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Sample records for ciliates euplotes minuta

  1. Dealing with the presence of the ciliate Euplotes sp. in cultures of the copepod Acartia tonsa

    DEFF Research Database (Denmark)

    Drillet, Guillaume; Dutz, Jörg

    2014-01-01

    Ciliates in live feed cultures can be a pest that lower production yields. This could dramatically affect the management and success of copepod cultures. In this study, we investigated the effect of the ciliate Euplotes sp. on egg production, specific egg production and egg hatching success...... of Acartia tonsa fed with Rhodomonas salina. We found that at a concentration of 2 cells ml-1, Euplotes sp. had no effect on the production and hatching success of eggs but increased/decreased the mortality/quality of non-subitaneous eggs. Euplotes sp. had a good fatty acid profile containing high proportion...... of unsaturated fatty acids, but the amount of fatty acids compared to their carbon weight was very low and, therefore, it was considered as a poor food source. We propose a short-term interruption of food supply to copepod cultures in order to mitigate bloom formation of ciliates. This will force copepods...

  2. Thermodynamic Stability of Psychrophilic and Mesophilic Pheromones of the Protozoan Ciliate Euplotes

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    Kurt Wüthrich

    2013-01-01

    Full Text Available Three psychrophilic protein pheromones (En-1, En-2 and En-6 from the polar ciliate, Euplotes nobilii, and six mesophilic pheromones (Er-1, Er-2, Er-10, Er-11, Er-22 and Er-23 from the temperate-water sister species, Euplotes raikovi, were studied in aqueous solution for their thermal unfolding and refolding based on the temperature dependence of their circular dichroism (CD spectra. The three psychrophilic proteins showed thermal unfolding with mid points in the temperature range 55–70 °C. In contrast, no unfolding was observed for any of the six mesophilic proteins and their regular secondary structures were maintained up to 95 °C. Possible causes of these differences are discussed based on comparisons of the NMR structures of the nine proteins.

  3. Population dynamics of marine ciliate Euplotes vannus (Protozoa, Ciliophora) in different artificial seawaters

    Institute of Scientific and Technical Information of China (English)

    XU Henglong; ZHU Mingzhuang; JIANG Yong; GAO Shan; MIN Gi-Sik; AL-RASHEID Khaled A.S.

    2011-01-01

    To study population dynamics of marine ciliates in different artificial seawaters (ASW), the population growth dynamics of a common marine ciliate Euplotes vannus were investigated using beef extract media and rice media for five types of ASW and natural seawater (NSW). The results show that: (1) the population growth rate was in the order of NSW>Flack ASW>Nakamula ASW>Schmadz ASW>Oshima ASW>Subow ASW and was considerably higher in rice media than in beef extract media (apart from Subow ASW); (2) the maximum density of E. vannus in stationary phase in each treatment was ranked as Flack ASW>Nakamula ASW>Schmadz ASW>NSW>Oshima ASW>Subow ASW, and was again higher in rice media than in beef extract media (except for Subow ASW); (3) the exponential and stationary phases were longer in rice media than in beef extract media; (4) strains of E. vannus that had been domesticated for >1 year in ASW grew significantly slower, with lower maximum density and longer stationary phase than those isolated and maintained in NSW. It was demonstrated that: (1) E. vannus may grow well in Flack, Nakamula and Schmads ASW compared with NSW (mainly in terms of growth rate); and (2) Oshima ASW is the preferred choice for stock cultures of E. vannus, but the ASWs Flack, Nakamula and Schmadz are preferred for mass culture. These findings suggest that these three ASWs are effective for the cultivation of marine protozoa for experimental studies on ecology, toxicology and molecular biology.

  4. Electrochemical study of the interaction between Eu3+ and ciliate Euplotes octocarinatus centrin

    International Nuclear Information System (INIS)

    A new species was formed when protein P23 (one segment of ciliate Euplotes octocarinatus centrin) was added to a solution of Eu3+. The interaction between P23 and Eu3+ was investigated by cyclic voltammetry, pulse voltammetry and electrochemical impedance spectroscopy in 10 mM N-2-hydroxyethylpiperazine-N-2-ethanesulfonic acid (HEPES) buffer (pH 7.4) using a pyrolytic graphite electrode. The formal potential (Eo') of Eu3+ shifted from -0.61 to -0.84 V (versus saturated calomel electrode) after P23 was added to the Eu3+ solution. The diffusion coefficient (D), the charge-transfer coefficient (α) and the electron transfer standard rate constant (ks) were obtained in the absence and the presence of P23. The affinity constant of Eu3+ and P23 was determined to be (1.89 ± 0.51) x 104 M-1. The electrochemical investigation of europium bound to the protein provided useful data for the studies of calcium-binding proteins.

  5. Ecological functions of ciliated protozoa in marine ecosystem: effects of ammonium on the population growth of Euplotes vannus

    Institute of Scientific and Technical Information of China (English)

    Xu Henglong; Song Weibo; Zhu Mingzhuang; Wang Mei; Ma Honggang; Xu Xiaozhong

    2005-01-01

    The effects of ammonium on the population growth of the marine ciliate, Euplotes vannus, were examined using ecotoxicological method. It is showed that ammonium exerts inhibitory effects on the growth of the ciliate populations in a concentration-dependent way. Statistical analysis reveals that the population growth dynamics exposed to ammonium-N concentration over 100mg/L are significantly different from that in the control at P<0.05 level. Linear regression determined that the 24h, 36h, 48h, 60h, 72h and 84h IC50 values of ammonium-N are 19.68, 201.51, 167.49, 47.86, 50.43 and 43.11 concentration over 100mg/L, respectively (P<0.05; pH 8.2; salinity 28 ppt; temperature, 25℃). The results indicate that the tolerance to ammonium in E. vannus is considerably higher than that of the larvae or juveniles of some metozoa, such as cultured prawns and oysters. Therefore, it is believed that the high tolerance to ammonium is necessary for ciliated protozoa to play positive roles in maintaining and improving water quality in marine ecosystems, especially in the intensive aquaculture waters with high-level ammonium. In addition, the correlation between IC50 values and exposure time was discussed.

  6. The water-born protein pheromones of the polar protozoan ciliate, Euplotes nobilii: Coding genes and molecular structures

    Science.gov (United States)

    Vallesi, Adriana; Alimenti, Claudio; Di Giuseppe, Graziano; Dini, Fernando; Pedrini, Bill; Wüthrich, Kurt; Luporini, Pierangelo

    2010-08-01

    The protozoan ciliate Euplotes nobilii found in Antarctic and Arctic coastal waters relies on secretion of water-soluble cell type-specific signal proteins (pheromones) to regulate its vegetative growth and sexual mating. For three of these psychrophilic pheromones we previously determined the three-dimensional structures by nuclear magnetic resonance (NMR) spectroscopy with protein solutions purified from the natural sources, which led to evidence that their adaptation to cold is primarily achieved by increased flexibility through an extension of regions free of regular secondary structures, and by increased exposure of negative charges on the protein surface. Then we cloned the coding genes of these E. nobilii pheromones from the transcriptionally active cell somatic nucleus (macronucleus) and characterized the full-length sequences. These sequences all contain an open reading frame of 252-285 nucleotides, which is specific for a cytoplasmic pheromone precursor that requires two proteolytic cleavages to remove a signal peptide and a pro segment before release of the mature protein into the extracellular environment. The 5‧ and 3‧ non-coding regions are two- to three-fold longer than the coding region and appear to be tightly conserved, probably in relation to the inclusion of intron sequences destined to be alternatively removed to play key regulatory roles in the mechanism of the pheromone gene expression.

  7. Primary structure of the mating pheromone Er-1 of the ciliate Euplotes raikovi.

    Science.gov (United States)

    Raffioni, S; Luporini, P; Chait, B T; Disper, S S; Bradshaw, R A

    1988-12-01

    The complete amino acid sequence of the mating pheromone Er-1 purified from Euplotes raikovi homozygous for mat-1 was determined by automated Edman degradation of the whole protein and peptides generated by cyanogen bromide, trypsin, Staphylococcus aureus V8 protease, and chymotrypsin. The proposed sequence is: Asp-Ala-Cys-Glu-Gln-Ala-Ala-Ile-Gln-Cys-Val-Glu-Ser-Ala-Cys-Glu-Ser-Leu- Cys-Thr-Glu-Gly-Glu-Asp-Arg-Thr-Gly-Cys-Tyr-Met-Tyr-Ile-Tyr-Ser-Asn-Cys- Pro-Pro-Tyr-Val The calculated molecular weight is 4411.0, which is in agreement with the averaged mass of 4410.2 obtained by fission fragment ionization mass spectrometry. Previously reported values of the native molecular weight, determined by gel filtration, have ranged from 9,000 to 12,000. Thus, the native structure is likely a dimer (or larger aggregate) of identical subunits with the three disulfide bonds present occurring as intrachain links. Secondary structure predictions suggest a helical structure at the amino terminus. A comparison of the Er-1 amino acid sequence with known protein sequences did not reveal any significant similarities. PMID:3142868

  8. The use of multiple endpoints to assess cellular responses to environmental contaminants in the interstitial marine ciliate Euplotes crassus.

    Science.gov (United States)

    Gomiero, A; Sforzini, S; Dagnino, A; Nasci, C; Viarengo, A

    2012-06-15

    This paper presents the results of investigations on the suitability of Euplotes crassus, an interstitial marine ciliate, to be used as model organism in ecotoxicology and thereafter to evaluate the toxicity of estuarine and coastal sediments upon laboratory exposure. Nowadays, anthropogenic activities have resulted in accumulation of metals and organic pollutants in the environment as well as in the food chain hence leading to serious ecological and human health problems. This may pose a risk to benthic and epibenthic organisms and it is crucial to discover toxicity tests that will identify adverse effects of sediment-associated chemicals on benthic organisms. Due to their nature as a eukaryotic cell/organism and their position in the food web, ciliated protozoa are suitable models for evaluating the effects of pollution on aquatic communities. Lethal and sublethal effects of exposure to inorganic and organic pollutants were tested on the cell mortality, replication rate, lysosomal membrane stability and endocytosis rate of E. crassus. Increasing nominal concentrations of individual and mixtures of mercury, copper, and benzo(a)pyrene were investigated in this study as they might be bioavailable in naturally occurring polluted sites. A significant decrease in the mean replication rate (ppollutants. At the same time, significant decreases of lysosomal membrane stability (ppollutants were performed showing both inorganic-organic and inorganic-inorganic additive and/or antagonist effects. Moreover, medium salinity was also varied to mimic estuarine-like environmental conditions linking biological response to ionic strengths. Under these conditions significant increases of both endocytosis rate and lysosomal membrane stability were observed and related to the increment of some Hg- and Cu-related toxic complexes. The studied biomarkers were always able to discriminate between the effects of organic and inorganic pollutants. Together with the short time and simplicity of

  9. Structures, Biological Activities and Phylogenetic Relationships of Terpenoids from Marine Ciliates of the Genus Euplotes

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    Fernando Dini

    2010-07-01

    Full Text Available In the last two decades, large scale axenic cell cultures of the marine species comprising the family Euplotidae have resulted in the isolation of several new classes of terpenoids with unprecedented carbon skeletons including the (i euplotins, highly strained acetylated sesquiterpene hemiacetals; (ii raikovenals, built on the bicyclo[3.2.0]heptane ring system; (iii rarisetenolides and focardins containing an octahydroazulene moiety; and (iv vannusals, with a unique C30 backbone. Their complex structures have been elucidated through a combination of nuclear magnetic resonance spectroscopy, mass spectrometry, molecular mechanics and quantum chemical calculations. Despite the limited number of biosynthetic experiments having been performed, the large diversity of ciliate terpenoids has facilitated the proposal of biosynthetic pathways whereby they are produced from classical linear precursors. Herein, the similarities and differences emerging from the comparison of the classical chemotaxonomy approach based on secondary metabolites, with species phylogenesis based on genetic descriptors (SSU-rDNA, will be discussed. Results on the interesting ecological and biological properties of ciliate terpenoids are also reported.

  10. The protein pheromone Er-1 of the ciliate Euplotes raikovi stimulates human T-cell activity: Involvement of interleukin-2 system

    International Nuclear Information System (INIS)

    Water-soluble protein signals (pheromones) of the ciliate Euplotes have been supposed to be functional precursors of growth factors and cytokines that regulate cell–cell interaction in multi-cellular eukaryotes. This work provides evidence that native preparations of the Euplotes raikovi pheromone Er-1 (a helical protein of 40 amino acids) specifically increases viability, DNA synthesis, proliferation, and the production of interferon-γ, tumor necrosis factor-α, interleukin (IL)-1β, IL-2, and IL-13 in human Jurkat T-cells. Also, Er-1 significantly decreases the mRNA levels of the β and γ subunits of IL-2 receptor (IL-2R), while the mRNA levels of the α subunit appeared to be not affected. Jurkat T-cell treatments with Er-1 induced the down-regulation of the IL-2Rα subunit by a reversible and time-dependent endocytosis, and increased the levels of phosphorylation of the extracellular signal-regulated kinases (ERK). The cell-type specificity of these effects was supported by the finding that Er-1, although unable to directly influence the growth of human glioma U-373 cells, induced Jurkat cells to synthesize and release factors that, in turn, inhibited the U-373 cell proliferation. Overall, these findings imply that Er-1 coupling to IL-2R and ERK immuno-enhances T-cell activity, and that this effect likely translates to an inhibition of glioma cell growth. -- Highlights: ► Euplotes pheromone Er-1 increases the growth of human Jurkat T-cells. ► Er-1 increases the T-cell production of specific cytokines. ► Er-1 activates interleukin-2 receptor and extracellular signal-regulated kinases. ► The immuno-enhancing effect of Er-1 on Jurkat cells translates to an inhibition of human glioma cell growth.

  11. The protein pheromone Er-1 of the ciliate Euplotes raikovi stimulates human T-cell activity: Involvement of interleukin-2 system

    Energy Technology Data Exchange (ETDEWEB)

    Cervia, Davide, E-mail: d.cervia@unitus.it [Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Viterbo (Italy); Department of Biomedical and Clinical Sciences, “Luigi Sacco” University Hospital, University of Milan, Milano (Italy); Catalani, Elisabetta; Belardinelli, Maria Cristina [Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Viterbo (Italy); Perrotta, Cristiana [Department of Biomedical and Clinical Sciences, “Luigi Sacco” University Hospital, University of Milan, Milano (Italy); Picchietti, Simona [Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Viterbo (Italy); Alimenti, Claudio [Department of Environmental and Natural Sciences, University of Camerino, Camerino (Italy); Casini, Giovanni; Fausto, Anna Maria [Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Viterbo (Italy); Vallesi, Adriana [Department of Environmental and Natural Sciences, University of Camerino, Camerino (Italy)

    2013-02-01

    Water-soluble protein signals (pheromones) of the ciliate Euplotes have been supposed to be functional precursors of growth factors and cytokines that regulate cell–cell interaction in multi-cellular eukaryotes. This work provides evidence that native preparations of the Euplotes raikovi pheromone Er-1 (a helical protein of 40 amino acids) specifically increases viability, DNA synthesis, proliferation, and the production of interferon-γ, tumor necrosis factor-α, interleukin (IL)-1β, IL-2, and IL-13 in human Jurkat T-cells. Also, Er-1 significantly decreases the mRNA levels of the β and γ subunits of IL-2 receptor (IL-2R), while the mRNA levels of the α subunit appeared to be not affected. Jurkat T-cell treatments with Er-1 induced the down-regulation of the IL-2Rα subunit by a reversible and time-dependent endocytosis, and increased the levels of phosphorylation of the extracellular signal-regulated kinases (ERK). The cell-type specificity of these effects was supported by the finding that Er-1, although unable to directly influence the growth of human glioma U-373 cells, induced Jurkat cells to synthesize and release factors that, in turn, inhibited the U-373 cell proliferation. Overall, these findings imply that Er-1 coupling to IL-2R and ERK immuno-enhances T-cell activity, and that this effect likely translates to an inhibition of glioma cell growth. -- Highlights: ► Euplotes pheromone Er-1 increases the growth of human Jurkat T-cells. ► Er-1 increases the T-cell production of specific cytokines. ► Er-1 activates interleukin-2 receptor and extracellular signal-regulated kinases. ► The immuno-enhancing effect of Er-1 on Jurkat cells translates to an inhibition of human glioma cell growth.

  12. Acute effects of heavy metals on the expression of glutathione-related antioxidant genes in the marine ciliate Euplotes crassus

    International Nuclear Information System (INIS)

    Highlights: • Significant higher increases in the relative ROS and total GSH levels were observed after exposure to heavy metals. • Real-time PCR data showed expression levels of GPx and GR mRNA were sensitively modulated within 8 h of exposure to heavy metals. • E. crassus GPx and GR genes may be involved in cellular defense mechanisms against heavy metal-induced oxidative stress. • E. crassus GPx and GR genes will be useful as potential molecular markers for monitoring heavy metal contamination. - Abstract: Euplotes crassus, a single-celled eukaryote, is directly affected by environmental contaminants. Here, exponentially cultured E. crassus were exposed to cadmium, copper, lead, and zinc and then the reactive oxygen species (ROS) and total glutathione (GSH) levels were measured. Subsequently, the transcriptional modulation of glutathione peroxidase (GPx) and glutathione reductase (GR) were estimated by quantitative RT-PCR. After an 8-h exposure, significantly higher increases in the relative ROS and total GSH levels were observed in exposed group, compared to the controls. Real-time PCR data revealed that the expression levels of GPx and GR mRNA were sensitively modulated within 8 h of exposure to all heavy metals. These findings suggest that these genes may be involved in cellular defense mechanisms by modulating their gene expression against heavy metal-induced oxidative stress. Thus, they may be useful as potential molecular biomarkers to assess sediment environments for contaminants

  13. Influence of copper on Euplotes sp. and associated bacterial population

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    Guilherme Oliveira Andrade da Silva

    2014-05-01

    Full Text Available The influence of copper on the ciliate Euplotes sp. and associated bacteria isolated from sediment samples of Guanabara Bay were investigated in bioassays. This region is highly affected by heavy metals such as copper, from solid waste constantly dumped in the bay and other sources such as industrial effluents, antifouling paints, atmospheric deposition and urban drainage, and even today there are few data on the metal toxicity to the ecosystem of the Bay of Guanabara. Bioassays were conducted to estimate the LC50-24 h of copper, in order to determine the concentration of metal bearing 50% of the population mortality. The results indicated that the concentrations of 0.05 and 0.009 mg L-1 presented no toxicity to Euplotes sp. The associated bacteria are tolerant to copper concentrations used in bioassays, and suggest that they could be used as a potential agent in the bioremediation of areas affected by copper.

  14. Harmful Ciliates and Dominant Genus in Culture Ponds of Young Abalone

    Institute of Scientific and Technical Information of China (English)

    黄建荣; 徐润林; 廖家遗

    2004-01-01

    By using the methods of qualitative and quantitative analysis, the species composition and dominant genus of harmful, ciliates in young abalone culture ponds are studied. Totally 68 species of ciliates, belonging to 3 classes, 16 orders and 46 genus, are found. The dominant ciliate species are Aspidisca leptaspis, Vorticella sp. and Euplotes rariseta. During the young abalone cultivation, the numbers of young abalones increase first,and then show a trend of decreasing. The relationship between the density and composition of ciliates and the density of algae in the young abalone culture ponds is also discussed.

  15. Ciliate communities consistently associated with coral diseases

    Science.gov (United States)

    Sweet, M. J.; Séré, M. G.

    2016-07-01

    Incidences of coral disease are increasing. Most studies which focus on diseases in these organisms routinely assess variations in bacterial associates. However, other microorganism groups such as viruses, fungi and protozoa are only recently starting to receive attention. This study aimed at assessing the diversity of ciliates associated with coral diseases over a wide geographical range. Here we show that a wide variety of ciliates are associated with all nine coral diseases assessed. Many of these ciliates such as Trochilia petrani and Glauconema trihymene feed on the bacteria which are likely colonizing the bare skeleton exposed by the advancing disease lesion or the necrotic tissue itself. Others such as Pseudokeronopsis and Licnophora macfarlandi are common predators of other protozoans and will be attracted by the increase in other ciliate species to the lesion interface. However, a few ciliate species (namely Varistrombidium kielum, Philaster lucinda, Philaster guamense, a Euplotes sp., a Trachelotractus sp. and a Condylostoma sp.) appear to harbor symbiotic algae, potentially from the coral themselves, a result which may indicate that they play some role in the disease pathology at the very least. Although, from this study alone we are not able to discern what roles any of these ciliates play in disease causation, the consistent presence of such communities with disease lesion interfaces warrants further investigation.

  16. Large-scale mass spectrometry-based analysis of Euplotes octocarinatus supports the high frequency of +1 programmed ribosomal frameshift

    Science.gov (United States)

    Wang, Ruanlin; Zhang, Zhiyun; Du, Jun; Fu, Yuejun; Liang, Aihua

    2016-01-01

    Programmed ribosomal frameshifting (PRF) is commonly used to express many viral and some cellular genes. We conducted a genome-wide investigation of +1 PRF in ciliate Euplotes octocarinatus through genome and transcriptome sequencing and our results demonstrated that approximately 11.4% of genes require +1 PRF to produce complete gene products. While nucleic acid-based evidence for candidate genes with +1 PRF is strong, only very limited information is available at protein levels to date. In this study, E. octocarinatus was subjected to large-scale mass spectrometry-based analysis to verify the high frequency of +1 PRF and 226 +1 PRF gene products were identified. Based on the amino acid sequences of the peptides spanning the frameshift sites, typical frameshift motif AAA-UAR for +1 PRF in Euplotes was identified. Our data in this study provide very useful insight into the understanding of the molecular mechanism of +1 PRF. PMID:27597422

  17. Large-scale mass spectrometry-based analysis of Euplotes octocarinatus supports the high frequency of +1 programmed ribosomal frameshift.

    Science.gov (United States)

    Wang, Ruanlin; Zhang, Zhiyun; Du, Jun; Fu, Yuejun; Liang, Aihua

    2016-01-01

    Programmed ribosomal frameshifting (PRF) is commonly used to express many viral and some cellular genes. We conducted a genome-wide investigation of +1 PRF in ciliate Euplotes octocarinatus through genome and transcriptome sequencing and our results demonstrated that approximately 11.4% of genes require +1 PRF to produce complete gene products. While nucleic acid-based evidence for candidate genes with +1 PRF is strong, only very limited information is available at protein levels to date. In this study, E. octocarinatus was subjected to large-scale mass spectrometry-based analysis to verify the high frequency of +1 PRF and 226 +1 PRF gene products were identified. Based on the amino acid sequences of the peptides spanning the frameshift sites, typical frameshift motif AAA-UAR for +1 PRF in Euplotes was identified. Our data in this study provide very useful insight into the understanding of the molecular mechanism of +1 PRF. PMID:27597422

  18. Revisiting fifty years of research on pheromone signaling in ciliates.

    Science.gov (United States)

    Luporini, Pierangelo; Pedrini, Bill; Alimenti, Claudio; Vallesi, Adriana

    2016-08-01

    Among protists, pheromones have been identified in a great variety of algal species for their activity in driving gamete-gamete interactions for fertilization. Analogously in ciliates, pheromones have been identified for their activity in inducing the sexual phenomenon of conjugation. Although this identification was pioneered by Kimball more than fifty years ago, an effective isolation and chemical characterization of ciliate pheromones has remained confined to species of Blepharisma, Dileptus and Euplotes. In Euplotes species, in which the molecular structures have been determined, pheromones form species-specific families of structurally homologous helical, cysteine-rich, highly-stable proteins. Being structurally homologous, they can bind cells in competition with one another, raising interesting functional analogies with the families of growth factors and cytokines that regulate cell differentiation and development in higher organisms. In addition to inducing conjugation by binding cells in heterologous fashion, Euplotes pheromones act also as autocrine growth factors by binding to, and promoting the vegetative reproduction of the same cells from which they originate. This autocrine activity is most likely primary, providing a concrete example of how the original function of a molecule can be obscured during evolution by the acquisition of a new one. PMID:27345662

  19. Ecological functions of ciliated protozoa in marine ecosystem:effects on accumulation of ambient ammonia

    Institute of Scientific and Technical Information of China (English)

    Xu Henglong; Song Weibo; Zhu Mingzhuang; Wang Mei; Ma Honggang; Hu Xiaozhong

    2005-01-01

    Effects of ciliated protozoa, Euplotes vannus and Uronema marinum, on accumulation of ammonia in marine waters are detected using experimental ecological method, in order to reveal the contributions and functions of ciliates to the marine ecosystem. During experiments, the concentrations of ammonia-N, and the densities of ciliates and bacteria are measured. The results reveal that ciliates can change the procedure of ammonia accumulation by their grazing activity, and maintain ambient ammonium at low levels through interrupting the stationary phase of bacteria population growth and enhancing their growth and metabolism. The present work confirms that ciliates, as bacteria-predators, play positive roles in maintaining and improving water quality in marine ecosystems, especially in intensive mariculture biotopes.

