defined as a reference image under zero load, wherein interest points are determined and connected in a triangular irregular network structure. For each epoch, these triangles are compared to the reference image triangles to search for deformations. The result of the feature point tracking and triangle comparison process is a spatio-temporally resolved strain value field, wherein cracks can be detected, located and measured via local discrepancies. The strains can be visualized as a color-coded map. In order to improve the measuring system and to reduce noise, the strain values of each triangle must be treated in a filtering process. The paper shows the results of various filter techniques in the spatial and in the temporal domain as well as spatio-temporal filtering techniques applied to these data. The best results were obtained by a bilateral filter in the spatial domain and by a spatio-temporal EOF (empirical orthogonal function) filtering technique.

  2. Joint Spatio-Temporal Filtering Methods for DOA and Fundamental Frequency Estimation

    DEFF Research Database (Denmark)

    Jensen, Jesper Rindom; Christensen, Mads Græsbøll; Benesty, Jacob;

    2015-01-01

    In this paper, spatio-temporal filtering methods are proposed for estimating the direction-of-arrival (DOA) and fundamental frequency of periodic signals, like those produced by the speech production system and many musical instruments using microphone arrays. This topic has quite recently received...

  3. The impact of seasonal signals on spatio-temporal filtering

    Science.gov (United States)

    Gruszczynski, Maciej; Klos, Anna; Bogusz, Janusz

    2016-04-01

    Existence of Common Mode Errors (CMEs) in permanent GNSS networks contribute to spatial and temporal correlation in residual time series. Time series from permanently observing GNSS stations of distance less than 2 000 km are similarly influenced by such CME sources as: mismodelling (Earth Orientation Parameters - EOP, satellite orbits or antenna phase center variations) during the process of the reference frame realization, large-scale atmospheric and hydrospheric effects as well as small scale crust deformations. Residuals obtained as a result of detrending and deseasonalising of topocentric GNSS time series arranged epoch-by-epoch form an observation matrix independently for each component (North, East, Up). CME is treated as internal structure of the data. Assuming a uniform temporal function across the network it is possible to filter CME out using PCA (Principal Component Analysis) approach. Some of above described CME sources may be reflected as a wide range of frequencies in GPS residual time series. In order to determine an impact of seasonal signals modeling to existence of spatial correlation in network and consequently the results of CME filtration, we chose two ways of modeling. The first approach was commonly presented by previous authors, who modeled with the Least-Squares Estimation (LSE) only annual and semi-annual oscillations. In the second one the set of residuals was a result of modeling of deterministic part that included fortnightly periods plus up to 9th harmonics of Chandlerian, tropical and draconitic oscillations. Correlation coefficients for residuals in parallel with KMO (Kaiser-Meyer-Olkin) statistic and Bartlett's test of sphericity were determined. For this research we used time series expressed in ITRF2008 provided by JPL (Jet Propulsion Laboratory). GPS processing was made using GIPSY-OASIS software in a PPP (Precise Point Positioning) mode. In order to form GPS station network that meet demands of uniform spatial response to the

  4. Video Enhancement Using Adaptive Spatio-Temporal Connective Filter and Piecewise Mapping

    Directory of Open Access Journals (Sweden)

    Shi-Qiang Yang

    2008-06-01

    Full Text Available This paper presents a novel video enhancement system based on an adaptive spatio-temporal connective (ASTC noise filter and an adaptive piecewise mapping function (APMF. For ill-exposed videos or those with much noise, we first introduce a novel local image statistic to identify impulse noise pixels, and then incorporate it into the classical bilateral filter to form ASTC, aiming to reduce the mixture of the most two common types of noises—Gaussian and impulse noises in spatial and temporal directions. After noise removal, we enhance the video contrast with APMF based on the statistical information of frame segmentation results. The experiment results demonstrate that, for diverse low-quality videos corrupted by mixed noise, underexposure, overexposure, or any mixture of the above, the proposed system can automatically produce satisfactory results.

  5. Video Enhancement Using Adaptive Spatio-Temporal Connective Filter and Piecewise Mapping

    Directory of Open Access Journals (Sweden)

    Wang Chao

    2008-01-01

    Full Text Available This paper presents a novel video enhancement system based on an adaptive spatio-temporal connective (ASTC noise filter and an adaptive piecewise mapping function (APMF. For ill-exposed videos or those with much noise, we first introduce a novel local image statistic to identify impulse noise pixels, and then incorporate it into the classical bilateral filter to form ASTC, aiming to reduce the mixture of the most two common types of noises—Gaussian and impulse noises in spatial and temporal directions. After noise removal, we enhance the video contrast with APMF based on the statistical information of frame segmentation results. The experiment results demonstrate that, for diverse low-quality videos corrupted by mixed noise, underexposure, overexposure, or any mixture of the above, the proposed system can automatically produce satisfactory results.

  6. Spatio-temporal filtering techniques for the detection of disaster-related communication.

    Science.gov (United States)

    Fitzhugh, Sean M; Ben Gibson, C; Spiro, Emma S; Butts, Carter T

    2016-09-01

    Individuals predominantly exchange information with one another through informal, interpersonal channels. During disasters and other disrupted settings, information spread through informal channels regularly outpaces official information provided by public officials and the press. Social scientists have long examined this kind of informal communication in the rumoring literature, but studying rumoring in disrupted settings has posed numerous methodological challenges. Measuring features of informal communication-timing, content, location-with any degree of precision has historically been extremely challenging in small studies and infeasible at large scales. We address this challenge by using online, informal communication from a popular microblogging website and for which we have precise spatial and temporal metadata. While the online environment provides a new means for observing rumoring, the abundance of data poses challenges for parsing hazard-related rumoring from countless other topics in numerous streams of communication. Rumoring about disaster events is typically temporally and spatially constrained to places where that event is salient. Accordingly, we use spatio and temporal subsampling to increase the resolution of our detection techniques. By filtering out data from known sources of error (per rumor theories), we greatly enhance the signal of disaster-related rumoring activity. We use these spatio-temporal filtering techniques to detect rumoring during a variety of disaster events, from high-casualty events in major population centers to minimally destructive events in remote areas. We consistently find three phases of response: anticipatory excitation where warnings and alerts are issued ahead of an event, primary excitation in and around the impacted area, and secondary excitation which frequently brings a convergence of attention from distant locales onto locations impacted by the event. Our results demonstrate the promise of spatio-temporal

  7. Catchments as space-time filters – a joint spatio-temporal geostatistical analysis of runoff and precipitation

    Directory of Open Access Journals (Sweden)

    J. O. Skøien

    2006-06-01

    Full Text Available In this paper catchments are conceptualised as linear space-time filters. Catchment area A is interpreted as the spatial support and the catchment response time Tis interpreted as the temporal support of the runoff measurements. These two supports are related by T~Aκ which embodies the space-time connections of the rainfall-runoff process from a geostatistical perspective. To test the framework, spatio-temporal variograms are estimated from about 30 years of quarter hourly precipitation and runoff data from about 500 catchments in Austria. In a first step, spatio-temporal variogram models are fitted to the sample variograms for three catchment size classes independently. In a second step, variograms are fitted to all three catchment size classes jointly by estimating the parameters of a point/instantaneous spatio-temporal variogram model and aggregating (regularising it to the spatial and temporal scales of the catchments. The exponential, Cressie-Huang and product-sum variogram models give good fits to the sample variograms of runoff with dimensionless errors ranging from 0.02 to 0.03, and the model parameters are plausible. This indicates that the first order effects of the spatio-temporal variability of runoff are indeed captured by conceptualising catchments as linear space-time filters. The scaling exponent κ is found to vary between 0.3 and 0.4 for different variogram models.

  8. Catchments as space-time filters – a joint spatio-temporal geostatistical analysis of runoff and precipitation

    Directory of Open Access Journals (Sweden)

    J. O. Skøien

    2006-01-01

    Full Text Available In this paper catchments are conceptualised as linear space-time filters. Catchment area A is interpreted as the spatial support and the catchment response time T is interpreted as the temporal support of the runoff measurements. These two supports are related by T~Aκ which embodies the space-time connections of the rainfall-runoff process from a geostatistical perspective. To test the framework, spatio-temporal variograms are estimated from about 30 years of quarter hourly precipitation and runoff data from about 500 catchments in Austria. In a first step, spatio-temporal variogram models are fitted to the sample variograms for three catchment size classes independently. In a second step, variograms are fitted to all three catchment size classes jointly by estimating the parameters of a point/instantaneous spatio-temporal variogram model and aggregating (regularising it to the spatial and temporal scales of the catchments. The exponential, Cressie-Huang and product-sum variogram models give good fits to the sample variograms of runoff with dimensionless errors ranging from 0.02 to 0.03, and the model parameters are plausible. This indicates that the first order effects of the spatio-temporal variability of runoff are indeed captured by conceptualising catchments as linear space-time filters. The scaling exponent κ is found to vary between 0.3 and 0.4 for different variogram models.

  9. Spatio-temporal auxiliary particle filtering with l1-norm-based appearance model learning for robust visual tracking.

    Science.gov (United States)

    Kim, Du Yong; Jeon, Moongu

    2013-02-01

    In this paper, we propose an efficient and accurate visual tracker equipped with a new particle filtering algorithm and robust subspace learning-based appearance model. The proposed visual tracker avoids drifting problems caused by abrupt motion changes and severe appearance variations that are well-known difficulties in visual tracking. The proposed algorithm is based on a type of auxiliary particle filtering that uses a spatio-temporal sliding window. Compared to conventional particle filtering algorithms, spatio-temporal auxiliary particle filtering is computationally efficient and successfully implemented in visual tracking. In addition, a real-time robust principal component pursuit (RRPCP) equipped with l(1)-norm optimization has been utilized to obtain a new appearance model learning block for reliable visual tracking especially for occlusions in object appearance. The overall tracking framework based on the dual ideas is robust against occlusions and out-of-plane motions because of the proposed spatio-temporal filtering and recursive form of RRPCP. The designed tracker has been evaluated using challenging video sequences, and the results confirm the advantage of using this tracker.

  10. Non-linear spatio-temporal filtering of dynamic PET data using a 4-dimensional Gaussian filter and expectation-maximization deconvolution

    OpenAIRE

    Floberg, J M; Holden, J.E.

    2013-01-01

    We introduce a method for denoising dynamic PET data, spatio-temporal expectation-maximization (STEM) filtering, that combines 4-dimensional Gaussian filtering with EM deconvolution. The initial Gaussian filter suppresses noise at a broad range of spatial and temporal frequencies and EM deconvolution quickly restores the frequencies most important to the signal. We aim to demonstrate that STEM filtering can improve variance in both individual time frames and in parametric images without intro...

  11. A spatio-temporal filtering approach to denoising of single-trial ERP in rapid image triage.

    Science.gov (United States)

    Yu, Ke; Shen, Kaiquan; Shao, Shiyun; Ng, Wu Chun; Kwok, Kenneth; Li, Xiaoping

    2012-03-15

    Conventional search for images containing points of interest (POI) in large-volume imagery is costly and sometimes even infeasible. The rapid image triage (RIT) system which is a human cognition guided computer vision technique is potentially a promising solution to the problem. In the RIT procedure, images are sequentially presented to a subject at a high speed. At the instant of observing a POI image, unique POI event-related potentials (ERP) characterized by P300 will be elicited and measured on the scalp. With accurate single-trial detection of such unique ERP, RIT can differentiate POI images from non-POI images. However, like other brain-computer interface systems relying on single-trial detection, RIT suffers from the low signal-to-noise ratio (SNR) of the single-trial ERP. This paper presents a spatio-temporal filtering approach tailored for the denoising of single-trial ERP for RIT. The proposed approach is essentially a non-uniformly delayed spatial Gaussian filter that attempts to suppress the non-event related background electroencephalogram (EEG) and other noises without significantly attenuating the useful ERP signals. The efficacy of the proposed approach is illustrated by both simulation tests and real RIT experiments. In particular, the real RIT experiments on 20 subjects show a statistically significant and meaningful average decrease of 9.8% in RIT classification error rate, compared to that without the proposed approach.

  12. A Mobile Kalman-Filter Based Solution for the Real-Time Estimation of Spatio-Temporal Gait Parameters.

    Science.gov (United States)

    Ferrari, Alberto; Ginis, Pieter; Hardegger, Michael; Casamassima, Filippo; Rocchi, Laura; Chiari, Lorenzo

    2016-07-01

    Gait impairments are among the most disabling symptoms in several musculoskeletal and neurological conditions, severely limiting personal autonomy. Wearable gait sensors have been attracting attention as diagnostic tool for gait and are emerging as promising tool for tutoring and guiding gait execution. If their popularity is continuously growing, still there is room for improvement, especially towards more accurate solutions for spatio-temporal gait parameters estimation. We present an implementation of a zero-velocity-update gait analysis system based on a Kalman filter and off-the-shelf shoe-worn inertial sensors. The algorithms for gait events and step length estimation were specifically designed to comply with pathological gait patterns. More so, an Android app was deployed to support fully wearable and stand-alone real-time gait analysis. Twelve healthy subjects were enrolled to preliminarily tune the algorithms; afterwards sixteen persons with Parkinson's disease were enrolled for a validation study. Over the 1314 strides collected on patients at three different speeds, the total root mean square difference on step length estimation between this system and a gold standard was 2.9%. This shows that the proposed method allows for an accurate gait analysis and paves the way to a new generation of mobile devices usable anywhere for monitoring and intervention.

  13. A Mobile Kalman-Filter Based Solution for the Real-Time Estimation of Spatio-Temporal Gait Parameters.

    Science.gov (United States)

    Ferrari, Alberto; Ginis, Pieter; Hardegger, Michael; Casamassima, Filippo; Rocchi, Laura; Chiari, Lorenzo

    2016-07-01

    Gait impairments are among the most disabling symptoms in several musculoskeletal and neurological conditions, severely limiting personal autonomy. Wearable gait sensors have been attracting attention as diagnostic tool for gait and are emerging as promising tool for tutoring and guiding gait execution. If their popularity is continuously growing, still there is room for improvement, especially towards more accurate solutions for spatio-temporal gait parameters estimation. We present an implementation of a zero-velocity-update gait analysis system based on a Kalman filter and off-the-shelf shoe-worn inertial sensors. The algorithms for gait events and step length estimation were specifically designed to comply with pathological gait patterns. More so, an Android app was deployed to support fully wearable and stand-alone real-time gait analysis. Twelve healthy subjects were enrolled to preliminarily tune the algorithms; afterwards sixteen persons with Parkinson's disease were enrolled for a validation study. Over the 1314 strides collected on patients at three different speeds, the total root mean square difference on step length estimation between this system and a gold standard was 2.9%. This shows that the proposed method allows for an accurate gait analysis and paves the way to a new generation of mobile devices usable anywhere for monitoring and intervention. PMID:26259246

  14. Nonlinear spatio-temporal filtering of dynamic PET data using a four-dimensional Gaussian filter and expectation-maximization deconvolution

    International Nuclear Information System (INIS)

    We introduce a method for denoising dynamic PET data, spatio-temporal expectation-maximization (STEM) filtering, that combines four-dimensional Gaussian filtering with EM deconvolution. The initial Gaussian filter suppresses noise at a broad range of spatial and temporal frequencies and EM deconvolution quickly restores the frequencies most important to the signal. We aim to demonstrate that STEM filtering can improve variance in both individual time frames and in parametric images without introducing significant bias. We evaluate STEM filtering with a dynamic phantom study, and with simulated and human dynamic PET studies of a tracer with reversible binding behaviour, [C-11]raclopride, and a tracer with irreversible binding behaviour, [F-18]FDOPA. STEM filtering is compared to a number of established three and four-dimensional denoising methods. STEM filtering provides substantial improvements in variance in both individual time frames and in parametric images generated with a number of kinetic analysis techniques while introducing little bias. STEM filtering does bias early frames, but this does not affect quantitative parameter estimates. STEM filtering is shown to be superior to the other simple denoising methods studied. STEM filtering is a simple and effective denoising method that could be valuable for a wide range of dynamic PET applications. (paper)

  15. Spatio-Temporal Rule Mining

    DEFF Research Database (Denmark)

    Gidofalvi, Gyozo; Pedersen, Torben Bach

    2005-01-01

    Recent advances in communication and information technology, such as the increasing accuracy of GPS technology and the miniaturization of wireless communication devices pave the road for Location-Based Services (LBS). To achieve high quality for such services, spatio-temporal data mining techniques...... are needed. In this paper, we describe experiences with spatio-temporal rule mining in a Danish data mining company. First, a number of real world spatio-temporal data sets are described, leading to a taxonomy of spatio-temporal data. Second, the paper describes a general methodology that transforms...... the spatio-temporal rule mining task to the traditional market basket analysis task and applies it to the described data sets, enabling traditional association rule mining methods to discover spatio-temporal rules for LBS. Finally, unique issues in spatio-temporal rule mining are identified and discussed....

  16. Circuits and filters handbook

    CERN Document Server

    Chen, Wai-Kai

    2003-01-01

    A bestseller in its first edition, The Circuits and Filters Handbook has been thoroughly updated to provide the most current, most comprehensive information available in both the classical and emerging fields of circuits and filters, both analog and digital. This edition contains 29 new chapters, with significant additions in the areas of computer-aided design, circuit simulation, VLSI circuits, design automation, and active and digital filters. It will undoubtedly take its place as the engineer's first choice in looking for solutions to problems encountered in the design, analysis, and behavi

  17. Spatio-temporal Laplacian pyramid coding for action recognition.

    Science.gov (United States)

    Shao, Ling; Zhen, Xiantong; Tao, Dacheng; Li, Xuelong

    2014-06-01

    We present a novel descriptor, called spatio-temporal Laplacian pyramid coding (STLPC), for holistic representation of human actions. In contrast to sparse representations based on detected local interest points, STLPC regards a video sequence as a whole with spatio-temporal features directly extracted from it, which prevents the loss of information in sparse representations. Through decomposing each sequence into a set of band-pass-filtered components, the proposed pyramid model localizes features residing at different scales, and therefore is able to effectively encode the motion information of actions. To make features further invariant and resistant to distortions as well as noise, a bank of 3-D Gabor filters is applied to each level of the Laplacian pyramid, followed by max pooling within filter bands and over spatio-temporal neighborhoods. Since the convolving and pooling are performed spatio-temporally, the coding model can capture structural and motion information simultaneously and provide an informative representation of actions. The proposed method achieves superb recognition rates on the KTH, the multiview IXMAS, the challenging UCF Sports, and the newly released HMDB51 datasets. It outperforms state of the art methods showing its great potential on action recognition.

  18. Spatio-temporal chaos : A solvable model

    NARCIS (Netherlands)

    Diks, C; Takens, F; DeGoede, J

    1997-01-01

    A solvable coupled map lattice model exhibiting spatio-temporal chaos is studied. Exact expressions are obtained for the spectra of Lyapunov exponents as a function of the model parameters. Although the model has spatio-temporal structure, the time series measured at a single lattice site are shown

  19. Spatio-temporal optical vortices

    CERN Document Server

    Jhajj, N; Rosenthal, E W; Zahedpour, S; Wahlstrand, J K; Milchberg, H M

    2016-01-01

    We present the first experimental, theoretical, and numerical evidence of spatio-temporal optical vortices (STOVs). Quantized STOVs are a fundamental element of the nonlinear collapse and subsequent propagation of short optical pulses in material media. A STOV consists of a ring-shaped null in the electromagnetic field about which the phase is spiral, forming a dynamic torus which is concentric with and tracks the propagating pulse. Depending on the sign of the material dispersion, the local electromagnetic energy flow is saddle or spiral about the STOV. STOVs are born and evolve conserving topological charge; they can be simultaneously created in pairs with opposite windings, or generated from a point null. Our results, here obtained for optical pulse collapse and filamentation in air, are generalizable to a broad class of nonlinearly propagating waves.

  20. Spatio-Temporal Dynamics in Cellular Neural Networks

    Directory of Open Access Journals (Sweden)

    Liviu GORAS

    2009-07-01

    Full Text Available Analog Parallel Architectures like Cellular Neural Networks (CNN’s have been thoroughly studied not only for their potential in high-speed image processing applications but also for their rich and exciting spatio-temporal dynamics. An interesting behavior such architectures can exhibit is spatio-temporal filtering and pattern formation, aspects that will be discussed in this work for a general structure consisting of linear cells locally and homogeneously connected within a specified neighborhood. The results are generalizations of those regarding Turing pattern formation in CNN’s. Using linear cells (or piecewise linear cells working in the central linear part of their characteristic allows the use of the decoupling technique – a powerful technique that gives significant insight into the dynamics of the CNN. The roles of the cell structure as well as that of the connection template are discussed and models for the spatial modes dynamics are made as well.

  1. Spatio-Temporal Data Exchange Standards

    DEFF Research Database (Denmark)

    Jensen, Christian Søndergaard; Schmidt, Albrecht

    2003-01-01

    We believe that research that concerns aspects of spatio-temporal data management may benefit from taking into account the various standards for spatio-temporal data formats. For example, this may contribute to rendering prototype software “open” and more readily useful. This paper thus identifies...... and briefly surveys standardization in relation to primarily the exchange and integration of spatio-temporal data. An overview of several data exchange languages is offered, along with reviews their potential for facilitating the collection of test data and the leveraging of prototypes. The standards, most...... of which are XML-based, lend themselves to the integration of prototypes into middleware architectures, e.g., as Web services....

  2. Spatio-temporal Data Model Based on Relational Database System

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    In this paper,the entity-relation data model for integrating spatio-temporal data is designed.In the design,spatio-temporal data can be effectively stored and spatiao-temporal analysis can be easily realized.

  3. Spatio-Temporal Variation in Effects of Upwelling on the Fatty Acid Composition of Benthic Filter Feeders in the Southern Benguela Ecosystem: Not All Upwelling Is Equal.

    Science.gov (United States)

    Puccinelli, Eleonora; McQuaid, Christopher David; Noyon, Margaux

    2016-01-01

    Variability in mesoscale nearshore oceanographic conditions plays an important role in the distribution of primary production and food availability for intertidal consumers. Advection of nutrient rich waters by upwelling usually allows the proliferation of diatoms, later replaced by dinoflagellates. We examined upwelling effects on the fatty acid (FA) signature of a benthic intertidal filter feeder to identify its response to pulsed variability in food availability. The study took place in two contrasting seasons and at two upwelling and two non-upwelling sites interspersed within the southern Benguela upwelling system of South Africa. We investigated the FA composition of the adductor muscles and gonads of the mussel Mytilus galloprovincialis to assess how FA are apportioned to the different tissues and whether this changes between upwelling and non-upwelling conditions. In situ temperature loggers used to identify upwelling conditions at the four sites indicated that such events occurred only at the upwelling centres and only in summer. Tissues differed strongly, with gonads presenting a higher proportion of essential FAs. This could reflect the faster turnover rate of gonad tissue or preferential retention of specific FA for reproductive purposes. FA composition did not vary as a direct function of upwelling, but there were strong dissimilarities among sites. Upwelling influenced mussel diets at one upwelling site while at the other, the expected signature of upwelling was displaced downstream of the core of upwelling. Condition Index (CI) and Gonad Index (GI) differed among sites and were not influenced by upwelling, with GI being comparable among sites. In addition, FA proportions were consistent among sites, indicating similar food quality and quantity over time and under upwelling and non-upwelling conditions. This suggests that the influence of upwelling on the west coast of South Africa is pervasive and diffuse, rather than discrete; while nearshore

  4. Spatio-Temporal Variation in Effects of Upwelling on the Fatty Acid Composition of Benthic Filter Feeders in the Southern Benguela Ecosystem: Not All Upwelling Is Equal

    Science.gov (United States)

    McQuaid, Christopher David; Noyon, Margaux

    2016-01-01

    Variability in mesoscale nearshore oceanographic conditions plays an important role in the distribution of primary production and food availability for intertidal consumers. Advection of nutrient rich waters by upwelling usually allows the proliferation of diatoms, later replaced by dinoflagellates. We examined upwelling effects on the fatty acid (FA) signature of a benthic intertidal filter feeder to identify its response to pulsed variability in food availability. The study took place in two contrasting seasons and at two upwelling and two non-upwelling sites interspersed within the southern Benguela upwelling system of South Africa. We investigated the FA composition of the adductor muscles and gonads of the mussel Mytilus galloprovincialis to assess how FA are apportioned to the different tissues and whether this changes between upwelling and non-upwelling conditions. In situ temperature loggers used to identify upwelling conditions at the four sites indicated that such events occurred only at the upwelling centres and only in summer. Tissues differed strongly, with gonads presenting a higher proportion of essential FAs. This could reflect the faster turnover rate of gonad tissue or preferential retention of specific FA for reproductive purposes. FA composition did not vary as a direct function of upwelling, but there were strong dissimilarities among sites. Upwelling influenced mussel diets at one upwelling site while at the other, the expected signature of upwelling was displaced downstream of the core of upwelling. Condition Index (CI) and Gonad Index (GI) differed among sites and were not influenced by upwelling, with GI being comparable among sites. In addition, FA proportions were consistent among sites, indicating similar food quality and quantity over time and under upwelling and non-upwelling conditions. This suggests that the influence of upwelling on the west coast of South Africa is pervasive and diffuse, rather than discrete; while nearshore

  5. The Voronoi spatio-temporal data structure

    Science.gov (United States)

    Mioc, Darka

    2002-04-01

    Current GIS models cannot integrate the temporal dimension of spatial data easily. Indeed, current GISs do not support incremental (local) addition and deletion of spatial objects, and they can not support the temporal evolution of spatial data. Spatio-temporal facilities would be very useful in many GIS applications: harvesting and forest planning, cadastre, urban and regional planning, and emergency planning. The spatio-temporal model that can overcome these problems is based on a topological model---the Voronoi data structure. Voronoi diagrams are irregular tessellations of space, that adapt to spatial objects and therefore they are a synthesis of raster and vector spatial data models. The main advantage of the Voronoi data structure is its local and sequential map updates, which allows us to automatically record each event and performed map updates within the system. These map updates are executed through map construction commands that are composed of atomic actions (geometric algorithms for addition, deletion, and motion of spatial objects) on the dynamic Voronoi data structure. The formalization of map commands led to the development of a spatial language comprising a set of atomic operations or constructs on spatial primitives (points and lines), powerful enough to define the complex operations. This resulted in a new formal model for spatio-temporal change representation, where each update is uniquely characterized by the numbers of newly created and inactivated Voronoi regions. This is used for the extension of the model towards the hierarchical Voronoi data structure. In this model, spatio-temporal changes induced by map updates are preserved in a hierarchical data structure that combines events and corresponding changes in topology. This hierarchical Voronoi data structure has an implicit time ordering of events visible through changes in topology, and it is equivalent to an event structure that can support temporal data without precise temporal

  6. Comprehensive Retrieval of Spatio-temporal Variations in Atmospheric Radionuclides just after the Fukushima Accident by Analyzing Filter-tapes of Operational Air Pollution Monitoring Stations in Eastern Japan

    Science.gov (United States)

    Tsuruta, Haruo; Oura, Yasuji; Ebihara, Mitsuru; Ohara, Toshimasa; Moriguchi, Yuichi; Nakajima, Teruyuki

    2016-04-01

    After the Fukushima Daiichi Nuclear Power Station (FD1NPS) accident on March 11, 2011, many datasets have been available of deposition density of radionuclides in soils in eastern Japan. By contrast, no time-series data of atmospheric radionuclides has been measured in the Fukushima prefecture (FP), although very limited data is available in the Tokyo metropolitan area (TMA) located more than 170 km southwest of the FD1NPS. As a result, atmospheric transport models simulating the atmospheric concentrations and surface deposition of radionuclides have large uncertainty, as well as the estimate of release rate of source terms and of internal exposure from inhalation. One year after the accident, we collected the used filter-tapes installed in Suspended Particulate Matter (SPM) monitors with beta-ray attenuation method operated by local governments in the air pollution monitoring network of eastern Japan. The SPM monitoring stations are mostly located in the urban and/or industrial area to measure the hourly mass concentration of SPM less than 10 μm in diameter for health effect due to atmospheric aerosols. By measuring radionuclides in SPM on the filter-tapes, we retrieved hourly atmospheric Cs-134 and Cs-137 concentrations during March 12-23, 2011, when atmospheric, aquatic, and terrestrial environments were seriously suffered in most of eastern Japan. Until now, we measured hourly radiocesium at around 100 SPM sites in the southern Tohoku region (ST) including the FP and in the TMA. By analysing the dataset, about 10 plumes/polluted air masses with Cs-137 concentrations higher than 10 Bq m-3 were found, and some plumes were newly detected in this study. And the spatio-temporal distributions of atmospheric Cs-137 were clearly shown for all the plumes. The east coast area of the FP where the FD1NPS was located in the centre was attacked several times by the plumes, and suffered the highest time-integrated Cs-137 concentration during the period among the ST and TMA

  7. Large scale stochastic spatio-temporal modelling with PCRaster

    Science.gov (United States)

    Karssenberg, Derek; Drost, Niels; Schmitz, Oliver; de Jong, Kor; Bierkens, Marc F. P.

    2013-04-01

    PCRaster is a software framework for building spatio-temporal models of land surface processes (http://www.pcraster.eu). Building blocks of models are spatial operations on raster maps, including a large suite of operations for water and sediment routing. These operations are available to model builders as Python functions. The software comes with Python framework classes providing control flow for spatio-temporal modelling, Monte Carlo simulation, and data assimilation (Ensemble Kalman Filter and Particle Filter). Models are built by combining the spatial operations in these framework classes. This approach enables modellers without specialist programming experience to construct large, rather complicated models, as many technical details of modelling (e.g., data storage, solving spatial operations, data assimilation algorithms) are taken care of by the PCRaster toolbox. Exploratory modelling is supported by routines for prompt, interactive visualisation of stochastic spatio-temporal data generated by the models. The high computational requirements for stochastic spatio-temporal modelling, and an increasing demand to run models over large areas at high resolution, e.g. in global hydrological modelling, require an optimal use of available, heterogeneous computing resources by the modelling framework. Current work in the context of the eWaterCycle project is on a parallel implementation of the modelling engine, capable of running on a high-performance computing infrastructure such as clusters and supercomputers. Model runs will be distributed over multiple compute nodes and multiple processors (GPUs and CPUs). Parallelization will be done by parallel execution of Monte Carlo realizations and sub regions of the modelling domain. In our approach we use multiple levels of parallelism, improving scalability considerably. On the node level we will use OpenCL, the industry standard for low-level high performance computing kernels. To combine multiple nodes we will use

  8. Stochastic spatio-temporal modelling with PCRaster Python

    Science.gov (United States)

    Karssenberg, D.; Schmitz, O.; de Jong, K.

    2012-04-01

    PCRaster Python is a software framework for building spatio-temporal models of land surface processes (Karssenberg, Schmitz, Salamon, De Jong, & Bierkens, 2010; PCRaster, 2012). Building blocks of models are spatial operations on raster maps, including a large suite of operations for water and sediment routing. These operations, developed in C++, are available to model builders as Python functions. Users create models by combining these functions in a Python script. As construction of large iterative models is often difficult and time consuming for non-specialists in programming, the software comes with a set of Python framework classes that provide control flow for static modelling, temporal modelling, stochastic modelling using Monte Carlo simulation, and data assimilation techniques including the Ensemble Kalman filter and the Particle Filter. A framework for integrating model components with different time steps and spatial discretization is currently available as a prototype (Schmitz, de Jong, & Karssenberg, in review). The software includes routines for visualisation of stochastic spatio-temporal data for prompt, interactive, visualisation of model inputs and outputs. Visualisation techniques include animated maps, time series, probability distributions, and animated maps with exceedance probabilities. The PCRaster Python software is used by researchers from a large range of disciplines, including hydrology, ecology, sedimentology, and land use change studies. Applications include global scale hydrological modelling and error propagation in large-scale land use change models. The software runs on MS Windows and Linux operating systems, and OS X (under development).

  9. Statistical methods for spatio-temporal systems

    CERN Document Server

    Finkenstadt, Barbel

    2006-01-01

    Statistical Methods for Spatio-Temporal Systems presents current statistical research issues on spatio-temporal data modeling and will promote advances in research and a greater understanding between the mechanistic and the statistical modeling communities.Contributed by leading researchers in the field, each self-contained chapter starts with an introduction of the topic and progresses to recent research results. Presenting specific examples of epidemic data of bovine tuberculosis, gastroenteric disease, and the U.K. foot-and-mouth outbreak, the first chapter uses stochastic models, such as point process models, to provide the probabilistic backbone that facilitates statistical inference from data. The next chapter discusses the critical issue of modeling random growth objects in diverse biological systems, such as bacteria colonies, tumors, and plant populations. The subsequent chapter examines data transformation tools using examples from ecology and air quality data, followed by a chapter on space-time co...

  10. Spatio-Temporal Wildland Arson Crime Functions

    OpenAIRE

    Butry, David T.; Prestemon, Jeffrey P.

    2005-01-01

    Wildland arson creates damages to structures and timber and affects the health and safety of people living in rural and wildland urban interface areas. We develop a model that incorporates temporal autocorrelations and spatial correlations in wildland arson ignitions in Florida. A Poisson autoregressive model of order p, or PAR(p) model, is estimated for six high arson Census tracts in the state for the period 1994-2001. Spatio-temporal lags of wildland arson ignitions are introduced as dummy...

  11. RFID Spatio-Temporal Data Management

    OpenAIRE

    Wang, Yonghui; Xu, Jingke; WANG Shoujin

    2013-01-01

    Radio-frequency Identification (RFID) technology promises to revolutionize the way we track items in supply chain, retail store, and asset management applications. The size and different characteristics of RFID data pose many interesting challenges in the current data management systems. In this paper, we provide a brief overview of RFID technology and highlight a few of the spatio-temporal data management challenges that we believe are suitable topics for exploratory research.

  12. Spatio-Temporal Storytelling on Twitter

    OpenAIRE

    Dos Santos Jr, Raimundo F.; Shah, Sumit; Chen, Feng; Boedihardjo, Arnold P.; Butler, Patrick; Lu, Chang-Tien; Ramakrishnan, Naren

    2013-01-01

    Social media, e.g.,Twitter, have provided us an unprecedented opportunity to observe events un-folding in real-time. The rapid pace at which situations play out on social media necessitates new tools for capturing and summarizing the spatio-temporal progression of events. This technical report describes methods for generating dynamic real-world storylines from Twitter Sources and shares the results of related experiments.

  13. RFID Spatio-Temporal Data Management

    Directory of Open Access Journals (Sweden)

    WANG Yonghui

    2013-01-01

    Full Text Available Radio-frequency Identification (RFID technology promises to revolutionize the way we track items in supply chain, retail store, and asset management applications. The size and different characteristics of RFID data pose many interesting challenges in the current data management systems. In this paper, we provide a brief overview of RFID technology and highlight a few of the spatio-temporal data management challenges that we believe are suitable topics for exploratory research.

  14. Simplified design of filter circuits

    CERN Document Server

    Lenk, John

    1999-01-01

    Simplified Design of Filter Circuits, the eighth book in this popular series, is a step-by-step guide to designing filters using off-the-shelf ICs. The book starts with the basic operating principles of filters and common applications, then moves on to describe how to design circuits by using and modifying chips available on the market today. Lenk's emphasis is on practical, simplified approaches to solving design problems.Contains practical designs using off-the-shelf ICsStraightforward, no-nonsense approachHighly illustrated with manufacturer's data sheets

  15. Video Content Description Using Fuzzy Spatio-Temporal Relations

    OpenAIRE

    Rajurkar, Archana M.; Joshi, R C; Chaudhary, Santanu; Manthalkar, Ramchandra

    2010-01-01

    We have presented a fuzzy spatio-temporal model for video content description that supports spatio-temporal queries. The proposed model is based on fuzzy directional and topological relations and fuzzy temporal relation. The problems associated with the use of crisp spatio-temporal relations were highlighted. It is shown that errors may occur in segmentation, event detection and object detection due to noisy video data and use of precise spatial relations. In order to minimize these errors fu...

  16. Target tracking based on spatio-temporal fractal error

    Science.gov (United States)

    Allen, Brian S.

    2007-04-01

    This paper presents a novel approach to target tracking using a measurement process based on spatio-temporal fractal error. Moving targets are automatically detected using one-dimensional temporal fractal error. A template derived from the two-dimensional spatial fractal error is then extracted for a designated target to allow for correlation-based template matching in subsequent frames. The outputs of both the spatial and temporal fractal error components are combined and presented as input to a kinematic tracking filter. It is shown that combining the two outputs provides improved tracking performance in the presence of noise, occlusion, other moving objects, and when the target of interest stops moving. Furthermore, reconciliation of the spatial and temporal components also provides a useful mechanism for detecting occlusion and avoiding template drift, a problem typically present in correlation-based trackers. Results are demonstrated using airborne MWIR sequences from the DARPA VIVID dataset.

  17. Pragmatic circuits signals and filters

    CERN Document Server

    Eccles, William

    2006-01-01

    Pragmatic Circuits: Signals and Filters is built around the processing of signals. Topics include spectra, a short introduction to the Fourier series, design of filters, and the properties of the Fourier transform. The focus is on signals rather than power. But the treatment is still pragmatic. For example, the author accepts the work of Butterworth and uses his results to design filters in a fairly methodical fashion. This third of three volumes finishes with a look at spectra by showing how to get a spectrum even if a signal is not periodic. The Fourier transform provides a way of dealing wi

  18. Spatio-temporal properties of letter crowding

    Science.gov (United States)

    Chung, Susana T. L.

    2016-01-01

    Crowding between adjacent letters has been investigated primarily as a spatial effect. The purpose of this study was to investigate the spatio-temporal properties of letter crowding. Specifically, we examined the systematic changes in the degradation effects in letter identification performance when adjacent letters were presented with a temporal asynchrony, as a function of letter separation and between the fovea and the periphery. We measured proportion-correct performance for identifying the middle target letter in strings of three lowercase letters at the fovea and 10° in the inferior visual field, for a range of center-to-center letter separations and a range of stimulus onset asynchronies (SOA) between the target and flanking letters (positive SOAs: target preceded flankers). As expected, the accuracy for identifying the target letters reduces with decreases in letter separation. This crowding effect shows a strong dependency on SOAs, such that crowding is maximal between 0 and ∼100 ms (depending on conditions) and diminishes for larger SOAs (positive or negative). Maximal crowding does not require the target and flanking letters to physically coexist for the entire presentation duration. Most importantly, crowding can be minimized even for closely spaced letters if there is a large temporal asynchrony between the target and flankers. The reliance of letter identification performance on SOAs and how it changes with letter separations imply that the crowding effect can be traded between space and time. Our findings are consistent with the notion that crowding should be considered as a spatio-temporal, and not simply a spatial, effect. PMID:27088895

  19. Spatio-temporal properties of letter crowding.

    Science.gov (United States)

    Chung, Susana T L

    2016-01-01

    Crowding between adjacent letters has been investigated primarily as a spatial effect. The purpose of this study was to investigate the spatio-temporal properties of letter crowding. Specifically, we examined the systematic changes in the degradation effects in letter identification performance when adjacent letters were presented with a temporal asynchrony, as a function of letter separation and between the fovea and the periphery. We measured proportion-correct performance for identifying the middle target letter in strings of three lowercase letters at the fovea and 10° in the inferior visual field, for a range of center-to-center letter separations and a range of stimulus onset asynchronies (SOA) between the target and flanking letters (positive SOAs: target preceded flankers). As expected, the accuracy for identifying the target letters reduces with decreases in letter separation. This crowding effect shows a strong dependency on SOAs, such that crowding is maximal between 0 and ∼100 ms (depending on conditions) and diminishes for larger SOAs (positive or negative). Maximal crowding does not require the target and flanking letters to physically coexist for the entire presentation duration. Most importantly, crowding can be minimized even for closely spaced letters if there is a large temporal asynchrony between the target and flankers. The reliance of letter identification performance on SOAs and how it changes with letter separations imply that the crowding effect can be traded between space and time. Our findings are consistent with the notion that crowding should be considered as a spatio-temporal, and not simply a spatial, effect.

  20. Spatio-temporal properties of letter crowding.

    Science.gov (United States)

    Chung, Susana T L

    2016-04-01

    Crowding between adjacent letters has been investigated primarily as a spatial effect. The purpose of this study was to investigate the spatio-temporal properties of letter crowding. Specifically, we examined the systematic changes in the degradation effects in letter identification performance when adjacent letters were presented with a temporal asynchrony, as a function of letter separation and between the fovea and the periphery. We measured proportion-correct performance for identifying the middle target letter in strings of three lowercase letters at the fovea and 10° in the inferior visual field, for a range of center-to-center letter separations and a range of stimulus onset asynchronies (SOA) between the target and flanking letters (positive SOAs: target preceded flankers). As expected, the accuracy for identifying the target letters reduces with decreases in letter separation. This crowding effect shows a strong dependency on SOAs, such that crowding is maximal between 0 and ∼100 ms (depending on conditions) and diminishes for larger SOAs (positive or negative). Maximal crowding does not require the target and flanking letters to physically coexist for the entire presentation duration. Most importantly, crowding can be minimized even for closely spaced letters if there is a large temporal asynchrony between the target and flankers. The reliance of letter identification performance on SOAs and how it changes with letter separations imply that the crowding effect can be traded between space and time. Our findings are consistent with the notion that crowding should be considered as a spatio-temporal, and not simply a spatial, effect. PMID:27088895

  1. Spatio-Temporal Clustering of Monitoring Network

    Science.gov (United States)

    Hussain, I.; Pilz, J.

    2009-04-01

    Pakistan has much diversity in seasonal variation of different locations. Some areas are in desserts and remain very hot and waterless, for example coastal areas are situated along the Arabian Sea and have very warm season and a little rainfall. Some areas are covered with mountains, have very low temperature and heavy rainfall; for instance Karakoram ranges. The most important variables that have an impact on the climate are temperature, precipitation, humidity, wind speed and elevation. Furthermore, it is hard to find homogeneous regions in Pakistan with respect to climate variation. Identification of homogeneous regions in Pakistan can be useful in many aspects. It can be helpful for prediction of the climate in the sub-regions and for optimizing the number of monitoring sites. In the earlier literature no one tried to identify homogeneous regions of Pakistan with respect to climate variation. There are only a few papers about spatio-temporal clustering of monitoring network. Steinhaus (1956) presented the well-known K-means clustering method. It can identify a predefined number of clusters by iteratively assigning centriods to clusters based. Castro et al. (1997) developed a genetic heuristic algorithm to solve medoids based clustering. Their method is based on genetic recombination upon random assorting recombination. The suggested method is appropriate for clustering the attributes which have genetic characteristics. Sap and Awan (2005) presented a robust weighted kernel K-means algorithm incorporating spatial constraints for clustering climate data. The proposed algorithm can effectively handle noise, outliers and auto-correlation in the spatial data, for effective and efficient data analysis by exploring patterns and structures in the data. Soltani and Modarres (2006) used hierarchical and divisive cluster analysis to categorize patterns of rainfall in Iran. They only considered rainfall at twenty-eight monitoring sites and concluded that eight clusters

  2. Time--delay autosynchronization of the spatio-temporal dynamics in resonant tunneling diodes

    OpenAIRE

    Unkelbach, J.; Amann, A; JUST, W.; Schöll, E.

    2003-01-01

    The double barrier resonant tunneling diode exhibits complex spatio-temporal patterns including low-dimensional chaos when operated in an active external circuit. We demonstrate how autosynchronization by time--delayed feedback control can be used to select and stabilize specific current density patterns in a noninvasive way. We compare the efficiency of different control schemes involving feedback in either local spatial or global degrees of freedom. The numerically obtained Floquet exponent...

  3. Robust segmentation of 4D cardiac MRI-tagged images via spatio-temporal propagation

    Science.gov (United States)

    Qian, Zhen; Huang, Xiaolei; Metaxas, Dimitris N.; Axel, Leon

    2005-04-01

    In this paper we present a robust method for segmenting and tracking cardiac contours and tags in 4D cardiac MRI tagged images via spatio-temporal propagation. Our method is based on two main techniques: the Metamorphs Segmentation for robust boundary estimation, and the tunable Gabor filter bank for tagging lines enhancement, removal and myocardium tracking. We have developed a prototype system based on the integration of these two techniques, and achieved efficient, robust segmentation and tracking with minimal human interaction.

  4. Sex & vision I: Spatio-temporal resolution

    Directory of Open Access Journals (Sweden)

    Abramov Israel

    2012-09-01

    Full Text Available Abstract Background Cerebral cortex has a very large number of testosterone receptors, which could be a basis for sex differences in sensory functions. For example, audition has clear sex differences, which are related to serum testosterone levels. Of all major sensory systems only vision has not been examined for sex differences, which is surprising because occipital lobe (primary visual projection area may have the highest density of testosterone receptors in the cortex. We have examined a basic visual function: spatial and temporal pattern resolution and acuity. Methods We tested large groups of young adults with normal vision. They were screened with a battery of standard tests that examined acuity, color vision, and stereopsis. We sampled the visual system’s contrast-sensitivity function (CSF across the entire spatio-temporal space: 6 spatial frequencies at each of 5 temporal rates. Stimuli were gratings with sinusoidal luminance profiles generated on a special-purpose computer screen; their contrast was also sinusoidally modulated in time. We measured threshold contrasts using a criterion-free (forced-choice, adaptive psychophysical method (QUEST algorithm. Also, each individual’s acuity limit was estimated by fitting his or her data with a model and extrapolating to find the spatial frequency corresponding to 100% contrast. Results At a very low temporal rate, the spatial CSF was the canonical inverted-U; but for higher temporal rates, the maxima of the spatial CSFs shifted: Observers lost sensitivity at high spatial frequencies and gained sensitivity at low frequencies; also, all the maxima of the CSFs shifted by about the same amount in spatial frequency. Main effect: there was a significant (ANOVA sex difference. Across the entire spatio-temporal domain, males were more sensitive, especially at higher spatial frequencies; similarly males had significantly better acuity at all temporal rates. Conclusion As with other sensory systems

  5. Network Analysis Using Spatio-Temporal Patterns

    Science.gov (United States)

    Miranda, Gisele H. B.; Machicao, Jeaneth; Bruno, Odemir M.

    2016-08-01

    Different network models have been proposed along the last years inspired by real-world topologies. The characterization of these models implies the understanding of the underlying network phenomena, which accounts structural and dynamic properties. Several mathematical tools can be employed to characterize such properties as Cellular Automata (CA), which can be defined as dynamical systems of discrete nature composed by spatially distributed units governed by deterministic rules. In this paper, we proposed a method based on the modeling of one specific CA over distinct network topologies in order to perform the classification of the network model. The proposed methodology consists in the modeling of a binary totalistic CA over a network. The transition function that governs each CA cell is based on the density of living neighbors. Secondly, the distribution of the Shannon entropy is obtained from the evolved spatio-temporal pattern of the referred CA and used as a network descriptor. The experiments were performed using a dataset composed of four different types of networks: random, small-world, scale-free and geographical. We also used cross-validation for training purposes. We evaluated the accuracy of classification as a function of the initial number of living neighbors, and, also, as a function of a threshold parameter related to the density of living neighbors. The results show high accuracy values in distinguishing among the network models which demonstrates the feasibility of the proposed method.

  6. Spatio-temporal problems of locomotion control

    International Nuclear Information System (INIS)

    The problem of the spatio-temporal construction of legged movements involves structural freedoms due to the multi-link structure of the extremities, kinematic freedoms of the stepping cycle, and interextremity coordination freedoms, whose purposive organization is established by means of appropriate synergies, i.e. additional functional links the brain's control system forms. The main focus of attention in this work is on the kinematic and coordination synergies of the legged movements of humans and animals. The comparative historical analysis of experimental data and modelling metaphors concentrates on obtaining a unified description, whereas the ultimate mathematical metaphor reduces to space-time geometry, with base step synergies as its invariants. Thus, the concept of a synergetic organization for biomechanical movement freedoms is transformed to the geochronometry concept, actually a modification of Minkowskian geometry. To determine the spectrum of possible geochronometries, the consequences of a generalized 'postulate of a constant speed of light' are studied and different models of wave chronometers compared. (reviews of topical problems)

  7. Spatio-temporal diffusion of dynamic PET images

    Energy Technology Data Exchange (ETDEWEB)

    Tauber, C; Chalon, S; Guilloteau, D [Inserm U930, CNRS ERL3106, Universite Francois Rabelais, Tours (France); Stute, S; Buvat, I [IMNC, IN2P3, UMR 8165 CNRS-Paris 7 and Paris 11 Universities, Orsay (France); Chau, M [ASA-Advanced Solutions Accelerator, Montpellier (France); Spiteri, P, E-mail: clovis.tauber@univ-tours.fr [IRIT-ENSEEIHT, UMR CNRS 5505, Toulouse (France)

    2011-10-21

    Positron emission tomography (PET) images are corrupted by noise. This is especially true in dynamic PET imaging where short frames are required to capture the peak of activity concentration after the radiotracer injection. High noise results in a possible bias in quantification, as the compartmental models used to estimate the kinetic parameters are sensitive to noise. This paper describes a new post-reconstruction filter to increase the signal-to-noise ratio in dynamic PET imaging. It consists in a spatio-temporal robust diffusion of the 4D image based on the time activity curve (TAC) in each voxel. It reduces the noise in homogeneous areas while preserving the distinct kinetics in regions of interest corresponding to different underlying physiological processes. Neither anatomical priors nor the kinetic model are required. We propose an automatic selection of the scale parameter involved in the diffusion process based on a robust statistical analysis of the distances between TACs. The method is evaluated using Monte Carlo simulations of brain activity distributions. We demonstrate the usefulness of the method and its superior performance over two other post-reconstruction spatial and temporal filters. Our simulations suggest that the proposed method can be used to significantly increase the signal-to-noise ratio in dynamic PET imaging.

  8. A Content Management System for Spatio-Temporal Data: Tadaima

    OpenAIRE

    Leano, Vincenza Anna

    2013-01-01

    This thesis focuses on spatio-temporal data modeling and visualization with an application case of study in the Cultural Heritage field. Spatio-temporal data visualization assumes an important role presenting data to users. Offering a synchronized view on three dimensions of data (i.e. descriptive, temporal and spatial) helps users in their knowledge discovery process. In Cultural Heritage field, time assumes an important role to explore data. The same timeline could be viewed in differen...

  9. Vehicle Trajectory Estimation Using Spatio-Temporal MCMC

    Directory of Open Access Journals (Sweden)

    Francois Bardet

    2010-01-01

    Full Text Available This paper presents an algorithm for modeling and tracking vehicles in video sequences within one integrated framework. Most of the solutions are based on sequential methods that make inference according to current information. In contrast, we propose a deferred logical inference method that makes a decision according to a sequence of observations, thus processing a spatio-temporal search on the whole trajectory. One of the drawbacks of deferred logical inference methods is that the solution space of hypotheses grows exponentially related to the depth of observation. Our approach takes into account both the kinematic model of the vehicle and a driver behavior model in order to reduce the space of the solutions. The resulting proposed state model explains the trajectory with only 11 parameters. The solution space is then sampled with a Markov Chain Monte Carlo (MCMC that uses a model-driven proposal distribution in order to control random walk behavior. We demonstrate our method on real video sequences from which we have ground truth provided by a RTK GPS (Real-Time Kinematic GPS. Experimental results show that the proposed algorithm outperforms a sequential inference solution (particle filter.

  10. Enhancing Spatio-Temporal Identity: States of Existence and Presence

    Directory of Open Access Journals (Sweden)

    Pierre Hallot

    2016-05-01

    Full Text Available This work presents a new approach that aims to characterize the spatio-temporal relationships that exist between geographical objects that are absent or non-existent at the moment of analysis. First, we would like to propose a formal analysis of the spatio-temporal states of presence and existence of a geographical object. We will then use a combination of these states in order to define a set of life and motion configurations. The model developed then serves as a formal basis for the realization of a series of spatio-temporal queries based on an analysis of patterns in the succession of spatio-temporal states. The entire approach is then demonstrated by using the example of the organization of a scientific conference by defining the spatio-temporal relationships between the conference participants. The research methodology is finally compared with a real dataset taken from a geolocalized social network to show the efficiency of this type of management.

  11. Second-order analysis of structured inhomogeneous spatio-temporal point processes

    DEFF Research Database (Denmark)

    Møller, Jesper; Ghorbani, Mohammad

    Statistical methodology for spatio-temporal point processes is in its infancy. We consider second-order analysis based on pair correlation functions and K-functions for first general inhomogeneous spatio-temporal point processes and second inhomogeneous spatio-temporal Cox processes. Assuming...... spatio-temporal separability of the intensity function, we clarify different meanings of second-order spatio-temporal separability. One is second-order spatio-temporal independence and relates e.g. to log-Gaussian Cox processes with an additive covariance structure of the underlying spatio......-temporal Gaussian process. Another concerns shot-noise Cox processes with a separable spatio-temporal covariance density. We propose diagnostic procedures for checking hypotheses of second-order spatio-temporal separability, which we apply on simulated and real data (the UK 2001 epidemic foot and mouth disease data)....

  12. Reaction diffusion equation with spatio-temporal delay

    Science.gov (United States)

    Zhao, Zhihong; Rong, Erhua

    2014-07-01

    We investigate reaction-diffusion equation with spatio-temporal delays, the global existence, uniqueness and asymptotic behavior of solutions for which in relation to constant steady-state solution, included in the region of attraction of a stable steady solution. It is shown that if the delay reaction function satisfies some conditions and the system possesses a pair of upper and lower solutions then there exists a unique global solution. In terms of the maximal and minimal constant solutions of the corresponding steady-state problem, we get the asymptotic stability of reaction-diffusion equation with spatio-temporal delay. Applying this theory to Lotka-Volterra model with spatio-temporal delay, we get the global solution asymptotically tend to the steady-state problem's steady-state solution.

  13. Spatio-Temporal Data Mining for Location-Based Services

    DEFF Research Database (Denmark)

    Gidofalvi, Gyozo

    . The objectives of the presented thesis are three-fold. First, to extend popular data mining methods to the spatio-temporal domain. Second, to demonstrate the usefulness of the extended methods and the derived knowledge in promising LBS examples. Finally, to eliminate privacy concerns in connection with spatio......-temporal data mining by devising systems for privacy-preserving location data collection and mining.......Location-Based Services (LBS) are continuously gaining popularity. Innovative LBSes integrate knowledge about the users into the service. Such knowledge can be derived by analyzing the location data of users. Such data contain two unique dimensions, space and time, which need to be analyzed...

  14. Advaced Spatio-Temporal Thermal Analysis of Electronic Systems

    Directory of Open Access Journals (Sweden)

    Miroslav Hrianka

    2003-01-01

    Full Text Available The article gives a brief review the of diagnostics and analysis possibilities by a spatio-temporal approach into electronic system in infrared bandwidth. The two dimensional image grabbed by the thermo vision camera provides information about the surface temperature distribution of an electronic system. The main idea is based on the analysis of the object which consists of a temporal sequence of a spatial thermal images. Advanced analysis is achieved by morphological image gradient spatio-temporal model: The mentioned method provides a total temperature system evaluation as well as it allows separate analysis in the chosen determined temperature area.

  15. Statistical analysis of spatial and spatio-temporal point patterns

    CERN Document Server

    Diggle, Peter J

    2013-01-01

    Written by a prominent statistician and author, the first edition of this bestseller broke new ground in the then emerging subject of spatial statistics with its coverage of spatial point patterns. Retaining all the material from the second edition and adding substantial new material, Statistical Analysis of Spatial and Spatio-Temporal Point Patterns, Third Edition presents models and statistical methods for analyzing spatially referenced point process data. Reflected in the title, this third edition now covers spatio-temporal point patterns. It explores the methodological developments from th

  16. Spatio-temporal data analytics for wind energy integration

    CERN Document Server

    Yang, Lei; Zhang, Junshan

    2014-01-01

    This SpringerBrief presents spatio-temporal data analytics for wind energy integration using stochastic modeling and optimization methods. It explores techniques for efficiently integrating renewable energy generation into bulk power grids. The operational challenges of wind, and its variability are carefully examined. A spatio-temporal analysis approach enables the authors to develop Markov-chain-based short-term forecasts of wind farm power generation. To deal with the wind ramp dynamics, a support vector machine enhanced Markov model is introduced. The stochastic optimization of economic di

  17. Spatio-temporal modeling of nonlinear distributed parameter systems

    CERN Document Server

    Li, Han-Xiong

    2011-01-01

    The purpose of this volume is to provide a brief review of the previous work on model reduction and identifi cation of distributed parameter systems (DPS), and develop new spatio-temporal models and their relevant identifi cation approaches. In this book, a systematic overview and classifi cation on the modeling of DPS is presented fi rst, which includes model reduction, parameter estimation and system identifi cation. Next, a class of block-oriented nonlinear systems in traditional lumped parameter systems (LPS) is extended to DPS, which results in the spatio-temporal Wiener and Hammerstein s

  18. Pattern formation in semiconductors: control of spatio-temporal dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Schoell, E. [Institut fuer Theoretische Physik, Technische Universitaet Berlin, Hardenbergstr. 36, 10623 Berlin (Germany)

    2004-08-01

    Semiconductors driven far from thermodynamic equilibrium by an applied dc voltage exhibit a variety of spatio-temporal electronic instabilities including complex and chaotic scenarios. We study stabilization of chaotic spatio-temporal patterns in spatially extended semiconductor models by time delayed feedback control. Different control schemes, e.g., a diagonal control matrix, or global control, or combinations of both, are compared. Specifically, we use two models of semiconductor nanostructures which are of particular current interest: (i) superlattice, (ii) double-barrier resonant-tunneling diode. (Abstract Copyright [2004], Wiley Periodicals, Inc.)

  19. Spatio-temporal databases complex motion pattern queries

    CERN Document Server

    Vieira, Marcos R

    2013-01-01

    This brief presents several new query processing techniques, called complex motion pattern queries, specifically designed for very large spatio-temporal databases of moving objects. The brief begins with the definition of flexible pattern queries, which are powerful because of the integration of variables and motion patterns. This is followed by a summary of the expressive power of patterns and flexibility of pattern queries. The brief then present the Spatio-Temporal Pattern System (STPS) and density-based pattern queries. STPS databases contain millions of records with information about mobi

  20. Modelling spatio-temporal interactions within the cell

    Indian Academy of Sciences (India)

    Padmini Rangamani; Ravi Iyengar

    2007-01-01

    Biological phenomena at the cellular level can be represented by various types of mathematical formulations. Such representations allow us to carry out numerical simulations that provide mechanistic insights into complex behaviours of biological systems and also generate hypotheses that can be experimentally tested. Currently, we are particularly interested in spatio-temporal representations of dynamic cellular phenomena and how such models can be used to understand biological specificity in functional responses. This review describes the capability and limitations of the approaches used to study spatio-temporal dynamics of cell signalling components.

  1. Spatio-Temporal Equalizer for a Receiving-Antenna Feed Array

    Science.gov (United States)

    Mukai, Ryan; Lee, Dennis; Vilnrotter, Victor

    2010-01-01

    A spatio-temporal equalizer has been conceived as an improved means of suppressing multipath effects in the reception of aeronautical telemetry signals, and may be adaptable to radar and aeronautical communication applications as well. This equalizer would be an integral part of a system that would also include a seven-element planar array of receiving feed horns centered at the focal point of a paraboloidal antenna that would be nominally aimed at or near the aircraft that would be the source of the signal that one seeks to receive (see Figure 1). This spatio-temporal equalizer would consist mostly of a bank of seven adaptive finite-impulse-response (FIR) filters one for each element in the array - and the outputs of the filters would be summed (see Figure 2). The combination of the spatial diversity of the feedhorn array and the temporal diversity of the filter bank would afford better multipath-suppression performance than is achievable by means of temporal equalization alone. The seven-element feed array would supplant the single feed horn used in a conventional paraboloidal ground telemetry-receiving antenna. The radio-frequency telemetry signals re ceiv ed by the seven elements of the array would be digitized, converted to complex baseband form, and sent to the FIR filter bank, which would adapt itself in real time to enable reception of telemetry at a low bit error rate, even in the presence of multipath of the type found at many flight test ranges.

  2. Microwave filters and circuits contributions from Japan

    CERN Document Server

    Matsumoto, Akio

    1970-01-01

    Microwave Filters and Circuits: Contributions from Japan covers ideas and novel circuits used to design microwave filter that have been developed in Japan, as well as network theory into the field of microwave transmission networks. The book discusses the general properties and synthesis of transmission-line networks; transmission-line filters on the image-parameter basis; and experimental results on a class of transmission-line filter constructed only with commensurate TEM lossless transmission lines. The text describes lines constants, approximation problems in transmission-line networks, as

  3. Robust visual tracking with dual spatio-temporal context trackers

    Science.gov (United States)

    Sun, Shiyan; Zhang, Hong; Yuan, Ding

    2015-12-01

    Visual tracking is a challenging problem in computer vision. Recent years, significant numbers of trackers have been proposed. Among these trackers, tracking with dense spatio-temporal context has been proved to be an efficient and accurate method. Other than trackers with online trained classifier that struggle to meet the requirement of real-time tracking task, a tracker with spatio-temporal context can run at hundreds of frames per second with Fast Fourier Transform (FFT). Nevertheless, the performance of the tracker with Spatio-temporal context relies heavily on the learning rate of the context, which restricts the robustness of the tracker. In this paper, we proposed a tracking method with dual spatio-temporal context trackers that hold different learning rate during tracking. The tracker with high learning rate could track the target smoothly when the appearance of target changes, while the tracker with low learning rate could percepts the occlusion occurring and continues to track when the target starts to emerge again. To find the target among the candidates from these two trackers, we adopt Normalized Correlation Coefficient (NCC) to evaluate the confidence of each sample. Experimental results show that the proposed algorithm performs robustly against several state-of-the-art tracking methods.

  4. Uncovering spatio-temporal patterns in environmental data

    NARCIS (Netherlands)

    Wachowicz, M.

    2002-01-01

    The integration of data mining and geographic visualization techniques facilitates the identification and the interpretation of spatio-temporal patterns – a process recognized as knowledge construction. Knowledge construction is a dynamic process of manipulating `data' to find, relate, and interpret

  5. On spatio-temporal Lévy based Cox processes

    DEFF Research Database (Denmark)

    Prokesova, Michaela; Hellmund, Gunnar; Jensen, Eva Bjørn Vedel

    2006-01-01

    The paper discusses a new class of models for spatio-temporal Cox point processes. In these models, the driving field is defined by means of an integral of a weight function with respect to a Lévy basis. The relations to other Cox process models studied previously are discussed and formulas for t...

  6. Simultaneous spatio-temporal focusing for tissue manipulation

    Directory of Open Access Journals (Sweden)

    Squier J.

    2013-11-01

    Full Text Available Simultaneous spatiotemporal focusing (SSTF is applied to lens tissue and compared directly with standard femtosecond micromachining of the tissue at the same numerical aperture. Third harmonic generation imaging is used for spatio-temporal characterization of the processing conditions obtained with both a standard and SSTF focus.

  7. Kernel Averaged Predictors for Spatio-Temporal Regression Models.

    Science.gov (United States)

    Heaton, Matthew J; Gelfand, Alan E

    2012-12-01

    In applications where covariates and responses are observed across space and time, a common goal is to quantify the effect of a change in the covariates on the response while adequately accounting for the spatio-temporal structure of the observations. The most common approach for building such a model is to confine the relationship between a covariate and response variable to a single spatio-temporal location. However, oftentimes the relationship between the response and predictors may extend across space and time. In other words, the response may be affected by levels of predictors in spatio-temporal proximity to the response location. Here, a flexible modeling framework is proposed to capture such spatial and temporal lagged effects between a predictor and a response. Specifically, kernel functions are used to weight a spatio-temporal covariate surface in a regression model for the response. The kernels are assumed to be parametric and non-stationary with the data informing the parameter values of the kernel. The methodology is illustrated on simulated data as well as a physical data set of ozone concentrations to be explained by temperature. PMID:24010051

  8. Cubic map algebra functions for spatio-temporal analysis

    Science.gov (United States)

    Mennis, J.; Viger, R.; Tomlin, C.D.

    2005-01-01

    We propose an extension of map algebra to three dimensions for spatio-temporal data handling. This approach yields a new class of map algebra functions that we call "cube functions." Whereas conventional map algebra functions operate on data layers representing two-dimensional space, cube functions operate on data cubes representing two-dimensional space over a third-dimensional period of time. We describe the prototype implementation of a spatio-temporal data structure and selected cube function versions of conventional local, focal, and zonal map algebra functions. The utility of cube functions is demonstrated through a case study analyzing the spatio-temporal variability of remotely sensed, southeastern U.S. vegetation character over various land covers and during different El Nin??o/Southern Oscillation (ENSO) phases. Like conventional map algebra, the application of cube functions may demand significant data preprocessing when integrating diverse data sets, and are subject to limitations related to data storage and algorithm performance. Solutions to these issues include extending data compression and computing strategies for calculations on very large data volumes to spatio-temporal data handling.

  9. Large scale stochastic spatio-temporal modelling with PCRaster

    NARCIS (Netherlands)

    Karssenberg, D.J.; Drost, N.; Schmitz, O.; Jong, K. de; Bierkens, M.F.P.

    2013-01-01

    PCRaster is a software framework for building spatio-temporal models of land surface processes (http://www.pcraster.eu). Building blocks of models are spatial operations on raster maps, including a large suite of operations for water and sediment routing. These operations are available to model buil

  10. Effective and efficient analysis of spatio-temporal data

    Science.gov (United States)

    Zhang, Zhongnan

    Spatio-temporal data mining, i.e., mining knowledge from large amount of spatio-temporal data, is a highly demanding field because huge amounts of spatio-temporal data have been collected in various applications, ranging from remote sensing, to geographical information systems (GIS), computer cartography, environmental assessment and planning, etc. The collection data far exceeded human's ability to analyze which make it crucial to develop analysis tools. Recent studies on data mining have extended to the scope of data mining from relational and transactional datasets to spatial and temporal datasets. Among the various forms of spatio-temporal data, remote sensing images play an important role, due to the growing wide-spreading of outer space satellites. In this dissertation, we proposed two approaches to analyze the remote sensing data. The first one is about applying association rules mining onto images processing. Each image was divided into a number of image blocks. We built a spatial relationship for these blocks during the dividing process. This made a large number of images into a spatio-temporal dataset since each image was shot in time-series. The second one implemented co-occurrence patterns discovery from these images. The generated patterns represent subsets of spatial features that are located together in space and time. A weather analysis is composed of individual analysis of several meteorological variables. These variables include temperature, pressure, dew point, wind, clouds, visibility and so on. Local-scale models provide detailed analysis and forecasts of meteorological phenomena ranging from a few kilometers to about 100 kilometers in size. When some of above meteorological variables have some special change tendency, some kind of severe weather will happen in most cases. Using the discovery of association rules, we found that some special meteorological variables' changing has tight relation with some severe weather situation that will happen

  11. Field scale spatio-temporal soil moisture variability for trafficability and crop water availability

    Science.gov (United States)

    Carranza, Coleen; van der Ploeg, Martine; Ritsema, Coen

    2016-04-01

    Spatio-temporal patterns of soil moisture have been studied mostly for inputs in land surface models for weather and climate predictions. Remote sensing techniques for estimation of soil moisture have been explored because of the good spatial coverage at different scales. Current available satellite data provide surface soil moisture as microwave systems only measure soil moisture content up to 5cm soil depth. The OWAS1S project will focus on estimation of soil moisture from freely available Sentinel-1 datasets for operational water management in agricultural areas. As part of the project, it is essential to develop spatio-temporal methods to estimate root zone soil moisture from surface soil moisture. This will be used for crop water availability and trafficability in selected agricultural fields in the Netherlands. A network of single capacitance sensors installed per field will provide continuous measurements of soil moisture in the study area. Ground penetrating radar will be used to measure soil moisture variability within a single field for different time periods. During wetter months, optimal conditions for traffic will be assessed using simultaneous soil strength and soil moisture measurements. Towards water deficit periods, focus is on the relation (or the lack thereof) between surface soil moisture and root zone soil moisture to determine the amount of water for crops. Spatio-temporal distribution will determine important physical controls for surface and root zone soil moisture and provide insights for root-zone soil moisture. Existing models for field scale soil-water balance and data assimilation methods (e.g. Kalman filter) will be combined to estimate root zone soil moisture. Furthermore, effects of root development on soil structure and soil hydraulic properties and subsequent effects on trafficability and crop water availability will be investigated. This research project has recently started, therefore we want to present methods and framework of

  12. Spatio-temporal analysis of Salmonella surveillance data in Thailand

    DEFF Research Database (Denmark)

    Coutinho Calado Domingues, Ana Rita; Vieira, Antonio; Hendriksen, Rene S.;

    2014-01-01

    isolates from Thailand was analysed. Data was grouped into human and non-human categories and the analysis was performed for the top five occurring serovars for each year of the study period. A total 91 human and 39 non-human significant spatio-temporal clusters were observed, accounting for 11% and 16......This study evaluates the usefulness of spatio-temporal statistical tools to detect outbreaks using routine surveillance data where limited epidemiological information is available. A dataset from 2002 to 2007 containing information regarding date, origin, source and serotype of 29 586 Salmonella......% of the isolates, respectively. Serovar-specific associations between human and non-human clusters were also evaluated. Results show that these statistical tools can provide information for use in outbreak prevention and detection, in countries where only limited data is available. Moreover, it is suggested...

  13. The spatio-temporal spectrum of turbulent flows

    CERN Document Server

    di Leoni, P Clark; Mininni, P D

    2015-01-01

    Identification and extraction of vortical structures and of waves in a disorganized flow is a mayor challegen in the study of turbulence. We present a study of the spatio-temporal behavior of turbulent flows in the presence of different restitutive forces. We show how to compute and analyze the spatio-temporal spectrum from data stemming from numerical simulations and from laboratory experiments. Four cases are considered: homogeneous and isotropic turbulence, rotating turbulence, stratified turbulence, and water wave turbulence. For homogeneous and isotropic turbulence, the spectrum allows identification of random sweeping. For rotating and for stratified turbulence, the spectrum allows identification of the waves, quantification of the energy in the waves and in the turbulent eddies, and identification of physical mechanisms such as Doppler shift and wave absorption in critical layers. Finally, in water wave turbulence the spectrum shows a transition from gravity-capillary waves to bound waves as the amplit...

  14. Estimating spatio-temporal dynamics of size-structured populations

    DEFF Research Database (Denmark)

    Kristensen, Kasper; Thygesen, Uffe Høgsbro; Andersen, Ken Haste;

    2014-01-01

    Spatial distributions of structured populations are usually estimated by fitting abundance surfaces for each stage and at each point of time separately, ignoring correlations that emerge from growth of individuals. Here, we present a statistical model that combines spatio-temporal correlations...... of individuals with similar size. The model estimates growth, mortality and reproduction, after which any aspect of size-structure, spatio-temporal population dynamics, as well as the sampling process can be probed. This is illustrated by two applications: 1) tracking the spatial movements of a single cohort...... with simple stock dynamics, to estimate simultaneously how size distributions and spatial distributions develop in time. We demonstrate the method for a cod population sampled by trawl surveys. Particular attention is paid to correlation between size classes within each trawl haul due to clustering...

  15. Spatial and spatio-temporal bayesian models with R - INLA

    CERN Document Server

    Blangiardo, Marta

    2015-01-01

    Dedication iiiPreface ix1 Introduction 11.1 Why spatial and spatio-temporal statistics? 11.2 Why do we use Bayesian methods for modelling spatial and spatio-temporal structures? 21.3 Why INLA? 31.4 Datasets 32 Introduction to 212.1 The language 212.2 objects 222.3 Data and session management 342.4 Packages 352.5 Programming in 362.6 Basic statistical analysis with 393 Introduction to Bayesian Methods 533.1 Bayesian Philosophy 533.2 Basic Probability Elements 573.3 Bayes Theorem 623.4 Prior and Posterior Distributions 643.5 Working with the Posterior Distribution 663.6 Choosing the Prior Distr

  16. Comprehensive Retrieval of Spatio-temporal Variations in Atmospheric Radionuclides just after the Fukushima Accident by Analyzing Filter-tapes of Operational Air Pollution Monitoring Stations in Eastern Japan

    Science.gov (United States)

    Tsuruta, H.; Oura, Y.; Ebihara, M.; Ohara, T.; Nakajima, T.

    2015-12-01

    After the Fukushima Daiichi Nuclear Power Station (FD1NPS) accident on March 11, 2011, many datasets have been available of deposition density of radionuclides in soils in eastern Japan. By contrast, no time-series data of atmospheric radionuclides has been measured in the Fukushima prefecture (FP), although very limited data is available in the Tokyo metropolitan area (TMA) located more than 170 km southwest of the FD1NPS. As a result, atmospheric transport models simulating the atmospheric concentrations and surface deposition of radionuclides have large uncertainty, as well as the estimate of release rate of source terms and of internal exposure from inhalation. One year after the accident, we collected the used filter-tapes installed in Suspended Particulate Matter (SPM) monitors with beta-ray attenuation method operated by local governments in the air pollution monitoring network of eastern Japan. By measuring radionuclides in SPM on the filter-tapes, we retrieved hourly atmospheric Cs-134 and Cs-137 concentrations during March 12-23, 2011, when atmospheric, aquatic, and terrestrial environments were seriously suffered in most of eastern Japan. Until now, we measured hourly radiocesium at around 100 SPM sites in the southern Tohoku region (ST) including the FP and in the TMA. By analysing the dataset, nine major plumes with Cs-137 concentrations higher than 10 Bq m-3 were found, and some plumes were newly found in this study. A local area of relatively high Cs-137 deposition density in the TMA by precipitation on the morning of March 21, was consistent with an area where the time-integrated atmospheric Cs-137 concentrations were also high due to the transport of a plume on the morning of March 21. In the FP, however, the correlation was not so clear. High radionuclides trapped in a cloud layer might be transported to the ST with relatively high Cs-137 deposition densities, because the atmospheric Cs-137 concentrations were under the detection limit.

  17. Spatio-Temporal Patterns for a Generalized Innovation Diffusion Model

    OpenAIRE

    Hashemi, Fariba; Hongler, Max-Olivier; Gallay, Olivier

    2011-01-01

    We construct a model of innovation diffusion that incorporates a spatial component into a classical imitation-innovation dynamics first introduced by F. Bass. Relevant for situations where the imitation process explicitly depends on the spatial proximity between agents, the resulting nonlinear field dynamics is exactly solvable. As expected for nonlinear collective dynamics, the imitation mechanism generates spatio-temporal patterns, possessing here the remarkable feature that they can be exp...

  18. Groundwater management in land administration: a spatio-temporal perspective

    OpenAIRE

    Ghawana, T.; Hespanha, J.P.; J.A. Zevenbergen; Van Oosterom, P.J.M.

    2010-01-01

    Although the use of land and water is intertwined, specifics for groundwater management are not effectively dealt with in the laws and other institutional mechanisms related to land. Provisions for groundwater aspects in land management are there, but with a focus on the land itself. Land rights and restrictions are more or less static, lacking enough flexibility to incorporate the relatively short interval spatio-temporal dynamics of groundwater resources in the land management and regulatio...

  19. Spatio-temporal video autoencoder with differentiable memory

    OpenAIRE

    Patraucean, Viorica; Handa, Ankur; Cipolla, Roberto

    2015-01-01

    We describe a new spatio-temporal video autoencoder, based on a classic spatial image autoencoder and a novel nested temporal autoencoder. The temporal encoder is represented by a differentiable visual memory composed of convolutional long short-term memory (LSTM) cells that integrate changes over time. Here we target motion changes and use as temporal decoder a robust optical flow prediction module together with an image sampler serving as built-in feedback loop. The architecture is end-to-e...

  20. Spatio-temporal càdlàg functional marked point processes: Unifying spatio-temporal frameworks

    NARCIS (Netherlands)

    Cronie, O.J.A.; Mateu, J.

    2014-01-01

    This paper defines the class of càdlàg functional marked point processes (CFMPPs). These are (spatio-temporal) point processes marked by random elements which take values in a càdlàg function space, i.e. the marks are given by càdlàg stochastic processes. We generalise notions of marked (spatio-temp

  1. Equivalent circuit analysis of terahertz metamaterial filters

    KAUST Repository

    Zhang, Xueqian

    2011-01-01

    An equivalent circuit model for the analysis and design of terahertz (THz) metamaterial filters is presented. The proposed model, derived based on LMC equivalent circuits, takes into account the detailed geometrical parameters and the presence of a dielectric substrate with the existing analytic expressions for self-inductance, mutual inductance, and capacitance. The model is in good agreement with the experimental measurements and full-wave simulations. Exploiting the circuit model has made it possible to predict accurately the resonance frequency of the proposed structures and thus, quick and accurate process of designing THz device from artificial metamaterials is offered. ©2011 Chinese Optics Letters.

  2. Spatio-temporal evolution of Beijing 2003 SARS epidemic

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Studying spatio-temporal evolution of epidemics can uncover important aspects of interaction among people, infectious diseases, and the environment, providing useful insights and modeling support to facilitate public health response and possibly prevention measures. This paper presents an empirical spatio-temporal analysis of epidemiological data concerning 2321 SARS-infected patients in Beijing in 2003. We mapped the SARS morbidity data with the spatial data resolution at the level of street and township. Two smoothing methods, Bayesian adjustment and spatial smoothing, were applied to identify the spatial risks and spatial transmission trends. Furthermore, we explored various spatial patterns and spatio-temporal evolution of Beijing 2003 SARS epidemic using spatial statistics such as Moran’s I and LISA. Part of this study is targeted at evaluating the effectiveness of public health control measures implemented during the SARS epidemic. The main findings are as follows. (1) The diffusion speed of SARS in the northwest-southeast direction is weaker than that in northeast-southwest direction. (2) SARS’s spread risk is positively spatially associated and the strength of this spatial association has experienced changes from weak to strong and then back to weak during the lifetime of the Beijing SARS epidemic. (3) Two spatial clusters of disease cases are identified: one in the city center and the other in the eastern suburban area. These two clusters followed different evolutionary paths but interacted with each other as well. (4) Although the government missed the opportunity to contain the early outbreak of SARS in March 2003, the response strategies implemented after the mid of April were effective. These response measures not only controlled the growth of the disease cases, but also mitigated the spatial diffusion.

  3. Assessing global vegetation activity using spatio-temporal Bayesian modelling

    Science.gov (United States)

    Mulder, Vera L.; van Eck, Christel M.; Friedlingstein, Pierre; Regnier, Pierre A. G.

    2016-04-01

    This work demonstrates the potential of modelling vegetation activity using a hierarchical Bayesian spatio-temporal model. This approach allows modelling changes in vegetation and climate simultaneous in space and time. Changes of vegetation activity such as phenology are modelled as a dynamic process depending on climate variability in both space and time. Additionally, differences in observed vegetation status can be contributed to other abiotic ecosystem properties, e.g. soil and terrain properties. Although these properties do not change in time, they do change in space and may provide valuable information in addition to the climate dynamics. The spatio-temporal Bayesian models were calibrated at a regional scale because the local trends in space and time can be better captured by the model. The regional subsets were defined according to the SREX segmentation, as defined by the IPCC. Each region is considered being relatively homogeneous in terms of large-scale climate and biomes, still capturing small-scale (grid-cell level) variability. Modelling within these regions is hence expected to be less uncertain due to the absence of these large-scale patterns, compared to a global approach. This overall modelling approach allows the comparison of model behavior for the different regions and may provide insights on the main dynamic processes driving the interaction between vegetation and climate within different regions. The data employed in this study encompasses the global datasets for soil properties (SoilGrids), terrain properties (Global Relief Model based on SRTM DEM and ETOPO), monthly time series of satellite-derived vegetation indices (GIMMS NDVI3g) and climate variables (Princeton Meteorological Forcing Dataset). The findings proved the potential of a spatio-temporal Bayesian modelling approach for assessing vegetation dynamics, at a regional scale. The observed interrelationships of the employed data and the different spatial and temporal trends support

  4. Pattern formations in chaotic spatio-temporal systems

    Indian Academy of Sciences (India)

    Ying Zhang; Shihong Wang; Jinhua Xiao; Hilda A Cerdeira; S Chen; Gang Hu

    2005-06-01

    Pattern formations in chaotic spatio-temporal systems modelled by coupled chaotic oscillators are investigated. We focus on various symmetry breakings and different kinds of chaos synchronization–desynchronization transitions, which lead to certain types of spontaneous spatial orderings and the emergence of some typical ordered patterns, such as rotating wave patterns with splay phase ordering (orientational symmetry breaking) and partially synchronous standing wave patterns with in-phase ordering (translational symmetry breaking). General pictures of the global behaviors of pattern formations and transitions in coupled chaotic oscillators are provided.

  5. Spatio-temporal patterns of influenza B proportions

    OpenAIRE

    He, Daihai; Chiu, Alice PY; Lin, Qianying; Yu, Duo

    2016-01-01

    We study the spatio-temporal patterns of the proportion of influenza B out of laboratory confirmations of both influenza A and B, with data from 139 countries and regions downloaded from the FluNet compiled by the World Health Organization, from January 2006 to October 2015, excluding 2009. We restricted our analysis to 34 countries that reported more than 2000 confirmations for each of types A and B over the study period. We find that Pearson's correlation is 0.669 between effective distance...

  6. Sparse Spatio-temporal Inference of Electromagnetic Brain Sources

    DEFF Research Database (Denmark)

    Stahlhut, Carsten; Attias, Hagai Thomas; Wipf, David;

    2010-01-01

    involves solving an inverse problem that is severely underdetermined. Bayesian graphical models provide a powerful means of incorporating prior assumptions that narrow the solution space and lead to tractable posterior distributions over the unknown sources given the observed data. In particular...... on the notion of automatic relevance determination (ARD) to express the unknown sources via a small collection of spatio-temporal basis functions. Experiments with several data sets provide evidence that the proposed model leads to improved source estimates. The underlying methodology is also well-suited...

  7. Spatio-temporal light shaping for parallel nano-biophotonics

    DEFF Research Database (Denmark)

    Glückstad, Jesper; Palima, Darwin

    of geometry, where the wavelength of light sets a lower limit in how small we can shape light’s thickness and width. This light shaping process suggests a natural marriage of spatial and temporal shaping (i.e., spatio-temporal modulation). However, the spatial and temporal light sciences have traditionally...... developed Generalized Phase Contrast (GPC) [1] for diverse spatial light-shaping applications. We can dynamically shape light to interact with microscopic matter and we have contributed to the field of optical micromanipulation [2]. Beyond microscopy, we can apply non-contact forces onto biological cells...

  8. Closure Properties of Classes of Spatio-Temporal Objects for Boolean Set Operations

    OpenAIRE

    Haesevoets, Sofie; Kuijpers, Bart

    2000-01-01

    We study a model for spatio-temporal objects, introduced by Chomicki and Revesz, in which spatio-temporal data is specified by a spatial reference object together with a geometric transformation that determines the movement of the reference object in time. We give complete results concerning closure under Boolean set operators for the different classes of spatio-temporal objects introduced by these authors (In particular, we also answer a conjecture by Chomicki and Revesz negatively). Since o...

  9. Unsupervised Spatio-Temporal Segmentation for Extracting Moving Objects in Video Sequences

    Institute of Scientific and Technical Information of China (English)

    LI Ren-jie; YU Song-yu; WANG Xiang-wen

    2009-01-01

    Extraction of moving objects is an important and fundamental research topic for many video ap-plications. This paper addresses an unsupervised spatio-temporal segmentation scheme to extract moving objects from video sequences. The temporal segmentation localizes moving objects by comparing the motion vector of each block in each frame with the corresponding global motion vector estimated by an outlier rejection (OR) based method. Furthermore, the temporal compensation utilizing the temporal coherence of moving objects is considered in the temporal segmentation to solve the temporarily stopping problem. The detected moving regions usually have discontinuous boundaries and some holes. These regions are then compensated in the spatial domain. In the spatial segmentation, the watershed algorithm considering the global information improves the accuracy of segmentation in the spatial domain. The modified mean filter is presented to suppress some minima. By using a fusion module, moving objects are extracted. Experiments on various sequences have successfully demonstrated the validity of the proposed scheme.

  10. Spatio-temporal dynamcis of a cell signal cascade with negative feedback

    Science.gov (United States)

    Maya Bernal, Jose Luis; Ramirez-Santiago, Guillermo

    2014-03-01

    We studied the spatio-temporal dynamics of a system of reactio-diffusion equations that models a cell signal transduction pathway with six cycles and negative feedback. The basic cycle consists of the phosphorylation-dephosphorylation of two antagonic proteins. We found two regimes of saturation of the enzimatic reaction in the kinetic parameters space and determined the conditions for the signal propagation in the steady state. The trajectories for which transduction occurs are defined in terms of the ratio of the enzimatic activities. We found that in spite of the negative feedback the cell signal cascade behaves as an amplifier and produces phosphoprotein concentration gradients within the cell. This model behaves also as a noise filter and as a switch. Supported by DGAPA-UNAM Contract IN118410-3.

  11. MODELLING AND SIMULATION OF A NEUROPHYSIOLOGICAL EXPERIMENT BY SPATIO-TEMPORAL POINT PROCESSES

    Directory of Open Access Journals (Sweden)

    Viktor Beneš

    2011-05-01

    Full Text Available We present a stochastic model of an experimentmonitoring the spiking activity of a place cell of hippocampus of an experimental animal moving in an arena. Doubly stochastic spatio-temporal point process is used to model and quantify overdispersion. Stochastic intensity is modelled by a Lévy based random field while the animal path is simplified to a discrete random walk. In a simulation study first a method suggested previously is used. Then it is shown that a solution of the filtering problem yields the desired inference to the random intensity. Two approaches are suggested and the new one based on finite point process density is applied. Using Markov chain Monte Carlo we obtain numerical results from the simulated model. The methodology is discussed.

  12. Spatio-temporal statistical models with applications to atmospheric processes

    International Nuclear Information System (INIS)

    This doctoral dissertation is presented as three self-contained papers. An introductory chapter considers traditional spatio-temporal statistical methods used in the atmospheric sciences from a statistical perspective. Although this section is primarily a review, many of the statistical issues considered have not been considered in the context of these methods and several open questions are posed. The first paper attempts to determine a means of characterizing the semiannual oscillation (SAO) spatial variation in the northern hemisphere extratropical height field. It was discovered that the midlatitude SAO in 500hPa geopotential height could be explained almost entirely as a result of spatial and temporal asymmetries in the annual variation of stationary eddies. It was concluded that the mechanism for the SAO in the northern hemisphere is a result of land-sea contrasts. The second paper examines the seasonal variability of mixed Rossby-gravity waves (MRGW) in lower stratospheric over the equatorial Pacific. Advanced cyclostationary time series techniques were used for analysis. It was found that there are significant twice-yearly peaks in MRGW activity. Analyses also suggested a convergence of horizontal momentum flux associated with these waves. In the third paper, a new spatio-temporal statistical model is proposed that attempts to consider the influence of both temporal and spatial variability. This method is mainly concerned with prediction in space and time, and provides a spatially descriptive and temporally dynamic model

  13. Mining fuzzy association rules in spatio-temporal databases

    Science.gov (United States)

    Shu, Hong; Dong, Lin; Zhu, Xinyan

    2008-12-01

    A huge amount of geospatial and temporal data have been collected through various networks of environment monitoring stations. For instance, daily precipitation and temperature are observed at hundreds of meteorological stations in Northeastern China. However, these massive raw data from the stations are not fully utilized for meeting the requirements of human decision-making. In nature, the discovery of geographical data mining is the computation of multivariate spatio-temporal correlations through the stages of data mining. In this paper, a procedure of mining association rules in regional climate-changing databases is introduced. The methods of Kriging interpolation, fuzzy cmeans clustering, and Apriori-based logical rules extraction are employed subsequently. Formally, we define geographical spatio-temporal transactions and fuzzy association rules. Innovatively, we make fuzzy data conceptualization by means of fuzzy c-means clustering, and transform fuzzy data items with membership grades into Boolean data items with weights by means ofλ-cut sets. When the algorithm Apriori is executed on Boolean transactions with weights, fuzzy association rules are derived. Fuzzy association rules are more nature than crisp association rules for human cognition about the reality.

  14. Research on Process-oriented Spatio-temporal Data Model

    Directory of Open Access Journals (Sweden)

    XUE Cunjin

    2016-02-01

    Full Text Available According to the analysis of the present status and existing problems of spatio-temporal data models developed in last 20 years,this paper proposes a process-oriented spatio-temporal data model (POSTDM,aiming at representing,organizing and storing continuity and gradual geographical entities. The dynamic geographical entities are graded and abstracted into process objects series from their intrinsic characteristics,which are process objects,process stage objects,process sequence objects and process state objects. The logical relationships among process entities are further studied and the structure of UML models and storage are also designed. In addition,through the mechanisms of continuity and gradual changes impliedly recorded by process objects,and the modes of their procedure interfaces offered by the customized ObjcetStorageTable,the POSTDM can carry out process representation,storage and dynamic analysis of continuity and gradual geographic entities. Taking a process organization and storage of marine data as an example,a prototype system (consisting of an object-relational database and a functional analysis platform is developed for validating and evaluating the model's practicability.

  15. Multiscale recurrence analysis of spatio-temporal data

    Science.gov (United States)

    Riedl, M.; Marwan, N.; Kurths, J.

    2015-12-01

    The description and analysis of spatio-temporal dynamics is a crucial task in many scientific disciplines. In this work, we propose a method which uses the mapogram as a similarity measure between spatially distributed data instances at different time points. The resulting similarity values of the pairwise comparison are used to construct a recurrence plot in order to benefit from established tools of recurrence quantification analysis and recurrence network analysis. In contrast to other recurrence tools for this purpose, the mapogram approach allows the specific focus on different spatial scales that can be used in a multi-scale analysis of spatio-temporal dynamics. We illustrate this approach by application on mixed dynamics, such as traveling parallel wave fronts with additive noise, as well as more complicate examples, pseudo-random numbers and coupled map lattices with a semi-logistic mapping rule. Especially the complicate examples show the usefulness of the multi-scale consideration in order to take spatial pattern of different scales and with different rhythms into account. So, this mapogram approach promises new insights in problems of climatology, ecology, or medicine.

  16. The spatio-temporal spectrum of turbulent flows.

    Science.gov (United States)

    Clark di Leoni, P; Cobelli, P J; Mininni, P D

    2015-12-01

    Identification and extraction of vortical structures and of waves in a disorganised flow is a mayor challenge in the study of turbulence. We present a study of the spatio-temporal behavior of turbulent flows in the presence of different restitutive forces. We show how to compute and analyse the spatio-temporal spectrum from data stemming from numerical simulations and from laboratory experiments. Four cases are considered: homogeneous and isotropic turbulence, rotating turbulence, stratified turbulence, and water wave turbulence. For homogeneous and isotropic turbulence, the spectrum allows identification of sweeping by the large-scale flow. For rotating and for stratified turbulence, the spectrum allows identification of the waves, precise quantification of the energy in the waves and in the turbulent eddies, and identification of physical mechanisms such as Doppler shift and wave absorption in critical layers. Finally, in water wave turbulence the spectrum shows a transition from gravity-capillary waves to bound waves as the amplitude of the forcing is increased. PMID:26701711

  17. Spatio-temporal avalanche forecasting with Support Vector Machines

    Directory of Open Access Journals (Sweden)

    A. Pozdnoukhov

    2011-02-01

    Full Text Available This paper explores the use of the Support Vector Machine (SVM as a data exploration tool and a predictive engine for spatio-temporal forecasting of snow avalanches. Based on the historical observations of avalanche activity, meteorological conditions and snowpack observations in the field, an SVM is used to build a data-driven spatio-temporal forecast for the local mountain region. It incorporates the outputs of simple physics-based and statistical approaches used to interpolate meteorological and snowpack-related data over a digital elevation model of the region. The interpretation of the produced forecast is discussed, and the quality of the model is validated using observations and avalanche bulletins of the recent years. The insight into the model behaviour is presented to highlight the interpretability of the model, its abilities to produce reliable forecasts for individual avalanche paths and sensitivity to input data. Estimates of prediction uncertainty are obtained with ensemble forecasting. The case study was carried out using data from the avalanche forecasting service in the Locaber region of Scotland, where avalanches are forecast on a daily basis during the winter months.

  18. Spatio-temporal statistical models with applications to atmospheric processes

    Energy Technology Data Exchange (ETDEWEB)

    Wikle, C.K.

    1996-12-31

    This doctoral dissertation is presented as three self-contained papers. An introductory chapter considers traditional spatio-temporal statistical methods used in the atmospheric sciences from a statistical perspective. Although this section is primarily a review, many of the statistical issues considered have not been considered in the context of these methods and several open questions are posed. The first paper attempts to determine a means of characterizing the semiannual oscillation (SAO) spatial variation in the northern hemisphere extratropical height field. It was discovered that the midlatitude SAO in 500hPa geopotential height could be explained almost entirely as a result of spatial and temporal asymmetries in the annual variation of stationary eddies. It was concluded that the mechanism for the SAO in the northern hemisphere is a result of land-sea contrasts. The second paper examines the seasonal variability of mixed Rossby-gravity waves (MRGW) in lower stratospheric over the equatorial Pacific. Advanced cyclostationary time series techniques were used for analysis. It was found that there are significant twice-yearly peaks in MRGW activity. Analyses also suggested a convergence of horizontal momentum flux associated with these waves. In the third paper, a new spatio-temporal statistical model is proposed that attempts to consider the influence of both temporal and spatial variability. This method is mainly concerned with prediction in space and time, and provides a spatially descriptive and temporally dynamic model.

  19. Standards-Based Services for Big Spatio-Temporal Data

    Science.gov (United States)

    Baumann, P.; Merticariu, V.; Dumitru, A.; Misev, D.

    2016-06-01

    With the unprecedented availability of continuously updated measured and generated data there is an immense potential for getting new and timely insights - yet, the value is not fully leveraged as of today. The quest is up for high-level service interfaces for dissecting datasets and rejoining them with other datasets - ultimately, to allow users to ask "any question, anytime, on any size" enabling them to "build their own product on the go". With OGC Coverages, a concrete, interoperable data model has been established which unifies n-D spatio-temporal regular and irregular grids, point clouds, and meshes. The Web Coverage Service (WCS) suite provides versatile streamlined coverage functionality ranging from simple access to flexible spatio-temporal analytics. Flexibility and scalability of the WCS suite has been demonstrated in practice through massive services run by large-scale data centers. We present the current status in OGC Coverage data and service models, contrast them to related work, and describe a scalable implementation based on the rasdaman array engine.

  20. Spatio-temporal point pattern analysis on Wenchuan strong earthquake

    Institute of Scientific and Technical Information of China (English)

    PeijianShi; Jie Liu; ZhenYang

    2009-01-01

    For exploring the aftershock occurrence process of the 2008 Wenchuan strong earthquake, the spatio-temporal point pattern analysis method is employed to study the sequences of aftershocks with magnitude M≥4.0, M≥4.5, and M≥5.0. It is found that these data exhibit the spatio-temporal clustering on a certain distance scale and on a certain time scale. In particular, the space-time interaction obviously strengthens when the distance is less than 60 km and the time is less than 260 h for the first two aftershock sequences; however, it becomes strong when the distance scale is less than 80 km and the time scale is less than 150 h for the last aftershock sequence. The completely spatial randomness analysis on the data regardless of time component shows that the spatial clustering of the aftershocks gradually strengthens on the condition that the distance is less than 60 km. The results are valuable for exploring the occurrence rules of the Wenchuan strong earthquake and for predicting the aftershocks.

  1. Spatio-temporal response of maize yield to edaphic and meteorological conditions in a saline farmland

    Science.gov (United States)

    Spatio-temporal variability of crop production strongly depends on soil heterogeneity, meteorological conditions, and their interaction. Canopy reflectance can be used to describe crop status and yield spatial variability. The objectives of this work were to understand the spatio-temporal variabilit...

  2. Evaluation of high resolution spatio-temporal precipitation extremes from a stochastic weather generator

    DEFF Research Database (Denmark)

    Sørup, Hjalte Jomo Danielsen; Christensen, O. B.; Arnbjerg-Nielsen, Karsten;

    Spatio-temporal rainfall is modelled for the North-Eastern part of Zealand (Denmark) using the Spatio-Temporal Neyman-Scott Rectangular Pulses model as implemented in the RainSim software. Hourly precipitation series for fitting the model are obtained from a dense network of tipping bucket rain g...

  3. Assessment of spatio-temporal gait parameters from trunk accelerations during human walking

    NARCIS (Netherlands)

    Zijlstra, W; Hof, AL

    2003-01-01

    This paper studies the feasibility of an analysis of spatio-temporal gait parameters based upon accelerometry. To this purpose, acceleration patterns of the trunk and their relationships with spatio-temporal gait parameters were analysed in healthy subjects. Based on model predictions of the body's

  4. Equivalent circuit analysis of terahertz metamaterial filters

    Institute of Scientific and Technical Information of China (English)

    Xueqian Zhang; Quan Li; Wei Cao; Weisheng Yue; Jianqiang Gu; Zhen Tian; Jiaguang Han; Weili Zhang

    2011-01-01

    Metamaterials have been demonstrated over a significant portion of the electromagnetic spectra from radio,microwave,and terahertz (THz) to the optical regimes.The unique properties of metamaterials are not attainable with naturally occurring materials[1].Thus,enormous applications in devices and techniques,such as superlens,cloaking antenna,and sub-wavelength photolithography are enabled[2-5].The capability of metamaterials has been broadly expanded because they allow precise control of the electromagnetic responses.The appreciation of electromagnetic response control through metamaterial structures provides unique benefits in the design of versatile devices,including filters,modulators,and switchable components.%An equivalent circuit model for the analysis and design of terahertz (THz) metamaterial filters is presented. The proposed model, derived based on LMC equivalent circuits, takes into account the detailed geometrical parameters and the presence of a dielectric substrate with the existing analytic expressions for self-inductance, mutual inductance, and capacitance. The model is in good agreement with the experimental measurements and full-wave simulations. Exploiting the circuit model has made it possible to predict accurately the resonance frequency of the proposed structures and thus, quick and accurate process of designing THz device from artificial metamaterials is offered.

  5. Full-Scale Approximations of Spatio-Temporal Covariance Models for Large Datasets

    KAUST Repository

    Zhang, Bohai

    2014-01-01

    Various continuously-indexed spatio-temporal process models have been constructed to characterize spatio-temporal dependence structures, but the computational complexity for model fitting and predictions grows in a cubic order with the size of dataset and application of such models is not feasible for large datasets. This article extends the full-scale approximation (FSA) approach by Sang and Huang (2012) to the spatio-temporal context to reduce computational complexity. A reversible jump Markov chain Monte Carlo (RJMCMC) algorithm is proposed to select knots automatically from a discrete set of spatio-temporal points. Our approach is applicable to nonseparable and nonstationary spatio-temporal covariance models. We illustrate the effectiveness of our method through simulation experiments and application to an ozone measurement dataset.

  6. Clinical gait data analysis based on Spatio-Temporal features

    CERN Document Server

    Katiyar, Rohit

    2010-01-01

    Analysing human gait has found considerable interest in recent computer vision research. So far, however, contributions to this topic exclusively dealt with the tasks of person identification or activity recognition. In this paper, we consider a different application for gait analysis and examine its use as a means of deducing the physical well-being of people. The proposed method is based on transforming the joint motion trajectories using wavelets to extract spatio-temporal features which are then fed as input to a vector quantiser; a self-organising map for classification of walking patterns of individuals with and without pathology. We show that our proposed algorithm is successful in extracting features that successfully discriminate between individuals with and without locomotion impairment.

  7. Sparse cortical source localization using spatio-temporal atoms.

    Science.gov (United States)

    Korats, Gundars; Ranta, Radu; Le Cam, Steven; Louis-Dorr, Valérie

    2015-08-01

    This paper addresses the problem of sparse localization of cortical sources from scalp EEG recordings. Localization algorithms use propagation model under spatial and/or temporal constraints, but their performance highly depends on the data signal-to-noise ratio (SNR). In this work we propose a dictionary based sparse localization method which uses a data driven spatio-temporal dictionary to reconstruct the measurements using Single Best Replacement (SBR) and Continuation Single Best Replacement (CSBR) algorithms. We tested and compared our methods with the well-known MUSIC and RAP-MUSIC algorithms on simulated realistic data. Tests were carried out for different noise levels. The results show that our method has a strong advantage over MUSIC-type methods in case of synchronized sources. PMID:26737185

  8. Spatio-temporal Patterns in Inclined Layer Convection

    CERN Document Server

    Subramanian, Priya; Brausch, Oliver; Daniels, Karen E; Bodenschatz, Eberhard; Schneider, Tobias M

    2015-01-01

    This paper reports on a theoretical analysis of the rich variety of spatio-temporal patterns observed recently in inclined layer convection at medium Prandtl number when varying the inclination angle {\\gamma} and the Rayleigh number R. The patterns are shown to originate from a complicated competition of buoyancy-driven and shear-flow driven pattern forming mechanisms. The former is expressed as longitudinal convection rolls with their axes oriented parallel to the incline, the latter as perpendicular transverse rolls. Our investigation is based on the standard Oberbeck-Boussinesq equations. Besides conventional methods to study roll patterns and their stability, we employ in particular, direct numerical simulations in large spatial domains comparable with experimental ones. As a result we arrive at a phase diagram of the characteristic complex 3D convection patterns in the {\\gamma}-R- plane, which compares very well to the experiments. In particular it is demonstrated that interactions of specific Fourier mo...

  9. Event-based incremental updating of spatio-temporal database

    Institute of Scientific and Technical Information of China (English)

    周晓光; 陈军; 蒋捷; 朱建军; 李志林

    2004-01-01

    Based on the relationship among the geographic events, spatial changes and the database operations, a new automatic (semi-automatic) incremental updating approach of spatio-temporal database (STDB) named as event-based incremental updating (E-BIU) is proposed in this paper. At first, the relationship among the events, spatial changes and the database operations is analyzed, then a total architecture of E-BIU implementation is designed, which includes an event queue, three managers and two sets of rules, each component is presented in detail. The process of the E-BIU of master STDB is described successively. An example of building's incremental updating is given to illustrate this approach at the end. The result shows that E-BIU is an efficient automatic updating approach for master STDB.

  10. Spatio-temporal GIS Data Model Based on Event Semantics

    Institute of Scientific and Technical Information of China (English)

    XU Zhihong; BIAN Fuling

    2003-01-01

    There are mainly four kinds of models to record and deal with historical information. By taking them as reference, the spatio-temporal model based on event semantics is proposed. In this model, according to the way for describing an event, all the information are divided into five domains. This paper describes the model by using the land parcel change in the cadastral information system, and expounds the model by using five tables corresponding to the five domains.With the aid of this model, seven examples are given on historical query,trace back and recurrence. This model can be implemented either in the extended relational database or in the object-oriented database.

  11. Spatio-temporal wavefront shaping in a microwave cavity

    CERN Document Server

    del Hougne, Philipp; Fink, Mathias; Lerosey, Geoffroy

    2016-01-01

    Controlling waves in complex media has become a major topic of interest, notably through the concepts of time reversal and wavefront shaping. Recently, it was shown that spatial light modulators can counter-intuitively focus waves both in space and time through multiple scattering media when illuminated with optical pulses. In this letter we transpose the concept to a microwave cavity using flat arrays of electronically tunable resonators. We prove that maximizing the Green's function between two antennas at a chosen time yields diffraction limited spatio-temporal focusing. Then, changing the photons' dwell time inside the cavity, we modify the relative distribution of the spatial and temporal degrees of freedom (DoF), and we demonstrate that it has no impact on the field enhancement: wavefront shaping makes use of all available DoF, irrespective of their spatial or temporal nature. Our results prove that wavefront shaping using simple electronically reconfigurable arrays of reflectors is a viable approach to...

  12. Spatio-temporal propagation of cascading overload failures

    CERN Document Server

    Zhao, Jichang; Sanhedrai, Hillel; Cohen, Reuven; Havlin, Shlomo

    2015-01-01

    Different from the direct contact in epidemics spread, overload failures propagate through hidden functional dependencies. Many studies focused on the critical conditions and catastrophic consequences of cascading failures. However, to understand the network vulnerability and mitigate the cascading overload failures, the knowledge of how the failures propagate in time and space is essential but still missing. Here we study the spatio-temporal propagation behavior of cascading overload failures analytically and numerically. The cascading overload failures are found to spread radially from the center of the initial failure with an approximately constant velocity. The propagation velocity decreases with increasing tolerance, and can be well predicted by our theoretical framework with one single correction for all the tolerance values. This propagation velocity is found similar in various model networks and real network structures. Our findings may help to predict and mitigate the dynamics of cascading overload f...

  13. Spatio-temporal structure of hooded gull flocks.

    Directory of Open Access Journals (Sweden)

    Makoto Yomosa

    Full Text Available We analyzed the spatio-temporal structure of hooded gull flocks with a portable stereo camera system. The 3-dimensional positions of individuals were reconstructed from pairs of videos. The motions of each individual were analyzed, and both gliding and flapping motions were quantified based on the velocity time series. We analyzed the distributions of the nearest neighbor's position in terms of coordinates based on each individual's motion. The obtained results were consistent with the aerodynamic interaction between individuals. We characterized the leader-follower relationship between individuals by a delay time to mimic the direction of a motion. A relation between the delay time and a relative position was analyzed quantitatively, which suggested the basic properties of the formation flight that maintains order in the flock.

  14. Numerical spatio-temporal characterization of Listeria monocytogenes biofilms.

    Science.gov (United States)

    Mosquera-Fernández, M; Rodríguez-López, P; Cabo, M L; Balsa-Canto, E

    2014-07-16

    As the structure of biofilms plays a key role in their resistance and persistence, this work presents for the first time the numerical characterization of the temporal evolution of biofilm structures formed by three Listeria monocytogenes strains on two types of stainless-steel supports, AISI 304 SS No. 2B and AISI 316 SS No. 2R. Counting methods, motility tests, fluorescence microscopy and image analysis were combined to study the dynamic evolution of biofilm formation and structure. Image analysis was performed with several well-known parameters as well as a newly defined parameter to quantify spatio-temporal distribution. The results confirm the interstrain variability of L. monocytogenes species regarding biofilm structure and structure evolution. Two types of biofilm were observed: homogeneous or flat and heterogeneous or clustered. Differences in clusters and in attachment and detachment processes were due mainly to the topography and composition of the two surfaces although an effect due to motility was also found. PMID:24858448

  15. Spatio-temporal observations of tertiary ozone maximum

    Directory of Open Access Journals (Sweden)

    V. F. Sofieva

    2009-03-01

    Full Text Available We present spatio-temporal distributions of tertiary ozone maximum (TOM, based on GOMOS (Global Ozone Monitoring by Occultation of Stars ozone measurements in 2002–2006. The tertiary ozone maximum is typically observed in the high-latitude winter mesosphere at altitude ~72 km. Although the explanation for this phenomenon has been found recently – low concentrations of odd-hydrogen cause the subsequent decrease in odd-oxygen losses – models have had significant deviations from existing observations until recently. Good coverage of polar night regions by GOMOS data has allowed for the first time obtaining spatial and temporal observational distributions of night-time ozone mixing ratio in the mesosphere.

    The distributions obtained from GOMOS data have specific features, which are variable from year to year. In particular, due to a long lifetime of ozone in polar night conditions, the downward transport of polar air by the meridional circulation is clearly observed in the tertiary ozone maximum time series. Although the maximum tertiary ozone mixing ratio is achieved close to the polar night terminator (as predicted by the theory, TOM can be observed also at very high latitudes, not only in the beginning and at the end, but also in the middle of winter. We have compared the observational spatio-temporal distributions of tertiary ozone maximum with that obtained using WACCM (Whole Atmosphere Community Climate Model and found that the specific features are reproduced satisfactorily by the model.

    Since ozone in the mesosphere is very sensitive to HOx concentrations, energetic particle precipitation can significantly modify the shape of the ozone profiles. In particular, GOMOS observations have shown that the tertiary ozone maximum was temporarily destroyed during the January 2005 and December 2006 solar proton events as a result of the HOx enhancement from the increased ionization.

  16. Spatio-temporal activity of lightnings over Greece

    Science.gov (United States)

    Nastos, P. T.; Matsangouras, I. T.; Chronis, T. G.

    2012-04-01

    Extreme precipitation events are always associated with convective weather conditions driving to intense lightning activity: Cloud to Ground (CG), Ground to Cloud (GC) and Cloud to Cloud (CC). Thus, the study of lightnings, which typically occur during thunderstorms, gives evidence of the spatio-temporal variability of intense precipitation. Lightning is a natural phenomenon in the atmosphere, being a major cause of storm related with deaths and main trigger of forest fires during dry season. Lightning affects the many electrochemical systems of the body causing nerve damage, memory loss, personality change, and emotional problems. Besides, among the various nitrogen oxides sources, the contribution from lightning likely represents the largest uncertainty. An operational lightning detection network (LDN) has been established since 2007 by HNMS, consisting of eight time-of-arrival sensors (TOA), spatially distributed across Greek territory. In this study, the spatial and temporal variability of recorded lightnings (CG, GC and CC) are analyzed over Greece, during the period from January 14, 2008 to December 31, 2009, for the first time. The data for retrieving the location and time-of-occurrence of lightning were acquired from Hellenic National Meteorological Service (HNMS). In addition to the analysis of spatio-temporal activity over Greece, the HNMS-LDN characteristics are also presented. The results of the performed analysis reveal the specific geographical sub-regions associated with lightnings incidence. Lightning activity occurs mainly during the autumn season, followed by summer and spring. Higher frequencies of flashes appear over Ionian and Aegean Sea than over land during winter period against continental mountainous regions during summer period.

  17. Improving spatio-temporal resolution of infrared images to detect thermal activity of defect at the surface of inorganic glass

    Science.gov (United States)

    Corvec, Guillaume; Robin, Eric; Le Cam, Jean-Benoît; Sangleboeuf, Jean-Christophe; Lucas, Pierre

    2016-07-01

    This paper proposes a noise suppression methodology to improve the spatio-temporal resolution of infrared images. The methodology is divided in two steps. The first one consists in removing the noise from the temporal signal at each pixel. Three basic temporal filters are considered for this purpose: average filter, cost function minimization (FIT) and short time Fast Fourier Transform approach (STFFT). But while this step effectively reduces the temporal signal noise at each pixel, the infrared images may still appear noisy. This is due to a random distribution of a residual offset value of pixels signal. Hence in the second step, the residual offset is identified by considering thermal images for which no mechanical loading is applied. In this case, the temperature variation field is homogeneous and the value of temperature variation at each pixel is theoretically equal to zero. The method is first tested on synthetic images built from infrared computer-generated images combined with experimental noise. The results demonstrate that this approach permits to keep the spatial resolution of infrared images equal to 1 pixel. The methodology is then applied to characterize thermal activity of a defect at the surface of inorganic glass submitted to cyclic mechanical loading. The three basic temporal filters are quantitatively compared and contrasted. Results obtained demonstrate that, contrarily to a basic spatio-temporal approach, the denoising method proposed is suitable to characterize low thermal activity combined to strong spatial gradients induced by cyclic heterogeneous deformations.

  18. A Hybrid Spatio-Temporal Data Indexing Method for Trajectory Databases

    Directory of Open Access Journals (Sweden)

    Shengnan Ke

    2014-07-01

    Full Text Available In recent years, there has been tremendous growth in the field of indoor and outdoor positioning sensors continuously producing huge volumes of trajectory data that has been used in many fields such as location-based services or location intelligence. Trajectory data is massively increased and semantically complicated, which poses a great challenge on spatio-temporal data indexing. This paper proposes a spatio-temporal data indexing method, named HBSTR-tree, which is a hybrid index structure comprising spatio-temporal R-tree, B*-tree and Hash table. To improve the index generation efficiency, rather than directly inserting trajectory points, we group consecutive trajectory points as nodes according to their spatio-temporal semantics and then insert them into spatio-temporal R-tree as leaf nodes. Hash table is used to manage the latest leaf nodes to reduce the frequency of insertion. A new spatio-temporal interval criterion and a new node-choosing sub-algorithm are also proposed to optimize spatio-temporal R-tree structures. In addition, a B*-tree sub-index of leaf nodes is built to query the trajectories of targeted objects efficiently. Furthermore, a database storage scheme based on a NoSQL-type DBMS is also proposed for the purpose of cloud storage. Experimental results prove that HBSTR-tree outperforms TB*-tree in some aspects such as generation efficiency, query performance and query type.

  19. A hybrid spatio-temporal data indexing method for trajectory databases.

    Science.gov (United States)

    Ke, Shengnan; Gong, Jun; Li, Songnian; Zhu, Qing; Liu, Xintao; Zhang, Yeting

    2014-01-01

    In recent years, there has been tremendous growth in the field of indoor and outdoor positioning sensors continuously producing huge volumes of trajectory data that has been used in many fields such as location-based services or location intelligence. Trajectory data is massively increased and semantically complicated, which poses a great challenge on spatio-temporal data indexing. This paper proposes a spatio-temporal data indexing method, named HBSTR-tree, which is a hybrid index structure comprising spatio-temporal R-tree, B*-tree and Hash table. To improve the index generation efficiency, rather than directly inserting trajectory points, we group consecutive trajectory points as nodes according to their spatio-temporal semantics and then insert them into spatio-temporal R-tree as leaf nodes. Hash table is used to manage the latest leaf nodes to reduce the frequency of insertion. A new spatio-temporal interval criterion and a new node-choosing sub-algorithm are also proposed to optimize spatio-temporal R-tree structures. In addition, a B*-tree sub-index of leaf nodes is built to query the trajectories of targeted objects efficiently. Furthermore, a database storage scheme based on a NoSQL-type DBMS is also proposed for the purpose of cloud storage. Experimental results prove that HBSTR-tree outperforms TB*-tree in some aspects such as generation efficiency, query performance and query type. PMID:25051028

  20. A FRAMEWORK FOR ONLINE SPATIO-TEMPORAL DATA VISUALIZATION BASED ON HTML5

    OpenAIRE

    B. Mao; Wu, Z; Cao, J

    2012-01-01

    Web is entering a new phase – HTML5. New features of HTML5 should be studied for online spatio-temporal data visualization. In the proposed framework, spatio-temporal data is stored in the data server and is sent to user browsers with WebSocket. Public geo-data such as Internet digital map is integrated into the browsers. Then animation is implemented through the canvas object defined by the HTML5 specification. To simulate the spatio-temporal data source, we collected the daily locatio...

  1. STSE: Spatio-Temporal Simulation Environment Dedicated to Biology

    Directory of Open Access Journals (Sweden)

    Gerber Susanne

    2011-04-01

    Full Text Available Abstract Background Recently, the availability of high-resolution microscopy together with the advancements in the development of biomarkers as reporters of biomolecular interactions increased the importance of imaging methods in molecular cell biology. These techniques enable the investigation of cellular characteristics like volume, size and geometry as well as volume and geometry of intracellular compartments, and the amount of existing proteins in a spatially resolved manner. Such detailed investigations opened up many new areas of research in the study of spatial, complex and dynamic cellular systems. One of the crucial challenges for the study of such systems is the design of a well stuctured and optimized workflow to provide a systematic and efficient hypothesis verification. Computer Science can efficiently address this task by providing software that facilitates handling, analysis, and evaluation of biological data to the benefit of experimenters and modelers. Results The Spatio-Temporal Simulation Environment (STSE is a set of open-source tools provided to conduct spatio-temporal simulations in discrete structures based on microscopy images. The framework contains modules to digitize, represent, analyze, and mathematically model spatial distributions of biochemical species. Graphical user interface (GUI tools provided with the software enable meshing of the simulation space based on the Voronoi concept. In addition, it supports to automatically acquire spatial information to the mesh from the images based on pixel luminosity (e.g. corresponding to molecular levels from microscopy images. STSE is freely available either as a stand-alone version or included in the linux live distribution Systems Biology Operational Software (SB.OS and can be downloaded from http://www.stse-software.org/. The Python source code as well as a comprehensive user manual and video tutorials are also offered to the research community. We discuss main concepts

  2. Electronic circuits and systems: A compilation. [including integrated circuits, logic circuits, varactor diode circuits, low pass filters, and optical equipment circuits

    Science.gov (United States)

    1975-01-01

    Technological information is presented electronic circuits and systems which have potential utility outside the aerospace community. Topics discussed include circuit components such as filters, converters, and integrators, circuits designed for use with specific equipment or systems, and circuits designed primarily for use with optical equipment or displays.

  3. Response-mode decomposition of spatio-temporal haemodynamics.

    Science.gov (United States)

    Pang, J C; Robinson, P A; Aquino, K M

    2016-05-01

    The blood oxygen-level dependent (BOLD) response to a neural stimulus is analysed using the transfer function derived from a physiologically based poroelastic model of cortical tissue. The transfer function is decomposed into components that correspond to distinct poles, each related to a response mode with a natural frequency and dispersion relation; together these yield the total BOLD response. The properties of the decomposed components provide a deeper understanding of the nature of the BOLD response, via the components' frequency dependences, spatial and temporal power spectra, and resonances. The transfer function components are then used to separate the BOLD response to a localized impulse stimulus, termed the Green function or spatio-temporal haemodynamic response function, into component responses that are explicitly related to underlying physiological quantities. The analytical results also provide a quantitative tool to calculate the linear BOLD response to an arbitrary neural drive, which is faster to implement than direct Fourier transform methods. The results of this study can be used to interpret functional magnetic resonance imaging data in new ways based on physiology, to enhance deconvolution methods and to design experimental protocols that can selectively enhance or suppress particular responses, to probe specific physiological phenomena.

  4. Spatio-temporally smoothed coherence factor for ultrasound imaging.

    Science.gov (United States)

    Xu, Mengling; Yang, Xin; Ding, Mingyue; Yuchi, Ming

    2014-01-01

    Coherence-factor-like beamforming methods, such as the coherence factor (CF), the phase coherence factor (PCF), or the sign coherence factor (SCF), have been applied to suppress side and/or grating lobes and clutter in ultrasound imaging. These adaptive weighting factors can be implemented effectively with low computational complexity to improve image contrast properties. However, because of low SNR, the resulting images may suffer from deficiencies, including reduced overall image brightness, increased speckle variance, black-region artifacts surrounding hyperechoic objects, and underestimated magnitudes of point targets. To overcome these artifacts, a new spatio-temporal smoothing procedure is introduced to the CF method. It results in a smoothed coherence factor which measures the signal coherence among the beamsums of the divided subarrays over the duration of a transmit pulse. In addition, the procedure is extended to the SCF using the sign bits of the received signals. Simulated and real experimental data sets demonstrate that the proposed methods can improve the robustness of the CF and SCF with reduced speckle variance and significant removal of black-region artifacts, while preserving the ability to suppress clutter. Consequently, image contrast can be enhanced, especially for anechoic cysts. PMID:24402905

  5. Workload induced spatio-temporal distortions and safety of flight

    Energy Technology Data Exchange (ETDEWEB)

    Barrett, C.L.; Weisgerber, S.A. (Los Alamos National Lab., NM (USA); Naval Weapons Center, China Lake, CA (USA))

    1989-01-01

    A theoretical analysis of the relationship between cognitive complexity and the perception of time and distance is presented and experimentally verified. Complex tasks produce high rates of mental representation which affect the subjective sense of duration and, through the subjective time scale, the percept of distance derived from dynamic visual cues (i.e., visual cues requiring rate integration). The analysis of the interrelationship of subjective time and subjective distance yields the prediction that, as a function of cognitive complexity, distance estimates derived from dynamic visual cues will be longer than the actual distance whereas estimates based on perceived temporal duration will be shorter than the actual distance. This prediction was confirmed in an experiment in which subjects (both pilots and non-pilots) estimated distances using either temporal cues or dynamic visual cues. The distance estimation task was also combined with secondary loading tasks in order to vary the overall task complexity. The results indicated that distance estimates based on temporal cues were underestimated while estimates based on visual cues were overestimated. This spatio-temporal distortion effect increased with increases in overall task complexity. 30 refs., 6 figs., 1 tab.

  6. Spatio-Temporal Matching for Human Pose Estimation in Video.

    Science.gov (United States)

    Zhou, Feng; Torre, Fernando De la

    2016-08-01

    Detection and tracking humans in videos have been long-standing problems in computer vision. Most successful approaches (e.g., deformable parts models) heavily rely on discriminative models to build appearance detectors for body joints and generative models to constrain possible body configurations (e.g., trees). While these 2D models have been successfully applied to images (and with less success to videos), a major challenge is to generalize these models to cope with camera views. In order to achieve view-invariance, these 2D models typically require a large amount of training data across views that is difficult to gather and time-consuming to label. Unlike existing 2D models, this paper formulates the problem of human detection in videos as spatio-temporal matching (STM) between a 3D motion capture model and trajectories in videos. Our algorithm estimates the camera view and selects a subset of tracked trajectories that matches the motion of the 3D model. The STM is efficiently solved with linear programming, and it is robust to tracking mismatches, occlusions and outliers. To the best of our knowledge this is the first paper that solves the correspondence between video and 3D motion capture data for human pose detection. Experiments on the CMU motion capture, Human3.6M, Berkeley MHAD and CMU MAD databases illustrate the benefits of our method over state-of-the-art approaches. PMID:26863647

  7. Supervised learning on graphs of spatio-temporal similarity in satellite image sequences

    CERN Document Server

    Héas, Patrick

    2007-01-01

    High resolution satellite image sequences are multidimensional signals composed of spatio-temporal patterns associated to numerous and various phenomena. Bayesian methods have been previously proposed in (Heas and Datcu, 2005) to code the information contained in satellite image sequences in a graph representation using Bayesian methods. Based on such a representation, this paper further presents a supervised learning methodology of semantics associated to spatio-temporal patterns occurring in satellite image sequences. It enables the recognition and the probabilistic retrieval of similar events. Indeed, graphs are attached to statistical models for spatio-temporal processes, which at their turn describe physical changes in the observed scene. Therefore, we adjust a parametric model evaluating similarity types between graph patterns in order to represent user-specific semantics attached to spatio-temporal phenomena. The learning step is performed by the incremental definition of similarity types via user-prov...

  8. Numerically Reproduction of Spatio-Temporal Evolution of Surface Plasmon Polaritons at Dielectric-Plasma Interface

    Institute of Scientific and Technical Information of China (English)

    CHEN Zhao-Quan; LIU Ming-Hai; ZHOU Qi-Yan; HU Ye-Lin; YANG An; ZHU Long-Ji; HU Xi-Wei

    2011-01-01

    @@ Discharges in planar-type overdense plasmas caused by resonant excitation of surface plasmon polaritons(SPPs)are presented.The spatio-temporal evolution of surface waves of SPPs at the dielectric-plasma interface is reproduced numerically.It is found that different discharge light patterns are excited by different spatio-temporal wave fields.Moreover, the corrugation surface included in the proposed plasma sources plays a significant role in producing large-ares uniform plasmas.%Discharges in planar-type overdense plasmas caused by resonant excitation of surface plasmon polaritons (SPPs) are presented.The spatio-temporal evolution of surface waves of SPPs at the dielectric-plasma interface is reproduced numerically.It is found that different discharge light patterns are excited by different spatio-temporal wave fields.Moreover, the corrugation surface included in the proposed plasma sources plays a significant role in producing large-area uniform plasmas.

  9. Spatio-temporal analysis of female breast cancer incidence in Shenzhen, 2007–2012

    OpenAIRE

    Zhou, Hai-Bin; Liu, Sheng-Yuan; Lei, Lin; Chen, Zhong-Wei; Peng, Ji; Yang, Ying-Zhou; Liu, Xiao-li

    2015-01-01

    Introduction Breast cancer is a leading tumor with a high mortality in women. This study examined the spatio-temporal distribution of the incidence of female breast cancer in Shenzhen between 2007 and 2012. Methods The data on breast cancer incidence were obtained from the Shenzhen Cancer Registry System. To describe the temporal trend, the average annual percentage change (AAPC) was analyzed using a joinpoint regression model. Spatial autocorrelation and a retrospective spatio-temporal scan ...

  10. 时空数据库索引机制研究%Research of Index Mechanisms in Spatio-temporal Databases

    Institute of Scientific and Technical Information of China (English)

    黄曙荣; 秦小麟

    2003-01-01

    Spatio-temporal database manages the large amount of spatial objects that change over time. It is necessary to query the spatio-temporal objects of the past and the current and to anticipate the future of spatio-temporal objects. It Is important to design an efficient index mechanism for accessing the spatio-temporal data efficiently. The paper analyzes the features of the spatio-temporal objects, studies the methods of spatio-temporal index mechanisms, classifies the index mechanisms, and discusses the key technologies of spatio-temporal indexes. And it also presents the index methods of STADBS that we are studying.

  11. The Spatio-temporal Statistical Structure and Ergodic Behaviour of Scalar Turbulence Within a Rod Canopy

    Science.gov (United States)

    Ghannam, Khaled; Poggi, Davide; Porporato, Amilcare; Katul, Gabriel G.

    2015-12-01

    Connections between the spatial and temporal statistics of turbulent flow, and their possible convergence to ensemble statistics as assumed by the ergodic hypothesis, are explored for passive scalars within a rod canopy. While complete ergodicity is not expected to apply over all the spatial domain within such heterogeneous flows, the fact that canopy turbulence exhibits self-similar characteristics at a given depth within the canopy encourages a discussion on necessary conditions for an `operational' ergodicity framework. Flows between roughness elements such as within canopies exhibit features that distinguish them from their well-studied classical boundary-layer counterparts. These differences are commonly attributed to short-circuiting of the energy cascade and the prevalence of intermittent von Kármán vortex streets in the deeper layers of the canopy. Using laser-induced fluorescence measurements at two different depths within a rod canopy situated in a large flume, the spatio-temporal statistical properties and concomitant necessary conditions for ergodicity of passive scalar turbulence statistics are evaluated. First, the integral time and length scales are analyzed and their corresponding maximum values are used to guide the construction of an ensemble of independent realizations from repeated spatio-temporal concentration measurements. As a statistical analysis for an operational ergodicity check, a Kolmogorov-Smirnov test on the distributions of temporal and spatial concentration series against the ensemble was conducted. The outcome of this test reveals that ergodicity is reasonably valid over the entire domain except close to the rod elements where wake-induced inhomogeneities and damped turbulence prevail. The spatial concentration statistics within a grid-cell (square domain formed by four corner rods) appear to be less ergodic than their temporal counterparts, which is not surprising given the periodicity and persistence of von Kármán vortices in

  12. Spatio-Temporal Constrained Human Trajectory Generation from the PIR Motion Detector Sensor Network Data: A Geometric Algebra Approach.

    Science.gov (United States)

    Yu, Zhaoyuan; Yuan, Linwang; Luo, Wen; Feng, Linyao; Lv, Guonian

    2015-12-30

    Passive infrared (PIR) motion detectors, which can support long-term continuous observation, are widely used for human motion analysis. Extracting all possible trajectories from the PIR sensor networks is important. Because the PIR sensor does not log location and individual information, none of the existing methods can generate all possible human motion trajectories that satisfy various spatio-temporal constraints from the sensor activation log data. In this paper, a geometric algebra (GA)-based approach is developed to generate all possible human trajectories from the PIR sensor network data. Firstly, the representation of the geographical network, sensor activation response sequences and the human motion are represented as algebraic elements using GA. The human motion status of each sensor activation are labeled using the GA-based trajectory tracking. Then, a matrix multiplication approach is developed to dynamically generate the human trajectories according to the sensor activation log and the spatio-temporal constraints. The method is tested with the MERL motion database. Experiments show that our method can flexibly extract the major statistical pattern of the human motion. Compared with direct statistical analysis and tracklet graph method, our method can effectively extract all possible trajectories of the human motion, which makes it more accurate. Our method is also likely to provides a new way to filter other passive sensor log data in sensor networks.

  13. Spatio-Temporal Constrained Human Trajectory Generation from the PIR Motion Detector Sensor Network Data: A Geometric Algebra Approach

    Directory of Open Access Journals (Sweden)

    Zhaoyuan Yu

    2015-12-01

    Full Text Available Passive infrared (PIR motion detectors, which can support long-term continuous observation, are widely used for human motion analysis. Extracting all possible trajectories from the PIR sensor networks is important. Because the PIR sensor does not log location and individual information, none of the existing methods can generate all possible human motion trajectories that satisfy various spatio-temporal constraints from the sensor activation log data. In this paper, a geometric algebra (GA-based approach is developed to generate all possible human trajectories from the PIR sensor network data. Firstly, the representation of the geographical network, sensor activation response sequences and the human motion are represented as algebraic elements using GA. The human motion status of each sensor activation are labeled using the GA-based trajectory tracking. Then, a matrix multiplication approach is developed to dynamically generate the human trajectories according to the sensor activation log and the spatio-temporal constraints. The method is tested with the MERL motion database. Experiments show that our method can flexibly extract the major statistical pattern of the human motion. Compared with direct statistical analysis and tracklet graph method, our method can effectively extract all possible trajectories of the human motion, which makes it more accurate. Our method is also likely to provides a new way to filter other passive sensor log data in sensor networks.

  14. Spatio-Temporal Constrained Human Trajectory Generation from the PIR Motion Detector Sensor Network Data: A Geometric Algebra Approach.

    Science.gov (United States)

    Yu, Zhaoyuan; Yuan, Linwang; Luo, Wen; Feng, Linyao; Lv, Guonian

    2015-01-01

    Passive infrared (PIR) motion detectors, which can support long-term continuous observation, are widely used for human motion analysis. Extracting all possible trajectories from the PIR sensor networks is important. Because the PIR sensor does not log location and individual information, none of the existing methods can generate all possible human motion trajectories that satisfy various spatio-temporal constraints from the sensor activation log data. In this paper, a geometric algebra (GA)-based approach is developed to generate all possible human trajectories from the PIR sensor network data. Firstly, the representation of the geographical network, sensor activation response sequences and the human motion are represented as algebraic elements using GA. The human motion status of each sensor activation are labeled using the GA-based trajectory tracking. Then, a matrix multiplication approach is developed to dynamically generate the human trajectories according to the sensor activation log and the spatio-temporal constraints. The method is tested with the MERL motion database. Experiments show that our method can flexibly extract the major statistical pattern of the human motion. Compared with direct statistical analysis and tracklet graph method, our method can effectively extract all possible trajectories of the human motion, which makes it more accurate. Our method is also likely to provides a new way to filter other passive sensor log data in sensor networks. PMID:26729123

  15. Spatio-Temporal Oscillations in Predator-Prey Systems

    Science.gov (United States)

    Tomé, T.; de Carvalho, K. Cristina

    2005-10-01

    In recent years a particularly great effort has been made to understand the role of space given by a spatial structure and local interactions in the characterization of the dynamics of competing biological species. Irreversible stochastic lattice models have been studied to mimic predator-prey systems with Markovian local rules based in the Lotka-Volterra model. One of the problems being studied is the stability of the temporal oscillations of the population of two-species systems-whether they are synchronized. Here we study the temporal oscillations of a two-species system by considering two probabilistic cellular automata defined in regular lattices where each site can be in three states: empty, occupied by a prey, or occupied by a predator. One of them, the isotropic model, has local rules similar to those of the contact process and try to mimic the Lotka-Volterra model mechanisms. The other automaton, the anisotropic model, is based in rules that are similar to the isotropic model, but a anisotropic neighborhood is considered. This model was introduced to explore the effect of spatial anisotropy in temporal oscillations. In fact, it has been pointed out that temporally periodic states can be stable in spatial anisotropic irreversible systems whose anisotropy is exploited conveniently. We show Monte Carlo simulations performed on square lattices for both automata. Our results indicate that, in the thermodynamic limit, oscillations can occur only at a local level, even in the anisotropic model. We observe that for given sets of control parameters a spatio-temporal oscillation occurs in the system. These structures are analyzed.

  16. Spatio-temporal representativeness of aerosol remote sensing observations

    Science.gov (United States)

    Schutgens, Nick; Gryspeerdt, Edward; Tsyro, Svetlana; Goto, Daisuke; Watson-Parris, Duncan; Weigum, Natalie; Schulz, Michael; Stier, Philip

    2016-04-01

    One characteristic of remote sensing observations is the strong intermittency with which they observe the same scene. Due to unfavourable conditions (due to e.g. low visible light, cloudiness or high surface albedo), sampling constraints (due to e.g. polar orbits) or instrument malfunction or maintenance, gaps in the observing record of hours to months exist. At the same time, satellite L3 products often are spatial aggregates over considerable distances (e.g. 1 by 1 degree). We study the impact of spatio-temporal sampling of observations on their representativeness: i.e. how well can satellite products represent the large scale (~ 100 by 100 km) aerosol field over periods of days, months, or years. This study was conducted by using diverse global and regional aerosol models as a truth and sub-sample them according to actual observations. In this way, we have been able to study the representativeness of different observing systems like MODIS, CALIOP and AERONET. Monthly and yearly averages allow serious sampling errors, that may still be present in multi-year climatologies due to recurring observing patterns. Even daily averages are affected as diurnal cycles can often not be observed. We discuss the implications these representativeness errors have for e.g. model evaluation or the construction of climatologies. We also assess similar representativeness issues in ground site in-situ observations from e.g. EMEP or IMPROVE and show that satellite datasets have distinct advantages due to their better spatial coverage provided temporal sampling is dealt with properly (i.e. through collocation of datasets). Finally, we briefly introduce a software tool (the Community Intercomparison Suite or CIS) that is designed to improve representativeness of datasets in intercomparion studies through aggregation and collocation of data.

  17. Visual Analysis of Multi-Run Spatio-Temporal Simulations Using Isocontour Similarity for Projected Views.

    Science.gov (United States)

    Fofonov, Alexey; Molchanov, Vladimir; Linsen, Lars

    2016-08-01

    Multi-run simulations are widely used to investigate how simulated processes evolve depending on varying initial conditions. Frequently, such simulations model the change of spatial phenomena over time. Isocontours have proven to be effective for the visual representation and analysis of 2D and 3D spatial scalar fields. We propose a novel visualization approach for multi-run simulation data based on isocontours. By introducing a distance function for isocontours, we generate a distance matrix used for a multidimensional scaling projection. Multiple simulation runs are represented by polylines in the projected view displaying change over time. We propose a fast calculation of isocontour differences based on a quasi-Monte Carlo approach. For interactive visual analysis, we support filtering and selection mechanisms on the multi-run plot and on linked views to physical space visualizations. Our approach can be effectively used for the visual representation of ensembles, for pattern and outlier detection, for the investigation of the influence of simulation parameters, and for a detailed analysis of the features detected. The proposed method is applicable to data of any spatial dimensionality and any spatial representation (gridded or unstructured). We validate our approach by performing a user study on synthetic data and applying it to different types of multi-run spatio-temporal simulation data. PMID:26561458

  18. Spatio-temporal modelling of atmospheric pollution based on observations provided by an air quality monitoring network at a regional scale

    International Nuclear Information System (INIS)

    This study is devoted to the spatio-temporal modelling of air pollution at a regional scale using a set of statistical methods in order to treat the measurements of pollutant concentrations (NO2, O3) provided by an air quality monitoring network (AIRPARIF). The main objective is the improvement of the pollutant fields mapping using either interpolation methods based on the spatial or spatio-temporal structure of the data (spatial or spatio-temporal kriging) or some algorithms taking into account the observations, in order to correct the concentrations simulated by a deterministic model (Ensemble Kalman Filter). The results show that nitrogen dioxide mapping based only on spatial interpolation (kriging) gives the best results, while the spatial repartition of the monitoring sites is good. For the ozone mapping it is the sequential data assimilation that leads us to a better reconstruction of the plume's form and position for the analyzed cases. Complementary to the pollutant mapping, another objective was to perform a local prediction of ozone concentrations on a 24-hour horizon; this task was performed using Artificial Neural Networks. The performance indices obtained using two types of neural architectures indicate a fair accuracy especially for the first 8 hours of prediction horizon. (author)

  19. Brazilian Amazonia Deforestation Detection Using Spatio-Temporal Scan Statistics

    Science.gov (United States)

    Vieira, C. A. O.; Santos, N. T.; Carneiro, A. P. S.; Balieiro, A. A. S.

    2012-07-01

    The spatio-temporal models, developed for analyses of diseases, can also be used for others fields of study, including concerns about forest and deforestation. The aim of this paper is to quantitatively check priority areas in order to combat deforestation on the Amazon forest, using the space-time scan statistic. The study area location is at the south of the Amazonas State and cover around 297.183 kilometre squares, including the municipality of Boca do Acre, Labrea, Canutama, Humaita, Manicore, Novo Aripuana e Apui County on the north region of Brazil. This area has showed a significant change for land cover, which has increased the number of deforestation's alerts. Therefore this situation becomes a concern and gets more investigation, trying to stop factors that increase the number of cases in the area. The methodology includes the location and year that deforestation's alert occurred. These deforestation's alerts are mapped by the DETER (Detection System of Deforestation in Real Time in Amazonia), which is carry out by the Brazilian Space Agency (INPE). The software SatScanTM v7.0 was used in order to define space-time permutation scan statistic for detection of deforestation cases. The outcome of this experiment shows an efficient model to detect space-time clusters of deforestation's alerts. The model was efficient to detect the location, the size, the order and characteristics about activities at the end of the experiments. Two clusters were considered actives and kept actives up to the end of the study. These clusters are located in Canutama and Lábrea County. This quantitative spatial modelling of deforestation warnings allowed: firstly, identifying actives clustering of deforestation, in which the environment government official are able to concentrate their actions; secondly, identifying historic clustering of deforestation, in which the environment government official are able to monitoring in order to avoid them to became actives again; and finally

  20. Research of Cadastral Data Modelling and Database Updating Based on Spatio-temporal Process

    Directory of Open Access Journals (Sweden)

    ZHANG Feng

    2016-02-01

    Full Text Available The core of modern cadastre management is to renew the cadastre database and keep its currentness,topology consistency and integrity.This paper analyzed the changes and their linkage of various cadastral objects in the update process.Combined object-oriented modeling technique with spatio-temporal objects' evolution express,the paper proposed a cadastral data updating model based on the spatio-temporal process according to people's thought.Change rules based on the spatio-temporal topological relations of evolution cadastral spatio-temporal objects are drafted and further more cascade updating and history back trace of cadastral features,land use and buildings are realized.This model implemented in cadastral management system-ReGIS.Achieved cascade changes are triggered by the direct driving force or perceived external events.The system records spatio-temporal objects' evolution process to facilitate the reconstruction of history,change tracking,analysis and forecasting future changes.

  1. Plant diversity increases spatio-temporal niche complementarity in plant-pollinator interactions.

    Science.gov (United States)

    Venjakob, Christine; Klein, Alexandra-Maria; Ebeling, Anne; Tscharntke, Teja; Scherber, Christoph

    2016-04-01

    Ongoing biodiversity decline impairs ecosystem processes, including pollination. Flower visitation, an important indicator of pollination services, is influenced by plant species richness. However, the spatio-temporal responses of different pollinator groups to plant species richness have not yet been analyzed experimentally. Here, we used an experimental plant species richness gradient to analyze plant-pollinator interactions with an unprecedented spatio-temporal resolution. We observed four pollinator functional groups (honeybees, bumblebees, solitary bees, and hoverflies) in experimental plots at three different vegetation strata between sunrise and sunset. Visits were modified by plant species richness interacting with time and space. Furthermore, the complementarity of pollinator functional groups in space and time was stronger in species-rich mixtures. We conclude that high plant diversity should ensure stable pollination services, mediated via spatio-temporal niche complementarity in flower visitation. PMID:27069585

  2. Adjusted functional boxplots for spatio-temporal data visualization and outlier detection

    KAUST Repository

    Sun, Ying

    2011-10-24

    This article proposes a simulation-based method to adjust functional boxplots for correlations when visualizing functional and spatio-temporal data, as well as detecting outliers. We start by investigating the relationship between the spatio-temporal dependence and the 1.5 times the 50% central region empirical outlier detection rule. Then, we propose to simulate observations without outliers on the basis of a robust estimator of the covariance function of the data. We select the constant factor in the functional boxplot to control the probability of correctly detecting no outliers. Finally, we apply the selected factor to the functional boxplot of the original data. As applications, the factor selection procedure and the adjusted functional boxplots are demonstrated on sea surface temperatures, spatio-temporal precipitation and general circulation model (GCM) data. The outlier detection performance is also compared before and after the factor adjustment. © 2011 John Wiley & Sons, Ltd.

  3. Spatio-Temporal Stochastic Pattern Generator for ensemble prediction and ensemble data assimilation in geophysical applications

    CERN Document Server

    Tsyrulnikov, Michael

    2016-01-01

    A generator of spatio-temporal pseudo-random Gaussian fields that satisfy the "proportionality of scales" property (Tsyroulnikov 2001) is presented. The generator is a third-order in time stochastic differential equation with a pseudo-differential spatial operator defined on a limited area domain in Cartesian coordinate system. The spatial covariance functions of the generated fields belong to the Mat\\'ern class. The spatio-temporal covariances are non-separable. A spectral-space numerical solver is implemented and accelerated exploiting properties of real-world geophysical fields, in particular, smoothness of their spatial spectra. The generator is designed to simulate additive or multiplicative, or other spatio-temporal perturbations that represent uncertainties in numerical prediction models in geophysics. The program code of the generator is publicly available.

  4. Geovisualization Approaches for Spatio-temporal Crime Scene Analysis - Towards 4D Crime Mapping

    Science.gov (United States)

    Wolff, Markus; Asche, Hartmut

    This paper presents a set of methods and techniques for analysis and multidimensional visualisation of crime scenes in a German city. As a first step the approach implies spatio-temporal analysis of crime scenes. Against this background a GIS-based application is developed that facilitates discovering initial trends in spatio-temporal crime scene distributions even for a GIS untrained user. Based on these results further spatio-temporal analysis is conducted to detect variations of certain hotspots in space and time. In a next step these findings of crime scene analysis are integrated into a geovirtual environment. Behind this background the concept of the space-time cube is adopted to allow for visual analysis of repeat burglary victimisation. Since these procedures require incorporating temporal elements into virtual 3D environments, basic methods for 4D crime scene visualisation are outlined in this paper.