  20. Bioactive Steroidal Glycosides from the Starfish Anasterias Minuta

    OpenAIRE

    Chludil, H.; M. S. Maier; A. M. Seldes

    2000-01-01

    Cytotoxic fractions obtained by purification of the ethanolic extract of Anasterias minuta contain sulfated hexasaccharide glycosides. These compounds show antifungal activity against Cladosporium cucumerinum.

  1. Bioactive Steroidal Glycosides from the Starfish Anasterias Minuta

    Directory of Open Access Journals (Sweden)

    H. Chludil

    2000-03-01

    Full Text Available Cytotoxic fractions obtained by purification of the ethanolic extract of Anasterias minuta contain sulfated hexasaccharide glycosides. These compounds show antifungal activity against Cladosporium cucumerinum.

  2. Unfolding Thermodynamics of Cysteine-Rich Proteins and Molecular Thermal-Adaptation of Marine Ciliates

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    Giorgia Cazzolli

    2013-11-01

    Full Text Available Euplotes nobilii and Euplotes raikovi are phylogenetically closely allied species of marine ciliates, living in polar and temperate waters, respectively. Their evolutional relation and the sharply different temperatures of their natural environments make them ideal organisms to investigate thermal-adaptation. We perform a comparative study of the thermal unfolding of disulfide-rich protein pheromones produced by these ciliates. Recent circular dichroism (CD measurements have shown that the two psychrophilic (E. nobilii and mesophilic (E. raikovi protein families are characterized by very different melting temperatures, despite their close structural homology. The enhanced thermal stability of the E. raikovi pheromones is realized notwithstanding the fact that these proteins form, as a rule, a smaller number of disulfide bonds. We perform Monte Carlo (MC simulations in a structure-based coarse-grained (CG model to show that the higher stability of the E. raikovi pheromones is due to the lower locality of the disulfide bonds, which yields a lower entropy increase in the unfolding process. Our study suggests that the higher stability of the mesophilic E. raikovi phermones is not mainly due to the presence of a strongly hydrophobic core, as it was proposed in the literature. In addition, we argue that the molecular adaptation of these ciliates may have occurred from cold to warm, and not from warm to cold. To provide a testable prediction, we identify a point-mutation of an E. nobilii pheromone that should lead to an unfolding temperature typical of that of E. raikovi pheromones.

  3. Involvement of Crawling and Attached Ciliates in the Aggregation of Particles in Wastewater Treatment Plants

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    Lucía Arregui

    2008-01-01

    Full Text Available The biological community in activated sludge wastewater plants is organized within this ecosystem as bioaggregates or flocs, in which the biotic component is embedded in a complex matrix comprised of extracellular polymeric substances mainly of microbial origin. The aim of this work is to study the role of different floc-associated ciliates commonly reported in wastewater treatment plants-crawling Euplotes and sessile Vorticella- in the formation of aggregates. Flocs, in experiments with ciliates and latex beads, showed more compactation and cohesion among particles than those in the absence of ciliates. Ciliates have been shown to contribute to floc formation through different mechanisms such as the active secretion of polymeric substances (extrusomes, their biological activities (movement and feeding strategies, or the cysts formation capacity of some species. Staining with lectins coupled to fluorescein showed that carbohydrate of the matrix contained glucose, manose, N-acetyl-glucosamine and galactose. Protein fraction revealed over the latex beads surfaces could probably be of bacterial origin, but nucleic acids represented an important fraction of the extracellular polymeric substances of ciliate origin.

  4. Antitussive, expectorant activity of Marsilea minuta L., an Indian vegetable

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    Raja Chakraborty

    2013-01-01

    Full Text Available Marsilea minuta L., an aquatic or sub-aquatic fern used as a vegetable, has wide applications in traditional/folk medicine in India and Bangladesh. In our study, we evaluated the antitussive, expectorant activity of M. minuta crude extracts. The antitussive activity of M. minuta methanol, ethyl acetate, and petroleum ether extracts was evaluated using ammonia and sulfur dioxide induced mice coughing. The expectorant activity was evaluated by the volume of phenol red in mice′s tracheas. Extracts significantly increased mice′s cough latent period and inhibited the frequency of cough induced by ammonia and sulfur dioxide, and improved tracheal phenol red output in expectorant evaluation. Methanol extract produced the highest activity in all tested models. Methanol extract at 500 mg/kg showed 59.5% and 55.8% inhibition in the number of coughing induced by ammonium liquor and SO 2 , respectively, while it showed 89.3% increase in phenol red secretion at the same dose, which showed superior activity compared to other extracts. The present study provided evidence for M. minuta to be used as an antitussive and expectorant in Indian folk medicine.

  5. Antitussive, expectorant activity of Marsilea minuta L., an Indian vegetable

    Science.gov (United States)

    Chakraborty, Raja; De, Biplab; Devanna, N.; Sen, Saikat

    2013-01-01

    Marsilea minuta L., an aquatic or sub-aquatic fern used as a vegetable, has wide applications in traditional/folk medicine in India and Bangladesh. In our study, we evaluated the antitussive, expectorant activity of M. minuta crude extracts. The antitussive activity of M. minuta methanol, ethyl acetate, and petroleum ether extracts was evaluated using ammonia and sulfur dioxide induced mice coughing. The expectorant activity was evaluated by the volume of phenol red in mice's tracheas. Extracts significantly increased mice's cough latent period and inhibited the frequency of cough induced by ammonia and sulfur dioxide, and improved tracheal phenol red output in expectorant evaluation. Methanol extract produced the highest activity in all tested models. Methanol extract at 500 mg/kg showed 59.5% and 55.8% inhibition in the number of coughing induced by ammonium liquor and SO2, respectively, while it showed 89.3% increase in phenol red secretion at the same dose, which showed superior activity compared to other extracts. The present study provided evidence for M. minuta to be used as an antitussive and expectorant in Indian folk medicine. PMID:23662283

  6. Acylated flavonol glycosides from Tagetes minuta with antibacterial activity

    Directory of Open Access Journals (Sweden)

    Irum eShahzadi

    2015-09-01

    Full Text Available Wild marigold (Tagetes minuta, a flowering plant of the family Asteraceae contains compounds of pharmaceutical and nutritional importance especially essential oils and flavonols. Identification, characterization of flavonols and determination of their antibacterial activity were major objectives of the current study. The isolation and purification of flavonols was accomplished using chromatographic techniques while structural elucidation was completed by LC-MS and NMR spectroscopy. The extracts and purified compounds were tested against various bacterial strains for antibacterial activity. A total of nineteen flavonols were isolated from this species. Of these, seventeen were of butanol and two of ethyl acetate extracts. Based on the concentration and purity, eight potential flavonols were selected and structurally elucidated. Four flavonols, 6-hydroxyquercetin 7-O-β-(6''-galloylglucopyranoside (2, 6-hydroxykaempferol 7-O-β-glucopyranoside (5, 6-hydroxykaempferol 7-O-β-(6''-galloylglucopyranoside (7, 6-hydroxyquercetin 7-O-β-(6''-caffeoylglucopyranoside (9, were identified for the first time from T. minuta. Butanol and ethyl acetate extracts of flowers and seeds showed significant antibacterial activity against Micrococcus leteus, Staphylococcus aureus, Bacillus subtilis and Pseudomonas piket. Among the isolated flavonols only 1, 2 and 18 were found to possess significant antibacterial activity against M. luteus. The extracts and purified flavonols from T. minuta can be potential candidates for antibacterial drug discovery and support to ethnopharmacological use.

  7. Anti-oxidative and anti-inflammatory effects of Tagetes minuta essential oil in activated macrophages

    Institute of Scientific and Technical Information of China (English)

    Parastoo Karimian; Gholamreza Kavoosi; Zahra Amirghofran

    2014-01-01

    Objective:To investigate antioxidant and anti-inflammatory effects of Tagetes minuta (T. minuta) essential oil. Methods:In the present study T. minuta essential oil was obtained from leaves of T. minuta via hydro-distillation and then was analyzed by gas chromatography-mass spectrometry. The anti-oxidant capacity of T. minuta essential oil was examined by measuring reactive oxygen, reactive nitrogen species and hydrogen peroxide scavenging. The anti-inflammatory activity of T. minuta essential oil was determined through measuring NADH oxidase, inducible nitric oxide synthase and TNF-αmRNA expression in lipopolysacharide-stimulated murine macrophages using real-time PCR. Results:Gas chromatography-mass spectrometry analysis indicated that the main components in the T. minuta essential oil were dihydrotagetone (33.86%), E-ocimene (19.92%), tagetone (16.15%), cis-β-ocimene (7.94%), Z-ocimene (5.27%), limonene (3.1%) and epoxyocimene (2.03%). The T. minuta essential oil had the ability to scavenge all reactive oxygen/reactive nitrogen species radicals with IC50 12-15 μg/mL, which indicated a potent radical scavenging activity. In addition, T. minuta essential oil significantly reduced NADH oxidase, inducible nitric oxide synthaseand TNF-αmRNA expression in the cells at concentrations of 50 μg/mL, indicating a capacity of this product to potentially modulate/diminish immune responses. Conclusions:T. minuta essential oil has radical scavenging and anti-inflammatory activities and could potentially be used as a safe effective source of natural anti-oxidants in therapy against oxidative damage and stress associated with some inflammatory conditions.

  8. Spatiotemporal variation in community structure of marine benthic ciliates in the Yellow Sea during and after macroalgal and giant jellyfish blooms

    Science.gov (United States)

    Zhou, Bailing; Xu, Kuidong

    2016-07-01

    The annual bloom of the green macroalgal Ulva prolifera from May through July since 2008 and another of giant jellyfish Nemopilema nomurai from June through September have been frequent events in the Yellow Sea. However, the patterns of benthic ciliate communities during and after the blooms are still not known. In combination with analyses of benthic environmental factors, we investigated the distribution and community composition of benthic ciliates in the Yellow Sea in July and November 2011. In July, ciliates had high standing crops and diversity in the northern Yellow Sea, and in the inshore area off the southern Shandong Peninsula, where large numbers of green macroalgae accumulated. In November, the abundance, biomass and diversity of ciliates were high in the sea areas off the Shandong Peninsula and Changjiang estuary, where a large quantity of jellyfish occurred in August. Neither the abundance nor the biomass had significant difference between seasons, or between different compartments of the Yellow Sea. The species number, and both Margalef and Shannon-Wiener indices of ciliates were all significantly higher in November than in July. In both seasons, prostomateans and karyorelicteans consistently constituted the first and second most important ciliate groups in biomass; and carnivorous ciliates constituted the primary feeding type in terms of biomass as well as species richness, followed by bacterivores, algivores and omnivores. Compared with that in June 2007 when no macroalgae occurred, the percentage of small-sized bacterivores (e.g. Metacystis spp., Euplotes spp. and scuticociliates) increased in July 2011. The proportion of carnivorous ciliates increased in November, and this increased dominance of carnivorous ciliates may be a response to the increase in predominance of heterotrophic nanoflagellates, which might in turn be ascribed to an effect of green macroalgal and giant jellyfish blooms in the Yellow Sea.

  9. Identification of Intergeneric Hybrid Plants Between Oryza sativa and O. minuta via GISH and RAPD

    Institute of Scientific and Technical Information of China (English)

    YU Shun-wu; CHEN Bao-tang; TAO Ai-lin; ZHANG Duan-pin

    2003-01-01

    To transfer desirable resistance traits from O. minuta to O. sativa, intergeneric hybrid plants between O. sativa (AA, 2n=2X=24) and O. minuta (BBCC, 2n=4X=48) were produced by embryo rescue after sexual cross. Morphological observation and chromosome counts indicated their hybrid status (ABC, 2n =3X=36). Genomic in situ hybridization (GISH) was further applied to confirm the parentage of the chromosomes of F1 hybrids. Chromosomes of O. minuta and O. sativa were distinguishable in the hybrids in different fluorescence colors. GISH indicated that A and BC chromosomes were not randomly assembled in a cell.RAPD profiles unequivocally revealed their hybrids with double parent patterns. The results of blast tests showed that the hybrids had obtained disease resistance from O. minuta, and had a level of susceptibility between the parents.

  10. Reprodução de Pseudis minuta (Anura, Hylidae) no sul do Brasil

    OpenAIRE

    Janaine Melchiors; Marcos Di-Bernardo; Glaucia Maria Funk Pontes; Roberto Baptista de Oliveira; Mirco Solé; Axel Kwet

    2004-01-01

    Reproduction of Pseudis minuta (Anura, Hylidae) in southern Brazil.This study was based on individuals of Pseudis minuta captured or observed in the municipality of Candiota, Campanha region of the state of Rio Grande do Sul, southern Brazil. Sampling occurred along ten non-consecutive months in 2000, 2001 and 2002. The reproductive phases were characterized based on the gonadal development stage of39 males and 50 females, and on the observation, in nature, of the seasonal distribution of cal...

  11. Binding of Euplotes octocarinatus centrin with target peptide melittin

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Interactions between model target peptide melittin (ME) and Euplotes octocarinatus centrin (EoCen) were investigated by fluorescence spectra, circular dichroism (CD) spectra and native polyacrylamide gel electrophoresis (PAGE). In 0.1 mol/L N-2-hydroxyethylpiperazine-N-2-ethanesulfonic acid (Hepes) and 150 mmol/L NaCl at pH 7.4, EoCen and isolated short C-terminal domain of EoCen (SC-EoCen) form 1:1 peptide:protein complexes. However, no detectable signal changes can be observed while isolated N-terminal domain of EoCen (N-EoCen) or isolated long C-terminal domain of EoCen (LC-EoCen) was added into solution of ME. The interaction between EoCen and ME is specified exclusively for the short C-terminal domain of EoCen. On the basis of fluorescence titration curves, the conditional binding constants of ME with EoCen and SC-EoCen were calculated to be logKME-EoCen = 6.81±0.33 and logKME-SC-EoCen = 6.51±0.45, respectively.

  12. Characterization of melittin binding to Euplotes octocarinatus centrin

    Science.gov (United States)

    Zhao, Yaqin; Feng, Jiuying; Wang, Zhijun; Liang, Aihua; Yang, Binsheng

    2008-09-01

    In the presence of 1.0 mM Ca 2+, the interaction between Euplotes octocarinatus centrin (EoCen) and melittin (ME) was studied by means of fluorescence spectra. In 0.1 M N-2-hydroxyethylpiperazine- N-2-ethanesulfonic acid (Hepes) and 150 mM NaCl at pH 7.4, fluorescence peak of ME was observed at about 353 nm indicating that micro-environment of Tryptophan (Trp) residue in ME was hydrophilic. With the addition of 3.2 × 10 -4 M calcium saturated EoCen (holoEoCen), the peak of ME was blue-shifted to 339 nm, which may be resulted from micro-environmental changes of the peptide. At the same time, fluorescence emission of ME was increased significantly suggesting that new complex of ME-holoEoCen was formed under the experimental conditions. Based on the fluorescence titration curves, the 1:1 stoichiometric ratio of holoEoCen to ME was confirmed. In addition, the conditional binding constant of holoEoCen with ME was calculated to be log KME-holoEoCen = 6.59 ± 0.14.

  13. Development and Identification of Introgression Lines from Cross of Oryza sativa and Oryza minuta

    Institute of Scientific and Technical Information of China (English)

    GUO Si-bin; WEI Yu; LI Xiao-qiong; LIU Kai-qiang; HUANG Feng-kuan; CHEN Cai-hong; GAO Guo-qing

    2013-01-01

    Introgression line population is effectively used in mapping quantitative trait loci (QTLs),identifying favorable genes,discovering hidden genetic variation,evaluating the action or interaction of QTLs in multiple conditions and providing the favorable experimental materials for plant breeding and genetic research.In this study,an advanced backcross and consecutive selfing strategy was used to develop introgression lines (ILs),which derived from an accession of Oryza minuta (accession No.101133) with BBCC genome,as the donor,and an elite indica cultivar IR24 (O.sativa),as the recipient.Introgression segments from O.minuta were screened using 164 polymorphic simple sequence repeat (SSR) markers in the genome of each IL.Introgressed segments carried by 131 ILs covered the whole O.sativa genome.The average number of homozygous O.minuta segments per introgression line was about 9.99.The average length of introgressed segments was approximate 14.78 cM,and about 79.64%of these segments had sizes less than 20 cM.In the genome of each introgression line,the O.minuta chromosomal segments harbored chromosomal fragments of O.sativa ranging from 1.15% to 27.6%,with an overall average of 8.57%.At each locus,the ratio of substitution of O.minuta alleles had a range of 1.5%-25.2%,with an average of 8.3% Based on the evaluation of the phenotype of these ILs,a wide range of alterations in morphological and yield-related traits were found.After inoculation,ILs 41,11 and 7 showed high resistance to bacterial blight,brown planthopper and whitebacked planthopper,respectively.These O.minuta-O.sativa ILs will serve as genetic materials for identifying and using favorable genes from O.minuta.

  14. Distribution and Abundance of Interstitial Ciliates in Southampton Water in Relation to Physicochemical Conditions, Metal Pollution and the Availability of Food Organisms

    Science.gov (United States)

    Al-Rasheid, K. A. S.; Sleigh, M. A.

    1995-07-01

    Sediment samples were collected at low tide from eight sandy and muddy shores around Southampton Water on one occasion in July and one occasion in September. The temperature and pH of the sediments were measured at the time of collection, the water content of the sediments was determined and samples subjected to granulometric analysis. The population densities of bacteria and microflagellates were determined and the ciliates in sub-samples were identified to genus level and enumerated. The concentrations of cadmium, copper, lead, mercury and nickel in the interstitial water and in the dried sediments were measured by the dithizone and atomic absorption methods, respectively. These metal concentrations were compared with literature values for other British estuaries. Ciliates belonging to 23 genera were found in the sediments, the diversity of ciliates varying widely between stations. Bacterial numbers (mean ˜5×10 8 cm -3) at the various stations correlate with the surface area of the sediment particles and also correlate weakly with flagellate numbers (mean ˜2×10 4 cm -3). Total ciliate numbers (mean ˜1×10 3 cm -3) correlated quite strongly with flagellate numbers, but not with bacterial numbers. Euplotes, Strombidiumand Uronemawere common at all stations and generally dominated; Didinium, Mesodinium pulexand Pleuronemawere also found at all stations, and the latter two were often numerous; Uronychiawas found at seven stations. The distributions of Acinetopsis, Blepharisma, Lacrymaria, M. pulex, Paramecium, Spirostomum, Strombidiumand Vorticellashowed similar correlations to one another, and tended to favour sites nearer to sources of freshwater; these ciliates also showed a correlation with pH, river waters locally being alkaline. None of the ciliates showed correlations with any physical characteristics of the sediments. There were no negative correlations of ciliate distributions with metal pollutants. The levels of metal pollutants found in water drained

  15. Growth of Little Stint Calidris minuta chicks on the Taimyr Peninsula, Siberia

    NARCIS (Netherlands)

    Schekkerman, H; Nehls, G; Hotker, H; Tomkovich, PS; Kania, W; Chylarecki, P; Soloviev, M; Van Roomen, M

    1998-01-01

    Growth of mass and linear body dimensions (bill, tarsus and wing length) was studied in the Little Stint Calidris minuta at several locations on the Taimyr Peninsula, Siberia (73 degrees-76 degrees N) in 1983-94. Little Stints fledged at near-adult body mass, at 15 days of age. Growth followed an S-

  16. The Ciliate Colpoda: "Instant" Protozoan

    Science.gov (United States)

    Smith, Anne Muller; Giese, Arthur C.

    1973-01-01

    Describes the characteristics of Colpoda, a ciliated protozoan which is able to survive in a dry, encysted state for long periods of time. Outlines the procedures for culturing the organism and producing cyst preparations, and recommends its use in the high school biology laboratory. (JR)

  17. Mallard duck (Anas platyrhynchos)-mediated dispersal of Lemnaceae: a contributing factor in the spread of invasive Lemna minuta?

    Science.gov (United States)

    Coughlan, N E; Kelly, T C; Jansen, M A K

    2015-01-01

    Our ability to predict and manage the spread of alien, invasive plants is limited by a lack of understanding of dispersal potential. Invasive Lemna minuta has spread within a few decennia throughout Europe. However, the mechanism by which the species continues to spread remains a matter of speculation. In this study, hypothesised epizoochorous transport of L. minuta propagules by mallard ducks was investigated. Landolt (Biosystematic investigations in the family of duckweeds (Lemnaceae) (Vol. 2), The family of Lemnaceae - a monographic study (Vol. 1), 1986, Veröffentlichungen des Geobotanischen Institutes Der Eidg. Techniasche Hochschule, Stiftung Rübel, Zürich, Switzerland) referred to desiccation as the key limitation of the "colonization capability" of Lemnaceae. Therefore, we analysed retention of viability in L. minuta kept outside the liquid growth medium. Our data show prolonged viability of L. minuta fronds inserted between the feathers of a mallard duck. Consistently, the relative humidity between feathers ranged between 65% and 90%. Taking together evidence of entanglement and retention of L. minuta between the feathers of live ducks, with retention of viability, we consider it likely that mallards contribute to L. minuta dispersal. These data have implications for the management strategy of this invasive species.

  18. : a database of ciliate genome rearrangements.

    Science.gov (United States)

    Burns, Jonathan; Kukushkin, Denys; Lindblad, Kelsi; Chen, Xiao; Jonoska, Nataša; Landweber, Laura F

    2016-01-01

    Ciliated protists exhibit nuclear dimorphism through the presence of somatic macronuclei (MAC) and germline micronuclei (MIC). In some ciliates, DNA from precursor segments in the MIC genome rearranges to form transcriptionally active genes in the mature MAC genome, making these ciliates model organisms to study the process of somatic genome rearrangement. Similar broad scale, somatic rearrangement events occur in many eukaryotic cells and tumors. The (http://oxytricha.princeton.edu/mds_ies_db) is a database of genome recombination and rearrangement annotations, and it provides tools for visualization and comparative analysis of precursor and product genomes. The database currently contains annotations for two completely sequenced ciliate genomes: Oxytricha trifallax and Tetrahymena thermophila.

  19. Interaction of Two Classes of Release Factors from Euplotes octocarinatus%八肋游仆虫两类释放因子的相互作用

    Institute of Scientific and Technical Information of China (English)

    柴宝峰; 宋莉; 付月君; 王伟; 梁爱华

    2004-01-01

    Translation termination on the ribosome is an essential process for cell viability. This process is maintained by two classes of peptide release factors (RF1/RF2, RF3 and eRF1 ,eRF3 in prokaryotes and eukaryotes, respectively). In protozoa ciliates Euplotes octocarinatus,an unicellular eukaryotes,universal stop codon UGA is reassigned for cysteine suggesting the specificity of evolution of translation termination system. We cloned two classes of release factors from Euplotes octocarinatus previously. In this paper,three in-frame stop codons UGA in Eo-eRF3 gene were mutated mediated by PCR site directed mutagenesis method. The interaction between eRF1 and eRF3 from E. octocarinatus was assayed in vivo using Yeast Two-hybrid System,which has an advantage of highly sensitivity. The results showed that the eRF1 · eRF3 complex was formed in living cells to function in the process of translation termination, differing from that in prokaryotes in which RF1/RF2 and RF3 function separately. The evolution of translation termination of life-form was analyzed using phylogenetic tree of amino acids sequences of RFs ( 32 (e) RF1 s and 24 (e) RF3 s) obtained from GenBank. Two classes of RFs are useful information in analysis of evolution of life-form and further elucidation of mechanism of translation termination of protein synthesis on ribosome.%从八肋游仆虫中克隆到两类释放因子基因Eo-eRF1和Eo-eRF3.在Eo-eRF3基因的阅读框中有3个通用的终止密码子UGA,在此编码半胱氨酸.为了研究两类释放因子的相互作用,用PCR的方法对3个位点进行了定点突变,将UGA突变为通用的编码半胱氨酸的密码子UGU.突变结果经测序确认后,在大肠杆菌中获得全长Eo-eRF3的正确表达.在此基础上,构建酵母双杂交重组质粒,用该系统检测了游仆虫两类释放因子的相互作用.结果显示,两类释放因子在生物体内形成复合体,从而在较原始的真核生物中,证实了两类释放因子的相互作用关系.