  5. Unravelling spatio-temporal evapotranspiration patterns in topographically complex landscapes

    Science.gov (United States)

    Metzen, Daniel; Sheridan, Gary; Nyman, Petter; Lane, Patrick

    2016-04-01

    Vegetation co-evolves with soils and topography under a given long-term climatic forcing. Previous studies demonstrated a strong eco-hydrologic feedback between topography, vegetation and energy and water fluxes. Slope orientation (aspect and gradient) alter the magnitude of incoming solar radiation resulting in larger evaporative losses and less water availability on equator-facing slopes. Furthermore, non-local water inputs from upslope areas potentially contribute to available water at downslope positions. The combined effect of slope orientation and drainage position creates complex spatial patterns in biological productivity and pedogenesis, which in turn alter the local hydrology. In complex upland landscapes, topographic alteration of incoming radiation can cause substantial aridity index (ratio of potential evapotranspiration to precipitation) variations over small spatial extents. Most of the upland forests in south-east Australia are located in an aridity index (AI) range of 1-2, around the energy limited to water limited boundary, where forested systems are expected to be most sensitive to AI changes. In this research we aim to improve the fundamental understanding of spatio-temporal evolution of evapotranspiration (ET) patterns in complex terrain, accounting for local topographic effects on system properties (e.g. soil depth, sapwood area, leaf area) and variation in energy and water exchange processes due to slope orientation and drainage position. Six measurement plots were set-up in a mixed species eucalypt forest on a polar and equatorial-facing hillslope (AI ˜1.3 vs. 1.8) at varying drainage position (ridge, mid-slope, gully), while minimizing variations in other factors, e.g. geology and weather patterns. Sap flow, soil water content, incoming solar radiation and throughfall were continuously monitored at field sites spanning a wide range of soil depth (0.5 - >3m), maximum tree heights (17 - 51m) and LAI (1.2 - 4.6). Site-specific response curves

  6. Evolution of spatio-temporal drought characteristics: validation, projections and effect of adaptation scenarios

    Directory of Open Access Journals (Sweden)

    J.-P. Vidal

    2012-02-01

    Full Text Available Drought events develop in both space and time and they are therefore best described through summary joint spatio-temporal characteristics, like mean duration, mean affected area and total magnitude. This paper addresses the issue of future projections of such characteristics of drought events over France through three main research questions: (1 are downscaled climate projections able to reproduce spatio-temporal characteristics of meteorological and agricultural droughts in France over a present-day period? (2 How such characteristics will evolve over the 21st century? (3 How to use standardized drought indices to represent theoretical adaptation scenarios? These questions are addressed using the Isba land surface model, downscaled climate projections from the ARPEGE General Circulation Model under three emissions scenarios, as well as results from a previously performed 50-yr multilevel and multiscale drought reanalysis over France. Spatio-temporal characteristics of meteorological and agricultural drought events are computed using the Standardized Precipitation Index and the Standardized Soil Wetness Index, respectively, and for time scales of 3 and 12 months. Results first show that the distributions of joint spatio-temporal characteristics of observed events are well reproduced by the downscaled hydroclimate projections over a present-day period. All spatio-temporal characteristics of drought events are then found to dramatically increase over the 21st century, with stronger changes for agricultural droughts. Two theoretical adaptation scenarios are eventually built based on hypotheses of adaptation to evolving climate and hydrological normals, either retrospective or prospective, and by taking advantage of the statistical properties of the standardized drought indices. The perceived spatio-temporal characteristics of drought events derived from these theoretical adaptation scenarios show much reduced changes, but they call for more

  7. Evolution of spatio-temporal drought characteristics: validation, projections and effect of adaptation scenarios

    Directory of Open Access Journals (Sweden)

    J.-P. Vidal

    2012-08-01

    Full Text Available Drought events develop in both space and time and they are therefore best described through summary joint spatio-temporal characteristics, such as mean duration, mean affected area and total magnitude. This paper addresses the issue of future projections of such characteristics of drought events over France through three main research questions: (1 Are downscaled climate projections able to simulate spatio-temporal characteristics of meteorological and agricultural droughts in France over a present-day period? (2 How such characteristics will evolve over the 21st century? (3 How to use standardized drought indices to represent theoretical adaptation scenarios? These questions are addressed using the Isba land surface model, downscaled climate projections from the ARPEGE General Circulation Model under three emissions scenarios, as well as results from a previously performed 50-yr multilevel and multiscale drought reanalysis over France. Spatio-temporal characteristics of meteorological and agricultural drought events are computed using the Standardized Precipitation Index and the Standardized Soil Wetness Index, respectively, and for time scales of 3 and 12 months. Results first show that the distributions of joint spatio-temporal characteristics of observed events are well simulated by the downscaled hydroclimate projections over a present-day period. All spatio-temporal characteristics of drought events are then found to dramatically increase over the 21st century, with stronger changes for agricultural droughts. Two theoretical adaptation scenarios are eventually built based on hypotheses of adaptation to evolving climate and hydrological normals, either retrospective or prospective. The perceived spatio-temporal characteristics of drought events derived from these theoretical adaptation scenarios show much reduced changes, but they call for more realistic scenarios at both the catchment and national scale in order to accurately assess the

  8. Nonlinear system identification NARMAX methods in the time, frequency, and spatio-temporal domains

    CERN Document Server

    Billings, Stephen A

    2013-01-01

    Nonlinear System Identification: NARMAX Methods in the Time, Frequency, and Spatio-Temporal Domains describes a comprehensive framework for the identification and analysis of nonlinear dynamic systems in the time, frequency, and spatio-temporal domains. This book is written with an emphasis on making the algorithms accessible so that they can be applied and used in practice. Includes coverage of: The NARMAX (nonlinear autoregressive moving average with exogenous inputs) modelThe orthogonal least squares algorithm that allows models to be built term by

  9. Spatio-temporal light springs: extended encoding of orbital angular momentum in ultrashort pulses.

    Science.gov (United States)

    Pariente, G; Quéré, F

    2015-05-01

    We introduce a new class of spatio-temporally coupled ultrashort laser beams, which are obtained by superimposing Laguerre-Gauss beams whose azimuthal mode index is correlated to their frequency. These beams are characterized by helical structures for their phase and intensity profiles, which both encode the orbital angular momentum carried by the light. They can easily be engineered in the optical range, and are naturally produced at shorter wavelengths when attosecond pulses are generated by intense femtosecond Laguerre-Gauss laser beams. These spatio-temporal "light springs" will allow for the transfer of the orbital angular momentum to matter by stimulated Raman scattering.

  10. Testing the weak stationarity of a spatio-temporal point process

    DEFF Research Database (Denmark)

    Ghorbani, Mohammad

    2013-01-01

    A common assumption in analyzing spatial and spatio-temporal point processes is stationarity, while in many real applications because of the environmental effects the stationarity condition is not often met. We propose two types of test statistics to test stationarity for spatio-temporal point...... processes, by adapting, Palahi, Pukkala & Mateu (2009) and by considering the square difference between observed and expected (under stationarity) intensities. We study the efficiency of the new statistics by simulated data, and we apply them to test the stationarity of real data....

  11. Analysis of Spatio-Temporal Traffic Patterns Based on Pedestrian Trajectories

    Science.gov (United States)

    Busch, S.; Schindler, T.; Klinger, T.; Brenner, C.

    2016-06-01

    For driver assistance and autonomous driving systems, it is essential to predict the behaviour of other traffic participants. Usually, standard filter approaches are used to this end, however, in many cases, these are not sufficient. For example, pedestrians are able to change their speed or direction instantly. Also, there may be not enough observation data to determine the state of an object reliably, e.g. in case of occlusions. In those cases, it is very useful if a prior model exists, which suggests certain outcomes. For example, it is useful to know that pedestrians are usually crossing the road at a certain location and at certain times. This information can then be stored in a map which then can be used as a prior in scene analysis, or in practical terms to reduce the speed of a vehicle in advance in order to minimize critical situations. In this paper, we present an approach to derive such a spatio-temporal map automatically from the observed behaviour of traffic participants in everyday traffic situations. In our experiments, we use one stationary camera to observe a complex junction, where cars, public transportation and pedestrians interact. We concentrate on the pedestrians trajectories to map traffic patterns. In the first step, we extract trajectory segments from the video data. These segments are then clustered in order to derive a spatial model of the scene, in terms of a spatially embedded graph. In the second step, we analyse the temporal patterns of pedestrian movement on this graph. We are able to derive traffic light sequences as well as the timetables of nearby public transportation. To evaluate our approach, we used a 4 hour video sequence. We show that we are able to derive traffic light sequences as well as time tables of nearby public transportation.

  12. Probabilistic Algorithm for Electromagnetic Brain Imaging with Spatio-Temporal and Forward Model Priors

    DEFF Research Database (Denmark)

    Stahlhut, Carsten; Wipf, David; Attias, Hagai T.;

    2010-01-01

    In this paper we present a novel spatio-temporal inverse method for solving the inverse M/EEG problem. The contribution is two-folded; firstly, the proposed model allows for a sparse spatial and temporal source representation of the M/EEG by applying an automatic relevance determination type prio...

  13. Spatio-temporal interpolation of daily temperatures for global land areas at 1 km resolution

    NARCIS (Netherlands)

    Kilibarda, M.; Hengl, T.; Heuvelink, G.B.M.; Graler, B.; Pebesma, E.; Tadic, M.P.; Bajat, B.

    2014-01-01

    Combined Global Surface Summary of Day and European Climate Assessment and Dataset daily meteorological data sets (around 9000 stations) were used to build spatio-temporal geostatistical models and predict daily air temperature at ground resolution of 1km for the global land mass. Predictions in spa

  14. Spatio-Temporal Detection of Fine-Grained Dyadic Human Interactions

    NARCIS (Netherlands)

    van Gemeren, C.J.; Poppe, R.W.; Veltkamp, R.C.

    2016-01-01

    We introduce a novel spatio-temporal deformable part model for offline detection of fine-grained interactions in video. One novelty of the model is that part detectors model the interacting individuals in a single graph that can contain different combinations of feature descriptors. This allows us t

  15. Application of 3D Spatio-Temporal Data Modeling, Management, and Analysis in DB4GEO

    Science.gov (United States)

    Kuper, P. V.; Breunig, M.; Al-Doori, M.; Thomsen, A.

    2016-10-01

    Many of todaýs world wide challenges such as climate change, water supply and transport systems in cities or movements of crowds need spatio-temporal data to be examined in detail. Thus the number of examinations in 3D space dealing with geospatial objects moving in space and time or even changing their shapes in time will rapidly increase in the future. Prominent spatio-temporal applications are subsurface reservoir modeling, water supply after seawater desalination and the development of transport systems in mega cities. All of these applications generate large spatio-temporal data sets. However, the modeling, management and analysis of 3D geo-objects with changing shape and attributes in time still is a challenge for geospatial database architectures. In this article we describe the application of concepts for the modeling, management and analysis of 2.5D and 3D spatial plus 1D temporal objects implemented in DB4GeO, our service-oriented geospatial database architecture. An example application with spatio-temporal data of a landfill, near the city of Osnabrück in Germany demonstrates the usage of the concepts. Finally, an outlook on our future research focusing on new applications with big data analysis in three spatial plus one temporal dimension in the United Arab Emirates, especially the Dubai area, is given.

  16. Second-order analysis of inhomogeneous spatio-temporal point process data

    NARCIS (Netherlands)

    Gabriel, Edith; Diggle, Peter J.

    2009-01-01

    Second-order methods provide a natural starting point for the analysis of spatial point process data. In this note we extend to the spatio-temporal setting a method proposed by Baddeley et al. [Statistica Neerlandica (2000) Vol. 54, pp. 329-350] for inhomogeneous spatial point process data, and appl

  17. A Bayesian spatio-temporal geostatistical model with an auxiliary lattice for large datasets

    KAUST Repository

    Xu, Ganggang

    2015-01-01

    When spatio-temporal datasets are large, the computational burden can lead to failures in the implementation of traditional geostatistical tools. In this paper, we propose a computationally efficient Bayesian hierarchical spatio-temporal model in which the spatial dependence is approximated by a Gaussian Markov random field (GMRF) while the temporal correlation is described using a vector autoregressive model. By introducing an auxiliary lattice on the spatial region of interest, the proposed method is not only able to handle irregularly spaced observations in the spatial domain, but it is also able to bypass the missing data problem in a spatio-temporal process. Because the computational complexity of the proposed Markov chain Monte Carlo algorithm is of the order O(n) with n the total number of observations in space and time, our method can be used to handle very large spatio-temporal datasets with reasonable CPU times. The performance of the proposed model is illustrated using simulation studies and a dataset of precipitation data from the coterminous United States.

  18. Design and implementation of spatio-temporal database of water and soil loss

    Science.gov (United States)

    Lu, XinHai; Bian, Fulin; Tan, Xiaojun

    2008-12-01

    This paper analyzed the features and limitations of several typical spatio-temporal data models. "spatio-temporal cube": the main disadvantage is that the target change will produce great data redundancy when under non-consecutive circumstances. "Snapshots": it repeatedly saves graphics and attribute of no changes which resulted in waste of storage spaces, and it is impossible to reflect space objects under the same domain and the relationship between the attributes. "Base State with Amendments": merely modify changing object, but it's not suitable for continuous variation space object. "space-frame composite": currently, the model is lacking of sound framework structure and application model. "Object-oriented spatio-temporal model": The modeling concept, theoretical foundation and technical realization has not yet reached a consensus, it's not mature enough. In allusion to the features of the spatial database of water and soil loss, this essay expounded the characteristics of spatiotemporal databases. Spatial features in many practical circumstances ( such as thematic maps in soil and water conservation projects and space elements of soil erosion distribution map) have spatial data features, and also change with time, consequently, required us to establish spatio-temporal database, STDB, which can capture time data and space data at the same time. This analysis based on "ArcSDE versioning mechanisms" temporal and spatial database implement technologies, discussed the construction methods, process and data features of the database, and introduced the implementation of historical data rebuilding and version merging.

  19. Spatio-temporal flow pattern observations using bio-inspired hair flow sensors

    NARCIS (Netherlands)

    Dagamseh, Ahmad; Hmeidi, Sarah; Krijnen, Gijs

    2015-01-01

    In nature, sensing is a fundamental property of virtually all living creatures. For many insects airflow patterns, as observed by means of their hair-sensors, carry highly valuable information exposing the sources of these flows. Flow-sensor arrays can be used to extract spatio-temporal flow fields

  20. a Framework for Online Spatio-Temporal Data Visualization Based on HTML5

    Science.gov (United States)

    Mao, B.; Wu, Z.; Cao, J.

    2012-07-01

    Web is entering a new phase - HTML5. New features of HTML5 should be studied for online spatio-temporal data visualization. In the proposed framework, spatio-temporal data is stored in the data server and is sent to user browsers with WebSocket. Public geo-data such as Internet digital map is integrated into the browsers. Then animation is implemented through the canvas object defined by the HTML5 specification. To simulate the spatio-temporal data source, we collected the daily location of 15 users with GPS tracker. The current positions of the users are collected every minute and are recorded in a file. Based on this file, we generate a real time spatio-temporal data source which sends out current user location every second.By enlarging the real time scales by 60 times, we can observe the movement clearly. The data transmitted with WebSocket is the coordinates of users' current positions, which will can be demonstrated in client browsers.

  1. A FRAMEWORK FOR ONLINE SPATIO-TEMPORAL DATA VISUALIZATION BASED ON HTML5

    Directory of Open Access Journals (Sweden)

    B. Mao

    2012-07-01

    Full Text Available Web is entering a new phase – HTML5. New features of HTML5 should be studied for online spatio-temporal data visualization. In the proposed framework, spatio-temporal data is stored in the data server and is sent to user browsers with WebSocket. Public geo-data such as Internet digital map is integrated into the browsers. Then animation is implemented through the canvas object defined by the HTML5 specification. To simulate the spatio-temporal data source, we collected the daily location of 15 users with GPS tracker. The current positions of the users are collected every minute and are recorded in a file. Based on this file, we generate a real time spatio-temporal data source which sends out current user location every second.By enlarging the real time scales by 60 times, we can observe the movement clearly. The data transmitted with WebSocket is the coordinates of users' current positions, which will can be demonstrated in client browsers.

  2. Spatio-Temporal Analysis of Forest Fire Risk and Danger Using LANDSAT Imagery

    Directory of Open Access Journals (Sweden)

    Ömer Kücük

    2008-06-01

    Full Text Available Computing fire danger and fire risk on a spatio-temporal scale is of crucial importance in fire management planning, and in the simulation of fire growth and development across a landscape. However, due to the complex nature of forests, fire risk and danger potential maps are considered one of the most difficult thematic layers to build up. Remote sensing and digital terrain data have been introduced for efficient discrete classification of fire risk and fire danger potential. In this study, two time-series data of Landsat imagery were used for determining spatio-temporal change of fire risk and danger potential in Korudag forest planning unit in northwestern Turkey. The method comprised the following two steps: (1 creation of indices of the factors influencing fire risk and danger; (2 evaluation of spatio-temporal changes in fire risk and danger of given areas using remote sensing as a quick and inexpensive means and determining the pace of forest cover change. Fire risk and danger potential indices were based on species composition, stand crown closure, stand development stage, insolation, slope and, proximity of agricultural lands to forest and distance from settlement areas. Using the indices generated, fire risk and danger maps were produced for the years 1987 and 2000. Spatio-temporal analyses were then realized based on the maps produced. Results obtained from the study showed that the use of Landsat imagery provided a valuable characterization and mapping of vegetation structure and type with overall classification accuracy higher than 83%.

  3. Spatio-temporal change detection from multidimensional arrays: Detecting deforestation from MODIS time series

    Science.gov (United States)

    Lu, Meng; Pebesma, Edzer; Sanchez, Alber; Verbesselt, Jan

    2016-07-01

    Growing availability of long-term satellite imagery enables change modeling with advanced spatio-temporal statistical methods. Multidimensional arrays naturally match the structure of spatio-temporal satellite data and can provide a clean modeling process for complex spatio-temporal analysis over large datasets. Our study case illustrates the detection of breakpoints in MODIS imagery time series for land cover change in the Brazilian Amazon using the BFAST (Breaks For Additive Season and Trend) change detection framework. BFAST includes an Empirical Fluctuation Process (EFP) to alarm the change and a change point time locating process. We extend the EFP to account for the spatial autocorrelation between spatial neighbors and assess the effects of spatial correlation when applying BFAST on satellite image time series. In addition, we evaluate how sensitive EFP is to the assumption that its time series residuals are temporally uncorrelated, by modeling it as an autoregressive process. We use arrays as a unified data structure for the modeling process, R to execute the analysis, and an array database management system to scale computation. Our results point to BFAST as a robust approach against mild temporal and spatial correlation, to the use of arrays to ease the modeling process of spatio-temporal change, and towards communicable and scalable analysis.

  4. The Impact of Spatio-Temporal Constraints on Cursive Letter Handwriting in Children

    Science.gov (United States)

    Chartrel, Estelle; Vinter, Annie

    2008-01-01

    The study assessed the impact of spatial and temporal constraints on handwriting movements in young children. One hundred children of 5-7 years of age of both genders were given the task of copying isolated cursive letters under four conditions: normal, with temporal, spatial, or spatio-temporal constraints. The results showed that imposing…

  5. Annotating spatio-temporal datasets for meaningful analysis in the Web

    Science.gov (United States)

    Stasch, Christoph; Pebesma, Edzer; Scheider, Simon

    2014-05-01

    More and more environmental datasets that vary in space and time are available in the Web. This comes along with an advantage of using the data for other purposes than originally foreseen, but also with the danger that users may apply inappropriate analysis procedures due to lack of important assumptions made during the data collection process. In order to guide towards a meaningful (statistical) analysis of spatio-temporal datasets available in the Web, we have developed a Higher-Order-Logic formalism that captures some relevant assumptions in our previous work [1]. It allows to proof on meaningful spatial prediction and aggregation in a semi-automated fashion. In this poster presentation, we will present a concept for annotating spatio-temporal datasets available in the Web with concepts defined in our formalism. Therefore, we have defined a subset of the formalism as a Web Ontology Language (OWL) pattern. It allows capturing the distinction between the different spatio-temporal variable types, i.e. point patterns, fields, lattices and trajectories, that in turn determine whether a particular dataset can be interpolated or aggregated in a meaningful way using a certain procedure. The actual annotations that link spatio-temporal datasets with the concepts in the ontology pattern are provided as Linked Data. In order to allow data producers to add the annotations to their datasets, we have implemented a Web portal that uses a triple store at the backend to store the annotations and to make them available in the Linked Data cloud. Furthermore, we have implemented functions in the statistical environment R to retrieve the RDF annotations and, based on these annotations, to support a stronger typing of spatio-temporal datatypes guiding towards a meaningful analysis in R. [1] Stasch, C., Scheider, S., Pebesma, E., Kuhn, W. (2014): "Meaningful spatial prediction and aggregation", Environmental Modelling & Software, 51, 149-165.

  6. Spatio-temporal analysis of female breast cancer incidence in Shenzhen, 2007-2012

    Institute of Scientific and Technical Information of China (English)

    Hai-Bin Zhou; Sheng-Yuan Liu; Lin Lei; Zhong-Wei Chen; Ji Peng; Ying-Zhou Yang; Xiao-Li Liu

    2015-01-01

    Introduction:Breast cancer is a leading tumor with a high mortality in women. This study examined the spatio-temporal distribution of the incidence of female breast cancer in Shenzhen between 2007 and 2012. Methods:The data on breast cancer incidence were obtained from the Shenzhen Cancer Registry System. To describe the temporal trend, the average annual percentage change (AAPC) was analyzed using a joinpoint regression model. Spatial autocorrelation and a retrospective spatio-temporal scan approach were used to detect the spatio-temporal cluster distribution of breast cancer cases. Results:Breast cancer ranked first among different types of cancer in women in Shenzhen between 2007 and 2012 with a crude incidence of 20.0/100,000 population. The age-standardized rate according to the world standard population was 21.1/100,000 in 2012, with an AAPC of 11.3%. The spatial autocorrelation analysis showed a spatial correlation characterized by the presence of a hotspot in south-central Shenzhen, which included the eastern part of Luohu District (Donghu and Liantang Streets) and Yantian District (Shatoujiao, Haishan, and Yantian Streets). Five spatio-temporal cluster areas were detected between 2010 and 2012, one of which was a Class 1 cluster located in southwestern Shenzhen in 2010, which included Yuehai, Nantou, Shahe, Shekou, and Nanshan Streets in Nanshan District with an incidence of 54.1/100,000 and a relative risk of 2.41;the other four were Class 2 clusters located in Yantian, Luohu, Futian, and Longhua Districts with a relative risk ranging from 1.70 to 3.25. Conclusions:This study revealed the spatio-temporal cluster pattern for the incidence of female breast cancer in Shenzhen, which will be useful for a better allocation of health resources in Shenzhen.

  7. Designing Asynchronous Circuits for Low Power: An IFIR Filter

    DEFF Research Database (Denmark)

    Nielsen, Lars Skovby; Sparsø, Jens

    1999-01-01

    This paper addresses the design of asynchronous circuits for low power through an example: a filter bank for a digital hearing aid. The asynchronous design re-implements an existing synchronous circuit which is used in a commercial product. For comparison, both designs have been fabricated...... by numerically small samples). Apart from the improved RAM design, these measures are only viable in an asynchronous design. The principles and techniques explained in this paper are of a general nature, and they apply to the design of asynchronous low-power digital signal-processing circuits in a broader...

  8. Spatio-Temporal Joins on Symbolic Indoor Tracking Data

    DEFF Research Database (Denmark)

    Lu, Hua; Yang, Bin; Jensen, Christian S.

    2011-01-01

    region such as a room or hallway. Based on an analysis on the uncertainty inherent to indoor tracking data, effective join probabilities are formalized and evaluated for object pairs. Efficient two-phase hash-based algorithms are proposed for the point and interval joins. In a filter-and-refine framework...

  9. A test for stationarity of spatio-temporal random fields on planar and spherical domains

    KAUST Repository

    Jun, Mikyoung

    2012-01-01

    A formal test for weak stationarity of spatial and spatio-temporal random fields is proposed. We consider the cases where the spatial domain is planar or spherical, and we do not require distributional assumptions for the random fields. The method can be applied to univariate or to multivariate random fields. Our test is based on the asymptotic normality of certain statistics that are functions of estimators of covariances at certain spatial and temporal lags under weak stationarity. Simulation results for spatial as well as spatio-temporal cases on the two types of spatial domains are reported. We describe the results of testing the stationarity of Pacific wind data, and of testing the axial symmetry of climate model errors for surface temperature using the NOAA GFDL model outputs and the observations from the Climate Research Unit in East Anglia and the Hadley Centre.

  10. Statistical study of spatio-temporal distribution of precursor solar flares associated with major flares

    CERN Document Server

    Gyenge, N; Baranyi, T

    2016-01-01

    The aim of the present investigation is to study the spatio-temporal distribution of precursor flares during the 24-hour interval preceding M- and X-class major flares and the evolution of follower flares. Information on associated (precursor and follower) flares is provided by Reuven Ramaty High Energy Solar Spectroscopic Imager (RHESSI). Flare List, while the major flares are observed by the Geostationary Operational Environmental Satellite (GOES) system satellites between 2002 and 2014. There are distinct evolutionary differences between the spatio-temporal distributions of associated flares in about one day period depending on the type of the main flare. The spatial distribution was characterised by the normalised frequency distribution of the quantity $\\delta$ (the distance between the major flare and its precursor flare normalised by the sunspot group diameter) in four 6-hour time intervals before the major event. The precursors of X-class flares have a double-peaked spatial distribution for more than h...

  11. Travel cost inference from sparse, spatio-temporally correlated time series using markov models

    DEFF Research Database (Denmark)

    Yang, B.; Guo, C.; Jensen, C.S.

    2013-01-01

    of such time series offers insight into the underlying system and enables prediction of system behavior. While the techniques presented in the paper apply more generally, we consider the case of transportation systems and aim to predict travel cost from GPS tracking data from probe vehicles. Specifically, each...... road segment has an associated travel-cost time series, which is derived from GPS data. We use spatio-temporal hidden Markov models (STHMM) to model correlations among different traffic time series. We provide algorithms that are able to learn the parameters of an STHMM while contending...... with the sparsity, spatio-temporal correlation, and heterogeneity of the time series. Using the resulting STHMM, near future travel costs in the transportation network, e.g., travel time or greenhouse gas emissions, can be inferred, enabling a variety of routing services, e.g., eco-routing. Empirical studies...

  12. Robust Spatio-Temporal Signal Recovery from Noisy Counts in Social Media

    CERN Document Server

    Xu, Jun-Ming; Nowak, Robert; Zhu, Xiaojin

    2012-01-01

    Many real-world phenomena can be represented by a spatio-temporal signal: where, when, and how much. Social media is a tantalizing data source for those who wish to monitor such signals. Unlike most prior work, we assume that the target phenomenon is known and we are given a method to count its occurrences in social media. However, counting is plagued by sample bias, incomplete data, and, paradoxically, data scarcity -- issues inadequately addressed by prior work. We formulate signal recovery as a Poisson point process estimation problem. We explicitly incorporate human population bias, time delays and spatial distortions, and spatio-temporal regularization into the model to address the noisy count issues. We present an efficient optimization algorithm and discuss its theoretical properties. We show that our model is more accurate than commonly-used baselines. Finally, we present a case study on wildlife roadkill monitoring, where our model produces qualitatively convincing results.

  13. Spatio-temporal parameters and lower-limb kinematics of turning gait in typically developing children.

    Science.gov (United States)

    Dixon, Philippe C; Stebbins, Julie; Theologis, Tim; Zavatsky, Amy B

    2013-09-01

    Turning is a requirement for most locomotor tasks; however, knowledge of the biomechanical requirements of successful turning is limited. Therefore, the aims of this study were to investigate the spatio-temporal and lower-limb kinematics of 90° turning. Seventeen typically developing children, fitted with full body and multi-segment foot marker sets, having performed both step (outside leg) and spin (inside leg) turning strategies at self-selected velocity, were included in the study. Three turning phases were identified: approach, turn, and depart. Stride velocity and stride length were reduced for both turning strategies for all turning phases (pphases (pgait. Many spatio-temporal differences between turn conditions and phases were also found (pgait disorders in pathological populations, such as children with cerebral palsy.

  14. Spatio-Temporal Analysis of Epidemic Phenomena Using the R Package surveillance

    CERN Document Server

    Meyer, Sebastian; Höhle, Michael

    2014-01-01

    The availability of geocoded health data and the inherent temporal structure of communicable diseases have led to an increased interest in statistical models and software for spatio-temporal data with epidemic features. The open source R package surveillance can handle various levels of aggregation at which infective events have been recorded: individual-level time-stamped geo-referenced data (case reports) in either continuous space or discrete space, as well as counts aggregated by period and region. For each of these data types, the surveillance package implements tools for visualization, likelihoood inference and simulation from recently developed statistical regression frameworks capturing endemic and epidemic dynamics. Altogether, this paper is a guide to the spatio-temporal modeling of epidemic phenomena, exemplified by analyses of public health surveillance data on measles and invasive meningococcal disease.

  15. Bayesian spatio-temporal modeling of particulate matter concentrations in Peninsular Malaysia

    Science.gov (United States)

    Manga, Edna; Awang, Norhashidah

    2016-06-01

    This article presents an application of a Bayesian spatio-temporal Gaussian process (GP) model on particulate matter concentrations from Peninsular Malaysia. We analyze daily PM10 concentration levels from 35 monitoring sites in June and July 2011. The spatiotemporal model set in a Bayesian hierarchical framework allows for inclusion of informative covariates, meteorological variables and spatiotemporal interactions. Posterior density estimates of the model parameters are obtained by Markov chain Monte Carlo methods. Preliminary data analysis indicate information on PM10 levels at sites classified as industrial locations could explain part of the space time variations. We include the site-type indicator in our modeling efforts. Results of the parameter estimates for the fitted GP model show significant spatio-temporal structure and positive effect of the location-type explanatory variable. We also compute some validation criteria for the out of sample sites that show the adequacy of the model for predicting PM10 at unmonitored sites.

  16. DSTiPE Algorithm for Fuzzy Spatio-Temporal Risk Calculation in Wireless Environments

    Energy Technology Data Exchange (ETDEWEB)

    Kurt Derr; Milos Manic

    2008-09-01

    Time and location data play a very significant role in a variety of factory automation scenarios, such as automated vehicles and robots, their navigation, tracking, and monitoring, to services of optimization and security. In addition, pervasive wireless capabilities combined with time and location information are enabling new applications in areas such as transportation systems, health care, elder care, military, emergency response, critical infrastructure, and law enforcement. A person/object in proximity to certain areas for specific durations of time may pose a risk hazard either to themselves, others, or the environment. This paper presents a novel fuzzy based spatio-temporal risk calculation DSTiPE method that an object with wireless communications presents to the environment. The presented Matlab based application for fuzzy spatio-temporal risk cluster extraction is verified on a diagonal vehicle movement example.

  17. Analysis Method of Traffic Congestion Degree Based on Spatio-Temporal Simulation

    Directory of Open Access Journals (Sweden)

    Shulin He

    2012-04-01

    Full Text Available The purpose of this research is to design and implement a road traffic congestion and traffic patterns simulation (TPS model and integrate it with extension-information model (EIM. The problems of road traffic simulation and control are studied according to the method of extension information model, and from the spatio-temporal analysis point of view. The rules of the traffic simulation from existence to evolution are analyzed using theories. Based on this study, the concept of traffic system entropy is introduced, and resulted in the establishment of a fundamental frame work for the road traffic simulation system based on extension spatio-temporal information system. Moreover, a practicable methodology is presented.

  18. An Enhanced Framework for Improving Spatio-Temporal Queries for Global Positioning Systems

    Directory of Open Access Journals (Sweden)

    Jalal Atoum

    2013-03-01

    Full Text Available To efficiently process continuous spatio-temporal queries, we need to efficiently and effectively handle large number of moving objects and continuous updates on these queries. In this paper, we propose a framework that employs a new indexing algorithm that is built on top of SQL Server 2008 and avoid the overhead related to R-Tree indexing. To answer range queries, we utilize dynamic materialized view concept to efficiently handle update queries. We propose an adaptive safe region to reduce communication costs between the client and the server and to minimize position update load. Caching of results was utilized to enhance the overall performance of the framework. To handle concurrent spatio-temporal queries, we utilize publish/subscribe paradigm to group similar queries and efficiently process these requests. Experiments show that the overall proposed framework performance was able to outperform R-Tree index and produce promising and satisfactory results

  19. A model for optimizing file access patterns using spatio-temporal parallelism

    Energy Technology Data Exchange (ETDEWEB)

    Boonthanome, Nouanesengsy [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Patchett, John [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Geveci, Berk [Kitware Inc., Clifton Park, NY (United States); Ahrens, James [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Bauer, Andy [Kitware Inc., Clifton Park, NY (United States); Chaudhary, Aashish [Kitware Inc., Clifton Park, NY (United States); Miller, Ross G. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Shipman, Galen M. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Williams, Dean N. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2013-01-01

    For many years now, I/O read time has been recognized as the primary bottleneck for parallel visualization and analysis of large-scale data. In this paper, we introduce a model that can estimate the read time for a file stored in a parallel filesystem when given the file access pattern. Read times ultimately depend on how the file is stored and the access pattern used to read the file. The file access pattern will be dictated by the type of parallel decomposition used. We employ spatio-temporal parallelism, which combines both spatial and temporal parallelism, to provide greater flexibility to possible file access patterns. Using our model, we were able to configure the spatio-temporal parallelism to design optimized read access patterns that resulted in a speedup factor of approximately 400 over traditional file access patterns.

  20. Diverse spatio-temporal dynamical patterns of p53 and cell fate decisions

    Science.gov (United States)

    Clairambault, Jean; Eliaš, Ján

    2016-06-01

    The protein p53 as a tumour suppressor protein accumulates in cells in response to DNA damage and transactivates a large variety of genes involved in apoptosis, cell cycle regulation and numerous other processes. Recent biological observations suggest that specific spatio-temporal dynamical patterns of p53 may be associated with specific cellular response, and thus the spatio-temporal heterogeneity of the p53 dynamics contributes to the overall complexity of p53 signalling. Reaction-diffusion equations taking into account spatial representation of the cell and motion of the species inside the cell can be used to model p53 protein network and could be thus of some help to biologists and pharmacologists in anticancer treatment.

  1. Spatio-temporal map generalizations with the hierarchical Voronoi data structure

    DEFF Research Database (Denmark)

    Mioc, Darka; Anton, François; Gold, Christopher M.;

    implemented in commercial GIS systems. In this research, we used the Voronoi spatial data model for map generalizations. We were able to demonstrate that the map generalization does not affect only spatial objects (points, lines or polygons), but also the events corresponding to the creation and modification......Map generalization leads to simplified maps that are needed for specific applications. However, in the map generalization process, the processing of the map objects and the operations applied to achieve this simplified map are usually lost. This is due to the transaction processing systems...... of map objects, together with their temporal and spatial adjacency relationships. In this paper, we present new solutions to the problems of spatio-temporal generalizations using the hierarchical Voronoi spatio-temporal data structure. The application of the hierarchical Voronoi data structure presented...

  2. Analysis of non-ergodic behaviour in spatio-temporal coherence properties of speckle light

    Science.gov (United States)

    Réfrégier, Philippe

    Spatio-temporal coherence properties of light scattered by rough surfaces that leads to speckle fluctuations are analysed. It is demonstrated that the scattered light is non-ergodic with the disorder due to the scattering process. Although the mutual coherence matrix vanishes with isotropic polarization fluctuations, it is shown that spatio-temporal coherence properties can be described with interference experiments that can be obtained between different speckles of the scattered light. For non-singular scattering processes, the maximal value of the modulus of the Wolf degree of coherence is analysed in the spatial time domain. This approach is also applied to totally unpolarized incident light with an isotropic and spatially independent scattering process. The mean value and the standard deviation of the Wolf degree of coherence are then determined from the coherence properties of the incident light.

  3. SPATIO-TEMPORAL CHAOTIC SYNCHRONIZATION FOR MODES COUPLED TWO GINZBURG-LANDAU EQUATIONS

    Institute of Scientific and Technical Information of China (English)

    HU Man-feng; XU Zhen-yuan

    2006-01-01

    On the basis of numerical computation, the conditions of the modes coupling are proposed, and the high-frequency modes are coupled, but the low frequency modes are uncoupled. It is proved that there exist an absorbing set and a global finite dimensional attractor which is compact and connected in the function space for the high-frequency modes coupled two Ginzburg-Landau equations(MGLE). The trajectory of driver equation may be spatio-temporal chaotic. One associates with MGLE, a truncated form of the equations. The prepared equations persist in long time dynamical behavior of MGLE.MGLE possess the squeezing properties under some conditions. It is proved that the complete spatio-temporal chaotic synchronization for MGLE can occur. Synchronization phenomenon of infinite dimensional dynamical system (IFDDS) is illustrated on the mathematical theory qualitatively. The method is different from Liapunov function methods and approximate linear methods.

  4. Spatio-temporal pattern of viral meningitis in Michigan, 1993-2001

    Science.gov (United States)

    Greene, Sharon K.; Schmidt, Mark A.; Stobierski, Mary Grace; Wilson, Mark L.

    2005-05-01

    To characterize Michigan's high viral meningitis incidence rates, 8,803 cases from 1993-2001 were analyzed for standard epidemiological indices, geographic distribution, and spatio-temporal clusters. Blacks and infants were found to be high-risk groups. Annual seasonality and interannual variability in epidemic magnitude were apparent. Cases were concentrated in southern Michigan, and cumulative incidence was correlated with population density at the county level (r=0.45, p<0.001). Kulldorff's Scan test identified the occurrence of spatio-temporal clusters in Lower Michigan during July-October 1998 and 2001 (p=0.01). More extensive data on cases, laboratory isolates, sociodemographics, and environmental exposures should improve detection and enhance the effectiveness of a Space-Time Information System aimed at prevention.

  5. Can infovis tools support the analysis of spatio-temporal diffusion patterns in historic architecture?

    OpenAIRE

    Blaise, Jean-Yves; Dudek, Iwona

    2013-01-01

    International audience This paper's main claim is that analytical reasoning on spatio-temporal diffusion patterns requires a step into abstraction that traditional figurative solutions like maps or 3D virtual models do not encourage. Accordingly, we investigate alternative research practices, namely infovis (Information visualisation) and visual analytics, where the focus is put on revealing patterns of change, and more generally on gaining insight on individuals and collections through vi...

  6. Spatio-TemporalMetasurface for Real-time 2-D Spectrum Analysis

    OpenAIRE

    Gupta, Shulabh; Caloz, Christophe

    2014-01-01

    A spatio-temporal metasurface is proposed to decompose in real time the temporal frequencies of electromagnetic waves into spatial frequencies onto a two-dimensional plane. The metasurface is analyzed and demonstrated using Fourier analysis. The required transmittance function is derived from an equivalent free-space optical system consisting of the cascade combination of a wedge, a diffraction grating and a focusing lens. The metasurface must exhibit both multi-resonance over a broad bandwid...

  7. Sensing Solutions for Collecting Spatio-Temporal Data for Wildlife Monitoring Applications: A Review

    OpenAIRE

    Toxopeus, Bert A. G.; Skidmore, Andrew K.; Havinga, Paul J. M.; Nirvana Meratnia; Mitra Baratchi,

    2013-01-01

    Movement ecology is a field which places movement as a basis for understanding animal behavior. To realize this concept, ecologists rely on data collection technologies providing spatio-temporal data in order to analyze movement. Recently, wireless sensor networks have offered new opportunities for data collection from remote places through multi-hop communication and collaborative capability of the nodes. Several technologies can be used in such networks for sensing purposes and for collecti...

  8. Spatio-temporal changes of urban fringe in tokyo metropolitan area

    OpenAIRE

    Kikuchi, Toshio; Obara, Norihiro

    2004-01-01

    In this paper we made a point of urban fringe movement as the reflection of urbanisation in Tokyo metropolitan area, and discussed about driving forces on such movement. According to spatio-temporal distribution of agricultural and urban land uses, we could identify urban fringe movement and its sectorial differences, and revealed ten factors of them: land conditions and their improvement, transportation network, the importance of rice farming, accessibility to the metropolitan centre and off...

  9. Economic Development And Transfrontier Shipments Of Waste In Poland – Spatio-Temporal Analysis

    OpenAIRE

    Antczak Elżbieta

    2014-01-01

    The aim of the paper is to apply the spatio-temporal Environmental Kuznets Curve (SpEKC) to test the relationship between economic growth and the amount of collected mixed municipal waste. The analysis was conducted at the level of sixty-six Polish sub-regions. The study contained selected environmental indicators. The dependent variable - the amount of municipal waste generated in kilograms per capita characterized the state of the environment. The GDP per capita in constant prices (as an ex...

  10. Spatio-temporal soil moisture patterns - A meta-analysis using plot to catchment scale data

    OpenAIRE

    W. Korres; Reichenau, T. G.; Schneider, K; P. Fiener; Koyama, C. N.; Bogena, Heye; Cornelissen, T.; Baatz, R.; M. Herbst; B. Diekkrüger; H. Vereecken

    2015-01-01

    Soil moisture is a key variable in hydrology, meteorology and agriculture. It is influenced by many factors, such as topography, soil properties, vegetation type, management, and meteorological conditions. The role of these factors in controlling the spatial patterns and temporal dynamics is often not well known. The aim of the current study is to analyze spatio-temporal soil moisture patterns acquired across a variety of land use types, on different spatial scales (plot to meso-scale catchme...

  11. Analysis Method of Traffic Congestion Degree Based on Spatio-Temporal Simulation

    OpenAIRE

    Shulin He

    2012-01-01

    The purpose of this research is to design and implement a road traffic congestion and traffic patterns simulation (TPS) model and integrate it with extension-information model (EIM). The problems of road traffic simulation and control are studied according to the method of extension information model, and from the spatio-temporal analysis point of view. The rules of the traffic simulation from existence to evolution are analyzed using theories. Based on this study, the concept of traffic syst...

  12. On the spatio-temporal analysis of hydrological droughts from global hydrological models

    OpenAIRE

    Corzo Perez, G.A.; M. H. J. van Huijgevoort; F. Voß; H. A. J. van Lanen

    2011-01-01

    The recent concerns for world-wide extreme events related to climate change have motivated the development of large scale models that simulate the global water cycle. In this context, analysis of hydrological extremes is important and requires the adaptation of identification methods used for river basin models. This paper presents two methodologies that extend the tools to analyze spatio-temporal drought development and characteristics us...

  13. Spatio-Temporal Variations and Source Apportionment of Water Pollution in Danjiangkou Reservoir Basin, Central China

    OpenAIRE

    Pan Chen; Lan Li; Hongbin Zhang

    2015-01-01

    Understanding the spatio-temporal variation and the potential source of water pollution could greatly improve our knowledge of human impacts on the environment. In this work, data of 11 water quality indices were collected during 2012–2014 at 10 monitoring sites in the mainstream and major tributaries of the Danjiangkou Reservoir Basin, Central China. The fuzzy comprehensive assessment (FCA), the cluster analysis (CA) and the discriminant analysis (DA) were used to assess the water pollutio...

  14. Spatio-temporal regulation of ADAR editing during development in porcine neural tissues

    DEFF Research Database (Denmark)

    Venø, Morten Trillingsgaard; Bramsen, Jesper Bertram; Bendixen, Christian;

    2012-01-01

    Editing by ADAR enzymes is essential for mammalian life. Still, knowledge of the spatio-temporal editing patterns in mammals is limited. By use of 454 amplicon sequencing we examined the editing status of 12 regionally extracted mRNAs from porcine developing brain encompassing a total of 64 putat...... putative ADAR editing sites. In total 24 brain tissues, dissected from up to five regions from embryonic gestation day 23, 42, 60, 80, 100 and 115, were examined for editing....

  15. TRAVELLING FRONT SOLUTIONS IN A DIFFUSIVE VECTOR DISEASE MODEL WITH SPATIO-TEMPORAL DELAY

    Institute of Scientific and Technical Information of China (English)

    2012-01-01

    This paper is concerned with travelling front solutions to a vector disease model with a spatio-temporal delay incorporated as an integral convolution over all the past time up to now and the whole one-dimensional spatial domain R.When the delay kernel is assumed to be the strong generic kernel,using the linear chain techniques and the geometric singular perturbation theory,the existence of travelling front solutions is shown for small delay.

  16. Analysis of spatio-temporal variations in stroke incidence and case-fatality in Hong Kong

    OpenAIRE

    Pui Hing Chau; Jean Woo; Goggins, William B; Moses Wong; Kam Che Chan; Ho, Suzanne C.

    2011-01-01

    Geographical variations in stroke incidence and case-fatality have been documented worldwide. This study examines whether there are spatio-temporal variations in stroke incidence and case-fatality in Hong Kong and attempts to determine to what extent socioeconomic status (SES) and healthcare provision account for these variations. Residence-based hospital discharge data from the Hospital Authority (HA) in Hong Kong were geo-referenced and used to examine incidence rates and case-fatality rate...

  17. Emergence of Complex Spatio-Temporal Behavior in Nonlinear Field Theories

    CERN Document Server

    Gleiser, M; Gleiser, Marcelo; Howell, Rafael C.

    2006-01-01

    We investigate the emergence of time-dependent nonperturbative configurations during the evolution of nonlinear scalar field models with symmetric and asymmetric double-well potentials. Complex spatio-temporal behavior emerges as the system seeks to establish equipartition after a fast quench. We show that fast quenches may dramatically modify the decay rate of metastable states in first order phase transitions. We briefly suggest possible applications incondensed matter systems and early universe cosmology.

  18. Determining Spatio-Temporal Cadastral Data Requirement for Infrastructure of Ladm for Turkey

    Science.gov (United States)

    Alkan, M.; Polat, Z. A.

    2016-06-01

    Nowadays, the nature of land title and cadastral (LTC) data in the Turkey is dynamic from a temporal perspective which depends on the LTC operations. Functional requirements with respect to the characteristics are investigated based upon interviews of professionals in public and private sectors. These are; Legal authorities, Land Registry and Cadastre offices, Highway departments, Foundations, Ministries of Budget, Transportation, Justice, Public Works and Settlement, Environment and Forestry, Agriculture and Rural Affairs, Culture and Internal Affairs, State Institute of Statistics (SIS), execution offices, tax offices, real estate offices, private sector, local governments and banks. On the other hand, spatio-temporal LTC data very important component for creating infrastructure of Land Administration Model (LADM). For this reason, spatio-temporal LTC data needs for LADM not only updated but also temporal. The investigations ended up with determine temporal analyses of LTC data, traditional LTC system and tracing temporal analyses in traditional LTC system. In the traditional system, the temporal analyses needed by all these users could not be performed in a rapid and reliable way. The reason for this is that the traditional LTC system is a manual archiving system. The aims and general contents of this paper: (1) define traditional LTC system of Turkey; (2) determining the need for spatio-temporal LTC data and analyses for core domain model for LADM. As a results of temporal and spatio-temporal analysis LTC data needs, new system design is important for the Turkish LADM model. Designing and realizing an efficient and functional Temporal Geographic Information Systems (TGIS) is inevitable for the Turkish LADM core infrastructure. Finally this paper outcome is creating infrastructure for design and develop LADM for Turkey.

  19. DETERMINING SPATIO-TEMPORAL CADASTRAL DATA REQUIREMENT FOR INFRASTRUCTURE OF LADM FOR TURKEY

    Directory of Open Access Journals (Sweden)

    M. Alkan

    2016-06-01

    Full Text Available Nowadays, the nature of land title and cadastral (LTC data in the Turkey is dynamic from a temporal perspective which depends on the LTC operations. Functional requirements with respect to the characteristics are investigated based upon interviews of professionals in public and private sectors. These are; Legal authorities, Land Registry and Cadastre offices, Highway departments, Foundations, Ministries of Budget, Transportation, Justice, Public Works and Settlement, Environment and Forestry, Agriculture and Rural Affairs, Culture and Internal Affairs, State Institute of Statistics (SIS, execution offices, tax offices, real estate offices, private sector, local governments and banks. On the other hand, spatio-temporal LTC data very important component for creating infrastructure of Land Administration Model (LADM. For this reason, spatio-temporal LTC data needs for LADM not only updated but also temporal. The investigations ended up with determine temporal analyses of LTC data, traditional LTC system and tracing temporal analyses in traditional LTC system. In the traditional system, the temporal analyses needed by all these users could not be performed in a rapid and reliable way. The reason for this is that the traditional LTC system is a manual archiving system. The aims and general contents of this paper: (1 define traditional LTC system of Turkey; (2 determining the need for spatio-temporal LTC data and analyses for core domain model for LADM. As a results of temporal and spatio-temporal analysis LTC data needs, new system design is important for the Turkish LADM model. Designing and realizing an efficient and functional Temporal Geographic Information Systems (TGIS is inevitable for the Turkish LADM core infrastructure. Finally this paper outcome is creating infrastructure for design and develop LADM for Turkey.

  20. A hierarchical Bayesian spatio-temporal model for extreme precipitation events

    KAUST Repository

    Ghosh, Souparno

    2011-03-01

    We propose a new approach to model a sequence of spatially distributed time series of extreme values. Unlike common practice, we incorporate spatial dependence directly in the likelihood and allow the temporal component to be captured at the second level of hierarchy. Inferences about the parameters and spatio-temporal predictions are obtained via MCMC technique. The model is fitted to a gridded precipitation data set collected over 99 years across the continental U.S. © 2010 John Wiley & Sons, Ltd..

  1. Joint Recognition and Segmentation of Actions via Probabilistic Integration of Spatio-Temporal Fisher Vectors

    OpenAIRE

    Carvajal, Johanna; McCool, Chris; Lovell, Brian; Sanderson, Conrad

    2016-01-01

    We propose a hierarchical approach to multi-action recognition that performs joint classification and segmentation. A given video (containing several consecutive actions) is processed via a sequence of overlapping temporal windows. Each frame in a temporal window is represented through selective low-level spatio-temporal features which efficiently capture relevant local dynamics. Features from each window are represented as a Fisher vector, which captures first and second order statistics. In...

  2. On the expected value and variance for an estimator of the spatio-temporal product density function

    DEFF Research Database (Denmark)

    Rodríguez-Corté, Francisco J.; Ghorbani, Mohammad; Mateu, Jorge;

    Second-order characteristics are used to analyse the spatio-temporal structure of the underlying point process, and thus these methods provide a natural starting point for the analysis of spatio-temporal point process data. We restrict our attention to the spatio-temporal product density function......, and develop a non-parametric edge-corrected kernel estimate of the product density under the second-order intensity-reweighted stationary hypothesis. The expectation and variance of the estimator are obtained, and closed form expressions derived under the Poisson case. A detailed simulation study is presented...... to compare our close expression for the variance with estimated ones for Poisson cases. The simulation experiments show that the theoretical form for the variance gives acceptable values, which can be used in practice. Finally, we apply the resulting estimator to data on the spatio-temporal distribution...

  3. Short-term spatio-temporal wind power forecast in robust look-ahead power system dispatch

    KAUST Repository

    Xie, Le

    2014-01-01

    We propose a novel statistical wind power forecast framework, which leverages the spatio-temporal correlation in wind speed and direction data among geographically dispersed wind farms. Critical assessment of the performance of spatio-temporal wind power forecast is performed using realistic wind farm data from West Texas. It is shown that spatio-temporal wind forecast models are numerically efficient approaches to improving forecast quality. By reducing uncertainties in near-term wind power forecasts, the overall cost benefits on system dispatch can be quantified. We integrate the improved forecast with an advanced robust look-ahead dispatch framework. This integrated forecast and economic dispatch framework is tested in a modified IEEE RTS 24-bus system. Numerical simulation suggests that the overall generation cost can be reduced by up to 6% using a robust look-ahead dispatch coupled with spatio-temporal wind forecast as compared with persistent wind forecast models. © 2013 IEEE.

  4. Investigating fine-scale spatio-temporal predator-prey patterns in dynamic marine ecosystems: a functional data analysis approach

    NARCIS (Netherlands)

    Embling, C.B.; Illian, J.; Armstrong, E.; van der Kooij, J.; Sharples, J.; Camphuysen, K.C.J.; Scott, B.E.

    2012-01-01

    1. Spatial management of marine ecosystems requires detailed knowledge of spatio-temporal mechanisms linking physical and biological processes. Tidal currents, the main driver of ecosystem dynamics in temperate coastal ecosystems, influence predator foraging ecology by affecting prey distribution an

  5. A three-dimensional spatio-temporal EEG pattern analyzing system

    Institute of Scientific and Technical Information of China (English)

    LIU Hesheng; GAO Xiaorong; YANG Fusheng

    2003-01-01

    Spatio-temporal pattern analysis of EEG is an important tool in brain research. An EEG pattern analysis system based on a hierarchical multi-method approach is proposed here. The system consists of multiple steps including extraction of target signal, acquisition of intracranial electric activity distribution, adaptive segmentation of EEG and spatio-temporal pattern recognition. Some modern signal processing methods such as common spatial subspace decomposition, hidden Markov model are adopted. This paper also proposes an algorithm named LORETA-FOCUSS to estimate the current density inside the brain with a high spatial resolution. Microstate analysis of EEG is extended to the 3-D situation. The system was applied to the brain computer interface problem and achieved the highest accuracy of 88.89% with an average accuracy of 81.48% when classifying two imaginary movement tasks, while the data were not manually pre-selected. The result has proved spatio-temporal EEG pattern analysis is an efficient way in brain research.

  6. Identifying causal gateways and mediators in complex spatio-temporal systems

    Science.gov (United States)

    Runge, Jakob; Petoukhov, Vladimir; Donges, Jonathan; Hlinka, Jaroslav; Jajcay, Nikola; Vejmelka, Martin; Hartman, David; Marwan, Norbert; Palus, Milan; Kurths, Jürgen

    2016-04-01

    Identifying regions important for spreading and mediating perturbations is crucial to assess the susceptibilities of spatio-temporal complex systems such as the Earth's climate to volcanic eruptions, extreme events or geoengineering. Here a data-driven approach is introduced based on a dimension reduction, causal reconstruction, and novel network measures based on causal effect theory that go beyond standard complex network tools by distinguishing direct from indirect pathways. Applied to a data set of atmospheric dynamics, the method identifies several strongly uplifting regions acting as major gateways of perturbations spreading in the atmosphere. Additionally, the method provides a stricter statistical approach to pathways of atmospheric teleconnections, yielding insights into the Pacific-Indian Ocean interaction relevant for monsoonal dynamics. The novel causal interaction perspective provides a complementary approach to simulations or experiments for understanding the functioning of complex spatio-temporal systems with potential applications in increasing their resilience to shocks or extreme events. Reference: Runge, J., Petoukhov, V., Donges, J. F., Hlinka, J., Jajcay, N., Vejmelka, M., Hartman, D., Marwan, M., Paluš, M., Kurths, J. (2015). Identifying causal gateways and mediators in complex spatio-temporal systems. Nature Communications, 6, 8502. doi:10.1038/ncomms9502

  7. Nonparametric evaluation of dynamic disease risk: a spatio-temporal kernel approach.

    Directory of Open Access Journals (Sweden)

    Zhijie Zhang

    Full Text Available Quantifying the distributions of disease risk in space and time jointly is a key element for understanding spatio-temporal phenomena while also having the potential to enhance our understanding of epidemiologic trajectories. However, most studies to date have neglected time dimension and focus instead on the "average" spatial pattern of disease risk, thereby masking time trajectories of disease risk. In this study we propose a new idea titled "spatio-temporal kernel density estimation (stKDE" that employs hybrid kernel (i.e., weight functions to evaluate the spatio-temporal disease risks. This approach not only can make full use of sample data but also "borrows" information in a particular manner from neighboring points both in space and time via appropriate choice of kernel functions. Monte Carlo simulations show that the proposed method performs substantially better than the traditional (i.e., frequency-based kernel density estimation (trKDE which has been used in applied settings while two illustrative examples demonstrate that the proposed approach can yield superior results compared to the popular trKDE approach. In addition, there exist various possibilities for improving and extending this method.

  8. Spatio-temporal characterization techniques of high-power femtosecond laser chains

    Science.gov (United States)

    Gallet, Valentin; Pariente, Gustave; Kahaly, Subhendu; Gobert, Olivier; Quéré, Fabien

    2014-03-01

    In this letter, we propose two techniques capable of spatio-temporally characterizing high-power femtosecond laser chains. We demonstrate a new implementation of SEA TADPOLE. To avoid the problems induced by the the significant spatial jittering of the focal spot on high-power laser chains, our setup is adapted to collimated beams. In addition, a fibered light source is also used to correct the phase fluctuations. This experimental setup allows identifying any spatiotemporal distortions such as the pulse front tilt for instance. In this paper, to the best of our knowledge, we present the very first spatio-temporal characterization done on a TW laser. However, a SEA TADPOLE measurement is not immediate since it requires scanning the beam over the two transverse dimensions which prevent us from studying the shot-to-shot laser fluctuations. This is why, we developed MUFFIN, a single-shot technique capable of spatio-temporally characterizing a laser pulse along its two transverse dimensions. First experimental results obtained with this technique are presented here.

  9. Evaluating the spatio-temporal factors that structure network parameters of plant-herbivore interactions.

    Directory of Open Access Journals (Sweden)

    Antonio López-Carretero

    Full Text Available Despite the dynamic nature of ecological interactions, most studies on species networks offer static representations of their structure, constraining our understanding of the ecological mechanisms involved in their spatio-temporal stability. This is the first study to evaluate plant-herbivore interaction networks on a small spatio-temporal scale. Specifically, we simultaneously assessed the effect of host plant availability, habitat complexity and seasonality on the structure of plant-herbivore networks in a coastal tropical ecosystem. Our results revealed that changes in the host plant community resulting from seasonality and habitat structure are reflected not only in the herbivore community, but also in the emergent properties (network parameters of the plant-herbivore interaction network such as connectance, selectiveness and modularity. Habitat conditions and periods that are most stressful favored the presence of less selective and susceptible herbivore species, resulting in increased connectance within networks. In contrast, the high degree of selectivennes (i.e. interaction specialization and modularity of the networks under less stressful conditions was promoted by the diversification in resource use by herbivores. By analyzing networks at a small spatio-temporal scale we identified the ecological factors structuring this network such as habitat complexity and seasonality. Our research offers new evidence on the role of abiotic and biotic factors in the variation of the properties of species interaction networks.

  10. Video Event Detection: From Subvolume Localization To Spatio-Temporal Path Search.

    Science.gov (United States)

    Tran, Du; Yuan, Junsong; Forsyth, David

    2013-07-23

    Although sliding window-based approaches have been quite successful in detecting objects in images, it is not a trivial problem to extend them to detecting events in videos. We propose to search for spatio-temporal paths for video event detection. This new formulation can accurately detect and locate video events in cluttered and crowded scenes, and is robust to camera motions. It can also well handle the scale, shape, and intra-class variations of the event. Compared to event detection using spatio-temporal sliding windows, the spatio-temporal paths correspond to the event trajectories in the video space, thus can better handle events composed by moving objects. We prove that the proposed search algorithm can achieve the global optimal solution with the lowest complexity. Experiments are conducted on realistic video datasets with different event detection tasks, such as anomaly event detection, walking person detection, and running detection. Our proposed method is compatible to different types of video features or object detectors and robust to false and missed local detections. It significantly improves the overall detection and localization accuracy over the state-of-the-art methods. PMID:23898011

  11. Spatio-Temporal Change Modeling of Lulc: a Semantic Kriging Approach

    Science.gov (United States)

    Bhattacharjee, S.; Ghosh, S. K.

    2015-07-01

    Spatio-temporal land-use/ land-cover (LULC) change modeling is important to forecast the future LULC distribution, which may facilitate natural resource management, urban planning, etc. The spatio-temporal change in LULC trend often exhibits non-linear behavior, due to various dynamic factors, such as, human intervention (e.g., urbanization), environmental factors, etc. Hence, proper forecasting of LULC distribution should involve the study and trend modeling of historical data. Existing literatures have reported that the meteorological attributes (e.g., NDVI, LST, MSI), are semantically related to the terrain. Being influenced by the terrestrial dynamics, the temporal changes of these attributes depend on the LULC properties. Hence, incorporating meteorological knowledge into the temporal prediction process may help in developing an accurate forecasting model. This work attempts to study the change in inter-annual LULC pattern and the distribution of different meteorological attributes of a region in Kolkata (a metropolitan city in India) during the years 2000-2010 and forecast the future spread of LULC using semantic kriging (SemK) approach. A new variant of time-series SemK is proposed, namely Rev-SemKts to capture the multivariate semantic associations between different attributes. From empirical analysis, it may be observed that the augmentation of semantic knowledge in spatio-temporal modeling of meteorological attributes facilitate more precise forecasting of LULC pattern.

  12. A new method for spatio-temporal prediction of rainfall- induced landslide

    Institute of Scientific and Technical Information of China (English)

    DING; Jixin; YANG; Zhifa; SHANG; Yanjun; ZHOU; Shenghua; YIN; Juntao

    2006-01-01

    Geological condition and rainfall are two most principal conditions inducing landslides in the Chongqing region. By analyzing the forming conditions of rainfall-induced landslides, a new method for spatio-temporal prediction of rainfall-induced landslide is brought forward on the basis of grading and overlapping geological condition and rainfall factor in this paper. At first, semi-quantitative assessment and grading for the geological condition of a certain area or slope can be carried out with the multi-factor interactive matrix. Then the severity of rainfall in that area is grading according to the maximum daily rainfall and the total rainfall in a rainfall course. Finally, the "landslide probability judgement factor" can be worked out through grading and overlapping "geological condition influencing factor" and "rainfall influencing factor", by which the landslide can be graded into 4 grades, they are landslide extremely easily happening, landslide easily happening, landslide difficultly happening and landslide hardly ever happening respectively. More accurate spatio-temporal prediction of rainfall-induced landslides can come true on the ground of detailed geological survey of some dangerous slopes in an area and more precise weather forecast. Finally, the reliability and feasibility of carrying out the spatio-temporal prediction of rainfall-induced landslides with the method of "two factors" grading and overlapping are validated by the example of Jipazi landslide.

  13. Ontology Driven Analysis of Spatio-temporal Phenomena, Aimed At Spatial Planning And Environmental Forecasting

    Science.gov (United States)

    Iwaniak, A.; Łukowicz, J.; Strzelecki, M.; Kaczmarek, I.

    2013-10-01

    Spatial planning is a crucial area for balancing civilization development with environmental protection. Spatial planning has a multidisciplinary nature. It must take into account the dynamics of the processes, which could affect the integrity of the environmental system. That is why we need a new approach to modelling phenomena occurring in space. Such approach is offered by ontologies, based on Description Logic (DL) and related to inference systems. Ontology is a system for the knowledge representation, including conceptual scheme and based on this scheme representation of reality. Ontologies can be enriched with additional logical systems. The authors present a way of building domain ontologies for spatial planning, including the representation of spatio-temporal phenomena. Description Logic is supplemented by structures of temporal logic. As a result, the analysis for exploring the topological relations between spatial objects will be extended to include temporal relationships: coincidence, precedence and succession, cause and effect relationship. Spatio-temporal models with temporal logic structures, encoded in ontologies, could be a subject of inference process, performed by semantic reasoners (reasoner engines). Spatio-temporal representations are offered, by so-called upper ontologies, such as GFO, BFO, OCHRE and others. Temporal structures provided in such ontologies, are useful for the analysis of data obtained from environmental and development monitoring systems and for description and representation of historical phenomena. They allow creating the models and scenarios of expected spatial transformation. They will support analysis for spatial development design, decision-making in spatial planning and forecasting of environmental impact.

  14. Oversaturated part-based visual tracking via spatio-temporal context learning.

    Science.gov (United States)

    Liu, Wei; Li, Jicheng; Shi, Zhiguang; Chen, Xiaotian; Chen, Xiao

    2016-09-01

    Partial occlusion is one of the key challenging factors in a robust visual tracking method. To solve this issue, part-based trackers are widely explored; most of them are computationally expensive and therefore infeasible for real-time applications. Context information around the target has been used in tracking, which was recently renewed by a spatio-temporal context (STC) tracker. The fast Fourier transform adopted in STC equips it with high efficiency. However, the global context used in STC alleviates the performance when dealing with occlusion. In this paper, we propose an oversaturated part-based tracker based on spatio-temporal context learning, which tracks objects based on selected parts with spatio-temporal context learning. Furthermore, a structural layout constraint and a novel model update strategy are utilized to enhance the tracker's anti-occlusion ability and to deal with other appearance changes effectively. Extensive experimental results demonstrate our tracker's superior robustness against the original STC and other state-of-art methods. PMID:27607271

  15. Constructing a raster-based spatio-temporal hierarchical data model for marine fisheries application

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Marine information has been increasing quickly. The traditional database technologies have disadvantages in manipulating large amounts of marine information which relates to the position in 3-D with the time. Recently, greater emphasis has been placed on GIS (geographical information system)to deal with the marine information. The GIS has shown great success for terrestrial applications in the last decades, but its use in marine fields has been far more restricted. One of the main reasons is that most of the GIS systems or their data models are designed for land applications. They cannot do well with the nature of the marine environment and for the marine information. And this becomes a fundamental challenge to the traditional GIS and its data structure. This work designed a data model,the raster-based spatio-temporal hierarchical data model (RSHDM), for the marine information system, or for the knowledge discovery from spatio-temporal data, which bases itself on the nature of the marine data and overcomes the shortages of the current spatio-temporal models when they are used in the field. As an experiment, the marine fishery data warehouse (FDW) for marine fishery management was set up, which was based on the RSHDM. The experiment proved that the RSHDM can do well with the data and can extract easily the aggregations that the management needs at different levels.

  16. Decoding-Accuracy-Based Sequential Dimensionality Reduction of Spatio-Temporal Neural Activities

    Science.gov (United States)

    Funamizu, Akihiro; Kanzaki, Ryohei; Takahashi, Hirokazu

    Performance of a brain machine interface (BMI) critically depends on selection of input data because information embedded in the neural activities is highly redundant. In addition, properly selected input data with a reduced dimension leads to improvement of decoding generalization ability and decrease of computational efforts, both of which are significant advantages for the clinical applications. In the present paper, we propose an algorithm of sequential dimensionality reduction (SDR) that effectively extracts motor/sensory related spatio-temporal neural activities. The algorithm gradually reduces input data dimension by dropping neural data spatio-temporally so as not to undermine the decoding accuracy as far as possible. Support vector machine (SVM) was used as the decoder, and tone-induced neural activities in rat auditory cortices were decoded into the test tone frequencies. SDR reduced the input data dimension to a quarter and significantly improved the accuracy of decoding of novel data. Moreover, spatio-temporal neural activity patterns selected by SDR resulted in significantly higher accuracy than high spike rate patterns or conventionally used spatial patterns. These results suggest that the proposed algorithm can improve the generalization ability and decrease the computational effort of decoding.

  17. Characteristics, processes, and causes of the spatio-temporal variabilities of the East Asian monsoon system

    Science.gov (United States)

    Huang, Ronghui; Chen, Jilong; Wang, Lin; Lin, Zhongda

    2012-09-01

    Recent advances in the study of the characteristics, processes, and causes of spatio-temporal variabilities of the East Asian monsoon (EAM) system are reviewed in this paper. The understanding of the EAM system has improved in many aspects: the basic characteristics of horizontal and vertical structures, the annual cycle of the East Asian summer monsoon (EASM) system and the East Asian winter monsoon (EAWM) system, the characteristics of the spatio-temporal variabilities of the EASM system and the EAWM system, and especially the multiple modes of the EAM system and their spatio-temporal variabilities. Some new results have also been achieved in understanding the atmosphere-ocean interaction and atmosphere-land interaction processes that affect the variability of the EAM system. Based on recent studies, the EAM system can be seen as more than a circulation system, it can be viewed as an atmosphere-ocean-land coupled system, namely, the EAM climate system. In addition, further progress has been made in diagnosing the internal physical mechanisms of EAM climate system variability, especially regarding the characteristics and properties of the East Asia-Pacific (EAP) teleconnection over East Asia and the North Pacific, the "Silk Road" teleconnection along the westerly jet stream in the upper troposphere over the Asian continent, and the dynamical effects of quasi-stationary planetary wave activity on EAM system variability. At the end of the paper, some scientific problems regarding understanding the EAM system variability are proposed for further study.

  18. Impaired Spatio-Temporal Predictive Motor Timing Associated with Spinocerebellar Ataxia Type 6.

    Science.gov (United States)

    Broersen, Robin; Onuki, Yoshiyuki; Abdelgabar, Abdel R; Owens, Cullen B; Picard, Samuel; Willems, Jessica; Boele, Henk-Jan; Gazzola, Valeria; Van der Werf, Ysbrand D; De Zeeuw, Chris I

    2016-01-01

    Many daily life activities demand precise integration of spatial and temporal information of sensory inputs followed by appropriate motor actions. This type of integration is carried out in part by the cerebellum, which has been postulated to play a central role in learning and timing of movements. Cerebellar damage due to atrophy or lesions may compromise forward-model processing, in which both spatial and temporal cues are used to achieve prediction for future motor states. In the present study we sought to further investigate the cerebellar contribution to predictive and reactive motor timing, as well as to learning of sequential order and temporal intervals in these tasks. We tested patients with spinocerebellar ataxia type 6 (SCA6) and healthy controls for two related motor tasks; one requiring spatio-temporal prediction of dynamic visual stimuli and another one requiring reactive timing only. We found that healthy controls established spatio-temporal prediction in their responses with high temporal precision, which was absent in the cerebellar patients. SCA6 patients showed lower predictive motor timing, coinciding with a reduced number of correct responses during the 'anticipatory' period on the task. Moreover, on the task utilizing reactive motor timing functions, control participants showed both sequence order and temporal interval learning, whereas patients only showed sequence order learning. These results suggest that SCA6 affects predictive motor timing and temporal interval learning. Our results support and highlight cerebellar contribution to timing and argue for cerebellar engagement during spatio-temporal prediction of upcoming events. PMID:27571363

  19. Spatio-Temporal Trends and Identification of Correlated Variables with Water Quality for Drinking-Water Reservoirs

    OpenAIRE

    Qing Gu; Ke Wang; Jiadan Li; Ligang Ma; Jinsong Deng; Kefeng Zheng; Xiaobin Zhang; Li Sheng

    2015-01-01

    It is widely accepted that characterizing the spatio-temporal trends of water quality parameters and identifying correlated variables with water quality are indispensable for the management and protection of water resources. In this study, cluster analysis was used to classify 56 typical drinking water reservoirs in Zhejiang Province into three groups representing different water quality levels, using data of four water quality parameters for the period 2006–2010. Then, the spatio-temporal tr...

  20. Experimental devices for the spatio-temporal characterization of femtosecond high-power laser chains

    International Nuclear Information System (INIS)

    One of the advantages of high-power femtosecond lasers (TW-PW) is to obtain, at the focus of a focusing optic, very high intensities up to 1022 W.cm-2 (i.e. an electric field of 2.7 PV.m-1. Therefore, these lasers chains necessarily deliver beams with large diameter (up to 40 cm) and very short pulses (of the order of tens of femto-seconds). As a consequence, the spatial and temporal properties of the pulse are generally not independent. Such dependence, called spatial-temporal coupling has the effect of increasing the pulse duration and the size of the focal spot, which can lead to a significant reduction of the maximum intensity at the focus. Metrology devices commonly used on these high-power femtosecond lasers allow retrieving the spatial and temporal profiles of the pulse only in an independent manner. The aim of this thesis was to develop techniques for measuring spatio-temporal couplings in order to quantify their effect and correct them in order to obtain the maximum intensity at focus. First of all, we adapted an existing technique of spatio-temporal characterization to the measurement of TW lasers. To avoid the issues induced at the focus, such as those related to jittering, measurements were performed on the collimated beam. By adding a reference source to the original device, we managed to take into account the measurement artifacts due to thermal and mechanical variations affecting the interferometer. With this improvement, it was possible to reconstruct the complete spatio-temporal profile of the beam, particularly its wavefront. However, the limitations imposed by this technique led to the development of a new measurement device. Based on a cross-correlation, this technique consists of making the laser beam to interfere with a part of itself, small enough not to be spatio-temporally distorted. We have also implemented a variant of this device for a single-shot measurement along one transverse dimension of the pulse. Using these techniques, we

  1. Chua's circuit and its characterization as a filter

    International Nuclear Information System (INIS)

    This article deals with Chua's circuit characterization from the point of view of a filter based on the concept of piecewise linear functions. Furthermore, experiments are developed for teaching electronic systems that can be used for novel filtering concepts. The frequency range in which they are tested is from 20 Hz to 20 kHz, due to the audio spectrum comprised in this frequency range. The node associated with the capacitor and Chua's diode is used as input, and the node for another capacitor and the coil is used as output, thereby establishing one input–output relationship for each system case given by the piecewise linear functions. The experimental result shows that Chua's circuit behaves as a bandpass filter-amplifier, with a maximum frequency around 3 kHz and bandwidth between 1.5 kHz and 5.5 kHz. The results presented in this paper can motivate engineering students to pursue applications of novel electrical circuits based on topics that are of potential interest in their future research studies. (paper)

  2. Interactions between Inhibitory Interneurons and Excitatory Associational Circuitry in Determining Spatio-Temporal Dynamics of Hippocampal Dentate Granule Cells: A Large-Scale Computational Study

    Directory of Open Access Journals (Sweden)

    Phillip eHendrickson

    2015-11-01

    Full Text Available This paper reports on findings from a million-cell granule cell model of the rat dentate gyrus that was used to explore the contributions of local interneuronal and associational circuits to network-level activity. The model contains experimentally derived morphological parameters for granule cells, which each contain approximately 200 compartments, and biophysical parameters for granule cells, basket cells and mossy cells that were based both on electrophysiological data and previously published models. Synaptic input to cells in the model consisted of glutamatergic AMPA-like EPSPs and GABAergic-like IPSPs from excitatory and inhibitory neurons, respectively. The main source of input to the model was from layer II entorhinal cortical neurons. Network connectivity was constrained by the topography of the system, and was derived from axonal transport studies, which provided details about the spatial spread of axonal terminal fields, as well as how subregions of the medial and lateral entorhinal cortices project to subregions of the dentate gyrus. Results of this study show that strong feedback inhibition from the basket cell population can cause high-frequency rhythmicity in granule cells, while the strength of feedforward inhibition serves to scale the total amount of granule cell activity. Results furthermore show that the topography of local interneuronal circuits can have just as strong an impact on the development of spatio-temporal clusters in the granule cell population as the perforant path topography does, both sharpening existing clusters and introducing new ones with a greater spatial extent. Finally, results show that the interactions between the inhibitory and associational loops can cause high frequency oscillations that are modulated by a low-frequency oscillatory signal. These results serve to further illustrate the importance of topographical constraints on a global signal processing feature of a neural network, while also

  3. Spatio-temporal patterns of dengue in Malaysia: combining address and sub-district level

    Directory of Open Access Journals (Sweden)

    Cheong Y. Ling

    2014-11-01

    Full Text Available Spatio-temporal patterns of dengue risk in Malaysia were studied both at the address and the sub-district level in the province of Selangor and the Federal Territory of Kuala Lumpur. We geocoded laboratory-confirmed dengue cases from the years 2008 to 2010 at the address level and further aggregated the cases in proportion to the population at risk at the sub-district level. Kulldorff’s spatial scan statistic was applied for the investigation that identified changing spatial patterns of dengue cases at both levels. At the address level, spatio-temporal clusters of dengue cases were concentrated at the central and south-eastern part of the study area in the early part of the years studied. Analyses at the sub-district level revealed a consistent spatial clustering of a high number of cases proportional to the population at risk. Linking both levels assisted in the identification of differences and confirmed the presence of areas at high risk for dengue infection. Our results suggest that the observed dengue cases had both a spatial and a temporal epidemiological component, which needs to be acknowl- edged and addressed to develop efficient control measures, including spatially explicit vector control. Our findings highlight the importance of detailed geographical analysis of disease cases in heterogeneous environments with a focus on clustered populations at different spatial and temporal scales. We conclude that bringing together information on the spatio-temporal distribution of dengue cases with a deeper insight of linkages between dengue risk, climate factors and land use constitutes an important step towards the development of an effective risk management strategy.