  20. Minutosides A and B, antifungal sulfated steroid xylosides from the patagonian starfish Anasterias minuta.

    Science.gov (United States)

    Chludil, Hugo D; Maier, Marta S

    2005-08-01

    Two new sulfated polyhydroxylated steroidal xylosides, minutosides A (1) and B (2), together with the known pycnopodioside B (3), have been isolated from the brine shrimp active fraction of the ethanolic extract of the starfish Anasterias minuta. The structures have been elucidated by extensive 1D and 2D NMR as well as FABMS analysis and chemical methods. Compound 2 is the first example of a polyhydroxylated steroidal xyloside containing an amide function in the aglycon side chain. The three xylosides exhibited antifungal activity against Cladosporium cucumerinum and Aspergillus flavus. PMID:16124779

  1. Ciliates Expel Environmental Legionella-Laden Pellets To Stockpile Food

    OpenAIRE

    Hojo, Fuhito; Sato, Daisuke; Matsuo, Junji; Miyake, Masaki; Nakamura, Shinji; Kunichika, Miyuki; Hayashi, Yasuhiro; Yoshida, Mitsutaka; Takahashi, Kaori; Takemura, Hiromu; Kamiya, Shigeru; Yamaguchi, Hiroyuki

    2012-01-01

    When Tetrahymena ciliates are cultured with Legionella pneumophila, the ciliates expel bacteria packaged in free spherical pellets. Why the ciliates expel these pellets remains unclear. Hence, we determined the optimal conditions for pellet expulsion and assessed whether pellet expulsion contributes to the maintenance of growth and the survival of ciliates. When incubated with environmental L. pneumophila, the ciliates expelled the pellets maximally at 2 days after infection. Heat-killed bact...

  2. Reprodução de Pseudis minuta (Anura, Hylidae no sul do Brasil

    Directory of Open Access Journals (Sweden)

    Janaine Melchiors

    2004-09-01

    Full Text Available Reproduction of Pseudis minuta (Anura, Hylidae in southern Brazil.This study was based on individuals of Pseudis minuta captured or observed in the municipality of Candiota, Campanha region of the state of Rio Grande do Sul, southern Brazil. Sampling occurred along ten non-consecutive months in 2000, 2001 and 2002. The reproductive phases were characterized based on the gonadal development stage of39 males and 50 females, and on the observation, in nature, of the seasonal distribution of calling males, occurrence of amplectant pairs, and presence of larvae, juveniles and adults. Calls were recorded from August to April, amplectant pairs from October to February (except January, tadpoles from October to March (except February, and juveniles in all the sampled months (except January. Reproductive activity was not observed in late fall and early winter, even though females with post-vitellogenic oocytes and males with spermatozoa in the seminiferous tubules were recorded in allthe seasons. Mature females were statistically larger and heavier than mature males.The smallest female with post-vitellogenic oocytes had 32.0 mm of snout-vent length,and the smallest male with spermatozoa in its seminiferous tubules had 20.6 mm. The number of post-vitellogenic oocytes was directly proportional to the mass and to the snout-vent length of females, and the length of testis was directly proportional to the snout-vent length and to the mass of males.

  3. The Cutaneous Ciliated Cyst in Young Male: The Possibility of Ciliated Cutaneous Eccrine Cyst

    Science.gov (United States)

    Kim, Youngjoon; Kim, Hyunjung

    2015-01-01

    Cutaneous ciliated cyst was described as a painless cyst occurring on the lower limbs of women between the ages of 15 and 30 years. The cysts are typically lined by ciliated cuboidal to columnar epithelium with pseudostratified areas and focal squamous metaplasia is occasionally present. Immunohistochemical studies have demonstrated that the cysts are PR and ER positive, similar to the epithelia of the fallopian tubes. However, outliers of cutaneous ciliated cysts, including those in male patients and in unexpected locations such as the scalp, finger, and scapular area, have been reported. Thus, some hypotheses have been proposed including the Mullerian heterotopias, ciliated metaplasia of eccrine sweat glands, and embryonic remnants of the cloacal membrane. We report a rare case of cutaneous ciliated cyst on the left shoulder of a 7-year-old boy and this is the eighth case of cutaneous ciliated cyst in male patients. Moreover, through reviewing the articles, we try to propose the classification of the cutaneous ciliated cysts into the cutaneous Mullerian cysts and the ciliated cutaneous eccrine cysts. PMID:26491452

  4. The Cutaneous Ciliated Cyst in Young Male: The Possibility of Ciliated Cutaneous Eccrine Cyst

    Directory of Open Access Journals (Sweden)

    Youngjoon Kim

    2015-01-01

    Full Text Available Cutaneous ciliated cyst was described as a painless cyst occurring on the lower limbs of women between the ages of 15 and 30 years. The cysts are typically lined by ciliated cuboidal to columnar epithelium with pseudostratified areas and focal squamous metaplasia is occasionally present. Immunohistochemical studies have demonstrated that the cysts are PR and ER positive, similar to the epithelia of the fallopian tubes. However, outliers of cutaneous ciliated cysts, including those in male patients and in unexpected locations such as the scalp, finger, and scapular area, have been reported. Thus, some hypotheses have been proposed including the Mullerian heterotopias, ciliated metaplasia of eccrine sweat glands, and embryonic remnants of the cloacal membrane. We report a rare case of cutaneous ciliated cyst on the left shoulder of a 7-year-old boy and this is the eighth case of cutaneous ciliated cyst in male patients. Moreover, through reviewing the articles, we try to propose the classification of the cutaneous ciliated cysts into the cutaneous Mullerian cysts and the ciliated cutaneous eccrine cysts.

  5. Inter-annual ciliate distribution variation within the late stratification oxycline in a monomictic lake, Lake Alchichica (Mexico

    Directory of Open Access Journals (Sweden)

    Ximena Sánchez Medina

    2016-03-01

    Full Text Available noxia, and ciliates might play a very important role in the plankton community budget there. We analysed changes in the composition and biomass of the ciliate assemblage and other microbial loop components throughout the oxycline just at the end of stratification in a warm-monomictic lake, Lake Alchichica, Mexico (four samplings: 2006-2008, 2010; the results were compared with those obtained from another lake from the region, La Preciosa, sampled in 2010. Bacteria, autotrophic picoplankton (APP and flagellates were analysed using epifluorescence microscopy. Ciliates were evaluated either in DAPI stained samples (looking for pigmented organelles and/or ingested phototrophs or in quantitative protargol stain (QPS permanent preparations, where they were identified at the genus or species level. The end of the stratification period in Lake Alchichica was characterized by almost uniform heterotrophic picoplankton (HPP numbers (106 cells mL-1 throughout the water column. Meanwhile, APP showed epilimnetic and/or metalimnetic maxima of 105 cells mL-1 followed by an order of magnitude drop in the hypolimnion. A very important peak (105 cells mL-1 of the autotrophic or mixotrophic flagellate Pyramimonas sp. was observed repeatedly above and within the oxycline of Lake Alchichica. Ciliate biomass maxima were found around the oxycline and in the above-bottom layer. The top of the oxycline was dominated by Euplotes spp. and Spirostomum teres fine- to coarse-filter feeders (feeding upon APP, nanodiatoms and algae. Raptorial haptorids (in particular, Phialina sp. were the second most important group, generally occupying the layer below euplotids, followed by Holophrya and Prorodon facultative anaerobic prostomes. Sometimes, strictly anaerobic Caenomorpha sp. was found to be important in the anoxic hypolimnion. Minute picoplankton feeding species (both APP and heterotrophic bacteria feeders were important throughout the water column: in the epilimnion

  6. Molecular Cytogenetic Analysis of Spontaneous Interspecific Hybrid Between Oryza sativa and Oryza minuta

    Institute of Scientific and Technical Information of China (English)

    YI Chuan-deng; CHENG Xu; WANG Bei-bei; LIANG Guo-hua; GONG Zhi-yun; TANG Shu-zhu; GU Ming-hong

    2008-01-01

    Genomic in situ hybridization (GISH) is a powerful tool to characterize parental chromosomes in interspecific hybrids, including the behaviour of autosynapsis and chromosome paidng. It was used to distinguish the chromosomes of Oryza sativa from wild species in a spontaneous interspecific hybdd and to investigate the chromosome pairing at metaphase I in meiosis of the hybdd in this study. The hybrid was a triploid with 36 chromosomes according to the chromosome nurnber investigated in mitosis of root tips. During metaphase I of meiosis in the hybrid, less chromosome pairing was observed and most of the chromosomes existed as univalent. Based on GISH and FISH (Fluorescent in situ hybridization) analyses, the chromosomes of the hybrid were composed of genomes A, B and C. Thus, it was believed that the hybrid was the result of natural hybridization between cultivated rice and wild species O. minuta which was planted in experimental fields.

  7. An approach to measure ciliate grazing on living heterotrophic nanoflagellates

    DEFF Research Database (Denmark)

    Christoffersen, K.; González, J. M.

    2003-01-01

    persisted for several hours. Fluorescently labelled living flagellates (FLLF) were added into enriched natural assemblages of marine oligotrich ciliates and uptake of FLLF was monitored over time. Oligotrich ciliates did not incorporate fluorescent-labelled macromolecules but a linear FLLF uptake over time...... a direct approach to measure ciliate grazing specifically on living heterotrophic nanoflagellates....

  8. A TEM study on pre—excystment cellular structures of Euplotes encysticus

    Institute of Scientific and Technical Information of China (English)

    GUTUKANG; JUNMEIXU

    1995-01-01

    Right before the excystment of an Euplotes encysticus sawtooth-like folds appeared among the pellicle plasmalemma,the inner and outer alveolar membranes were still sticking together,and were not distinguishable.Microtubular layers already formed at the sites beneath the dorsal cortical pellicle corresponding to vegetative cells,but they still proceed to be organized on the ventral structures.Cristae,highly-tangled with tubular-type structures,appeared on the mitochondria,and were morphologically similar to that of vegetative cells.In the cortical ciliatures,such as ciliary shafts,kinetosomes,surrounding fibrillar cirral baskets,and attached structures of ciliatures,etc.,they are different from those in resting cysts which are degenerated or lost.All the ciliature microtubules of ciliary shafts are of the 9+2 pattern,but the microtubule-like structure aggregates at tripletmicrotubule centers of many kinetosmes,are still under various stages of differentiation.Microtubules beneath the kinetosomal rows are of a developmentally elongated stage;crowded chromatins of various shapes and sizes are found in macronucleus,but there are no nuclear pores (formed by nuclear membrane as in resting cysts) on the nuclear membrane where these chromatins attached.

  9. Imaging features of ciliated hepatic foregut cyst

    Institute of Scientific and Technical Information of China (English)

    Song-Hua Fang; Dan-Jun Dong; Shi-Zheng Zhang

    2005-01-01

    Ciliated hepatic foregut cyst (CHFC) is a very rare cystic lesion of the liver that is histologically similar to bronchogenic cyst. We report one case of CHFC that was hard to distinguish from solid-cystic neoplasm in imaging features. Magnetic resonance imaging was helpful in differentiating these cysts from other lesions.

  10. DNA Polymorphism Among Yewei B, V20B, and Oryza minuta J. S. Presl. ex C. B. Presl.

    Institute of Scientific and Technical Information of China (English)

    Bing-Ran ZHAO; Quan-Hua XING; Hong-Ai XIA; He-Hua YANG; De-Min JIN; Xia LIU; Song-Wen WANG; Bin WANG; Long-Ping YUAN

    2005-01-01

    The new cytoplasmic male sterile (CMS) line YeweiA and its maintainer line Yewei B, with better agronomic characteristics, have been developed from a mutant of V20B (a rice maintainer line) through transformation of genomic DNA of wild rice (Oryza minuta J. S. Presl. ex C. B. Presl.). Analysis of molecular markers, DNA sequences, and Southern blot revealed that high DNA polymorphism exists between the mutant and its receptor, indicating that the special DNA fragment from O. minuta may be integrated into the genome of Yewei B. Therefore, transformation of genomic DNA from distant relatives to the plant of a target receptor may open an avenue for creating a new rice germplasm.

  11. Reevaluation of cortical developmental patterns in Euplotes (s. l.), including a morphogenetic redescription of E. charon (Protozoa, Ciliophora, Euplotida)

    Science.gov (United States)

    Shao, Chen; Ma, Honggang; Gao, Shan; Khaled, Al-Rasheid A.; Song, Weibo

    2010-05-01

    We documented the pattern of cell development in Euplotes charon. The ontogenesis of this species was similar to many of its congeners, except for the formation of the caudal cirri. In E. Charon, a caudal cirrus is formed posterior to each of the rightmost two or three dorsal kinety anlage in the proter, and the second rightmost dorsal kinety in the opisthe. In addition, two caudal cirri are formed posterior to the rightmost dorsal kinety in the opisthe. This pattern of development represents a completely new type. Based on our evaluation, and in comparison with previous studies, we also conclude that the pattern of cell development is variable among species in the Euplotes genera. The variation is particularly evident during the formation of frontoventral and caudal cirri. Based on the segmentation pattern of frontal-midventral transverse cirral anlagen, cirri reduction, and migration of frontoventral cirri, we identified five types: the affinis-type, the eurystomus-type, the charon-type, the raikovi-type and orientalis-type. Euplotes (s. l.) can also be divided into three types based on the formation of caudal cirri: focardii-type, vannus-type and charon-type. Indeed, we conclude that the number (one or two) of marginal cirri should be given as much consideration as the genetic separation. Given this, we reassessed the validity of using genetic separation to classify the group. Generally, the morphogenetic data disagreed with the molecular data (SSrRNA gene sequences). Given these discrepancies, it is too early to draw conclusions on the systematic arrangement of this species-rich taxon.

  12. First report of black-foot disease, caused by Cylindrocarpon destructans, on ornamental marigold (Tagetes minuta in Iran

    Directory of Open Access Journals (Sweden)

    Jamali Samad

    2014-07-01

    Full Text Available The ornamental Tagetes minuta is a herbaceous plant of the Asteraceae family. T. minuta, a species native to southern South America, is used as a condiment, as a refreshing beverage, and for medicinal purposes. In 2011, disease symptoms of yellowing, root and foot rot, drying of leaves, and plant death were observed in an ornamental marigold (T. minuta greenhouse in Fars province. The infected plants were collected and transferred to a laboratory. Samples were washed, cut into small pieces, surface disinfested with a 0.5% NaClO solution, and cultured on Potato Dextrose Agar (PDA acidified to pH 4.5 with 0.5% lactic acid. Based on morphological characters, the causal agent was identified as Cylindrocarpon destructans. To confirm morphological identification, DNA was extracted from isolates using a genomic DNA purification Kit. The region of internal transcribed spacers 1, 2, and 5.8S genes of rDNA were amplified using the ITS4 and ITS1 universal primer set. Fragments of 600 bp were recovered from PCR, purified, sequenced, edited, and deposited in GenBank. The isolates had a 100% identity with all the compared C. destructans sequences. The pathogenicity tests were done with a suspension of 1 × 106 conidia per ml homogenised in sterile water. The symptoms on inoculated plants were similar to those previously observed and the fungus was reisolated from the inoculated plants. This is the first documented report of C. de-structans as a cause of root and foot rot disease on T. minuta in Iran.

  13. Chemical Composition and Antibacterial Activity of Essential Oils of Tagetes minuta (Asteraceae) against Selected Plant Pathogenic Bacteria

    Science.gov (United States)

    Wagacha, John M.; Dossaji, Saifuddin F.

    2016-01-01

    The objective of this study was to determine the chemical composition and antibacterial activity of essential oils (EOs) of Tagetes minuta against three phytopathogenic bacteria Pseudomonas savastanoi pv. phaseolicola, Xanthomonas axonopodis pv. phaseoli, and Xanthomonas axonopodis pv. manihotis. The essential oils were extracted using steam distillation method in a modified Clevenger-type apparatus while antibacterial activity of the EOs was evaluated by disc diffusion method. Gas chromatography coupled to mass spectrometry (GC/MS) was used for analysis of the chemical profile of the EOs. Twenty compounds corresponding to 96% of the total essential oils were identified with 70% and 30% of the identified components being monoterpenes and sesquiterpenes, respectively. The essential oils of T. minuta revealed promising antibacterial activities against the test pathogens with Pseudomonas savastanoi pv. phaseolicola being the most susceptible with mean inhibition zone diameters of 41.83 and 44.83 mm after 24 and 48 hours, respectively. The minimum inhibitory concentrations and minimum bactericidal concentrations of the EOs on the test bacteria were in the ranges of 24–48 mg/mL and 95–190 mg/mL, respectively. These findings provide a scientific basis for the use of T. minuta essential oils as a botanical pesticide for management of phytopathogenic bacteria.

  14. Population biology of the gastropod Olivella minuta (Gastropoda, Olividae) on two sheltered beaches in southeastern Brazil

    Science.gov (United States)

    Petracco, Marcelo; Camargo, Rita Monteiro; Tardelli, Daniel Teixeira; Turra, Alexander

    2014-10-01

    The structure, dynamics and production of two populations of the olivid gastropod Olivella minuta were analyzed through monthly sampling from November 2009 through October 2011 on two sandy beaches, Pernambuco (very sheltered) and Barequeçaba (sheltered) in São Paulo state (23°48'S), southeastern Brazil. On both beaches, samples were taken along five transects established perpendicular to the waterline. Parameters of the von Bertalanffy growth function were estimated for both populations from monthly length-frequency distributions. The production and turnover ratios were determined using the mass-specific growth rate method. The population on the less-sheltered Barequeçaba Beach was less abundant (120.02 ± 22.60 ind m-1) than on Pernambuco Beach (3295.30 ± 504.86 ind m-1 (±SE)), which we attribute to the greater environmental stability of the latter. Conversely, the mean length, size of the largest individual, and body mass were higher at Barequeçaba than at Pernambuco. The significant differences in the growth of individuals and the mortality rate (Z) between the beaches suggest that density-dependent processes were operating at Pernambuco Beach. The production and P/B ratio at Pernambuco (12.12 g AFDM m-1 year-1 and 1.91 year-1) were higher than at Barequeçaba (0.82 g AFDM m-1 year-1 and 1.06 year-1). The difference in production can be attributed to the higher abundance on Pernambuco, while the higher P/B ratio resulted from the scarcity of smaller individuals in the intertidal zone of Barequeçaba. The P/B ratio estimated for the Pernambuco population is the highest found so far for sandy-beach gastropods. This study reinforces the theory that biological interactions are important regulators of sheltered sandy-beach populations. Future studies with multi-beach sampling are needed to better understand the life-history variations of O. minuta along gradients of degree of exposure of sandy beaches.

  15. Phytochemical studies on Azolla pinnata R. Br., Marsilea minuta L. and Salvinia molesta Mitch

    Institute of Scientific and Technical Information of China (English)

    Johnson Marimuthu Antonisamy; Mony Mahesh; Zachariah Miller Paul; Solomon Jeeva

    2011-01-01

    Objective: To evaluate the phytochemical properties of Azolla pinnata R. Br., Marsilea minuta L. and Salvinia molesta Mitch. Methods: The dried and powered leaves materials (50 g) were extracted successively with 250 mL of petroleum ether, ethyl acetate, methanol, chloroform, acetone, benzene and water by using Soxhlet extractor for 8 h at a temperature not exceeding the boiling point of the solvent. Phytochemical screening of the extracts was carried out according to the standard methods. Results: Out of eighteen tested extracts, eighteen extracts showed the presence of phenolics. Next to that, fourteen extracts were illustrated their existence of tannin. Ten extracts showed the occurrence of carbohydrates in the crude extracts of the selected plants. Steroid and saponin are present in eight extracts, next to that xanthoprotein is present in six extracts, followed by flavonoid and protein which are present in five extracts. Carboxylic acid showed its presence only in two extracts. Conclusions: From the results, it can be concluded that the three plants extracts show the presence of many bioactive compounds after extensive investigation. We recommend further research on these plants to quantify the concentration of these compounds. Further work will accentuate the isolation and characterization of active principles responsible for bio-efficacy and bioactivity.

  16. Ciliates and the rare biosphere: a review.

    Science.gov (United States)

    Dunthorn, Micah; Stoeck, Thorsten; Clamp, John; Warren, Alan; Mahé, Frédéric

    2014-01-01

    Here we provide a brief review of the rare biosphere from the perspective of ciliates and other microbial eukaryotes. We trace research on rarity from its lack of much in-depth focus in morphological and Sanger sequencing projects, to its central importance in analyses using high throughput sequencing strategies. The problem that the rare biosphere is potentially comprised of mostly errors is then discussed in the light of asking community-comparative, novel-diversity, and ecosystem-functioning questions.

  17. The use of protozoa in ecotoxicology: application of multiple endpoint tests of the ciliate E. crassus for the evaluation of sediment quality in coastal marine ecosystems.

    Science.gov (United States)

    Gomiero, A; Dagnino, A; Nasci, C; Viarengo, A

    2013-01-01

    Despite an increasing number of surveys describing adverse effects of contaminated sediments on marine organisms, few studies have addressed protists. In this study, the free-crawling marine ciliate Euplotes crassus was evaluated as the test organism for the screening of sediment toxicity using sediments from both coastal and estuarine sites of the Venice Lagoon (Marghera harbour [MH], Valle Millecampi [MV], Murano island [MI] and Lido inlet [LI]). Two endpoints of high ecological value, mortality (Mry) and replication rate (RpR), were assessed in combination with the two sublethal biomarkers of stress, endocytotic rate (Ecy) and lysosomal membrane stability (NRRT). The results showed a significant inhibition of RpR, Ecy and NRRT paralleled by a small and insignificantly increased Mry of the exposed specimens. Our results thus demonstrate that only a combination of mortality and sublethal biomarkers was able to characterise an exposure-related stress syndrome. The suite of biomarkers described here was also able to detect and resolve a pollution-induced stress syndrome at an early stage of pollution. The contamination level of the sediments was assessed using chemical analysis, by estimating bioavailability and by computing a toxic pressure coefficient (TPC) to account for potential additive effects of different pollutants. The observed biological responses were consistent with the contamination levels in sediments, suggesting a high potential for using Protozoa in bioassays to assess environmental risk in coastal marine systems.

  18. Ecotoxicity of mercury to Folsomia candida and Proisotoma minuta (Collembola: Isotomidae) in tropical soils: Baseline for ecological risk assessment.

    Science.gov (United States)

    Buch, Andressa Cristhy; Niemeyer, Júlia Carina; Fernandes Correia, Maria Elizabeth; Silva-Filho, Emmanoel Vieira

    2016-05-01

    Mercury (Hg) is a highly toxic nonessential trace metal. Despite its natural occurrence in the Earth's Crust, its concentrations have been steadily increasing in the environment due to anthropogenic sources. Recent studies have showed great concern about soil fauna, once the potential adverse effects of mercury concentrations in the environment of these invertebrates are still poorly understood, especially when linked to forest soils and tropical biota. Different collembolan species can show distinct toxicity effects to the contaminants, impairing its developing lifelong and affecting its diversity and abundance in the environment. Laboratory studies were performed to evaluate the ecotoxicity of Hg(II) to collembolan species collected in Brazil, Proisotoma minuta (autochthonous) and Folsomia candida (allochthonous), as a tool to predict effects in ecological risk assessment of tropical regions. Behavioral, acute and chronic tests were carried under temperatures of 20°C and 24°C using two test soils, natural and artificial, spiked with increasing mercury concentrations. F. candida was more sensitive to mercury contamination than P. minuta, presenting the most restrictive values of EC50 and LC50. Reproduction was a considerably more sensitive endpoint than avoidance and mortality. The 28-day lower EC50 values were found in chronic tests for F. candida in natural soil to 24°C (3.32mgHgkg(-1)), while for P. minuta was in tropical artificial soil to 20°C (4.43mgHgkg(-1)). There were similarity for each collembolan species to respond at the Hg(II) effects when exposed at 20°C and 24°C. F. candida can be suitable as a bioindicator species to mercury ecotoxicity tests in tropical forest soils. PMID:26796529

  19. Reality-and-Desire in Ciliates

    Science.gov (United States)

    Brijder, Robert; Hoogeboom, Hendrik Jan

    The theory of gene assembly in ciliates has a number of similarities with the theory of sorting by reversal. Both theories model processes that are based on splicing, and have a fixed begin and end product. The main difference is the type of splicing operations used to obtain the end product from the begin product. In this overview paper, we show how the concept of breakpoint graph, known from the theory of sorting by reversal, can be used in the theory of gene assembly. Our aim is to present the material in an intuitive and informal manner to allow for an efficient introduction into the subject.