  4. McMaster Mesonet soil moisture dataset: description and spatio-temporal variability analysis

    Directory of Open Access Journals (Sweden)

    K. C. Kornelsen

    2012-12-01

    Full Text Available This paper introduces and describes the hourly high resolution soil moisture dataset continuously recorded by the McMaster Mesonet located in the Hamilton-Halton Watershed in Southern Ontario, Canada. The McMaster Mesonet consists of a network of time domain reflectometer (TDR probes collecting hourly soil moisture data at six depths between 10 cm and 100 cm at nine locations per site spread across four sites in the 1250 km2 watershed. The sites for the soil moisture arrays are designed to further improve understanding of soil moisture dynamics in a cold and snowy climate and to capture soil moisture transitions in areas that have different topography, soil and land-cover. The McMaster Mesonet soil moisture constitutes a unique database in Canada because of its high spatio-temporal resolution. In order to provide some insight into the dominant processes at the McMaster Mesonet sites a spatio-temporal and temporal stability analysis were conducted to identify spatio-temporal patterns in the data and to suggest some physical interpretation of soil moisture variability. It was found that the seasonal Canadian climate causes a transition in soil moisture patterns at seasonal time scales. During winter and early spring months, and at the meadow sites, soil moisture distribution is governed by topographic redistribution, whereas following efflorescence in the spring and summer, soil moisture spatial distribution at the forested site was equally dominated by vegetation canopy. Analysis of short-term temporal stability revealed that the relative difference between sites was maintained unless there was significant rainfall (> 20 mm or wet conditions a priori. Following a disturbance in the spatial soil moisture distribution due to wetting, the relative soil moisture pattern re-emerged in 18 to 24 h. Access to the McMaster Mesonet data can be provided by visiting http://www.hydrology.mcmaster.ca.

  5. Spatial clustering in the spatio-temporal dynamics of endemic cholera

    Directory of Open Access Journals (Sweden)

    Emch Michael

    2010-03-01

    Full Text Available Abstract Background The spatio-temporal patterns of infectious diseases that are environmentally driven reflect the combined effects of transmission dynamics and environmental heterogeneity. They contain important information on different routes of transmission, including the role of environmental reservoirs. Consideration of the spatial component in infectious disease dynamics has led to insights on the propagation of fronts at the level of counties in rabies in the US, and the metapopulation behavior at the level of cities in childhood diseases such as measles in the UK, both at relatively coarse scales. As epidemiological data on individual infections become available, spatio-temporal patterns can be examined at higher resolutions. Methods The extensive spatio-temporal data set for cholera in Matlab, Bangladesh, maps the individual location of cases from 1983 to 2003. This unique record allows us to examine the spatial structure of cholera outbreaks, to address the role of primary transmission, occurring from an aquatic reservoir to the human host, and that of secondary transmission, involving a feedback between current and past levels of infection. We use Ripley's K and L indices and bootstrapping methods to evaluate the occurrence of spatial clustering in the cases during outbreaks using different temporal windows. The spatial location of cases was also confronted against the spatial location of water sources. Results Spatial clustering of cholera cases was detected at different temporal and spatial scales. Cases relative to water sources also exhibit spatial clustering. Conclusions The clustering of cases supports an important role of secondary transmission in the dynamics of cholera epidemics in Matlab, Bangladesh. The spatial clustering of cases relative to water sources, and its timing, suggests an effective role of water reservoirs during the onset of cholera outbreaks. Once primary transmission has initiated an outbreak, secondary

  6. McMaster Mesonet soil moisture dataset: description and spatio-temporal variability analysis

    Directory of Open Access Journals (Sweden)

    K. C. Kornelsen

    2013-04-01

    Full Text Available This paper introduces and describes the hourly, high-resolution soil moisture dataset continuously recorded by the McMaster Mesonet located in the Hamilton-Halton Watershed in Southern Ontario, Canada. The McMaster Mesonet consists of a network of time domain reflectometer (TDR probes collecting hourly soil moisture data at six depths between 10 cm and 100 cm at nine locations per site, spread across four sites in the 1250 km2 watershed. The sites for the soil moisture arrays are designed to further improve understanding of soil moisture dynamics in a seasonal climate and to capture soil moisture transitions in areas that have different topography, soil and land cover. The McMaster Mesonet soil moisture constitutes a unique database in Canada because of its high spatio-temporal resolution. In order to provide some insight into the dominant processes at the McMaster Mesonet sites, a spatio-temporal and temporal stability analysis were conducted to identify spatio-temporal patterns in the data and to suggest some physical interpretation of soil moisture variability. It was found that the seasonal climate of the Great Lakes Basin causes a transition in soil moisture patterns at seasonal timescales. During winter and early spring months, and at the meadow sites, soil moisture distribution is governed by topographic redistribution, whereas following efflorescence in the spring and summer, soil moisture spatial distribution at the forested site was also controlled by vegetation canopy. Analysis of short-term temporal stability revealed that the relative difference between sites was maintained unless there was significant rainfall (> 20 mm or wet conditions a priori. Following a disturbance in the spatial soil moisture distribution due to wetting, the relative soil moisture pattern re-emerged in 18 to 24 h. Access to the McMaster Mesonet data can be provided by visiting www.hydrology.mcmaster.ca/mesonet.

  7. Bayesian spatio-temporal modelling of tobacco-related cancer mortality in Switzerland

    Directory of Open Access Journals (Sweden)

    Verena Jürgens

    2013-05-01

    Full Text Available Tobacco smoking is a main cause of disease in Switzerland; lung cancer being the most common cancer mortality in men and the second most common in women. Although disease-specific mortality is decreasing in men, it is steadily increasing in women. The four language regions in this country might play a role in this context as they are influenced in different ways by the cultural and social behaviour of neighbouring countries. Bayesian hierarchical spatio-temporal, negative binomial models were fitted on subgroup-specific death rates indirectly standardized by national references to explore age- and gender-specific spatio-temporal patterns of mortality due to lung cancer and other tobacco-related cancers in Switzerland for the time period 1969-2002. Differences influenced by linguistic region and life in rural or urban areas were also accounted for. Male lung cancer mortality was found to be rather homogeneous in space, whereas women were confirmed to be more affected in urban regions. Compared to the German-speaking part, female mortality was higher in the French-speaking part of the country, a result contradicting other reports of similar comparisons between France and Germany. The spatio-temporal patterns of mortality were similar for lung cancer and other tobacco-related cancers. The estimated mortality maps can support the planning in health care services and evaluation of a national tobacco control programme. Better understanding of spatial and temporal variation of cancer of the lung and other tobacco-related cancers may help in allocating resources for more effective screening, diagnosis and therapy. The methodology can be applied to similar studies in other settings.

  8. Spatio-temporal availability of soft mast in clearcuts in the Southern Appalachians

    Science.gov (United States)

    Reynolds-Hogland, M. J.; Mitchell, M.S.; Powell, R.A.

    2006-01-01

    Soft mast is an important resource for many wild populations in the Southern Appalachians, yet the way clear-cutting affects availability of soft mast though time is not fully understood. We tested a theoretical model of temporal availability of soft mast in clearcuts using empirical data on percent cover and berry production of Gaylussacia, Vaccinium, and Rubus spp. plants in 100 stands that were clearcut (0-122 years old) in the Southern Appalachian Mountains. We modeled the relationship between soft mast availability and stand age, evaluated the effects of topography and forest type on soft mast, developed statistical models for predicting the spatio-temporal distribution of soft mast, and tested the hypothesis that percent cover of berry plants and berry production provided similar information about soft mast availability. We found temporal dynamics explained berry production better than it predicted percent plant cover, whereas topographic variables influenced percent plant cover more than they influenced berry production. Berry production and percent plant cover were highest in ???2-9-year-old stands. Percent plant cover was lowest in 10-69-year-old stands and intermediate in 70+-year-old stands. Three of our spatio-temporal models performed well during model testing and they were not biased by the training data, indicating the inferences about spatio-temporal availability of soft mast extended beyond our sample data. The methods we used to estimate the distribution of soft mast may be useful for modeling distributions of other resources. ?? 2006 Elsevier B.V. All rights reserved.

  9. Indexing, Query Processing, and Clustering of Spatio-Temporal Text Objects

    DEFF Research Database (Denmark)

    Skovsgaard, Anders

    ) spatio-temporal aggregates, and (iii) spatio-textual region querying without special purpose index structures. First, two novel techniques to perform grouping of spatio-textual objects are presented. In the first technique, top-k groups of objects are returned while taking into account aspects......, the grouping of spatio-textual objects is done without considering query locations, and a clustering approach is proposed that takes into account both the spatial and textual attributes of the objects. The technique expands clusters based on a proposed quality function that enables clusters of arbitrary shape...

  10. Synchronization and information transmission in spatio-temporal networks of deformable units

    Indian Academy of Sciences (India)

    F M Moukam Kakmeni; M S Baptista

    2008-06-01

    We study the relationship between synchronization and the rate with which information is exchanged between nodes in a spatio-temporal network that describes the dynamics of classical particles under a substrate Remoissenet-Peyrard potential. We also show how phase and complete synchronization can be detected in this network. The difficulty in detecting phase synchronization in such a network appears due to the highly non-coherent character of the particle dynamics which unables a proper definition of the phase dynamics. The di±culty in detecting complete synchronization appears due to the spatio character of the potential which results in an asymptotic state highly dependent on the initial state.

  11. Spatio-temporal analysis of human electroencephalograms: Petit-mal epilepsy

    Science.gov (United States)

    Friedrich, R.; Uhl, C.

    An analysis of multigrid electroencephalograms (EEG) derived from two different persons suffering from petit-mal epilepsy is performed. Using a previously devised method for analyzing spatio-temporal patterns (Uhl, et al., Z. Phys. B 92 (1993) 211-219), we find a suitable mode decomposition of the EEG. Additionally, we are able to extract a three-dimensional dynamical system which describes the dynamics of the patterns as a kind of mode interaction. We show that the spike-wave behavior characteristic for petit-mal epilepsy arising in the dynamical system is related with Sil'nikov-type behavior of the mode dynamics.

  12. Spatio-temporal patterns with hyperchaotic dynamics in diffusively coupled biochemical oscillators

    Directory of Open Access Journals (Sweden)

    Gerold Baier

    1997-01-01

    Full Text Available We present three examples how complex spatio-temporal patterns can be linked to hyperchaotic attractors in dynamical systems consisting of nonlinear biochemical oscillators coupled linearly with diffusion terms. The systems involved are: (a a two-variable oscillator with two consecutive autocatalytic reactions derived from the Lotka–Volterra scheme; (b a minimal two-variable oscillator with one first-order autocatalytic reaction; (c a three-variable oscillator with first-order feedback lacking autocatalysis. The dynamics of a finite number of coupled biochemical oscillators may account for complex patterns in compartmentalized living systems like cells or tissue, and may be tested experimentally in coupled microreactors.

  13. Moving Object Trajectories Meta-Model and Spatio-Temporal Queries

    Directory of Open Access Journals (Sweden)

    Azedine Boulmakoul

    2012-05-01

    Full Text Available In this paper, a general moving object trajectories framework is put forward to allow independent applications processing trajectories data benefit from a high level of interoperability, information sharing as well as an efficient answer for a wide range of complex trajectory queries. Our proposed meta-model is based on ontology and event approach, incorporates existing presentations of trajectory and integrates new patterns like space–time path to describe activities in geographical space-time. We introduce recursive Region of Interest concepts and deal mobile objects trajectories with diverse spatio-temporal samplingprotocols and different sensors available that traditional data model alone are incapable for this purpose.

  14. Spatio-temporal patterns of dengue in Malaysia: combining address and sub-district level

    OpenAIRE

    Cheong Y. Ling; Oliver Gruebner; Alexander Krämer; Tobia Lakes

    2014-01-01

    Spatio-temporal patterns of dengue risk in Malaysia were studied both at the address and the sub-district level in the province of Selangor and the Federal Territory of Kuala Lumpur. We geocoded laboratory-confirmed dengue cases from the years 2008 to 2010 at the address level and further aggregated the cases in proportion to the population at risk at the sub-district level. Kulldorff’s spatial scan statistic was applied for the investigation that identified changing spatial patterns of dengu...

  15. Skill-Based Differences in Spatio-Temporal Team Behavior in Defence of The Ancients 2

    OpenAIRE

    Drachen, Anders; Yancey, Matthew; Maguire, John; Chu, Derrek; Wang, Iris Yuhui; Mahlmann, Tobias; Schubert, Matthias; Klabjan, Diego

    2016-01-01

    Multiplayer Online Battle Arena (MOBA) games are among the most played digital games in the world. In these games, teams of players fight against each other in arena environments, and the gameplay is focused on tactical combat. Mastering MOBAs requires extensive practice, as is exemplified in the popular MOBA Defence of the Ancients 2 (DotA 2). In this paper, we present three data-driven measures of spatio-temporal behavior in DotA 2: 1) Zone changes; 2) Distribution of team members and: 3) T...

  16. Spatio-temporal Dynamics of Pond Use and Recruitment in Florida Gopher Frogs (Rana Capito aesopus)

    Energy Technology Data Exchange (ETDEWEB)

    Greenberg, C.H.

    2000-05-16

    We examined spatio-temporal dynamics of the Florida Gopher frog breeding and juvenile recruitment. Ponds were situated in a hardwood or pine-savanna matrix of upland forest. Movement was monitored from 1994-1999. Adult pond use was low but relatively constant. Juvenile recruitment was higher in the upland savanna matrix. Body size was negatively correlated with the number of juveniles exiting the pond in only one year suggesting intraspecific competition is one of many factors. Most immigration occurred in May through August and was unrelated to rainfall.

  17. Spatio-Temporal Variation and Prediction of Ischemic Heart Disease Hospitalizations in Shenzhen, China

    Directory of Open Access Journals (Sweden)

    Yanxia Wang

    2014-05-01

    Full Text Available Ischemic heart disease (IHD is a leading cause of death worldwide. Urban public health and medical management in Shenzhen, an international city in the developing country of China, is challenged by an increasing burden of IHD. This study analyzed the spatio-temporal variation of IHD hospital admissions from 2003 to 2012 utilizing spatial statistics, spatial analysis, and space-time scan statistics. The spatial statistics and spatial analysis measured the incidence rate (hospital admissions per 1,000 residents and the standardized rate (the observed cases standardized by the expected cases of IHD at the district level to determine the spatio-temporal distribution and identify patterns of change. The space-time scan statistics was used to identify spatio-temporal clusters of IHD hospital admissions at the district level. The other objective of this study was to forecast the IHD hospital admissions over the next three years (2013–2015 to predict the IHD incidence rates and the varying burdens of IHD-related medical services among the districts in Shenzhen. The results show that the highest hospital admissions, incidence rates, and standardized rates of IHD are in Futian. From 2003 to 2012, the IHD hospital admissions exhibited similar mean centers and directional distributions, with a slight increase in admissions toward the north in accordance with the movement of the total population. The incidence rates of IHD exhibited a gradual increase from 2003 to 2012 for all districts in Shenzhen, which may be the result of the rapid development of the economy and the increasing traffic pollution. In addition, some neighboring areas exhibited similar temporal change patterns, which were also detected by the spatio-temporal cluster analysis. Futian and Dapeng would have the highest and the lowest hospital admissions, respectively, although these districts have the highest incidence rates among all of the districts from 2013 to 2015 based on the prediction

  18. Spatio-temporal extreme events in a laser with a saturable absorber

    CERN Document Server

    Rimoldi, Cristina; Prati, Franco; Tissoni, Giovanna

    2016-01-01

    We study extreme events occurring in the transverse $(x,y)$ section of the field emitted by a broad-area semiconductor laser with a saturable absorber. The spatio-temporal events on which we perform the statistical analysis are identified as maxima of the field intensity in the 3D space $(x,y,t)$. We identify regions in the parameter space where extreme events are more likely to occur and we study the connection of those extreme events with the cavity solitons that are known to exist in the same system, both stationary and self-pulsing.

  19. All Optical Three Dimensional Spatio-Temporal Correlator for Automatic Event Recognition Using Multiphoton Atomic System

    CERN Document Server

    Monjur, Mehjabin S; Shahriar, Selim M

    2015-01-01

    In this paper, we model and show the simulation results of a three-dimensional spatio-temporal correlator (STC) that combines the technique of holographic correlation and photon echo based temporal pattern recognition. The STC is shift invariant in space and time. It can be used to recognize rapidly an event (e.g., a short video clip) that may be present in a large video file, and determine the temporal location of the event. It can also determine multiple matches automatically if the event occurs more than once. We show how to realize the STC using Raman transitions in Rb atomic vapor.

  20. Moving Object Trajectories Meta-Model And Spatio-Temporal Queries

    CERN Document Server

    Boulmakoul, Azedine; Lbath, Ahmed

    2012-01-01

    In this paper, a general moving object trajectories framework is put forward to allow independent applications processing trajectories data benefit from a high level of interoperability, information sharing as well as an efficient answer for a wide range of complex trajectory queries. Our proposed meta-model is based on ontology and event approach, incorporates existing presentations of trajectory and integrates new patterns like space-time path to describe activities in geographical space-time. We introduce recursive Region of Interest concepts and deal mobile objects trajectories with diverse spatio-temporal sampling protocols and different sensors available that traditional data model alone are incapable for this purpose.

  1. Dissecting spatio-temporal protein networks driving human heart development and related disorders

    DEFF Research Database (Denmark)

    Hansen, Kasper Lage; Mølgård, Kjeld; Greenway, Steven;

    2010-01-01

    of a developing organ identifying several novel signaling modules. Our results show that organ development relies on surprisingly few, extensively recycled, protein modules that integrate into complex higher-order networks. This design allows the formation of a complicated organ using simple building blocks...... development, we combined detailed phenotype information from deleterious mutations in 255 genes with high-confidence experimental interactome data, and coupled the results to thorough experimental validation. Hereby, we made the first systematic analysis of spatio-temporal protein networks driving many stages...

  2. Spatio-temporal description of the cavitating flow behavior around NACA 2412 hydrofoil

    Science.gov (United States)

    Rudolf, P.; Štefan, D.; Sedlář, M.; Kozák, J.; Habán, V.; Huzlík, R.

    2015-12-01

    Spatio-temporal description of the cavitating flow around hydrofoil with 8 degrees incidence using proper orthogonal decomposition (POD) is presented. POD is a suitable tool, which provides information not only about the flow dynamics, but also about relevance of different flow structures. POD also enables to track energy transport within the domain and energy transfer among the eigenmodes of the flow field. Analysis documents change of the flow structure for decreasing cavitation number, which can be most likely attributed to sheet/cloud cavitation transition.

  3. GeT_Move: An Efficient and Unifying Spatio-Temporal Pattern Mining Algorithm for Moving Objects

    CERN Document Server

    Hai, Phan Nhat; Teisseire, Maguelonne

    2012-01-01

    Recent improvements in positioning technology has led to a much wider availability of massive moving object data. A crucial task is to find the moving objects that travel together. Usually, these object sets are called spatio-temporal patterns. Due to the emergence of many different kinds of spatio-temporal patterns in recent years, different approaches have been proposed to extract them. However, each approach only focuses on mining a specific kind of pattern. In addition to being a painstaking task due to the large number of algorithms used to mine and manage patterns, it is also time consuming. Moreover, we have to execute these algorithms again whenever new data are added to the existing database. To address these issues, we ?first redefine spatio-temporal patterns in the itemset context. Secondly, we propose a unifying approach, named GeT_Move, which uses a frequent closed itemset-based spatio-temporal pattern-mining algorithm to mine and manage different spatio-temporal patterns. GeT_Move is implemented...

  4. EEG source imaging with spatio-temporal tomographic nonnegative independent component analysis.

    Science.gov (United States)

    Valdés-Sosa, Pedro A; Vega-Hernández, Mayrim; Sánchez-Bornot, José Miguel; Martínez-Montes, Eduardo; Bobes, María Antonieta

    2009-06-01

    This article describes a spatio-temporal EEG/MEG source imaging (ESI) that extracts a parsimonious set of "atoms" or components, each the outer product of both a spatial and a temporal signature. The sources estimated are localized as smooth, minimally overlapping patches of cortical activation that are obtained by constraining spatial signatures to be nonnegative (NN), orthogonal, sparse, and smooth-in effect integrating ESI with NN-ICA. This constitutes a generalization of work by this group on the use of multiple penalties for ESI. A multiplicative update algorithm is derived being stable, fast and converging within seconds near the optimal solution. This procedure, spatio-temporal tomographic NN ICA (STTONNICA), is equally able to recover superficial or deep sources without additional weighting constraints as tested with simulations. STTONNICA analysis of ERPs to familiar and unfamiliar faces yields an occipital-fusiform atom activated by all faces and a more frontal atom that only is active with familiar faces. The temporal signatures are at present unconstrained but can be required to be smooth, complex, or following a multivariate autoregressive model.

  5. Statistical study of spatio-temporal distribution of precursor solar flares associated with major flares

    Science.gov (United States)

    Gyenge, N.; Ballai, I.; Baranyi, T.

    2016-07-01

    The aim of the present investigation is to study the spatio-temporal distribution of precursor flares during the 24 h interval preceding M- and X-class major flares and the evolution of follower flares. Information on associated (precursor and follower) flares is provided by Reuven Ramaty High Energy Solar Spectroscopic Imager (RHESSI). Flare list, while the major flares are observed by the Geostationary Operational Environmental Satellite (GOES) system satellites between 2002 and 2014. There are distinct evolutionary differences between the spatio-temporal distributions of associated flares in about one-day period depending on the type of the main flare. The spatial distribution was characterized by the normalized frequency distribution of the quantity δ (the distance between the major flare and its precursor flare normalized by the sunspot group diameter) in four 6 h time intervals before the major event. The precursors of X-class flares have a double-peaked spatial distribution for more than half a day prior to the major flare, but it changes to a lognormal-like distribution roughly 6 h prior to the event. The precursors of M-class flares show lognormal-like distribution in each 6 h subinterval. The most frequent sites of the precursors in the active region are within a distance of about 0.1 diameter of sunspot group from the site of the major flare in each case. Our investigation shows that the build-up of energy is more effective than the release of energy because of precursors.

  6. Gas monitoring data anomaly identification based on spatio-temporal correlativity analysis

    Institute of Scientific and Technical Information of China (English)

    Shi-song ZHU; Yun-jia WANG; Lian-jiang WEI

    2013-01-01

    Based on spatio-temporal correlativity analysis method,the automatic identification techniques for data anomaly monitoring of coal mining working face gas are presented.The asynchronous correlative characteristics of gas migration in working face airflow direction are qualitatively analyzed.The calculation method of asynchronous correlation delay step and the prediction and inversion formulas of gas concentration changing with time and space after gas emission in the air return roadway are provided.By calculating one hundred and fifty groups of gas sensors data series from a coal mine which have the theoretical correlativity,the correlative coefficient values range of eight kinds of data anomaly is obtained.Then the gas monitoring data anomaly identification algorithm based on spatio-temporal correlativity analysis is accordingly presented.In order to improve the efficiency of analysis,the gas sensors code rules which can express the spatial topological relations are suggested.The experiments indicate that methods presented in this article can effectively compensate the defects of methods based on a single gas sensor monitoring data.

  7. Spatio-temporal patterns of Cu contamination in mosses using geostatistical estimation

    International Nuclear Information System (INIS)

    Several recent studies have reported temporal trends in metal contamination in mosses, but such assessments did not evaluate uncertainty in temporal changes, therefore providing weak statistical support for time comparisons. Furthermore, levels of contaminants in the environment change in both space and time, requiring space-time modelling methods for map estimation. We propose an indicator of spatial and temporal variation based on space-time estimation by indicator kriging, where uncertainty at each location is estimated from the local distribution function, thereby calculating variability intervals for comparison between several biomonitoring dates. This approach was exemplified using copper concentrations in mosses from four Portuguese surveys (1992, 1997, 2002 and 2006). Using this approach, we identified a general decrease in copper contamination, but spatial patterns were not uniform, and from the uncertainty intervals, changes could not be considered significant in the majority of the study area. - Highlights: ► We estimated copper contamination in mosses by spatio-temporal kriging between 1992 and 2006. ► We determined local distribution functions to define variation intervals at each location. ► Significance of temporal changes is assessed using an indicator based on uncertainty interval. ► There is general decrease in copper contamination, but spatial patterns are not uniform. - The contamination of copper in mosses was estimated by spatio-temporal kriging, with determination of uncertainty classes in the temporal variation.

  8. Estimating spatio-temporal dynamics of stream total phosphate concentration by soft computing techniques.

    Science.gov (United States)

    Chang, Fi-John; Chen, Pin-An; Chang, Li-Chiu; Tsai, Yu-Hsuan

    2016-08-15

    This study attempts to model the spatio-temporal dynamics of total phosphate (TP) concentrations along a river for effective hydro-environmental management. We propose a systematical modeling scheme (SMS), which is an ingenious modeling process equipped with a dynamic neural network and three refined statistical methods, for reliably predicting the TP concentrations along a river simultaneously. Two different types of artificial neural network (BPNN-static neural network; NARX network-dynamic neural network) are constructed in modeling the dynamic system. The Dahan River in Taiwan is used as a study case, where ten-year seasonal water quality data collected at seven monitoring stations along the river are used for model training and validation. Results demonstrate that the NARX network can suitably capture the important dynamic features and remarkably outperforms the BPNN model, and the SMS can effectively identify key input factors, suitably overcome data scarcity, significantly increase model reliability, satisfactorily estimate site-specific TP concentration at seven monitoring stations simultaneously, and adequately reconstruct seasonal TP data into a monthly scale. The proposed SMS can reliably model the dynamic spatio-temporal water pollution variation in a river system for missing, hazardous or costly data of interest. PMID:27100003

  9. A geomatic methodology for spatio-temporal analysis of climatologic variables and water related diseases

    Science.gov (United States)

    Quentin, E.; Gómez Albores, M. A.; Díaz Delgado, C.

    2009-04-01

    The main objective of this research is to propose, by the way of geomatic developments, an integrated tool to analyze and model the spatio-temporal pattern of human diseases related to environmental conditions, in particular the ones that are linked to water resources. The geomatic developments follows four generic steps : requirement analysis, conceptual modeling, geomatic modeling and implementation (in Idrisi GIS software). A first development consists of the preprocessing of water, population and health data in order to facilitate the conversion and validation of tabular data into the required structure for spatio-temporal analysis. Three parallel developments follow : water balance, demographic state and evolution, epidemiological measures (morbidity and mortality rates, diseases burden). The new geomatic modules in their actual state have been tested on various regions of Mexico Republic (Lerma watershed, Chiapas state) focusing on diarrhea and vector borne diseases (dengue and malaria) and considering records over the last decade : a yearly as well as seasonal spreading trend can be observed in correlation with precipitation and temperature data. In an ecohealth perspective, the geomatic approach results particularly appropriate since one of its purposes is the integration of the various spatial themes implied in the study problem, environmental as anthropogenic. By the use of powerful spatial analysis functions, it permits the detection of spatial trends which, combined to the temporal evolution, can be of particularly use for example in climate change context, if sufficiently valid historical data can be obtain.

  10. Spatio-temporal dynamics of fructan metabolism in developing barley grains.

    Science.gov (United States)

    Peukert, Manuela; Thiel, Johannes; Peshev, Darin; Weschke, Winfriede; Van den Ende, Wim; Mock, Hans-Peter; Matros, Andrea

    2014-09-01

    Barley (Hordeum vulgare) grain development follows a series of defined morphological and physiological stages and depends on the supply of assimilates (mainly sucrose) from the mother plant. Here, spatio-temporal patterns of sugar distributions were investigated by mass spectrometric imaging, targeted metabolite analyses, and transcript profiling of microdissected grain tissues. Distinct spatio-temporal sugar balances were observed, which may relate to differentiation and grain filling processes. Notably, various types of oligofructans showed specific distribution patterns. Levan- and graminan-type oligofructans were synthesized in the cellularized endosperm prior to the commencement of starch biosynthesis, while during the storage phase, inulin-type oligofructans accumulated to a high concentration in and around the nascent endosperm cavity. In the shrunken endosperm mutant seg8, with a decreased sucrose flux toward the endosperm, fructan accumulation was impaired. The tight partitioning of oligofructan biosynthesis hints at distinct functions of the various fructan types in the young endosperm prior to starch accumulation and in the endosperm transfer cells that accomplish the assimilate supply toward the endosperm at the storage phase. PMID:25271242

  11. Evaluation of spatio-temporal variability in Land Surface Temperature: A case study of Zonguldak, Turkey.

    Science.gov (United States)

    Sekertekin, Aliihsan; Kutoglu, Senol Hakan; Kaya, Sinasi

    2016-01-01

    The aim of this study is to analyze spatio-temporal variability in Land Surface Temperature (LST) in and around the city of Zonguldak as a result of the growing urbanization and industrialization during the last decade. Three Landsat 5 data and one Landsat 8 data acquired on different dates were exploited in acquiring LST maps utilizing mono-window algorithm. The outcomes obtained from this study indicate that there exists a significant temperature rise in the region for the time period between 1986 and 2015. Some cross sections were selected in order to examine the relationship between the land use and LST changes in more detail. The mean LST difference between 1986 and 2015 in ERDEMIR iron and steel plant (6.8 °C), forestland (3 °C), city and town centers (4.2 °C), municipal rubbish tip (-3.9 °C), coal dump site (12.2 °C), and power plants' region (7 °C) were presented. In addition, the results indicated that the mean LST difference between forestland and city centers was approximately 5 °C, and the difference between forestland and industrial enterprises was almost 8 °C for all years. Spatio-temporal variability in LST in Zonguldak was examined in that study and due to the increase in LST, policy makers and urban planners should consider LST and urban heat island parameters for sustainable development. PMID:26666659

  12. Automatic Extraction of Spatio-Temporal Information from Arabic Text Documents

    Directory of Open Access Journals (Sweden)

    Abdelkoui Feriel

    2015-10-01

    Full Text Available Unstructured Arabic text documents are an important source of geographical and temporal information. The possibility of automatically tracking spatio-temporal information, capturing changes relating to events from text documents, is a new challenge in the fields of geographic information retrieval (GIR, temporal information retrieval (TIR and natural language processing (NLP. There was a lot of work on the extraction of information in other languages that use Latin alphabet, such as English,, French, or Spanish, by against the Arabic language is still not well supported in GIR and TIR and it needs to conduct more researches. In this paper, we present an approach that support automated exploration and extraction of spatio-temporal information from Arabic text documents in order to capture and model such information before it can be utilized in search and exploration tasks. The system has been successfully tested on 50 documents that include a mixture of types of Spatial/temporal information. The result achieved 91.01% of recall and of 80% precision. This illustrates that our approach is effective and its performance is satisfactory.

  13. Spatio-temporal evolution of biogeochemical processes at a landfill site

    Science.gov (United States)

    Arora, B.; Mohanty, B. P.; McGuire, J. T.

    2011-12-01

    Predictions of fate and transport of contaminants are strongly dependent on spatio-temporal variability of soil hydraulic and geochemical properties. This study focuses on time-series signatures of hydrological and geochemical properties at different locations within the Norman landfill site. Norman Landfill is a closed municipal landfill site with prevalent organic contamination. Monthly data at the site include specific conductance, δ18O, δ2H, dissolved organic carbon (DOC) and anions (chloride, sulfate, nitrate) from 1998-2006. Column scale data on chemical concentrations, redox gradients, and flow parameters are also available on daily and hydrological event (infiltration, drainage, etc.) scales. Since high-resolution datasets of contaminant concentrations are usually unavailable, Wavelet and Fourier analyses were used to infer the dominance of different biogeochemical processes at different spatio-temporal scales and to extract linkages between transport and reaction processes. Results indicate that time variability controls the progression of reactions affecting biodegradation of contaminants. Wavelet analysis suggests that iron-sulfide reduction reactions had high seasonal variability at the site, while fermentation processes dominated at the annual time scale. Findings also suggest the dominance of small spatial features such as layered interfaces and clay lenses in driving biogeochemical reactions at both column and landfill scales. A conceptual model that caters to increased understanding and remediating structurally heterogeneous variably-saturated media is developed from the study.

  14. Interesting Spatio-Temporal Region Discovery Computations Over Gpu and Mapreduce Platforms

    Science.gov (United States)

    McDermott, M.; Prasad, S. K.; Shekhar, S.; Zhou, X.

    2015-07-01

    Discovery of interesting paths and regions in spatio-temporal data sets is important to many fields such as the earth and atmospheric sciences, GIS, public safety and public health both as a goal and as a preliminary step in a larger series of computations. This discovery is usually an exhaustive procedure that quickly becomes extremely time consuming to perform using traditional paradigms and hardware and given the rapidly growing sizes of today's data sets is quickly outpacing the speed at which computational capacity is growing. In our previous work (Prasad et al., 2013a) we achieved a 50 times speedup over sequential using a single GPU. We were able to achieve near linear speedup over this result on interesting path discovery by using Apache Hadoop to distribute the workload across multiple GPU nodes. Leveraging the parallel architecture of GPUs we were able to drastically reduce the computation time of a 3-dimensional spatio-temporal interest region search on a single tile of normalized difference vegetative index for Saudi Arabia. We were further able to see an almost linear speedup in compute performance by distributing this workload across several GPUs with a simple MapReduce model. This increases the speed of processing 10 fold over the comparable sequential while simultaneously increasing the amount of data being processed by 384 fold. This allowed us to process the entirety of the selected data set instead of a constrained window.

  15. Spatio-temporal dynamics in the phenology of croplands across the Indo-Gangetic Plains

    Science.gov (United States)

    Duncan, John M. A.; Dash, Jadunandan; Atkinson, Peter M.

    2014-08-01

    Spatio-temporal dynamics in land surface phenology parameters observed over croplands can inform on crop-climate interactions and, elucidate local to regional scale vulnerabilities either due to climate change or prevailing sub-optimal agricultural practices. Here, we observe spatio-temporal trends in land surface phenology parameters (cropping intensity, length of growing season and productivity) for kharif and rabi cropping seasons from satellite data across the Indo-Gangetic Plains from 1982 to 2006. The productivity of the Indo-Gangetic Plains croplands is of regional importance and is a vital component of Indian national food security efforts. Aside from local and intra-state heterogeneity in observed trends there was a clear west-to-east gradient in cropping intensity. Key observed trends include increasing cropping intensity in the eastern IGP, increasing number of growing days per year in Bihar, Uttar Pradesh and Haryana and increasing productivity in both cropping seasons across the IGP. This information is a crucial input to integrated assessments of the croplands to ensure management of the agricultural system shifts towards a trajectory of climate-resilience and environmental sustainability. To create spatially explicit time-series, at a spatial resolution of 8 km across the IGP of the following LSP parameters: (i) cropping intensity, (ii) LGS and (iii) agro-ecosystem productivity. To quantify normal conditions, inter-annual variation and long-term trends in these LSP parameters at an 8 km spatial resolution across the IGP croplands.

  16. Spatio-temporal dynamics induced by competing instabilities in two asymmetrically coupled nonlinear evolution equations

    Energy Technology Data Exchange (ETDEWEB)

    Schüler, D.; Alonso, S.; Bär, M. [Physikalisch-Technische Bundesanstalt, Abbestrasse 2-12, 10587 Berlin (Germany); Torcini, A. [CNR-Consiglio Nazionale delle Ricerche, Istituto dei Sistemi Complessi - Via Madonna del Piano 10, I-50019 Sesto Fiorentino (Italy); INFN Sez. Firenze, via Sansone 1, I-50019 Sesto Fiorentino (Italy)

    2014-12-15

    Pattern formation often occurs in spatially extended physical, biological, and chemical systems due to an instability of the homogeneous steady state. The type of the instability usually prescribes the resulting spatio-temporal patterns and their characteristic length scales. However, patterns resulting from the simultaneous occurrence of instabilities cannot be expected to be simple superposition of the patterns associated with the considered instabilities. To address this issue, we design two simple models composed by two asymmetrically coupled equations of non-conserved (Swift-Hohenberg equations) or conserved (Cahn-Hilliard equations) order parameters with different characteristic wave lengths. The patterns arising in these systems range from coexisting static patterns of different wavelengths to traveling waves. A linear stability analysis allows to derive a two parameter phase diagram for the studied models, in particular, revealing for the Swift-Hohenberg equations, a co-dimension two bifurcation point of Turing and wave instability and a region of coexistence of stationary and traveling patterns. The nonlinear dynamics of the coupled evolution equations is investigated by performing accurate numerical simulations. These reveal more complex patterns, ranging from traveling waves with embedded Turing patterns domains to spatio-temporal chaos, and a wide hysteretic region, where waves or Turing patterns coexist. For the coupled Cahn-Hilliard equations the presence of a weak coupling is sufficient to arrest the coarsening process and to lead to the emergence of purely periodic patterns. The final states are characterized by domains with a characteristic length, which diverges logarithmically with the coupling amplitude.

  17. GeoMesa: a distributed architecture for spatio-temporal fusion

    Science.gov (United States)

    Hughes, James N.; Annex, Andrew; Eichelberger, Christopher N.; Fox, Anthony; Hulbert, Andrew; Ronquest, Michael

    2015-05-01

    Recent advances in distributed databases and computing have transformed the landscape of spatio-temporal machine learning. This paper presents GeoMesa, a distributed spatio-temporal database built on top of Hadoop and column-family databases such as Accumulo and HBase, that includes a suite of tools for indexing, managing and analyzing both vector and raster data. The indexing techniques use space filling curves to map multi-dimensional data to the single lexicographic list managed by the underlying distributed database. In contrast to traditional non-distributed RDBMS, GeoMesa is capable of scaling horizontally by adding more resources at runtime; the index rebalances across the additional resources. In the raster domain, GeoMesa leverages Accumulo's server-side iterators and aggregators to perform raster interpolation and associative map algebra operations in parallel at query time. The paper concludes with two geo-time data fusion examples: using GeoMesa to aggregate Twitter data by keywords; and georegistration to drape full-motion video (FMV) over terrain.

  18. Novel Approach to Estimate Missing Data Using Spatio-Temporal Estimation Method

    Directory of Open Access Journals (Sweden)

    Aniruddha D. Shelotkar

    2016-04-01

    Full Text Available With advancement of wireless technology and the processing power in mobile devices, every handheld device supports numerous video streaming applications. Generally, user datagram protocol (UDP is used in video transmission technology which does not provide assured quality of service (QoS. Therefore, there is need for video post processing modules for error concealments. In this paper we propose one such algorithm to recover multiple lost blocks of data in video. The proposed algorithm is based on a combination of wavelet transform and spatio-temporal data estimation. We decomposed the frame with lost blocks using wavelet transform in low and high frequency bands. Then the approximate information (low frequency of missing block is estimated using spatial smoothening and the details (high frequency are added using bidirectional (temporal predication of high frequency wavelet coefficients. Finally inverse wavelet transform is applied on modified wavelet coefficients to recover the frame. In proposed algorithm, we carry out an automatic estimation of missing block using spatio-temporal manner. Experiments are carried with different YUV and compressed domain streams. The experimental results show enhancement in PSNR as well as visual quality and cross verified by video quality metrics (VQM.

  19. Detecting spatio-temporal modes in multivariate data by entropy field decomposition

    Science.gov (United States)

    Frank, Lawrence R.; Galinsky, Vitaly L.

    2016-09-01

    A new data analysis method that addresses a general problem of detecting spatio-temporal variations in multivariate data is presented. The method utilizes two recent and complimentary general approaches to data analysis, information field theory (IFT) and entropy spectrum pathways (ESPs). Both methods reformulate and incorporate Bayesian theory, thus use prior information to uncover underlying structure of the unknown signal. Unification of ESP and IFT creates an approach that is non-Gaussian and nonlinear by construction and is found to produce unique spatio-temporal modes of signal behavior that can be ranked according to their significance, from which space-time trajectories of parameter variations can be constructed and quantified. Two brief examples of real world applications of the theory to the analysis of data bearing completely different, unrelated nature, lacking any underlying similarity, are also presented. The first example provides an analysis of resting state functional magnetic resonance imaging data that allowed us to create an efficient and accurate computational method for assessing and categorizing brain activity. The second example demonstrates the potential of the method in the application to the analysis of a strong atmospheric storm circulation system during the complicated stage of tornado development and formation using data recorded by a mobile Doppler radar. Reference implementation of the method will be made available as a part of the QUEST toolkit that is currently under development at the Center for Scientific Computation in Imaging.

  20. Spatio-temporal heterogeneity of riparian soil morphology in a restored floodplain

    Directory of Open Access Journals (Sweden)

    B. Fournier

    2013-04-01

    Full Text Available Floodplains have been intensively altered in industrialized countries, but are now increasingly being restored and it is therefore important to assess the effect of these restoration projects on the aquatic and terrestrial components of ecosystems. Soils are a functionally crucial component of terrestrial ecosystems but are generally overlooked in floodplain restoration assessment. We studied the spatio-temporal heterogeneity of soil morphology in a restored (riverbed widening river reach along River Thur (Switzerland using three criteria (soil diversity, dynamism and typicality and their associated indicators. We hypothesized that these criteria would correctly discriminate the post-restoration changes in soil morphology within the study site, and that these changes correspond to patterns of vascular plant diversity. Soil diversity and dynamism increased five years after the restoration, but typical soils of braided rivers were still missing. Soil typicality and dynamism correlated to vegetation changes. These results suggest a limited success of the project in agreement with evaluations carried out at the same site using other, more resource demanding methods (e.g. soil fauna, fish, ecosystem functioning. Soil morphology provides structural and functional information on floodplain ecosystems and allows predicting broad changes in plant diversity. The spatio-temporal heterogeneity of soil morphology represents a cost-efficient ecological indicator that could easily be integrated into rapid assessment protocols of floodplain and river restoration projects.

  1. A Statistical Physics Characterization of the Complex Systems Dynamics: Quantifying Complexity from Spatio-Temporal Interactions

    Science.gov (United States)

    Koorehdavoudi, Hana; Bogdan, Paul

    2016-06-01

    Biological systems are frequently categorized as complex systems due to their capabilities of generating spatio-temporal structures from apparent random decisions. In spite of research on analyzing biological systems, we lack a quantifiable framework for measuring their complexity. To fill this gap, in this paper, we develop a new paradigm to study a collective group of N agents moving and interacting in a three-dimensional space. Our paradigm helps to identify the spatio-temporal states of the motion of the group and their associated transition probabilities. This framework enables the estimation of the free energy landscape corresponding to the identified states. Based on the energy landscape, we quantify missing information, emergence, self-organization and complexity for a collective motion. We show that the collective motion of the group of agents evolves to reach the most probable state with relatively lowest energy level and lowest missing information compared to other possible states. Our analysis demonstrates that the natural group of animals exhibit a higher degree of emergence, self-organization and complexity over time. Consequently, this algorithm can be integrated into new frameworks to engineer collective motions to achieve certain degrees of emergence, self-organization and complexity.

  2. Spatio-Temporal Variations and Source Apportionment of Water Pollution in Danjiangkou Reservoir Basin, Central China

    Directory of Open Access Journals (Sweden)

    Pan Chen

    2015-05-01

    Full Text Available Understanding the spatio-temporal variation and the potential source of water pollution could greatly improve our knowledge of human impacts on the environment. In this work, data of 11 water quality indices were collected during 2012–2014 at 10 monitoring sites in the mainstream and major tributaries of the Danjiangkou Reservoir Basin, Central China. The fuzzy comprehensive assessment (FCA, the cluster analysis (CA and the discriminant analysis (DA were used to assess the water pollution status and analyze its spatio-temporal variation. Ten sites were classified by the high pollution (HP region and the low pollution (LP region, while 12 months were divided into the wet season and the dry season. It was found that the HP region was mainly in the small tributaries with small drainage areas and low average annual discharges, and it was also found that most of these rivers went through urban areas with industrial and domestic sewages input into the water body. Principal component analysis/factor analysis (PCA/FA was applied to reveal potential pollution sources, whereas absolute principal component score-multiple linear regression (APCS-MLR was used to identify their contributions to each water quality variable. The study area was found as being generally affected by industrial and domestic sewage. Furthermore, the HP region was polluted by chemical industries, and the LP region was influenced by agricultural and livestock sewage.

  3. An exact stochastic hybrid model of excitable membranes including spatio-temporal evolution.

    Science.gov (United States)

    Buckwar, Evelyn; Riedler, Martin G

    2011-12-01

    In this paper, we present a mathematical description for excitable biological membranes, in particular neuronal membranes. We aim to model the (spatio-) temporal dynamics, e.g., the travelling of an action potential along the axon, subject to noise, such as ion channel noise. Using the framework of Piecewise Deterministic Processes (PDPs) we provide an exact mathematical description-in contrast to pseudo-exact algorithms considered in the literature-of the stochastic process one obtains coupling a continuous time Markov chain model with a deterministic dynamic model of a macroscopic variable, that is coupling Markovian channel dynamics to the time-evolution of the transmembrane potential. We extend the existing framework of PDPs in finite dimensional state space to include infinite-dimensional evolution equations and thus obtain a stochastic hybrid model suitable for modelling spatio-temporal dynamics. We derive analytic results for the infinite-dimensional process, such as existence, the strong Markov property and its extended generator. Further, we exemplify modelling of spatially extended excitable membranes with PDPs by a stochastic hybrid version of the Hodgkin-Huxley model of the squid giant axon. Finally, we discuss the advantages of the PDP formulation in view of analytical and numerical investigations as well as the application of PDPs to structurally more complex models of excitable membranes. PMID:21243359

  4. A Statistical Physics Characterization of the Complex Systems Dynamics: Quantifying Complexity from Spatio-Temporal Interactions.

    Science.gov (United States)

    Koorehdavoudi, Hana; Bogdan, Paul

    2016-01-01

    Biological systems are frequently categorized as complex systems due to their capabilities of generating spatio-temporal structures from apparent random decisions. In spite of research on analyzing biological systems, we lack a quantifiable framework for measuring their complexity. To fill this gap, in this paper, we develop a new paradigm to study a collective group of N agents moving and interacting in a three-dimensional space. Our paradigm helps to identify the spatio-temporal states of the motion of the group and their associated transition probabilities. This framework enables the estimation of the free energy landscape corresponding to the identified states. Based on the energy landscape, we quantify missing information, emergence, self-organization and complexity for a collective motion. We show that the collective motion of the group of agents evolves to reach the most probable state with relatively lowest energy level and lowest missing information compared to other possible states. Our analysis demonstrates that the natural group of animals exhibit a higher degree of emergence, self-organization and complexity over time. Consequently, this algorithm can be integrated into new frameworks to engineer collective motions to achieve certain degrees of emergence, self-organization and complexity. PMID:27297496

  5. Spatio-temporal modeling and optimization of a deformable-grating compressor for short high-energy laser pulses.

    Science.gov (United States)

    Qiao, J; Papa, J; Liu, X

    2015-10-01

    Monolithic large-scale diffraction gratings are desired to improve the performance of high-energy laser systems and scale them to higher energy, but the surface deformation of these diffraction gratings induce spatio-temporal coupling that is detrimental to the focusability and compressibility of the output pulse. A new deformable-grating-based pulse compressor architecture with optimized actuator positions has been designed to correct the spatial and temporal aberrations induced by grating wavefront errors. An integrated optical model has been built to analyze the effect of grating wavefront errors on the spatio-temporal performance of a compressor based on four deformable gratings. A 1.5-meter deformable grating has been optimized using an integrated finite-element-analysis and genetic-optimization model, leading to spatio-temporal performance similar to the baseline design with ideal gratings. PMID:26480107

  6. Spatio-temporal dependencies between hospital beds, physicians and health expenditure using visual variables and data classification in statistical table

    Science.gov (United States)

    Medyńska-Gulij, Beata; Cybulski, Paweł

    2016-06-01

    This paper analyses the use of table visual variables of statistical data of hospital beds as an important tool for revealing spatio-temporal dependencies. It is argued that some of conclusions from the data about public health and public expenditure on health have a spatio-temporal reference. Different from previous studies, this article adopts combination of cartographic pragmatics and spatial visualization with previous conclusions made in public health literature. While the significant conclusions about health care and economic factors has been highlighted in research papers, this article is the first to apply visual analysis to statistical table together with maps which is called previsualisation.

  7. Spatio-temporal dependencies between hospital beds, physicians and health expenditure using visual variables and data classification in statistical table

    Directory of Open Access Journals (Sweden)

    Medyńska-Gulij Beata

    2016-06-01

    Full Text Available This paper analyses the use of table visual variables of statistical data of hospital beds as an important tool for revealing spatio-temporal dependencies. It is argued that some of conclusions from the data about public health and public expenditure on health have a spatio-temporal reference. Different from previous studies, this article adopts combination of cartographic pragmatics and spatial visualization with previous conclusions made in public health literature. While the significant conclusions about health care and economic factors has been highlighted in research papers, this article is the first to apply visual analysis to statistical table together with maps which is called previsualisation.

  8. Spatio-temporal transmission patterns of black-band disease in a coral community.

    Directory of Open Access Journals (Sweden)

    Assaf Zvuloni

    Full Text Available BACKGROUND: Transmission mechanisms of black-band disease (BBD in coral reefs are poorly understood, although this disease is considered to be one of the most widespread and destructive coral infectious diseases. The major objective of this study was to assess transmission mechanisms of BBD in the field based on the spatio-temporal patterns of the disease. METHODOLOGY/PRINCIPAL FINDINGS: 3,175 susceptible and infected corals were mapped over an area of 10x10 m in Eilat (northern Gulf of Aqaba, Red Sea and the distribution of the disease was examined monthly throughout almost two full disease cycles (June 2006-December 2007. Spatial and spatio-temporal analyses were applied to infer the transmission pattern of the disease and to calculate key epidemiological parameters such as (basic reproduction number. We show that the prevalence of the disease is strongly associated with high water temperature. When water temperatures rise and disease prevalence increases, infected corals exhibit aggregated distributions on small spatial scales of up to 1.9 m. Additionally, newly-infected corals clearly appear in proximity to existing infected corals and in a few cases in direct contact with them. We also present and test a model of water-borne infection, indicating that the likelihood of a susceptible coral becoming infected is defined by its spatial location and by the relative spatial distribution of nearby infected corals found in the site. CONCLUSIONS/SIGNIFICANCE: Our results provide evidence that local transmission, but not necessarily by direct contact, is likely to be an important factor in the spread of the disease over the tested spatial scale. In the absence of potential disease vectors with limited mobility (e.g., snails, fireworms in the studied site, water-borne infection is likely to be a significant transmission mechanism of BBD. Our suggested model of water-borne transmission supports this hypothesis. The spatio-temporal analysis also points

  9. Spatio-temporal patterns of forest carbon dioxide ex change based on global eddy covariance measurements

    Institute of Scientific and Technical Information of China (English)

    WANG XingChang; WANG ChuanKuan; YU GuiRui

    2008-01-01

    Spatio-temporal patterns and driving mechanisms of forest carbon dioxide (CO2) exchange are the key issues on terrestrial ecosystem carbon cycles, which are the basis for developing and validating ecosystem carbon cycle models, assessing and predicting the role of forests in global carbon balance.Eddy covariance (EC) technique, an important method for measuring energy and material exchanges between terrestrial ecosystems and the atmosphere, has made a great contribution to understanding CO2 exchanges in the biosphere during the past decade. Here, we synthesized published EC flux measurements at various forest sites in the global network of eddy flux tower sites (FLUXNET) and regional flux networks. Our objective was to explore spatio-temporal patterns and driving factors on forest carbon fluxes, i.e. net ecosystem productivity (NEP), gross primary productivity (GPP) and total ecosystem respiration (TER). Globally, forest NEP exhibited a significant latitudinal pattern jointly controlled by GPP and TER. The NEP decreased in an order of warm temperate forest > cold temperate and tropical rain forests > boreal and subalpine forests. Mean annual temperature (MAT) made a greater contribution to forest carbon fluxes than sum of annual precipitation (SAP). As MAT increased, the GPP increased linearly, whereas the TER increased exponentially, resulting in the NEP decreasing beyond an MAT threshold of 20℃. The GPP, TER and NEP varied substantially when the SAP was less than 1500 mm, but tended to increase with increasing SAP. Temporal dynamics in forest carbon fluxes and determinants depended upon time scales. NEP showed a significant interannual variability mainly driven by climate fluctuations and different responses of the GPP and TER to environmental forcing. In a longer term, forest carbon fluxes had a significant age effect. The ecosystem was a net carbon source right after clearcutting, gradually switched to a net carbon sink when the relative stand age (i

  10. Spatio-temporal patterns of forest carbon dioxide exchange based on global eddy covariance measurements

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Spatio-temporal patterns and driving mechanisms of forest carbon dioxide (CO2) exchange are the key issues on terrestrial ecosystem carbon cycles, which are the basis for developing and validating ecosystem carbon cycle models, assessing and predicting the role of forests in global carbon balance. Eddy covariance (EC) technique, an important method for measuring energy and material exchanges between terrestrial ecosystems and the atmosphere, has made a great contribution to understanding CO2 exchanges in the biosphere during the past decade. Here, we synthesized published EC flux measurements at various forest sites in the global network of eddy flux tower sites (FLUXNET) and regional flux networks. Our objective was to explore spatio-temporal patterns and driving factors on forest carbon fluxes, i.e. net ecosystem productivity (NEP), gross primary productivity (GPP) and total ecosystem respiration (TER). Globally, forest NEP exhibited a significant latitudinal pattern jointly controlled by GPP and TER. The NEP decreased in an order of warm temperate forest > cold temperate and tropical rain forests > boreal and subalpine forests. Mean annual temperature (MAT) made a greater contribution to forest carbon fluxes than sum of annual precipitation (SAP). As MAT increased, the GPP increased linearly, whereas the TER increased exponentially, resulting in the NEP decreasing beyond an MAT threshold of 20°C. The GPP, TER and NEP varied substantially when the SAP was less than 1500 mm, but tended to increase with increasing SAP. Temporal dynamics in forest carbon fluxes and determinants depended upon time scales. NEP showed a significant interannual variability mainly driven by climate fluctuations and different responses of the GPP and TER to environmental forcing. In a longer term, forest carbon fluxes had a significant age effect. The ecosystem was a net carbon source right after clearcutting, gradually switched to a net carbon sink when the relative stand age (i

  11. Spatio-Temporal Effect on Soil Respiration in Fine-Scale Patches in a Desert Ecosystem

    Institute of Scientific and Technical Information of China (English)

    S. PEN-MOURATOV; M. RAKHIMBAEV; Y. STEINBERGER

    2006-01-01

    Soil organisms in terrestrial systems are unevenly distributed in time and space, and often aggregated. Spatiotemporal patchiness in the soil environment is thought to be crucial for the maintenance of soil biodiversity, providing diverse microhabitats tightly interweaving with resource partitioning. Determination of a "scale unit" to help understandecological processes has become one of the important and most debatable problems in recent years. A fieldwork was carried out in the northern Negev Desert highland, Israel to determine the influence of fine-scale landscape patch moisture heterogeneity on biogeochemical variables and microbial activity linkage in a desert ecosystem. The results showed that the spatio-temporal patchiness of soil moisture to which we attribute influential properties, was found to become more heterogenic with the decrease in soil moisture availability (from 8.2 to 0.4 g kg-1) toward the hot, dry seasons, with coefficient of variation (CV) change amounting to 66.9%. Spatio-temporal distribution of organic matter (OM) and total soluble nitrogen (TSN) was found to be relatively uniformly distributed throughout the wet seasons (winter and spring),with increase of relatively high heterogeneity toward the dry seasons (from 0.25% to 2.17% for OM, and from 0 to 10.2 mg kg-1 for TSN) with CV of 47.4% and 99.7% for OM and TSN, respectively. Different spatio-temporal landscape patterns were obtained for Ca (CV = 44.6%), K (CV = 34.4%), and Na (CV = 92%) ions throughout the study period. CO2evolution (CV = 48.6%) was found to be of lower heterogeneity (varying between 2 and 39 g CO2-C g-1 dry soil h-1) in the moist seasons, e.g., winter and spring, with lower values of respiration coupled with high heterogeneity of Na+ and low levels of TSN and organic matter content, and with more homogeneity in the dry seasons (varying between 1 and 50g CO2-C g-1 dry soil h-1). Our results elucidate the heterogeneity and complexity of desert system habitats affecting

  12. Challenges for modelling spatio-temporal variations of malaria risk in Malawi

    Science.gov (United States)

    Lowe, R.; Chirombo, J.; Tompkins, A. M.

    2012-04-01

    Malaria is the leading cause of morbidity and mortality in Malawi with more than 6 million episodes reported each year. Malaria poses a huge economic burden to Malawi in terms of the direct cost of treating malaria patients and also indirect costs resulting from workdays lost in agriculture and industry and absenteeism from school. Malawi implements malaria control activities within the Roll Back Malaria framework, with the objective to provide those most at risk (i.e. children under five years, pregnant woman and individuals with suppressed immune systems) access to personal and community protective measures. However, at present there is no mechanism by which to target the most 'at risk' populations ahead of an impending epidemic. Malaria transmission is influenced by variations in meteorological conditions, which impact the biology of the mosquito and the availability of breeding sites, but also socio-economic conditions such as levels of urbanisation, poverty and education, which influence human vulnerability and vector habitat. The many potential drivers of malaria, both extrinsic, such as climate, and intrinsic, such as population immunity are often difficult to disentangle. This presents a challenge for modelling of malaria risk in space and time. Using an age-stratified spatio-temporal dataset of malaria cases at the district level from July 2004 - June 2011, we use a spatio-temporal modelling framework to model variations in malaria risk in Malawi. Climatic and topographic variations are accounted for using an interpolation method to relate gridded products to administrative districts. District level data is tested in the model to account for confounding factors, including the proportion of the population living in urban areas; residing in traditional housing; with no toilet facilities; who do not attend school, etc, the number of health facilities per population and yearly estimates of insecticide-treated mosquito net distribution. In order to account for

  13. Predicting gross primary production with high spatio-temporal resolution remote sensing datasets at regional scale

    Science.gov (United States)

    Fu, D.; Chen, B.

    2012-04-01

    Remote sensing has great potential for estimating gross primary production (GPP) without resorting to interpolation of many surface observations. Meanwhile, it can be applied to analyzing the variation of GPP at different ecosystems across a wide range of spatial, temporal, and spectral resolutions. However, the availability of input data for remote-sensing-based GPP models is the bottleneck. The input data of remote-sensing-based greenness and radiation (GR) model is more independent on climate or ground-based observations, and the result is promising. Previous work using this modeling approach only used coarse spatial resolution data (e.g. MODerate resolution Imaging Spectroradiometer, MODIS), the estimated spatio-temporal distributions of GPP with higher resolution remains unclear. To overcome this limitation, a modified image fusion method was developed based on Enhanced Spatial and Temporal Adaptive Reflectance Fusion Model (mESTARFM), producing images with high spatial and temporal resolutions based on Landsat Thematic Mapper (TM) / Enhanced TM Plus (ETM+) (high spatial resolution, low temporal resolution) and MODIS (low spatial resolution, high temporal resolution). Meanwhile, the Simple Analytical Footprint model on Eulerian coordinates (SAFE) model to estimate the flux tower's footprint, which will be helpful for GR model's calibration, and improve the accuracy of GPP estimate. In the study, twelve flux sites belonging to Fluxnet-Canada Research Network (FCRN)/Canadian Carbon Program (CCP) were selected, covering grassland, forest, and wetland biomes. The remote sensing dataset acquired in this study for each site include MODIS reflectance product (MOD09A1, 500 m), Landsat TM /ETM+ (30 m), MODIS BRDF/ Albedo model parameter product (MCD43A1, 500 m), MODIS BRDF/ Albedo quality product (MCD43A2, 500 m). The steps are as follows:: (i) Landsat TM /ETM+ and MODIS data were used as mESTARFM inputs to produce reflectance datasets with high spatio-temporal

  14. Extensive spatio-temporal analyses of surface ozone and related meteorological variables in South Korea for 1999–2010

    Directory of Open Access Journals (Sweden)

    J. Seo

    2014-01-01

    Full Text Available Spatio-temporal characteristics of surface ozone (O3 variations over South Korea are investigated with consideration of meteorological factors and time-scales based on the Kolmogorov–Zurbenko filter (KZ-filter, using measurement data at 124 air quality monitoring sites and 72 weather stations for the 12 yr period of 1999–2010. In general, O3 levels at coastal cities are high due to dynamic effects of the sea breeze while those at the inland and Seoul Metropolitan Area (SMA cities are low due to the NOx titration by local precursor emissions. We examine the meteorological influences on the O3 using a combined analysis of the KZ-filter and linear regressions between O3 and meteorological variables. We decomposed O3 time-series at each site into short-term, seasonal, and long-term components by the KZ-filter and regressed them on meteorological variables. Impact of temperature on the O3 levels is significantly high in the highly populated SMA and inland region while that is low in the coastal region. In particular, the probability of high-O3 occurrence doubled with 4 °C of temperature increase in the SMA during high-O3 months (May to October. It implies that those regions will experience frequent high-O3 events in the future warming climate. In terms of short-term variation, distribution of high-O3 probability classified by wind direction shows the effect of both local precursor emissions and long-range transport from China. In terms of long-term variation, the O3 concentrations have increased by +0.26 ppbv yr−1 on nationwide average, but their trends show large spatial variability. Additional statistical analysis of the singular value decomposition further reveals that the long-term temporal evolution of O3 is similar to that of the nitrogen dioxide measurement although the spatial distributions of their trends are different. This study would be helpful as a reference for diagnostics and evaluation of regional- and local-scale O3 and

  15. Spatio-temporal modelling of foot-and-mouth disease outbreaks.

    Science.gov (United States)

    Malesios, C; Demiris, N; Kostoulas, P; Dadousis, K; Koutroumanidis, T; Abas, Z

    2016-09-01

    We present and analyse data collected during a severe epidemic of foot-and-mouth disease (FMD) that occurred between July and September 2000 in a region of northeastern Greece with strategic importance since it represents the southeastern border of Europe and Asia. We implement generic Bayesian methodology, which offers flexibility in the ability to fit several realistically complex models that simultaneously capture the presence of 'excess' zeros, the spatio-temporal dependence of the cases, assesses the impact of environmental noise and controls for multicollinearity issues. Our findings suggest that the epidemic was mostly driven by the size and the animal type of each farm as well as the distance between farms while environmental and other endemic factors were not important during this outbreak. Analyses of this kind may prove useful to informing decisions related to optimal control measures for potential future FMD outbreaks as well as other acute epidemics such as FMD.

  16. Deciphering the spatio-temporal regulation of entry and progression through mitosis.

    Science.gov (United States)

    Gheghiani, Lilia; Gavet, Olivier

    2014-02-01

    Mitosis has been studied since the early 1880s as a key event of the cell division cycle where remarkable changes in cellular architecture take place and ultimately lead to an equal segregation of duplicated chromosomes into two daughter cells. A detailed description of the complex and highly ordered cellular events taking place is now available. Many regulators involved in key steps including entry into mitosis, nuclear envelope breakdown, microtubule (MT) spindle formation, and chromosome attachment, as well as mitotic exit and cytokinesis, have also been identified. However, understanding the precise spatio-temporal contribution of each regulator in the cell reorganization process has been technically challenging. This review will focus on a number of recent advances in our understanding of the spatial distribution of protein activities and the temporal regulation of their activation and inactivation during entry and progression through mitosis by the use of intramolecular Förster resonance energy transfer (FRET)-based biosensors. PMID:24421267

  17. Spatio-Temporal Analyses of CH4 and SO2 over Pakistan

    Science.gov (United States)

    Mahmood, Irfan; Imran Shahzad, Muhammad; Farooq Iqbal, Muhammad

    2016-07-01

    SO2 and associated compounds are one of main atmospheric pollutant. Moreover, methane - a potent greenhouse gas can also deteriorate the air quality of the region under certain chemical and meteorological conditions. Role of such gases in regional air quality of Pakistan have not been significantly studied. This study involves the analyses of CH4 and SO2 in terms of spatio-temporal distribution over Pakistan from the period 2004 - 2014 using space borne sensors namely Ozone Monitoring Instrument (OMI) and Advanced Infrared Sounder Instrument (AIRS) respectively. Results show an increase in SO2 concentration attributed to trans-boundary sources. Monthly Methane total column results show an increase in atmospheric concentration of methane for the period 2004-2014. Results of the study are complimented by calculating the back trajectories to identify the transport paths. The study significantly describes the regional description and convection phenomenon for SO2 and CH4.

  18. Spatio-Temporal Video Segmentation with Shape Growth or Shrinkage Constraint

    Science.gov (United States)

    Tarabalka, Yuliya; Charpiat, Guillaume; Brucker, Ludovic; Menze, Bjoern H.

    2014-01-01

    We propose a new method for joint segmentation of monotonously growing or shrinking shapes in a time sequence of noisy images. The task of segmenting the image time series is expressed as an optimization problem using the spatio-temporal graph of pixels, in which we are able to impose the constraint of shape growth or of shrinkage by introducing monodirectional infinite links connecting pixels at the same spatial locations in successive image frames. The globally optimal solution is computed with a graph cut. The performance of the proposed method is validated on three applications: segmentation of melting sea ice floes and of growing burned areas from time series of 2D satellite images, and segmentation of a growing brain tumor from sequences of 3D medical scans. In the latter application, we impose an additional intersequences inclusion constraint by adding directed infinite links between pixels of dependent image structures.

  19. Spatio-Temporal Structuring of Brain Activity - Description of Interictal EEG in Paediatric Frontal Lobe Epilepsy

    CERN Document Server

    Bunk, W; Kluger, G; Springer, S

    2009-01-01

    A method for the quantitative assessment of spatio-temporal structuring of brain activity is presented. This approach is employed in a longitudinal case study of a child with frontal lobe epilepsy (FLE) and tested against an age-matched control group. Several correlation measures that are sensitive to linear and/or non-linear relations in multichannel scalp EEG are combined with an hierarchical cluster algorithm. Beside a quantitative description of the overall degree of synchronization the spatial relations are investigated by means of the cluster characteristics. The chosen information measures not only demonstrate their suitability in the characterization of the ictal and interictal phases but they also follow the course of delayed recovery of the psychiatric symptomatology during successful medication. The results based on this single case study suggest testing this approach for quantitative control of therapy in an extended clinical trial.

  20. A scanning drift tube apparatus for spatio-temporal mapping of electron swarms

    CERN Document Server

    Korolov, I; Bastykova, N Kh; Donko, Z

    2016-01-01

    A "scanning" drift tube apparatus, capable of mapping of the spatio-temporal evolution of electron swarms, developing between two plane electrodes under the effect of a homogeneous electric field, is presented. The electron swarms are initiated by photoelectron pulses and the temporal distributions of the electron flux are recorded while the electrode gap length (at a fixed electric field strength) is varied. Operation of the system is tested and verified with argon gas, the measured data are used for the evaluation of the electron bulk drift velocity. The experimental results for the space-time maps of the electron swarms - presented here for the first time - also allow clear observation of deviations from hydrodynamic transport. The swarm maps are also reproduced by particle simulations.

  1. Spatio-temporal Modeling of Lasing Action in Core–Shell Metallic Nanoparticles

    Science.gov (United States)

    2016-01-01

    Nanoscale laser sources based on single metallic nanoparticles (spasers) have attracted significant interest for their fundamental implications and technological potential. Here we theoretically investigate the spatio-temporal dynamics of lasing action in core–shell metallic nanoparticles that include optically pumped four-level gain media. By using detailed semiclassical simulations based on a time-domain generalization of the finite-element method, we study the evolution of the lasing dynamics when going from a spherical case to an elongated nanorod configuration. Our calculations show that there exists an optimal nanoparticle elongation that exhibits significantly improved lasing threshold and slope efficiency over those obtained for its spherical counterpart. These results are accounted for in terms of a coupled-mode theory analysis of the variation with elongation of the light confinement properties of localized surface plasmons. This work could be of importance for further development of nanoscale light sources based on localized surface plasmon resonances.

  2. Spatio-temporal modelling of foot-and-mouth disease outbreaks.

    Science.gov (United States)

    Malesios, C; Demiris, N; Kostoulas, P; Dadousis, K; Koutroumanidis, T; Abas, Z

    2016-09-01

    We present and analyse data collected during a severe epidemic of foot-and-mouth disease (FMD) that occurred between July and September 2000 in a region of northeastern Greece with strategic importance since it represents the southeastern border of Europe and Asia. We implement generic Bayesian methodology, which offers flexibility in the ability to fit several realistically complex models that simultaneously capture the presence of 'excess' zeros, the spatio-temporal dependence of the cases, assesses the impact of environmental noise and controls for multicollinearity issues. Our findings suggest that the epidemic was mostly driven by the size and the animal type of each farm as well as the distance between farms while environmental and other endemic factors were not important during this outbreak. Analyses of this kind may prove useful to informing decisions related to optimal control measures for potential future FMD outbreaks as well as other acute epidemics such as FMD. PMID:27150839

  3. Modelling individual routines and spatio-temporal trajectories in human mobility

    CERN Document Server

    Pappalardo, Luca

    2016-01-01

    Human mobility modelling is of fundamental importance in a wide range of applications, such as the developing of protocols for mobile ad hoc networks or for what-if analysis and simulation in urban ecosystems. Current generative models generally fail in accurately reproducing the individuals' recurrent daily schedules and at the same time in accounting for the possibility that individuals may break the routine and modify their habits during periods of unpredictability of variable duration. In this article we present DITRAS (DIary-based TRAjectory Simulator), a framework to simulate the spatio-temporal patterns of human mobility in a realistic way. DITRAS operates in two steps: the generation of a mobility diary and the translation of the mobility diary into a mobility trajectory. The mobility diary is constructed by a Markov model which captures the tendency of individuals to follow or break their routine. The mobility trajectory is produced by a model based on the concept of preferential exploration and pref...