  20. Growth and energetics of a small shorebird species in a cold environment: the little stint Calidris minuta on the Taimyr Peninsulam Siberia

    NARCIS (Netherlands)

    Tjorve, K.M.C.; Schekkerman, H.; Tulp, I.Y.M.; Underhill, L.G.; Leeuw, de J.J.; Visser, G.H.

    2007-01-01

    The little stint Calidris minuta is one of the smallest shorebird species breeding in the Arctic (weighing 4.3 g on hatching). Their chicks are small and have a high surface area-to-volume ratio. We determined prefledging growth, energy expenditure and time budgets for little stint chicks in northwe

  1. Growth and energetics of a small shorebird species in a cold environment : the little stint Calidris minuta on the Taimyr Peninsula, Siberia

    NARCIS (Netherlands)

    Tjorve, Kathleen M. C.; Schekkerman, Hans; Tulp, Ingrid; Underhill, Leslie G.; de Leeuw, Joep J.; Visser, G. Henk

    2007-01-01

    The little stint Calidris minuta is one of the smallest shorebird species breeding in the Arctic (weighing 4.3 g on hatching). Their chicks are small and have a high surface area-to-volume ratio. We determined prefledging growth, energy expenditure and time budgets for little stint chicks in northwe

  2. Effects of co-cropping Bidens pilosa (L.) and Tagetes minuta (L.) on bioaccumulation of Pb in Lactuca sativa (L.) growing in polluted agricultural soils.

    Science.gov (United States)

    Cid, Carolina Vergara; Rodriguez, Judith Hebelen; Salazar, María Julieta; Blanco, Andrés; Pignata, María Luisa

    2016-09-01

    Polluted agricultural soils are a serious problem for food safety, with phytoremediation being the most favorable alternative from the environmental perspective. However, this methodology is generally time-consuming and requires the cessation of agriculture. Therefore, the purpose of this study was to evaluate two potential phytoextractor plants (the native species Bidens pilosa and Tagetes minuta) co-cropped with lettuce growing on agricultural lead-polluted soils. The concentrations of Pb, as well as of other metals, were investigated in the phytoextractors, crop species, and in soils, with the potential risk to the health of consumers being estimated. The soil parameters pH, EC, organic matter percentage and bioavailable lead showed a direct relationship with the accumulation of Pb in roots. In addition, the concentration of Pb in roots of native species was closely related to Fe (B. pilosa, r = 0.81; T. minuta r = 0.75), Cu (T. minuta, r = 0.93), Mn (B. pilosa, r = 0.89) and Zn (B. pilosa, r = 0.91; T. minuta, r = 0.91). Our results indicate that the interaction between rhizospheres increased the phytoextraction of lead, which was accompanied by an increase in the biomass of the phytoextractor species. However, the consumption of lettuce still revealed a toxicological risk from Pb in all treatments. PMID:26940382

  3. Supplementation with Sterols Improves Food Quality of a Ciliate for Daphnia magna

    OpenAIRE

    Martin-Creuzburg, Dominik; Bec, Alexandre; Elert, Eric von

    2006-01-01

    Experimental results provide evidence that trophic interactions between ciliates and Daphnia are constrained by the comparatively low food quality of ciliates. The dietary sterol content is a crucial factor in determining food quality for Daphnia. Ciliates, however, presumably do not synthesize sterols de novo. We hypothesized that ciliates are nutritionally inadequate because of their lack of sterols and tested this hypothesis in growth experiments with Daphnia magna and the ciliate Colpidiu...

  4. Effects of cadmium on growth and motility in Euplotes aediculatus isolated from activated sludge

    Energy Technology Data Exchange (ETDEWEB)

    Salvado, H.; Gracia, M.P.; Amigo, J.M.; Rius, M. [Univ. of Barcelona (Spain)

    1997-05-01

    The presence of heavy metals as pollutants in aquatic environments has unfortunately become a common problem in recent years. The main source is sewage from industries, and its presence can cause toxic effects in aquatic environments, while reducing the efficiency of biological waste water treatment due to sludge intoxication. Despite this, most of the heavy metals are retained in the bioflocs, but cadmium (Cd) is one of the metals with the lowest retention rates, due to competition with other metals. Such low retention of this metal can result in serious problems for biological sewage treatment processes and, consequently, in the waters that receive this effluent. Since the microorganisms present in biological sewage treatment processes are fundamental in their efficiency, knowledge of the effects of biofloc-unretained heavy metals on the organisms and communities of protozoa of activated sludge is important but quite complex. Since not all species are affected in the same way, the toxic effects of heavy metals may induce unforeseen changes in the dynamics of communities, making calculation of lethal doses and tolerance limits difficult. Thus, to study the effects of a toxic agent on a particular species, it is better to carry out tests with isolated species. This study contributes to the knowledge of the toxic effects of cadmium on ciliate protozoa. 21 refs., 3 figs., 3 tabs.

  5. Experimental and modeling evidence of appendicularian-ciliate interactions

    DEFF Research Database (Denmark)

    Lombard, Fabien; Eloire, Damien; Gobet, Angelique;

    2010-01-01

    Interactions between appendicularians and ciliates were observed over the life span of Oikopleura dioica in laboratory cultures and clarified with the use of mathematical modeling and microscopic observations. Complex interactions including competition, parasitism, predation, and histophagy occur...

  6. Studies on experimental culture of a marine ciliate Fabrea salina

    Digital Repository Service at National Institute of Oceanography (India)

    Rattan, R.; Ansari, Z.A.; Chatterji, A.

    Studies were conducted on the culture of a marine ciliate, Fabrea salina in the laboratory condition. Three types of inert feed; commercial yeast, fermented wheat bran and fermented rise bran were tested to study their suitability as artificial feed...

  7. Impact of Soil Texture on Soil Ciliate Communities

    Science.gov (United States)

    Chau, J. F.; Brown, S.; Habtom, E.; Brinson, F.; Epps, M.; Scott, R.

    2014-12-01

    Soil water content and connectivity strongly influence microbial activities in soil, controlling access to nutrients and electron acceptors, and mediating interactions between microbes within and between trophic levels. These interactions occur at or below the pore scale, and are influenced by soil texture and structure, which determine the microscale architecture of soil pores. Soil protozoa are relatively understudied, especially given the strong control they exert on bacterial communities through predation. Here, ciliate communities in soils of contrasting textures were investigated. Two ciliate-specific primer sets targeting the 18S rRNA gene were used to amplify DNA extracted from eight soil samples collected from Sumter National Forest in western South Carolina. Primer sets 121F-384F-1147R (semi-nested) and 315F-959R were used to amplify soil ciliate DNA via polymerase chain reaction (PCR), and the resulting PCR products were analyzed by gel electrophoresis to obtain quantity and band size. Approximately two hundred ciliate 18S rRNA sequences were obtained were obtained from each of two contrasting soils. Sequences were aligned against the NCBI GenBank database for identification, and the taxonomic classification of best-matched sequences was determined. The ultimate goal of the work is to quantify changes in the ciliate community under short-timescale changes in hydrologic conditions for varying soil textures, elucidating dynamic responses to desiccation stress in major soil ciliate taxa.

  8. Spatio-temporal distribution of Cœlaenomenodera minuta Uhmann (Coleoptera: Chrysomelidae, a serious insect pest of oil palm (Elaeis guineensis Jacq. in the south-west region of Cameroon

    Directory of Open Access Journals (Sweden)

    Mondjeli Constantin

    2013-09-01

    Full Text Available The leaflet miner Cœlaenomenodera minuta is the main pest of oil palm in the south-west region of Cameroon. A 12 months study of spatio-temporal distribution was carried out on young and mature industrial plantations of 40 ha each at Tiko Benoe palm estate in the south-west region of Cameroon. The pest infestation (larvae and adult distribution revealed the endemic existence of C. minuta in the mature oil palm plantation. Relative null pest infestations were recorded from the young plantation. Three infestation peaks were observed. Monthly significant difference of C. minuta infestation was also recorded. The highest number of insects captured (117.3 per tree was in December. In addition, negative and relatively significant correlation was observed between monthly cumulative rainfall days and captured C. minuta individuals. These results can help to improve the conception and the implementation of an efficient control strategy against the pest.

  9. IMA Genome-F 6: Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723.

    Science.gov (United States)

    Wingfield, Brenda D; Ambler, Jon M; Coetzee, Martin P A; de Beer, Z Wilhelm; Duong, Tuan A; Joubert, Fourie; Hammerbacher, Almuth; McTaggart, Alistair R; Naidoo, Kershney; Nguyen, Hai D T; Ponomareva, Ekaterina; Santana, Quentin S; Seifert, Keith A; Steenkamp, Emma T; Trollip, Conrad; van der Nest, Magriet A; Visagie, Cobus M; Wilken, P Markus; Wingfield, Michael J; Yilmaz, Neriman

    2016-06-01

    The genomes of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica, and Penicillium freii DAOMC 242723 are presented in this genome announcement. These six genomes are from plant pathogens and otherwise economically important fungal species. The genome sizes range from 21 Mb in the case of Ceratocystiopsis minuta to 58 Mb for the basidiomycete Armillaria fuscipes. These genomes include the first reports of genomes for the genus Endoconidiophora. The availability of these genome data will provide opportunities to resolve longstanding questions regarding the taxonomy of species in these genera. In addition these genome sequences through comparative studies with closely related organisms will increase our understanding of how these pathogens cause disease. PMID:27433447

  10. Protective action of Tagetes minuta (Asteraceae) essential oil in the control of Rhipicephalus microplus (Canestrini, 1887) (Acari: Ixodidae) in a cattle pen trial.

    Science.gov (United States)

    Andreotti, Renato; Garcia, Marcos Valério; Cunha, Rodrigo Casquero; Barros, Jacqueline Cavalcante

    2013-10-18

    The Rhipicephalus microplus tick is globally regarded as the most economically important ectoparasite of livestock, and the evolution of resistance to commercial acaricides among cattle tick populations is of great concern. The essential oil derived from Tagetes minuta may be efficacious against cattle tick infestation, and the results of a cattle pen trial using this essential oil for the control of ticks are reported here. The chemical composition of the essential oil was determined by GC-MS and NMR spectroscopy analyses, which revealed the presence of four major components in the essential oil. These components represent more than 70% of the essential oil: limonene (6.96%), β-ocimene (5.11%), dihydrotagetone (54.10%) and tagetone (6.73%). The results of the cattle pen trial indicated significant differences among the average values of the analyzed biological parameters, including the number of ticks, the average weight of the ticks, the average egg weight per engorged female and larval viability. Treatment with the T. minuta essential oil prepared in this study promoted significant effects on all biological indicators analyzed. Based on the biological indicators, the essential oil showed 99.98% efficacy compared to the control group when used at a 20% concentration. The results obtained in this study suggest that the T. minuta essential oil is a potential R. microplus tick control agent and may be used to mitigate the economic losses caused by tick infestation. PMID:23778081

  11. The role of ciliate protozoa in the rumen

    Directory of Open Access Journals (Sweden)

    Charles James Newbold

    2015-11-01

    Full Text Available First described in 1843, Rumen protozoa with their striking appearance were assumed to be important for the welfare of their host. However, despite contributing up to 50% of the bio-mass in the rumen, the role of protozoa in rumen microbial ecosystem remains unclear.Phylogenetic analysis of 18S rDNA libraries generated from the rumen of cattle, sheep, and goats has revealed an unexpected diversity of ciliated protozoa although variation in gene copy number between species makes it difficult to obtain absolute quantification. Despite repeated attempts it has proven impossible to maintain rumen protozoa in axenic culture. Thus it has been difficult to establish conclusively a role of ciliate protozoa in rumen fibre degradation. The development of techniques to clone and express ciliate genes in  phage, together with bioinformatic indices to confirm the ciliate origin of the genes has allowed the isolation and characterisation of fibrolytic genes from rumen protozoa. Elimination of the ciliate protozoa increases microbial protein supply by up to 30% and reduces methane production by up to 11%. Our recent findings suggest that holotrich protozoa play a disproportionate role in supporting methanogenesis whilst the small entodiniium are responsible for much of the bacterial protein turnover. As yet no method to control protozoa in the rumen that is safe and practically applicable has been developed, however a range of plant extract capable of controlling if not completely eliminating rumen protozoa have been described.

  12. The Role of Ciliate Protozoa in the Rumen.

    Science.gov (United States)

    Newbold, Charles J; de la Fuente, Gabriel; Belanche, Alejandro; Ramos-Morales, Eva; McEwan, Neil R

    2015-01-01

    First described in 1843, Rumen protozoa with their striking appearance were assumed to be important for the welfare of their host. However, despite contributing up to 50% of the bio-mass in the rumen, the role of protozoa in rumen microbial ecosystem remains unclear. Phylogenetic analysis of 18S rDNA libraries generated from the rumen of cattle, sheep, and goats has revealed an unexpected diversity of ciliated protozoa although variation in gene copy number between species makes it difficult to obtain absolute quantification. Despite repeated attempts it has proven impossible to maintain rumen protozoa in axenic culture. Thus it has been difficult to establish conclusively a role of ciliate protozoa in rumen fiber degradation. The development of techniques to clone and express ciliate genes in λ phage, together with bioinformatic indices to confirm the ciliate origin of the genes has allowed the isolation and characterization of fibrolytic genes from rumen protozoa. Elimination of the ciliate protozoa increases microbial protein supply by up to 30% and reduces methane production by up to 11%. Our recent findings suggest that holotrich protozoa play a disproportionate role in supporting methanogenesis whilst the small Entodinium are responsible for much of the bacterial protein turnover. As yet no method to control protozoa in the rumen that is safe and practically applicable has been developed, however a range of plant extract capable of controlling if not completely eliminating rumen protozoa have been described. PMID:26635774

  13. The Tara Oceans voyage reveals global diversity and distribution patterns of marine planktonic ciliates.

    Science.gov (United States)

    Gimmler, Anna; Korn, Ralf; de Vargas, Colomban; Audic, Stéphane; Stoeck, Thorsten

    2016-01-01

    Illumina reads of the SSU-rDNA-V9 region obtained from the circumglobal Tara Oceans expedition allow the investigation of protistan plankton diversity patterns on a global scale. We analyzed 6,137,350 V9-amplicons from ocean surface waters and the deep chlorophyll maximum, which were taxonomically assigned to the phylum Ciliophora. For open ocean samples global planktonic ciliate diversity is relatively low (ca. 1,300 observed and predicted ciliate OTUs). We found that 17% of all detected ciliate OTUs occurred in all oceanic regions under study. On average, local ciliate OTU richness represented 27% of the global ciliate OTU richness, indicating that a large proportion of ciliates is widely distributed. Yet, more than half of these OTUs shared oceanic carbonate system and temperature. Planktonic ciliates displayed distinct vertical distributions relative to chlorophyll a. In contrast, the Tara Oceans dataset did not reveal any evidence that latitude is structuring ciliate communities. PMID:27633177

  14. Community Structure and Biodiversity of Soil Ciliates at Dongzhaigang Mangrove Forest in Hainan Island, China

    OpenAIRE

    Jing Li; Qingyu Liao; Mei Li; Jinhong Zhang; Nora Fungyee Tam; Runlin Xu

    2010-01-01

    The distribution of soil ciliates in three different habitats within a typical mangrove forest in Dongzhaigang, Hainan, China was investigated. The abundance, biodiversity, and community similarity of ciliates in fresh and air-dried soil with different, physical/chemical properties were analyzed. Three Classes, 11 Orders, 34 Genera, and 70 species of ciliates were found with the first dominant group being Hypotrichida. Ciliate biodiversities followed Site B < Site A < Site C in both fresh and...

  15. Evaluation of lugol solution used for counting rumen ciliates

    Directory of Open Access Journals (Sweden)

    Marta D'Agosto

    1999-01-01

    Full Text Available The present study proposes a modification of the technique described by PURSER & MOIR (1959 for the quantitative evaluation of rumen ciliate based on an adaptation described by DEHORITY (I984. The modifying process includes: the replacement of two drops of brilliant green dye, for at least four hours, by three drops of lugol solution, for at least 15 minutes. It was made a comparative evaluation of these stainings. It was concluded that lugol solution can replace the brilliant green dye showing the following advantages: staining time reduction and subsequent speeding of sample processing; evidence of skeletal plates of entodiniomorphs making its identification easier; improved observation of small ciliates and inconspicuous structures; improved total counting and generic identification of the ciliates.

  16. The Effects of Oil Pollution on Free-living Ciliates

    OpenAIRE

    ASADULLAYEVA, Esmira; ALEKPEROV, Ilham

    1999-01-01

    For the first time the effects of oil pollution on free-living ciliates at community level and also at cellular level were studied at the same time. The effects of various oil concentrations from two oil fields (Sangachal and Guneshli) on psammophile and periphyton ciliates were studied. As a result, the parameters using the oil pollution biotesting with the help of these test systems were determined. Oil from the Guneshli oil field was determined to be more toxic. The effects of oil pollutio...

  17. Evaluation of the use of Olivella minuta (Gastropoda, Olividae) and Hastula cinerea (Gastropoda, Terebridae) as TBT sentinels for sandy coastal habitats.

    Science.gov (United States)

    Petracco, Marcelo; Camargo, Rita Monteiro; Berenguel, Thayana Amorim; de Arruda, Noelle C L Patrício; del Matto, Lygia A; Amado, Lílian Lund; Corbisier, Thais Navajas; Castro, Ítalo Braga; Turra, Alexander

    2015-07-01

    Tributyltin (TBT) contamination is still recorded in the environment even after its ban in antifouling paints. Since most biomonitors of TBT contamination, through imposex evaluation, are hard-bottom gastropods, the identification of soft-bottom sentinels has become useful for regions where rocky shores and coral reefs are absent. Thus, an evaluation of Olivella minuta and Hastula cinerea as monitors of TBT contamination was performed in two sandy beaches located under influence area of São Sebastião harbor (São Paulo state, Brazil), where previous and simultaneous studies have reported environmental contamination by TBT. In addition, the imposex occurrence in H. cinerea was assessed in an area with low marine traffic (Una beach), also located in São Paulo State. A moderate imposex incidence in O. minuta was detected in Pernambuco (% I = 9.36, RPLI = 4.49 and RPLIstand = 4.27) and Barequeçaba (% I = 2.42, RPLI = 0.36 and RPLIstand = 0.81) beaches, indicating TBT contamination. In contrast, more severe levels of imposex were recorded for H. cinerea in Una beach (% I = 12.45) and mainly in Barequeçaba beach (% I = 98.92, RPLI = 26.65). Our results suggest that O. minuta and H. cinerea have good potential as biomonitors for TBT based on their wide geographical distribution, common occurrence in different coastal sediment habitats, easy collection, and association with TBT-contaminated sediments. PMID:26085280

  18. Wild Marigold - Tagetes minuta L., New Weed on the Island of Hvar, and New Contribution to the Knowledge of its Distribution in Dalmatia (Croatia

    Directory of Open Access Journals (Sweden)

    Nada Hulina

    2008-03-01

    Full Text Available Wild marigold (Tagetes minuta L., syn. T. glandulifera, familia Asteraceae is native to South America and naturalized in Europe, Africa, Asia and Australia. Its presence as an adventive plant on Balkan Peninsula was noted by Hayek (1931, Šilić (1973, Trinajstić (1974 and others. During the last 6-10 years wild marigold had appeared as weed in vineyards on the island of Hvar and become an agricultural and medical problem. However, it has also very interesting agrochemical and pharmacological properties. Disadvantages and advantages of wild marigold are considered. Weed control measures are discussed.

  19. On computational properties of gene assembly in ciliates

    Directory of Open Access Journals (Sweden)

    Vladimir Rogojin

    2010-11-01

    Full Text Available Gene assembly in stichotrichous ciliates happening during sexual reproduction is one of the most involved DNA manipulation processes occurring in biology. This biological process is of high interest from the computational and mathematical points of view due to its close analogy with such concepts and notions in theoretical computer science as permutation and linked list sorting and string rewriting. Studies on computational properties of gene assembly in ciliates represent a good example of interdisciplinary research contributing to both computer science and biology. We review here a number of general results related both to the development of different computational methods enhancing our understanding on the nature of gene assembly, as well as to the development of new biologically motivated computational and mathematical models and paradigms. Those paradigms contribute in particular to combinatorics, formal languages and computability theories.

  20. Ultrastructure of extrusomes in hypotrichous ciliate Pseudourostyla nova

    Institute of Scientific and Technical Information of China (English)

    ZHOU Yao; WANG Zhengjun; ZHANG Jun; GU Fukang

    2011-01-01

    The ultrastructure of extrusomes of the hypotrichous ciliate Pseudourostyla nova was observed in scanning and transmission electron microscopy and enzyme-cytochemistry. The results show that the distribution, morphological characteristics, morphogenesis process, and extrusive process of the extrusomes in P. nova are different from the trichocysts in Paramecium, suggesting that the extrusomes of P. nova can respond to environmental stimuli, play an important role in the defense of this species, and cannot be regarded as "trichocysts". The results also suggest that the extrusomes might be originated from the Golgi apparatus and mature in the cytoplasm; after the extrusion of mature extrusomes, the residual substance might be reabsorbed and reused by the ciliate cell via food vacuoles, and take part in material recycling of the cell.

  1. Phylogeny of intestinal ciliates, including Charonina ventriculi, and comparison of microscopy and 18S rRNA gene pyrosequencing for rumen ciliate community structure analysis.

    Science.gov (United States)

    Kittelmann, Sandra; Devente, Savannah R; Kirk, Michelle R; Seedorf, Henning; Dehority, Burk A; Janssen, Peter H

    2015-04-01

    The development of high-throughput methods, such as the construction of 18S rRNA gene clone or pyrosequencing libraries, has allowed evaluation of ciliate community composition in hundreds of samples from the rumen and other intestinal habitats. However, several genera of mammalian intestinal ciliates have been described based only on morphological features and, to date, have not been identified using molecular methods. Here, we isolated single cells of one of the smallest but widely distributed intestinal ciliates, Charonina ventriculi, and sequenced its 18S rRNA gene. We verified the sequence in a full-cycle rRNA approach using fluorescence in situ hybridization and thereby assigned an 18S rRNA gene sequence to this species previously known only by its morphology. Based on its full-length 18S rRNA gene sequence, Charonina ventriculi was positioned within the phylogeny of intestinal ciliates in the subclass Trichostomatia. The taxonomic framework derived from this phylogeny was used for taxonomic assignment of trichostome ciliate 18S rRNA gene sequence data stemming from high-throughput amplicon pyrosequencing of rumen-derived DNA samples. The 18S rRNA gene-based ciliate community structure was compared to that obtained from microscopic counts using the same samples. Both methods allowed identification of dominant members of the ciliate communities and classification of the rumen ciliate community into one of the types first described by Eadie in 1962. Notably, each method is associated with advantages and disadvantages. Microscopy is a highly accurate method for evaluation of total numbers or relative abundances of different ciliate genera in a sample, while 18S rRNA gene pyrosequencing represents a valuable alternative for comparison of ciliate community structure in a large number of samples from different animals or treatment groups.

  2. Ciliated epithelial cell lifespan in the mouse trachea and lung

    OpenAIRE

    Rawlins, Emma L.; Brigid L M Hogan

    2008-01-01

    The steady-state turnover of epithelial cells in the lung and trachea is highly relevant to investigators who are studying endogenous stem cells, manipulating gene expression in vivo, or using viral vectors for gene therapy. However, the average lifetime of different airway epithelial cell types has not previously been assessed using currently available genetic techniques. Here, we use Cre/loxP genetic technology to indelibly label a random fraction of ciliated cells throughout the airways of...

  3. The role of ciliate protozoa in the rumen

    OpenAIRE

    Newbold, Charles J.; de la Fuente, Gabriel; Belanche, Alejandro; Ramos-Morales, Eva; McEwan, Neil R.

    2015-01-01

    First described in 1843, Rumen protozoa with their striking appearance were assumed to be important for the welfare of their host. However, despite contributing up to 50% of the bio-mass in the rumen, the role of protozoa in rumen microbial ecosystem remains unclear. Phylogenetic analysis of 18S rDNA libraries generated from the rumen of cattle, sheep, and goats has revealed an unexpected diversity of ciliated protozoa although variation in gene copy number between species makes it difficult ...