  4. A collaborative large spatio-temporal data visual analytics architecture for emergence response

    International Nuclear Information System (INIS)

    The unconventional emergency, usually outbreaks more suddenly, and is diffused more quickly, but causes more secondary damage and derives more disaster than what it is usually expected. The data volume and urgency of emergency exceeds the capacity of current emergency management systems. In this paper, we propose a three-tier collaborative spatio-temporal visual analysis architecture to support emergency management. The prototype system, based on cloud computation environment, supports aggregation of massive unstructured and semi-structured data, integration of various computing model sand algorithms; collaborative visualization and visual analytics among users with a diversity of backgrounds. The distributed data in 100TB scale is integrated in a unified platform and shared with thousands of experts and government agencies by nearly 100 models. The users explore, visualize and analyse the big data and make a collaborative countermeasures to emergencies

  5. Leaders and followers: Quantifying consistency in spatio-temporal propagation patterns

    CERN Document Server

    Kreuz, Thomas; Pofahl, Martin; Mulansky, Mario

    2016-01-01

    Repetitive spatio-temporal propagation patterns are encountered in fields as wide-ranging as climatology, social communication and network science. In neuroscience, perfectly consistent repetitions of the same global propagation pattern are called a synfire pattern. For any recording of sequences of discrete events (in neuroscience terminology: sets of spike trains) the questions arise how closely it resembles such a synfire pattern and which are the spike trains that lead/follow. Here we address these questions and introduce an algorithm built on two new indicators, termed SPIKE-Order and Spike Train Order, that define the Synfire Indicator value, which allows to sort multiple spike trains from leader to follower and to quantify the consistency of the temporal leader-follower relationships for both the original and the optimized sorting. We demonstrate our new approach using artificially generated datasets before we apply it to analyze the consistency of propagation patterns in two real datasets from neurosc...

  6. Spatio-temporal processing of massive glottic images from high-speed videoendoscopy

    Science.gov (United States)

    Yan, Yuling; Izdebski, Krzysztof; Marriott, Emma

    2011-03-01

    We present here development and application of new approaches for quantitative spatio-temporal analyses of vocal fold (VF) vibrations derived from high-speed digital imaging (HSDI) data of the glottis. We develop image processing methods to track the motion of the VF and target the analysis of HSDI-derived glottal area waveform (GAW), glottal width function (GWF) and displacements of the VF tissues for the characterization of the VF dynamic properties. In particular, a combined threshold and region growing method is used for the glottis segmentation, and an analytic signal approach and the Nyquist plot and associated parameters are used to represent and to characterize the VF vibratory behaviors in normal and specific pathologic voice productions.

  7. Spatio-temporal imaging of light transport in scattering media using white light illumination (Conference Presentation)

    Science.gov (United States)

    Badon, Amaury; Li, Dayan; Lerosey, Geoffroy; Boccara, Claude; Fink, Mathias; Aubry, Alexandre

    2016-03-01

    We recently showed how the correlations of a broadband and incoherent wave-field can directly yield the time-dependent Green's functions between scatterers of a complex medium [Badon et al., Phys. Rev. Lett., 2015]. In this study, we apply this approach to the imaging of optical transport properties in complex media. A parallel measurement of millions of Green's functions at the surface of several strongly scattering samples (ZnO, TiO2, Teflon tape) is performed. A statistical analysis of this Green's matrix allows to investigate locally the spatio-temporal evolution of the diffusive halo within the scattering sample. An image of diffusion tensor is then obtained. It allows to map quantitatively the local concentration of scatterers and their anisotropy within the scattering medium. The next step of this work is to test this approach on biological tissues and illustrate how it can provide an elegant and powerful alternative to diffuse optical imaging techniques.

  8. Spatio-temporal population genetics of the Danish pine marten (Martes martes)

    DEFF Research Database (Denmark)

    Pertoldi, Cino; Barker, Stuart F; Madsen, Aksel Bo;

    2008-01-01

    (from 1970) groups. As compared with the historical samples, there was a significant loss of genetic variation in the recent Jutland population, but not in Sealand. Effective population sizes were estimated using Bayesian-based software (TMVP). Historical effective population sizes were 5897 (90......A spatio-temporal study of genetic variation in the Danish pine marten (Martes martes) populations from the Jutland peninsula and from the island of Sealand was performed using 11 microsatellite markers. Samples obtained from 1892 to 2003 were subdivided into historical (prior to 1970) and recent......% highest probability density, HPD, limits: 1502-6849) in Jutland and 1300 (90% HPD limits: 224-5929) in Sealand, whereas recent effective population sizes were 14.7 (90% HPD limits: 10.9-23.5) in Jutland and 802 (90% HPD limits: 51.8-5510) in Sealand. Significant genetic differentiation (FST) was found...

  9. Incorporating social contact data in spatio-temporal models for infectious disease spread

    CERN Document Server

    Meyer, Sebastian

    2015-01-01

    Routine public health surveillance of notifiable infectious diseases gives rise to weekly counts of reported cases - possibly stratified by region and/or age group. A well-established approach to the statistical analysis of such surveillance data are endemic-epidemic time-series models. The temporal dependence inherent to communicable diseases is thereby taken into account by an observation-driven formulation conditioning on past counts. Additional spatial dynamics in areal-level counts are largely driven by human travel and can be captured by power-law weights based on the order of adjacency. However, social contacts are highly assortative also with respect to age. For example, characteristic pathways of directly transmitted pathogens are linked to childcare facilities, schools and nursing homes. We therefore investigate how a spatio-temporal endemic-epidemic model can be extended to take social contact data into account. The approach is illustrated in a case study on norovirus gastroenteritis in Berlin, 201...

  10. On the spatio-temporal behavior of magnetohydrodynamic turbulence in a magnetized plasma

    CERN Document Server

    Lugones, R; Mininni, P D; Wan, M; Matthaeus, W H

    2016-01-01

    Using direct numerical simulations of three-dimensional magnetohydrodynamic (MHD) turbulence the spatio-temporal behavior of magnetic field fluctuations is analyzed. Cases with relatively small, medium and large values of a mean background magnetic field are considered. The (wavenumber) scale dependent time correlation function is directly computed for different simulations, varying the mean magnetic field value. From this correlation function the time decorrelation is computed and compared with different theoretical times, namely, the local non-linear time, the random sweeping time, and the Alfv\\'enic time, the latter being a wave effect. It is observed that time decorrelations are dominated by sweeping effects, and only at large values of the mean magnetic field and for wave vectors mainly aligned with this field time decorrelations are controlled by Alfv\\'enic effects.

  11. Double Phase Slips and Spatio-Temporal Chaos in a Model for Parametrically Excited Standing Waves

    CERN Document Server

    Granzow, G D; Granzow, Glen D.; Riecke, Hermann

    1996-01-01

    We present results of numerical simulations of coupled Ginzburg-Landau equations that describe parametrically excited waves. In one dimension we focus on a new regime in which the Eckhaus sideband instability does not lead to an overall change in the wavelength via the occurrence of a single phase slip but instead leads to ``double phase slips''. They are characterized by the phase slips occurring in sequential pairs, with the second phase slip quickly following and negating the first. The resulting dynamics range from transient excursions from a fixed point resembling those seen in excitable media, to periodic solutions of varying complexity and chaotic solutions. In larger systems we find in addition localized spatio-temporal chaos, where the solution consists of a chaotic region with quiescent regions on each side. We explain the localization using an effective phase diffusion equation which can be viewed as arising from a homogenization of the chaotic state. In two dimensions the double phase slips are re...

  12. Writer Identification Using Super Paramagnetic Clustering and Spatio Temporal Neural Network

    Science.gov (United States)

    Taghavi Sangdehi, Seyyed Ataollah; Faez, Karim

    This paper discusses use of Super Paramagnetic Clustering (SPC) and Spatio Temporal Artificial Neuron in on-line writer identification, on Farsi handwriting. In online cases, speed and automation are advantages of one method on others, therefore we used unsupervised and relatively quick clustering method, which in comparison with conventional approaches, give us better result. Moreover, regardless of various parameters that available from acquisition systems, we only consider to displacement of pen tip at determined direction that lead to quick system due to its quick preprocessing and clustering. Also we use a threshold that remove displacement between disconnected point of a word that lead to a better classification result on on-line Farsi writers.

  13. Neural network structure for spatio-temporal long-term memory.

    Science.gov (United States)

    Nguyen, Vu Anh; Starzyk, Janusz A; Goh, Wooi-Boon; Jachyra, Daniel

    2012-06-01

    This paper proposes a neural network structure for spatio-temporal learning and recognition inspired by the long-term memory (LTM) model of the human cortex. Our structure is able to process real-valued and multidimensional sequences. This capability is attained by addressing three critical problems in sequential learning, namely the error tolerance, the significance of sequence elements and memory forgetting. We demonstrate the potential of the framework with a series of synthetic simulations and the Australian sign language (ASL) dataset. Results show that our LTM model is robust to different types of distortions. Second, our LTM model outperforms other sequential processing models in a classification task for the ASL dataset. PMID:24806767

  14. Spatio-temporal correlations in models of collective motion ruled by different dynamical laws

    CERN Document Server

    Cavagna, Andrea; Giardina, Irene; Grigera, Tomas S; Melillo, Stefania; Viale, Massimiliano

    2016-01-01

    Information transfer is an essential factor in determining the robustness of collective behaviour in biological systems with distributed control. The most direct way to study the information transfer mechanisms is to experimentally detect the propagation across the system of a signal triggered by some perturbation. However, for field experiments this method is inefficient, as the possibilities of the observer to perturb the group are limited and empirical observations must rely on rare natural perturbations. An alternative way is to use spatio-temporal correlations to assess the information transfer mechanism directly from the spontaneous fluctuations of the system, without the need to have an actual propagating signal on record. We test the approach on ground truth data provided by numerical simulations in three dimensions of two models of collective behaviour characterized by very different dynamical equations and information transfer mechanisms: the classic Vicsek model, describing an overdamped noninertia...

  15. Assessment of soil organic carbon distribution in Europe scale by spatio-temporal data and geostatistics

    Science.gov (United States)

    Aksoy, Ece; Panagos, Panos; Montanarella, Luca

    2013-04-01

    Accuracy in assessing the distribution of soil organic carbon (SOC) is an important issue because SOC is an important soil component that plays key roles in the functions of both natural ecosystems and agricultural systems. The SOC content varies from place to place and it is strongly related with climate variables (temperature and rainfall), terrain features, soil texture, parent material, vegetation, land-use types, and human management (management and degradation) at different spatial scales. Geostatistical techniques allow for the prediction of soil properties using soil information and environmental covariates. In this study, assessment of SOC distribution has been predicted using combination of LUCAS soil samples with local soil data and ten spatio-temporal predictors (slope, aspect, elevation, CTI, CORINE land-cover classification, parent material, texture, WRB soil classification, average temperature and precipitation) with Regression-Kriging method in Europe scale. Significant correlation between the covariates and the organic carbon dependent variable was found.

  16. Spatio-temporal variations of black carbon concentrations in the Megacity Beijing.

    Science.gov (United States)

    Schleicher, Nina; Norra, Stefan; Fricker, Mathieu; Kaminski, Uwe; Chen, Yizhen; Chai, Fahe; Wang, Shulan; Yu, Yang; Cen, Kuang

    2013-11-01

    The spatial and temporal distribution and the flux of black carbon (BC) concentration in Beijing were continuously investigated over a two-year period at five sites to highlight the relative influence of contributing sources. The results demonstrate firstly that there is significant spatio-temporal variability of BC in Beijing. Highest concentrations occurred during winter primarily due to stagnant meteorological conditions, and seasonal BC sources, such as coal combustion for heating purposes. Biomass burning was identified as a minor seasonal source during the summer months. BC also varied spatially with higher concentrations in the SE of Beijing and lower concentrations in the NW, due to the differing emission intensity of various local BC sources such as traffic and industry. Frequently, overnight BC concentrations were higher due to specific meteorological conditions, such as the lower urban mixing layer height and various anthropogenic activities, such as exclusive night-time heavy duty vehicle traffic in the inner-city.

  17. A customized light sheet microscope to measure spatio-temporal protein dynamics in small model organisms.

    Directory of Open Access Journals (Sweden)

    Matthias Rieckher

    Full Text Available We describe a customizable and cost-effective light sheet microscopy (LSM platform for rapid three-dimensional imaging of protein dynamics in small model organisms. The system is designed for high acquisition speeds and enables extended time-lapse in vivo experiments when using fluorescently labeled specimens. We demonstrate the capability of the setup to monitor gene expression and protein localization during ageing and upon starvation stress in longitudinal studies in individual or small groups of adult Caenorhabditis elegans nematodes. The system is equipped to readily perform fluorescence recovery after photobleaching (FRAP, which allows monitoring protein recovery and distribution under low photobleaching conditions. Our imaging platform is designed to easily switch between light sheet microscopy and optical projection tomography (OPT modalities. The setup permits monitoring of spatio-temporal expression and localization of ageing biomarkers of subcellular size and can be conveniently adapted to image a wide range of small model organisms and tissue samples.

  18. Risk management in spatio-temporally varying field by true slime mold

    Science.gov (United States)

    Ito, Kentaro; Sumpter, David; Nakagaki, Toshiyuki

    Revealing how lower organisms solve complicated problems is a challenging research area, which could reveal the evolutionary origin of biological information processing. Here we report on the ability of a single-celled organism, true slime mold, to find a smart solution of risk management under spatio-temporally varying conditions. We designed test conditions under which there were three food-locations at vertices of equilateral triangle and a toxic light illuminated the organism on alternating halves of the triangle. We found that the organism behavior depended on the period of the repeated illumination, even though the total exposure time was kept the same . A simple mathematical model for the experimental results is proposed from a dynamical system point of view. We discuss our results in the context of a strategy of risk management by Physarum.

  19. A collaborative large spatio-temporal data visual analytics architecture for emergence response

    Science.gov (United States)

    Guo, D.; Li, J.; Cao, H.; Zhou, Y.

    2014-02-01

    The unconventional emergency, usually outbreaks more suddenly, and is diffused more quickly, but causes more secondary damage and derives more disaster than what it is usually expected. The data volume and urgency of emergency exceeds the capacity of current emergency management systems. In this paper, we propose a three-tier collaborative spatio-temporal visual analysis architecture to support emergency management. The prototype system, based on cloud computation environment, supports aggregation of massive unstructured and semi-structured data, integration of various computing model sand algorithms; collaborative visualization and visual analytics among users with a diversity of backgrounds. The distributed data in 100TB scale is integrated in a unified platform and shared with thousands of experts and government agencies by nearly 100 models. The users explore, visualize and analyse the big data and make a collaborative countermeasures to emergencies.

  20. Exploiting Spatio-Temporal Correlation for Reliable Information Transport in WSNs

    Directory of Open Access Journals (Sweden)

    Faisal Karim Shaikh

    2011-01-01

    Full Text Available Delivering reliable services in service oriented architectures entails the underlying basis of having communication network models and well structured systems. With the rapid proliferation of ad-hoc mode of communication the reliable delivery of services increasingly encounter new communication and network perturbations. Empirically the core of service delivery in WSNs (Wireless Sensor Networks is information transport from the sensor nodes to the sink node where the service resides. In this work we provide a reliable information transport for enhanced service delivery by using spatio-temporal correlation in WSN. The classification for different types of information required by the services is also presented. To overcome dynamic network conditions and evolving service requirements an adaptive retransmission mechanism based on spatial correlation is utilized. Simulation results show that the proposed solutions provide service specific reliability and save expensive retransmissions and thus provide energy efficient solution.

  1. Spatio-temporal population genetic survey of the Danish pine marten (Martes martes)

    DEFF Research Database (Denmark)

    Pertoldi, Cino; Barker, J Stuart F; Madsen, Aksel Bo;

    2008-01-01

    samples indicates changes in the genetic compositions over time, and the higher FST values between the two recent samples, as compared with the two historical samples, indicates that the populations in Sealand and Jutland have drifted apart within a short time span. No deviation from Hardy......A spatio-temporal study of genetic variation in the Danish pine marten (Martes martes) populations from the Jutland peninsula and from the island of Sealand was performed using 11 microsatellite markers. Samples obtained from 1892 to 2003 were subdivided into historical (prior to 1970) and recent...... (from 1970) groups. As compared with the historical samples, there was a significant loss of genetic variation in the recent Jutland population, but not in Sealand. Effective population sizes were estimated using Bayesian-based software (TMVP). Historical effective population sizes were 5897 (90...

  2. Spatio-temporal distribution of global solar radiation for Mexico using GOES data

    Science.gov (United States)

    Bonifaz, R.; Cuahutle, M.; Valdes, M.; Riveros, D.

    2013-05-01

    Increased need of sustainable and renewable energies around the world requires studies about the amount and distribution of such types of energies. Global solar radiation distribution in space and time is a key component on order to know the availability of the energy for different applications. Using GOES hourly data, the heliosat model was implemented for Mexico. Details about the model and its components are discussed step by stem an once obtained the global solar radiation images, different time datasets (hourly, daily, monthly and seasonal) were built in order to know the spatio-temporal behavior of this type of energy. Preliminary maps of the available solar global radiation energy for Mexico are presented, the amount and variation of the solar radiation by regions are analyzed and discussed. Future work includes a better parametrization of the model using calibrated ground stations data and more use of more complex models for better results.

  3. Emergence of spatio-temporal dynamics from exact coherent solutions in pipe flow

    Science.gov (United States)

    Ritter, Paul; Mellibovsky, Fernando; Avila, Marc

    2016-08-01

    Turbulent-laminar patterns are ubiquitous near transition in wall-bounded shear flows. Despite recent progress in describing their dynamics in analogy to non-equilibrium phase transitions, there is no theory explaining their emergence. Dynamical-system approaches suggest that invariant solutions to the Navier-Stokes equations, such as traveling waves and relative periodic orbits in pipe flow, act as building blocks of the disordered dynamics. While recent studies have shown how transient chaos arises from such solutions, the ensuing dynamics lacks the strong fluctuations in size, shape and speed of the turbulent spots observed in experiments. We here show that chaotic spots with distinct dynamical and kinematic properties merge in phase space and give rise to the enhanced spatio-temporal patterns observed in pipe flow. This paves the way for a dynamical-system foundation to the phenomenology of turbulent-laminar patterns in wall-bounded extended shear flows.

  4. Taming of Modulation Instability by Spatio-Temporal Modulation of the Potential

    CERN Document Server

    Kumar, S; Botey, M; Staliunas, K

    2015-01-01

    Spontaneous pattern formation in a variety of spatially extended nonlinear system always occurs through a modulation instability: homogeneous state of the system becomes unstable with respect to growing modulation modes. Therefore, the manipulation of the modulation instability is of primary importance in controlling and manipulating the character of spatial patterns initiated by that instability. We show that the spatio-temporal periodic modulation of the potential of the spatially extended system results in a modification of its pattern forming instability. Depending on the modulation character the instability can be partially suppressed, can change its spectrum (for instance the long wave instability can transform into short wave instability), can split into two, or can be completely eliminated. The latter result is of especial practical interest, as can be used to stabilize the intrinsically unstable system. The result bears general character, as it is shown here on a universal model of Complex Ginzburg-L...

  5. Spatio-temporal patterns in ultra-slow domain wall creep dynamics

    CERN Document Server

    Ferrero, Ezequiel E; Giamarchi, Thierry; Kolton, Alejandro B; Rosso, Alberto

    2016-01-01

    In presence of impurities, ferromagnetic and ferroelectric domain walls slide only above a finite external field. Close to this depinning threshold, the wall proceeds by large and abrupt jumps, called avalanches, while, at much smaller field, it creeps by thermal activation. In this work we develop a novel numerical technique that captures the ultra-slow creep regime over huge time scales. We point out the existence of activated events that involve collective reorganizations similar to avalanches, but, at variance with them, display correlated spatio-temporal patterns that resemble the complex sequence of aftershocks observed after a large earthquake. Remarkably, we show that events assembly in independent clusters owning the same scale-free statistics as critical depinning avalanches. This correlated dynamics should be experimentally accessible by magneto-optical imaging of ferro- magnetic films.

  6. Spatio-temporal dynamics of the white-eye square superlattice pattern in dielectric barrier discharge

    Science.gov (United States)

    Wei, Lingyan; Dong, Lifang; Feng, Jianyu; Liu, Weibo; Fan, Weili; Pan, Yuyang

    2016-05-01

    We report on the first investigation of the white-eye square superlattice pattern (WESSP) in a dielectric barrier discharge system. The evolution of patterns with increasing voltage is given. A phase diagram of WESSP as functions of gas pressure p and argon concentration φ is presented. The spatio-temporal dynamics of the WESSP is studied by using an intensified charge-coupled device camera and photomultipliers. Results show that the WESSP consists of four different transient sublattices, whose discharge sequence is small spots—spots on the line—halos—central spots in each half voltage cycle. The discharge moment and position of each sublattice are dependent upon the field of the wall charges produced by all sublattices discharged previously.

  7. The spatio-temporal Development of Copenhagen's bicycle infrastructure 1912-2013

    DEFF Research Database (Denmark)

    Carstensen, Trine Agervig; Olafsson, Anton Stahl; Bech, Nynne Marie;

    2015-01-01

    Cycling plays an important role in low-carbon transitions. Around the globe, cities are constructing bicycle infrastructure. The city of Copenhagen has a bicycle-friendly infrastructure celebrated for its fine-meshed network. This study documents the spatio-temporal development of Copenhagen....... In search for identifying drivers, the study analyses the city’s spatial growth pattern, migration pattern, development of road network and changes in the transport culture. Analyses reveal that the bicycle infrastructure expanded at a relatively constant pace during distinct periods of urban transformation...... and safety (first cycling city); the flow for cars (car city); urban liveability for soft transport (liveable city); and, finally, to improve the flow for cyclists as part a strategic re-design of urban space (liveable cycling city)....

  8. Mean-field equations for stochastic neural fields with spatio-temporal delays

    CERN Document Server

    Touboul, Jonathan

    2011-01-01

    Neurons form large-scale cell assemblies sharing the same individual properties and receiving the same input, in charge of certain functions. Such assemblies have specific space locations and hence interact after some (space dependent) delay due the transport and transfer of the information. Both delays and spatial connectivity structures are understood to shape the collective response of neural assemblies and brain states that are observed through usual recording techniques. Abstracting this setting, we consider here the problem of the asymptotics, as the number of neurons increases, of bio-inspired neuronal networks composed of several populations (up to a continuum), interacting with spatio-temporal delays. The propagation of chaos property is proved under mild assumptions on the neuronal dynamics, valid for most models used in neuroscience, in both the case of finite number and infinite continuum populations (called neural fields). The mean-field equations in these cases are derived and analyzed from the ...

  9. Spatio-temporal evolution of uranium emission in laser-produced plasmas

    International Nuclear Information System (INIS)

    Laser-induced plasma spectroscopy provides much impetus as a nuclear forensics tool because of its capability of standoff detection and real-time analysis. However, special nuclear materials like U, Pu, etc. provide very crowded spectra and, when combined with shifts and broadening of spectral lines caused by ambient atmospheric operation, generate a complex plasma spectroscopy system. We explored the spatio-temporal evolution of excited U species in a laser ablation plume under various ambient pressure conditions. Plasmas were generated using 1064 nm, 6 ns pulses from a Nd:YAG laser on a U containing glass matrix target. The role of air ambient pressure on U line intensities, signal-to-background ratios, and linewidths were investigated. Spatially and temporally resolved optical time-of-flight emission spectroscopy of excited uranium atoms were used for studying the expansion hydrodynamics and the persistence of U species in the plume. Our results showed that U emission linewidths increased with pressure due to increased Stark broadening; however, the broadening was less than that for Ca. A comparison with U emission features in the presence of an inert gas showed the persistence of U species in plasmas in ambient air is significantly reduced; this could be due to oxide and other reactive species formation. - Highlights: • Spatio-temporal evolution of U species in a multicomponent laser-induced plasma (LIP) is explored. • The linewidth of U species in LIP is compared to other species in a multicomponent system. • The position-time mapping of U species in LIP show complex expansion dynamics with varying pressure levels. • The persistence of U species in LIP is greatly influenced by nature and pressure of the ambient gas. • The plasma chemistry is affecting the persistence of the species as well as analytical merits

  10. Spatio-Temporal Canopy Complexity and Leaf Acclimation to Variable Canopy Microhabitats.

    Science.gov (United States)

    Fotis, A. T.

    2014-12-01

    The theory that forests become carbon (C) neutral with maturity has recently been challenged. While a growing body of evidence shows that net C accumulation continues in forests that are centuries old, the reasons remain poorly known. Increasing canopy structural complexity, quantified by high variability in leaf distribution, has been proposed as a mechanism for sustained rates of C assimilation in mature forests. The goal of our research was to expand on these findings and explore a new idea of spatio-temporal canopy structural complexity as a mechanism linking canopy structure to function (C assimilation).Our work takes place at the UMBS AmeriFlux core facility (US-UMB) in northern Michigan, USA. Canopy structure was quantified over 6 seasons with portable canopy LiDAR (PCL) and canopy spatial microhabitat variability was studied using hemispherical photographs from different heights within the canopy. We found a more even distribution of irradiance in more structurally complex canopies within a single year, and furthermore, that between-year variability of spatial leaf arrangement decreased with increasing canopy complexity. We suggest that in complex canopies less redistribution of leaf material over time may lead to more similar light microhabitats within and among years. Conversely, in less complex canopies this relationship can lead to a year-to-year time lag in morphological leaf acclimation since the effects of the previous-year's light environment are reflected in the morphological characteristics of current-year leaves.Our study harnesses unique spatio-temporal resolution measurements of canopy structure and microhabitat that can inform better management strategies seeking to maximize forest C uptake. Future research quantifying the relationship between canopy structure and light distribution will improve performance of ecosystem models that currently lack spatially explicit canopy structure information.

  11. Spatio-temporal variability of the North Sea cod recruitment in relation to temperature and zooplankton.

    Directory of Open Access Journals (Sweden)

    Delphine Nicolas

    Full Text Available The North Sea cod (Gadus morhua, L. stock has continuously declined over the past four decades linked with overfishing and climate change. Changes in stock structure due to overfishing have made the stock largely dependent on its recruitment success, which greatly relies on environmental conditions. Here we focus on the spatio-temporal variability of cod recruitment in an effort to detect changes during the critical early life stages. Using International Bottom Trawl Survey (IBTS data from 1974 to 2011, a major spatio-temporal change in the distribution of cod recruits was identified in the late 1990s, characterized by a pronounced decrease in the central and southeastern North Sea stock. Other minor spatial changes were also recorded in the mid-1980s and early 1990s. We tested whether the observed changes in recruits distribution could be related with direct (i.e. temperature and/or indirect (i.e. changes in the quantity and quality of zooplankton prey effects of climate variability. The analyses were based on spatially-resolved time series, i.e. sea surface temperature (SST from the Hadley Center and zooplankton records from the Continuous Plankton Recorder Survey. We showed that spring SST increase was the main driver for the most recent decrease in cod recruitment. The late 1990s were also characterized by relatively low total zooplankton biomass, particularly of energy-rich zooplankton such as the copepod Calanus finmarchicus, which have further contributed to the decline of North Sea cod recruitment. Long-term spatially-resolved observations were used to produce regional distribution models that could further be used to predict the abundance of North Sea cod recruits based on temperature and zooplankton food availability.

  12. Spatio-temporal regulation of Hsp90-ligand complex leads to immune activation.

    Directory of Open Access Journals (Sweden)

    Yasuaki eTamura

    2016-05-01

    Full Text Available Hsp90 is the most abundant cytosolic HSP and is known to act as a molecular chaperone. We found that an Hsp90-cancer antigen peptide complex was efficiently cross-presented by human monocyte-derived dendritic cells and induced peptide-specific cytotoxic T lymphocytes. Furthermore, we observed that the internalized Hsp90-peptide complex was strictly sorted to the Rab5+, EEA1+ static early endosome and the Hsp90-chaperoned peptide was processed and bound to MHC class I molecules through a endosome-recycling pathway. We also found that extracellular Hsp90 complexed with CpG-A or self-DNA stimulates production of a large amount of IFN-α from pDCs via static early endosome targeting. Thus, extracellular Hsp90 can target the antigen or nucleic acid to a static early endosome by spatio-temporal regulation. Moreover, we showed that Hsp90 associates with and delivers TLR7/9 from the ER to early endosomes for ligand recognition. Hsp90 inhibitor, geldanamycin derivative inhibited the Hsp90 association with TLR7/9, resulting in inhibition IFN-α production, leading to improvement of SLE symptoms. Interstingly, we observed that serum Hsp90 is clearly increased in patients with active SLE compared with that in patients with inactive disease. Serum Hsp90 detected in SLE patients binds to self-DNA and/or anti-DNA Ab, thus leading to stimulation of pDCs to produce IFN-α. Thus, Hsp90 plays a crucial role in the pathogenesis of SLE and that an Hsp90 inhibitor will therefore provide a new therapeutic approach to SLE and other nucleic acid-related autoimmune diseases. We will discuss how spatio-temporal regulation of Hsp90-ligand complexes within antigen-presenting cells affects the innate immunity and adaptive immunity.

  13. Spatio-temporal evolution of uranium emission in laser-produced plasmas

    Energy Technology Data Exchange (ETDEWEB)

    Harilal, S.S., E-mail: hari@pnnl.gov [Pacific Northwest National Laboratory, P.O. Box 999, Richland, WA 99352 (United States); Diwakar, P.K. [School of Nuclear Engineering, Purdue University, West Lafayette, IN 47907 (United States); LaHaye, N.L.; Phillips, M.C. [Pacific Northwest National Laboratory, P.O. Box 999, Richland, WA 99352 (United States)

    2015-09-01

    Laser-induced plasma spectroscopy provides much impetus as a nuclear forensics tool because of its capability of standoff detection and real-time analysis. However, special nuclear materials like U, Pu, etc. provide very crowded spectra and, when combined with shifts and broadening of spectral lines caused by ambient atmospheric operation, generate a complex plasma spectroscopy system. We explored the spatio-temporal evolution of excited U species in a laser ablation plume under various ambient pressure conditions. Plasmas were generated using 1064 nm, 6 ns pulses from a Nd:YAG laser on a U containing glass matrix target. The role of air ambient pressure on U line intensities, signal-to-background ratios, and linewidths were investigated. Spatially and temporally resolved optical time-of-flight emission spectroscopy of excited uranium atoms were used for studying the expansion hydrodynamics and the persistence of U species in the plume. Our results showed that U emission linewidths increased with pressure due to increased Stark broadening; however, the broadening was less than that for Ca. A comparison with U emission features in the presence of an inert gas showed the persistence of U species in plasmas in ambient air is significantly reduced; this could be due to oxide and other reactive species formation. - Highlights: • Spatio-temporal evolution of U species in a multicomponent laser-induced plasma (LIP) is explored. • The linewidth of U species in LIP is compared to other species in a multicomponent system. • The position-time mapping of U species in LIP show complex expansion dynamics with varying pressure levels. • The persistence of U species in LIP is greatly influenced by nature and pressure of the ambient gas. • The plasma chemistry is affecting the persistence of the species as well as analytical merits.

  14. Spatio-temporal distribution of floating objects in the German Bight (North Sea)

    Science.gov (United States)

    Thiel, Martin; Hinojosa, Iván A.; Joschko, Tanja; Gutow, Lars

    2011-04-01

    Floating objects facilitate the dispersal of marine and terrestrial species but also represent a major environmental hazard in the case of anthropogenic plastic litter. They can be found throughout the world's oceans but information on their abundance and the spatio-temporal dynamics is scarce for many regions of the world. This information, however, is essential to evaluate the ecological role of floating objects. Herein, we report the results from a ship-based visual survey on the abundance and composition of flotsam in the German Bight (North Sea) during the years 2006 to 2008. The aim of this study was to identify potential sources of floating objects and to relate spatio-temporal density variations to environmental conditions. Three major flotsam categories were identified: buoyant seaweed (mainly fucoid brown algae), natural wood and anthropogenic debris. Densities of these floating objects in the German Bight were similar to those reported from other coastal regions of the world. Temporal variations in flotsam densities are probably the result of seasonal growth cycles of seaweeds and fluctuating river runoff (wood). Higher abundances were often found in areas where coastal fronts and eddies develop during calm weather conditions. Accordingly, flotsam densities were often higher in the inner German Bight than in areas farther offshore. Import of floating objects and retention times in the German Bight are influenced by wind force and direction. Our results indicate that a substantial amount of floating objects is of coastal origin or introduced into the German Bight from western source areas such as the British Channel. Rapid transport of floating objects through the German Bight is driven by strong westerly winds and likely facilitates dispersal of associated organisms and gene flow among distant populations.

  15. A spatio-temporal mining approach towards summarizing and analyzing protein folding trajectories

    Directory of Open Access Journals (Sweden)

    Ucar Duygu

    2007-04-01

    Full Text Available Abstract Understanding the protein folding mechanism remains a grand challenge in structural biology. In the past several years, computational theories in molecular dynamics have been employed to shed light on the folding process. Coupled with high computing power and large scale storage, researchers now can computationally simulate the protein folding process in atomistic details at femtosecond temporal resolution. Such simulation often produces a large number of folding trajectories, each consisting of a series of 3D conformations of the protein under study. As a result, effectively managing and analyzing such trajectories is becoming increasingly important. In this article, we present a spatio-temporal mining approach to analyze protein folding trajectories. It exploits the simplicity of contact maps, while also integrating 3D structural information in the analysis. It characterizes the dynamic folding process by first identifying spatio-temporal association patterns in contact maps, then studying how such patterns evolve along a folding trajectory. We demonstrate that such patterns can be leveraged to summarize folding trajectories, and to facilitate the detection and ordering of important folding events along a folding path. We also show that such patterns can be used to identify a consensus partial folding pathway across multiple folding trajectories. Furthermore, we argue that such patterns can capture both local and global structural topology in a 3D protein conformation, thereby facilitating effective structural comparison amongst conformations. We apply this approach to analyze the folding trajectories of two small synthetic proteins-BBA5 and GSGS (or Beta3S. We show that this approach is promising towards addressing the above issues, namely, folding trajectory summarization, folding events detection and ordering, and consensus partial folding pathway identification across trajectories.

  16. Spatio-temporal simulation of first pass drug perfusion in the liver.

    Directory of Open Access Journals (Sweden)

    Lars Ole Schwen

    2014-03-01

    Full Text Available The liver is the central organ for detoxification of xenobiotics in the body. In pharmacokinetic modeling, hepatic metabolization capacity is typically quantified as hepatic clearance computed as degradation in well-stirred compartments. This is an accurate mechanistic description once a quasi-equilibrium between blood and surrounding tissue is established. However, this model structure cannot be used to simulate spatio-temporal distribution during the first instants after drug injection. In this paper, we introduce a new spatially resolved model to simulate first pass perfusion of compounds within the naive liver. The model is based on vascular structures obtained from computed tomography as well as physiologically based mass transfer descriptions obtained from pharmacokinetic modeling. The physiological architecture of hepatic tissue in our model is governed by both vascular geometry and the composition of the connecting hepatic tissue. In particular, we here consider locally distributed mass flow in liver tissue instead of considering well-stirred compartments. Experimentally, the model structure corresponds to an isolated perfused liver and provides an ideal platform to address first pass effects and questions of hepatic heterogeneity. The model was evaluated for three exemplary compounds covering key aspects of perfusion, distribution and metabolization within the liver. As pathophysiological states we considered the influence of steatosis and carbon tetrachloride-induced liver necrosis on total hepatic distribution and metabolic capacity. Notably, we found that our computational predictions are in qualitative agreement with previously published experimental data. The simulation results provide an unprecedented level of detail in compound concentration profiles during first pass perfusion, both spatio-temporally in liver tissue itself and temporally in the outflowing blood. We expect our model to be the foundation of further spatially

  17. Spatio-temporal encoding using narrow-band linear frequency modulated signals in synthetic aperture ultrasound imaging

    DEFF Research Database (Denmark)

    Gran, Fredrik; Jensen, Jørgen Arendt

    2005-01-01

    In this paper a method for spatio-temporal encoding is presented for synthetic transmit aperture ultrasound imaging (STA). The purpose is to excite several transmitters at the same time in order to transmit more acoustic energy in every single transmission. When increasing the transmitted acoustic...

  18. An Ethnographic Case Study of Spatio-Temporal Practices Circulating On- and Off-Line in a Distance Learning Class

    Science.gov (United States)

    Kabat-Ryan, Katalin Judith

    2013-01-01

    This dissertation examines the spatio-temporal practices of a distance learning class in a graduate institution in the Northeast United States. Guided by a multispatial and temporal perspective, the case study builds on Hine's (2003) and Leander and McKim's (2003) connective ethnography of offline and online research sites, and frames the research…

  19. Structured Spatio-temporal shot-noise Cox point process models, with a view to modelling forest fires

    DEFF Research Database (Denmark)

    Møller, Jesper; Diaz-Avalos, Carlos

    2010-01-01

    Spatio-temporal Cox point process models with a multiplicative structure for the driving random intensity, incorporating covariate information into temporal and spatial components, and with a residual term modelled by a shot-noise process, are considered. Such models are flexible and tractable fo...

  20. Structured spatio-temporal shot-noise Cox point process models, with a view to modelling forest fires

    DEFF Research Database (Denmark)

    Møller, Jesper; Diaz-Avalos, Carlos

    Spatio-temporal Cox point process models with a multiplicative structure for the driving random intensity, incorporating covariate information into temporal and spatial components, and with a residual term modelled by a shot-noise process, are considered. Such models are flexible and tractable fo...

  1. Assessing spatio-temporal variability and trends in modelled and measured Greenland Ice Sheet albedo (2000-2013)

    NARCIS (Netherlands)

    Alexander, P. M.; Tedesco, M.; Fettweis, X.; Van De Wal, R. S W; Smeets, C. J P P; Van Den Broeke, M. R.

    2014-01-01

    Accurate measurements and simulations of Greenland Ice Sheet (GrIS) surface albedo are essential, given the role of surface albedo in modulating the amount of absorbed solar radiation and meltwater production. In this study, we assess the spatio-temporal variability of GrIS albedo during June, July,

  2. Quantifying relative fishing impact on fish populations based on spatio-temporal overlap of fishing effort and stock density

    DEFF Research Database (Denmark)

    Vinther, Morten; Eero, Margit

    2013-01-01

    GAM analyses to predict local cod densities and combine this with spatio-temporal data of fishing effort based on VMS (Vessel Monitoring System). To quantify local fishing impact on the stock, retention probability of the gears is taken into account. The results indicate a substantial decline...

  3. Spatio-temporal microseismic analysis of the Woodford Shale, Canadian County, Oklahoma

    Science.gov (United States)

    Eppehimer, Jarred

    Microseismicity provides data that can be used to monitor hydraulic fracture stimulation programs as well as to characterize the resulting hydraulic fractures. This is especially important in low permeability gas and oil shales, where the creation of additional permeability through these fracture treatments is essential to production. However, many applications and analyses of these data are either qualitative in nature or include a large element of interpretational bias. This study looks at two microseismic analytical techniques: the radius of gyration (ROG) tensor, as described in Sayers & Le Calvez (2010), and the methods described in Shapiro (2008) that relate spatio-temporal microseismic signatures to hydraulic diffusivity and ultimately hydraulic permeability. The radius of gyration tensor is used to generate a characteristic ellipsoid for any set of microseismic events, and the aspect ratio of this ellipsoid can be related to local in-situ horizontal stress ratios. These methods are applied to surface microseismic data collected for six horizontal wells drilled and completed in the Woodford Shale in Canadian County, Oklahoma. Additionally, an attempt is made to bridge the gap between these methods. Specifically, the characteristic ellipsoid generation from the radius of gyration tensor in Sayers & Le Calvez (2010) is applied to Shapiro's workflow. Shapiro attempts to link the 3D anisotropic triggering front of seismicity, which is an ellipsoid that envelops time-scaled microseismic events, to reservoir permeability. The radius of gyration tensor will generate this ellipsoid and remove interpretational bias that would have been present otherwise. Lastly, an attempt is made at relating the signatures present in the characteristic ellipsoids to zones of natural fracture reactivation. This is done on a stage-by-stage basis. The hypothesis is that an ellipsoid with a significant tilt in its most vertical principal axis and a significant azimuthal rotation away

  4. Design of switched-capacitor filter circuits using low gain amplifiers

    CERN Document Server

    Serra, Hugo Alexandre de Andrade

    2015-01-01

    This book describes the design of switched-capacitor filter circuits using low gain amplifiers and demonstrates some techniques that can minimize the effects of parasitic capacitances during the design phase. Focus is given in the design of low-pass and band-pass SC filters, and how higher order filters can be achieved using cascaded biquadratic filter sections. The authors also describe a low voltage implementation of a low-pass SC filter.

  5. Big Data GPU-Driven Parallel Processing Spatial and Spatio-Temporal Clustering Algorithms

    Science.gov (United States)

    Konstantaras, Antonios; Skounakis, Emmanouil; Kilty, James-Alexander; Frantzeskakis, Theofanis; Maravelakis, Emmanuel

    2016-04-01

    Advances in graphics processing units' technology towards encompassing parallel architectures [1], comprised of thousands of cores and multiples of parallel threads, provide the foundation in terms of hardware for the rapid processing of various parallel applications regarding seismic big data analysis. Seismic data are normally stored as collections of vectors in massive matrices, growing rapidly in size as wider areas are covered, denser recording networks are being established and decades of data are being compiled together [2]. Yet, many processes regarding seismic data analysis are performed on each seismic event independently or as distinct tiles [3] of specific grouped seismic events within a much larger data set. Such processes, independent of one another can be performed in parallel narrowing down processing times drastically [1,3]. This research work presents the development and implementation of three parallel processing algorithms using Cuda C [4] for the investigation of potentially distinct seismic regions [5,6] present in the vicinity of the southern Hellenic seismic arc. The algorithms, programmed and executed in parallel comparatively, are the: fuzzy k-means clustering with expert knowledge [7] in assigning overall clusters' number; density-based clustering [8]; and a selves-developed spatio-temporal clustering algorithm encompassing expert [9] and empirical knowledge [10] for the specific area under investigation. Indexing terms: GPU parallel programming, Cuda C, heterogeneous processing, distinct seismic regions, parallel clustering algorithms, spatio-temporal clustering References [1] Kirk, D. and Hwu, W.: 'Programming massively parallel processors - A hands-on approach', 2nd Edition, Morgan Kaufman Publisher, 2013 [2] Konstantaras, A., Valianatos, F., Varley, M.R. and Makris, J.P.: 'Soft-Computing Modelling of Seismicity in the Southern Hellenic Arc', Geoscience and Remote Sensing Letters, vol. 5 (3), pp. 323-327, 2008 [3] Papadakis, S. and

  6. Automated Spatio-Temporal Analysis of Remotely Sensed Imagery for Water Resources Management

    Science.gov (United States)

    Bahr, Thomas

    2016-04-01

    Since 2012, the state of California faces an extreme drought, which impacts water supply in many ways. Advanced remote sensing is an important technology to better assess water resources, monitor drought conditions and water supplies, plan for drought response and mitigation, and measure drought impacts. In the present case study latest time series analysis capabilities are used to examine surface water in reservoirs located along the western flank of the Sierra Nevada region of California. This case study was performed using the COTS software package ENVI 5.3. Integration of custom processes and automation is supported by IDL (Interactive Data Language). Thus, ENVI analytics is running via the object-oriented and IDL-based ENVITask API. A time series from Landsat images (L-5 TM, L-7 ETM+, L-8 OLI) of the AOI was obtained for 1999 to 2015 (October acquisitions). Downloaded from the USGS EarthExplorer web site, they already were georeferenced to a UTM Zone 10N (WGS-84) coordinate system. ENVITasks were used to pre-process the Landsat images as follows: • Triangulation based gap-filling for the SLC-off Landsat-7 ETM+ images. • Spatial subsetting to the same geographic extent. • Radiometric correction to top-of-atmosphere (TOA) reflectance. • Atmospheric correction using QUAC®, which determines atmospheric correction parameters directly from the observed pixel spectra in a scene, without ancillary information. Spatio-temporal analysis was executed with the following tasks: • Creation of Modified Normalized Difference Water Index images (MNDWI, Xu 2006) to enhance open water features while suppressing noise from built-up land, vegetation, and soil. • Threshold based classification of the water index images to extract the water features. • Classification aggregation as a post-classification cleanup process. • Export of the respective water classes to vector layers for further evaluation in a GIS. • Animation of the classification series and export to

  7. On the spatio-temporal analysis of hydrological droughts from global hydrological models

    Directory of Open Access Journals (Sweden)

    G. A. Corzo Perez

    2011-09-01

    Full Text Available The recent concerns for world-wide extreme events related to climate change have motivated the development of large scale models that simulate the global water cycle. In this context, analysis of hydrological extremes is important and requires the adaptation of identification methods used for river basin models. This paper presents two methodologies that extend the tools to analyze spatio-temporal drought development and characteristics using large scale gridded time series of hydrometeorological data. The methodologies are classified as non-contiguous and contiguous drought area analyses (i.e. NCDA and CDA. The NCDA presents time series of percentages of areas in drought at the global scale and for pre-defined regions of known hydroclimatology. The CDA is introduced as a complementary method that generates information on the spatial coherence of drought events at the global scale. Spatial drought events are found through CDA by clustering patterns (contiguous areas. In this study the global hydrological model WaterGAP was used to illustrate the methodology development. Global gridded time series of subsurface runoff (resolution 0.5° simulated with the WaterGAP model from land points were used. The NCDA and CDA were developed to identify drought events in runoff. The percentages of area in drought calculated with both methods show complementary information on the spatial and temporal events for the last decades of the 20th century. The NCDA provides relevant information on the average number of droughts, duration and severity (deficit volume for pre-defined regions (globe, 2 selected hydroclimatic regions. Additionally, the CDA provides information on the number of spatially linked areas in drought, maximum spatial event and their geographic location on the globe. Some results capture the overall spatio-temporal drought extremes over the last decades of the 20th century. Events like the El Niño Southern Oscillation (ENSO in South America and

  8. Spatio-temporal analysis of smear-positive tuberculosis in the Sidama Zone, southern Ethiopia.

    Directory of Open Access Journals (Sweden)

    Mesay Hailu Dangisso

    Full Text Available Tuberculosis (TB is a disease of public health concern, with a varying distribution across settings depending on socio-economic status, HIV burden, availability and performance of the health system. Ethiopia is a country with a high burden of TB, with regional variations in TB case notification rates (CNRs. However, TB program reports are often compiled and reported at higher administrative units that do not show the burden at lower units, so there is limited information about the spatial distribution of the disease. We therefore aim to assess the spatial distribution and presence of the spatio-temporal clustering of the disease in different geographic settings over 10 years in the Sidama Zone in southern Ethiopia.A retrospective space-time and spatial analysis were carried out at the kebele level (the lowest administrative unit within a district to identify spatial and space-time clusters of smear-positive pulmonary TB (PTB. Scan statistics, Global Moran's I, and Getis and Ordi (Gi* statistics were all used to help analyze the spatial distribution and clusters of the disease across settings.A total of 22,545 smear-positive PTB cases notified over 10 years were used for spatial analysis. In a purely spatial analysis, we identified the most likely cluster of smear-positive PTB in 192 kebeles in eight districts (RR= 2, p<0.001, with 12,155 observed and 8,668 expected cases. The Gi* statistic also identified the clusters in the same areas, and the spatial clusters showed stability in most areas in each year during the study period. The space-time analysis also detected the most likely cluster in 193 kebeles in the same eight districts (RR= 1.92, p<0.001, with 7,584 observed and 4,738 expected cases in 2003-2012.The study found variations in CNRs and significant spatio-temporal clusters of smear-positive PTB in the Sidama Zone. The findings can be used to guide TB control programs to devise effective TB control strategies for the geographic areas

  9. Classification of motor intent in transradial amputees using sonomyography and spatio-temporal image analysis

    Science.gov (United States)

    Hariharan, Harishwaran; Aklaghi, Nima; Baker, Clayton A.; Rangwala, Huzefa; Kosecka, Jana; Sikdar, Siddhartha

    2016-04-01

    In spite of major advances in biomechanical design of upper extremity prosthetics, these devices continue to lack intuitive control. Conventional myoelectric control strategies typically utilize electromyography (EMG) signal amplitude sensed from forearm muscles. EMG has limited specificity in resolving deep muscle activity and poor signal-to-noise ratio. We have been investigating alternative control strategies that rely on real-time ultrasound imaging that can overcome many of the limitations of EMG. In this work, we present an ultrasound image sequence classification method that utilizes spatiotemporal features to describe muscle activity and classify motor intent. Ultrasound images of the forearm muscles were obtained from able-bodied subjects and a trans-radial amputee while they attempted different hand movements. A grid-based approach is used to test the feasibility of using spatio-temporal features by classifying hand motions performed by the subjects. Using the leave-one-out cross validation on image sequences acquired from able-bodied subjects, we observe that the grid-based approach is able to discern four hand motions with 95.31% accuracy. In case of the trans-radial amputee, we are able to discern three hand motions with 80% accuracy. In a second set of experiments, we study classification accuracy by extracting spatio-temporal sub-sequences the depict activity due to the motion of local anatomical interfaces. Short time and space limited cuboidal sequences are initially extracted and assigned an optical flow behavior label, based on a response function. The image space is clustered based on the location of cuboids and features calculated from the cuboids in each cluster. Using sequences of known motions, we extract feature vectors that describe said motion. A K-nearest neighbor classifier is designed for classification experiments. Using the leave-one-out cross validation on image sequences for an amputee subject, we demonstrate that the classifier is

  10. On the spatio-temporal analysis of hydrological droughts from global hydrological models

    Directory of Open Access Journals (Sweden)

    G. A. Corzo Perez

    2011-01-01

    Full Text Available The recent concerns for world-wide extreme events related to climate change phenomena have motivated the development of large scale models that simulate the global water cycle. In this context, analyses of extremes is an important topic that requires the adaptation of methods used for river basin and regional scale models. This paper presents two methodologies that extend the tools to analyze spatio-temporal drought development and characteristics using large scale gridded time series of hydrometeorological data. The methodologies are distinguished and defined as non-contiguous and contiguous drought area analyses (i.e. NCDA and CDA. The NCDA presents time series of percentages of areas in drought at the global scale and for pre-defined regions of known hydroclimatology. The CDA is introduced as a complementary method that generates information on the spatial coherence of drought events at the global scale. Spatial drought events are found through CDA by clustering patterns (contiguous areas. In this study the global hydrological model WaterGAP was used to illustrate the methodology development. Global gridded time series (resolution 0.5° simulated with the WaterGAP model from land points were used. The NCDA and CDA were applied to identify drought events in subsurface runoff. The percentages of area in drought calculated with both methods show complementary information on the spatial and temporal events for the last decades of the 20th century. The NCDA provides relevant information on the average number of droughts, duration and severity (deficit volume for pre-defined regions (globe, 2 selected climate regions. Additionally, the CDA provides information on the number of spatially linked areas in drought as well as their geographic location on the globe. An explorative validation process shows that the NCDA results capture the overall spatio-temporal drought extremes over the last decades of the 20th century. Events like the El Niño Southern

  11. Spatio-temporal tracking and phylodynamics of an urban dengue 3 outbreak in Sao Paulo, Brazil.

    Directory of Open Access Journals (Sweden)

    Adriano Mondini

    Full Text Available The dengue virus has a single-stranded positive-sense RNA genome of approximately 10.700 nucleotides with a single open reading frame that encodes three structural (C, prM, and E and seven nonstructural (NS1, NS2A, NS2B, NS3, NS4A, NS4B, and NS5 proteins. It possesses four antigenically distinct serotypes (DENV 1-4. Many phylogenetic studies address particularities of the different serotypes using convenience samples that are not conducive to a spatio-temporal analysis in a single urban setting. We describe the pattern of spread of distinct lineages of DENV-3 circulating in São José do Rio Preto, Brazil, during 2006. Blood samples from patients presenting dengue-like symptoms were collected for DENV testing. We performed M-N-PCR using primers based on NS5 for virus detection and identification. The fragments were purified from PCR mixtures and sequenced. The positive dengue cases were geo-coded. To type the sequenced samples, 52 reference sequences were aligned. The dataset generated was used for iterative phylogenetic reconstruction with the maximum likelihood criterion. The best demographic model, the rate of growth, rate of evolutionary change, and Time to Most Recent Common Ancestor (TMRCA were estimated. The basic reproductive rate during the epidemics was estimated. We obtained sequences from 82 patients among 174 blood samples. We were able to geo-code 46 sequences. The alignment generated a 399-nucleotide-long dataset with 134 taxa. The phylogenetic analysis indicated that all samples were of DENV-3 and related to strains circulating on the isle of Martinique in 2000-2001. Sixty DENV-3 from São José do Rio Preto formed a monophyletic group (lineage 1, closely related to the remaining 22 isolates (lineage 2. We assumed that these lineages appeared before 2006 in different occasions. By transforming the inferred exponential growth rates into the basic reproductive rate, we obtained values for lineage 1 of R(0 = 1.53 and values for

  12. Dying like rabbits: general determinants of spatio-temporal variability in survival.

    Science.gov (United States)

    Tablado, Zulima; Revilla, Eloy; Palomares, Francisco

    2012-01-01

    1. Identifying general patterns of how and why survival rates vary across space and time is necessary to truly understand population dynamics of a species. However, this is not an easy task given the complexity and interactions of processes involved, and the interpopulation differences in main survival determinants. 2. Here, using European rabbits (Oryctolagus cuniculus) as a model and information from local studies, we investigated whether we could make inferences about trends and drivers of survival of a species that are generalizable to large spatio-temporal scales. To do this, we first focused on overall survival and then examined cause-specific mortalities, mainly predation and diseases, which may lead to those patterns. 3. Our results show that within the large-scale variability in rabbit survival, there exist general patterns that are explained by the integration of factors previously known to be important at the local level (i.e. age, climate, diseases, predation or density dependence). We found that both inter- and intrastudy survival rates increased in magnitude and decreased in variability as rabbits grow old, although this tendency was less pronounced in populations with epidemic diseases. Some causes leading to these higher mortalities in young rabbits could be the stronger effect of rainfall at those ages, as well as, other death sources like malnutrition or infanticide. 4. Predation is also greater for newborns and juveniles, especially in population without diseases. Apart from the effect of diseases, predation patterns also depended on factors, such as, density, season, and type and density of predators. Finally, we observed that infectious diseases also showed general relationships with climate, breeding (i.e. new susceptible rabbits) and age, although the association type varied between myxomatosis and rabbit haemorrhagic disease. 5. In conclusion, large-scale patterns of spatio-temporal variability in rabbit survival emerge from the combination

  13. Simulating Future Changes in Spatio-temporal Precipitation by Identifying and Characterizing Individual Rainstorm Events

    Science.gov (United States)

    Chang, W.; Stein, M.; Wang, J.; Kotamarthi, V. R.; Moyer, E. J.

    2015-12-01

    A growing body of literature suggests that human-induced climate change may cause significant changes in precipitation patterns, which could in turn influence future flood levels and frequencies and water supply and management practices. Although climate models produce full three-dimensional simulations of precipitation, analyses of model precipitation have focused either on time-averaged distributions or on individual timeseries with no spatial information. We describe here a new approach based on identifying and characterizing individual rainstorms in either data or model output. Our approach enables us to readily characterize important spatio-temporal aspects of rainstorms including initiation location, intensity (mean and patterns), spatial extent, duration, and trajectory. We apply this technique to high-resolution precipitation over the continental U.S. both from radar-based observations (NCEP Stage IV QPE product, 1-hourly, 4 km spatial resolution) and from model runs with dynamical downscaling (WRF regional climate model, 3-hourly, 12 km spatial resolution). In the model studies we investigate the changes in storm characteristics under a business-as-usual warming scenario to 2100 (RCP 8.5). We find that in these model runs, rainstorm intensity increases as expected with rising temperatures (approximately 7%/K, following increased atmospheric moisture content), while total precipitation increases by a lesser amount (3%/K), consistent with other studies. We identify for the first time the necessary compensating mechanism: in these model runs, individual precipitation events become smaller. Other aspects are approximately unchanged in the warmer climate. Because these spatio-temporal changes in rainfall patterns would impact regional hydrology, it is important that they be accurately incorporated into any impacts assessment. For this purpose we have developed a methodology for producing scenarios of future precipitation that combine observational data and

  14. Zebrafish: an exciting model for investigating the spatio-temporal pattern of enteric nervous system development.

    LENUS (Irish Health Repository)

    Doodnath, Reshma

    2012-02-01

    AIM: Recently, the zebrafish (Danio rerio) has been shown to be an excellent model for human paediatric research. Advantages over other models include its small size, externally visually accessible development and ease of experimental manipulation. The enteric nervous system (ENS) consists of neurons and enteric glia. Glial cells permit cell bodies and processes of neurons to be arranged and maintained in a proper spatial arrangement, and are essential in the maintenance of basic physiological functions of neurons. Glial fibrillary acidic protein (GFAP) is expressed in astrocytes, but also expressed outside of the central nervous system. The aim of this study was to investigate the spatio-temporal pattern of GFAP expression in developing zebrafish ENS from 24 h post-fertilization (hpf), using transgenic fish that express green fluorescent protein (GFP). METHODS: Zebrafish embryos were collected from transgenic GFP Tg(GFAP:GFP)(mi2001) adult zebrafish from 24 to 120 hpf, fixed and processed for whole mount immunohistochemistry. Antibodies to Phox2b were used to identify enteric neurons. Specimens were mounted on slides and imaging was performed using a fluorescent laser confocal microscope. RESULTS: GFAP:GFP labelling outside the spinal cord was identified in embryos from 48 hpf. The patterning was intracellular and consisted of elongated profiles that appeared to migrate away from the spinal cord into the periphery. At 72 and 96 hpf, GFAP:GFP was expressed dorsally and ventrally to the intestinal tract. At 120 hpf, GFAP:GFP was expressed throughout the intestinal wall, and clusters of enteric neurons were identified using Phox2b immunofluorescence along the pathway of GFAP:GFP positive processes, indicative of a migratory pathway of ENS precursors from the spinal cord into the intestine. CONCLUSION: The pattern of migration of GFAP:GFP expressing cells outside the spinal cord suggests an organized, early developing migratory pathway to the ENS. This shows for the

  15. Somatic growth dynamics of West Atlantic hawksbill sea turtles: a spatio-temporal perspective

    Science.gov (United States)

    Bjorndal, Karen A.; Chaloupka, Milani; Saba, Vincent S.; Diez, Carlos E.; van Dam, Robert P.; Krueger, Barry H.; Horrocks, Julia A.; Santos, Armando J. B.; Bellini, Cláudio; Marcovaldi, Maria A. G.; Nava, Mabel; Willis, Sue; Godley, Brendan J.; Gore, Shannon; Hawkes, Lucy A.; McGowan, Andrew; Witt, Matthew J.; Stringell, Thomas B.; Sanghera, Amdeep; Richardson, Peter B.; Broderick, Annette C.; Phillips, Quinton; Calosso, Marta C.; Claydon, John A. B.; Blumenthal, Janice; Moncada, Felix; Nodarse, Gonzalo; Medina, Yosvani; Dunbar, Stephen G.; Wood, Lawrence D.; Lagueux, Cynthia J.; Campbell, Cathi L.; Meylan, Anne B.; Meylan, Peter A.; Burns Perez, Virginia R.; Coleman, Robin A.; Strindberg, Samantha; Guzmán-H, Vicente; Hart, Kristen M.; Cherkiss, Michael S.; Hillis-Starr, Zandy; Lundgren, Ian; Boulon, Ralf H.; Connett, Stephen; Outerbridge, Mark E.; Bolten, Alan B.

    2016-01-01

    Somatic growth dynamics are an integrated response to environmental conditions. Hawksbill sea turtles (Eretmochelys imbricata) are long-lived, major consumers in coral reef habitats that move over broad geographic areas (hundreds to thousands of kilometers). We evaluated spatio-temporal effects on hawksbill growth dynamics over a 33-yr period and 24 study sites throughout the West Atlantic and explored relationships between growth dynamics and climate indices. We compiled the largest ever data set on somatic growth rates for hawksbills – 3541 growth increments from 1980 to 2013. Using generalized additive mixed model analyses, we evaluated 10 covariates, including spatial and temporal variation, that could affect growth rates. Growth rates throughout the region responded similarly over space and time. The lack of a spatial effect or spatio-temporal interaction and the very strong temporal effect reveal that growth rates in West Atlantic hawksbills are likely driven by region-wide forces. Between 1997 and 2013, mean growth rates declined significantly and steadily by 18%. Regional climate indices have significant relationships with annual growth rates with 0- or 1-yr lags: positive with the Multivariate El Niño Southern Oscillation Index (correlation = 0.99) and negative with Caribbean sea surface temperature (correlation = −0.85). Declines in growth rates between 1997 and 2013 throughout the West Atlantic most likely resulted from warming waters through indirect negative effects on foraging resources of hawksbills. These climatic influences are complex. With increasing temperatures, trajectories of decline of coral cover and availability in reef habitats of major prey species of hawksbills are not parallel. Knowledge of how choice of foraging habitats, prey selection, and prey abundance are affected by warming water temperatures is needed to understand how climate change will affect productivity of consumers that live in association with coral reefs. Main

  16. Using Unmanned Aerial Vehicle (UAV) for spatio-temporal monitoring of soil erosion and roughness in Chania, Crete, Greece

    Science.gov (United States)

    Alexakis, Dimitrios; Seiradakis, Kostas; Tsanis, Ioannis

    2016-04-01

    This article presents a remote sensing approach for spatio-temporal monitoring of both soil erosion and roughness using an Unmanned Aerial Vehicle (UAV). Soil erosion by water is commonly known as one of the main reasons for land degradation. Gully erosion causes considerable soil loss and soil degradation. Furthermore, quantification of soil roughness (irregularities of the soil surface due to soil texture) is important and affects surface storage and infiltration. Soil roughness is one of the most susceptible to variation in time and space characteristics and depends on different parameters such as cultivation practices and soil aggregation. A UAV equipped with a digital camera was employed to monitor soil in terms of erosion and roughness in two different study areas in Chania, Crete, Greece. The UAV followed predicted flight paths computed by the relevant flight planning software. The photogrammetric image processing enabled the development of sophisticated Digital Terrain Models (DTMs) and ortho-image mosaics with very high resolution on a sub-decimeter level. The DTMs were developed using photogrammetric processing of more than 500 images acquired with the UAV from different heights above the ground level. As the geomorphic formations can be observed from above using UAVs, shadowing effects do not generally occur and the generated point clouds have very homogeneous and high point densities. The DTMs generated from UAV were compared in terms of vertical absolute accuracies with a Global Navigation Satellite System (GNSS) survey. The developed data products were used for quantifying gully erosion and soil roughness in 3D as well as for the analysis of the surrounding areas. The significant elevation changes from multi-temporal UAV elevation data were used for estimating diachronically soil loss and sediment delivery without installing sediment traps. Concerning roughness, statistical indicators of surface elevation point measurements were estimated and various

  17. Spatio-temporal spike train analysis for large scale networks using the maximum entropy principle and Monte Carlo method

    International Nuclear Information System (INIS)

    Understanding the dynamics of neural networks is a major challenge in experimental neuroscience. For that purpose, a modelling of the recorded activity that reproduces the main statistics of the data is required. In the first part, we present a review on recent results dealing with spike train statistics analysis using maximum entropy models (MaxEnt). Most of these studies have focused on modelling synchronous spike patterns, leaving aside the temporal dynamics of the neural activity. However, the maximum entropy principle can be generalized to the temporal case, leading to Markovian models where memory effects and time correlations in the dynamics are properly taken into account. In the second part, we present a new method based on Monte Carlo sampling which is suited for the fitting of large-scale spatio-temporal MaxEnt models. The formalism and the tools presented here will be essential to fit MaxEnt spatio-temporal models to large neural ensembles. (paper)

  18. Compressing an Ensemble with Statistical Models: An Algorithm for Global 3D Spatio-Temporal Temperature

    KAUST Repository

    Castruccio, Stefano

    2015-04-02

    One of the main challenges when working with modern climate model ensembles is the increasingly larger size of the data produced, and the consequent difficulty in storing large amounts of spatio-temporally resolved information. Many compression algorithms can be used to mitigate this problem, but since they are designed to compress generic scientific data sets, they do not account for the nature of climate model output and they compress only individual simulations. In this work, we propose a different, statistics-based approach that explicitly accounts for the space-time dependence of the data for annual global three-dimensional temperature fields in an initial condition ensemble. The set of estimated parameters is small (compared to the data size) and can be regarded as a summary of the essential structure of the ensemble output; therefore, it can be used to instantaneously reproduce the temperature fields in an ensemble with a substantial saving in storage and time. The statistical model exploits the gridded geometry of the data and parallelization across processors. It is therefore computationally convenient and allows to fit a non-trivial model to a data set of one billion data points with a covariance matrix comprising of 10^18 entries.

  19. Spatio-temporal analysis of potential aquifer recharge: Application to the Basin of Mexico

    Science.gov (United States)

    Carrera-Hernández, J. J.; Gaskin, S. J.

    2008-05-01

    SummaryRegional estimates of aquifer recharge are needed in data-scarce regions such as the Basin of Mexico, where nearly 20 million people are located and where the Basin's aquifer system represents the main water source. In order to develop the spatio-temporal estimates of aquifer recharge and to analyze to what extent urban growth has affected aquifer recharge, this work presents a daily soil water balance which uses different vegetation and soil types as well as the effect of topography on climatological variables and evapotranspiration. The soil water balance was applied on a daily time step in the Basin of Mexico for the period 1975-1986, obtaining an annually-lumped potential recharge flow of 10.9-23.8 m 3/s (35.9-78.1 mm) in the entire Basin, while the monthly values for the year with the largest lumped recharge value (1981 = 78.1 mm) range from 1 m 3/s (0.3 mm) in December to 87.9 m 3/s (23.7 mm) in June. As aquifer recharge in the Basin mainly occurs by subsurface flow from its enclosing mountains as Mountain Block Recharge, urban growth has had a minimal impact on aquifer recharge, although it has diminished recharge in the alluvial plain.

  20. ANALISIS KETERKAITAN PERUBAHAN LAHAN PERTANIAN TERHADAP KETAHANAN PANGAN KABUPATEN MAGELANG BERBASIS MODEL SPATIO TEMPORAL SIG

    Directory of Open Access Journals (Sweden)

    Rifki Destianto

    2014-04-01

    Full Text Available As mandated by the 1945 Constitution of the Republic of Indonesia, agricultural land is part of the earth as a gift from God that is controlled by the state and utilized for the prosperity and welfare of the people. The agricultural land can provide great benefits in terms of economic, social, and environmental benefits. Land use conversion from agricultural to non-agricultural use can cause productivity decrease in agriculture, so it triggers a hypothesis that the decrease of agricultural land will negatively affect food security. Based on the problem, the research is conducted to assess the relationship between conversion in agricultural land use with food security using a case study of Magelang Regency (Kabupaten in the 2009-11 period. The methods used are spatio-temporal GIS, quantitative analysis, and field calibration. The results have shown that the agricultural land area has decreased (6.31% but the food security has not declined. It is because the food sources for Magelang Regency come from several adjacent areas. It can then be concluded that the reduction of agricultural land does not significantly affect the food security status of the study area. However, in the long run the decrease of the agricultural land will affect national food security. So, to maintain food security, agricultural land use control is necessary to prevent the unnecessary conversion of agricultural land.

  1. Mapping the spatio-temporal risk of lead exposure in apex species for more effective mitigation.

    Science.gov (United States)

    Mateo-Tomás, Patricia; Olea, Pedro P; Jiménez-Moreno, María; Camarero, Pablo R; Sánchez-Barbudo, Inés S; Rodríguez Martín-Doimeadios, Rosa C; Mateo, Rafael

    2016-07-27

    Effective mitigation of the risks posed by environmental contaminants for ecosystem integrity and human health requires knowing their sources and spatio-temporal distribution. We analysed the exposure to lead (Pb) in griffon vulture Gyps fulvus-an apex species valuable as biomonitoring sentinel. We determined vultures' lead exposure and its main sources by combining isotope signatures and modelling analyses of 691 bird blood samples collected over 5 years. We made yearlong spatially explicit predictions of the species risk of lead exposure. Our results highlight elevated lead exposure of griffon vultures (i.e. 44.9% of the studied population, approximately 15% of the European, showed lead blood levels more than 200 ng ml(-1)) partly owing to environmental lead (e.g. geological sources). These exposures to environmental lead of geological sources increased in those vultures exposed to point sources (e.g. lead-based ammunition). These spatial models and pollutant risk maps are powerful tools that identify areas of wildlife exposure to potentially harmful sources of lead that could affect ecosystem and human health. PMID:27466455

  2. Real-Time Intensity Domain Characterization of Fibre Lasers Using Spatio-Temporal Dynamics

    Directory of Open Access Journals (Sweden)

    Srikanth Sugavanam

    2016-02-01

    Full Text Available Fibre lasers are light sources that are synonymous with stability. They can give rise to highly coherent continuous-wave radiation, or a stable train of mode locked pulses with well-defined characteristics. However, they can also exhibit an exceedingly diverse range of nonlinear operational regimes spanning a multi-dimensional parameter space. The complex nature of the dynamics poses significant challenges in the theoretical and experimental studies of such systems. Here, we demonstrate how the real-time experimental methodology of spatio-temporal dynamics can be used to unambiguously identify and discern between such highly complex lasing regimes. This two-dimensional representation of laser intensity allows the identification and tracking of individual features embedded in the radiation as they make round-trip circulations inside the cavity. The salient features of this methodology are highlighted by its application to the case of Raman fibre lasers and a partially mode locked ring fibre laser operating in the normal dispersion regime.

  3. A comparison of predictive soil-carbon models across multiple spatio-temporal catchment scales.

    Science.gov (United States)

    Hancock, G. R.; Kunkel, V.; Wells, T.

    2014-12-01

    Soil's potential as a carbon sink for atmospheric CO2 has been widely discussed. Studies of soil organic carbon (SOC) controls, and the subsequent models derived from their findings, have focussed mainly on North American and European regions, and more recently, in regions such as China. In Australia, agricultural practices have led to losses in SOC. This implies that Australian soils have a large potential for increases in SOC. Building on previous work, here we examine the spatial and temporal variation in soil organic carbon (SOC) and its controlling factors controls across a large catchment of approximately 600 km2 in the Upper Hunter Valley, New South Wales, Australia, using data collected from two sampling campaigns, (April 2006 and June-July 2014). Remote sensing using Landsat (30m) and MODIS (250m) NDVI was used to determine if catchment SOC could be predicted using both low and high resolution remote sensing . Relationships between SOC and elevation, aboveground biomass (as represented by NDVI), topographic wetness index (TWI), and incident solar radiation as a surrogate for soil temperature were compared. Initial results demonstrate that higher spatio-temporal resolution may not be necessary for predicting SOC at larger scales. The relationship between SOC and the environmental tracer 137-Cesium as a surrogate for the loss of SOC by erosion also suggests that sediment transport and deposition influences the distribution of SOC. A model developed for the site suggests that simple linear relationships between vegetation, climate and sediment transport could improve SOC predictions.

  4. Robust spatio-temporal registration of 4D cardiac ultrasound sequences

    Science.gov (United States)

    Bersvendsen, Jørn; Toews, Matthew; Danudibroto, Adriyana; Wells, William M.; Urheim, Stig; Estépar, Raúl San José; Samset, Eigil

    2016-04-01

    Registration of multiple 3D ultrasound sectors in order to provide an extended field of view is important for the appreciation of larger anatomical structures at high spatial and temporal resolution. In this paper, we present a method for fully automatic spatio-temporal registration between two partially overlapping 3D ultrasound sequences. The temporal alignment is solved by aligning the normalized cross correlation-over-time curves of the sequences. For the spatial alignment, corresponding 3D Scale Invariant Feature Transform (SIFT) features are extracted from all frames of both sequences independently of the temporal alignment. A rigid transform is then calculated by least squares minimization in combination with random sample consensus. The method is applied to 16 echocardiographic sequences of the left and right ventricles and evaluated against manually annotated temporal events and spatial anatomical landmarks. The mean distances between manually identified landmarks in the left and right ventricles after automatic registration were (mean+/-SD) 4.3+/-1.2 mm compared to a reference error of 2.8 +/- 0.6 mm with manual registration. For the temporal alignment, the absolute errors in valvular event times were 14.4 +/- 11.6 ms for Aortic Valve (AV) opening, 18.6 +/- 16.0 ms for AV closing, and 34.6 +/- 26.4 ms for mitral valve opening, compared to a mean inter-frame time of 29 ms.