  4. Ciliate Paramecium is a natural reservoir of Legionella pneumophila

    OpenAIRE

    Kenta Watanabe; Ryo Nakao; Masahiro Fujishima; Masato Tachibana; Takashi Shimizu; Masahisa Watarai

    2016-01-01

    Legionella pneumophila, the causative agent of Legionnaires’ disease, replicates within alveolar macrophages and free-living amoebae. However, the lifestyle of L. pneumophila in the environment remains largely unknown. Here we established a novel natural host model of L. pneumophila endosymbiosis using the ciliate Paramecium caudatum. We also identified Legionella endosymbiosis-modulating factor A (LefA), which contributes to the change in life stage from endosymbiosis to host lysis, enabling...

  5. Social biases determine spatiotemporal sparseness of ciliate mating heuristics

    OpenAIRE

    Clark, Kevin B

    2012-01-01

    Ciliates become highly social, even displaying animal-like qualities, in the joint presence of aroused conspecifics and nonself mating pheromones. Pheromone detection putatively helps trigger instinctual and learned courtship and dominance displays from which social judgments are made about the availability, compatibility, and fitness representativeness or likelihood of prospective mates and rivals. In earlier studies, I demonstrated the heterotrich Spirostomum ambiguum improves mating compet...

  6. Effect of ciliates on nitrification and nitrifying bacteria in Baltic Sea sediments

    OpenAIRE

    Prast, M.; Bischof, Adrian A.; Waller, Uwe; Amann, R.; Berninger, U.-G.

    2007-01-01

    Nitrification in aquatic sediments is catalyzed by bacteria. While many autecological studies on these bacteria have been published, few have regarded them as part of the benthic microbial food web. Ciliates are important as grazers on bacteria, but also for remineralization of organic matter. We tested the hypothesis that ciliates can affect nitrification. Experiments with Baltic Sea sediments in laboratory flumes, with or without the addition of cultured ciliates, were conducted. We found i...

  7. Social biases determine spatiotemporal sparseness of ciliate mating heuristics.

    Science.gov (United States)

    Clark, Kevin B

    2012-01-01

    Ciliates become highly social, even displaying animal-like qualities, in the joint presence of aroused conspecifics and nonself mating pheromones. Pheromone detection putatively helps trigger instinctual and learned courtship and dominance displays from which social judgments are made about the availability, compatibility, and fitness representativeness or likelihood of prospective mates and rivals. In earlier studies, I demonstrated the heterotrich Spirostomum ambiguum improves mating competence by effecting preconjugal strategies and inferences in mock social trials via behavioral heuristics built from Hebbian-like associative learning. Heuristics embody serial patterns of socially relevant action that evolve into ordered, topologically invariant computational networks supporting intra- and intermate selection. S. ambiguum employs heuristics to acquire, store, plan, compare, modify, select, and execute sets of mating propaganda. One major adaptive constraint over formation and use of heuristics involves a ciliate's initial subjective bias, responsiveness, or preparedness, as defined by Stevens' Law of subjective stimulus intensity, for perceiving the meaningfulness of mechanical pressures accompanying cell-cell contacts and additional perimating events. This bias controls durations and valences of nonassociative learning, search rates for appropriate mating strategies, potential net reproductive payoffs, levels of social honesty and deception, successful error diagnosis and correction of mating signals, use of insight or analysis to solve mating dilemmas, bioenergetics expenditures, and governance of mating decisions by classical or quantum statistical mechanics. I now report this same social bias also differentially affects the spatiotemporal sparseness, as measured with metric entropy, of ciliate heuristics. Sparseness plays an important role in neural systems through optimizing the specificity, efficiency, and capacity of memory representations. The present

  8. Act together – implications of symbioses in aquatic ciliates

    Directory of Open Access Journals (Sweden)

    Claudia eDziallas

    2012-08-01

    Full Text Available Mutual interactions in form of symbioses can increase the fitness of organisms and provide them with the capacity to occupy new ecological niches. The formation of obligate symbioses allows for rapid evolution of new life forms including multitrophic consortia. Microbes are important components of many known endosymbioses and their short generation times and strong potential for genetic exchange may be important drivers of speciation. Hosts provide endo- and ectosymbionts with stable, nutrient-rich environments and protection from environmental stresses. This is of particular importance in aquatic ecosystems, which are often highly variable, harsh and nutrient-deficient habitats. Thus it is not surprising that symbioses are widespread in both marine and freshwater environments. Symbioses in aquatic ciliates are good model systems for exploring symbiont-host interactions. Many ciliate species are globally distributed and have been intensively studied in the context of plastid evolution. Their relatively large cell size offers an ideal habitat for numerous microorganisms with different functional traits including commensalism and parasitism. Phagocytosis facilitates the formation of symbiotic relationships, particularly since some ingested microorganisms can escape the digestion. For example, photoautotrophic algae and methanogens represent endosymbionts that greatly extend the biogeochemical functions of their hosts. Consequently, symbiotic relationships between protists and prokaryotes are widespread and often result in new ecological functions of symbiotic communities. This enables ciliates to thrive under a wide range of environmental conditions including ultraoligotrophic or anoxic habitats. We summarize the current understanding of this exciting research topic to identify the many areas in which knowledge is lacking and to stimulate future research by providing an overview on new methodologies and by formulating a number of emerging

  9. The role of ciliate protozoa in the rumen

    OpenAIRE

    Charles James Newbold; Gabriel ede la Fuente; Alejandro eBelanche; Eva eRamos-Morales; Neil eMcEwan

    2015-01-01

    First described in 1843, Rumen protozoa with their striking appearance were assumed to be important for the welfare of their host. However, despite contributing up to 50% of the bio-mass in the rumen, the role of protozoa in rumen microbial ecosystem remains unclear.Phylogenetic analysis of 18S rDNA libraries generated from the rumen of cattle, sheep, and goats has revealed an unexpected diversity of ciliated protozoa although variation in gene copy number between species makes it difficult t...

  10. Grazing on autotrophic and heterotrophic picoplankton by ciliates isolated from Lake Kinneret, Israel

    NARCIS (Netherlands)

    Hadas, O.; Malinsky-Rushansky, N.; Pinkas, R.; Cappenberg, T.E.

    1998-01-01

    The rates of ingestion of three ciliates (Colpoda steinii, Cyclidium sp. and Stylonichia sp.) on fluorescently labeled heterotrophic bacteria, picocyanobacteria (Synechococcus P, CN) and a picoeukaryote isolated from Lake Kinneret were measured. Uptake values were 930, 35 and 1210 bacteria ciliate (

  11. New Primers Targeting Full-Length Ciliate 18S rRNA Genes and Evaluation of Dietary Effect on Rumen Ciliate Diversity in Dairy Cows.

    Science.gov (United States)

    Zhang, Jun; Zhao, Shengguo; Zhang, Yangdong; Sun, Peng; Bu, Dengpan; Wang, Jiaqi

    2015-12-01

    Analysis of the full-length 18S rRNA gene sequences of rumen ciliates is more reliable for taxonomical classification and diversity assessment than the analysis of partial hypervariable regions only. The objective of this study was to develop new oligonucleotide primers targeting the full-length 18S rRNA genes of rumen ciliates, and to evaluate the effect of different sources of dietary fiber (corn stover or a mixture of alfalfa hay and corn silage) and protein (mixed rapeseed, cottonseed, and/or soybean meals) on rumen ciliate diversity in dairy cows. Primers were designed based on a total of 137 previously reported ciliate 18S rRNA gene sequences. The 3'-terminal sequences of the newly designed primers, P.1747r_2, P.324f, and P.1651r, demonstrated >99% base coverage. Primer pair D (P.324f and P.1747r_2) was selected for the cloning and sequencing of ciliate 18S rRNA genes because it produced a 1423-bp amplicon, and did not amply the sequences of other eukaryotic species, such as yeast. The optimal species-level cutoff value for distinguishing between the operational taxonomic units of different ciliate species was 0.015. The phylogenetic analysis of full-length ciliate 18S rRNA gene sequences showed that distinct ciliate profiles were induced by the different sources of dietary fiber and protein. Dasytricha and Entodinium were the predominant genera in the ruminal fluid of dairy cattle, and Dasytricha was significantly more abundant in cows fed with corn stover than in cows fed with alfalfa hay and corn silage.

  12. New Primers Targeting Full-Length Ciliate 18S rRNA Genes and Evaluation of Dietary Effect on Rumen Ciliate Diversity in Dairy Cows.

    Science.gov (United States)

    Zhang, Jun; Zhao, Shengguo; Zhang, Yangdong; Sun, Peng; Bu, Dengpan; Wang, Jiaqi

    2015-12-01

    Analysis of the full-length 18S rRNA gene sequences of rumen ciliates is more reliable for taxonomical classification and diversity assessment than the analysis of partial hypervariable regions only. The objective of this study was to develop new oligonucleotide primers targeting the full-length 18S rRNA genes of rumen ciliates, and to evaluate the effect of different sources of dietary fiber (corn stover or a mixture of alfalfa hay and corn silage) and protein (mixed rapeseed, cottonseed, and/or soybean meals) on rumen ciliate diversity in dairy cows. Primers were designed based on a total of 137 previously reported ciliate 18S rRNA gene sequences. The 3'-terminal sequences of the newly designed primers, P.1747r_2, P.324f, and P.1651r, demonstrated >99% base coverage. Primer pair D (P.324f and P.1747r_2) was selected for the cloning and sequencing of ciliate 18S rRNA genes because it produced a 1423-bp amplicon, and did not amply the sequences of other eukaryotic species, such as yeast. The optimal species-level cutoff value for distinguishing between the operational taxonomic units of different ciliate species was 0.015. The phylogenetic analysis of full-length ciliate 18S rRNA gene sequences showed that distinct ciliate profiles were induced by the different sources of dietary fiber and protein. Dasytricha and Entodinium were the predominant genera in the ruminal fluid of dairy cattle, and Dasytricha was significantly more abundant in cows fed with corn stover than in cows fed with alfalfa hay and corn silage. PMID:26319789

  13. SHORT TIME DYNAMICS OF CILIATE ABUNDANCE IN THE BOHAI SEA (CHINA)

    Institute of Scientific and Technical Information of China (English)

    张武昌; 王荣

    2002-01-01

    The ciliate community in the Bohai Sea (China) was studied from23 September to 7 October 1998. A hurricane struck the study area between the two grid station investigations, which were six days apart. Six tintinnid species(Favella panamensis, Leptotintinnus nordqvisti, Tintinnopsis butschlii, T. karajacensis, T. Radix and Wangiella dicollaria) were identified. Total cililate abundance in the surface layer ranged from 20 to 770 ind/l. In the first grid investigation, Tintinnopsis karajacensis dominated in the warm, low salinity waters at the Huanghe River mouth. Aloricate ciliate sp.1 dominated in the cold, high salinity waters in the northwest of the study area and the Bohai Strait. In the second grid investigation, T. Karajacensis almost disappeared. The abundance of aloricate ciliate sp.1 decreased drastically. The aloricate ciliate sp.2 dominatedat the Bohai Strait. The change of ciliate abundance may be due to the disturbance of hurricane.``

  14. Community Structure and Biodiversity of Soil Ciliates at Dongzhaigang Mangrove Forest in Hainan Island, China

    International Nuclear Information System (INIS)

    The distribution of soil ciliates in three different habitats within a typical mangrove forest in Dongzhaigang, Hainan, China was investigated. The abundance, biodiversity, and community similarity of ciliates in fresh and air-dried soil with different, physical/chemical properties were analyzed. Three Classes, 11 Orders, 34 Genera, and 70 species of ciliates were found with the first dominant group being Hypotrichida. Ciliate bio diversities followed Site B 42-), but negatively with ph and total potassium (TK). Site A and Site B and Site B and Site C showed the highest similarity in fresh and dried samples, respectively. The ubiquitous characteristics of ciliate distribution suggested their important role in food webs and nutrient cycling. The presence of Colpodida was linked with mangrove plants.

  15. Diverse modes of reproduction in the marine free-living ciliate Glauconema trihymene

    Directory of Open Access Journals (Sweden)

    Zufall Rebecca A

    2010-04-01

    Full Text Available Abstract Background Most free-living ciliates reproduce by equal fission or budding during vegetative growth. In certain ciliates, reproduction occurs inside the cyst wall, viz. reproductive cysts, but more complex reproductive strategies have generally been thought to be confined to parasitic or symbiotic species, e.g. Radiophrya spp. Results In addition to equal fission, asymmetric binary division and reproductive cysts were discovered in the free-living bacterivorous scuticociliate Glauconema trihymene Thompson, 1966. Asymmetric division is an innate physiological state that can be induced by sufficient food, and the higher the food concentration, the longer the asymmetric division persists. During asymmetric division, nuclear and somatic structures divide with transiently arrested cytokinesis and variable positioning of macronuclei. Phylogenetic analysis, based on the small subunit of ribosomal DNA (SSU rDNA sequences, showed that the G. trihymene isolate studied here nests with typical scuticociliates and is paraphyletic to both the symbiotic apostome and astome ciliates, some of which also produce progeny by asymmetric division. Conclusions The asymmetric division in G. trihymene has no precedent among undisturbed free-living ciliates. The coexistence of multiple modes of reproduction may represent a previously undescribed reproductive strategy for ciliates living on food patches in coastal waters. This may also be indicative of similar reproductive strategies among other polyphenic ciliates, which have not been intensively studied. Asymmetric division provides a special opportunity for studying ciliates' phenotypic plasticity and may also illuminate the origins of multicellularity.

  16. First report of ciliate (Protozoa) epibionts on deep-sea harpacticoid copepods

    Science.gov (United States)

    Sedlacek, Linda; Thistle, David; Fernandez-Leborans, Gregorio; Carman, Kevin R.; Barry, James P.

    2013-08-01

    We report the first observations of ciliate epibionts on deep-sea, benthic harpacticoid copepods. One ciliate epibiont species belonged to class Karyorelictea, one to subclass Suctoria, and one to subclass Peritrichia. Our samples came from the continental rise off central California (36.709°N, 123.523°W, 3607 m depth). We found that adult harpacticoids carried ciliate epibionts significantly more frequently than did subadult copepodids. The reason for the pattern is unknown, but it may involve differences between adults and subadult copepodids in size or in time spent swimming. We also found that the ciliate epibiont species occurred unusually frequently on the adults of two species of harpacticoid copepod; a third harpacticoid species just failed the significance test. When we ranked the 57 harpacticoid species in our samples in order of abundance, three species identified were, as a group, significantly more abundant than expected by chance if one assumes that the abundance of the group and the presence of ciliate epibionts on them were uncorrelated. High abundance may be among the reasons a harpacticoid species carries a ciliate epibiont species disproportionately frequently. For the combinations of harpacticoid species and ciliate epibiont species identified, we found one in which males and females differed significantly in the proportion that carried epibionts. Such a sex bias has also been reported for shallow-water, calanoid copepods.

  17. Climate scaling behaviour in the dynamics of the marine interstitial ciliate community

    Science.gov (United States)

    Varotsos, Costas A.; Mazei, Yuri A.; Burkovsky, Igor; Efstathiou, Maria N.; Tzanis, Chris G.

    2016-08-01

    The present paper uses characteristics of the marine interstitial ciliate community in the White Sea intertidal sandflat during the period of 1991-2011, in order to study its long-term dynamics, investigating in particular whether it exhibits scaling behaviour into its fluctuations, which is a characteristic feature of the climate system. To this aim, a recently proposed version of the detrended fluctuation analysis is herewith employed which has been successfully applied to a wide range of simulated and physiologic time series in recent years. In case that the fluctuations of the ciliate community present self-similarity processes, an ideal field test for the currently proposed biological models will be established, allowing to evaluate their reliability. Indeed, we show for the first time that different ciliate species exhibit long-range power-law persistent correlations. This means that ciliate fluctuations in different intervals are positively correlated, obeying a power-law behaviour. Although the origin of power-law temporal evolution of ciliates should be further investigated, this finding is probably associated with the self-organized criticality of ciliates. It should be noted that the long-range correlations obtained do not imply the presence of specific cycles but rather the existence of dynamic links between long-term and short-term temporal evolution. The scaling behaviour found in marine interstitial ciliate community should be taken into account in the investigation of their response to the present or future climate change.

  18. The effects of different fertilizers on the ciliate communities of forests

    International Nuclear Information System (INIS)

    The influence of lime, mineral fertilizers and different composts on the ciliate communities (Protozoa: Ciliophora) of very acidified spruce forests were tested. In succession culture experiments species range, total numbers, abundance and dominance structure of the ciliate communities showed continued changes over a 90 day period. This method offers the opportunity not only to diagnose, but also to quantify effects of soil treatments. Investigations at the ARINUS-site Schluchsee (Black Forest) showed the following results: Liming led to a greater change in the ciliate communities than fertilization with magnesium-sulphate and ammonia-sulphate. Liming and treatment with compost, made from household garbage, and compost, made from chopped wood on the Beimerstetten site (Swabian Alb) led also to remarkably changes in the ciliate communities. The total ciliate numbers of the household garbage area were very low. In contrast, the ciliate community of the chopped wood compost areas were characterized by a great species number and high abundances of spirotrichuous ciliates, especially Halteria grandinella. (orig./UWA)

  19. Effect of salt and urban water samples on bacterivory by the ciliate, Tetrahymena thermophila

    Energy Technology Data Exchange (ETDEWEB)

    St Denis, C.H.; Pinheiro, M.D.O.; Power, M.E. [Department of Biology, University of Waterloo, 200 University Ave. W, Waterloo, Ontario N2L 3G1 (Canada); Bols, Niels C., E-mail: ncbols@uwaterloo.c [Department of Biology, University of Waterloo, 200 University Ave. W, Waterloo, Ontario N2L 3G1 (Canada)

    2010-02-15

    The effect of road salt on the eating of bacteria or bacterivory by the ciliate, Tetrahymena thermophila, was followed in non-nutrient Osterhout's solution with Escherichia coli expressing green fluorescent protein. Bacterivory was impaired at between 0.025 and 0.050% w/v but the ciliates appeared to have normal morphologies and motilities, whereas at above 0.1%, bacterivory was blocked and many ciliates died. By contrast, E. coli remained viable, suggesting salt could alter predator-prey relationships in microbial communities. In nutrient medium, salt was not toxic and the ciliates grew. After growth in salt, ciliates consumed bacteria in 0.2% salt, indicating the salt acclimation of bacterivory. Bacteria and ciliates were added to urban creek samples to compare their capacity to support exogenous bacterivory. Even though samples were collected weekly for a year and be expected to have fluctuating salt levels as a result of deicing, all creek samples supported a similar level of bacterivory. - Road salt at some concentrations inhibits bacterivory by ciliates, and thus potentially could alter the microbial food web.

  20. Ciliated hepatic foregut cyst: report of first case in China and review of literature

    Institute of Scientific and Technical Information of China (English)

    蔡秀军; 黄迪宇; 梁霄; 虞洪; 李伟; 王先法; 彭淑牖

    2004-01-01

    Objective: To report the first case of ciliated hepatic foregut cyst in China, and review of literature to introduce the characteristics of this disease for doctors to recognize this disease.Method: Report the clinical procedure of diagnosis and treatment for the first case of ciliated hepatic foregut cyst in China, and to review the embryologic genesis, incidence,clinical manifestation, radiologic features and therapeutic principle of this disease. Results: We performed the resection for ciliated hepatic foregut cyst under laparoscopy; the patient recovered well after the procedure. Conclusion: Ciliated hepatic foregut cyst is quite rare clinically, belongs to non-parasitic,solitary and unilocular cystic lesion, is always less than 4cm in diameter, mostly seen in the left lobe, and has the tendency of malignant change. It should be removed as soon as diagnosed.

  1. Benthic ciliate and meiofaunal communities in two contrasting habitats of an intertidal estuarine wetland

    Science.gov (United States)

    Du, Yongfen; Xu, Kuidong; Warren, Alan; Lei, Yanli; Dai, Renhai

    2012-05-01

    Annual variations in benthic meiofaunal and ciliated protozoan communities were investigated using monthly samplings from June 2006 to May 2007 in two habitats characterized by different vegetal coverage in an estuarine intertidal wetland of Qingdao Jiaozhou Bay, China. The sediment composition was stable at each site: sediments densely covered with seagrass (Suaeda glauca) in the lower estuarine site (Station S) were finer, with higher content of organic matter, phaeopigments and water than sediments at the upper estuarine site (Station S-P) which was unvegetated other than for patches of S. glauca and common reed (Phragmites australis). Chlorophyll a exhibited a similar distribution in the two habitats. A total of 14 meiofaunal groups, and 249 species of ciliates belonging to 37 genera, 28 families and 16 orders, were isolated from the two sites. Univariate and multivariate measures of the communities were significantly different between the two habitats. There were higher abundances of ciliates and meiofauna, and a greater diversity of ciliates, at Station S than Station S-P (223 vs. 61 species). Herbivorous ciliates were numerically predominant in ciliate communities at both sites. The representative ciliates at Station S-P belonged to the Cyrtophorida and appeared to be a reduced subset of the assemblage at Station S, which was characterized by members of the Prostomatida, Cyrtophorida, Hypotrichida and Scuticociliatida. More than 96% of the total meiofauna were nematodes, accounting for 93% of the differences in the abundance compositions of the meiofaunal communities between habitats. The average individual weights of nematodes were nearly 3 times greater at Station S than Station S-P, indicating a distinctive species composition at each site. Temperature, salinity and food availability were key factors that regulated the ciliate and meiofaunal community structure. Nematodes were the dominant group in terms of the combined abundance, biomass and benthic

  2. Population dynamics of Moina minuta Hansen (1899, Ceriodaphnia cornuta Sars (1886, and Diaphanosoma spinulosum Herbst (1967 (Crustacea: Branchiopoda in different nutrients (N and P concentration ranges Dinâmica populacional de Moina minuta Hansen (1899, Ceriodaphnia cornuta Sars (1886 e Diaphanosoma spinulosum Herbst (1967 (Crustacea: Branchiopoda em diferentes faixas de concentração de nutrientes (N e P

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    Ana Carolina Brito Vieira

    2011-03-01

    Full Text Available AIM: Aquatic environments of semi-arid regions are subject to changes in water quality and volume due to short and irregular rain seasons. Consequently, zooplankton composition changes in association to fluctuations in the trophic degree. To comprehend these processes, this study analyzed the influence of nutrient concentrations (N and P on the population dynamics of three species of Cladocera - Moina minuta, Ceriodaphnia cornuta, and Diapahnosoma spinulosum - from the Taperoá II Dam, Paraíba, Brazil; METHODS: Animals were experimentally submitted to different nutrient concentrations as a means to reproduce specific trophic conditions from natural environments. Zooplankton densities were evaluated once every three days, with food (i.e. algal cultures being supplied in alternate days. To compare population growth, an ANOVA was performed, followed by Tukey's HSD post-hoc test; RESULTS: The population growth of the three species differed significantly both among species and among treatments. Moina minuta populations showed higher growth rates under higher nutrient concentrations, whereas Ceriodaphnia cornuta growed more efficiently in intermediate concentrations, and Diaphanosoma spinulosum showed a better development in low nutrient concentrations; CONCLUSIONS: The results from the experimental approach, presented here, are similar to what is observed in the field, based on previous studies carried out in the Taperoá II Dam. Therefore, these results suggest that the hydrological cycle seems to be the major determinant of zooplankton population dynamics in aquatic semi-arid environmentsOBJETIVO: Os ambientes aquáticos de regiões semi-áridas sofrem alterações na qualidade da água e no seu volume devido à irregularidade do período chuvoso. Consequentemente, o zooplâncton sofre alterações em sua composição com a evolução do estado trófico. Para a compreensão desse processo, este trabalho analisou experimentalmente a influência da

  3. Ciliated protozoa of two antarctic lakes: analysis by quantitative protargol staining and examination of artificial substrates

    Science.gov (United States)

    Kepner, R. L. Jr; Wharton, R. A. Jr; Coats, D. W.; Wharton RA, J. r. (Principal Investigator)

    1999-01-01

    Planktonic and artificial substrate-associated ciliates have been identified in two perennially ice-covered antarctic lakes of the McMurdo Dry Valleys. Abundances estimated by quantitative protargol staining ranged from < 5 to 31690 cells l-1, levels that are comparable to those previously obtained using other methods. Nineteen ciliate taxa were identified from these lakes, with the most frequently encountered genera being Plagiocampa, Askenasia, Monodinium, Sphaerophrya and Vorticella. The taxonomic findings compare favorably with those of previous investigators; however four previously unreported genera were observed in both Lakes Fryxell and Hoare. The variability in the depth distributions of ciliates in Lake Fryxell is explained in terms of lake physicochemical properties and ciliate prey distributions, while factors related to temporal succession in the Lake Hoare assemblage remain unexplained. Local marine or temperate zone freshwater habitats are a more likely source than the surrounding dry valleys soils for present ciliate colonists in these lakes. Although the taxonomic uncertainties require further examination, our results suggest that ciliate populations in these antarctic lakes undergo significant fluctuations and are more diverse than was previously recognized.