  5. The spatio-temporal strain response of oedematous and nonoedematous tissue to sustained compression in vivo.

    Science.gov (United States)

    Berry, Gearóid P; Bamber, Jeffrey C; Mortimer, Peter S; Bush, Nigel L; Miller, Naomi R; Barbone, Paul E

    2008-04-01

    Poroelastic theory predicts that compression-induced fluid flow through a medium reveals itself via the spatio-temporal behaviour of the strain field. Such strain behaviour has already been observed in simple poroelastic phantoms using generalised elastographic techniques (Berry et al. 2006a, 2006b). The aim of this current study was to investigate the extent to which these techniques could be applied in vivo to image and interpret the compression-induced time-dependent local strain response in soft tissue. Tissue on both arms of six patients presenting with unilateral lymphoedema was subjected to a sustained compression for up to 500 s, and the induced strain was imaged as a function of time. The strain was found to exhibit time-dependent spatially varying behaviour, which we interpret to be consistent with that of a heterogeneous poroelastic material. This occurred in both arms of all patients, although it was more easily seen in the ipsilateral (affected) arm than in the contralateral (apparently unaffected) arm in five out of the six patients. Further work would appear to be worthwhile to determine if poroelasticity imaging could be used in future both to diagnose lymphoedema and to explore the patho-physiology of the condition. PMID:18222033

  6. Spatio-temporal dynamics of sources of hard X-ray pulsations in solar flares

    CERN Document Server

    Kuznetsov, S A; Morgachev, A S; Struminsky, A B

    2016-01-01

    We present systematic analysis of spatio-temporal evolution of sources of hard X-ray (HXR) pulsations in solar flares. We concentrate on disk flares whose impulsive phase are accompanied by a series of more than three peaks (pulsations) of HXR emission detected in the RHESSI 50-100 keV channel with 4-second cadence. 29 such flares observed from February 2002 to June 2015 with time differences between successive peaks of 8-270 s are studied. The main observational result is that sources of HXR pulsations in all flares are not stationary, they demonstrate apparent displacements from pulsation to pulsation. The flares can be subdivided into two groups depending on character of dynamics of HXR sources. The group-1 consists of 16 flares (55%) with systematic dynamics of HXR sources from pulsation to pulsation with respect to a magnetic polarity inversion line (MPIL), which has simple extended trace on the photosphere. The group-2 consists of 13 flares (45%) with more chaotic displacements of HXR sources with respe...

  7. Control and characterization of spatio-temporal disorder in parametrically excited surface waves

    Indian Academy of Sciences (India)

    T Epsteing; J Fineberg

    2005-06-01

    The nonlinear interactions of parametrically excited surface waves have been shown to yield a rich family of nonlinear states. When the system is driven by two commensurate frequencies, a variety of interesting superlattice type states are generated via a number of different 3-wave resonant interactions. These states occur either as symmetry-breaking bifurcations of hexagonal patterns composed of a single unstable mode or via nonlinear interactions between the two different unstable modes generated by the two forcing frequencies. Near the system’s bicritical point, a well-defined region of phase space exists in which a highly disordered state, both in space and time, is observed. We first show that this state results from the competition between two distinct nonlinear superlattice states, each with different characteristic temporal and spatial symmetries. After characterizing the type of spatio-temporal disorder that is embodied in this disordered state, we will demonstrate that it can be controlled. Control to either of its neighboring nonlinear states is achieved by the application of a small-amplitude excitation at a third frequency, where the spatial symmetry of the selected pattern is determined by the temporal symmetry of the third frequency used. This technique can also excite rapid switching between different nonlinear states.

  8. Spatio-temporal Compensation Based Object Detection for Video Surveillance Systems

    Institute of Scientific and Technical Information of China (English)

    LI Ren-jie; YU Song-yu; XIONG Hong-kai

    2008-01-01

    Moving object detection in video surveillance is an important step.This paper addresses an automatic object detection algorithm based on spatio-temporal compensation for video surveillance.Temporal difference of the pairs of two frames with a k-frame distance is utilized to obtain coarse object masks.Usually,object regions in these coarse masks have discontinuous boundaries and some holes.Region growing with the distance constraint is proposed to compensate these coarse object regions in spatial domain,followed by filling holes.The added distance constraint can prevent object regions from growing infinitely.The proposed fining holes method is simple and effective.To solve the temporarily stopping problem of moving objects,temporal compensation is proposed to compensate the object mask by utilizing temporal coherence of moving objects in temporal domain.The proposed detection algorithm can extract moving objects as completely as possible.Experimental results have successfully demonstrated the validity of the proposed algorithm.

  9. Disentangling multidimensional spatio-temporal data into their common and aberrant responses.

    Directory of Open Access Journals (Sweden)

    Young Hwan Chang

    Full Text Available With the advent of high-throughput measurement techniques, scientists and engineers are starting to grapple with massive data sets and encountering challenges with how to organize, process and extract information into meaningful structures. Multidimensional spatio-temporal biological data sets such as time series gene expression with various perturbations over different cell lines, or neural spike trains across many experimental trials, have the potential to acquire insight about the dynamic behavior of the system. For this potential to be realized, we need a suitable representation to understand the data. A general question is how to organize the observed data into meaningful structures and how to find an appropriate similarity measure. A natural way of viewing these complex high dimensional data sets is to examine and analyze the large-scale features and then to focus on the interesting details. Since the wide range of experiments and unknown complexity of the underlying system contribute to the heterogeneity of biological data, we develop a new method by proposing an extension of Robust Principal Component Analysis (RPCA, which models common variations across multiple experiments as the lowrank component and anomalies across these experiments as the sparse component. We show that the proposed method is able to find distinct subtypes and classify data sets in a robust way without any prior knowledge by separating these common responses and abnormal responses. Thus, the proposed method provides us a new representation of these data sets which has the potential to help users acquire new insight from data.

  10. Spatio-temporal evolution of shoreline changes along the coast between sousse- Monastir (Eastearn of Tunisia)

    Science.gov (United States)

    Fathallah, S.; Ben Amor, R.; Gueddari, M.

    2009-04-01

    Spatio-temporal evolution of shoreline Changes along the coast between Sousse-Monastir (Eastern of Tunisia). Safa Fathallah*, Rim Ben Amor and Moncef Gueddari Unit of Research of Geochemistry and Environmental Geology. Faculty of Science of Tunis, University of Tunis El Manar, 2092. (*) Corresponding author: safa_fathallah@yahoo.fr The coast of Sousse-Monastir in eastern of Tunisia, has undergone great changes, due to natural and anthropic factors. Increasing human use, the construction of two ports and coastal urbanization (hotels and industries) has accelerated the erosion process. The coastal defense structures (breakwaters and enrockment), built to protect the most eroded zone are efficient, but eroded zones appeared in the southern part of breakwaters. Recent and historic aerial photography was used to estimate, observe, and analyze past shoreline and bathymetric positions and trends involving shore evolution for Sousse-Monastir coast. All of the photographs were calibrated and mosaicked by Arc Map Gis 9.1, the years used are 1925, 1962, 1988, 1996, and 2001 for shoreline change analysis and 1884 and 2001 for bathymetric changes. The analyze of this photographs show that the zone located at the south of breakwater are mostly eroded with high speed process (2m/year). Another zone appears as eroded at the south part of Hamdoun River, with 1,5m/year erosion speed . Keywords: Shoreline evolution, defense structures, Sousse-Monastir coast, Tunisia.

  11. Spatio-Temporal Imaging of Light Transport in Highly Scattering Media under White Light Illumination

    CERN Document Server

    Badon, Amaury; Lerosey, Geoffroy; Boccara, Albert C; Fink, Mathias; Aubry, Alexandre

    2016-01-01

    Imaging the propagation of light in time and space is crucial in optics, notably for the study of complex media. We here demonstrate the passive measurement of time-dependent Green's functions between every point at the surface of a strongly scattering medium by means of low coherence interferometry. The experimental access to this Green's matrix is essential since it contains all the information about the complex trajectories of light within the medium. In particular, the spatio-temporal spreading of the diffusive halo can be locally investigated in the vicinity of each point then acting as a virtual source. On the one hand, this approach allows a quantitative imaging of the diffusion constant in the scattering medium with a spatial resolution of the order of a few transport mean free paths. On the other hand, our approach is able to reveal and quantify the anisotropy of light diffusion, which can be of great interest for optical characterization purposes. This study opens important perspectives both in opti...

  12. Spatio-temporal variability of the CO2 system on the Scotian Shelf

    Directory of Open Access Journals (Sweden)

    E. Horne

    2011-12-01

    Full Text Available Relative to their surface areas, coastal oceans and continental shelves host a disproportionately large fraction of ocean productivity. The Scotian Shelf is a biologically productive coastal region of the Northwestern Atlantic Ocean. This subpolar region is influenced by the outflow of the St. Lawrence Estuary system and acts as an annual source for atmospheric CO2. As part of the Atlantic Zone Monitoring Program, dissolved inorganic carbon (DIC, total alkalinity, and surface CO2 partial pressure measurements were made throughout the Scotian Shelf in 2007. A shelf-wide assessment of the spatio-temporal variability of the inorganic carbon system was made relying on observations in April and September. Between these periods, biological production results in a significant drawdown of inorganic nutrients and DIC in the surface mixed-layer, while hydrographic controls also influence seasonal changes in DIC. Net community production (NCP over the spring and summer seasons was estimated on the basis of inorganic carbon data. We find significant spatial variability in NCP with the largest values in the Southwestern Browns Bank region and a general trend of increasing NCP with distance offshore. A bulk seasonal carbon budget suggests that along-shore and cross-shelf transport may result in the export of subsurface DIC from this region.

  13. A Kinect based sign language recognition system using spatio-temporal features

    Science.gov (United States)

    Memiş, Abbas; Albayrak, Songül

    2013-12-01

    This paper presents a sign language recognition system that uses spatio-temporal features on RGB video images and depth maps for dynamic gestures of Turkish Sign Language. Proposed system uses motion differences and accumulation approach for temporal gesture analysis. Motion accumulation method, which is an effective method for temporal domain analysis of gestures, produces an accumulated motion image by combining differences of successive video frames. Then, 2D Discrete Cosine Transform (DCT) is applied to accumulated motion images and temporal domain features transformed into spatial domain. These processes are performed on both RGB images and depth maps separately. DCT coefficients that represent sign gestures are picked up via zigzag scanning and feature vectors are generated. In order to recognize sign gestures, K-Nearest Neighbor classifier with Manhattan distance is performed. Performance of the proposed sign language recognition system is evaluated on a sign database that contains 1002 isolated dynamic signs belongs to 111 words of Turkish Sign Language (TSL) in three different categories. Proposed sign language recognition system has promising success rates.

  14. Hot spot detection and spatio-temporal dynamics of dengue in Queensland, Australia

    Science.gov (United States)

    Naish, S.; Tong, S.

    2014-11-01

    Dengue has been a major public health concern in Australia since it re-emerged in Queensland in 1992-1993. This study explored spatio-temporal distribution and clustering of locally-acquired dengue cases in Queensland State, Australia and identified target areas for effective interventions. A computerised locally-acquired dengue case dataset was collected from Queensland Health for Queensland from 1993 to 2012. Descriptive spatial and temporal analyses were conducted using geographic information system tools and geostatistical techniques. Dengue hot spots were detected using SatScan method. Descriptive spatial analysis showed that a total of 2,398 locally-acquired dengue cases were recorded in central and northern regions of tropical Queensland. A seasonal pattern was observed with most of the cases occurring in autumn. Spatial and temporal variation of dengue cases was observed in the geographic areas affected by dengue over time. Tropical areas are potential high-risk areas for mosquito-borne diseases such as dengue. This study demonstrated that the locally-acquired dengue cases have exhibited a spatial and temporal variation over the past twenty years in tropical Queensland, Australia. There is a clear evidence for the existence of statistically significant clusters of dengue and these clusters varied over time. These findings enabled us to detect and target dengue clusters suggesting that the use of geospatial information can assist the health authority in planning dengue control activities and it would allow for better design and implementation of dengue management programs.

  15. Grain Yield Prediction of Henan Province Based on Spatio-temporal Regression Model

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    By using correlation analysis method,regression analysis method and time sequence method,we combine time and space,to establish grain yield spatio-temporal regression prediction model of Henan Province and all prefecture-level cities.At first,we use the grain yield in prefecture-level cities of Henan in the year 2000 and 2005,to establish regression model,and then taking the grain yield in one year as independent variable,we predict the grain yield in the fifth year afterwards.Taking the dependent variable value as independent variable again,we predict the grain yield at an interval of the same years,and based on this,predict year by year forward until the year we need.The research shows that the grain yield of Henan Province in the year 2015 and 2020 is 59.849 6 and 67.929 3 million t respectively,consistent with the research results of other scholars to some extent.

  16. Hierarchical Bayesian Spatio Temporal Model Comparison on the Earth Trapped Particle Forecast

    International Nuclear Information System (INIS)

    We compared two hierarchical Bayesian spatio temporal (HBST) results, Gaussian process (GP) and autoregressive (AR) models, on the Earth trapped particle forecast. Two models were employed on the South Atlantic Anomaly (SAA) region. Electron of >30 keV (mep0e1) from National Oceanic and Atmospheric Administration (NOAA) 15-18 satellites data was chosen as the particle modeled. We used two weeks data to perform the model fitting on a 5°x5° grid of longitude and latitude, and 31 August 2007 was set as the date of forecast. Three statistical validations were performed on the data, i.e. the root mean square error (RMSE), mean absolute percentage error (MAPE) and bias (BIAS). The statistical analysis showed that GP model performed better than AR with the average of RMSE = 0.38 and 0.63, MAPE = 11.98 and 17.30, and BIAS = 0.32 and 0.24, for GP and AR, respectively. Visual validation on both models with the NOAA map's also confirmed the superior of the GP than the AR. The variance of log flux minimum = 0.09 and 1.09, log flux maximum = 1.15 and 1.35, and in successively represents GP and AR

  17. Spatio-temporal distribution of dengue fever under scenarios of climate change in the southern Taiwan

    Science.gov (United States)

    Lee, Chieh-Han; Yu, Hwa-Lung

    2014-05-01

    Dengue fever has been recognized as the most important widespread vector-borne infectious disease in recent decades. Over 40% of the world's population is risk from dengue and about 50-100 million people are infected world wide annually. Previous studies have found that dengue fever is highly correlated with climate covariates. Thus, the potential effects of global climate change on dengue fever are crucial to epidemic concern, in particular, the transmission of the disease. This present study investigated the nonlinearity of time-delayed impact of climate on spatio-temporal variations of dengue fever in the southern Taiwan during 1998 to 2011. A distributed lag nonlinear model (DLNM) is used to assess the nonlinear lagged effects of meteorology. The statistically significant meteorological factors are considered, including weekly minimum temperature and maximum 24-hour rainfall. The relative risk and the distribution of dengue fever then predict under various climate change scenarios. The result shows that the relative risk is similar for different scenarios. In addition, the impact of rainfall on the incidence risk is higher than temperature. Moreover, the incidence risk is associated to spatially population distribution. The results can be served as practical reference for environmental regulators for the epidemic prevention under climate change scenarios.

  18. Learning Spatio-Temporal Representations for Action Recognition: A Genetic Programming Approach.

    Science.gov (United States)

    Liu, Li; Shao, Ling; Li, Xuelong; Lu, Ke

    2016-01-01

    Extracting discriminative and robust features from video sequences is the first and most critical step in human action recognition. In this paper, instead of using handcrafted features, we automatically learn spatio-temporal motion features for action recognition. This is achieved via an evolutionary method, i.e., genetic programming (GP), which evolves the motion feature descriptor on a population of primitive 3D operators (e.g., 3D-Gabor and wavelet). In this way, the scale and shift invariant features can be effectively extracted from both color and optical flow sequences. We intend to learn data adaptive descriptors for different datasets with multiple layers, which makes fully use of the knowledge to mimic the physical structure of the human visual cortex for action recognition and simultaneously reduce the GP searching space to effectively accelerate the convergence of optimal solutions. In our evolutionary architecture, the average cross-validation classification error, which is calculated by an support-vector-machine classifier on the training set, is adopted as the evaluation criterion for the GP fitness function. After the entire evolution procedure finishes, the best-so-far solution selected by GP is regarded as the (near-)optimal action descriptor obtained. The GP-evolving feature extraction method is evaluated on four popular action datasets, namely KTH, HMDB51, UCF YouTube, and Hollywood2. Experimental results show that our method significantly outperforms other types of features, either hand-designed or machine-learned. PMID:25700480

  19. Spatio-temporal regulations and functions of neuronal alternative RNA splicing in developing and adult brains.

    Science.gov (United States)

    Iijima, Takatoshi; Hidaka, Chiharu; Iijima, Yoko

    2016-08-01

    Alternative pre-mRNA splicing is a fundamental mechanism that generates molecular diversity from a single gene. In the central nervous system (CNS), key neural developmental steps are thought to be controlled by alternative splicing decisions, including the molecular diversity underlying synaptic wiring, plasticity, and remodeling. Significant progress has been made in understanding the molecular mechanisms and functions of alternative pre-mRNA splicing in neurons through studies in invertebrate systems; however, recent studies have begun to uncover the potential role of neuronal alternative splicing in the mammalian CNS. This article provides an overview of recent findings regarding the regulation and function of neuronal alternative splicing. In particular, we focus on the spatio-temporal regulation of neurexin, a synaptic adhesion molecule, by neuronal cell type-specific factors and neuronal activity, which are thought to be especially important for characterizing neural development and function within the mammalian CNS. Notably, there is increasing evidence that implicates the dysregulation of neuronal splicing events in several neurological disorders. Therefore, understanding the detailed mechanisms of neuronal alternative splicing in the mammalian CNS may provide plausible treatment strategies for these diseases.

  20. SafeBox: adaptable spatio-temporal generalization for location privacy protection

    Directory of Open Access Journals (Sweden)

    Sergio Mascetti

    2014-08-01

    Full Text Available Spatial and temporal generalization emerged in the literature as a common approach to preserve location privacy. However, existing solutions have two main shortcomings. First, spatiotemporal generalization can be used with different objectives: for example, to guarantee anonymity or to decrease the sensitivity of the location information. Hence, the strategy used to compute the generalization can follow different semantics often depending on the privacy threat, while most of the existing solutions are specifically designed for a single semantics. Second, existing techniques prevent the so-called inversion attack by adopting a top-down strategy that needs to acquire a large amount of information. This may not be feasible when this information is dynamic (e.g., position or properties of objects and needs to be acquired from external services (e.g., Google Maps. In this contribution we present a formal model of the problem that is compatible with most of the semantics proposed so far in the literature, and that supports new semantics as well. Our BottomUp algorithm for spatio-temporal generalization is compatible with the use of online services, it supports generalizations based on arbitrary semantics, and it is safe with respect to the inversion attack. By considering two datasets and two examples of semantics, we experimentally compare BottomUp with a more classical top-down algorithm, showing that BottomUp is efficient and guarantees better performance in terms of the average size (space and time of the generalized regions.

  1. Spatio-temporal analysis of tamoxifen-induced bystander effects in breast cancer cells using microfluidics.

    Science.gov (United States)

    Rios-Mondragon, Ivan; Wang, Xiang; Gerdes, Hans-Hermann

    2012-06-01

    The bystander effect in cancer therapy is the inhibition or killing of tumor cells that are adjacent to those directly affected by the agent used for treatment. In the case of chemotherapy, little is known as to how much and by which mechanisms bystander effects contribute to the elimination of tumor cells. This is mainly due to the difficulty to distinguish between targeted and bystander cells since both are exposed to the pharmaceutical compound. We here studied the interaction of tamoxifen-treated human breast cancer MCF-7 cells with their neighboring counterparts by exploiting laminar flow patterning in a microfluidic chip to ensure selective drug delivery. The spatio-temporal evolution of the bystander response in non-targeted cells was analyzed by measuring the mitochondrial membrane potential under conditions of free diffusion. Our data show that the bystander response is detectable as early as 1 hour after drug treatment and reached effective distances of at least 2.8 mm. Furthermore, the bystander effect was merely dependent on diffusible factors rather than cell contact-dependent signaling. Taken together, our study illustrates that this microfluidic approach is a promising tool for screening and optimization of putative chemotherapeutic drugs to maximize the bystander response in cancer therapy. PMID:23750189

  2. Insight into Others’ Minds: Spatio-Temporal Representations by Intrinsic Frame of Reference

    Directory of Open Access Journals (Sweden)

    Yanlong eSun

    2014-02-01

    Full Text Available Recent research has seen a growing interest in connections between domains of spatial and social cognition. Much evidence indicates that processes of representing space in distinct frames of reference (FOR contribute to basic spatial abilities as well as sophisticated social abilities such as tracking other’s intention and belief. Argument remains, however, that belief reasoning in social domain requires an innately dedicated system and cannot be reduced to low-level encoding of spatial relationships. Here we offer an integrated account advocating the critical roles of spatial representations in intrinsic frame of reference (IFOR. By re-examining the results from a spatial task (Tamborello, Sun, & Wang, 2012 and a false-belief task (Onishi & Baillargeon, 2005, we argue that spatial and social abilities share a common origin at the level of spatio-temporal association and predictive learning, where multiple FOR-based representations provide the basic building blocks for efficient and flexible partitioning of the environmental statistics. We also discuss neuroscience evidence supporting these mechanisms. We conclude that FOR-based representations may bridge the conceptual as well as the implementation gaps between the burgeoning fields of social and spatial cognition.

  3. Economic Development And Transfrontier Shipments Of Waste In Poland – Spatio-Temporal Analysis

    Directory of Open Access Journals (Sweden)

    Antczak Elżbieta

    2014-12-01

    Full Text Available The aim of the paper is to apply the spatio-temporal Environmental Kuznets Curve (SpEKC to test the relationship between economic growth and the amount of collected mixed municipal waste. The analysis was conducted at the level of sixty-six Polish sub-regions. The study contained selected environmental indicators. The dependent variable - the amount of municipal waste generated in kilograms per capita characterized the state of the environment. The GDP per capita in constant prices (as an explanatory variable presented the level of economic development of the sub-regions. In the empirical part of the research there were used spatial panel data models based on EKCs. It determined the levels of economic development, at which the amount of produced wastes has fallen or increased, depending on the wealth of the region. The application of different types of spatial weight matrices was an important element of this modelling. Data obtained the years 2005-2012. Models were estimated in the RCran package.

  4. A Model of the Spatio-temporal Dynamics of Drosophila Eye Disc Development

    Science.gov (United States)

    Fried, Patrick; Sánchez-Aragón, Máximo; Lehtinen, Birgitta; Casares, Fernando; Iber, Dagmar

    2016-01-01

    Patterning and growth are linked during early development and have to be tightly controlled to result in a functional tissue or organ. During the development of the Drosophila eye, this linkage is particularly clear: the growth of the eye primordium mainly results from proliferating cells ahead of the morphogenetic furrow (MF), a moving signaling wave that sweeps across the tissue from the posterior to the anterior side, that induces proliferating cells anterior to it to differentiate and become cell cycle quiescent in its wake. Therefore, final eye disc size depends on the proliferation rate of undifferentiated cells and on the speed with which the MF sweeps across the eye disc. We developed a spatio-temporal model of the growing eye disc based on the regulatory interactions controlled by the signals Decapentaplegic (Dpp), Hedgehog (Hh) and the transcription factor Homothorax (Hth) and explored how the signaling patterns affect the movement of the MF and impact on eye disc growth. We used published and new quantitative data to parameterize the model. In particular, two crucial parameter values, the degradation rate of Hth and the diffusion coefficient of Hh, were measured. The model is able to reproduce the linear movement of the MF and the termination of growth of the primordium. We further show that the model can explain several mutant phenotypes, but fails to reproduce the previously observed scaling of the Dpp gradient in the anterior compartment. PMID:27626238

  5. Spatio-temporal variation of the diterpene steviol in Stevia rebaudiana grown under different photoperiods.

    Science.gov (United States)

    Ceunen, Stijn; Geuns, Jan M C

    2013-05-01

    As part of an ongoing study on the effects of photoperiodism on the metabolism of steviol glycosides (SVglys) in Stevia rebaudiana, the spatio-temporal variations of free steviol (SV) have now been evaluated. For its quantitation, an internal standard method was used, based upon a specific fluorometric detection of SV as its methoxycoumarinyl derivative. The level of free SV in leaves did not exceed 30 μg/g dry wt and was at least 1000-fold smaller than that of its glycosidic conjugates. In other organs, free SV was mainly measured in stem tissue and apices, with relatively large amounts measured in the latter. Similarly to SVglys, the content of free SV was influenced by photoperiod and genotype. In plants grown under long-days (LD) of 16 h, more spatial variations were seen compared to those under short-days (SD) of 8h. In the former, upper leaves contained almost four times more free SV compared to lower ones near the end of vegetative growth. In addition, the correlation between SV and its glycosidic conjugates was more linear under SD. Despite the variability of SV levels, a decrease was noted in all conditions after flower opening, which can be related a decreased transcription of the biosynthetic genes involved.

  6. Spatio Temporal Expression Pattern of an Insecticidal Gene (cry2A in Transgenic Cotton Lines

    Directory of Open Access Journals (Sweden)

    Allah BAKHSH

    2012-11-01

    Full Text Available The production of transgenic plants with stable, high-level transgene expression is important for the success of crop improvement programs based on genetic engineering. The present study was conducted to evaluate genomic integration and spatio temporal expression of an insecticidal gene (cry2A in pre-existing transgenic lines of cotton. Genomic integration of cry2A was evaluated using various molecular approaches. The expression levels of cry2A were determined at vegetative and reproductive stages of cotton at regular intervals. These lines showed a stable integration of insecticidal gene in advance lines of transgenic cotton whereas gene expression was found variable with at various growth stages as well as in different plant parts throughout the season. The leaves of transgenic cotton were found to have maximum expression of cry2A gene followed by squares, bolls, anthers and petals. The protein level in fruiting part was less as compared to other parts showing inconsistency in gene expression. It was concluded that for culturing of transgenic crops, strategies should be developed to ensure the foreign genes expression efficient, consistent and in a predictable manner.

  7. Characterizing the spatio-temporal and energy-dependent response of riometer absorption to particle precipitation

    Science.gov (United States)

    Kellerman, Adam; Makarevich, Roman; Spanswick, Emma; Donovan, Eric; Shprits, Yuri

    2016-07-01

    Energetic electrons in the 10's of keV range precipitate to the upper D- and lower E-region ionosphere, and are responsible for enhanced ionization. The same particles are important in the inner magnetosphere, as they provide a source of energy for waves, and thus relate to relativistic electron enhancements in Earth's radiation belts.In situ observations of plasma populations and waves are usually limited to a single point, which complicates temporal and spatial analysis. Also, the lifespan of satellite missions is often limited to several years which does not allow one to infer long-term climatology of particle precipitation, important for affecting ionospheric conditions at high latitudes. Multi-point remote sensing of the ionospheric plasma conditions can provide a global view of both ionospheric and magnetospheric conditions, and the coupling between magnetospheric and ionospheric phenomena can be examined on time-scales that allow comprehensive statistical analysis. In this study we utilize multi-point riometer measurements in conjunction with in situ satellite data, and physics-based modeling to investigate the spatio-temporal and energy-dependent response of riometer absorption. Quantifying this relationship may be a key to future advancements in our understanding of the complex D-region ionosphere, and may lead to enhanced specification of auroral precipitation both during individual events and over climatological time-scales.

  8. Spatial, temporal, and spatio-temporal modulational instabilities in a planar dual-core waveguide

    Science.gov (United States)

    Sharma, Vivek Kumar; Goyal, Amit; Raju, Thokala Soloman; Kumar, C. N.; Panigrahi, Prasanta K.

    2015-08-01

    We investigate modulational instability (MI) in a planar dual-core waveguide (DWG), with a Kerr and non-Kerr polarizations based on coupled nonlinear Schrödinger equations in the presence of linear coupling term, coupling coefficient dispersion (CCD) and other higher order effects such as third order dispersion (TOD), fourth order dispersion (FOD), and self-steepening (ss). By employing a standard linear stability analysis, we obtain analytically, an explicit expression for the MI growth rate as a function of spatial and temporal frequencies of the perturbation and the material response time. Pertinently, we explicate three different types of MI-spatial, temporal, and spatio-temporal MI for symmetric/antisymmetric continuous wave (cw), and spatial MI for asymmetric cw, and emphasize that the earlier studies on MI in DWG do not account for this physics. Essentially, we discuss two cases: (i) the case for which the two waveguides are linearly coupled and the CCD term plays no role and (ii) the case for which the linear coupling term is zero and the CCD term is nonzero. In the former case, we find that the MI growth rate in the three different types of MI, seriously depends on the coupling term, quintic nonlinearity, FOD, and ss. In the later case, the presence of quintic nonlinearity, CCD, FOD, and ss seriously enhances the formation of MI sidebands, both in normal as well as anomalous dispersion regimes. For asymmetric cw, spatial MI is dependent on linear coupling term and quintic nonlinearity.

  9. Spatio-temporal properties and evolution of the 2013 Aigion earthquake swarm (Corinth Gulf, Greece)

    Science.gov (United States)

    Mesimeri, M.; Karakostas, V.; Papadimitriou, E.; Schaff, D.; Tsaklidis, G.

    2016-04-01

    The 2013 Aigion earthquake swarm that took place in the west part of Corinth Gulf is investigated for revealing faulting and seismicity properties of the activated area. The activity started on May 21 and was appreciably intense in the next 3 months. The recordings of the Hellenic Unified Seismological Network (HUSN), which is adequately dense around the affected area, were used to accurately locate 1501 events. The double difference ( hypoDD) technique was employed for the manually picked P and S phases along with differential times derived from waveform cross-correlation for improving location accuracy. The activated area with dimensions 6 × 2 km is located approximately 5 km SE of Aigion. Focal mechanisms of 77 events with M ≥ 2.0 were determined from P wave first motions and used for the geometry identification of the ruptured segments. Spatio-temporal distribution of earthquakes revealed an eastward and westward hypocentral migration from the starting point suggesting the division of the seismic swarm into four major clusters. The hypocentral migration was corroborated by the Coulomb stress change calculation, indicating that four fault segments involved in the rupture process successively failed by stress change encouragement. Examination of fluid flow brought out that it cannot be unambiguously considered as the driving mechanism for the successive failures.

  10. Mass spectrometric analysis of spatio-temporal dynamics of crustacean neuropeptides.

    Science.gov (United States)

    OuYang, Chuanzi; Liang, Zhidan; Li, Lingjun

    2015-07-01

    Neuropeptides represent one of the largest classes of signaling molecules used by nervous systems to regulate a wide range of physiological processes. Over the past several years, mass spectrometry (MS)-based strategies have revolutionized the discovery of neuropeptides in numerous model organisms, especially in decapod crustaceans. Here, we focus our discussion on recent advances in the use of MS-based techniques to map neuropeptides in the spatial domain and monitoring their dynamic changes in the temporal domain. These MS-enabled investigations provide valuable information about the distribution, secretion and potential function of neuropeptides with high molecular specificity and sensitivity. In situ MS imaging and in vivo microdialysis are highlighted as key technologies for probing spatio-temporal dynamics of neuropeptides in the crustacean nervous system. This review summarizes the latest advancement in MS-based methodologies for neuropeptide analysis including typical workflow and sample preparation strategies as well as major neuropeptide families discovered in decapod crustaceans. This article is part of a Special Issue entitled: Neuroproteomics: Applications in Neuroscience and Neurology.

  11. An Accessible Method for Implementing Hierarchical Models with Spatio-Temporal Abundance Data

    Science.gov (United States)

    Ross, Beth E.; Hooten, Melvin B.; Koons, David N.

    2012-01-01

    A common goal in ecology and wildlife management is to determine the causes of variation in population dynamics over long periods of time and across large spatial scales. Many assumptions must nevertheless be overcome to make appropriate inference about spatio-temporal variation in population dynamics, such as autocorrelation among data points, excess zeros, and observation error in count data. To address these issues, many scientists and statisticians have recommended the use of Bayesian hierarchical models. Unfortunately, hierarchical statistical models remain somewhat difficult to use because of the necessary quantitative background needed to implement them, or because of the computational demands of using Markov Chain Monte Carlo algorithms to estimate parameters. Fortunately, new tools have recently been developed that make it more feasible for wildlife biologists to fit sophisticated hierarchical Bayesian models (i.e., Integrated Nested Laplace Approximation, ‘INLA’). We present a case study using two important game species in North America, the lesser and greater scaup, to demonstrate how INLA can be used to estimate the parameters in a hierarchical model that decouples observation error from process variation, and accounts for unknown sources of excess zeros as well as spatial and temporal dependence in the data. Ultimately, our goal was to make unbiased inference about spatial variation in population trends over time.

  12. Evaluating Projected Changes in Mean Processes, Extreme Events, and their Spatio-Temporal Dependence Structures

    Science.gov (United States)

    Ganguly, A. R.; Steinhaeuser, K.; Kodra, E. A.; Kao, S.

    2010-12-01

    Observational datasets - both raw measurements and derived data products such as reanalysis data - are used to evaluate climate simulations run in forecast and hindcast modes. Bias and uncertainty in mean processes is quantified using statistical comparisons between observations and model-generated outputs. Weather and hydrological extremes under climate change are characterized using both event definitions and extreme value theory (EVT), and their aggregate statistics (intensity, duration and frequency) are likewise compared. The geographic variability and topographical biases are examined at continental to regional scales, and dependence structures (both spatio-temporal autocorrelation and long-range dependence) are assessed using statistical and nonlinear dynamical methods. These tools were developed primarily using the CMIP3/IPCC-AR4 archived model outputs, and are being additional tested with simulations from regional climate models which dynamically downscale the AR4 archives. This combination of traditional and novel tools is thus geared towards evaluation of multiple climate models which may handle processes or generate outputs at different spatial and temporal scales. The tools are expected to be immediately applicable to the CMIP5 data when it becomes available. The anticipated space-time resolutions will pose algorithmic challenges and computational demands, which will be addressed using analytic solutions and implementations thereof on high-performance scientific computing platforms.

  13. Spatio-temporal Characteristics of Residential Land Growth in Hefei of Anhui Province, China

    Institute of Scientific and Technical Information of China (English)

    CHU Jinlong; XU Jiangang; GAO Shu

    2007-01-01

    We used the maps of urban land-use in 1978, 1991, 1994, 2000 and 2004, and softwares such as ArcGIS, Fragstats to analyze the spatio-temporal process of urban residential space quantitatively. Some methods, such as direction analysis and landscape pattern analysis, were employed. The results show that: 1) the residential land grew very rapidly in Hefei from 1978 to 2004, and the increased land was distributed mainly in the central city zone surrounded by a moat; however, after 1994, it was distributed mainly outside the 1th Ring Road; 2) the expansion speeds were very different in different directions: there exists a fastest expansion of residential land in the directions of NE-NNE, SW and SSE, and a slowest one in the directions of E and SEE; 3) the residential land growth went through four stages: slow circular expansion in 1978-1991, 'axes + fan wings' expansion in 1991-1994, more rapid circular expansion in 1994-2000 and 'fan-wings' expansion in 2000-2004; 4) the expansion intensity was also different in all directions in the period of 1978 to 1994, and the most was in SW and then NW; and 5) there were more and more residential land area, and the spatial agglomeration was improved increasingly.

  14. Spatio-temporal Kinetics of Nontypeable Haemophilus influenzae(NTHi) Biofilms

    Science.gov (United States)

    Dhanji, Aleya; Rosas, Lucia; Ray, William; Jayaprakash, Ciriyam; Bakaletz, Lauren; Das, Jayajit

    2014-03-01

    Bacteria can form complex spatial structures known as biofilms. Biofilm formation is frequently associated with chronic infections due to the greatly enhanced antibiotic resistance of resident bacteria. However, our understanding of the role of basic processes, such as bacteria replication and resource consumption, in controlling the development and temporal change of the spatial structure remains rudimentary. Here, we examine the growth of cultured biofilms by the opportunistic pathogen NTHi. Through spatial information extracted from confocal microscopy images, we quantitatively characterize the biofilm structure as it evolves over time. We find that the equal-time height-height pair correlation function decreases with distance and scales with time for small length scales. Furthermore, both the surface roughness and the correlation length perpendicular to the surface growth direction increase with time initially and then decrease. We construct a spatially resolved agent based model beginning with the simplest possible case of a single bacteria species Fisher-Kolmogorov-Petrovsky-Piscounov equation. We show that it cannot describe the observed spatio-temporal behavior and suggest an improved two-species model that better captures the dynamics of the NTHi system. Supported by The Research Institute at Nationwide Children's Hospital.

  15. Large-Scale Spatio-Temporal Patterns of Mediterranean Cephalopod Diversity.

    Directory of Open Access Journals (Sweden)

    Stefanie Keller

    Full Text Available Species diversity is widely recognized as an important trait of ecosystems' functioning and resilience. Understanding the causes of diversity patterns and their interaction with the environmental conditions is essential in order to effectively assess and preserve existing diversity. While diversity patterns of most recurrent groups such as fish are commonly studied, other important taxa such as cephalopods have received less attention. In this work we present spatio-temporal trends of cephalopod diversity across the entire Mediterranean Sea during the last 19 years, analysing data from the annual bottom trawl survey MEDITS conducted by 5 different Mediterranean countries using standardized gears and sampling protocols. The influence of local and regional environmental variability in different Mediterranean regions is analysed applying generalized additive models, using species richness and the Shannon Wiener index as diversity descriptors. While the western basin showed a high diversity, our analyses do not support a steady eastward decrease of diversity as proposed in some previous studies. Instead, high Shannon diversity was also found in the Adriatic and Aegean Seas, and high species richness in the eastern Ionian Sea. Overall diversity did not show any consistent trend over the last two decades. Except in the Adriatic Sea, diversity showed a hump-shaped trend with depth in all regions, being highest between 200-400 m depth. Our results indicate that high Chlorophyll a concentrations and warmer temperatures seem to enhance species diversity, and the influence of these parameters is stronger for richness than for Shannon diversity.

  16. Building, Sharing and Exploiting Spatio-Temporal Aggregates in Vehicular Networks

    Directory of Open Access Journals (Sweden)

    Dorsaf Zekri

    2014-01-01

    Full Text Available This article focuses on data aggregation in vehicular ad hoc networks (VANETs. In such networks, data produced by sensors or crowdsourcers are exchanged between vehicles in order to warn or inform drivers when an event occurs (e.g., an accident, a traffic congestion, a parking space released, a vehicle with non-functioning brake lights, etc.. In the following, we propose to generate spatio-temporal aggregates containing these data in order to keep a summary of past events. We therefore use Flajolet-Martin sketches. Our goal is then to exploit these aggregates to better assist the drivers. These aggregates may indeed produce additional knowledge that may be useful when no event has been recently transmitted by surrounding vehicles or when some knowledge about the global demand may improve the decision that need to be taken at the vehicle level. To prove the effectiveness of our approach, an extensive experimental evaluation has been performed considering vehicles looking for an available parking space, that proves the interest of our proposal. The experimentations indeed show that the use of our aggregation structure significantly reduces the time needed to actually find a parking space. It also increases the percentage of vehicles finding such a resource in a bounded time in congested situations.

  17. An Object-Oriented Modeling and Implementation of Spatio-Temporal Knowledge Discovery System

    Directory of Open Access Journals (Sweden)

    K.Venkateswara Rao

    2011-04-01

    Full Text Available Spatiotemporal databases deal with changes to spatial objects with time. The Spatiotemporal knowledgediscovery process involves the integration of such database systems with data warehousing, data miningand online-analytical processing technologies. The applications in this domain will process spatial,temporal and attribute data elements and use spatio-temporal relationships among these elements. Theseapplications deal with the evolution of spatial objects and changes in their topological relationships,associations along with time. These advanced database applications require storing, management andprocessing of complex spatiotemporal data. In this paper we consider the classification and modelingrequirements for spatiotemporal applications, System modeling, preprocessing spatiotemporal data,discovering spatiotemporal topological relationships and extension of apriori algorithm for miningspatiotemporal frequent predicates. The design of an appropriate system that can capturespatiotemporal features of datasets is discussed. Prototype implementation of the system is carried out ontop of open source object relational spatial database management system called postgresql and postgis.The algorithms are experimented on historical cadastral datasets which are created using OpenJump.The results that are visualized using OpenJump software are presented.

  18. Spatio-temporal variation and focal mechanism of the Wenchuan Afs8.0 earthquake sequence

    Institute of Scientific and Technical Information of China (English)

    Wanzheng Cheng; Zhiwei Zhang; Xiang Ruan

    2009-01-01

    Based on abundant aftershock sequence data of the Wenchuan Ms8.0 earthquake on May 12, 2008, we studied the spatio-temporal variation process and segmentation rupture characteristic. Dense aftershocks distribute along Longmen-shan central fault zone of NE direction and form a narrow strip with the length of 325 km and the depth between several and 40 km. The depth profile (section of NW direction) vertical to the strike of aftershock zone (NE direction) shows anisomer-ous wedgy distribution characteristic of aftershock concentrated regions; it is related to the force form of the Longmenshan nappe tectonic belt. The stronger aftershocks could be divided into northern segment and southern segment apparently and the focal depths of strong aftershocks in the 50 km area between northern segment and southern segment are shallower. It seems like 'to be going to rupture' segment. We also study focal mechanisms and segmentation of strong aftershocks. The principal compressive stress azimuth of aftershock area is WNW direction and the faulting types of aftershocks at southern and northern segment have the same proportion. Because aftershocks distribute on different secondary faults, their focal mechanisms present complex local tectonic stress field. The faulting of seven strong earthquakes on the Longmenshan central fault is mainly characterized by thrust with the component of right-lateral strike-slip. Meantime six strong aftershocks on the Longmenshan back-range fault and Qingchuan fault present strike-slip faulting. At last we discuss the complex segmentation rupture mechanism of the Wenchuan earthquake.

  19. Rogue events in spatio-temporal numerical simulations of unidirectional waves in basins of different depth

    CERN Document Server

    Slunyaev, Alexey; Didenkulova, Ira

    2016-01-01

    The evolution of unidirectional nonlinear sea surface waves is calculated numerically by means of solutions of the Euler equations. The wave dynamics corresponds to quasi-equilibrium states characterized by JONSWAP spectra. The spatio-temporal data are collected and processed providing information about the wave height probability and typical appearance of abnormally high waves (rogue waves). The waves are considered at different water depths ranging from deep to relatively shallow cases ($k_p h > 0.8$, where $k_p$ is the peak wavenumber, and $h$ is the local depth). The asymmetry between front and rear rogue wave slopes is identified; it becomes apparent for sufficiently high waves in rough sea states at all considered depths. The lifetimes of rogue events may reach up to 30-60 wave periods depending on the water depth. The maximum observed wave has height of about 3 significant wave heights. A few randomly chosen in-situ time series from the Baltic Sea are in agreement with the general picture of the numeri...

  20. Spatio-temporal clustering of cholera: The impact of flood control in Matlab, Bangladesh, 1983–2003

    OpenAIRE

    Carrel, Margaret A.; Emch, Michael; Streatfield, Peter K; Yunus, Mohammad

    2009-01-01

    Introducing flood control to an area of endemic waterborne diseases could have significant impacts on spatio-temporal occurrence of cholera. Using 21-years of data from Bangladesh, we conducted cluster analysis to explore changes in spatial and temporal distribution of cholera incidence since construction of flood control structures. Striking changes in temporal cluster patterns emerged, including a shift from dry season to rainy season clusters following flood protection and delayed clusteri...

  1. Characteristics of juvenile survivors reveal spatio-temporal differences in early life stage survival of Baltic cod

    DEFF Research Database (Denmark)

    Huwer, Bastian; Hinrichsen, H.H.; Böttcher, U.;

    2014-01-01

    The spatio-temporal origin of surviving juvenile Baltic cod Gadus morhua was investigated by coupling age information from otolith microstructure analysis and hydrodynamic modeling, which allowed backtracking of drift routes in time and space. The suitability of hydrodynamic modeling for drift si...... of Baltic cod, in particular with respect to the critical period and match-mismatch hypotheses, and to possible implications for the placement of a Marine Protected Area which was established to ensure undisturbed spawning of Baltic cod....

  2. Spatio-temporal variability of water vapor investigated by lidar and FTIR vertical soundings above Mt. Zugspitze

    OpenAIRE

    H. Vogelmann; R. Sussmann; T. Trickl; A. Reichert

    2015-01-01

    Water vapor is the most important greenhouse gas and its spatio-temporal variability strongly exceeds that of all other greenhouse gases. However, this variability has hardly been studied quantitatively so far. We present an analysis of a five-year period of water vapor measurements in the free troposphere above Mt. Zugspitze (2962 m a.s.l., Germany). Our results are obtained from a combination of measurements of vertically integrated water vapor (IWV), recorded with ...

  3. Lipidomic and Spatio-Temporal Imaging of Fat by Mass Spectrometry in Mice Duodenum during Lipid Digestion

    OpenAIRE

    Alexandre Seyer; Michela Cantiello; Justine Bertrand-Michel; Véronique Roques; Michel Nauze; Valérie Bézirard; Xavier Collet; David Touboul; Alain Brunelle; Christine Coméra

    2013-01-01

    Intestinal absorption of dietary fat is a complex process mediated by enterocytes leading to lipid assembly and secretion of circulating lipoproteins as chylomicrons, vLDL and intestinal HDL (iHDL). Understanding lipid digestion is of importance knowing the correlation between excessive fat absorption and atherosclerosis. By using time-of-flight secondary ion mass spectrometry (TOF-SIMS), we illustrated a spatio-temporal localization of fat in mice duodenum, at different times of digestion af...

  4. Assessing spatio-temporal variability and trends in modelled and measured Greenland Ice Sheet albedo (2000–2013)

    OpenAIRE

    P. M. Alexander; Tedesco, M.; X. Fettweis; R. S. W. van de Wal; C. J. P. P. Smeets; M. R. van den Broeke

    2014-01-01

    Accurate measurements and simulations of Greenland Ice Sheet (GrIS) surface albedo are essential, given the role of surface albedo in modulating the amount of absorbed solar radiation and meltwater production. In this study, we assess the spatio-temporal variability of GrIS albedo during June, July, and August (JJA) for the period 2000–2013. We use two remote sensing products derived from data collected by the Moderate Resolution Imaging Spectroradiometer (MODIS), as well as...

  5. Spatio-Temporal Trends and Identification of Correlated Variables with Water Quality for Drinking-Water Reservoirs

    Directory of Open Access Journals (Sweden)

    Qing Gu

    2015-10-01

    Full Text Available It is widely accepted that characterizing the spatio-temporal trends of water quality parameters and identifying correlated variables with water quality are indispensable for the management and protection of water resources. In this study, cluster analysis was used to classify 56 typical drinking water reservoirs in Zhejiang Province into three groups representing different water quality levels, using data of four water quality parameters for the period 2006–2010. Then, the spatio-temporal trends in water quality were analyzed, assisted by geographic information systems (GIS technology and statistical analysis. The results indicated that the water quality showed a trend of degradation from southwest to northeast, and the overall water quality level was exacerbated during the study period. Correlation analysis was used to evaluate the relationships between water quality parameters and ten independent variables grouped into four categories (land use, socio-economic factors, geographical features, and reservoir attributes. According to the correlation coefficients, land use and socio-economic indicators were identified as the most significant factors related to reservoir water quality. The results offer insights into the spatio-temporal variations of water quality parameters and factors impacting the water quality of drinking water reservoirs in Zhejiang Province, and they could assist managers in making effective strategies to better protect water resources.

  6. An agent-based model driven by tropical rainfall to understand the spatio-temporal heterogeneity of a chikungunya outbreak.

    Science.gov (United States)

    Dommar, Carlos J; Lowe, Rachel; Robinson, Marguerite; Rodó, Xavier

    2014-01-01

    Vector-borne diseases, such as dengue, malaria and chikungunya, are increasing across their traditional ranges and continuing to infiltrate new, previously unaffected, regions. The spatio-temporal evolution of these diseases is determined by the interaction of the host and vector, which is strongly dependent on social structures and mobility patterns. We develop an agent-based model (ABM), in which each individual is explicitly represented and vector populations are linked to precipitation estimates in a tropical setting. The model is implemented on both scale-free and regular networks. The spatio-temporal transmission of chikungunya is analysed and the presence of asymptomatic silent spreaders within the population is investigated in the context of implementing travel restrictions during an outbreak. Preventing the movement of symptomatic individuals is found to be an insufficient mechanism to halt the spread of the disease, which can be readily carried to neighbouring nodes via sub-clinical individuals. Furthermore, the impact of topology structure vs. precipitation levels is assessed and precipitation is found to be the dominant factor driving spatio-temporal transmission. PMID:23958228

  7. Spatio-temporal variability of shallow groundwater quality in a typical agricultural catchment in subtropical central China

    Science.gov (United States)

    Liu, X.

    2015-12-01

    Excessive agriculture-sourced N leaching into shallow groundwater has deteriorated the domestic water quality in rural China. To effectively prevent the above environmental contamination issue, it is an essential prerequisite of exploring the spatio-temporal variability (stV) of the groundwater quality. In this study, a large observation program was deployed to observe ammonium-N (NH4N), nitrate-N (NO3N) and total N (TN) concentrations in 194 groundwater observation wells (1.5 m deep from soil surface) from April 2010 to November 2012 in the Jinjing river catchment in Hunan Province of China. A logit function was applied to transform NH4N, NO3N and TN data for normality; the resultant variables were thus named as NH4Nt, NO3Nt and TNt, respectively. A spatio-temporal semivariogram model in a sum-metric form was used to quantify the stV of NH4Nt, NO3Nt and TNt. The results indicated that the 33-month means ± standard deviations of the NH4N, NO3N and TN concentrations were 0.75±0.10, 1.60±0.19 and 2.99±0.29 mg N L-1, respectively. NH4Nt and NO3Nt exhibited a strong spatio-temporal dependence, while TNt only presented a strong temporal structure. Spatio-temporal ordinary kriging (stOK) was applied to predict the spatio-temporal distributions of NH4N, NO3N and TN over the catchment. The cross-validation results indicated that the stOK predictions for NH4N (r=0.48, RMSE=1.11 mg N L-1), NO3N (r=0.46, RMSE=1.21 mg N L-1) outperformed that for TN (r=0.29, RMSE=2.11 mg N L-1). Referenced to the Chinese Environmental Quality Standards for Groundwater (GB/T 14848-93), the proportions of areas contaminated by NH4N, NO3N and TN in the catchment over a 33-month period were 20.5%, 1.46%, and 5.07%, respectively. Our findings suggested that the Jinjing groundwater was mainly polluted by NH4N, which is probably attributed to the intensive rice agriculture featured with high urea fertilizer applications in the catchment.

  8. Measuring User Similarity Using Electric Circuit Analysis: Application to Collaborative Filtering

    OpenAIRE

    Joonhyuk Yang; Jinwook Kim; Wonjoon Kim; Young Hwan Kim

    2012-01-01

    We propose a new technique of measuring user similarity in collaborative filtering using electric circuit analysis. Electric circuit analysis is used to measure the potential differences between nodes on an electric circuit. In this paper, by applying this method to transaction networks comprising users and items, i.e., user-item matrix, and by using the full information about the relationship structure of users in the perspective of item adoption, we overcome the limitations of one-to-one si...

  9. Spatio-temporal surface-subsurface water exchanges: from the local to the watershed scale

    Science.gov (United States)

    Rivière, Agnès; Flipo, Nicolas; Mouhri, Amer; Ansart, Patrick; Baudin, Aurélien; Berrhouma, Asma; Bodet, Ludovic; Cocher, Emmanuel; Cucchi, Karina; Durand, Véronique; Flageul, Sébastien; de Fouquet, Chantal; Goblet, Patrick; Hovhannissian, Gaghik; Jost, Anne; Pasquet, Sylvain; Rejiba, Fayçal; Rubin, Yoram; Tallec, Gaëlle; Mouchel, Jean-Marie

    2016-04-01

    Understanding the temporal and spatial variations of the surface-subsurface water exchanges is a prerequisite to achieve sustainable water use in basin. The concept of nested stream-aquifer interfaces (Flipo et al., 2014) is used to simulate the variation of the spatio-temporal surface-subsurface exchanges at the watershed scale from LOcal MOnitoring Stations (LOMOSs) measurements of the stream-aquifer exchanges. This method is applied along the stream network of the Avenelles basin. The Avenelles basin (46 km2) is located 70 km east from Paris. The basin is composed of a multi-layer aquifer system which consists of two limestone aquifers: the Brie aquifer (Oligocene) and the Champigny aquifer (Eocene) separated by a clayey aquitard. The meandering river is shallow, connected with the Brie aquifer in its upstream part and the Champigny aquifer in its downstream part. A high-frequency hydrologic monitoring network was deployed on the basin from 1960. The network measures water levels and water temperatures in the aquifers, and in-stream discharge rates. Five LOMOSs have been operating since 2012 along the stream-network (two upstream, two intermediate, and one downstream site) to monitor spatio-temporal stream-aquifer exchanges over years. LOMOSs are composed of one or two shallow piezometers to monitor the temperature and the hydraulic head variations in the aquifers, two hyporheic zone (HZ) temperature profiles located close to each river bank and one water level and temperature monitoring system in the river. A local 2D thermo-hydro model is used to determine hydrogeological and thermal properties of the aquifer and the HZ by inversion and to quantify the stream-aquifer exchanges at the local scale. We performed a pseudo 3D hydro(geo)logical simulation, over 23 years, at the Avenelles basin scale by the used of CAWAQS modelling platform. The CAWAQS platform is composed of four spatially distributed modules (Surface, Sub-surface, River and Groundwater

  10. Spatio-temporal changes in biomass carbon sinks in China's forests from 1977 to 2008.

    Science.gov (United States)

    Guo, Zhaodi; Hu, Huifeng; Li, Pin; Li, Nuyun; Fang, Jingyun

    2013-07-01

    Forests play a leading role in regional and global carbon (C) cycles. Detailed assessment of the temporal and spatial changes in C sinks/sources of China's forests is critical to the estimation of the national C budget and can help to constitute sustainable forest management policies for climate change. In this study, we explored the spatio-temporal changes in forest biomass C stocks in China between 1977 and 2008, using six periods of the national forest inventory data. According to the definition of the forest inventory, China's forest was categorized into three groups: forest stand, economic forest, and bamboo forest. We estimated forest biomass C stocks for each inventory period by using continuous biomass expansion factor (BEF) method for forest stands, and the mean biomass density method for economic and bamboo forests. As a result, China's forests have accumulated biomass C (i.e., biomass C sink) of 1896 Tg (1 Tg=10(12) g) during the study period, with 1710, 108 and 78 Tg C in forest stands, and economic and bamboo forests, respectively. Annual forest biomass C sink was 70.2 Tg C a(-1), offsetting 7.8% of the contemporary fossil CO2 emissions in the country. The results also showed that planted forests have functioned as a persistent C sink, sequestrating 818 Tg C and accounting for 47.8% of total C sink in forest stands, and that the old-, mid- and young-aged forests have sequestrated 930, 391 and 388 Tg C from 1977 to 2008. Our results suggest that China's forests have a big potential as biomass C sink in the future because of its large area of planted forests with young-aged growth and low C density. PMID:23722235

  11. Spatio-temporal dynamics of global H5N1 outbreaks match bird migration patterns

    Directory of Open Access Journals (Sweden)

    Yali Si

    2009-11-01

    Full Text Available The global spread of highly pathogenic avian influenza H5N1 in poultry, wild birds and humans, poses a significant pandemic threat and a serious public health risk. An efficient surveillance and disease control system relies on the understanding of the dispersion patterns and spreading mechanisms of the virus. A space-time cluster analysis of H5N1 outbreaks was used to identify spatio-temporal patterns at a global scale and over an extended period of time. Potential mechanisms explaining the spread of the H5N1 virus, and the role of wild birds, were analyzed. Between December 2003 and December 2006, three global epidemic phases of H5N1 influenza were identified. These H5N1 outbreaks showed a clear seasonal pattern, with a high density of outbreaks in winter and early spring (i.e., October to March. In phase I and II only the East Asia Australian flyway was affected. During phase III, the H5N1 viruses started to appear in four other flyways: the Central Asian flyway, the Black Sea Mediterranean flyway, the East Atlantic flyway and the East Africa West Asian flyway. Six disease cluster patterns along these flyways were found to be associated with the seasonal migration of wild birds. The spread of the H5N1 virus, as demonstrated by the space-time clusters, was associated with the patterns of migration of wild birds. Wild birds may therefore play an important role in the spread of H5N1 over long distances. Disease clusters were also detected at sites where wild birds are known to overwinter and at times when migratory birds were present. This leads to the suggestion that wild birds may also be involved in spreading the H5N1 virus over short distances.

  12. Spatio-temporal variability of periphytic protozoa related to environment in the Niyang River, Tibet, China

    Science.gov (United States)

    Liu, Haiping; Ye, Shaowen; Yang, Xuefeng; Guo, Chuanbo; Zhang, Huijuan; Fan, Liqing; Zhang, Liangsong; Sovan, Lek; Li, Zhongjie

    2016-06-01

    The Niyang River, a main tributary of the Yarlung Zangbo River, is an important and typical plateau river ecosystem in Tibet, China. At present, few studies have focused on its aquatic living resources and river ecology. In this study, the composition, abundance, and diversity of periphytic protozoa were investigated across four seasons from 2008 to 2009 to better understand their spatio-temporal patterns and relationship to the environment. Our investigation shows that periphytic protozoa in the Niyang River contained 15 genera, belonged to Tubulinea, Alveolata, Discosea and Rhizaria, Alveolata possessed most genera, up to nine, with highest share in abundance, exceeding 50%, Difflugia and Glaucoma were dominant genera. Moreover, four diversity indices of periphytic protozoa, including species richness, total abundance, Shannon-Wiener diversity index and Pielou's evenness index, displayed a significant descending trend as the seasons continued, in the order of winter, spring, summer and autumn; with a significant difference existing between winter and summer (or autumn) for Shannon-Wiener diversity index and species richness (P0.05). In addition, canonical correlation analysis (CCA) shows that the densities of Difflugia, Glaucomais, Enchelydium, Cyphoderia, and Enchelys correlate with water temperature, alkalinity, hardness, pH, and dissolved oxygen, respectively. Lastly, the relationship between periphytic protozoa diversity and the environmental factors of the Niyang River can be predicted using classification and regression trees (CART) annalysis, which suggests that the total abundance and Shannon-Wiener diversity index would be higher when the elevation is above 3 308 m. On the other hand, the Shannon-Wiener diversity index and Pielou's evenness index would be lower when pH and ammoniacal nitrogen have lower or higher values. Finally yet importantly, close attention should be paid to periphytic protozoa and its environment to ensure sustainable development of

  13. Spatio-temporal modelling and assessment of within-species phenological variability using thermal time methods

    Science.gov (United States)

    Thompson, R.; Clark, R. M.

    2006-05-01

    Phenological observations of flowering date, budding date or senescence provide very valuable time series. They hold out the prospect for relating plant growth to environmental and climatic factors and hence for engendering a better understanding of plant physiology under natural conditions. The statistical establishment of associations between time series of phenological data and climatic factors provides a means of aiding forecasts of the biological impacts of future climatic change. However, it must be kept in mind that plant growth and behaviour vary spatially as well as temporally. Environmental, climatic and genetic diversity can give rise to spatially structured variation on a range of scales. The variations extend from large-scale geographical (clinal) trends, through medium-scale population and sub-population fluctuations, to micro-scale differentiation among neighbouring plants, where spatially close individuals are found to be genetically more alike than those some distance apart. We developed spatio-temporal phenological models that allow observations from multiple locations to be analysed simultaneously. We applied the models to the first-flowering dates of Prunus padus and Tilia cordata from localities as far apart as Norway and the Caucasus. Our growing-degree-day approach yielded a good fit to the available phenological data and yet involved only a small number of model parameters. It indicated that plants should display different sensitivities to temperature change according to their geographical location and the time of year at which they flower. For spring-flowering plants, we found strong temperature sensitivities for islands and archipelagos with oceanic climates, and low sensitivities in the interiors of continents.

  14. Spatio-temporal characteristics of Agulhas leakage: a model inter-comparison study

    Science.gov (United States)

    Holton, L.; Deshayes, J.; Backeberg, B. C.; Loveday, B. R.; Hermes, J. C.; Reason, C. J. C.

    2016-05-01

    Investigating the variability of Agulhas leakage, the volume transport of water from the Indian Ocean to the South Atlantic Ocean, is highly relevant due to its potential contribution to the Atlantic Meridional Overturning Circulation as well as the global circulation of heat and salt and hence global climate. Quantifying Agulhas leakage is challenging due to the non-linear nature of this process; current observations are insufficient to estimate its variability and ocean models all have biases in this region, even at high resolution . An Eulerian threshold integration method is developed to examine the mechanisms of Agulhas leakage variability in six ocean model simulations of varying resolution. This intercomparison, based on the circulation and thermohaline structure at the Good Hope line, a transect to the south west of the southern tip of Africa , is used to identify features that are robust regardless of the model used and takes into account the thermohaline biases of each model. When determined by a passive tracer method, 60 % of the magnitude of Agulhas leakage is captured and more than 80 % of its temporal fluctuations, suggesting that the method is appropriate for investigating the variability of Agulhas leakage. In all simulations but one, the major driver of variability is associated with mesoscale features passing through the section. High resolution ({<} 1/10°) hindcast models agree on the temporal (2-4 cycles per year) and spatial (300-500 km) scales of these features corresponding to observed Agulhas Rings. Coarser resolution models ({<} 1/4°) reproduce similar time scale of variability of Agulhas leakage in spite of their difficulties in representing the Agulhas rings properties. A coarser resolution climate model (2°) does not resolve the spatio-temporal mechanism of variability of Agulhas leakage. Hence it is expected to underestimate the contribution of Agulhas Current System to climate variability.

  15. Spatio-Temporal Characteristics in the Clearness Index Derived from Global Solar Radiation Observations in Korea

    Directory of Open Access Journals (Sweden)

    Yeonjin Jung

    2016-04-01

    Full Text Available The spatio-temporal characteristics of the clearness index (KT were investigated using daily global solar irradiance measurements (290–2800 nm for the period of 2000–2014 at 21 sites in Korea, a complex region in East Asia with a distinct monsoon season and heavy aerosol loading year-round. The annual mean KT value for all sites is 0.46, with values of 0.63 and 0.25 for clear and overcast skies, respectively. The seasonal variations in monthly average KT show a minimum of 0.37 in July at all sites except for Jeju, where the value was 0.29 in January. The maximum value (KT = 0.51 is observed in October, followed by a secondary peak (KT = 0.49 during February–April. The lowest KT value (KT = 0.42 was observed at both the Seoul and Jeju sites, and the highest (KT = 0.48 in the southeastern regions. Increases in average KT exceeding 4% per decade were observed in the middle and southeastern regions, with the maximum (+8% per decade at the Daegu site. Decreasing trends (<−4% per decade were observed in the southwestern regions, with the maximum (−7% per decade at the Mokpo site. Cloud amount, relative humidity, and aerosol optical depth together explained 57% of the variance in daily mean KT values. The contributions of these three variables to variations in KT are 42%, 9% and 6%, respectively. Thus, the variations in KT in Korea can be primarily attributed to the presence of clouds and water vapor, with relatively weak aerosol effects.

  16. Spatio-temporal variation of drought in China during 1961-2012: A climatic perspective

    Science.gov (United States)

    Xu, Kai; Yang, Dawen; Yang, Hanbo; Li, Zhe; Qin, Yue; Shen, Yan

    2015-07-01

    Understanding the spatial and temporal variation of drought is essentially important in drought assessment. In most previous studies, drought event is usually identified in space and time separately, ignoring the nature of the dynamic processes. In order to better understand how drought changes have taken place in China during the past half-century, we carried out a comprehensive analysis of their spatio-temporal variation based on multiple drought indices from a climatic perspective. A 3-dimensional clustering method is developed to identify drought events in China from 1961 to 2012 based on the 0.25° gridded indices of SPI3 (3 months Standardized Precipitation Index), RDI3 (3 months Reconnaissance Drought Index) and SPEI3 (3 months Standardized Precipitation Evapotranspiration Index). Drought events are further characterized by five parameters: duration, affected area, severity, intensity, and centroid. Remotely sensed soil moisture data were used to validate the rationality of identified drought events. The results show that the two most severe drought events in the past half century which occurred in the periods 1962-1963 and 2010-2011 swept more than half of the non-arid regions in China. Large magnitude droughts were usually centered in the region from North China Plain to the downstream of Yangtze River. The western part of North China Plain, Loess Plateau, Sichuan Basin and Yunnan-Guizhou Plateau had a significant drying trend, which is mainly caused by the significant decrease of precipitation. The three drought indices have almost the same performance in the humid regions, while SPI and RDI were found to be more appropriate than SPEI in the arid regions.

  17. Spatio-temporal seasonal drought patterns in Europe from 1950 to 2015

    Science.gov (United States)

    Spinoni, Jonathan; Naumann, Gustavo; Vogt, Jürgen

    2016-04-01

    Drought is one of the natural disasters with severe impacts in Europe, not only in areas which frequently experience water scarcity such as the Mediterranean, but also in temperate or continental climates such as Central and Eastern Europe and even in cold regions such as Scandinavia and Iceland. In this study the spatio-temporal patterns of seasonal meteorological droughts in Europe between 1950 and 2015 are investigated using the Standardized Precipitation Index (SPI) and the Standardized Precipitation-Evapotranspiration Index (SPEI). Since the focus is on the analysis of seasonal drought trends, indicators were calculated for 3 monthly accumulation periods. The input variables of precipitation and temperature were derived from E-OBS grids (v11-v12) at a spatial resolution of 0.25°x0.25°. Seasonal trends of drought frequency and severity were analyzed for moderate (SPI or SPEI SPEI droughts in Northern Europe and Russia, especially in winter and spring; oppositely, an increasing trend is visible in Southern Europe, mainly in spring and summer. According to the SPEI analysis (precipitation and temperature driven) Northern Europe shows wetting patterns, while Southern and Eastern Europe show a more remarkable drying tendency, especially in summer and autumn for drought frequency and in every season for drought severity. The evolution towards drier conditions is more relevant from 1981 onwards, both in terms of frequency and severity. This is especially true for Central Europe in spring, for the Mediterranean in summer, and for Eastern Europe in autumn. Extreme events follow similar patterns, but in autumn no spatially coherent trend can be found.

  18. Spatio-Temporal Variation and Monsoon Effect on the Temperature Lapse Rate of a Subtropical Island

    Directory of Open Access Journals (Sweden)

    Ching-An Chiu

    2014-01-01

    Full Text Available Temperature lapse rate (TLR has been widely used in the prediction of mountain climate and vegetation and in many ecological models. The aims of this paper are to explore the spatio-temporal variations and monsoon effects on the TLR in the subtropical island of Taiwan with its steep Central Mountain Region (CMR. A TLR analysis using the 32-year monthly mean air temperatures and elevations from 219 weather stations (sea level to 3852 m a.s.l. was performed based on different geographical regions and monsoon exposures. The results revealed that the average TLR for all of Taiwan is -5.17°C-5.17°C km-1, with a general tendency to be steeper in summer and shallower in winter. The results are also shallower than the typical or global average TLR of -6.5°C-6.5°C km-1. During the prevailing northeast monsoon season (winter, the TLR exhibits a contrast between the windward side (steeper, -5.97°C-5.97°C km-1 and the leeward side (shallower, -4.51°C-4.51°C km-1. From the diagnosis on spatial characteristics of monthly cloud amount and vertical atmospheric profiles, this contrasting phenomenon may be explained by the warming effect of onshore stratus clouds (500 - 2500 m depth on cold and dry Siberian monsoon air on the windward side of the CMR. On the southwestern leeward side of the CMR, the low-level (1500 m, the weak ventilation atmosphere and temperature inversion make the TLR shallower than on the windward side.

  19. Wildlife in the Matrix: Spatio-Temporal Patterns of Herbivore Occurrence in Karnataka, India

    Science.gov (United States)

    Karanth, Krithi K.

    2016-01-01

    Wildlife reserves are becoming increasingly isolated from the surrounding human-dominated landscapes particularly in Asia. It is imperative to understand how species are distributed spatially and temporally in and outside reserves, and what factors influence their occurrence. This study surveyed 7500 km2 landscape surrounding five reserves in the Western Ghats to examine patterns of occurrence of five herbivores: elephant, gaur, sambar, chital, and pig. Species distributions are modeled spatio-temporally using an occupancy approach. Trained field teams conducted 3860 interview-based occupancy surveys in a 10-km buffer surrounding these five reserves in 2012. I found gaur and wild pig to be the least and most wide-ranging species, respectively. Elephant and chital exhibit seasonal differences in spatial distribution unlike the other three species. As predicted, distance to reserve, the reserve itself, and forest cover were associated with higher occupancy of all species, and higher densities of people negatively influenced occurrence of all species. Park management, species protection, and conflict mitigation efforts in this landscape need to incorporate temporal and spatial understanding of species distributions. All species are known crop raiders and conflict prone locations with resources (such as water and forage) have to be monitored and managed carefully. Wildlife reserves and adjacent areas are critical for long-term persistence and habitat use for all five herbivores and must be monitored to ensure wildlife can move freely. Such a large-scale approach to map and monitor species distributions can be adapted to other landscapes to identify and monitor critical habitats shared by people and wildlife.

  20. Disease mapping and spatio-temporal analysis: importance of expected-case computation criteria

    Directory of Open Access Journals (Sweden)

    Gonzalo López-Abente

    2014-11-01

    Full Text Available The municipal, spatial pattern of male stomach cancer mortality in Spain, spanning the period 1989-2008, was studied, comparing the results of depicting mortality using different expected-case computation methods in a spatial and spa- tio-temporal modelling context. Expected cases for each municipality were first calculated by two methods: (i using refer- ence rates for each 5-year period; and (ii using average reference rates for the overall period. This was visualised by two types of models: (i independent maps for each period based on the model proposed by Besag, York and Mollié; and (ii a series of maps over time based on a model with spatio-temporal interaction terms. An additional model, based on mortality rate ratios as an alternative to the traditional use of standardised mortality ratios, was also fitted. Integrated nested Laplace approximations were used as the Bayesian inference tool. The results show that, in general, the geographical pattern was maintained across the study period, and that the maps differed appreciably according to the method used to obtain the expected number of cases. While the use of average reference rates appears to be the most suitable choice where the aim is to study time trends by area, it may nevertheless mask the spatial pattern in situations where the time trend is very marked and the study period is long. When it comes to studying changes in the spatial pattern of stomach cancer mortality, we feel that it is most useful to plot independent maps by period and use the “local” rates for each period as reference in the com- putation of expected cases.

  1. Diffusive spatio-temporal noise in a first-passage time model for intracellular calcium release

    KAUST Repository

    Flegg, Mark B.