  4. Application of nested PCR-DGGE (denaturing gradient gel electrophoresis) for the analysis of ciliate communities in soils.

    Science.gov (United States)

    Shimano, Satoshi; Sambe, Mitsuo; Kasahara, Yasuhiro

    2012-01-01

    Ciliates play important roles as prey and predators in ecosystems. Changes in the ciliate community can affect the composition and population of microfauna and microflora in ecosystems. To investigate the structure of ciliate communities, we developed a nested PCR-DGGE method, which combines a universal eukaryotic-specific primer set in the first PCR step with a ciliate-specific primer set in the second PCR step, to amplify 18S rRNA genes from ciliates. The 300 bp DGGE fragments generated more bands on the gel than the 600 bp DGGE fragments. Prior to bead beating, DNA extraction of ciliates from soil samples was optimized with a combination of freeze-thaw cycles and ultrasonication. We applied this nested PCR-DGGE method to agricultural soils amended with 0, 120, 300, and 600 t ha⁻¹ year⁻¹ of livestock slurry. The results from the DGGE profiles and principal component analysis (PCA) revealed that the supplement of slurry to soils influenced the ciliate communities. From phylogenetic analysis, 108 DGGE bands were assigned to six classes, which included Spirotrichea and Colpodea, of the subphylum Intramacronucleata, and one class of the subphylum Postciliodesmatophora. These results indicated that a wide variety of taxonomic groups were detected by DGGE profiling. Thus, the nested PCR-DGGE method described here could clearly differentiate between ciliate communities within soil samples and allowed for the phylogenetic identification of these ciliates at the class level.

  5. Ciliate Paramecium is a natural reservoir of Legionella pneumophila

    Science.gov (United States)

    Watanabe, Kenta; Nakao, Ryo; Fujishima, Masahiro; Tachibana, Masato; Shimizu, Takashi; Watarai, Masahisa

    2016-01-01

    Legionella pneumophila, the causative agent of Legionnaires’ disease, replicates within alveolar macrophages and free-living amoebae. However, the lifestyle of L. pneumophila in the environment remains largely unknown. Here we established a novel natural host model of L. pneumophila endosymbiosis using the ciliate Paramecium caudatum. We also identified Legionella endosymbiosis-modulating factor A (LefA), which contributes to the change in life stage from endosymbiosis to host lysis, enabling escape to the environment. We isolated L. pneumophila strains from the environment, and they exhibited cytotoxicity toward P. caudatum and induced host lysis. Acidification of the Legionella-containing vacuole (LCV) was inhibited, and enlarged LCVs including numerous bacteria were observed in P. caudatum infected with L. pneumophila. An isogenic L. pneumophila lefA mutant exhibited decreased cytotoxicity toward P. caudatum and impaired the modification of LCVs, resulting in the establishment of endosymbiosis between them. Our results suggest that L. pneumophila may have a mechanism to switch their endosymbiosis in protistan hosts in the environment. PMID:27079173

  6. High cryptic soil ciliate (Ciliophora, Hypotrichida) diversity in Australia.

    Science.gov (United States)

    Kumar, Santosh; Foissner, Wilhelm

    2016-04-01

    The diversity and distribution of soil ciliates from Australia is poorly known. Thus, we studied eight taxa, using the non-flooded Petri dish culture method, live observation, silver impregnation, detailed morphometrics, ontogenesis, and reinvestigation of type slides. At first glance, the Australian taxa looked very similar to described species, however, detailed investigations resulted in the identification of six cryptic species: Afroamphisiella multinucleata minima nov. subspec., Cladotricha similis nov. spec., Erimophrya similis nov. spec., Heterogonostomum salinarum nov. gen., nov. spec., Pseudohemisincirra arabica australiensis nov. subspec., and Pattersoniella (Pattersoniellides) australiensis nov. subgen., nov. spec. This new subgenus is unique among all described hypotrichs in having reduced some anterior paroral dikinetids the fibrillar associates of which are, however, still present. Only two of the eight taxa are possibly cosmopolitans: Apourosomoida halophilaFoissner et al., 2002 and Urosoma karinaeFoissner, 1987. This supports the moderate endemicity model, i.e., that a third of protists have a restricted distribution (Foissner, Chao and Katz 2008). PMID:26844781

  7. Ciliate Paramecium is a natural reservoir of Legionella pneumophila

    Science.gov (United States)

    Watanabe, Kenta; Nakao, Ryo; Fujishima, Masahiro; Tachibana, Masato; Shimizu, Takashi; Watarai, Masahisa

    2016-04-01

    Legionella pneumophila, the causative agent of Legionnaires’ disease, replicates within alveolar macrophages and free-living amoebae. However, the lifestyle of L. pneumophila in the environment remains largely unknown. Here we established a novel natural host model of L. pneumophila endosymbiosis using the ciliate Paramecium caudatum. We also identified Legionella endosymbiosis-modulating factor A (LefA), which contributes to the change in life stage from endosymbiosis to host lysis, enabling escape to the environment. We isolated L. pneumophila strains from the environment, and they exhibited cytotoxicity toward P. caudatum and induced host lysis. Acidification of the Legionella-containing vacuole (LCV) was inhibited, and enlarged LCVs including numerous bacteria were observed in P. caudatum infected with L. pneumophila. An isogenic L. pneumophila lefA mutant exhibited decreased cytotoxicity toward P. caudatum and impaired the modification of LCVs, resulting in the establishment of endosymbiosis between them. Our results suggest that L. pneumophila may have a mechanism to switch their endosymbiosis in protistan hosts in the environment.

  8. Tintinnid ciliates of Amundsen Sea (Antarctica plankton communities

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    John R. Dolan

    2013-05-01

    Full Text Available The Amundsen Sea has been described as one of the most productive and dynamic pelagic systems in Antarctica and is one of the least studied. Based on samples from 15 stations in the Amundsen Sea, we describe for the first time the composition of the tintinnid ciliate assemblage of the microzooplankton. We compared the species compositions of coastal polynya sites, where the phytoplankton communities are dominated by Phaeocystis, to those of the offshore deep water sites, which are dominated by diatoms. We found a total of 15 species. Polynya sites were dominated by a few species of tintinnids, mostly those endemic to the Southern Ocean. In contrast, the deep-water sites contained many widespread tintinnid species, which are known from a wide variety of systems as well as other areas of the Southern Ocean. We examined polymorphism known to characterize the Antarctic tintinnid species Cymatocylis affinis/convallaria and Codonellopsis gaussi. We found that the types or forms found appeared unrelated to the type of microplankton community, defined by the identity of the dominant phytoplankton taxa. However, the number of different morphotypes found at a site appeared related to the overall concentration of the species, suggesting that different morphologies, previously considered distinct species, may simply be developmental stages.

  9. Hydrodynamical entrapment of ciliates at the air-liquid interface

    Science.gov (United States)

    Ferracci, Jonathan; Ueno, Hironori; Numayama-Tsuruta, Keiko; Imai, Yohsuke; Yamaguchi, Takami; Ishikawa, Takuji

    2012-11-01

    We found the new phenomenon of the entrapment of ciliates at the air-water interface, though they are not trapped by a solid interface. We first characterize the behaviours of cells at the interface by comparing it to those away from interfaces. The results showed that the cell's swimming velocity is considerably reduced at the air-water interface. In order to experimentally verify the possible physiological causes of the entrapment, we observed their behaviours in absence of positive chemotaxis for oxygen and the negative geotaxis. The results illustrated that the entrapment phenomenon was not dependent on these physiological conditions. The experiments using surfactant revealed that the entrapment phenomenon was strongly affected by the velocity-stress conditions at the interface. This fact was confirmed numerically by a boundary element method, i.e. the stress-free condition at the air-liquid interface is one of the main mechanisms of the entrapment phenomenon found in the experiments. Since the entrapment phenomenon found in this study affects the cell-cell interactions and the mass transport at the interface, the knowledge obtained in this study is useful for better understanding the complex behaviours of swimming microorganisms in nature. PhD student in the Physiological Flow Studies Laboratory.

  10. Philasterides dicentrarchi, a histophagous ciliate causing scuticociliatosis in olive flounder, Philasterides dicentrarchi--histopathology investigations.

    Science.gov (United States)

    Harikrishnan, Ramasamy; Jin, Chang-Nam; Kim, Ju-Sang; Balasundaram, Chellam; Heo, Moon-Soo

    2012-03-01

    Philasterides dicentrarchi is a histophagous scuticociliate infecting Korean olive flounder farms in Jeju Island, South Korea, where it causes significant economic losses. However, the route of entry of these parasites in olive flounder is currently unknown. In the present study, we attempted experimental infection with different doses (concentrations) of P. dicentrarchi by intraperitoneal (IP) injection; maximum cumulative mortality of 95% was recorded on the administration of 2.1×10(8) ciliates/ml. In small size group (3 cm length, 24±2 gwt) the ciliates were found in connective tissues of muscle, fins, and nervous tissue while in large size group (5 cm length, 47±3 gwt), the ciliates were predominantly occurred with associated symptoms of liquefaction in the central nervous system. The major clinico-pathological manifestations were loss of scales, appearance of bleached spots that coalesced to form brownish patches, hemorrhagic, and severe dermal necrotic lesion. In addition there was degeneration of muscle fibers, necrosis of the hepatic parenchyma, and severe edema of the intestinal walls, extensive fouling, necrotic degeneration and hyperplasia in the gill bronchial epithelium. In this study, many ciliates were found in the blood vessel, brain, dorsal fins, muscle, kidney, and vertebra of infected flounder. The histopathological investigations are of significant importance in view of possible routes of entry into the host and doses of ciliates that trigger fast infection for potential utility of drugs as a strategy for the control of P. dicentrarchi in farmed olive flounder.

  11. Epithelial Cell Culture from Human Adenoids: A Functional Study Model for Ciliated and Secretory Cells

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    Claudia González

    2013-01-01

    Full Text Available Background. Mucociliary transport (MCT is a defense mechanism of the airway. To study the underlying mechanisms of MCT, we have both developed an experimental model of cultures, from human adenoid tissue of ciliated and secretory cells, and characterized the response to local chemical signals that control ciliary activity and the secretion of respiratory mucins in vitro. Materials and Methods. In ciliated cell cultures, ciliary beat frequency (CBF and intracellular Ca2+ levels were measured in response to ATP, UTP, and adenosine. In secretory cultures, mucin synthesis and secretion were identified by using immunodetection. Mucin content was taken from conditioned medium and analyzed in the presence or absence of UTP. Results. Enriched ciliated cell monolayers and secretory cells were obtained. Ciliated cells showed a basal CBF of 10.7 Hz that increased significantly after exposure to ATP, UTP, or adenosine. Mature secretory cells showed active secretion of granules containing different glycoproteins, including MUC5AC. Conclusion. Culture of ciliated and secretory cells grown from adenoid epithelium is a reproducible and feasible experimental model, in which it is possible to observe ciliary and secretory activities, with a potential use as a model to understand mucociliary transport control mechanisms.

  12. Toxicity of methyl tert butyl ether to soil invertebrates (springtails: Folsomia candida, Proisotoma minuta, and Onychiurus folsomi) and lettuce (Lactuca sativa).

    Science.gov (United States)

    Dodd, Matthew; Addison, Janet A

    2010-02-01

    Experiments were conducted to assess the toxicity of methyl tert butyl ether (MTBE) to three species of Collembola (Proisotoma minuta, Folsomia candida, and Onychiurus folsomi) and lettuce (Lactuca sativa L.) using an artificial Organization for Economic Cooperation and Development (OECD) soil and field-collected sandy loam and silt loam soil samples. Soil invertebrate tests were carried out in airtight vials to prevent volatilization of MTBE out of the test units and to allow for direct head-space sampling and gas chromatography-mass spectrometry (GC-MS) analysis for residual MTBE. The use of the airtight vial protocol proved to be very successful, in that the measured MTBE concentrations at the beginning of the experiments were within 95% of nominal concentrations. The test methods used in this study could be used to test the toxicity of other volatile organic compounds to Collembola. The soil invertebrates tested had inhibitory concentration (ICx) and lethal concentration (LCx) values that ranged from 242 to 844 mg MTBE/kg dry soil. When the three test species of Collembola were tested under identical conditions in the artificial OECD soil, O. folsomi was the most sensitive collembolan, with a median inhibitory concentration (IC50; reproduction) of 296 mg MTBE/kg dry soil. The most sensitive endpoint for lettuce was an IC50 for root length of 81 mg MTBE/kg dry soil after 5 d of germination in OECD soil. Data on the loss of MTBE from the three test soils over time indicated that MTBE was retained in the silt loam soil longer than in either the sandy loam or the artificial OECD soil. PMID:20821452

  13. Analysis of Tb{sup 3+}- and melittin-binding with the C-terminal domain of centrin in Euplotes octocarinatus

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    Zhao Yaqin; Diao Xiuling; Yan Jun; Feng Yanan [Key Laboratory of Chemical Biology and Microcular Engineering of Ministry of Education, Shanxi University, Taiyuan 030006 (China); Wang Zhijun [Chemical Department, Changzhi University, Changzhi 046011 (China); Liang Aihua, E-mail: aliang@sxu.edu.cn [Key Laboratory of Chemical Biology and Microcular Engineering of Ministry of Education, Shanxi University, Taiyuan 030006 (China); Yang Binsheng, E-mail: yangbs@sxu.edu.cn [Key Laboratory of Chemical Biology and Microcular Engineering of Ministry of Education, Shanxi University, Taiyuan 030006 (China)

    2012-04-15

    Centrin is a low molecular mass (20 KDa) protein that belongs to the EF-hand superfamily. In this work, the interaction between the Tb{sup 3+}-saturated C-terminal domain of Euplotes octocarinatus centrin (Tb{sub 2}-C-EoCen) and 2-p-toluidinylnaphthalene-6-sulfonate (TNS) was investigated using difference UV-vis spectra and the fluorescence spectra methods. In 100 mM N-2-hydroxy-ethylpiperazine-N-2-ethanesulfonic acid (Hepes) at pH 7.4, with the addition of Tb{sub 2}-C-EoCen, four new peaks were observed at 265 nm, 278 nm, 317 nm and 360 nm by absorptivity compared with blank solution of TNS. At the same time, the reaction could be measured by fluorescence spectra. The fluorescence emission of TNS was shifted from 480 nm to 445 nm in the presence of Tb{sub 2}-C-EoCen. Meanwhile, its fluorescence intensity was increased markedly. The 1:1 stoichiometric ratio of C-EoCen to TNS was confirmed by fluorescence titration curves. The conditional binding constants of TNS with C-EoCen and Tb{sub 2}-C-EoCen were calculated to be log K{sub (C-EoCen-TNS)}=5.32{+-}0.04 M{sup -1} and log K{sub (Tb2-C-EoCen-TNS)}=5.58{+-}0.12 M{sup -1}, respectively. In addition, the protein of Tb{sub 2}-C-EoCen binding with melittin was also studied. Based on the fluorescence titration curves, the 1:1 stoichiometric ratio of Tb{sub 2}-C-EoCen to melittin was confirmed. And the conditional binding constant of C-EoCen with melittin was calculated to be log Ka Prime =6.79{+-}0.17 M{sup -1}. - Highlights: Black-Right-Pointing-Pointer Tb{sup 3+} induced conformational changes of protein C-EoCen from closed state to open state. Black-Right-Pointing-Pointer Conformational changes resulted in the exposure of hydrophobic surfaces on C-EoCen. Black-Right-Pointing-Pointer Tb{sub 2}-C-EoCen may bind with target peptide melittin.

  14. Estimativa do tamanho das fêmeas com ovos de Moina minuta Hansen, 1899 (Cladocera, Crustacea no lago Amapá, Rio Branco, Estado do Acre, Brasil Estimating the size of ovigerous females of Moina minuta (Cladocera - Crustacea in Amapá Lake, Rio Branco, state of Acre, Brazil

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    Elsa Rodrigues Hardy

    2002-05-01

    Full Text Available Moina minuta, uma espécie tropical de Cladocera, foi selecionada para o estudo do tamanho médio de maturidade e produção de ovos da fêmea, por ser abundante e freqüente nas amostras, durante a fase de águas baixas do ano de 1997 e fase de águas altas em 1998, no lago Amapá, na Amazônia Ocidental. A primipara apresentou tamanhos de 330 µm e 340 µm, respectivamente, na fase de águas baixas e fase de águas altas. Os indivíduos de M. minuta alcançaram tamanho máximo nas águas altas (595 µm. O tamanho médio das fêmeas ovígeras, na fase de águas baixas, foi de 501 µm, produzindo em média 4,41 ovos/fêmea, enquanto que na fase de águas altas foi de 533 µm, com uma média de 4,84 ovos/fêmea. Os resultados, demonstrados através da análise do teste t e teste F de Fischer, mostraram que não houve diferenças estatísticas nos tamanhos dos indivíduos (t= -10,69, F=1,20 e P>0,1227, como também nos tamanhos das fêmeas ovígeras (t= -4,45, F=1,02 e P>0,8906, considerando os dois períodos sazonais estudados.Moina minuta, a tropical species of Cladocera, was selected for the study of medium size at maturity and female egg production, due to its abundance and frequency in samples during low-water season in 1997 and high-water season in 1998, in Amapá Lake, Western Amazônia. The primiparous female had a size of 330 µm and 340 µm in low and high water, respectively. Moina individuals reached maximum size during high water (595µm. The medium size of the ovigerous females, in low water was 501 µm, producing an average of 4.41 eggs/female, while in high water, it was 533µm, with an average egg production of 4.84 eggs/female. The results, analyzed by the t test and Fischer’s F test, showed that there were no statistical differences in size among individuals (t= -10.69, F=1.20 and P>0.1227, nor among ovigerous females (t= -4.45, F=1.02 and P>0.8906, considering the two seasons.

  15. Species Composition, Ecological Parameters and Seasonal Changes of Planktonic Ciliates Population in Bukan Dam Reservoir

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    A. M. Azary

    2010-01-01

    Full Text Available Problem statement: Since there is no evidence to identify present species in the Bukan dam reservoir, therefore, this study was conducted to provide background for fisheries purposes. Approach: The abundance and species composition of ciliates were analyzed in the Bukan Dam reservoir (west Azerbaijan, Iran from January to December 2007. Surface water samples were collected at monthly intervals at two different points, open water (Station 1, 3 and in the shallowest area of the reservoir (Station 2, 4 and examined for planktonic protozoa composition and density. Chlorophyll a was analyzed and a few ecological parameters such as dissolved oxygen, pH, turbidity and temperature were measured. Results: Totally 50 ciliates species were found in Bukan dam reservoir. Concerning the protozoa density, a high-density period was detected from January to April with a mean number of 2.86×103 cells.L-1 protozoa at Stations 1, 3 and 4.16×103 cells.L-1 protozoa at shallowest areas at stations 2, 4 thanks to disappear of phytoplankton in the winter. The summer development of protozoa was possible thanks to the development of bacteria and moderate metazooplankton densities due to the appearance of non-edible algae. The density of ciliates was low during the rest of the year. The mean number of organisms at the high-density period was approximately 4-fold more than that obtained during the low-density one. The ciliates occurring at the highest densities were Coleps tessellates, Paradileptus elephantinus, Zosterograptus labiatus, Cyclidium citrullus. Conclusion/Recommendations: It was concluded that ciliates density have important role for saprobic condition of Bukan reservoir. Therefore, it can be recommended to determine more effective parameters for density of ciliates and management policies must be programmed in order to improve ecological condition for this reservoir.

  16. Estabelecimento de metodologia para alimentação de Aedes aegypti (Diptera-Culicidae em camundongos swiss e avaliação da toxicidade e do efeito residual do óleo essencial de Tagetes minuta L (Asteraceae em populações de Aedes aegypti Establishment of the feeding methodology of Aedes aegypti (Diptera-Culicidae in Swiss mice and evaluation of the toxicity and residual effect of essential oil from Tagetes minuta L (Asteraceae, in populations of Aedes aegypti

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    Waldemir Pereira Lima

    2009-12-01

    Full Text Available Objetivou-se desenvolver um procedimento de alimentação de fêmeas de Aedes aegypti que não cause estresse em camundongo swiss e avaliar a toxicidade e o efeito residual do óleo essencial de Tagetes minuta L (Asteraceae em populações de Aedes aegypti. Camundongos anestesiados: um observado tempo de sedação e outro colocado em gaiola para alimentação de fêmeas. Óleo essencial, diluído em acetona, foi utilizado em bioensaios para avaliação das concentrações letais em larvas de Bauru, SP e São José do Rio Preto, SP, respectivamente, sensíveis e resistentes ao temephos. Os dados obtidos foram comparados com a cepa Rockefeller-EUA. O procedimento com camundongos foi aprovado. Não houve diferença entre as populações quanto à susceptibilidade a Tagetes minuta e os ensaios demonstraram CL50 de 0,24, 0,25 e 0,21mL L-1 e CL99,9 em 0,35, 0,39 e 0,42mL L-1, respectivamente, para Rockfeller, Bauru e São José do Rio Preto. Não foi observado efeito residual da solução.The objectives here were to develop a procedure for feeding females of Aedes aegypti that does not cause stress in Swiss mice and to evaluate the toxicity and residual effect of essential oil from Tagetes minuta L. (Asteraceae in Aedes aegypti populations. Two mice were anesthetized: one was used to observe the duration of sedation and the other was placed in a cage to feed the female mosquitoes. Essential oil was diluted in acetone and used in bioassays to assess the lethal concentrations in larvae from the Cities of Bauru (SP and São José do Rio Preto (SP that were sensitive and resistant to temephos, respectively. The data obtained were compared with the American Rockefeller strain. The procedure with mice was approved. There was no difference between the populations regarding susceptibility to Tagetes minuta, and the assays showed LC50 of 0.24, 0.25 and 0.21 ml/l and LC99.9 of 0.35, 0.39 and 0.42 ml/l, for Rockefeller, Bauru and São José do Rio Preto

  17. Taxonomic list of ciliated protist (Protozoa: Ciliophora in Cojimar river, Havana, Cuba

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    Isabel de la Caridad Ymas González

    2012-09-01

    Full Text Available The taxonomic composition of ciliated protozoan’s communities from Cojimar river (Havana city was determinated, over the study period. Samples were collected from six stations located along the river. The samples were cultured in Petri dishes and were main-tained in environmental temperature and natural ilumination. Species identification was made taking into account morphological characters and Levine’s et al.(1980 taxonomic classification was used. It were identified 49 species of ciliated protozoans, which are the first records for the locality. The species are distri-buted in three classes, ten orders, eighteen families and twenty-six genera.

  18. Hyperparasitism of trichodinid ciliates on monogenean gill flukes of two marine fish.

    Science.gov (United States)

    Colorni, A; Diamant, A

    2005-06-01

    Two unusual cases of hyperparasitism of trichodinid ciliates on monogenean gill flukes are described from southern Israel (Red Sea). The first case occurred in cultured European sea bass Dicentrarchus labrax infected by Diplectanum aequans, while the second was observed in a feral devil firefish Pterois miles infected by Haliotrema sp. In both cases, the trichodinids heavily co-infested the host fish gills. The flukes were completely coated by the ciliates, which gave them a cobblestone appearance, but no damage to their tegument was apparent. Both cases are most likely a result of accidental hyperparasitism, brought about by perturbed environmental conditions. PMID:16060271

  19. Cycloheptaamylose-dansyl chloride complex as a fluorescent label of surface membranes in living ciliates.

    Science.gov (United States)

    Wyroba, E; Bottiroli, G; Giordano, P

    1981-12-01

    Labelling of surface membrane of living ciliates: Paramecium aurelia and Tetrahymena pyriformis with fluorescent compound--cycloheptaamylose-dansyl chloride complex (CDC) has been achieved. Fluorescence micrographs of the dried samples showed specific localization of CDC on the cell membrane without any intracellular penetration. On the contrary the ciliates which have been dead during labelling revealed a non-specific fluorescence of their whole bodies. Microspectrofluorimetric analysis of labelled Paramecium cells was performed with Leitz microspectrograph. Spectrum of fluorescence emission measured over the cell membrane level had maximum at 450 nm. Strikingly, the emission maximum of the cells dead at the moment of labelling was shifted 10 nm to a longer wavelength. The rate of photofading measured in this case was almost 3-fold higher than for the ciliates labelled as living ones. Fluorescence excitation spectra did not show any difference in the peak position. Thus CDC staining appears to be an useful method of supravital labelling of cell surface enabling also to distinguish--on the basis of spectral characteristics--the ciliates being alive from those dead at the moment of fluorochrome binding.