    2013-01-01

    The intracellular release of calcium from the endoplasmic reticulum is controlled by ion channels. The resulting calcium signals exhibit a rich spatio-temporal signature, which originates at least partly from microscopic fluctuations. While stochasticity in the gating transition of ion channels has been incorporated into many models, the distribution of calcium is usually described by deterministic reaction-diffusion equations. Here we test the validity of the latter modeling approach by using two different models to calculate the frequency of localized calcium signals (calcium puffs) from clustered IP3 receptor channels. The complexity of the full calcium system is here limited to the basic opening mechanism of the ion channels and, in the mathematical reduction simplifies to the calculation of a first passage time. Two models are then studied: (i) a hybrid model, where channel gating is treated stochastically, while calcium concentration is deterministic and (ii) a fully stochastic model with noisy channel gating and Brownian calcium ion motion. The second model utilises the recently developed two-regime method [M. B. Flegg, S. J. Chapman, and R. Erban, "The two-regime method for optimizing stochastic reaction-diffusion simulations," J. R. Soc., Interface 9, 859-868 (2012)] in order to simulate a large domain with precision required only near the Ca2+ absorbing channels. The expected time for a first channel opening that results in a calcium puff event is calculated. It is found that for a large diffusion constant, predictions of the interpuff time are significantly overestimated using the model (i) with a deterministic non-spatial calcium variable. It is thus demonstrated that the presence of diffusive noise in local concentrations of intracellular Ca2+ ions can substantially influence the occurrence of calcium signals. The presented approach and results may also be relevant for other cell-physiological first-passage time problems with small ligand concentration

  2. Spatio-temporal image correlation (STIC): new technology for evaluation of the fetal heart.

    Science.gov (United States)

    DeVore, G R; Falkensammer, P; Sklansky, M S; Platt, L D

    2003-10-01

    Spatio-temporal image correlation (STIC) is a new approach for clinical assessment of the fetal heart. It offers an easy to use technique to acquire data from the fetal heart and to aid in visualization with both two-dimensional and three-dimensional (3D) cine sequences. The acquisition is performed in two steps: first, images are acquired by a single, automatic volume sweep. Second, the system analyzes the image data according to their spatial and temporal domain and processes an online dynamic 3D image sequence that is displayed in a multiplanar reformatted cross-sectional display and/or a surface rendered display. The examiner can navigate within the heart, re-slice, and produce all of the standard image planes necessary for a comprehensive diagnosis. The advantages of STIC for use in evaluation of the fetal heart are as follows: the technique delivers a temporal resolution which corresponds to a B-mode frame rate of approximately 80 frames/s; it provides the examiner with an unlimited number of images for review; it allows for correlation between image planes that are perpendicular to the main image acquisition plane; it may shorten the evaluation time when complex heart defects are suspected; it enables the reconstruction of a 3D rendered image that contains depth and volume which may provide additional information that is not available from the thin multiplanar image slices (e.g. for pulmonary veins, septal thickness); it lends itself to storage and review of volume data by the examiner or by experts at a remote site; it provides the examiner with the ability to review all images in a looped cine sequence. PMID:14528474

  3. Spatio-temporal radiation biology with conventionally or laser-accelerated particles for ELIMED

    Energy Technology Data Exchange (ETDEWEB)

    Ristić-Fira, A.; Bulat, T.; Keta, O.; Petrović, I. [Vinča Institute of Nuclear Sciences, University of Belgrade, P.O. Box 522, 11001 Belgrade (Serbia); Romano, F.; Cirrone, P.; Cuttone, G. [Istituto Nazionale di Fisica Nucleare, Laboratori Nazionali del Sud, via S. Sofia 62, Catania (Italy)

    2013-07-26

    The aim of this study is to investigate the behavior of radio-resistant human malignant cells, thus enabling better understanding of radiobiological effects of ions in such a case. Radiation sources such as accelerated continuous ion beams and laser technology-based ultra short radiation sources with energy of around 10 MeV will be used. The HTB140 melanoma cells are chosen since it has been shown that they represent the limit case of cellular radio-resistance among the studied tumor cell lines. These cells are particularly interesting as they provide data on the very edge of inactivation capacity of each beam line that is tested. After exposing the cell monolayers to continuous radiations of low (γ-rays) and high (protons) linear energy transfer, the kinetics of disappearance of the phosphorylated histone H2AX (γ-H2AX) foci per cell will be determined. The same procedure will be performed with the pulsed high dose rate protons. Detection and quantification of γ-H2AX foci will be performed by immunohistochemical 3D time-dependent imaging analyses using laser scanning confocal microscopy. Immunoblotting will enable the follow-up of the relation between γ-H2AX and cell cycle arrest via the p53/p21 pathway. In such a way the spatio-temporal changes on sub-cellular level will be visualized, quantified and compared. These results will show whether there is a difference in the effects on cells between continuous and pulsed irradiation mode. Therefore, they will contribute to the data base that might promote pulsed sources for medical treatments of malignant growths.

  4. Swim-training changes the spatio-temporal dynamics of skeletogenesis in zebrafish larvae (Danio rerio).

    Science.gov (United States)

    Fiaz, Ansa W; Léon-Kloosterziel, Karen M; Gort, Gerrit; Schulte-Merker, Stefan; van Leeuwen, Johan L; Kranenbarg, Sander

    2012-01-01

    Fish larvae experience many environmental challenges during development such as variation in water velocity, food availability and predation. The rapid development of structures involved in feeding, respiration and swimming increases the chance of survival. It has been hypothesized that mechanical loading induced by muscle forces plays a role in prioritizing the development of these structures. Mechanical loading by muscle forces has been shown to affect larval and embryonic bone development in vertebrates, but these investigations were limited to the appendicular skeleton. To explore the role of mechanical load during chondrogenesis and osteogenesis of the cranial, axial and appendicular skeleton, we subjected zebrafish larvae to swim-training, which increases physical exercise levels and presumably also mechanical loads, from 5 until 14 days post fertilization. Here we show that an increased swimming activity accelerated growth, chondrogenesis and osteogenesis during larval development in zebrafish. Interestingly, swim-training accelerated both perichondral and intramembranous ossification. Furthermore, swim-training prioritized the formation of cartilage and bone structures in the head and tail region as well as the formation of elements in the anal and dorsal fins. This suggests that an increased swimming activity prioritized the development of structures which play an important role in swimming and thereby increasing the chance of survival in an environment where water velocity increases. Our study is the first to show that already during early zebrafish larval development, skeletal tissue in the cranial, axial and appendicular skeleton is competent to respond to swim-training due to increased water velocities. It demonstrates that changes in water flow conditions can result into significant spatio-temporal changes in skeletogenesis.

  5. Spatio-temporal dynamics of cholera during the first year of the epidemic in Haiti.

    Directory of Open Access Journals (Sweden)

    Jean Gaudart

    Full Text Available BACKGROUND: In October 2010, cholera importation in Haiti triggered an epidemic that rapidly proved to be the world's largest epidemic of the seventh cholera pandemic. To establish effective control and elimination policies, strategies rely on the analysis of cholera dynamics. In this report, we describe the spatio-temporal dynamics of cholera and the associated environmental factors. METHODOLOGY/PRINCIPAL FINDINGS: Cholera-associated morbidity and mortality data were prospectively collected at the commune level according to the World Health Organization standard definition. Attack and mortality rates were estimated and mapped to assess epidemic clusters and trends. The relationships between environmental factors were assessed at the commune level using multivariate analysis. The global attack and mortality rates were 488.9 cases/10,000 inhabitants and 6.24 deaths/10,000 inhabitants, respectively. Attack rates displayed a significantly high level of spatial heterogeneity (varying from 64.7 to 3070.9 per 10,000 inhabitants, thereby suggesting disparate outbreak processes. The epidemic course exhibited two principal outbreaks. The first outbreak (October 16, 2010-January 30, 2011 displayed a centrifugal spread of a damping wave that suddenly emerged from Mirebalais. The second outbreak began at the end of May 2011, concomitant with the onset of the rainy season, and displayed a highly fragmented epidemic pattern. Environmental factors (river and rice fields: p<0.003 played a role in disease dynamics exclusively during the early phases of the epidemic. CONCLUSION: Our findings demonstrate that the epidemic is still evolving, with a changing transmission pattern as time passes. Such an evolution could have hardly been anticipated, especially in a country struck by cholera for the first time. These results argue for the need for control measures involving intense efforts in rapid and exhaustive case tracking.

  6. Spatio-temporal modelling of informal settlement development in Sancaktepe district, Istanbul, Turkey

    Science.gov (United States)

    Dubovyk, Olena; Sliuzas, Richard; Flacke, Johannes

    In less developed countries, the recent high rates of urban expansion are often associated with the emergence of informal settlements that may exaggerate social and environmental problems and impede sustainable development. An enhanced understanding of informal development may, therefore, be a key for future success in its effective management. This paper explores the possibilities offered by progress in Geo-Information Science and spatial modelling to improve understanding of informal settlement development through comprehensive spatio-temporal analyses. First, it investigates spatial and temporal patterns of the growth of the informal settlements in Sancaktepe district of Istanbul between 1990 and 2005. Second, using a logistic regression model, an analysis of the driving forces of informal development and prediction of probable locations of new informal settlements are performed. A list of spatial factors that are correlated to informal development is compiled and used to build six logistic regression models for different time steps between 1990 and 2005. Population density, slope, and proportion of informal settlements in the neighbourhood were found to be the main predictors influencing the spatial development of informal settlements during the study period. The performance of the models is evaluated and validated to identify those which best explain the informal development in the study area. As a result, three models built for 1990-1995 and 1995-2000 were selected to generate probability maps of informal settlement development, showing the likelihood for each location to be informally developed in the future. These results can be used as a basis for the evaluation of the process of informal development in other parts of Istanbul, as well as in other cities and countries. At the same time, the technique may serve as a decision-making tool for urban planners and policy makers.

  7. Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging.

    Directory of Open Access Journals (Sweden)

    Karin Gorzolka

    Full Text Available MALDI mass spectrometry imaging was performed to localize metabolites during the first seven days of the barley germination. Up to 100 mass signals were detected of which 85 signals were identified as 48 different metabolites with highly tissue-specific localizations. Oligosaccharides were observed in the endosperm and in parts of the developed embryo. Lipids in the endosperm co-localized in dependency on their fatty acid compositions with changes in the distributions of diacyl phosphatidylcholines during germination. 26 potentially antifungal hordatines were detected in the embryo with tissue-specific localizations of their glycosylated, hydroxylated, and O-methylated derivates. In order to reveal spatio-temporal patterns in local metabolite compositions, multiple MSI data sets from a time series were analyzed in one batch. This requires a new preprocessing strategy to achieve comparability between data sets as well as a new strategy for unsupervised clustering. The resulting spatial segmentation for each time point sample is visualized in an interactive cluster map and enables simultaneous interactive exploration of all time points. Using this new analysis approach and visualization tool germination-dependent developments of metabolite patterns with single MS position accuracy were discovered. This is the first study that presents metabolite profiling of a cereals' germination process over time by MALDI MSI with the identification of a large number of peaks of agronomically and industrially important compounds such as oligosaccharides, lipids and antifungal agents. Their detailed localization as well as the MS cluster analyses for on-tissue metabolite profile mapping revealed important information for the understanding of the germination process, which is of high scientific interest.

  8. Lung diaphragm tracking in CBCT images using spatio-temporal MRF.

    Science.gov (United States)

    Sundarapandian, Manivannan; Kalpathi, Ramakrishnan; Siochi, R Alfredo C; Kadam, Amrut S

    2016-10-01

    In EBRT in order to monitor the intra fraction motion of thoracic and abdominal tumors, one of the standard approaches is to use the lung diaphragm apex as an internal marker. However, tracking the position of the apex from image based observations is a challenging problem, as it undergoes both position and shape variation. The purpose of this paper is to propose an alternative method for tracking the ipsi-lateral hemidiaphragm apex (IHDA) position on Cone Beam Computed Tomography (CBCT) projection images. A hierarchical method is proposed to track the IHDA position across the frames. The diaphragm state is modeled as a spatio-temporal Markov Random Field (MRF). The likelihood function is derived from the votes based on 4D-Hough space. The optimal state of the diaphragm is obtained by solving the associated energy minimization problem using graph-cuts. A heterogeneous GPU implementation is provided for the method using CUDA framework and the performance is compared with that of CPU implementation. The method was tested using 15 clinical CBCT images. The results demonstrate that the MRF formulation outperforms the full search method in terms of accuracy. The GPU based heterogeneous implementation of the proposed algorithm takes about 25s, which is 16% improvement over the existing benchmark. The proposed MRF formulation considers all the possible combinations from the 4D-Hough space and therefore results in better tracking accuracy. The GPU based implementation exploits the inherent parallelism in our algorithm to accelerate the performance thereby increasing the viability of the approach for clinical use. PMID:27471097

  9. Spatio-Temporal Characteristics of Rural Economic Development in Eastern Coastal China

    Directory of Open Access Journals (Sweden)

    Guogang Wang

    2015-01-01

    Full Text Available Although the regional differences of rural economic development can be easily determined, a challenging problem for research studies regarding rural economic development has been the inter-relatedness between different areas, and this challenge has been noted remarkably little in research data to date. As an empirical investigation, this study analyzes the spatio-temporal characteristics of rural economic development from a period beginning in 1978 to the year 2012, in the eastern coastal region of China. In order to determine the special differentiation characteristics of rural economic development, three indexes, namely the Gini coefficient (G, Tsui–Wang index (TW and Theil index (T, were employed. To explore the inter-relatedness among the different areas, we selected a spatial autocorrelation model. The results indicated that, to a large extent, rural economic development from 1978 to 2012 in the eastern coastal region of China was greatly influenced, and the per capita annual net income changed significantly, due to the process of rapid urbanization and industrialization. Generally speaking, the annual net income constantly increased, from 87.7 USD in 1978 to 1628.1 USD in 2012. However, the calculation results indicated that the per capita income gap in the same province decreased, while the gap between the provinces presented an aggregate trend. The regional polarization widened continuously. It was also found that the spatial positive autocorrelation for the regional economy was significant, with a waving and ascending trend, and the neighbor effect of regional economic growth was continuously strengthened. Qualitative analysis of the driving mechanism was applied, and it was determined that there are three primary factors affecting the development of the rural regions, namely resource endowments, economic location and policies.

  10. Photonic crystal ring resonator based optical filters for photonic integrated circuits

    Energy Technology Data Exchange (ETDEWEB)

    Robinson, S., E-mail: mail2robinson@gmail.com [Department of Electronics and Communication Engineering, Mount Zion College of Engineering and Technology, Pudukkottai-622507, Tamil Nadu (India)

    2014-10-15

    In this paper, a two Dimensional (2D) Photonic Crystal Ring Resonator (PCRR) based optical Filters namely Add Drop Filter, Bandpass Filter, and Bandstop Filter are designed for Photonic Integrated Circuits (PICs). The normalized output response of the filters is obtained using 2D Finite Difference Time Domain (FDTD) method and the band diagram of periodic and non-periodic structure is attained by Plane Wave Expansion (PWE) method. The size of the device is minimized from a scale of few tens of millimeters to the order of micrometers. The overall size of the filters is around 11.4 μm × 11.4 μm which is highly suitable of photonic integrated circuits.

  11. The Ecuadorian Artisanal Fishery for Large Pelagics: Species Composition and Spatio-Temporal Dynamics.

    Directory of Open Access Journals (Sweden)

    Jimmy Martínez-Ortiz

    Full Text Available The artisanal fisheries of Ecuador operate within one of the most dynamic and productive marine ecosystems of the world. This study investigates the catch composition of the Ecuadorian artisanal fishery for large pelagic fishes, including aspects of its spatio-temporal dynamics. The analyses of this study are based on the most extensive dataset available to date for this fishery: a total of 106,963 trip-landing inspection records collected at its five principal ports during 2008 ‒ 2012. Ecuadorian artisanal fisheries remove a substantial amount of biomass from the upper trophic-level predatory fish community of the eastern tropical Pacific Ocean. It is estimated that at least 135 thousand metric tons (mt (about 15.5 million fish were landed in the five principal ports during the study period. The great novelty of Ecuadorian artisanal fisheries is the "oceanic-artisanal" fleet component, which consists of mother-ship (nodriza boats with their towed fiber-glass skiffs (fibras operating with pelagic longlines. This fleet has fully expanded into oceanic waters as far offshore as 100°W, west of the Galapagos Archipelago. It is estimated that nodriza operations produce as much as 80% of the total catches of the artisanal fishery. The remainder is produced by independent fibras operating in inshore waters with pelagic longlines and/or surface gillnets. A multivariate regression tree analysis was used to investigate spatio-environmental effects on the nodriza fleet (n = 6,821 trips. The catch species composition of the nodriza fleet is strongly influenced by the northwesterly circulation of the Humboldt Current along the coast of Peru and its associated cold waters masses. The target species and longline gear-type used by nodrizas change seasonally with the incursion of cool waters (< 25°C from the south and offshore. During this season, dolphinfish (Coryphaena hippurus dominates the catches. However, in warmer waters, the fishery changes to tuna

  12. Fusion of spatio-temporal UAV and proximal sensing data for an agricultural decision support system

    Science.gov (United States)

    Katsigiannis, P.; Galanis, G.; Dimitrakos, A.; Tsakiridis, N.; Kalopesas, C.; Alexandridis, T.; Chouzouri, A.; Patakas, A.; Zalidis, G.

    2016-08-01

    Over the last few years, multispectral and thermal remote sensing imagery from unmanned aerial vehicles (UAVs) has found application in agriculture and has been regarded as a means of field data collection and crop condition monitoring source. The integration of information derived from the analysis of these remotely sensed data into agricultural management applications facilitates and aids the stakeholder's decision making. Whereas agricultural decision support systems (DSS) have long been utilised in farming applications, there are still critical gaps to be addressed; as the current approach often neglects the plant's level information and lacks the robustness to account for the spatial and temporal variability of environmental parameters within agricultural systems. In this paper, we demonstrate the use of a custom built autonomous UAV platform in providing critical information for an agricultural DSS. This hexacopter UAV bears two cameras which can be triggered simultaneously and can capture both the visible, near-infrared (VNIR) and the thermal infrared (TIR) wavelengths. The platform was employed for the rapid extraction of the normalized difference vegetation index (NDVI) and the crop water stress index (CWSI) of three different plantations, namely a kiwi, a pomegranate, and a vine field. The simultaneous recording of these two complementary indices and the creation of maps was advantageous for the accurate assessment of the plantation's status. Fusion of UAV and soil scanner system products pinpointed the necessity for adjustment of the irrigation management applied. It is concluded that timely CWSI and NDVI measures retrieved for different crop growing stages can provide additional information and can serve as a tool to support the existing irrigation DSS that had so far been exclusively based on telemetry data from soil and agrometeorological sensors. Additionally, the use of the multi-sensor UAV was found to be beneficial in collecting timely, spatio-temporal

  13. Spatio-temporal variation of water flow and sediment discharge in the Mahanadi River, India

    Science.gov (United States)

    Bastia, Fakira; Equeenuddin, Sk. Md.

    2016-09-01

    The transport of sediments by rivers to the oceans represents an important link between the terrestrial and marine ecosystem. Therefore, this work aims to study spatio-temporal variation of the sediment discharge and erosion rate in the Mahanadi river, one of the biggest rivers in India, over past three decades vis-à-vis their controlling factors. To understand the sediment load variation, the trend analysis in the time series data of rainfall, water and sediment discharge of the Mahanadi river were also attempted. The non-parametric Mann-Kendall and Sen's methods were used to determine whether there was a positive or negative trend in the time series data with their statistical significance. The occurrence of abrupt changes was detected using Pettitt test. The trend test result represents that sediment load delivered from the Mahanadi river to the global ocean has decreased sharply at the rate of 0.515 × 106 tons/year between 1980 and 2010. Water discharge and rainfall in the basin showed no significant decreasing trend except at only one tributary. The decline in sediment discharge from the basin to the Bay of Bengal is mainly due to the increase in the number of dams, which has recorded the increase from 70 to 253 during the period of 1980 to 2010. Over the past 30 years the Mahanadi river has discharged about 49.0 ± 20.5 km3 of water and 17.4 ± 12.7 × 106 tons of sediment annually to the Bay of Bengal whereas the mean erosional rate is 265 ± 125 tons/km2/year over the period of 30 years in the basin. Based on the current data (2000-2001 to 2009-2010), sediment flux and water discharge to the ocean are 12 ± 5 × 106 tons/year and 49 ± 16 km3/year respectively; and ranking Mahanadi river second in terms of water discharge and sediment flux to the ocean among the peninsular rivers in India.

  14. Modelling natural grass production and its spatio-temporal variations in a semiarid Mediterranean watershed

    Science.gov (United States)

    Schnabel, Susanne; Lozano-Parra, Javier; Maneta-López, Marco

    2014-05-01

    Natural grasses are found in semiarid rangelands with disperse tree cover of part of the Iberian Peninsula and constitute a resource with high ecologic and economic value worth, being an important source of food for livestock, playing a significant role in the hydrologic cycle, controlling the soil thermal regime, and are a key factor in reducing soil erosion and degradation. However, increasing pressure on the resources, changes in land use as well as possible climate variations threaten the sustainability of natural grasses. Despite of their importance, the spatio-temporal variations of pasture production over whole watersheds are poorly known. In this sense, previous studies by other authors have indicated its dependence on a balance of positive and negative effects brought about by the main limiting factors: water, light, nutrients and space. Nevertheless, the specific weight of each factor is not clear because they are highly variable due to climate characteristics and the structure of these agroforestry systems. We have used a physical spatially-distributed ecohydrologic model to investigate the specific weight of factors that contribute to pasture production in a semiarid watershed of 99.5 ha in western Spain. This model couples a two layer (canopy and understory) vertical local closure energy balance scheme, a hydrologic model and a carbon uptake and vegetation growth component, and it was run using a synthetic daily climate dataset generated by a stochastic weather generator, which reproduced the range of climatic variations observed under mediterranean current climate. The modelling results reproduced satisfactorily the seasonality effects of climate as precipitation and temperatures, as well as annual and inter-annual variations of pasture production. Spatial variations of pasture production were largely controlled by topographic and tree effects, showing medium-low values depending of considered areas. These low values require introduction of feed to

  15. How geomorphology and groundwater level affect the spatio-temporal variability of riverine cold water patches?

    Science.gov (United States)

    Wawrzyniak, Vincent; Piégay, Hervé; Allemand, Pascal; Vaudor, Lise; Goma, Régis; Grandjean, Philippe

    2016-04-01

    . Nonetheless, amongst all patch types, some are quite stable over time, while others are transient. These results can be used to target areas with high densities of stable and spatially extensive cold water patches that are considered ecological refuges, in the context of pronounced low flow and a rise in water temperature. Key words: River temperature; Thermal Infrared (TIR) remote sensing; groundwater; fluvial geomorphic features; side channels; spatio-temporal variability; lower Ain River (France).

  16. Spatio-temporal patterns and factors controlling the hydrogeochemistry of the river Jhelum basin, Kashmir Himalaya.

    Science.gov (United States)

    Mir, Riyaz Ahmad; Jeelani, Gh; Dar, Farooq Ahmad

    2016-07-01

    River Jhelum is a major source of water for growing population and irrigation in the Kashmir Himalaya. The region is trending towards water scarcity as well as quality deterioration stage due to its highly unregulated development. The existence of few literature on various aspects of the basin prompts us to study the spatio-temporal variability of its physicochemical parameters and thereby to understand the regulating hydrogeochemical mechanisms based on 50 samples collected during high flow (June 2008) and low flow (January 2009) periods. The water chemistry exhibited significant spatial variability reflecting the mixing processes in the basin. The seasonal effect does change the concentration of ions significantly with modest variability in the order of ionic abundance. The Ca(2+) ion among cations and HCO3 (-) ion among anions dominate the ionic budget and correlates significantly with the diverse lithology of the basin. Three major water types, i.e., Ca-Mg-HCO3 (72 %), Ca-HCO3 (12 %), and Mg-Ca-HCO3 (16 %), suggest that the chemical composition of water is dominantly controlled by carbonate lithology, besides a significant contribution from silicates. However, at certain sites, the biological processes and anthropogenic activities play a major role. Relatively, the lower ionic concentration during high flow period (summer season) suggested the significant influence of higher discharge via dilution effect. The higher discharge due to higher rainfall and snow melting in response to rising temperature in this period leads to strong flushing of human and agricultural wastes into the river. The factor analysis also reflected the dominant control of varied lithology and anthropogenic sources on the water quality based on the four significant factors explaining collectively about 70-81 % of the total data variance. A two-member chloride mixing model used to estimate the discharge contribution of tributaries to the main river channel showed reliable results. It may

  17. Spatio-temporal Dynamics of Sources of Hard X-Ray Pulsations in Solar Flares

    Science.gov (United States)

    Kuznetsov, S. A.; Zimovets, I. V.; Morgachev, A. S.; Struminsky, A. B.

    2016-09-01

    We present a systematic analysis of the spatio-temporal evolution of sources of hard X-ray (HXR) pulsations in solar flares. We concentrate on disk flares whose impulsive phases are accompanied by a series of more than three successive peaks (pulsations) of HXR emission detected in the RHESSI 50 - 100 keV energy channel with a four-second time cadence. Twenty-nine such flares observed from February 2002 to June 2015 with characteristic time differences between successive peaks P ≈8 - 270 s are studied. The main observational result of the analysis is that sources of HXR pulsations in all flares are not stationary, they demonstrate apparent movements or displacements in the parent active regions from pulsation to pulsation. The flares can be subdivided into two main groups depending on the character of the dynamics of the HXR sources. Group 1 consists of 16 flares ( 55~%) that show systematic dynamics of the HXR sources from pulsation to pulsation with respect to a magnetic polarity inversion line (MPIL), which has a simple extended trace on the photosphere. Group 2 consists of 13 flares ( 45~%) that show more chaotic displacements of the HXR sources with respect to an MPIL with a more complex structure, and sometimes several MPILs are present in the parent active regions of such flares. Based on the observations, we conclude that the mechanism of the flare HXR pulsations (at least with time differences of the considered range) is related to successive triggering of the flare energy release process in different magnetic loops (or bundles of loops) of the parent active regions. Group 1 flare regions consist of loops stacked into magnetic arcades that are extended along MPILs. Group 2 flare regions have more complex magnetic structures, and the loops are arranged more chaotically and randomly there. We also found that at least 14 ( 88~%) group 1 flares and 11 ( 85~%) group 2 flares are accompanied by coronal mass ejections (CMEs), i.e. the absolute majority of the

  18. Spatio-temporal responses of cropland phenophases to climate change in Northeast China

    Institute of Scientific and Technical Information of China (English)

    LI Zhengguo; TANG Huajun; YANG Peng; WU Wenbin; CHEN Zhongxin; ZHOU Qingbo; ZHANG Li; ZOU Jinqiu

    2012-01-01

    We investigated the responses of cropland phenophases to changes of agricultural thermal conditions in Northeast China using the SPOT-VGT Normalized Difference Vegetation Index (NDVI) ten-day-composed time-series data,observed crop phenophases and the climate data collected from 1990 to 2010.First,the phenological parameters,such as the dates of onset-of-growth,peak-of-growth and end-of-growth as well as the length of the growing season,were extracted from the smoothed NVDI time-series dataset and showed an obvious correlation with the observed crop phenophases,including the stages of seedling,heading,maturity and the length of the growth period.Secondly,the spatio-temporal trends of the major thermal conditions (the first date of ≥10℃,the first frost date,the length of the temperature-allowing growth period and the accumulated temperature (AT) of ≥10℃) in Northeast China were illustrated and analyzed over the past 20 years.Thirdly,we focused on the responses of cropland phenophases to the thermal conditions changes.The results showed that the onset-of-growth date had an obvious positive correlation with the first date of ≥ 10℃ (P < 0.01),especially in the northern part of the Songnen Plain,the eastern part of the Sanjiang Plain and the middle and eastern parts of Jilin Province.For the extracted length of growing season and the observed growth period,notable correlations were found in almost same regions (P < 0.05).However,there was no obvious correlation between the end-of-growth date and the first frost date in the study area.Opposite correlations were observed between the length of the growing season and the AT of ≥10℃.In the northern part of the Songnen Plain,the eastern part of the Sanjiang Plain and the middle part of Jilin and Liaoning Provinces,the positive correlation coefficients were higher than the critical value of 0.05,whereas the negative correlation coefficients reached a level of 0.55 (P < 0.05) in the middle and southern

  19. Spatio-Temporal Patterns of Demyelination and Remyelination in the Cuprizone Mouse Model.

    Directory of Open Access Journals (Sweden)

    Ian Tagge

    Full Text Available Cuprizone administration in mice provides a reproducible model of demyelination and spontaneous remyelination, and has been useful in understanding important aspects of human disease, including multiple sclerosis. In this study, we apply high spatial resolution quantitative MRI techniques to establish the spatio-temporal patterns of acute demyelination in C57BL/6 mice after 6 weeks of cuprizone administration, and subsequent remyelination after 6 weeks of post-cuprizone recovery. MRI measurements were complemented with Black Gold II stain for myelin and immunohistochemical stains for associated tissue changes. Gene expression was evaluated using the Allen Gene Expression Atlas. Twenty-five C57BL/6 male mice were split into control and cuprizone groups; MRI data were obtained at baseline, after 6 weeks of cuprizone, and 6 weeks post-cuprizone. High-resolution (100 μm isotropic whole-brain coverage magnetization transfer ratio (MTR parametric maps demonstrated concurrent caudal-to-rostral and medial-to-lateral gradients of MTR decrease within corpus callosum (CC that correlated well with demyelination assessed histologically. Our results show that demyelination was not limited to the midsagittal line of the corpus callosum, and also that opposing gradients of demyelination occur in the lateral and medial CC. T2-weighted MRI gray/white matter contrast was strong at baseline, weak after 6 weeks of cuprizone treatment, and returned to a limited extent after recovery. MTR decreases during demyelination were observed throughout the brain, most clearly in callosal white matter. Myelin damage and repair appear to be influenced by proximity to oligodendrocyte progenitor cell populations and exhibit an inverse correlation with myelin basic protein gene expression. These findings suggest that susceptibility to injury and ability to repair vary across the brain, and whole-brain analysis is necessary to accurately characterize this model. Whole

  20. Spatio-Temporal Modelling of Dust Transport over Surface Mining Areas and Neighbouring Residential Zones

    Directory of Open Access Journals (Sweden)

    Eva Gulikova

    2008-06-01

    Full Text Available Projects focusing on spatio-temporal modelling of the living environment need to manage a wide range of terrain measurements, existing spatial data, time series, results of spatial analysis and inputs/outputs from numerical simulations. Thus, GISs are often used to manage data from remote sensors, to provide advanced spatial analysis and to integrate numerical models. In order to demonstrate the integration of spatial data, time series and methods in the framework of the GIS, we present a case study focused on the modelling of dust transport over a surface coal mining area, exploring spatial data from 3D laser scanners, GPS measurements, aerial images, time series of meteorological observations, inputs/outputs form numerical models and existing geographic resources. To achieve this, digital terrain models, layers including GPS thematic mapping, and scenes with simulation of wind flows are created to visualize and interpret coal dust transport over the mine area and a neighbouring residential zone. A temporary coal storage and sorting site, located near the residential zone, is one of the dominant sources of emissions. Using numerical simulations, the possible effects of wind flows are observed over the surface, modified by natural objects and man-made obstacles. The coal dust drifts with the wind in the direction of the residential zone and is partially deposited in this area. The simultaneous display of the digital map layers together with the location of the dominant emission source, wind flows and protected areas enables a risk assessment of the dust deposition in the area of interest to be performed. In order to obtain a more accurate simulation of wind flows over the temporary storage and sorting site, 3D laser scanning and GPS thematic mapping are used to create a more detailed digital terrain model. Thus, visualization of wind flows over the area of interest combined with 3D map layers enables the exploration of the processes of coal dust

  1. A Spatio-Temporal Enhancement Method for medium resolution LAI (STEM-LAI)

    Science.gov (United States)

    Houborg, Rasmus; McCabe, Matthew F.; Gao, Feng

    2016-05-01

    Satellite remote sensing has been used successfully to map leaf area index (LAI) across landscapes, but advances are still needed to exploit multi-scale data streams for producing LAI at both high spatial and temporal resolution. A multi-scale Spatio-Temporal Enhancement Method for medium resolution LAI (STEM-LAI) has been developed to generate 4-day time-series of Landsat-scale LAI from existing medium resolution LAI products. STEM-LAI has been designed to meet the demands of applications requiring frequent and spatially explicit information, such as effectively resolving rapidly evolving vegetation dynamics at sub-field (30 m) scales. In this study, STEM-LAI is applied to Moderate Resolution Imaging Spectroradiometer (MODIS) based LAI data and utilizes a reference-based regression tree approach for producing MODIS-consistent, but Landsat-based, LAI. The Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM) is used to interpolate the downscaled LAI between Landsat acquisition dates, providing a high spatial and temporal resolution improvement over existing LAI products. STARFM predicts high resolution LAI by blending MODIS and Landsat based information from a common acquisition date, with MODIS data from a prediction date. To demonstrate its capacity to reproduce fine-scale spatial features observed in actual Landsat LAI, the STEM-LAI approach is tested over an agricultural region in Nebraska. The implementation of a 250 m resolution LAI product, derived from MODIS 1 km data and using a scale consistent approach based on the Normalized Difference Vegetation Index (NDVI), is found to significantly improve accuracies of spatial pattern prediction, with the coefficient of efficiency (E) ranging from 0.77-0.94 compared to 0.01-0.85 when using 1 km LAI inputs alone. Comparisons against an 11-year record of in-situ measured LAI over maize and soybean highlight the utility of STEM-LAI in reproducing observed LAI dynamics (both characterized by r2 = 0.86) over a

  2. The spatio-temporal structure of electrostatic turbulence in the WEGA stellarator

    International Nuclear Information System (INIS)

    The main object of this work is to provide a detailed characterisation of electrostatic turbulence in WEGA and to identify the underlying instability mechanism driving turbulence. The spatio-temporal structure of turbulence is studied using multiple Langmuir probes providing a sufficiently high spatial and temporal resolution. Turbulence in WEGA is dominated by drift wave dynamics. The phase shift between density and potential fluctuations is close to zero, fluctuations are mainly driven by the density gradient, and the phase velocity of turbulent structures points in the direction of the electron diamagnetic drift. The structure of turbulence is studied mainly in the plasma edge region inside the last closed flux surface. WEGA can be operated in two regimes differing in the magnetic field strength by almost one order of magnitude (57 mT and 500 mT, respectively). At 57 mT large structures with a poloidal extent comparable to the machine dimensions are observed, whereas at 500 mT turbulent structures are much smaller. The poloidal structure size scales nearly linearly with the inverse magnetic field strength. This scaling may be argued to be related to the drift wave dispersion scale, ρs=√(mikBTe)/(qB). However, the structure size remains unchanged when the ion mass is changed by using different discharge gases. Inside the last closed flux surface the poloidal E x B drift in WEGA is negligible. The three-dimensional structure is studied in detail using probes which are toroidally separated but aligned along connecting magnetic field lines. A small but finite parallel wavenumber is found. The ratio between the average parallel and perpendicular wavenumber is in the order of anti κ parallel / anti κθ ∼ 10-2. The parallel phase velocity of turbulent structures is in-between the ion sound velocity and the Alfven velocity. In the parallel dynamics a fundamental difference between the two operational regimes at different magnetic field strength is found. At 500 m

  3. Numerical investigations of triggering mechanisms of shallow landslides due to heterogeneous spatio-temporal hydrological patterns.

    Science.gov (United States)

    Schwarz, Massimiliano; Cohen, Denis

    2016-04-01

    Rainfall is one of the major triggering factor of shallow landslide around the world. The increase of soil moisture in the soil influences the stability of a slope through the increase of soil bulk density, the reduction of soil apparent cohesion (due to suction stress), and the increase in pore water pressure.The spatio-temporal transformations of such properties of soil are know to be heterogeneous and under constant change. For instance, there may be a condition where, in cracked clay-soil, water, during a rain event, produces a rapid increase of pore water pressure along preferential flow-paths (crack or roots), while soil moisture and suction within the soil matrix change minimally. An another site in a sandy soil, the situation might be very different where the increase of soil moisture and pore water pressure, and the decrease of soil suction take place more or less simultaneously across the entire soil profile. In both of these cases topography plays a major role in determining the accumulation of water along the slope through different subsurface flows intensities and directions. In many documented cases in the Alps, shallow landslides may also be triggered by the punctual exfiltration of water from bedrock or weathered geological strata. The hydro-geological characteristics of the catchment control this mechanism. These different situations aim to give an idea of the large spectrum of hydrological triggering conditions of shallow landslides. The heterogeneities of these hydrological conditions represent a difficult issue in modeling shallow landslide triggering mechanisms. In the simplest models, hydrology is assumed to influence changes in pore water pressure only, mostly using one dimensional vertical infiltration models. More advanced models consider changes in apparent cohesion due to changes in soil moisture or include more complex hydrological models to simulate water flow and distribution during a rainfall event. However, most models at the

  4. Spatio-Temporal History of HIV-1 CRF35_AD in Afghanistan and Iran.

    Science.gov (United States)

    Eybpoosh, Sana; Bahrampour, Abbas; Karamouzian, Mohammad; Azadmanesh, Kayhan; Jahanbakhsh, Fatemeh; Mostafavi, Ehsan; Zolala, Farzaneh; Haghdoost, Ali Akbar

    2016-01-01

    HIV-1 Circulating Recombinant Form 35_AD (CRF35_AD) has an important position in the epidemiological profile of Afghanistan and Iran. Despite the presence of this clade in Afghanistan and Iran for over a decade, our understanding of its origin and dissemination patterns is limited. In this study, we performed a Bayesian phylogeographic analysis to reconstruct the spatio-temporal dispersion pattern of this clade using eligible CRF35_AD gag and pol sequences available in the Los Alamos HIV database (432 sequences available from Iran, 16 sequences available from Afghanistan, and a single CRF35_AD-like pol sequence available from USA). Bayesian Markov Chain Monte Carlo algorithm was implemented in BEAST v1.8.1. Between-country dispersion rates were tested with Bayesian stochastic search variable selection method and were considered significant where Bayes factor values were greater than three. The findings suggested that CRF35_AD sequences were genetically similar to parental sequences from Kenya and Uganda, and to a set of subtype A1 sequences available from Afghan refugees living in Pakistan. Our results also showed that across all phylogenies, Afghan and Iranian CRF35_AD sequences formed a monophyletic cluster (posterior clade credibility> 0.7). The divergence date of this cluster was estimated to be between 1990 and 1992. Within this cluster, a bidirectional dispersion of the virus was observed across Afghanistan and Iran. We could not clearly identify if Afghanistan or Iran first established or received this epidemic, as the root location of this cluster could not be robustly estimated. Three CRF35_AD sequences from Afghan refugees living in Pakistan nested among Afghan and Iranian CRF35_AD branches. However, the CRF35_AD-like sequence available from USA diverged independently from Kenyan subtype A1 sequences, suggesting it not to be a true CRF35_AD lineage. Potential factors contributing to viral exchange between Afghanistan and Iran could be injection drug

  5. Sensitivity Analysis of a Spatio-Temporal Avalanche Forecasting Model Based on Support Vector Machines

    Science.gov (United States)

    Matasci, G.; Pozdnoukhov, A.; Kanevski, M.

    2009-04-01

    The recent progress in environmental monitoring technologies allows capturing extensive amount of data that can be used to assist in avalanche forecasting. While it is not straightforward to directly obtain the stability factors with the available technologies, the snow-pack profiles and especially meteorological parameters are becoming more and more available at finer spatial and temporal scales. Being very useful for improving physical modelling, these data are also of particular interest regarding their use involving the contemporary data-driven techniques of machine learning. Such, the use of support vector machine classifier opens ways to discriminate the ``safe'' and ``dangerous'' conditions in the feature space of factors related to avalanche activity based on historical observations. The input space of factors is constructed from the number of direct and indirect snowpack and weather observations pre-processed with heuristic and physical models into a high-dimensional spatially varying vector of input parameters. The particular system presented in this work is implemented for the avalanche-prone site of Ben Nevis, Lochaber region in Scotland. A data-driven model for spatio-temporal avalanche danger forecasting provides an avalanche danger map for this local (5x5 km) region at the resolution of 10m based on weather and avalanche observations made by forecasters on a daily basis at the site. We present the further work aimed at overcoming the ``black-box'' type modelling, a disadvantage the machine learning methods are often criticized for. It explores what the data-driven method of support vector machine has to offer to improve the interpretability of the forecast, uncovers the properties of the developed system with respect to highlighting which are the important features that led to the particular prediction (both in time and space), and presents the analysis of sensitivity of the prediction with respect to the varying input parameters. The purpose of the

  6. Spatio-temporal Characteristics of Actual Evapotranspiration Trends in sub-Saharan Africa

    Science.gov (United States)

    Marshall, M. T.; Funk, C. C.; Michaelsen, J.

    2010-12-01

    Actual evapotranspiration (AET) is an important moisture flux linking the Earth’s surface to the atmospheric hydrologic cycle. Global warming is expected to intensify this cycle, leading to moisture deficits over the sub-tropics, which will influence climate at higher latitudes. The spatio-temporal characterization of tropical AET is critical to understanding regional and global climate. To date, many studies on the temporal characteristics of AET across sub-Saharan Africa have employed vegetation-based indices derived from satellite imagery. Although these studies implicitly reflect trends in AET, they quantify the magnitude of change. In this study, we used the latest developments in remote sensing and land-surface modeling to characterize the magnitude and timing of AET in sub-Saharan Africa. We considered several models were evaluated from 1981-2000 using monthly discharge and precipitation from ten sub-basins representative of hydrology in sub-Saharan Africa. Discharge data was provided by the Global Runoff Data Centre, while precipitation data was comprised of ECMWF, NCAR, NOAA/GDAS, and CMAP reanalysis fields synthesized in the Global Land Data Assimilation System (GLDAS). The AET models included the Community Land Model, Variable Infiltration Capacity (VIC) model, Noah, and two hybrids that we developed driven by a dynamic vegetation component defined in Fisher et al. 2008. The dynamic canopy components in our hybrid models were driven by the LTDR AVHRR daily corrected reflectance data over the evaluation period. The evaluation revealed that VIC was superior to the other models in capturing the magnitude and variability of runoff in the sub-basins. A trend analysis was then performed on VIC AET from 1979-2009 using standard parametric and non-parametric techniques. Linear and median trend analysis was performed on seasonal and annual AET totals to measure the magnitude of change. The analysis revealed several alarming patterns, including large and

  7. The Ecuadorian Artisanal Fishery for Large Pelagics: Species Composition and Spatio-Temporal Dynamics

    Science.gov (United States)

    Martínez-Ortiz, Jimmy; Aires-da-Silva, Alexandre M.; Lennert-Cody, Cleridy E.; Maunder, Mark N.

    2015-01-01

    The artisanal fisheries of Ecuador operate within one of the most dynamic and productive marine ecosystems of the world. This study investigates the catch composition of the Ecuadorian artisanal fishery for large pelagic fishes, including aspects of its spatio-temporal dynamics. The analyses of this study are based on the most extensive dataset available to date for this fishery: a total of 106,963 trip-landing inspection records collected at its five principal ports during 2008 ‒ 2012. Ecuadorian artisanal fisheries remove a substantial amount of biomass from the upper trophic-level predatory fish community of the eastern tropical Pacific Ocean. It is estimated that at least 135 thousand metric tons (mt) (about 15.5 million fish) were landed in the five principal ports during the study period. The great novelty of Ecuadorian artisanal fisheries is the “oceanic-artisanal” fleet component, which consists of mother-ship (nodriza) boats with their towed fiber-glass skiffs (fibras) operating with pelagic longlines. This fleet has fully expanded into oceanic waters as far offshore as 100°W, west of the Galapagos Archipelago. It is estimated that nodriza operations produce as much as 80% of the total catches of the artisanal fishery. The remainder is produced by independent fibras operating in inshore waters with pelagic longlines and/or surface gillnets. A multivariate regression tree analysis was used to investigate spatio-environmental effects on the nodriza fleet (n = 6,821 trips). The catch species composition of the nodriza fleet is strongly influenced by the northwesterly circulation of the Humboldt Current along the coast of Peru and its associated cold waters masses. The target species and longline gear-type used by nodrizas change seasonally with the incursion of cool waters (< 25°C) from the south and offshore. During this season, dolphinfish (Coryphaena hippurus) dominates the catches. However, in warmer waters, the fishery changes to tuna

  8. Complex, dynamic combination of physical, chemical and nutritional variables controls spatio-temporal variation of sandy beach community structure.

    Directory of Open Access Journals (Sweden)

    Kelly Ortega Cisneros

    Full Text Available Sandy beach ecological theory states that physical features of the beach control macrobenthic community structure on all but the most dissipative beaches. However, few studies have simultaneously evaluated the relative importance of physical, chemical and biological factors as potential explanatory variables for meso-scale spatio-temporal patterns of intertidal community structure in these systems. Here, we investigate macroinfaunal community structure of a micro-tidal sandy beach that is located on an oligotrophic subtropical coast and is influenced by seasonal estuarine input. We repeatedly sampled biological and environmental variables at a series of beach transects arranged at increasing distances from the estuary mouth. Sampling took place over a period of five months, corresponding with the transition between the dry and wet season. This allowed assessment of biological-physical relationships across chemical and nutritional gradients associated with a range of estuarine inputs. Physical, chemical, and biological response variables, as well as measures of community structure, showed significant spatio-temporal patterns. In general, bivariate relationships between biological and environmental variables were rare and weak. However, multivariate correlation approaches identified a variety of environmental variables (i.e., sampling session, the C∶N ratio of particulate organic matter, dissolved inorganic nutrient concentrations, various size fractions of photopigment concentrations, salinity and, to a lesser extent, beach width and sediment kurtosis that either alone or combined provided significant explanatory power for spatio-temporal patterns of macroinfaunal community structure. Overall, these results showed that the macrobenthic community on Mtunzini Beach was not structured primarily by physical factors, but instead by a complex and dynamic blend of nutritional, chemical and physical drivers. This emphasises the need to recognise ocean

  9. Automatic calibration of a parsimonious ecohydrological model in a sparse basin using the spatio-temporal variation of the NDVI

    Science.gov (United States)

    Ruiz-Pérez, Guiomar; Manfreda, Salvatore; Caylor, Kelly; Francés, Félix

    2016-04-01

    Drylands are extensive, covering 30% of the Earth's land surface and 50% of Africa. In these water-controlled areas, vegetation plays a key role in the water cycle. Ecohydrological models provide a tool to investigate the relationships between vegetation and water resources. However, studies in Africa often face the problem that many ecohydrological models have quite extensive parametrical requirements, while available data are scarce. Therefore, there is a need for searching new sources of information such as satellite data. The advantages of the use of satellite data in dry regions has been deeply demonstrated and studied. But, the use of this kind of data forces to introduce the concept of spatio-temporal information. In this context, we have to deal with the fact that there is a lack in terms of statistics and methodologies to incorporate the spatio-temporal data during the calibration and validation processes. This research wants to be a contribution in that sense. The used ecohydrological model was calibrated in the Upper Ewaso river basin in Kenya only using NDVI (Normalized Difference Vegetation Index) data from MODIS. An automatic calibration methodology based on Singular Value Decomposition techniques was proposed in order to calibrate the model taking into account the temporal variation and, also, the spatial pattern of the observed NDVI and the simulated LAI. The obtained results have demonstrated: (1) the satellite data is an extraordinary useful tool of information and it can be used to implement ecohydrological models in dry regions; (2) the proposed model calibrated only using satellite data is able to reproduce the vegetation dynamics (in time and in space) and, also, the observed discharge at the outlet point; and (3) the proposed automatic calibration methodology works satisfactorily and it includes spatio-temporal data, in other words, it takes into account the temporal variation and the spatial pattern of the analyzed data.

  10. SOLAP technology: Merging business intelligence with geospatial technology for interactive spatio-temporal exploration and analysis of data

    Science.gov (United States)

    Rivest, Sonia; Bédard, Yvan; Proulx, Marie-Josée; Nadeau, Martin; Hubert, Frederic; Pastor, Julien

    To support their analytical processes, today's organizations deploy data warehouses and client tools such as OLAP (On-Line Analytical Processing) to access, visualize, and analyze their integrated, aggregated and summarized data. Since a large part of these data have a spatial component, better client tools are required to take full advantage of the geometry of the spatial phenomena or objects being analyzed. With this regard, Spatial OLAP (SOLAP) technology offers promising possibilities. A SOLAP tool can be defined as "a type of software that allows rapid and easy navigation within spatial databases and that offers many levels of information granularity, many themes, many epochs and many display modes synchronized or not: maps, tables and diagrams" [Bédard, Y., Proulx, M.J., Rivest, S., 2005. Enrichissement du OLAP pour l'analyse géographique: exemples de réalisation et différentes possibilités technologiques. In: Bentayeb, F., Boussaid, O., Darmont, J., Rabaseda, S. (Eds.), Entrepôts de Données et Analyse en ligne, RNTI B_1. Paris: Cépaduès, pp. 1-20]. SOLAP tools offer a new user interface and are meant to be client applications sitting on top of multi-scale spatial data warehouses or datacubes. As they are based on the multidimensional paradigm, they facilitate the interactive spatio-temporal exploration of data. The purpose of this paper is to discuss how SOLAP concepts support spatio-temporal exploration of data and then to present the geovisualization, interactivity, and animation features of the SOLAP software developed by our research group. This paper first reviews the general concepts behind OLAP and SOLAP systems. This is followed by a discussion of how these SOLAP concepts support spatio-temporal exploration of data. In the subsequent section, SOLAP software is introduced along with features that enable geovisualization, interactivity and animation.

  11. Removal of Gross Air Embolization from Cardiopulmonary Bypass Circuits with Integrated Arterial Line Filters: A Comparison of Circuit Designs.

    Science.gov (United States)

    Reagor, James A; Holt, David W

    2016-03-01

    Advances in technology, the desire to minimize blood product transfusions, and concerns relating to inflammatory mediators have lead many practitioners and manufacturers to minimize cardiopulmonary bypass (CBP) circuit designs. The oxygenator and arterial line filter (ALF) have been integrated into one device as a method of attaining a reduction in prime volume and surface area. The instructions for use of a currently available oxygenator with integrated ALF recommends incorporating a recirculation line distal to the oxygenator. However, according to an unscientific survey, 70% of respondents utilize CPB circuits incorporating integrated ALFs without a path of recirculation distal to the oxygenator outlet. Considering this circuit design, the ability to quickly remove a gross air bolus in the blood path distal to the oxygenator may be compromised. This in vitro study was designed to determine if the time required to remove a gross air bolus from a CPB circuit without a path of recirculation distal to the oxygenator will be significantly longer than that of a circuit with a path of recirculation distal to the oxygenator. A significant difference was found in the mean time required to remove a gross air bolus between the circuit designs (p = .0003). Additionally, There was found to be a statistically significant difference in the mean time required to remove a gross air bolus between Trial 1 and Trials 4 (p = .015) and 5 (p =.014) irrespective of the circuit design. Under the parameters of this study, a recirculation line distal to an oxygenator with an integrated ALF significantly decreases the time it takes to remove an air bolus from the CPB circuit and may be safer for clinical use than the same circuit without a recirculation line.

  12. On Spatio-temporal Events Clustering Methods%时空事件聚类分析方法研究

    Institute of Scientific and Technical Information of China (English)

    唐建波; 邓敏; 刘启亮

    2013-01-01

    Clustering analysis of spatio-temporal event is a forefront research in the spatio-temporal data mining domain.It has important applications in disease early warning and controlling, climate change, earthquake prediction and the analysis of crimes.Firstly, the research actuality and new progresses in spatio-temporal event clustering algorithm in recent years are investigated and summarized.Secondly, the analysis and comparison of four representative spatio-temporal event clustering methods (i.e.Space-time permutation scan statistic, ST-DBSCAN, WNN, STSNN) have been made from the views of clustering quality and user operation.Moreover, clustering conditions of the same method for different types of data sets as well as different methods for the same datasets are analyzed.Finally, the advantages, disadvantages and applicability of these four clustering methods are summarized after several experiments and comparative analyses, and a number of issues for further research are highlighted.%时空事件聚类分析是当前聚类分析研究领域最前沿的一项主要内容,在疾病预警与控制、气候变化、地震预测及犯罪行为分析等领域具有重要的应用价值.本文一方面针对时空事件聚类分析的研究现状与最新进展进行归纳总结;另一方面选取四种代表性的时空事件聚类分析方法(时空重排扫描统计,ST-DBSCAN,WKN,STSNN)从聚类质量与用户操作两个方面进行试验分析,对同一方法针对不同类型数据集,以及不同方法针对同一数据集的聚类效果进行了对比分析.最后,在实验分析的基础上对现有时空事件聚类分析的优缺点及适用性进行了归纳总结,并指出了需要进一步研究的若干问题.

  13. Exact results for spatio-temporal correlations in a self-organized critical model of punctuated equilibrium

    CERN Document Server

    Böttcher, S; Boettcher, Stefan; Paczuski, Maya

    1995-01-01

    We propose a model of punctuated equilibrium behavior in biological evolution, where each species has many independent degrees of freedom. This model exhibits self-organized criticality and contains the Bak-Sneppen evolution model as a special case. The sum over histories for the irreversible dynamics is systematically determined by a cascade mechanism. This mechanism provides exact analytical results for the spatio-temporal distribution functions in a particular limit of the model. We use these results to determine individual critical exponents and verify the scaling relations for this class of models.

  14. Examining the Impacts of Land Use on Air Quality from a Spatio-Temporal Perspective in Wuhan, China

    OpenAIRE

    Gang Xu; Limin Jiao; Suli Zhao; Man Yuan; Xiaoming Li; Yuyao Han; Boen Zhang; Ting Dong

    2016-01-01

    Air pollution is one of the key environmental problems associated with urbanization and land use. Taking Wuhan city, Central China, as a case example, we explore the quantitative relationship between land use (built-up land, water bodies, and vegetation) and air quality (SO2, NO2, and PM10) based on nine ground-level monitoring sites from a long-term spatio-temporal perspective in 2007–2014. Five buffers with radiuses from 0.5 to 4 km are created at each site in geographical information syste...

  15. The Road to Thermalization Emergence of Global and Local Spatio-Temporal Order in a Nonlinear Field Model

    CERN Document Server

    Gleiser, Marcello; Gleiser, Marcelo; Howell, Rafael C.

    2002-01-01

    We investigate the approach to equilibrium of a scalar field in (2+1)-dimensions. The field is set in a double-well potential in contact (open) or not (closed) with a heat bath. For closed systems, we observe the synchronized emergence of coherent spatio-temporal configurations, identified with oscillons. This initial global ordering degenerates into localized order until all oscillons disappear. We show that the synchronization is driven by oscillations of the field's zero mode and that local ordering is only possible outside equipartition. None of this ordering occurs for open systems.

  16. 2-D DOAs estimation in impulsive noise environments using joint diagonalization fractional lower-order spatio-temporal matrices

    Institute of Scientific and Technical Information of China (English)

    XIA TieQi; WAN Qun; WANG XueGang; ZHENG Yi

    2008-01-01

    A novel joint diagonalization fractional lower-order spatio-temporal (ST) moments DOA matrix method is proposed to estimate the 2-D DOAs of uncorrelated narrowband signals in the presence of impulsive noise.The new method retains the advantage of the original ST-DOA matrix method which can estimate 2-D DOAs with neither peak searching nor pair matching.Moreover,it can handle sources with common 1-D angles.Simulation results show that the proposed method yields to better performance to restrain the strong impulsive noise than ST-DOA matrix method,especially for low signal-to-noise ratio case.

  17. TU-F-BRF-08: Intensity Modulation Expanded to Spatio-Temporal Space; IMRT Combined with Optimal Fractionation Schedule

    International Nuclear Information System (INIS)

    Purpose: Past efforts to improve the therapeutic ratio have focused on a spatial approach where highly conformal radiation dose is given to tumors while minimizing dose to normal tissues, e.g., IMRT, VMAT, and IGRT. However, the fractionation schedule, i.e., a temporal approach to radiotherapy, has been largely overlooked so far in maximizing the therapeutic ratio. We establish a rigorous mathematical spatio-temporal approach to systematically investigate the feasibility and potential benefits of simultaneously optimizing radiation dose distribution in space and time. Methods: Stochastic control formalism is constructed to maximize the average tumor BED by choosing an optimal radiation dose distribution for an optimal number of fractions subject to normal tissue BED constraints. Three separate simulations are run on two groups of phantom cases; 5 cases with prostate cancer and 5 cases with head-and-neck cancer. (1) Conventional IMRT with 70Gy/35fx for head-and-neck, and 81Gy/45fx for prostate, (2) IMRT is done independently from the fractionation schedule optimization (S-model), (3) integrated spatio-temporal approach (I-model) where radiation intensities are simultaneously optimized for the first time ever in space and time. Final tumor BEDs from the three trials are compared in prostate and head-and-neck cases. Results: Numerical simulations show that final tumor BED from I-model is 20–90% larger than conventional IMRT, and 20-50% larger than S-model for head-and-neck cancer with α/β=10 and Tdouble=2–50 days. Final tumor BED from I-model is also 90–140% larger than conventional IMRT, and 20–30% larger than S-model for prostate cancer with α/β=2 and Tdouble=5–80 days. Conclusion: Our spatio-temporal optimization of radiotherapy allows an expansion of search space for the optimal treatment plans to include the temporal distribution of radiation dose in addition to the spatial distribution. Such spatio-temporal approach shows great potential to improve

  18. Mechanistic spatio-temporal point process models for marked point processes, with a view to forest stand data

    DEFF Research Database (Denmark)

    Møller, Jesper; Ghorbani, Mohammad; Rubak, Ege Holger

    We show how a spatial point process, where to each point there is associated a random quantitative mark, can be identified with a spatio-temporal point process specified by a conditional intensity function. For instance, the points can be tree locations, the marks can express the size of trees......, and the conditional intensity function can describe the distribution of a tree (i.e., its location and size) conditionally on the larger trees. This enable us to construct parametric statistical models which are easily interpretable and where likelihood-based inference is tractable. In particular, we consider maximum...

  19. TU-F-BRF-08: Intensity Modulation Expanded to Spatio-Temporal Space; IMRT Combined with Optimal Fractionation Schedule

    Energy Technology Data Exchange (ETDEWEB)

    Kim, M; Saberian, F; Ghate, A [University of Washington, Seattle, WA (United States)

    2014-06-15

    Purpose: Past efforts to improve the therapeutic ratio have focused on a spatial approach where highly conformal radiation dose is given to tumors while minimizing dose to normal tissues, e.g., IMRT, VMAT, and IGRT. However, the fractionation schedule, i.e., a temporal approach to radiotherapy, has been largely overlooked so far in maximizing the therapeutic ratio. We establish a rigorous mathematical spatio-temporal approach to systematically investigate the feasibility and potential benefits of simultaneously optimizing radiation dose distribution in space and time. Methods: Stochastic control formalism is constructed to maximize the average tumor BED by choosing an optimal radiation dose distribution for an optimal number of fractions subject to normal tissue BED constraints. Three separate simulations are run on two groups of phantom cases; 5 cases with prostate cancer and 5 cases with head-and-neck cancer. (1) Conventional IMRT with 70Gy/35fx for head-and-neck, and 81Gy/45fx for prostate, (2) IMRT is done independently from the fractionation schedule optimization (S-model), (3) integrated spatio-temporal approach (I-model) where radiation intensities are simultaneously optimized for the first time ever in space and time. Final tumor BEDs from the three trials are compared in prostate and head-and-neck cases. Results: Numerical simulations show that final tumor BED from I-model is 20–90% larger than conventional IMRT, and 20-50% larger than S-model for head-and-neck cancer with α/β=10 and Tdouble=2–50 days. Final tumor BED from I-model is also 90–140% larger than conventional IMRT, and 20–30% larger than S-model for prostate cancer with α/β=2 and Tdouble=5–80 days. Conclusion: Our spatio-temporal optimization of radiotherapy allows an expansion of search space for the optimal treatment plans to include the temporal distribution of radiation dose in addition to the spatial distribution. Such spatio-temporal approach shows great potential to improve

  20. Measuring user similarity using electric circuit analysis: application to collaborative filtering.

    Science.gov (United States)

    Yang, Joonhyuk; Kim, Jinwook; Kim, Wonjoon; Kim, Young Hwan

    2012-01-01

    We propose a new technique of measuring user similarity in collaborative filtering using electric circuit analysis. Electric circuit analysis is used to measure the potential differences between nodes on an electric circuit. In this paper, by applying this method to transaction networks comprising users and items, i.e., user-item matrix, and by using the full information about the relationship structure of users in the perspective of item adoption, we overcome the limitations of one-to-one similarity calculation approach, such as the Pearson correlation, Tanimoto coefficient, and Hamming distance, in collaborative filtering. We found that electric circuit analysis can be successfully incorporated into recommender systems and has the potential to significantly enhance predictability, especially when combined with user-based collaborative filtering. We also propose four types of hybrid algorithms that combine the Pearson correlation method and electric circuit analysis. One of the algorithms exceeds the performance of the traditional collaborative filtering by 37.5% at most. This work opens new opportunities for interdisciplinary research between physics and computer science and the development of new recommendation systems.

  1. Measuring user similarity using electric circuit analysis: application to collaborative filtering.

    Directory of Open Access Journals (Sweden)

    Joonhyuk Yang

    Full Text Available We propose a new technique of measuring user similarity in collaborative filtering using electric circuit analysis. Electric circuit analysis is used to measure the potential differences between nodes on an electric circuit. In this paper, by applying this method to transaction networks comprising users and items, i.e., user-item matrix, and by using the full information about the relationship structure of users in the perspective of item adoption, we overcome the limitations of one-to-one similarity calculation approach, such as the Pearson correlation, Tanimoto coefficient, and Hamming distance, in collaborative filtering. We found that electric circuit analysis can be successfully incorporated into recommender systems and has the potential to significantly enhance predictability, especially when combined with user-based collaborative filtering. We also propose four types of hybrid algorithms that combine the Pearson correlation method and electric circuit analysis. One of the algorithms exceeds the performance of the traditional collaborative filtering by 37.5% at most. This work opens new opportunities for interdisciplinary research between physics and computer science and the development of new recommendation systems.

  2. New Fast Fall Detection Method Based on Spatio-Temporal Context Tracking of Head by Using Depth Images

    Science.gov (United States)

    Yang, Lei; Ren, Yanyun; Hu, Huosheng; Tian, Bo

    2015-01-01

    In order to deal with the problem of projection occurring in fall detection with two-dimensional (2D) grey or color images, this paper proposed a robust fall detection method based on spatio-temporal context tracking over three-dimensional (3D) depth images that are captured by the Kinect sensor. In the pre-processing procedure, the parameters of the Single-Gauss-Model (SGM) are estimated and the coefficients of the floor plane equation are extracted from the background images. Once human subject appears in the scene, the silhouette is extracted by SGM and the foreground coefficient of ellipses is used to determine the head position. The dense spatio-temporal context (STC) algorithm is then applied to track the head position and the distance from the head to floor plane is calculated in every following frame of the depth image. When the distance is lower than an adaptive threshold, the centroid height of the human will be used as the second judgment criteria to decide whether a fall incident happened. Lastly, four groups of experiments with different falling directions are performed. Experimental results show that the proposed method can detect fall incidents that occurred in different orientations, and they only need a low computation complexity. PMID:26378540

  3. A spatio-temporal Gaussian-Conical wavelet with high aperture selectivity for motion and speed analysis

    CERN Document Server

    Brault, Patrice

    2012-01-01

    The construction of a spatio-temporal wavelet and its tuning to speed was first realized in the 90s on the Morlet wavelet by M. Duval-Destin \\cite{Duval-Destin91a,Duval-Destin92}. This enabled to demonstrate the capacities of the speed-tuned Morlet for psychovisual analysis. This construction was also used very efficiently in a powerful aerial target tracking algorithm by Mujica et al.\\cite{Mujica99,Mujica2000}. In the last decade, this tool was proposed as an elegant and efficient alternative framework to the Optical Flow (OF), the Block Matching (BM) or the phase difference, for the study of motion estimation in image sequences. Nevertheless, the aperture selectivity of the 2D+T Morlet wavelet presents some difficulties. Here we propose to replace the 2D Morlet wavelet by a Gaussian-Conical (GC) wavelet for the spatial part of the spatio-temporal wavelet, since the GC wavelet has a better aperture selectivity and allows a very simple adjustment of the aperture. Therefore we build a new, highly directional, ...

  4. Estimation of 3D cardiac deformation using spatio-temporal elastic registration of non-scanconverted ultrasound data

    Science.gov (United States)

    Elen, An; Loeckx, Dirk; Choi, Hon Fai; Gao, Hang; Claus, Piet; Maes, Frederik; Suetens, Paul; D'hooge, Jan

    2008-03-01

    Current ultrasound methods for measuring myocardial strain are often limited to measurements in one or two dimensions. Spatio-temporal elastic registration of 3D cardiac ultrasound data can however be used to estimate the 3D motion and full 3D strain tensor. In this work, the spatio-temporal elastic registration method was validated for both non-scanconverted and scanconverted images. This was done using simulated 3D pyramidal ultrasound data sets based on a thick-walled deforming ellipsoid and an adapted convolution model. A B-spline based frame-to-frame elastic registration method was applied to both the scanconverted and non-scanconverded data sets and the accuracy of the resulting deformation fields was quantified. The mean accuracy of the estimated displacement was very similar for the scanconverted and non-scanconverted data sets and thus, it was shown that 3D elastic registration to estimate the cardiac deformation from ultrasound images can be performed on non-scanconverted images, but that avoiding of the scanconversion step does not significantly improve the results of the displacement estimation.

  5. The Homeobox Genes of Caenorhabditis elegans and Insights into Their Spatio-Temporal Expression Dynamics during Embryogenesis.

    Directory of Open Access Journals (Sweden)

    Jürgen Hench

    Full Text Available Homeobox genes play crucial roles for the development of multicellular eukaryotes. We have generated a revised list of all homeobox genes for Caenorhabditis elegans and provide a nomenclature for the previously unnamed ones. We show that, out of 103 homeobox genes, 70 are co-orthologous to human homeobox genes. 14 are highly divergent, lacking an obvious ortholog even in other Caenorhabditis species. One of these homeobox genes encodes 12 homeodomains, while three other highly divergent homeobox genes encode a novel type of double homeodomain, termed HOCHOB. To understand how transcription factors regulate cell fate during development, precise spatio-temporal expression data need to be obtained. Using a new imaging framework that we developed, Endrov, we have generated spatio-temporal expression profiles during embryogenesis of over 60 homeobox genes, as well as a number of other developmental control genes using GFP reporters. We used dynamic feedback during recording to automatically adjust the camera exposure time in order to increase the dynamic range beyond the limitations of the camera. We have applied the new framework to examine homeobox gene expression patterns and provide an analysis of these patterns. The methods we developed to analyze and quantify expression data are not only suitable for C. elegans, but can be applied to other model systems or even to tissue culture systems.

  6. Hierarchical Bayesian Spatio-Temporal Analysis of Climatic and Socio-Economic Determinants of Rocky Mountain Spotted Fever.

    Science.gov (United States)

    Raghavan, Ram K; Goodin, Douglas G; Neises, Daniel; Anderson, Gary A; Ganta, Roman R

    2016-01-01

    This study aims to examine the spatio-temporal dynamics of Rocky Mountain spotted fever (RMSF) prevalence in four contiguous states of Midwestern United States, and to determine the impact of environmental and socio-economic factors associated with this disease. Bayesian hierarchical models were used to quantify space and time only trends and spatio-temporal interaction effect in the case reports submitted to the state health departments in the region. Various socio-economic, environmental and climatic covariates screened a priori in a bivariate procedure were added to a main-effects Bayesian model in progressive steps to evaluate important drivers of RMSF space-time patterns in the region. Our results show a steady increase in RMSF incidence over the study period to newer geographic areas, and the posterior probabilities of county-specific trends indicate clustering of high risk counties in the central and southern parts of the study region. At the spatial scale of a county, the prevalence levels of RMSF is influenced by poverty status, average relative humidity, and average land surface temperature (>35°C) in the region, and the relevance of these factors in the context of climate-change impacts on tick-borne diseases are discussed. PMID:26942604

  7. Hierarchical Bayesian Spatio-Temporal Analysis of Climatic and Socio-Economic Determinants of Rocky Mountain Spotted Fever.

    Directory of Open Access Journals (Sweden)

    Ram K Raghavan

    Full Text Available This study aims to examine the spatio-temporal dynamics of Rocky Mountain spotted fever (RMSF prevalence in four contiguous states of Midwestern United States, and to determine the impact of environmental and socio-economic factors associated with this disease. Bayesian hierarchical models were used to quantify space and time only trends and spatio-temporal interaction effect in the case reports submitted to the state health departments in the region. Various socio-economic, environmental and climatic covariates screened a priori in a bivariate procedure were added to a main-effects Bayesian model in progressive steps to evaluate important drivers of RMSF space-time patterns in the region. Our results show a steady increase in RMSF incidence over the study period to newer geographic areas, and the posterior probabilities of county-specific trends indicate clustering of high risk counties in the central and southern parts of the study region. At the spatial scale of a county, the prevalence levels of RMSF is influenced by poverty status, average relative humidity, and average land surface temperature (>35°C in the region, and the relevance of these factors in the context of climate-change impacts on tick-borne diseases are discussed.

  8. Downscaling future precipitation extremes to urban hydrology scales using a spatio-temporal Neyman-Scott weather generator

    Science.gov (United States)

    Jomo Danielsen Sørup, Hjalte; Bøssing Christensen, Ole; Arnbjerg-Nielsen, Karsten; Steen Mikkelsen, Peter

    2016-04-01

    Spatio-temporal precipitation is modelled for urban application at 1 h temporal resolution on a 2 km grid using a spatio-temporal Neyman-Scott rectangular pulses weather generator (WG). Precipitation time series used as input to the WG are obtained from a network of 60 tipping-bucket rain gauges irregularly placed in a 40 km × 60 km model domain. The WG simulates precipitation time series that are comparable to the observations with respect to extreme precipitation statistics. The WG is used for downscaling climate change signals from regional climate models (RCMs) with spatial resolutions of 25 and 8 km, respectively. Six different RCM simulation pairs are used to perturb the WG with climate change signals resulting in six very different perturbation schemes. All perturbed WGs result in more extreme precipitation at the sub-daily to multi-daily level and these extremes exhibit a much more realistic spatial pattern than what is observed in RCM precipitation output. The WG seems to correlate increased extreme intensities with an increased spatial extent of the extremes meaning that the climate-change-perturbed extremes have a larger spatial extent than those of the present climate. Overall, the WG produces robust results and is seen as a reliable procedure for downscaling RCM precipitation output for use in urban hydrology.

  9. Spatio-temporal variations in the diversity and abundance of commercially important Decapoda and Stomatopoda in subtropical Hong Kong waters

    Science.gov (United States)

    Lui, Karen K. Y.; Ng, Jasmine S. S.; Leung, Kenneth M. Y.

    2007-05-01

    In subtropical Hong Kong, western waters (WW) are strongly influenced by the freshwater input from the Pearl River estuary, especially during summer monsoon, whereas eastern waters (EW) are predominantly influenced by oceanic currents throughout the year. Such hydrographical differences may lead to spatio-temporal differences in biodiversity of benthic communities. This study investigated the diversity and abundance of commercially important decapods and stomatopods in EW (i.e. Tolo Harbour and Channel) and WW (i.e. Tuen Mun and Lantau Island) of Hong Kong using monthly trawl surveys (August 2003-May 2005). In total, 22 decapod and nine stomatopod species were recorded. The penaeid Metapenaeopsis sp. and stomatopod Oratosquillina interrupta were the most abundant and dominant crustaceans in EW and WW, respectively. Both univariate and multivariate analyses showed that WW supported significantly higher abundance, biomass and diversity of crustaceans than EW, although there were significant between-site and within-site variations in community structure. Higher abundance and biomass of crustaceans were recorded in summer than winter. Such spatio-temporal variations could be explained by differences in the hydrography, environmental conditions and anthropogenic impacts between the two areas. Temporal patterns in the abundance-biomass comparison curves and negative W-statistics suggest that the communities have been highly disturbed in both areas, probably due to anthropogenic activities such as bottom trawling and marine pollution.

  10. Spatio-Temporal Variability of Water Vapor in the Free Troposphere Investigated by Dial and Ftir Vertical Soundings

    Science.gov (United States)

    Vogelmann, H.; Sussmann, R.; Trickl, T.; Reichert, A.

    2016-06-01

    We report on the free tropospheric spatio-temporal variability of water vapor investigated by the analysis of a five-year period of water vapor vertical soundings above Mt. Zugspitze (2962 m a.s.l., Germany). Our results are obtained from a combination of measurements of vertically integrated water vapor (IWV), recorded with a solar Fourier Transform InfraRed (FTIR) spectrometer and of water vapor profiles recorded with the nearby differential absorption lidar (DIAL). The special geometrical arrangement of one zenith-viewing and one sun-pointing instrument and the temporal resolution of both optical instruments allow for an investigation of the spatio-temporal variability of IWV on a spatial scale of less than one kilometer and on a time scale of less than one hour. We investigated the short-term variability of both IWV and water vapor profiles from statistical analyses. The latter was also examined by case studies with a clear assignment to certain atmospheric processes as local convection or long-range transport. This study is described in great detail in our recent publication [1].

  11. Nutrients and toxin producing phytoplankton control algal blooms – a spatio-temporal study in a noisy environment

    Indian Academy of Sciences (India)

    Ram Rup Sarkar; Horst Malchow

    2005-12-01

    A phytoplankton-zooplankton prey-predator model has been investigated for temporal, spatial and spatio-temporal dissipative pattern formation in a deterministic and noisy environment, respectively. The overall carrying capacity for the phytoplankton population depends on the nutrient level. The role of nutrient concentrations and toxin producing phytoplankton for controlling the algal blooms has been discussed. The local analysis yields a number of stationary and/or oscillatory regimes and their combinations. Correspondingly interesting is the spatio-temporal behaviour, modelled by stochastic reaction-diffusion equations. The present study also reveals the fact that the rate of toxin production by toxin producing phytoplankton (TPP) plays an important role for controlling oscillations in the plankton system. We also observe that different mortality functions of zooplankton due to TPP have significant influence in controlling oscillations, coexistence, survival or extinction of the zooplankton population. External noise can enhance the survival and spread of zooplankton that would go extinct in the deterministic system due to a high rate of toxin production.

  12. Spatio-temporal variability of SST and Chlorophyll-a from MODIS data in the Persian Gulf.

    Science.gov (United States)

    Moradi, Masoud; Kabiri, Keivan

    2015-09-15

    Spatio-temporal variability of SST and Chl-a evaluated using MODIS products from 2002 to 2013 in the Persian Gulf. Wavelet Transform was utilized to analyze the spatio-temporal stability and abnormality of MODIS SST and Chl-a. The stationary level of SST decreases from west to the east during summer to early autumn, and increases from late autumn to spring. The stationary level of Chl-a is higher in the coastal areas, while its average ranged from 0.1 to 0.5mgm(-3). No meaningful major oscillating period observed in the abnormal variability of SST and Chl-a. The winter and summer peaks of SST and Chl-a were observed in the central parts and north-west regions. The timing of maximum SST was observed in August, which is not correlated with Chl-a maxima. The variability of SST and Chl-a in the whole Persian Gulf is seasonal, and related to river outflows, water circulation and climate regimes. PMID:26187398

  13. Spatio-temporal PLC activation in parallel with intracellular Ca2+ wave propagation in mechanically stimulated single MDCK cells.

    Science.gov (United States)

    Tsukamoto, Akira; Hayashida, Yasunori; Furukawa, Katsuko S; Ushida, Takashi

    2010-03-01

    Intracellular Ca2+ transients are evoked either by the opening of Ca2+ channels on the plasma membrane or by phospholipase C (PLC) activation resulting in IP3 production. Ca2+ wave propagation is known to occur in mechanically stimulated cells; however, it remains uncertain whether and how PLC activation is involved in intracellular Ca2+ wave propagation in mechanically stimulated cells. To answer these questions, it is indispensable to clarify the spatio-temporal relations between intracellular Ca2+ wave propagation and PLC activation. Thus, we visualized both cytosolic Ca2+ and PLC activation using a real-time dual-imaging system in individual Mardin-Darby Canine Kidney (MDCK) cells. This system allowed us to simultaneously observe intracellular Ca2+ wave propagation and PLC activation in a spatio-temporal manner in a single mechanically stimulated MDCK cell. The results showed that PLC was activated not only in the mechanically stimulated region but also in other subcellular regions in parallel with intracellular Ca2+ wave propagation. These results support a model in which PLC is involved in Ca2+ signaling amplification in mechanically stimulated cells.

  14. Identifying regional cardiac abnormalities from myocardial strains using nontracking-based strain estimation and spatio-temporal tensor analysis.

    Science.gov (United States)

    Qian, Zhen; Liu, Qingshan; Metaxas, Dimitris N; Axel, Leon

    2011-12-01

    Myocardial strain is a critical indicator of many cardiac diseases and dysfunctions. The goal of this paper is to extract and use the myocardial strain pattern from tagged magnetic resonance imaging (MRI) to identify and localize regional abnormal cardiac function in human subjects. In order to extract the myocardial strains from the tagged images, we developed a novel nontracking-based strain estimation method for tagged MRI. This method is based on the direct extraction of tag deformation, and therefore avoids some limitations of conventional displacement or tracking-based strain estimators. Based on the extracted spatio-temporal strain patterns, we have also developed a novel tensor-based classification framework that better conserves the spatio-temporal structure of the myocardial strain pattern than conventional vector-based classification algorithms. In addition, the tensor-based projection function keeps more of the information of the original feature space, so that abnormal tensors in the subspace can be back-projected to reveal the regional cardiac abnormality in a more physically meaningful way. We have tested our novel methods on 41 human image sequences, and achieved a classification rate of 87.80%. The regional abnormalities recovered from our algorithm agree well with the patient's pathology and clinical image interpretation, and provide a promising avenue for regional cardiac function analysis. PMID:21606022

  15. Spatio-temporal variability of the deposited radioactive materials in forest environments after the Fukushima Daiichi NPP accident

    Science.gov (United States)

    Kato, H.; Onda, Y.; Komatsu, Y.; Yoda, H.

    2012-12-01

    Soil, vegetation and other ecological compartments are expected to be highly contaminated by the deposited radionuclides after the Fukushima Daiichi nuclear power plant (NPP) accident triggered by a magnitude 9.1 earthquake and the resulting tsunami on Marchi 11, 2011. Study site have been established in Yamakiya district, Kawamata Town, Fukushima prefecture, located about 35 km from Fukushima power plant, and designated as the evacuated zone. The total deposition of radioactive materials at the study site ranged from 0.02to >10 M Bq/m2 for Cs-137. The mature cedar, young cedar, and broad-leaf stands were selected as experimental site for the monitoring of spatio-temporal variability of the deposited radionuclides after the accidental release of radioactive materials. In order to measure the vertical distribution of radioactivity in forest, a tower with the same height of tree have been established at each experimental site. The measurement of radioactivity by using a portable Ge gamma-ray detector (Detective-DX-100, Ortec) and radionuclide analysis of leaf samples at different height revealed that a large proportion of radionuclides which deposited on forest were trapped by canopies of the cedar forests. In contrast, in the broad-leaf forest highest radioactivity was found at the forest floor. Furthermore, spatio-temporal variability of radioactivity at the forest floor indicated that huge amount of caesium still remains on the canopy of coniferous forest, and subsequently transfers to forest floor in association with throughfall, stemflow, and litter fall.

  16. SuperFly: a comparative database for quantified spatio-temporal gene expression patterns in early dipteran embryos.

    Science.gov (United States)

    Cicin-Sain, Damjan; Pulido, Antonio Hermoso; Crombach, Anton; Wotton, Karl R; Jiménez-Guri, Eva; Taly, Jean-François; Roma, Guglielmo; Jaeger, Johannes

    2015-01-01

    We present SuperFly (http://superfly.crg.eu), a relational database for quantified spatio-temporal expression data of segmentation genes during early development in different species of dipteran insects (flies, midges and mosquitoes). SuperFly has a special focus on emerging non-drosophilid model systems. The database currently includes data of high spatio-temporal resolution for three species: the vinegar fly Drosophila melanogaster, the scuttle fly Megaselia abdita and the moth midge Clogmia albipunctata. At this point, SuperFly covers up to 9 genes and 16 time points per species, with a total of 1823 individual embryos. It provides an intuitive web interface, enabling the user to query and access original embryo images, quantified expression profiles, extracted positions of expression boundaries and integrated datasets, plus metadata and intermediate processing steps. SuperFly is a valuable new resource for the quantitative comparative study of gene expression patterns across dipteran species. Moreover, it provides an interesting test set for systems biologists interested in fitting mathematical gene network models to data. Both of these aspects are essential ingredients for progress toward a more quantitative and mechanistic understanding of developmental evolution.

  17. Design Of Wide Band Microstrip Bandstop Filter With Open-Circuited Stubs For Wireless Communication Applications

    Directory of Open Access Journals (Sweden)

    Sandeep Mukherjee

    2012-11-01

    Full Text Available Filters play an important role in most RF and Microwave applications. Currently, the electromagnetic spectrum is limited, and the applications are restricted to occupy just a portion of frequency range without affecting the equipment working out of band and also, without being affected by adjacent devices. Emerging applications such as wireless communications continue challenging RF/Microwave filters performance with even more stringent requirements, higher performance, smaller size, lighter weights, and low cost. Depending on the requirements and specifications, filters can mainly be designed with lumped or distributed elements. This paper describes the design of a newly proposed wide band micro strip band stop filter with open circuited stubs. This paper represents the design, simulation and fabrication of wideband bandstop filter using microstrip which is designed to have a center frequency of 2.5GHz. The filter is fabricated on a FR-4 substrate having dielectric constant

  18. Coupled-mode theory for electromagnetic pulse propagation in dispersive media undergoing a spatio-temporal perturbation - exact derivation, numerical validation and peculiar wave mixing

    CERN Document Server

    Sivan, Y; Halstuch, A

    2016-01-01

    We present an extension of the canonical coupled mode theory of electromagnetic waves to the case of pulses and spatio-temporal perturbations in complex media. Unlike previous attempts to derive such a model, our approach involves no approximation, and does not impose any restriction on the spatio-temporal profile. Moreover, the effect of modal dispersion on mode evolution and on the coupling to other modes is fully taken into account. Thus, our approach can yield any required accuracy by retaining as many terms in the expansion as needed. It also avoids various artifacts of previous derivations by introducing the correct form of the solution. We then provide what is, to the best of our knowledge, the first ever validation of the coupled mode equations with exact numerical simulations, and demonstrate the wide range of possibilities enabled by spatio-temporal perturbations of pulses, including pulse shortening or broadening or more complex shaping. Our formulation is valid across the electromagnetic spectrum,...

  19. 城镇地籍数据时空演变研究方法%The Research of Urban Cadastral Data in Spatio-temporal Dynamic Change

    Institute of Scientific and Technical Information of China (English)

    王荣辉; 聂飞

    2013-01-01

    By building a spatio-temporal model of urban cadastral data and making use of spatio-temporal analysis methods to analyze the interrelations among time,space and property of cadastral data,this thesis dug out the information about cadastral data and discovered the methods of spatio-temporal dynamic change of urban cadastral data.%建立城镇地籍数时空模型,运用时空分析方法,综合分析地籍数据的时间、空间和属性等各基本特征之间的相互关系,挖掘城镇地籍数据中的隐藏信息,探索研究城镇地籍数据空演变规律的方法.

  20. Decomposition of the complex system into nonlinear spatio-temporal modes: algorithm and application to climate data mining

    Science.gov (United States)

    Feigin, Alexander; Gavrilov, Andrey; Loskutov, Evgeny; Mukhin, Dmitry

    2015-04-01

    Proper decomposition of the complex system into well separated "modes" is a way to reveal and understand the mechanisms governing the system behaviour as well as discover essential feedbacks and nonlinearities. The decomposition is also natural procedure that provides to construct adequate and concurrently simplest models of both corresponding sub-systems, and of the system in whole. In recent works two new methods of decomposition of the Earth's climate system into well separated modes were discussed. The first method [1-3] is based on the MSSA (Multichannel Singular Spectral Analysis) [4] for linear expanding vector (space-distributed) time series and makes allowance delayed correlations of the processes recorded in spatially separated points. The second one [5-7] allows to construct nonlinear dynamic modes, but neglects delay of correlations. It was demonstrated [1-3] that first method provides effective separation of different time scales, but prevent from correct reduction of data dimension: slope of variance spectrum of spatio-temporal empirical orthogonal functions that are "structural material" for linear spatio-temporal modes, is too flat. The second method overcomes this problem: variance spectrum of nonlinear modes falls essentially sharply [5-7]. However neglecting time-lag correlations brings error of mode selection that is uncontrolled and increases with growth of mode time scale. In the report we combine these two methods in such a way that the developed algorithm allows constructing nonlinear spatio-temporal modes. The algorithm is applied for decomposition of (i) multi hundreds years globally distributed data generated by the INM RAS Coupled Climate Model [8], and (ii) 156 years time series of SST anomalies distributed over the globe [9]. We compare efficiency of different methods of decomposition and discuss the abilities of nonlinear spatio-temporal modes for construction of adequate and concurrently simplest ("optimal") models of climate systems

  1. Spatio-temporal dynamics of surface water quality in a Portuguese peri-urban catchment

    Science.gov (United States)

    Ferreira, Carla; Walsh, Rory; Coelho, Celeste; Ferreira, António

    2016-04-01

    highest concentrations after the summer. Low discharges led to high pollutant concentrations at baseflow of N-NH4 in ESAC and Porto Bordalo (up to 1.63 mgL-1 and 1.04 mgL-1, respectively). The first storm events after the summer led to flushing of accumulated pollutants to produce serious concentrations of N-Nk in Porto Bordalo (2.05 mgL-1) and Zn at ESAC and Porto Bordalo (up to 0.55 mgL-1 and 0.59 mgL-1, respectively), all recorded at peak flows. In wettest periods, greater flow connectivity over the hillslopes led to pollutant concentrations of N-Nk at ESAC, Espírito Santo and Quinta (up to 2.07 mgL-1, 2.54 mgL-1 and 2.83 mgL-1, respectively). Also high levels of Cu and Zn occurred at ESAC (1.74 mgL-1and 0.77 mgL-1) during the falling limb. Baseflow chemistry was influenced by bedrock, with highest median concentrations of Ca and Mg, lowest values of Na, and higher pH recorded in limestone (p<0.05). Information about the spatio-temporal dynamics of pollutants, linked to urban patterns and storm drainage system, should help enable urban planners to minimize adverse impacts of urbanization on water quality.

  2. The spatio-temporal structure of electrostatic turbulence in the WEGA stellarator

    Energy Technology Data Exchange (ETDEWEB)

    Marsen, Stefan

    2008-03-15

    The main object of this work is to provide a detailed characterisation of electrostatic turbulence in WEGA and to identify the underlying instability mechanism driving turbulence. The spatio-temporal structure of turbulence is studied using multiple Langmuir probes providing a sufficiently high spatial and temporal resolution. Turbulence in WEGA is dominated by drift wave dynamics. The phase shift between density and potential fluctuations is close to zero, fluctuations are mainly driven by the density gradient, and the phase velocity of turbulent structures points in the direction of the electron diamagnetic drift. The structure of turbulence is studied mainly in the plasma edge region inside the last closed flux surface. WEGA can be operated in two regimes differing in the magnetic field strength by almost one order of magnitude (57 mT and 500 mT, respectively). At 57 mT large structures with a poloidal extent comparable to the machine dimensions are observed, whereas at 500 mT turbulent structures are much smaller. The poloidal structure size scales nearly linearly with the inverse magnetic field strength. This scaling may be argued to be related to the drift wave dispersion scale, {rho}{sub s}={radical}(m{sub i}k{sub B}T{sub e})/(qB). However, the structure size remains unchanged when the ion mass is changed by using different discharge gases. Inside the last closed flux surface the poloidal E x B drift in WEGA is negligible. The three-dimensional structure is studied in detail using probes which are toroidally separated but aligned along connecting magnetic field lines. A small but finite parallel wavenumber is found. The ratio between the average parallel and perpendicular wavenumber is in the order of anti {kappa} {sub parallel} / anti {kappa}{sub {theta}} {approx} 10{sup -2}. The parallel phase velocity of turbulent structures is in-between the ion sound velocity and the Alfven velocity. In the parallel dynamics a fundamental difference between the two

  3. Feasibility of Tunable Amplifier and Bandpass Filter for Mobile Handsets Using Active Inductor Circuits

    OpenAIRE

    Majeed, B.; N. T. Ali; J. Rodriguez Tellez

    2002-01-01

    In this paper active inductor circuits are employed to assess their suitability for providing a tuning function in GaAs MMIC circuits. The specifications for a mobile handset amplifier and a bandpass filter operating from a 3 V supply rail are used as test vehicles. The design and simulation of the circuits employs a low-cost commercially available low pinch-off GaAs MESFET process. The suitability of active inductors for tuning in such applications considers issues such as frequency tuning r...

  4. Voltage-Mode All-Pass Filters Including Minimum Component Count Circuits

    Directory of Open Access Journals (Sweden)

    Sudhanshu Maheshwari

    2007-01-01

    Full Text Available This paper presents two new first-order voltage-mode all-pass filters using a single-current differencing buffered amplifier and four passive components. Each circuit is compatible to a current-controlled current differencing buffered amplifier with only two passive elements, thus resulting in two more circuits, which employ a capacitor, a resistor, and an active element, thus using a minimum of active and passive component counts. The proposed circuits possess low output impedance, and hence can be easily cascaded for voltage-mode systems. PSPICE simulation results are given to confirm the theory.

  5. Integration of various data sources for transient groundwater modeling with spatio-temporally variable fluxes—Sardon study case, Spain

    Science.gov (United States)

    Lubczynski, Maciek W.; Gurwin, Jacek

    2005-05-01

    Spatio-temporal variability of recharge ( R) and groundwater evapotranspiration ( ETg) fluxes in a granite Sardon catchment in Spain (˜80 km 2) have been assessed based on integration of various data sources and methods within the numerical groundwater MODFLOW model. The data sources and methods included: remote sensing solution of surface energy balance using satellite data, sap flow measurements, chloride mass balance, automated monitoring of climate, depth to groundwater table and river discharges, 1D reservoir modeling, GIS modeling, field cartography and aerial photo interpretation, slug and pumping tests, resistivity, electromagnetic and magnetic resonance soundings. The presented study case provides not only detailed evaluation of the complexity of spatio-temporal variable fluxes, but also a complete and generic methodology of modern data acquisition and data integration in transient groundwater modeling for spatio-temporal groundwater balancing. The calibrated numerical model showed spatially variable patterns of R and ETg fluxes despite a uniform rainfall pattern. The seasonal variability of fluxes indicated: (1) R in the range of 0.3-0.5 mm/d within ˜8 months of the wet season with exceptional peaks as high as 0.9 mm/d in January and February and no recharge in July and August; (2) a year round stable lateral groundwater outflow ( Qg) in the range of 0.08-0.24 mm/d; (3) ETg=0.64, 0.80, 0.55 mm/d in the dry seasons of 1997, 1998, 1999, respectively, and <0.05 mm/d in wet seasons; (4) temporally variable aquifer storage, which gains water in wet seasons shortly after rain showers and looses water in dry seasons mainly due to groundwater evapotranspiration. The dry season sap flow measurements of tree transpiration performed in the homogenous stands of Quercus ilex and Quercus pyrenaica indicated flux rates of 0.40 and 0.15 mm/d, respectively. The dry season tree transpiration for the entire catchment was ˜0.16 mm/d. The availability of dry season

  6. Spatio-temporal analysis of micro economic activities in Rome reveals patterns of mixed-use urban evolution

    CERN Document Server

    Fiasconaro, Alessandro; Nicosia, Vincenzo; Porta, Sergio; Latora, Vito

    2016-01-01

    Understanding urban growth is one with understanding how society evolves to satisfy the needs of its individuals in sharing a common space and adapting to the territory. We propose here a quantitative analysis of the historical development of a large urban area by investigating the spatial distribution and the age of commercial activities in the whole city of Rome. We find that the age of activities of various categories presents a very interesting double exponential trend, with a transition possibly related to the long-term economical effects determined by the oil crisis of the Seventies. The diversification of commercial categories, studied through various measures of entropy, shows, among other interesting features, a saturating behaviour with the density of activities. Moreover, different couples of commercial categories exhibit over the years a tendency to attract in space. Our results demonstrate that the spatio-temporal distribution of commercial activities can provide important insights on the urbanis...

  7. Testing the accuracy ratio of the Spatio-Temporal Epidemiological Modeler (STEM) through Ebola haemorrhagic fever outbreaks.

    Science.gov (United States)

    Baldassi, F; D'Amico, F; Carestia, M; Cenciarelli, O; Mancinelli, S; Gilardi, F; Malizia, A; DI Giovanni, D; Soave, P M; Bellecci, C; Gaudio, P; Palombi, L

    2016-05-01

    Mathematical modelling is an important tool for understanding the dynamics of the spread of infectious diseases, which could be the result of a natural outbreak or of the intentional release of pathogenic biological agents. Decision makers and policymakers responsible for strategies to contain disease, prevent epidemics and fight possible bioterrorism attacks, need accurate computational tools, based on mathematical modelling, for preventing or even managing these complex situations. In this article, we tested the validity, and demonstrate the reliability, of an open-source software, the Spatio-Temporal Epidemiological Modeler (STEM), designed to help scientists and public health officials to evaluate and create models of emerging infectious diseases, analysing three real cases of Ebola haemorrhagic fever (EHF) outbreaks: Uganda (2000), Gabon (2001) and Guinea (2014). We discuss the cases analysed through the simulation results obtained with STEM in order to demonstrate the capability of this software in helping decision makers plan interventions in case of biological emergencies. PMID:27029910

  8. Spatio-temporal variability of the polar middle atmosphere. Insights from over 30 years of research satellite observations

    Energy Technology Data Exchange (ETDEWEB)

    Lahoz, W.A.; Orsolini, Y.J.; Manney, G.L.; Minschwaner, K.; Allen, D.R.; Errera, Q.; Jackson, D.R.; Lambert, A.; Lee, J.; Pumphrey, H.; Schwartz, M.; Wu, D.

    2012-07-01

    We discuss the insights that research satellite observations from the last 30 years have provided on the spatio-temporal variability of the polar middle atmosphere. Starting from the time of the NASA LIMS (Limb Infrared Monitor of the Stratosphere) and TOMS (Total Ozone Mapping Spectrometer) instruments, both launched in 1978, we show how these observations have augmented our knowledge of the polar middle atmosphere, in particular how information on ozone and tracers has augmented our knowledge of: (i) the spatial and temporal characteristics of the wintertime polar stratosphere and the summertime circulation; and (ii) the roles of chemistry and transport in determining the stratospheric ozone distribution. We address the increasing joint use of observations and models, in particular in data assimilation, in contributing to this understanding. Finally, we outline requirements to allow continuation of the wealth of information on the polar middle atmosphere provided by research satellites over the last 30 years.(Author)

  9. Testing the accuracy ratio of the Spatio-Temporal Epidemiological Modeler (STEM) through Ebola haemorrhagic fever outbreaks.

    Science.gov (United States)

    Baldassi, F; D'Amico, F; Carestia, M; Cenciarelli, O; Mancinelli, S; Gilardi, F; Malizia, A; DI Giovanni, D; Soave, P M; Bellecci, C; Gaudio, P; Palombi, L

    2016-05-01

    Mathematical modelling is an important tool for understanding the dynamics of the spread of infectious diseases, which could be the result of a natural outbreak or of the intentional release of pathogenic biological agents. Decision makers and policymakers responsible for strategies to contain disease, prevent epidemics and fight possible bioterrorism attacks, need accurate computational tools, based on mathematical modelling, for preventing or even managing these complex situations. In this article, we tested the validity, and demonstrate the reliability, of an open-source software, the Spatio-Temporal Epidemiological Modeler (STEM), designed to help scientists and public health officials to evaluate and create models of emerging infectious diseases, analysing three real cases of Ebola haemorrhagic fever (EHF) outbreaks: Uganda (2000), Gabon (2001) and Guinea (2014). We discuss the cases analysed through the simulation results obtained with STEM in order to demonstrate the capability of this software in helping decision makers plan interventions in case of biological emergencies.

  10. Hydrogeochemistry and spatio-temporal changes of a tropical coastal wetland system: Veli-Akkulam Lake, Thiruvananthapuram, India

    Science.gov (United States)

    Sajinkumar, K. S.; Revathy, A.; Rani, V. R.

    2015-09-01

    The backwater of Veli-Akkulam, adjoining the Arabian Sea in the south-west part of Indian Peninsula, is a coastal wetland system and forms an integral part of the local ecosystem. In addition to the usual marine interactions, this water body is subjected to anthropogenic interference due to their proximity to the Thiruvananthapuram City urban agglomeration. This paper showcases how an urban agglomeration alters wetland system located within a tropical monsoonal environment. Water samples from this lake together with different feeder streams reveal that the lake is under the threat to eutrophication. A spatio-temporal analysis has shown that the lake and adjacent wetlands are shrinking in a fast pace. Over a period of about seven decades, the lake has shrunk by 28.05 % and the wetlands by 37.81 %. And hence, there is a pressing requirement of eco-management practices to be adopted to protect this lake.

  11. Participatory Bluetooth Sensing: A Method for Acquiring Spatio-Temporal Data about Participant Mobility and Interactions at Large Scale Events

    DEFF Research Database (Denmark)

    Stopczynski, Arkadiusz; Larsen, Jakob Eg; Jørgensen, Sune Lehmann;

    2013-01-01

    Acquisition of data to capture human mobility and interactions during large-scale events is a challenging task. In this paper we discuss a mobile sensing method for mapping the mobility of crowds at large scale events using a participatory Bluetooth sensing approach. This non-invasive technique...... for collecting spatio-temporal data about participant mobility and social interactions uses the capabilities of Bluetooth capable smartphones carried by participants. As a proof-of-concept we present a field study with deployment of the method in a large music festival with 130 000 participants where a small...... subset of participants installed Bluetooth sensing apps on their personal smartphones. Our software module uses location and Bluetooth scans to utilize smartphones as provisional scanners that are present with higher frequency in regions with high density of participants. We discuss the initial results...

  12. Resonant control of stochastic spatio-temporal dynamics in a tunnel diode by multiple time delayed feedback

    CERN Document Server

    Majer, Niels

    2008-01-01

    We study the control of noise-induced spatio-temporal current density patterns in a semiconductor nanostructure (double barrier resonant tunnelling diode) by multiple time-delayed feedback. We find much more pronounced resonant features of noise-induced oscillations compared to single time feedback, rendering the system more sensitive to variations in the delay time $\\tau$. The coherence of noise-induced oscillations measured by the correlation time exhibits sharp resonances as a function of $\\tau$, and can be strongly increased by optimal choices of $\\tau$. Similarly, the peaks in the power spectral density are sharpened. We provide analytical insight into the control mechanism by relating the correlation times and mean frequencies of noise-induced breathing oscillations to the stability properties of the deterministic stationary current density filaments under the influence of the control loop. Moreover, we demonstrate that the use of multiple time delays enlarges the regime in which the deterministic dynam...

  13. Spatio-temporal pattern formation, fractals, and chaos in conceptual ecological models as applied to coupled plankton-fish dynamics

    International Nuclear Information System (INIS)

    The current turn-of-the-century period witnesses the intensive use of the bioproducts of the World Ocean while at the same time calling for precautions to preserve its ecological stability. This requires that biophysical processes in aquatic systems be comprehensively explored and new methods for monitoring their dynamics be developed. While aquatic and terrestrial ecosystems have much in common in terms of their mathematical description, there are essential differences between them. For example, the mobility of oceanic plankton is mainly controlled by diffusion processes, whereas terrestrial organisms naturally enough obey totally different laws. This paper is focused on the processes underlying the dynamics of spatially inhomogeneous plankton communities. We demonstrate that conceptual reaction-diffusion mathematical models are an appropriate tool for investigating both complex spatio-temporal plankton dynamics and the fractal properties of planktivorous fish school walks. (reviews of topical problems)

  14. Climate-driven changes to the spatio-temporal distribution of the parasitic nematode, Haemonchus contortus, in sheep in Europe.

    Science.gov (United States)

    Rose, Hannah; Caminade, Cyril; Bolajoko, Muhammad Bashir; Phelan, Paul; van Dijk, Jan; Baylis, Matthew; Williams, Diana; Morgan, Eric R

    2016-03-01

    Recent climate change has resulted in changes to the phenology and distribution of invertebrates worldwide. Where invertebrates are associated with disease, climate variability and changes in climate may also affect the spatio-temporal dynamics of disease. Due to its significant impact on sheep production and welfare, the recent increase in diagnoses of ovine haemonchosis caused by the nematode Haemonchus contortus in some temperate regions is particularly concerning. This study is the first to evaluate the impact of climate change on H. contortus at a continental scale. A model of the basic reproductive quotient of macroparasites, Q0 , adapted to H. contortus and extended to incorporate environmental stochasticity and parasite behaviour, was used to simulate Pan-European spatio-temporal changes in H. contortus infection pressure under scenarios of climate change. Baseline Q0 simulations, using historic climate observations, reflected the current distribution of H. contortus in Europe. In northern Europe, the distribution of H. contortus is currently limited by temperatures falling below the development threshold during the winter months and within-host arrested development is necessary for population persistence over winter. In southern Europe, H. contortus infection pressure is limited during the summer months by increased temperature and decreased moisture. Compared with this baseline, Q0 simulations driven by a climate model ensemble predicted an increase in H. contortus infection pressure by the 2080s. In northern Europe, a temporal range expansion was predicted as the mean period of transmission increased by 2-3 months. A bimodal seasonal pattern of infection pressure, similar to that currently observed in southern Europe, emerges in northern Europe due to increasing summer temperatures and decreasing moisture. The predicted patterns of change could alter the epidemiology of H. contortus in Europe, affect the future sustainability of contemporary

  15. A Novel Method to Verify Multilevel Computational Models of Biological Systems Using Multiscale Spatio-Temporal Meta Model Checking.

    Science.gov (United States)

    Pârvu, Ovidiu; Gilbert, David

    2016-01-01

    Insights gained from multilevel computational models of biological systems can be translated into real-life applications only if the model correctness has been verified first. One of the most frequently employed in silico techniques for computational model verification is model checking. Traditional model checking approaches only consider the evolution of numeric values, such as concentrations, over time and are appropriate for computational models of small scale systems (e.g. intracellular networks). However for gaining a systems level understanding of how biological organisms function it is essential to consider more complex large scale biological systems (e.g. organs). Verifying computational models of such systems requires capturing both how numeric values and properties of (emergent) spatial structures (e.g. area of multicellular population) change over time and across multiple levels of organization, which are not considered by existing model checking approaches. To address this limitation we have developed a novel approximate probabilistic multiscale spatio-temporal meta model checking methodology for verifying multilevel computational models relative to specifications describing the desired/expected system behaviour. The methodology is generic and supports computational models encoded using various high-level modelling formalisms because it is defined relative to time series data and not the models used to generate it. In addition, the methodology can be automatically adapted to case study specific types of spatial structures and properties using the spatio-temporal meta model checking concept. To automate the computational model verification process we have implemented the model checking approach in the software tool Mule (http://mule.modelchecking.org). Its applicability is illustrated against four systems biology computational models previously published in the literature encoding the rat cardiovascular system dynamics, the uterine contractions of labour

  16. Spatio-temporal factors associated with meningococcal meningitis annual incidence at the health centre level in Niger, 2004-2010.

    Directory of Open Access Journals (Sweden)

    Juliette Paireau

    2014-05-01

    Full Text Available BACKGROUND: Epidemics of meningococcal meningitis (MM recurrently strike the African Meningitis Belt. This study aimed at investigating factors, still poorly understood, that influence annual incidence of MM serogroup A, the main etiologic agent over 2004-2010, at a fine spatial scale in Niger. METHODOLOGY/PRINCIPAL FINDINGS: To take into account data dependencies over space and time and control for unobserved confounding factors, we developed an explanatory Bayesian hierarchical model over 2004-2010 at the health centre catchment area (HCCA level. The multivariate model revealed that both climatic and non-climatic factors were important for explaining spatio-temporal variations in incidence: mean relative humidity during November-June over the study region (posterior mean Incidence Rate Ratio (IRR = 0.656, 95% Credible Interval (CI 0.405-0.949 and occurrence of early rains in March in a HCCA (IRR = 0.353, 95% CI 0.239-0.502 were protective factors; a higher risk was associated with the percentage of neighbouring HCCAs having at least one MM A case during the same year (IRR = 2.365, 95% CI 2.078-2.695, the presence of a road crossing the HCCA (IRR = 1.743, 95% CI 1.173-2.474 and the occurrence of cases before 31 December in a HCCA (IRR = 6.801, 95% CI 4.004-10.910. At the study region level, higher annual incidence correlated with greater geographic spread and, to a lesser extent, with higher intensity of localized outbreaks. CONCLUSIONS: Based on these findings, we hypothesize that spatio-temporal variability of MM A incidence between years and HCCAs result from variations in the intensity or duration of the dry season climatic effects on disease risk, and is further impacted by factors of spatial contacts, representing facilitated pathogen transmission. Additional unexplained factors may contribute to the observed incidence patterns and should be further investigated.

  17. Analysis of spatio-temporal pattern and driving force of land cover change using multi-temporal remote sensing images

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Landuse and land cover change is regarded as a good indicator that represents the impact of human activities on earth’s environment.When the large collection of multi-temporal satellite images has become available,it is possible to study a long-term historical process of land cover change.This study aims to investigate the spatio-temporal pattern and driving force of land cover change in the Pearl River Delta region in southern China,where the rapid development has been witnessed since 1980s.The fast economic growth has been associated with an accelerated expansion of urban landuse,which has been recorded by historical remote sensing images.This paper reports the method and outcome of the research that attempts to model spatio-temporal pattern of land cover change using multi-temporal satellite images.The classified satellite images were compared to detect the change from various landuse types to built-up areas.The trajectories of land cover change have then been established based on the time-series of the classified land cover classes.The correlation between the expansion of built-up areas and selected economic data has also been analysed for better understanding on the driving force of the rapid urbanisation process.The result shows that,since early 1990s,the dominant trend of land cover change has been from farmland to urban landuse.The relationship between economic growth indicator(measured by GDP)and built-up area can well fit into a linear regression model with correlation coefficients greater than 0.9.It is quite clear that cities or towns have been sprawling in general,demonstrating two growth models that were closely related to the economic development stages.

  18. High spatio-temporal resolution observations of crater lake temperatures at Kawah Ijen volcano, East Java, Indonesia

    Science.gov (United States)

    Lewicki, Jennifer L.; Caudron, Corentin; van Hinsberg, Vincent J.; Hilley, George E.

    2016-08-01

    The crater lake of Kawah Ijen volcano, East Java, Indonesia, has displayed large and rapid changes in temperature at point locations during periods of unrest, but measurement techniques employed to date have not resolved how the lake's thermal regime has evolved over both space and time. We applied a novel approach for mapping and monitoring variations in crater lake apparent surface ("skin") temperatures at high spatial (˜32 cm) and temporal (every 2 min) resolution at Kawah Ijen on 18 September 2014. We used a ground-based FLIR T650sc camera with digital and thermal infrared (TIR) sensors from the crater rim to collect (1) a set of visible imagery around the crater during the daytime and (2) a time series of co-located visible and TIR imagery at one location from pre-dawn to daytime. We processed daytime visible imagery with the Structure-from-Motion photogrammetric method to create a digital elevation model onto which the time series of TIR imagery was orthorectified and georeferenced. Lake apparent skin temperatures typically ranged from ˜21 to 33 °C. At two locations, apparent skin temperatures were ˜4 and 7 °C less than in situ lake temperature measurements at 1.5 and 5-m depth, respectively. These differences, as well as the large spatio-temporal variations observed in skin temperatures, were likely largely associated with atmospheric effects such as the evaporative cooling of the lake surface and infrared absorption by water vapor and SO2. Calculations based on orthorectified TIR imagery thus yielded underestimates of volcanic heat fluxes into the lake, whereas volcanic heat fluxes estimated based on in situ temperature measurements (68 to 111 MW) were likely more representative of Kawah Ijen in a quiescent state. The ground-based imaging technique should provide a valuable tool to continuously monitor crater lake temperatures and contribute insight into the spatio-temporal evolution of these temperatures associated with volcanic activity.

  19. Spatio-temporal modelling of climate-sensitive disease risk: Towards an early warning system for dengue in Brazil

    Science.gov (United States)

    Lowe, Rachel; Bailey, Trevor C.; Stephenson, David B.; Graham, Richard J.; Coelho, Caio A. S.; Sá Carvalho, Marilia; Barcellos, Christovam

    2011-03-01

    This paper considers the potential for using seasonal climate forecasts in developing an early warning system for dengue fever epidemics in Brazil. In the first instance, a generalised linear model (GLM) is used to select climate and other covariates which are both readily available and prove significant in prediction of confirmed monthly dengue cases based on data collected across the whole of Brazil for the period January 2001 to December 2008 at the microregion level (typically consisting of one large city and several smaller municipalities). The covariates explored include temperature and precipitation data on a 2.5°×2.5° longitude-latitude grid with time lags relevant to dengue transmission, an El Niño Southern Oscillation index and other relevant socio-economic and environmental variables. A negative binomial model formulation is adopted in this model selection to allow for extra-Poisson variation (overdispersion) in the observed dengue counts caused by unknown/unobserved confounding factors and possible correlations in these effects in both time and space. Subsequently, the selected global model is refined in the context of the South East region of Brazil, where dengue predominates, by reverting to a Poisson framework and explicitly modelling the overdispersion through a combination of unstructured and spatio-temporal structured random effects. The resulting spatio-temporal hierarchical model (or GLMM—generalised linear mixed model) is implemented via a Bayesian framework using Markov Chain Monte Carlo (MCMC). Dengue predictions are found to be enhanced both spatially and temporally when using the GLMM and the Bayesian framework allows posterior predictive distributions for dengue cases to be derived, which can be useful for developing a dengue alert system. Using this model, we conclude that seasonal climate forecasts could have potential value in helping to predict dengue incidence months in advance of an epidemic in South East Brazil.

  20. Estimation of ocean primary productivity and its spatio-temporal variation mechanism for East China Sea based on VGPM model

    Institute of Scientific and Technical Information of China (English)

    LIGuosheng; GAOPing; WANGFang; LIANGQiang

    2004-01-01

    According to calculation results of ocean chlorophyll concentration based on SeaWiFS data by SeaBAM model and synchronous ship-measured data, this research set up an improved model for Case I and Case Ⅱ water bodies respectively. The monthly chlorophyll distribution in the East China Sea in 1998 was obtained from this improved model on calculation results of SeaBAM. The euphotic depth distribution in 1998 in the East China Sea is calculated by using remote sensing data of K490 from SeaWiFS according to the relation between the euphotic depth and the oceanic diffuse attenuation coefficient. With data of ocean chlorophyll concentration, euphotic depth, ocean surface photosynthetic available radiation (PAR), daily photoperiod and optimal rate of daily carbon fixation within a water column, the monthly and annual primary productivity spatio-temporal distributions in the East China Sea in 1998 were obtained based on VGPM model. Based on analysis of those distributions, the conclusion can be drawn that there is a clear bimodality character of primary productivity in the monthly distribution in the East China Sea. In detail, the monthly distribution of primary productivity stays the lowest level in winter and rises rapidly to the peak in spring. It gets down a little in summer, and gets up a little in autumn. The daily average of primary productivity in the whole East China Sea is 560.03 mg/m2/d, which is far higher than the average of subtropical ocean areas. The annual average of primary productivity is 236.95 g/m2/a. The research on the seasonal variety mechanism of primary productivity shows that several factors that affect the spatio-temporal distribution may include the chlorophyll concentration distribution, temperature condition, the Yangtze River diluted water variety, the euphotic depth, ocean current variety, etc. But the main influencing factors may be different in each local sea area.

  1. Advancing of Land Surface Temperature Retrieval Using Extreme Learning Machine and Spatio-Temporal Adaptive Data Fusion Algorithm

    Directory of Open Access Journals (Sweden)

    Yang Bai

    2015-04-01

    Full Text Available As a critical variable to characterize the biophysical processes in ecological environment, and as a key indicator in the surface energy balance, evapotranspiration and urban heat islands, Land Surface Temperature (LST retrieved from Thermal Infra-Red (TIR images at both high temporal and spatial resolution is in urgent need. However, due to the limitations of the existing satellite sensors, there is no earth observation which can obtain TIR at detailed spatial- and temporal-resolution simultaneously. Thus, several attempts of image fusion by blending the TIR data from high temporal resolution sensor with data from high spatial resolution sensor have been studied. This paper presents a novel data fusion method by integrating image fusion and spatio-temporal fusion techniques, for deriving LST datasets at 30 m spatial resolution from daily MODIS image and Landsat ETM+ images. The Landsat ETM+ TIR data were firstly enhanced based on extreme learning machine (ELM algorithm using neural network regression model, from 60 m to 30 m resolution. Then, the MODIS LST and enhanced Landsat ETM+ TIR data were fused by Spatio-temporal Adaptive Data Fusion Algorithm for Temperature mapping (SADFAT in order to derive high resolution synthetic data. The synthetic images were evaluated for both testing and simulated satellite images. The average difference (AD and absolute average difference (AAD are smaller than 1.7 K, where the correlation coefficient (CC and root-mean-square error (RMSE are 0.755 and 1.824, respectively, showing that the proposed method enhances the spatial resolution of the predicted LST images and preserves the spectral information at the same time.

  2. A Novel Method to Verify Multilevel Computational Models of Biological Systems Using Multiscale Spatio-Temporal Meta Model Checking.

    Science.gov (United States)

    Pârvu, Ovidiu; Gilbert, David

    2016-01-01

    Insights gained from multilevel computational models of biological systems can be translated into real-life applications only if the model correctness has been verified first. One of the most frequently employed in silico techniques for computational model verification is model checking. Traditional model checking approaches only consider the evolution of numeric values, such as concentrations, over time and are appropriate for computational models of small scale systems (e.g. intracellular networks). However for gaining a systems level understanding of how biological organisms function it is essential to consider more complex large scale biological systems (e.g. organs). Verifying computational models of such systems requires capturing both how numeric values and properties of (emergent) spatial structures (e.g. area of multicellular population) change over time and across multiple levels of organization, which are not considered by existing model checking approaches. To address this limitation we have developed a novel approximate probabilistic multiscale spatio-temporal meta model checking methodology for verifying multilevel computational models relative to specifications describing the desired/expected system behaviour. The methodology is generic and supports computational models encoded using various high-level modelling formalisms because it is defined relative to time series data and not the models used to generate it. In addition, the methodology can be automatically adapted to case study specific types of spatial structures and properties using the spatio-temporal meta model checking concept. To automate the computational model verification process we have implemented the model checking approach in the software tool Mule (http://mule.modelchecking.org). Its applicability is illustrated against four systems biology computational models previously published in the literature encoding the rat cardiovascular system dynamics, the uterine contractions of labour

  3. Spatio-temporal declines in Philippine fisheries and its implications to coastal municipal fishers’ catch and income

    Directory of Open Access Journals (Sweden)

    Jonathan A Anticamara

    2016-03-01

    Full Text Available The problem of overexploitation in global fisheries is well-recognized. However, published assessment of fisheries spatio-temporal trends at the national scale is lacking for many high biodiversity developing countries, which is problematic since fisheries management is often implemented at the local or national levels. Here, we present the long-term spatio-temporal trends of Philippine fisheries production based on the landed national fish catch data (1980-2012 and fishers’ interviews. We found that the total Philippine fish catch volume (Metric Tons MT of most capture fisheries throughout the country has either stagnated or declined over the last three decades. The decline is even more prominent when evaluating fisheries trends at the provincial level, suggesting spatial serial depletion of the country’s fisheries. In contrast, the total Philippine fish catch value (US Dollars US$ or Philippine Pesos PHP has continued to increase over time, despite the declining fish catch volume. However, local municipal fishers are experiencing both low fish catch and income, contributing to observable poverty in many coastal communities in the Philippines. The various stakeholders of Philippine fisheries need to recognize the depleted state of Philippine fisheries, and learn from various experiences of collapsed and recovered fisheries from around the world, in order to recover the Philippines’ capture fisheries. Lessons from the literature on collapsed fisheries offer the following options for recovery: (1 regulate or reduce fisheries exploitation and other human activities impacting the fisheries to allow fisheries to rebuild or recover, (2 enforce effective networks of marine reserves, (3 engage fishers, consumers, and other stakeholders in fisheries management, (4 improve fisheries science, monitoring, and management capacities, and (5 provide alternative livelihood, skills, and improved education to fishers and their families.

  4. Long-Term and Annual Influence of Aswan Reservoir (Egypt) on the Local Seismicity: A Spatio-Temporal Statistical Analysis

    Science.gov (United States)

    Gahalaut, Kalpna; Hassoup, Awad; Hamed, Haggag; Kundu, Bhaskar; Gahalaut, Vineet

    2016-09-01

    Earthquakes continue to occur in the Kalabsha embayment region near the Aswan reservoir for more than three decades. These earthquakes, including the 1981 mainshock (M 5.3), have been considered to be reservoir triggered and pore pressure appears to be the main factor for their occurrence. However, influence of reservoir water levels on the earthquakes of the region, which is significant in the initial period, is reported to be weakening with time. We statistically analyse the influence of the reservoir water levels on spatio-temporal distribution of the earthquakes for the period 1982-2013. We divided the seismicity of various zones in different time windows, depending upon their clustering, and employed the power spectrum and singular spectrum analysis (SSA). The influence of long-term and annual variations in the water level on the seismicity is very much apparent in SSA. In the 45 years of reservoir filling history, episodes of water levels more than 170 m, which lead to filling of the embayment region, appear to be correlated with the increase in seismicity of the Aswan region. In the power spectrum analysis, a strong annual peak is found for water level time series. However, in the earthquake time series, on an average, a moderate and weak annual period cycle is present in the initial (1982-1988) and in the later (2001-2013) period, respectively. In the intermediate period (1989-2000) when the water level was the least in the embayment area, a very weak annual cycle is present. Non-consideration of spatio-temporal variation in the seismicity leads to erroneous and misleading results of no or weaker reservoir influence in the later period. This also highlights that the time and space dependent pore pressure diffusion process is likely responsible for earthquake triggering in the Aswan region.

  5. Large-scale spatio-temporal monitoring highlights hotspots of demersal fish diversity in the Mediterranean Sea

    Science.gov (United States)

    Granger, Victoria; Fromentin, Jean-Marc; Bez, Nicolas; Relini, Giulio; Meynard, Christine N.; Gaertner, Jean-Claude; Maiorano, Porzia; Garcia Ruiz, Cristina; Follesa, Cristina; Gristina, Michele; Peristeraki, Panagiota; Brind'Amour, Anik; Carbonara, Pierluigi; Charilaou, Charis; Esteban, Antonio; Jadaud, Angélique; Joksimovic, Aleksandar; Kallianiotis, Argyris; Kolitari, Jerina; Manfredi, Chiara; Massuti, Enric; Mifsud, Roberta; Quetglas, Antoni; Refes, Wahid; Sbrana, Mario; Vrgoc, Nedo; Spedicato, Maria Teresa; Mérigot, Bastien

    2015-01-01

    Increasing human pressures and global environmental change may severely affect the diversity of species assemblages and associated ecosystem services. Despite the recent interest in phylogenetic and functional diversity, our knowledge on large spatio-temporal patterns of demersal fish diversity sampled by trawling remains still incomplete, notably in the Mediterranean Sea, one of the most threatened marine regions of the world. We investigated large spatio-temporal diversity patterns by analysing a dataset of 19,886 hauls from 10 to 800 m depth performed annually during the last two decades by standardised scientific bottom trawl field surveys across the Mediterranean Sea, within the MEDITS program. A multi-component (eight diversity indices) and multi-scale (local assemblages, biogeographic regions to basins) approach indicates that only the two most traditional components (species richness and evenness) were sufficient to reflect patterns in taxonomic, phylogenetic or functional richness and divergence. We also put into question the use of widely computed indices that allow comparing directly taxonomic, phylogenetic and functional diversity within a unique mathematical framework. In addition, demersal fish assemblages sampled by trawl do not follow a continuous decreasing longitudinal/latitudinal diversity gradients (spatial effects explained up to 70.6% of deviance in regression tree and generalised linear models), for any of the indices and spatial scales analysed. Indeed, at both local and regional scales species richness was relatively high in the Iberian region, Malta, the Eastern Ionian and Aegean seas, meanwhile the Adriatic Sea and Cyprus showed a relatively low level. In contrast, evenness as well as taxonomic, phylogenetic and functional divergences did not show regional hotspots. All studied diversity components remained stable over the last two decades. Overall, our results highlight the need to use complementary diversity indices through different

  6. Spatial distribution of tree species governs the spatio-temporal interaction of leaf area index and soil moisture across a forested landscape.

    Directory of Open Access Journals (Sweden)

    Kusum J Naithani

    Full Text Available Quantifying coupled spatio-temporal dynamics of phenology and hydrology and understanding underlying processes is a fundamental challenge in ecohydrology. While variation in phenology and factors influencing it have attracted the attention of ecologists for a long time, the influence of biodiversity on coupled dynamics of phenology and hydrology across a landscape is largely untested. We measured leaf area index (L and volumetric soil water content (θ on a co-located spatial grid to characterize forest phenology and hydrology across a forested catchment in central Pennsylvania during 2010. We used hierarchical Bayesian modeling to quantify spatio-temporal patterns of L and θ. Our results suggest that the spatial distribution of tree species across the landscape created unique spatio-temporal patterns of L, which created patterns of water demand reflected in variable soil moisture across space and time. We found a lag of about 11 days between increase in L and decline in θ. Vegetation and soil moisture become increasingly homogenized and coupled from leaf-onset to maturity but heterogeneous and uncoupled from leaf maturity to senescence. Our results provide insight into spatio-temporal coupling between biodiversity and soil hydrology that is useful to enhance ecohydrological modeling in humid temperate forests.

  7. Spatio-temporal characterization of mid-infrared laser pulses with spatially encoded spectral shearing interferometry

    CERN Document Server

    Witting, Tobias; Tisch, John W G; Marangos, Jonathan P

    2012-01-01

    We report on the spatially resolved full amplitude and phase characterization of mid-infrared high intensity laser pulses generated in a three stage OPA. We use a spatially-encoded arrangement (SEA-)SPIDER with spectral filters for ancilla generation for spatially resolved characterization. Using five interchangeable filter sets we are able to characterize pulses from 1 to 2{\\mu}m with one single device with minimal adjustments.

  8. Lumped-equivalent circuit model for multi-stage cascaded magnetoelectric dual-tunable bandpass filter

    Institute of Scientific and Technical Information of China (English)

    张秋实; 朱锋杰; 周浩淼

    2015-01-01

    A lumped-equivalent circuit model of a novel magnetoelectric tunable bandpass filter, which is realized in the form of multi-stage cascading between a plurality of magnetoelectric laminates, is established in this paper for convenient analysis. The multi-stage cascaded filter is degraded to the coupling microstrip filter with only one magnetoelectric laminate and then compared with the existing experiment results. The comparison reveals that the insertion loss curves predicted by the degraded circuit model are in good agreement with the experiment results and the predicted results of the electromagnetic field simulation, thus the validity of the model is verified. The model is then degraded to the two-stage cascaded magneto-electric filter with two magnetoelectric laminates. It is revealed that if the applied external bias magnetic or electric fields on the two magnetoelectric laminates are identical, then the passband of the filter will drift under the changed external field; that is to say, the filter has the characteristics of external magnetic field tunability and electric field tunability. If the applied external bias magnetic or electric fields on two magnetoelectric laminates are different, then the passband will disappear so that the switching characteristic is achieved. When the same magnetic fields are applied to the laminates, the passband bandwidth of the two-stage cascaded magnetoelectric filter with two magnetoelectric laminates becomes nearly doubled in comparison with the passband filter which contains only one magnetoelectric laminate. The bandpass effect is also improved obviously. This research will provide a theoretical basis for the design, preparation, and application of a new high performance magnetoelectric tunable microwave device.

  9. Multiplex transmission system for gate drive signals of inverter circuit using surface acoustic wave filters

    Science.gov (United States)

    Suzuki, Akifumi; Ueda, Kensuke; Goka, Shigeyoshi; Wada, Keiji; Kakio, Shoji

    2016-07-01

    We propose and fabricate a multiplexed transmission system based on frequency-division multiple access (FDMA) with surface acoustic wave (SAW) filters. SAW filters are suitable for use in wide-gap switching devices and multilevel inverters because of their capability to operate at high temperatures, good electrical isolation, low cost, and high reliability. Our proposed system reduces the number of electrical signal wires needed to control each switching device and eliminates the need for isolation circuits, simplifying the transmission system and gate drive circuits. We successfully controlled two switching devices with a single coaxial line and confirmed the operation of a single-phase half-bridge inverter at a supply voltage of 100 V, and the total delay time to control the switching devices was less than 2.5 µs. Our experimental results validated our proposed system.

  10. Environmental and socio-economic change in Thailand: quantifying spatio-temporal risk factors of dengue to inform decision making

    Science.gov (United States)

    Rodo, X.; Lowe, R.; Karczewska-Gibert, A.; Cazelles, B.

    2013-12-01

    Dengue is a peri-urban mosquito-transmitted disease, ubiquitous in the tropics and the subtropics. The geographic distribution of dengue and its more severe form, dengue haemorrhagic fever (DHF), have expanded dramatically in the last decades and dengue is now considered to be the world's most important arboviral disease. Recent demographic changes have greatly contributed to the acceleration and spread of the disease along with uncontrolled urbanization, population growth and increased air travel, which acts as a mechanism for transporting and exchanging dengue viruses between endemic and epidemic populations. The dengue vector and virus are extremely sensitive to environmental conditions such as temperature, humidity and precipitation that influence mosquito biology, abundance and habitat and the virus replication speed. In order to control the spread of dengue and impede epidemics, decision support systems are required that take into account the multi-faceted array of factors that contribute to increased dengue risk. Due to availability of seasonal climate forecasts, that predict the average climate conditions for forthcoming months/seasons in both time and space, there is an opportunity to incorporate precursory climate information in a dengue decision support system to aid epidemic planning months in advance. Furthermore, oceanic indicators from teleconnected areas in the Pacific and Indian Ocean, that can provide some indication of the likely prevailing climate conditions in certain regions, could potentially extend predictive lead time in a dengue early warning system. In this paper we adopt a spatio-temporal Bayesian modelling framework for dengue in Thailand to support public health decision making. Monthly cases of dengue in the 76 provinces of Thailand for the period 1982-2012 are modelled using a multi-layered approach. Explanatory variables at various spatial and temporal resolutions are incorporated into a hierarchical model in order to make spatio-temporal

  11. Spatio-temporal Analysis of the Genetic Diversity of Arctic Rabies Viruses and Their Reservoir Hosts in Greenland.

    Directory of Open Access Journals (Sweden)

    Dennis Hanke

    2016-07-01

    Full Text Available There has been limited knowledge on spatio-temporal epidemiology of zoonotic arctic fox rabies among countries bordering the Arctic, in particular Greenland. Previous molecular epidemiological studies have suggested the occurrence of one particular arctic rabies virus (RABV lineage (arctic-3, but have been limited by a low number of available samples preventing in-depth high resolution phylogenetic analysis of RABVs at that time. However, an improved knowledge of the evolution, at a molecular level, of the circulating RABVs and a better understanding of the historical perspective of the disease in Greenland is necessary for better direct control measures on the island. These issues have been addressed by investigating the spatio-temporal genetic diversity of arctic RABVs and their reservoir host, the arctic fox, in Greenland using both full and partial genome sequences. Using a unique set of 79 arctic RABV full genome sequences from Greenland, Canada, USA (Alaska and Russia obtained between 1977 and 2014, a description of the historic context in relation to the genetic diversity of currently circulating RABV in Greenland and neighboring Canadian Northern territories has been provided. The phylogenetic analysis confirmed delineation into four major arctic RABV lineages (arctic 1-4 with viruses from Greenland exclusively grouping into the circumpolar arctic-3 lineage. High resolution analysis enabled distinction of seven geographically distinct subclades (3.I - 3.VII with two subclades containing viruses from both Greenland and Canada. By combining analysis of full length RABV genome sequences and host derived sequences encoding mitochondrial proteins obtained simultaneously from brain tissues of 49 arctic foxes, the interaction of viruses and their hosts was explored in detail. Such an approach can serve as a blueprint for analysis of infectious disease dynamics and virus-host interdependencies. The results showed a fine-scale spatial population

  12. Prediction of high spatio-temporal resolution land surface temperature under cloudy conditions using microwave vegetation index and ANN

    Science.gov (United States)

    Shwetha, H. R.; Kumar, D. Nagesh

    2016-07-01

    Land Surface Temperature (LST) with high spatio-temporal resolution is in demand for hydrology, climate change, ecology, urban climate and environmental studies, etc. Moderate Resolution Imaging Spectroradiometer (MODIS) is one of the most commonly used sensors owing to its high spatial and temporal availability over the globe, but is incapable of providing LST data under cloudy conditions, resulting in gaps in the data. In contrast, microwave measurements have a capability to penetrate under clouds. The current study proposes a methodology by exploring this property to predict high spatio-temporal resolution LST under cloudy conditions during daytime and nighttime without employing in-situ LST measurements. To achieve this, Artificial Neural Networks (ANNs) based models are employed for different land cover classes, utilizing Microwave Polarization Difference Index (MPDI) at finer resolution with ancillary data. MPDI was derived using resampled (from 0.25° to 1 km) brightness temperatures (Tb) at 36.5 GHz channel of dual polarization from Advance Microwave Scanning Radiometer (AMSR)-Earth Observing System and AMSR2 sensors. The proposed methodology is tested over Cauvery basin in India and the performance of the model is quantitatively evaluated through performance measures such as correlation coefficient (r), Nash Sutcliffe Efficiency (NSE) and Root Mean Square Error (RMSE). Results revealed that during daytime, AMSR-E(AMSR2) derived LST under clear sky conditions corresponds well with MODIS LST resulting in values of r ranging from 0.76(0.78) to 0.90(0.96), RMSE from 1.76(1.86) K to 4.34(4.00) K and NSE from 0.58(0.61) to 0.81(0.90) for different land cover classes. During nighttime, r values ranged from 0.76(0.56) to 0.87(0.90), RMSE from 1.71(1.70) K to 2.43(2.12) K and NSE from 0.43(0.28) to 0.80(0.81) for different land cover classes. RMSE values found between predicted LST and MODIS LST during daytime under clear sky conditions were within acceptable

  13. Spatio-temporal variability of droughts and terrestrial water storage over Lake Chad Basin using independent component analysis

    Science.gov (United States)

    Ndehedehe, Christopher E.; Agutu, Nathan O.; Okwuashi, Onuwa; Ferreira, Vagner G.

    2016-09-01

    Lake Chad has recently been perceived to be completely desiccated and almost extinct due to insufficient published ground observations. Given the high spatial variability of rainfall in the region, and the fact that extreme climatic conditions (for example, droughts) could be intensifying in the Lake Chad basin (LCB) due to human activities, a spatio-temporal approach to drought analysis becomes essential. This study employed independent component analysis (ICA), a fourth-order cumulant statistics, to decompose standardised precipitation index (SPI), standardised soil moisture index (SSI), and terrestrial water storage (TWS) derived from Gravity Recovery and Climate Experiment (GRACE) into spatial and temporal patterns over the LCB. In addition, this study uses satellite altimetry data to estimate variations in the Lake Chad water levels, and further employs relevant climate teleconnection indices (El-Niño Southern Oscillation-ENSO, Atlantic Multi-decadal Oscillation-AMO, and Atlantic Meridional Mode-AMM) to examine their links to the observed drought temporal patterns over the basin. From the spatio-temporal drought analysis, temporal evolutions of SPI at 12 month aggregation show relatively wet conditions in the last two decades (although with marked alterations) with the 2012-2014 period being the wettest. In addition to the improved rainfall conditions during this period, there was a statistically significant increase of 0.04 m/yr in altimetry water levels observed over Lake Chad between 2008 and 2014, which confirms a shift in the hydrological conditions of the basin. Observed trend in TWS changes during the 2002-2014 period shows a statistically insignificant increase of 3.0 mm/yr at the centre of the basin, coinciding with soil moisture deficit indicated by the temporal evolutions of SSI at all monthly accumulations during the 2002-2003 and 2009-2012 periods. Further, SPI at 3 and 6 month scales indicated fluctuating drought conditions at the extreme south

  14. A new perspective on the spatio-temporal variability of soil moisture: temporal dynamics versus time invariant contributions

    Directory of Open Access Journals (Sweden)

    H. Mittelbach

    2012-01-01

    Full Text Available Knowledge about the spatio-temporal variability of soil moisture is essential to understand and predict processes in climate science and hydrology. A significant body of literature exists on the characterization of the spatial variability and the ranks stability (also called temporal stability of absolute soil moisture. Yet previous studies were generally based on short-term measurement campaigns and did not distinguish the respective contributions of time varying and time invariant components to these quantities. In this study, we investigate this issue using measurements from 14 grassland sites of the SwissSMEX soil moisture network (spatial extent of approx. 150 × 210 km over the time period May 2010 to July 2011. We thereby decompose the spatial variance of absolute soil moisture over time in contributions from the spatial variance of the mean soil moisture at all sites (which is time invariant, and components that vary over time and are related to soil moisture dynamics. These include the spatial variance of the temporal soil moisture anomalies at all sites and the covariance between the sites' anomalies to the spatial mean at a given time step and those for the temporal mean values. The analysis demonstrates that the time invariant term contributes 50–160% (on average 94% of the spatial soil moisture variance at any point in time, while the covariance term generally contributes negatively to the spatial variance. On the other hand the spatial variance of the temporal anomalies, which is overall most relevant for climate and hydrological applications because it is directly related to soil moisture dynamics, is relatively limited and constitutes at most 2–30% (on average 9% of the total variance. Nonetheless, this term is not negligible compared to the temporal anomalies of the spatial mean. These results suggest that a large fraction of the spatial variability of soil moisture assessed from short-term campaign is time invariant

  15. A new perspective on the spatio-temporal variability of soil moisture: temporal dynamics versus time-invariant contributions

    Directory of Open Access Journals (Sweden)

    H. Mittelbach

    2012-07-01

    Full Text Available Knowledge about the spatio-temporal variability of soil moisture is essential to understand and predict processes in climate science and hydrology. A significant body of literature exists on the characterization of the spatial variability and the rank stability (also called temporal stability of absolute soil moisture. Yet previous studies were generally based on short-term measurement campaigns and did not distinguish the respective contributions of time-varying and time-invariant components to these quantities. In this study, we investigate this issue using measurements from 14 grassland sites of the SwissSMEX soil moisture network (spatial extent of approx. 150 × 210 km over the time period May 2010 to July 2011. We thereby decompose the spatial variance of absolute soil moisture over time in contributions from the spatial variance of the mean soil moisture at all sites (which is time-invariant, and components that vary over time and are related to soil moisture dynamics. These include the spatial variance of the temporal soil moisture anomalies at all sites and the covariance between the site anomalies to the spatial mean at a given time step and those for the temporal mean values. The analysis demonstrates that the time-invariant term contributes 50–160% (on average 94% of the spatial soil moisture variance at any point in time, while the covariance term generally contributes negatively to the spatial variance. On the other hand, the spatial variance of the temporal anomalies, which is overall most relevant for climate and hydrological applications because it is related to soil moisture dynamics, is relatively limited and constitutes at most 2–30% (on average 9% of the total variance. Nonetheless, this term is not negligible compared to the temporal anomalies of the spatial mean. These results suggest that a large fraction of the spatial variability of soil moisture assessed from short-term campaign may be time-invariant if other

  16. Multilevel Methodology for Simulation of Spatio-Temporal Systems with Heterogeneous Activity; Application to Spread of Valley Fever Fungus

    Science.gov (United States)

    Jammalamadaka, Rajanikanth

    2009-01-01

    This report consists of a dissertation submitted to the faculty of the Department of Electrical and Computer Engineering, in partial fulfillment of the requirements for the degree of Doctor of Philosophy, Graduate College, The University of Arizona, 2008. Spatio-temporal systems with heterogeneity in their structure and behavior have two major problems associated with them. The first one is that such complex real world systems extend over very large spatial and temporal domains and consume so many computational resources to simulate that they are infeasible to study with current computational platforms. The second one is that the data available for understanding such systems is limited because they are spread over space and time making it hard to obtain micro and macro measurements. This also makes it difficult to get the data for validation of their constituent processes while simultaneously considering their global behavior. For example, the valley fever fungus considered in this dissertation is spread over a large spatial grid in the arid Southwest and typically needs to be simulated over several decades of time to obtain useful information. It is also hard to get the temperature and moisture data (which are two critical factors on which the survival of the valley fever fungus depends) at every grid point of the spatial domain over the region of study. In order to address the first problem, we develop a method based on the discrete event system specification which exploits the heterogeneity in the activity of the spatio-temporal system and which has been shown to be effective in solving relatively simple partial differential equation systems. The benefit of addressing the first problem is that it now makes it feasible to address the second problem. We address the second problem by making use of a multilevel methodology based on modeling and simulation and systems theory. This methodology helps us in the construction of models with different resolutions (base and

  17. High spatio-temporal resolution observations of crater-lake temperatures at Kawah Ijen volcano, East Java, Indonesia

    Science.gov (United States)

    Lewicki, Jennifer L.; Corentin Caudron,; Vincent van Hinsberg,; George Hilley,

    2016-01-01

    The crater lake of Kawah Ijen volcano, East Java, Indonesia, has displayed large and rapid changes in temperature at point locations during periods of unrest, but measurement techniques employed to-date have not resolved how the lake’s thermal regime has evolved over both space and time. We applied a novel approach for mapping and monitoring variations in crater-lake apparent surface (“skin”) temperatures at high spatial (~32 cm) and temporal (every two minutes) resolution at Kawah Ijen on 18 September 2014. We used a ground-based FLIR T650sc camera with digital and thermal infrared (TIR) sensors from the crater rim to collect (1) a set of visible imagery around the crater during the daytime and (2) a time series of co-located visible and TIR imagery at one location from pre-dawn to daytime. We processed daytime visible imagery with the Structure-from-Motion photogrammetric method to create a digital elevation model onto which the time series of TIR imagery was orthorectified and georeferenced. Lake apparent skin temperatures typically ranged from ~21 to 33oC. At two locations, apparent skin temperatures were ~ 4 and 7 oC less than in-situ lake temperature measurements at 1.5 and 5 m depth, respectively. These differences, as well as the large spatio-temporal variations observed in skin temperatures, were likely largely associated with atmospheric effects such as evaporative cooling of the lake surface and infrared absorption by water vapor and SO2. Calculations based on orthorectified TIR imagery thus yielded underestimates of volcanic heat fluxes into the lake, whereas volcanic heat fluxes estimated based on in-situ temperature measurements (68 to 111 MW) were likely more representative of Kawah Ijen in a quiescent state. The ground-based imaging technique should provide a valuable tool to continuously monitor crater-lake temperatures and contribute insight into the spatio-temporal evolution of these temperatures associated with volcanic activity.

  18. Resolving Trends in Antarctic Ice Sheet Mass Loss and Glacio-isostatic Adjustment Through Spatio-temporal Source-separation

    Science.gov (United States)

    Bamber, J. L.; Schoen, N.; Zammit-Mangion, A.; Rougier, J.; Flament, T.; Luthcke, S. B.; Petrie, E. J.; Rémy, F.

    2013-12-01

    There remains considerable inconsistency between different methods and approaches for determining ice mass trends for Antarctica from satellite observations. There are three approaches that can provide near global coverage for mass trends: altimetry, gravimetry and mass budget calculations. All three approaches suffer from a source separation problem where other geophysical processes limit the capability of the method to resolve the origin and magnitude of a mass change. A fourth approach, GPS vertical motion, provides localised estimates of mass change due to elastic uplift and an indirect estimate of GIA. Each approach has different source separation issues and different spatio-temporal error characteristics. In principle, it should be possible to combine the data and process covariances to minimize the uncertainty in the solution and to produce robust, posterior errors for the trends. In practice, this is a challenging problem in statistics because of the large number of degrees of freedom, the variable spatial and temporal sampling between the different observations and the fact that some processes remain under-sampled, such as firn compaction. Here, we present a novel solution to this problem using the latest methods in statistical modelling of spatio-temporal processes. We use Bayesian hierarchical modelling and employ stochastic partial differential equations to capture our physical understanding of the key processes that influence our observations. Due to the huge number of observations involved (> 10^8) methods are required to reduce the dimensionality of the problem and care is required in treatment of the observations as they are not independent. Here, we focus mainly on the results rather than the full suite of methods and we present time evolving fields of surface mass balance, ice dynamic-driven mass loss, and firn compaction for the period 2003-2009, derived from a combination of ICESat, ENVISAT, GRACE, InSAR, GPS and regional climate model output

  19. The effect of neighbourhood definitions on spatio-temporal models of disease outbreaks: Separation distance versus range overlap.

    Science.gov (United States)

    Laffan, Shawn W; Wang, Zhaoyuan; Ward, Michael P

    2011-12-01

    The definition of the spatial relatedness between infectious and susceptible animal groups is a fundamental component of spatio-temporal modelling of disease outbreaks. A common neighbourhood definition for disease spread in wild and feral animal populations is the distance between the centroids of neighbouring group home ranges. This distance can be used to define neighbourhood interactions, and also to describe the probability of successful disease transmission. Key limitations of this approach are (1) that a susceptible neighbour of an infectious group with an overlapping home range - but whose centroid lies outside the home range of an infectious group - will not be considered for disease transmission, and (2) the degree of overlap between the home ranges is not taken into account for those groups with centroids inside the infectious home range. We assessed the impact of both distance-based and range overlap methods of disease transmission on model-predicted disease spread. Range overlap was calculated using home ranges modelled as circles. We used the Sirca geographic automata model, with the population data from a nine-county study area in Texas that we have previously described. For each method we applied 100 model repetitions, each of 100 time steps, to 30 index locations. The results show that the rate of disease spread for the range-overlap method is clearly less than the distance-based method, with median outbreaks modelled using the latter being 1.4-1.45 times larger. However, the two methods show similar overall trends in the area infected, and the range-overlap median (48 and 120 for cattle and pigs, respectively) falls within the 5th-95th percentile range of the distance-based method (0-96 and 0-252 for cattle and pigs, respectively). These differences can be attributed to the calculation of the interaction probabilities in the two methods, with overlap weights generally resulting in lower interaction probabilities. The definition of spatial

  20. [Spatio-temporal variability of habitat quality in Beijing-Tianjin-Hebei Area based on land use change].

    Science.gov (United States)

    Wu, Jian-sheng; Cao, Qi-wen; Shi, Shu-qin; Huang, Xiu-lan; Lu, Zhi-qiang

    2015-11-01

    Land use change is the core content of global change. To achieve sustainable land use planning, it is necessary to evaluate the habitat quality pattern and its spatio-temporal variation resulted from land use change, which can provide basis for the formulation of land management policy. Based on the analysis of land use change from 2000 to 2010, this study investigated the spatio-temporal variation of habitat quality pattern of Beijing-Tianjin-Hebei Area. We used the watershed profile sampling points and spatial autocorrelation analysis based on watershed subdivision. The results showed that the main land use change types from 2000 to 2010 in this area included the transition from cultivated land to construction land, the transition between forest and grassland, and the transition from water bodies to cultivated land. This land use/cover change process led to the decrease of heterogeneity of landscape structure and increase of fragmentation. The overall spatial pattern of habitat quality was that southeast and south areas were relatively lower, while north and west areas were relatively higher. The analysis based on watershed profile showed that the habitat quality of each watershed presented significant difference in each part. Habitat quality of most sampling points degraded in a way, while some improved compared with 2000. In general, the habitat quality of the bottom part of Luanhe River basin, the medium part of Bai-Chaobai-Chaobaixin River basin, the medium and the bottom part of Yongding River basin and medium part of Laozhang-Fudongpai- Beipai River basin were poor and volatile, while other parts were relatively good. There was a decreasing agglomeration characteristic of distribution of habitat quality in Beijing-Tianjin-Hebei Area under the disturbance of human activities. Areas of high habitat quality in 2000 were mainly located in Luanhe River basin and top part of Baihe basin. Areas of low habitat quality were mainly located in medium and bottom part