  20. Complete Genome Sequence of the Intracellular Bacterial Symbiont TC1 in the Anaerobic Ciliate Trimyema compressum

    Science.gov (United States)

    Aoyama, Hiroaki; Saitoh, Seikoh; Nikoh, Naruo; Shimoji, Makiko; Shinzato, Misuzu; Teruya, Kuniko; Hirano, Takashi; Yamada, Takanori; Nobu, Masaru K.; Tamaki, Hideyuki; Shirai, Yumi; Park, Sanghwa; Narihiro, Takashi; Liu, Wen-Tso; Kamagata, Yoichi

    2016-01-01

    A free-living ciliate, Trimyema compressum, found in anoxic freshwater environments harbors methanogenic archaea and a bacterial symbiont named TC1 in its cytoplasm. Here, we report the complete genome sequence of the TC1 symbiont, consisting of a 1.59-Mb chromosome and a 35.8-kb plasmid, which was determined using the PacBio RSII sequencer. PMID:27660797

  1. Population dynamics of active and total ciliate populations in arable soil amended with wheat

    DEFF Research Database (Denmark)

    Ekelund, F.; Frederiksen, Helle B.; Ronn, R.

    2002-01-01

    microcosms, the active and total populations of ciliates, their potential prey (bacteria and small protozoa), their potential competitors (amoebae, flagellates, and nematodes), and their potential predators (nematodes). We sampled with short time intervals (2 to 6 days) and generated a data set, suitable...

  2. Ciliated muconodular papillary tumors of the lung: a clinicopathologic analysis of 10 cases.

    Science.gov (United States)

    Kamata, Tsugumasa; Yoshida, Akihiko; Kosuge, Tomoo; Watanabe, Shun-Ichi; Asamura, Hisao; Tsuta, Koji

    2015-06-01

    Ciliated muconodular papillary tumors (CMPTs) are rare peripheral nodules of the lung first described in 2002. Because of their rarity and nonstandardized diagnostic terminology, CMPTs have been poorly recognized among pathologists. To better characterize these lesions, we undertook a detailed clinicopathologic and immunohistochemical study of 10 archival cases. Ten CMPTs occurred in 7 men and 3 women with a median age of 62 years. All were small peripheral nonendobronchial nodules with a mean diameter of 1.0 cm. All but 1 tumor were incidentally detected by computed tomography-based screening, all of which were radiologically interpreted as adenocarcinomas. Although limited surgery treated all but 1 CMPT, they followed a benign course with no recurrence at a mean follow-up of 43 months (range: 2 to 88 mo). Histologically, CMPTs showed glandular and/or papillary architecture, comprising a vaguely organized mixture of nonatypical ciliated columnar cells, mucous cells, and basal cells, often enveloped by copious intra-alveolar mucin. Micropapillary tufts of ciliated cells and seemingly discontinuous growth along alveolar walls were occasionally present, mimicking adenocarcinomas. Ciliated cells and basal cells were immunopositive for TTF-1 and p40, respectively, whereas mucous cells lacked HNF4α expression. CMPTs are rare, likely benign, underrecognized processes of the lung that should be distinguished from adenocarcinomas. PMID:25803171

  3. Ciliate ingestion and digestion: flow cytometric measurements and regrowth of a digestion-resistant campylobacter jejuni

    Science.gov (United States)

    We developed a method to measure ingestion and digestion rates of bacterivorous protists feeding on pathogenic bacteria. We tested this method using the enteric bacteria Campylobacter jejuni and a freshwater colpodid ciliate. Campylobacter and a non-pathogenic bacteria isolated from the environment ...

  4. Isolation and in vitro cultivation of the fibrolytic rumen ciliate Eremoplastron (Eudiplodinium) dilobum.

    Science.gov (United States)

    Miltko, Renata; Pietrzak, Marta; Bełżecki, Grzegorz; Wereszka, Krzysztof; Michałowski, Tadeusz; Hackstein, Johannes H P

    2015-02-01

    The rumen ciliate Eremoplastron dilobum was isolated from sheep rumen fluid and cultivated in vitro as a species population. Four different salt solutions were used to prepare the culture media. However, only the "Artificial rumen fluid" composed of (g/L): K2HPO4-3.48, NaHCO3-2.1, NaCl-0.76, CaCl2×6H2O-0.33, CH3COONa-6.12, MgCl2×6H2O-0.3, Na2HPO4-1.71, NaHPO4×H2O-1.01 and distilled water enabled cultivation of this species for over 56 weeks. The protozoa were able to grow in a medium consisting of culture salt solution and powdered meadow hay (0.6mg/ml per d). The addition of wheat gluten did not increase the population density of E. dilobum whereas the supplemented crystalline cellulose and/or barley flour improved the growth of ciliates (Pdensity of the ciliate population. The recommended food consisted of meadow hay, wheat gluten, crystalline cellulose and barley flour when supplied in the proportions of 0.6, 0.16, 0.12 and 0.12mg/mL per day. We observed morphological variation of the ciliates, involving partial or complete reduction of the caudal lobes. PMID:25660229

  5. Modeling the distribution of ciliate protozoa in the reticulo-rumen using linear programming

    NARCIS (Netherlands)

    Hook, S.E.; Dijkstra, J.; Wright, A.G.; McBride, B.W.; France, J.

    2012-01-01

    The flow of ciliate protozoa from the reticulo-rumen is significantly less than expected given the total density of rumen protozoa present. To maintain their numbers in the reticulo-rumen, protozoa can be selectively retained through association with feed particles and the rumen wall. Few mathematic

  6. Complete Genome Sequence of the Intracellular Bacterial Symbiont TC1 in the Anaerobic Ciliate Trimyema compressum.

    Science.gov (United States)

    Shinzato, Naoya; Aoyama, Hiroaki; Saitoh, Seikoh; Nikoh, Naruo; Nakano, Kazuma; Shimoji, Makiko; Shinzato, Misuzu; Satou, Kazuhito; Teruya, Kuniko; Hirano, Takashi; Yamada, Takanori; Nobu, Masaru K; Tamaki, Hideyuki; Shirai, Yumi; Park, Sanghwa; Narihiro, Takashi; Liu, Wen-Tso; Kamagata, Yoichi

    2016-01-01

    A free-living ciliate, Trimyema compressum, found in anoxic freshwater environments harbors methanogenic archaea and a bacterial symbiont named TC1 in its cytoplasm. Here, we report the complete genome sequence of the TC1 symbiont, consisting of a 1.59-Mb chromosome and a 35.8-kb plasmid, which was determined using the PacBio RSII sequencer. PMID:27660797

  7. Bose-Einstein condensates form in heuristics learned by ciliates deciding to signal 'social' commitments.

    Science.gov (United States)

    Clark, Kevin B

    2010-03-01

    Fringe quantum biology theories often adopt the concept of Bose-Einstein condensation when explaining how consciousness, emotion, perception, learning, and reasoning emerge from operations of intact animal nervous systems and other computational media. However, controversial empirical evidence and mathematical formalism concerning decoherence rates of bioprocesses keep these frameworks from satisfactorily accounting for the physical nature of cognitive-like events. This study, inspired by the discovery that preferential attachment rules computed by complex technological networks obey Bose-Einstein statistics, is the first rigorous attempt to examine whether analogues of Bose-Einstein condensation precipitate learned decision making in live biological systems as bioenergetics optimization predicts. By exploiting the ciliate Spirostomum ambiguum's capacity to learn and store behavioral strategies advertising mating availability into heuristics of topologically invariant computational networks, three distinct phases of strategy use were found to map onto statistical distributions described by Bose-Einstein, Fermi-Dirac, and classical Maxwell-Boltzmann behavior. Ciliates that sensitized or habituated signaling patterns to emit brief periods of either deceptive 'harder-to-get' or altruistic 'easier-to-get' serial escape reactions began testing condensed on initially perceived fittest 'courting' solutions. When these ciliates switched from their first strategy choices, Bose-Einstein condensation of strategy use abruptly dissipated into a Maxwell-Boltzmann computational phase no longer dominated by a single fittest strategy. Recursive trial-and-error strategy searches annealed strategy use back into a condensed phase consistent with performance optimization. 'Social' decisions performed by ciliates showing no nonassociative learning were largely governed by Fermi-Dirac statistics, resulting in degenerate distributions of strategy choices. These findings corroborate

  8. Bose-Einstein condensates form in heuristics learned by ciliates deciding to signal 'social' commitments.

    Science.gov (United States)

    Clark, Kevin B

    2010-03-01

    Fringe quantum biology theories often adopt the concept of Bose-Einstein condensation when explaining how consciousness, emotion, perception, learning, and reasoning emerge from operations of intact animal nervous systems and other computational media. However, controversial empirical evidence and mathematical formalism concerning decoherence rates of bioprocesses keep these frameworks from satisfactorily accounting for the physical nature of cognitive-like events. This study, inspired by the discovery that preferential attachment rules computed by complex technological networks obey Bose-Einstein statistics, is the first rigorous attempt to examine whether analogues of Bose-Einstein condensation precipitate learned decision making in live biological systems as bioenergetics optimization predicts. By exploiting the ciliate Spirostomum ambiguum's capacity to learn and store behavioral strategies advertising mating availability into heuristics of topologically invariant computational networks, three distinct phases of strategy use were found to map onto statistical distributions described by Bose-Einstein, Fermi-Dirac, and classical Maxwell-Boltzmann behavior. Ciliates that sensitized or habituated signaling patterns to emit brief periods of either deceptive 'harder-to-get' or altruistic 'easier-to-get' serial escape reactions began testing condensed on initially perceived fittest 'courting' solutions. When these ciliates switched from their first strategy choices, Bose-Einstein condensation of strategy use abruptly dissipated into a Maxwell-Boltzmann computational phase no longer dominated by a single fittest strategy. Recursive trial-and-error strategy searches annealed strategy use back into a condensed phase consistent with performance optimization. 'Social' decisions performed by ciliates showing no nonassociative learning were largely governed by Fermi-Dirac statistics, resulting in degenerate distributions of strategy choices. These findings corroborate

  9. Unusually abundant and large ciliate xenomas in oysters, Crassostrea virginica, from Great Bay, New Hampshire, USA.

    Science.gov (United States)

    McGurk, Emily Scarpa; Ford, Susan; Bushek, David

    2016-06-01

    During routine histological examination of oysters (Crassostrea virginica) from Great Bay, New Hampshire, USA, a high prevalence and intensity of ciliate xenomas has been noted since sampling began in 1997. Xenomas are hypertrophic lesions on the gills of bivalve molluscs caused by intracellular ciliates, likely Sphenophrya sp. Although not known to cause mortality in oysters, xenomas have not previously been reported at this high abundance. The objectives of this study were to characterize the xenomas, describe the ciliates, and gather baseline epizootiological data with correlations to environmental and biological parameters. Upon gross examination, xenomas appeared as white nodules, up to 3mm in diameter, located in the gill tissue and occasionally fusing into large masses along the gill filaments. Light microscopy of histological sections revealed xenomas located in the gill water tubes, which they often completely blocked. Higher magnification revealed dual nuclei, eight kineties, and conjugation of the ciliates. Transmission electron microscopy revealed dual nuclei that varied in density, a maximum of twenty cilia in each kinety radiating from the oral apparatus to the posterior, and a 9+2 axoneme structure within the cilia. These traits place the ciliates into the Order Rhynchodida, but insufficient molecular data exist to confirm classification of this ciliate to the Genus Sphenophrya. Since 1997, xenoma prevalence has fluctuated with peaks in 2000, 2004, and 2011. Infected oysters generally contained 100, sharply contrasting the rare prevalence and low intensity reported elsewhere. Prevalence increased with oyster size, leveling off near 50% in oysters >60mm. Infection intensity peaked in 70-90mm oysters and declined in larger oysters. Individual oyster condition was not associated with xenoma intensity, but sites with oysters in higher condition generally had a greater prevalence and intensity of xenoma infections. Seasonal data indicated an infection

  10. Marine ciliate community in relation to eutrophication of coastal waters in the Yellow Sea

    Institute of Scientific and Technical Information of China (English)

    XU Kuidong; CHOI Joong Ki; LEI Yanli; YANG Eun Jin

    2011-01-01

    We assessed the potential of marine ciliate community as an indicator to coastal water quality using water samples collected from four stations in the Yellow Sea in the summer 2000. The four stations were characterized by different levels of pollution. The ciliate communities consisted primarily of tintinnids and aloricate ciliates that were <30 μm. A total of 78 species were classified: 55 species at Station 2, 51 species each at Stations 1 and 4, and 47 species at Station 3. The mean number of species at each site was 29.2±2.0 (Station 1), 28.5±2.9 (Station 2), 27.8±1.7 (Station 3), and 24.5±2.3 (Station 4). The abundance was highly variable: 19 331±11 187 ind./L at Station 1, 7 960±5 639 ind./L at Station 2, 29 015± 12 999 ind./L at Station 3, and 8 190±4 658 ind./L at Station 4. Our results suggest that neither the simple chemical analysis (e.g. chemical oxygen demand, dissolved inorganic nitrogen, and phosphate) nor the eutrophication/pollution index adequately described the water quality at the four stations. The same was true of the number of species and their abundance, both of which had no correlation with the chemical indices. In contrast, Margalef's diversity index values (3.12 at Station 2, 2.89 at Station 1, and 2.64 at Stations 3 and 4) generally discriminated the water quality status of the four stations. The difference in water quality among the stations was strongly supported by the pattern of species richness (i.e. the total number of species) of ciliates at each station. Our evaluation was consistent with the results of long-term water quality monitoring at the four stations. With increasing eutrophication, we observed also a compositional and functional shift in the ciliate assemblages from algivorous oligotrich/choreotrich to nonselective-omnivorous gymnostomatids to bacterivorous-detrivorous scuticociliatids. Thus, ciliates may be used to indicate the coastal water quality status of a given site.

  11. Colonization of periphytic ciliated protozoa on an artificial substrate in mariculture waters with notes on responses to environmental factors

    Institute of Scientific and Technical Information of China (English)

    Jiqiu Li; Henglong Xu; Xiaofeng Lin; Weibo Song

    2009-01-01

    Colonization of periphytic ciliates and their usefulness for monitoring water quality were evaluated using the glass slide method in two enclosed mariculture ponds used to culture crab larva and in a natural seawater reservoir. The results revealed that (1) the ciliate species composition and colonizing process differed between the culturing ponds and the natural reservoir and (2) the dominant ciliate species showed a greater distribution in terms of both the abundance and the occurrence frequency. This study also demonstrated that structural parameters were strongly related to water conditions. For example, the abundance was positively associated with NO-3-N and soluble reactive phosphate (P < 0.05), whereas the species number, species diversity and evenness were negatively correlated with nutrients (e.g. NO-3N and NH3-N) and temperature (P < 0.05). These findings support the evidence that periphytic ciliates are useful bioindicators of water quality in enclosed mariculture ecosystems.

  12. Inter-annual ciliate distribution variation within the late stratification oxycline in a monomictic lake, Lake Alchichica (Mexico)

    OpenAIRE

    Ximena Sánchez Medina; Miroslav Macek; Fernando Bautista-Reyes; Andrea Perz; Patricia Bonilla Lemus; Mario Chávez Arteaga

    2016-01-01

    noxia, and ciliates might play a very important role in the plankton community budget there. We analysed changes in the composition and biomass of the ciliate assemblage and other microbial loop components throughout the oxycline just at the end of stratification in a warm-monomictic lake, Lake Alchichica, Mexico (four samplings: 2006-2008, 2010); the results were compared with those obtained from another lake from the region, La Preciosa, sampled in 2010. Bacteria, autotrophic picoplankton (...

  13. Preferential Feeding by the Ciliates Chilodonella and Tetrahymena spp. and Effects of These Protozoa on Bacterial Biofilm Structure and Composition▿

    OpenAIRE

    Dopheide, Andrew; Lear, Gavin; Stott, Rebecca; Lewis, Gillian

    2011-01-01

    Protozoa are important components of microbial food webs, but protozoan feeding preferences and their effects in the context of bacterial biofilms are not well understood. The feeding interactions of two contrasting ciliates, the free-swimming filter feeder Tetrahymena sp. and the surface-associated predator Chilodonella sp., were investigated using biofilm-forming bacteria genetically modified to express fluorescent proteins. According to microscopy, both ciliates readily consumed cells from...

  14. Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment

    Directory of Open Access Journals (Sweden)

    Takenaka Akio

    2006-02-01

    Full Text Available Abstract Background The horizontal transfer of expressed genes from Bacteria into Ciliates which live in close contact with each other in the rumen (the foregut of ruminants was studied using ciliate Expressed Sequence Tags (ESTs. More than 4000 ESTs were sequenced from representatives of the two major groups of rumen Cilates: the order Entodiniomorphida (Entodinium simplex, Entodinium caudatum, Eudiplodinium maggii, Metadinium medium, Diploplastron affine, Polyplastron multivesiculatum and Epidinium ecaudatum and the order Vestibuliferida, previously called Holotricha (Isotricha prostoma, Isotricha intestinalis and Dasytricha ruminantium. Results A comparison of the sequences with the completely sequenced genomes of Eukaryotes and Prokaryotes, followed by large-scale construction and analysis of phylogenies, identified 148 ciliate genes that specifically cluster with genes from the Bacteria and Archaea. The phylogenetic clustering with bacterial genes, coupled with the absence of close relatives of these genes in the Ciliate Tetrahymena thermophila, indicates that they have been acquired via Horizontal Gene Transfer (HGT after the colonization of the gut by the rumen Ciliates. Conclusion Among the HGT candidates, we found an over-representation (>75% of genes involved in metabolism, specifically in the catabolism of complex carbohydrates, a rich food source in the rumen. We propose that the acquisition of these genes has greatly facilitated the Ciliates' colonization of the rumen providing evidence for the role of HGT in the adaptation to new niches.

  15. Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment

    Science.gov (United States)

    Ricard, Guénola; McEwan, Neil R; Dutilh, Bas E; Jouany, Jean-Pierre; Macheboeuf, Didier; Mitsumori, Makoto; McIntosh, Freda M; Michalowski, Tadeusz; Nagamine, Takafumi; Nelson, Nancy; Newbold, Charles J; Nsabimana, Eli; Takenaka, Akio; Thomas, Nadine A; Ushida, Kazunari; Hackstein, Johannes HP; Huynen, Martijn A

    2006-01-01

    Background The horizontal transfer of expressed genes from Bacteria into Ciliates which live in close contact with each other in the rumen (the foregut of ruminants) was studied using ciliate Expressed Sequence Tags (ESTs). More than 4000 ESTs were sequenced from representatives of the two major groups of rumen Cilates: the order Entodiniomorphida (Entodinium simplex, Entodinium caudatum, Eudiplodinium maggii, Metadinium medium, Diploplastron affine, Polyplastron multivesiculatum and Epidinium ecaudatum) and the order Vestibuliferida, previously called Holotricha (Isotricha prostoma, Isotricha intestinalis and Dasytricha ruminantium). Results A comparison of the sequences with the completely sequenced genomes of Eukaryotes and Prokaryotes, followed by large-scale construction and analysis of phylogenies, identified 148 ciliate genes that specifically cluster with genes from the Bacteria and Archaea. The phylogenetic clustering with bacterial genes, coupled with the absence of close relatives of these genes in the Ciliate Tetrahymena thermophila, indicates that they have been acquired via Horizontal Gene Transfer (HGT) after the colonization of the gut by the rumen Ciliates. Conclusion Among the HGT candidates, we found an over-representation (>75%) of genes involved in metabolism, specifically in the catabolism of complex carbohydrates, a rich food source in the rumen. We propose that the acquisition of these genes has greatly facilitated the Ciliates' colonization of the rumen providing evidence for the role of HGT in the adaptation to new niches. PMID:16472398

  16. CT findings of ciliated hepatic foregut cyst mimicking metastasis: a case report

    Energy Technology Data Exchange (ETDEWEB)

    Kwak, Hyo Sung; Lee, Jeong Min; Kim, In Hwan [Chonbuk National University Hospital, Chonju (Korea, Republic of); Moon, Woo Sung [Medical School, Chonbuk National University, Chonju (Korea, Republic of)

    2000-07-01

    Ciliated hepatic foregut cyst (CHFC) is a rare benign lesion consisting of ciliated pseudostratified columnar epithelium, loose subepithelium, loose subepithelial connective tissue, a smooth muscle layer, and an outer fibrous capsule. we encountered a patient with retroperitoneal and posterior mediastinal neurilemmoma and additional CHFC mimicking metastasis. Abdominal CT examination demonstrated that the posterior mediastinal and retroperitoneal lesions were lobulated, well-defined tumors with aneural foraminal extension that were pathologically confirmed as neurilemmomas. Unenhanced CT indicated that the additional lesion was a slightly hypodense mass relative to surrounding parenchyma at the medial segment of the left lobe of the liver, and after the IV administration of contrast material, the lesion did not show enhancement. (author)

  17. An overview of Suctorian ciliates (Ciliophora, Suctorea) as epibionts of halacarid mites (Acari, Halacaridae)

    Digital Repository Service at National Institute of Oceanography (India)

    Dovgal, I.; Chatterjee, T.; Ingole, B.S.

    . Permanent slides of infested halacarids were deposited in the collections of the Department of Fauna and Systematics of invertebrate animals of Schmalhausen Institute of Zoology, National Academy of Sciences, Ukraine. Results and discussion The systematic..., Lim. ceter and T. calix, can be found on different benthic invertebrate animals. All of the above men- tioned ciliate species are found on marine or brackish water hosts. Acineta sulcata can also inhabit freshwater i f t h e i r...

  18. Propulsion of swimming microrobots inspired by metachronal waves in ciliates: from biology to material specifications

    OpenAIRE

    Palagi, Stefano; Jager, Edwin; Mazzolai, Barbara; Beccai, Lucia

    2013-01-01

    The quest for swimming microrobots originates from possible applications in medicine, especially involving navigation in bodily fluids. Swimming microorganisms have become a source of inspiration because their propulsion mechanisms are effective in the low-Reynolds number regime. In this study, we address a propulsion mechanism inspired by metachronal waves, i.e. the spontaneous coordination of cilia leading to the fast swimming of ciliates. We analyse the biological mechanism (referring to i...

  19. Ciliates learn to diagnose and correct classical error syndromes in mating strategies

    Directory of Open Access Journals (Sweden)

    Kevin Bradley Clark

    2013-08-01

    Full Text Available Preconjugal ciliates learn classical repetition error-correction codes to safeguard mating messages and replies from corruption by rivals and local ambient noise. Because individual cells behave as memory channels with Szilárd engine attributes, these coding schemes also might be used to limit, diagnose, and correct mating-signal errors due to noisy intracellular information processing. The present study, therefore, assessed whether heterotrich ciliates effect fault-tolerant signal planning and execution by modifying engine performance, and consequently entropy content of codes, during mock cell-cell communication. Socially meaningful serial vibrations emitted from an ambiguous artificial source initiated ciliate behavioral signaling performances known to advertise mating fitness with varying courtship strategies. Microbes, employing calcium-dependent Hebbian-like decision making, learned to diagnose then correct error syndromes by recursively matching Boltzmann entropies between signal planning and execution stages via power or refrigeration cycles. All eight serial contraction and reversal strategies incurred errors in entropy magnitude by the execution stage of processing. Absolute errors, however, subtended expected threshold values for single bit-flip errors in three-bit replies, indicating coding schemes protected information content throughout signal production. Ciliate preparedness for vibrations selectively and significantly affected the magnitude and valence of Szilárd engine performance during modal and nonmodal strategy corrective cycles. But entropy fidelity for all replies mainly improved across learning trials as refinements in engine efficiency. Fidelity neared maximum levels for only modal signals coded in resilient three-bit repetition error-correction sequences. Together, these findings demonstrate microbes can elevate survival/reproductive success by learning to implement classical fault-tolerant information processing in

  20. A Rab-based view of membrane traffic in the ciliate Tetrahymena thermophila

    OpenAIRE

    Turkewitz, Aaron P.; Bright, Lydia J

    2011-01-01

    Biologists have long recognized that some single-celled organisms show striking morphological and behavioral complexity, and details of the genetic underpinnings can be mined from the trove of newly-sequenced genomes. Ciliates, among which Tetrahymena thermophila and Paramecium tetraurelia have received most attention, provide clear examples of a lineage in which, as in animal cells, the core pathways of membrane traffic have undergone dramatic expansion and elaboration to facilitate multiple...

  1. Taxonomic list of ciliated protist (Protozoa: Ciliophora) in Cojimar river, Havana, Cuba

    OpenAIRE

    Isabel de la Caridad Ymas González; Dania Prieto Trueba

    2012-01-01

    The taxonomic composition of ciliated protozoan’s communities from Cojimar river (Havana city) was determinated, over the study period. Samples were collected from six stations located along the river. The samples were cultured in Petri dishes and were main-tained in environmental temperature and natural ilumination. Species identification was made taking into account morphological characters and Levine’s et al.(1980) taxonomic classification was used. It were identified 49 sp...

  2. Morphological Studies on the Infraciliature of a Planktonic Ciliate, Tintinnopsis brasiliensis (Ciliophora: Tintinina)

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    A poorly-described marine planktonic ciliate, Tintinnopsis brasiliensis Kofoid & Campbell, 1929, collected from the Taiping Cape of Qingdao, China, was morphologically investigated based on permanent preparation after protargol impregnation and was compared with other related congeners. According to the infraciliature, three ciliary groups can be recognized, which reveals a very stable structure among specimens and denotes that the pattern of infraciliature is, apart from the features of the lorica, a highly reliable criterion for species identification.

  3. Ciliates and the rare biosphere-community ecology and population dynamics.

    Science.gov (United States)

    Weisse, Thomas

    2014-01-01

    Application of deep sequencing technologies to environmental samples and some detailed morphological studies suggest that there is a vast, yet unexplored rare ciliate biosphere, tentatively defined in terms of operational taxonomic units. However, very few studies complemented molecular and phylogenetic data with morphological and ecological descriptions of the species inventory. This is mainly because the sampling effort increases strongly with decreasing species abundance. In spite of this limited knowledge, it is clear that species that are rare under certain environmental conditions (temporal rare biosphere) may become abundant when the physical, chemical, and biological variables of their habitat change. Furthermore, some species may always be present in low numbers if their dispersal rates are exceedingly high (accidental rare biosphere). An intriguing question is whether there are some species that are always rare, i.e., in every suitable environment. This permanent rare biosphere is conceptually different from the temporal rare biosphere. This review characterizes typical aquatic habitats of the rare ciliate biosphere, portrays different scenarios under which some or even many species may be permanently rare (background fauna), and identifies some fundamental questions that need to be addressed to achieve a better understanding of the population dynamics of the rare ciliate biosphere.

  4. Declines in both redundant and trace species characterize the latitudinal diversity gradient in tintinnid ciliates.

    Science.gov (United States)

    Dolan, John R; Yang, Eun Jin; Kang, Sung-Ho; Rhee, Tae Siek

    2016-09-01

    The latitudinal diversity gradient is a well-known biogeographic pattern. However, rarely considered is how a cline in species richness may be reflected in the characteristics of species assemblages. Fewer species may equal fewer distinct ecological types, or declines in redundancy (species functionally similar to one another) or fewer trace species, those occurring in very low concentrations. We focused on tintinnid ciliates of the microzooplankton in which the ciliate cell is housed inside a species-specific lorica or shell. The size of lorica oral aperture, the lorica oral diameter (LOD), is correlated with a preferred prey size and maximum growth rate. Consequently, species of a distinct LOD are distinct in key ecologic characteristics, whereas those of a similar LOD are functionally similar or redundant species. We sampled from East Sea/Sea of Japan to the High Arctic Sea. We determined abundance distributions of biological species and also ecological types by grouping species in LOD size-classes, sets of ecologically similar species. In lower latitudes there are more trace species, more size-classes and the dominant species are accompanied by many apparently ecologically similar species, presumably able to replace the dominant species, at least with regard to the size of prey exploited. Such redundancy appears to decline markedly with latitude in assemblages of tintinnid ciliates. Furthermore, the relatively small species pools of the northern high latitude assemblages suggest a low capacity to adapt to changing conditions. PMID:26990873

  5. Effect of adrenergic stimulation on clearance from small ciliated airways in healthy subjects.

    Science.gov (United States)

    Svartengren, K; Philipson, K; Svartengren, M; Camner, P

    1998-01-01

    Mucociliary transport is an important clearance mechanism of larger airways, but in the smallest ciliated airways (bronchioles) it may be less effective. The present study aimed at investigating whether clearance from the bronchioles in subjects with healthy airways was stimulated by an adrenergic agonist (terbutaline sulphate). Tracheobronchial clearance was studied twice in 10 healthy subjects after inhalation of 6-micron (aerodynamic diameter) monodisperse Teflon particles labeled with 111In. At one exposure, oral treatment with terbutaline sulphate, known to stimulate clearance in large airways, began immediately after inhalation of the particles. The other exposure was a control measurement. The particles were inhaled at an extremely slow flow, 0.05 L/s, which gave deposition mainly in the small ciliated airways (bronchioles). Lung retention was measured at 0, 24, 48, and 72 h. Clearance was significant every 24 h for both exposures (p terbutaline sulphate, the subjects' pulse rates tended to be higher, but clearance rates did not increase. We found, as expected, no significant correlation between lung retention and lung function in either exposure. This study shows that an adrenergic agonist does not significantly influence overall clearance from the bronchiolar region in healthy subjects. This suggests that mucociliary transport does not significantly contribute to clearance from the smallest ciliated airways. Other mechanisms may be more important for the transportation of mucus from these airways. PMID:9555573

  6. Novel insights into the genetic diversity of Balantidium and Balantidium-like cyst-forming ciliates

    OpenAIRE

    Kateřina Pomajbíková; Miroslav Oborník; Aleš Horák; Petrželková, Klára J.; J Norman Grim; Bruno Levecke; Angelique Todd; Martin Mulama; John Kiyang; David Modrý

    2013-01-01

    Balantidiasis is considered a neglected zoonotic disease with pigs serving as reservoir hosts. However, Balantidium coli has been recorded in many other mammalian species, including primates. Here, we evaluated the genetic diversity of B. coli in non-human primates using two gene markers (SSrDNA and ITS1-5.8SDNA-ITS2). We analyzed 49 isolates of ciliates from fecal samples originating from 11 species of captive and wild primates, domestic pigs and wild boar. The phylogenetic trees were compu...

  7. Using Sorting by Reversal: Breakpoint Graph for Gene Assembly in Ciliates

    Science.gov (United States)

    Brijder, Robert; Jan Hoogeboom, Hendrik

    2007-09-01

    The theory of gene assembly in ciliates has much in common with the theory of sorting by reversal. Both model processes that are based on splicing, and have a fixed begin and end product. The main difference is the type of splicing operations used to obtain the end product from the begin product. In this overview paper we show that the concept of breakpoint graph, known from the theory of sorting by reversal, has many uses in the theory of gene assembly. Our aim is to present the material in an intuitive and informal manner to allow for an efficient introduction into the subject.

  8. ON THE MARINE CILIATE, Pseudocohnilembus hargisi (PROTOZOA,CILIOPHORA, SCUTICOCILIATIDA) WITH COMPARISON OF ITS RELATED SPECIES

    Institute of Scientific and Technical Information of China (English)

    龚骏; 马宏伟; 宋微波

    2002-01-01

    The living morphology, nuclear apparatus, infraciliature and silverline system o f the poorly-known ciliate Pseudocohnilembus hargisi Evans & Thompson, 1964 , collected from a shrimp culture pond in Qingdao, China, were examined by obser vation of the live specimen; and by the pyridinated carbonate method and Chatton -Lwoff technique. The main characteristics: 13-14 (usually 13) longitudinal or slightly spirally arranged somatic kineties; single contractile vacuole with usually 2 ( 1-2) pores at posterior ends of the fourth and fifth somatic kineties to the rig ht of the buccal cavity. Several related congeners were compared and morphometri cally tabulated.

  9. Ciliate protozoa in the rumen of Kafue lechwe, Kobus leche kafuensis, in Zambia, with the description of four new species.

    Science.gov (United States)

    Imai, S; Tsutsumi, Y; Yumura, S; Mulenga, A

    1992-01-01

    The composition of the rumen ciliate fauna in 76 Kafue lechwe inhabiting a limited area in Zambia was surveyed and five genera containing 24 species with 16 formae belonging to the family Ophryoscolecidae were identified. Four new species belonging to Diplodiniinae were recognized and described as Diplodinium lochinvarense n. sp., Diplodinium leche n. sp., Diplodinium zambiense n. sp., and Metadinium ossiculi n. sp. In addition, Ostracodinium gracile form fissilaminatum Dogiel, 1932 was found for the second time and described as Metadinium fissilaminatum n. comb. The species composition was fairly unusual. Seven of the species have been found only in African wild antelopes and these species were found more frequently than cosmopolitan species. There was no evidence of isotrichid species. The average density of ciliates per 1 ml of the rumen fluid was 25.7 x 10(4), and the number of ciliate species per head of host was 10.8.

  10. Water absorbance features of mucilage on the seeds of a desert ephemeral plant, Plantago minuta Pall., and its role in germination of the seeds under drought stress%小车前(Plantago minuta Pall.)种子表面粘液物质的吸水特性及其对种子在干旱环境中萌发的影响

    Institute of Scientific and Technical Information of China (English)

    伍晨曦; 孙羽; 冯固

    2009-01-01

    为了理解荒漠短命植物小车前(Plantago minuta Pall.)种子表面的粘液物质对种子在干旱环境中萌发的作用,在室内控制条件下研究了粘液物质的吸水保水特性、剥离粘液物质的种子(无粘液种子)和保留粘液物质的种子(粘液种子)在-1.15~-0.15 MPa不同渗透胁迫条件下的萌发状况.结果表明: (1)小车前种子表面的粘液物质干重占粘液种子干重的5.6%;在去离子水中,粘液物质可以吸收相当于其自身干重217.1倍的水分;粘液物质的存在使得小车前种子的吸水倍数由2倍增加至14倍,从而保证为种子萌发提供充足的水分;(2)干燥的粘液种子吸水2h后即达到饱和,而吸水饱和后的粘液种子在室温下晾置,经过48h后又干燥失水恢复至原重;(3)在去离子水中或低渗透胁迫(-0.33~-0.15 MPa) 条件下,粘液物质吸水作用能促进小车前种子萌发,粘液种子3d的发芽势和10d的总萌发率均显著高于无粘液种子;在高渗透胁迫(-1.15~-0.73MPa)条件下,粘液种子3d的发芽势显著低于无粘液种子的,而10d的总萌发率与无粘液种子的没有显著差别,表明粘液物质在干旱条件下可能从种子而非外界环境中吸取水分,减缓了种子萌发速率.通过上述结果可以认为小车前种子表面的粘液物质在早春干湿交替剧烈的荒漠生境中起到通过调节水分来调节种子萌发的作用,这种萌发策略大大降低了因大批种子同时萌发导致幼苗受旱甚至种群灭亡的潜在风险.

  11. Several RNase T2 enzymes function in induced tRNA and rRNA turnover in the ciliate Tetrahymena

    DEFF Research Database (Denmark)

    Andersen, Kasper Langebjerg; Collins, Kathleen

    2012-01-01

    RNase T2 enzymes are produced by a wide range of organisms and have been implicated to function in diverse cellular processes, including stress-induced anticodon loop cleavage of mature tRNAs to generate tRNA halves. Here we describe a family of eight RNase T2 genes (RNT2A-RNT2H) in the ciliate....... These results, the delineation of a broadened range of conditions that induce the accumulation of tRNA halves, and the demonstration of a predominantly ribonucleoprotein-free state of tRNA halves in cell extract suggest that ciliate tRNA halves are degradation intermediates in an autophagy pathway induced...

  12. Phosphorus, nitrogen and chlorophyll-a are significant factors controlling ciliate communities in summer in the northern Beibu Gulf, South China Sea.

    Science.gov (United States)

    Wang, Yibo; Zhang, Wenjing; Lin, Yuanshao; Cao, Wenqing; Zheng, Lianming; Yang, Jun

    2014-01-01

    Ciliates (protozoa) are ubiquitous components of plankton community and play important roles in aquatic ecosystems in regards of their abundance, biomass, diversity and energy turnover. Based on the stratified samples collected from the northern Beibu Gulf in August 2011, species composition, abundance, biomass, diversity and spatial pattern of planktonic ciliates were studied. Furthermore the main environmental factors controlling ciliate communities were determined. A total of 101 species belonging to 44 genera and 7 orders (i.e., Oligotrichida, Haptorida, Euplotida, Sessilida, Pleurostomatida, Scuticociliatida and Tintinnida) were identified. The variation of ciliate communities was significant at horizontal level, but that was not at vertical level. Based on cluster analysis, ciliate communities were divided into three main groups. Redundancy analysis (RDA) revealed that Group A, existing in the waters with higher concentration of phosphorus and nitrogen, was dominated by Tintinnidium primitivum. Group B in the waters with lower temperature and chlorophyll-a concentration, was dominated by Leegaardiella ovalis. Group C, existing in the waters with higher temperature and chlorophyll-a concentration, was dominated by large Strombidium spp. and Mesodinium rubrum. Combining multiple analytic methods, our results strongly supported that phosphorus, nitrogen and chlorophyll-a were the most significant factors affecting the ciliate communities in the northern Beibu Gulf in summer. Concentration of phosphorus and nitrogen primarily influenced ciliate biomass, implying a potential impact of eutrophication on ciliate growth. The correlation with chlorophyll-a concentration, on one hand indicate the response of ciliates to the food availability, and on the other hand, the ciliates containing chloroplasts or endosymbionts may contribute greatly to the chlorophyll-a.

  13. Novel insights into the genetic diversity of Balantidium and Balantidium-like cyst-forming ciliates.

    Directory of Open Access Journals (Sweden)

    Kateřina Pomajbíková

    Full Text Available Balantidiasis is considered a neglected zoonotic disease with pigs serving as reservoir hosts. However, Balantidium coli has been recorded in many other mammalian species, including primates. Here, we evaluated the genetic diversity of B. coli in non-human primates using two gene markers (SSrDNA and ITS1-5.8SDNA-ITS2. We analyzed 49 isolates of ciliates from fecal samples originating from 11 species of captive and wild primates, domestic pigs and wild boar. The phylogenetic trees were computed using Bayesian inference and Maximum likelihood. Balantidium entozoon from edible frog and Buxtonella sulcata from cattle were included in the analyses as the closest relatives of B. coli, as well as reference sequences of vestibuliferids. The SSrDNA tree showed the same phylogenetic diversification of B. coli at genus level as the tree constructed based on the ITS region. Based on the polymorphism of SSrDNA sequences, the type species of the genus, namely B. entozoon, appeared to be phylogenetically distinct from B. coli. Thus, we propose a new genus Neobalantidium for the homeothermic clade. Moreover, several isolates from both captive and wild primates (excluding great apes clustered with B. sulcata with high support, suggesting the existence of a new species within this genus. The cysts of Buxtonella and Neobalantidium are morphologically indistinguishable and the presence of Buxtonella-like ciliates in primates opens the question about possible occurrence of these pathogens in humans.

  14. Novel insights into the genetic diversity of Balantidium and Balantidium-like cyst-forming ciliates.

    Science.gov (United States)

    Pomajbíková, Kateřina; Oborník, Miroslav; Horák, Aleš; Petrželková, Klára J; Grim, J Norman; Levecke, Bruno; Todd, Angelique; Mulama, Martin; Kiyang, John; Modrý, David

    2013-01-01

    Balantidiasis is considered a neglected zoonotic disease with pigs serving as reservoir hosts. However, Balantidium coli has been recorded in many other mammalian species, including primates. Here, we evaluated the genetic diversity of B. coli in non-human primates using two gene markers (SSrDNA and ITS1-5.8SDNA-ITS2). We analyzed 49 isolates of ciliates from fecal samples originating from 11 species of captive and wild primates, domestic pigs and wild boar. The phylogenetic trees were computed using Bayesian inference and Maximum likelihood. Balantidium entozoon from edible frog and Buxtonella sulcata from cattle were included in the analyses as the closest relatives of B. coli, as well as reference sequences of vestibuliferids. The SSrDNA tree showed the same phylogenetic diversification of B. coli at genus level as the tree constructed based on the ITS region. Based on the polymorphism of SSrDNA sequences, the type species of the genus, namely B. entozoon, appeared to be phylogenetically distinct from B. coli. Thus, we propose a new genus Neobalantidium for the homeothermic clade. Moreover, several isolates from both captive and wild primates (excluding great apes) clustered with B. sulcata with high support, suggesting the existence of a new species within this genus. The cysts of Buxtonella and Neobalantidium are morphologically indistinguishable and the presence of Buxtonella-like ciliates in primates opens the question about possible occurrence of these pathogens in humans. PMID:23556024

  15. Evaluation of Enrichment Protocols for Bacterial Endosymbionts of Ciliates by Real-Time PCR.

    Science.gov (United States)

    Castelli, Michele; Lanzoni, Olivia; Rossi, Leonardo; Potekhin, Alexey; Schrallhammer, Martina; Petroni, Giulio

    2016-06-01

    Large-scale studies on obligate bacterial endosymbionts may frequently require preliminary purification and enrichment protocols, which are often elaborate to set up and to evaluate, especially if the host organism is a protist. The purpose of this study was to develop a real-time PCR-based strategy and employ it for assessing two of such enrichment protocols for Holospora caryophila, hosted by the ciliate Paramecium. Four SSU rRNA gene-targeted real-time PCR assays were designed, which allowed to compare the amount of H. caryophila to other organisms, namely the host, its food bacterium (Raoultella planticola), and free-living bacteria present in the culture medium. By the use of the real-time PCR assays in combination, it was possible to conclude that the "cell fractionation" protocol was quite successful in the enrichment of the symbiont, while the "Percoll gradient" protocol will need further refinements to be fully repeatable. The proposed approach has the potential to facilitate and encourage future studies on the yet underexplored field of bacterial endosymbionts of ciliates and other protists. It can also find valuable applications for experimental questions other than those tested, such as fast and precise assessment of symbiont abundance in natural populations and comparison among multiple coexisting symbionts. PMID:26894821

  16. ATP4 and ciliation in the neuroectoderm and endoderm of Xenopus embryos and tadpoles

    Directory of Open Access Journals (Sweden)

    Peter Walentek

    2015-09-01

    Full Text Available During gastrulation and neurulation, foxj1 expression requires ATP4a-dependent Wnt/β-catenin signaling for ciliation of the gastrocoel roof plate (Walentek et al. Cell Rep. 1 (2012 516–527. and the mucociliary epidermis (Walentek et al. Dev. Biol. (2015 of Xenopus laevis embryos. These data suggested that ATP4a and Wnt/β-catenin signaling regulate foxj1 throughout Xenopus development. Here we analyzed whether foxj1 expression was also ATP4a-dependent in other ciliated tissues of the developing Xenopus embryo and tadpole. We found that in the floor plate of the neural tube ATP4a-dependent canonical Wnt signaling was required for foxj1 expression, downstream of or in parallel to Hedgehog signaling. In the developing tadpole brain, ATP4-function was a prerequisite for the establishment of cerebrospinal fluid flow. Furthermore, we describe foxj1 expression and the presence of multiciliated cells in the developing tadpole gastrointestinal tract. Our work argues for a general requirement of ATP4-dependent Wnt/β-catenin signaling for foxj1 expression and motile ciliogenesis throughout Xenopus development.

  17. Factors involved in the distribution pattern of ciliates in the water column of a transparent alpine lake

    OpenAIRE

    SONNTAG, BETTINA; Summerer, Monika; Sommaruga, Ruben

    2011-01-01

    Abstract The recurrent depth preference of three ciliate species (two prostomatids and one haptorid) in a transparent alpine lake indicates the existence of niche partitioning among them involving potential factors such as avoidance of high UVR levels and zooplankton predation, as well as competition for food resources. (Sonntag, Bettina) (Summerer, Monika) (Sommaruga, Ruben) University...

  18. Composition and distribution of planktonic ciliates in the southern South China Sea during late summer: Comparison between surface and 75 m deep layer

    Science.gov (United States)

    Liu, Huaxue; Shen, Pingping; Li, Chunhou; Chen, Zuozhi; Qi, Zhanhui; Huang, Honghui

    2016-02-01

    Ciliates are very important components in most marine ecosystem. They are trophic link between the microbial food web and grazing food chain. In this study, ciliates were collected from 11 sites in the southern South China Sea (SCS) during August 25 to September 28, 2011. Their composition and distribution at the surface and 75 m deep depth of the ocean were studied. A total of 30 species belonging to 22 genera were identified, and 22 species of 15 genera were Tintinnids. Eutintinnus fraknoii and E. stramentus were the most common species. The other dominants were strombidiids ciliates including Strombidium conicum and S. globosaneum, which were followed by the tide form, Mesodinium pulex. Ciliates abundance ranged from 46 ind L-1 to 368 ind L-1 in the open sites, 46-368 ind L-1 at surface and 73-198 ind L-1 at 75 m deep layer. In the Yongshu reef, ciliates abundance ranged from 167 ind L-1 to 365 ind L-1 in the water column, similar to that in Sanya coral reef waters. Ciliates composition showed obvious difference between surface and 75 m deep layer at station S2 ( P deep layer, salinity was negatively related to mixed layer depth ( P < 0.05), but positively to chlorophyll a concentration ( P < 0.05), indicating that the change of vertical mixing in water column influenced vertical distribution of ciliates in the southern SCS.

  19. Tolerance of ciliated protozoan Paramecium bursaria (Protozoa,Ciliophora) to ammonia and nitrites

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    The tolerance to ammonia and nitrites in freshwater ciliate Paramecium bursaria was measured in a conventional open system. The ciliate was exposed to different concentrations of ammonia and nitrites for 2h and 12h in order to determine the lethal concentrations. Linear regression analysis revealed that the 2h-LC50 value for ammonia was 95.94 mg/L and for nitrite 27.35 mg/L using probit scale method (with 95% confidence intervals). There was a linear correlation between the mortality probit scale and logarithmic concentration of ammonia which fit by a regression equation y=7.32x-9.51 (R2=0.98; y, mortality probit scale; x, logarithmic concentration of ammonia), by which 2 h-LC50 value for ammonia was fotnd to be 95.50 mg/L. A linear correlation between mortality probit scales and logarithmic concentration of nitrite is also followed the regression equation y=2.86x+0.89 (R2=0.95; y, mortality probit scale; x, logarithmic concentration of nitrite). The regression analysis of toxicity curves showed that the linear correlation between exposed time of ammonia-N LC50 value and ammonia-N LC50 value followed the regression equation y=2862.85e-0.0ax (R2=0.95; y, duration of exposure to LC50 value; x, LC50 value), and that between exposed time of nitrite-N LC50 value and nitrite-N LC50 value followed the regression equation y = 127.15e-0.13x (R2=0.91; y, exposed time of LC50 value; x, LC50 value). The results demonstrate that the tolerance to ammonia in P. bursaria is considerably higher than that of the larvae or juveniles of some metozoa, e.g. cultured prawns and oysters. In addition, ciliates, as bacterial predators, are likely to play a positive role in maintaining and improving water quality in aquatic environments with high-level ammonium, such as sewage treatment systems.

  20. Tolerance of ciliated protozoan Paramecium bursaria (Protozoa, Ciliophora) to ammonia and nitrites

    Science.gov (United States)

    Xu, Henglong; Song, Weibo; Lu, Lu; Alan, Warren

    2005-09-01

    The tolerance to ammonia and nitrites in freshwater ciliate Paramecium bursaria was measured in a conventional open system. The ciliate was exposed to different concentrations of ammonia and nitrites for 2h and 12h in order to determine the lethal concentrations. Linear regression analysis revealed that the 2h-LC50 value for ammonia was 95.94 mg/L and for nitrite 27.35 mg/L using probit scale method (with 95% confidence intervals). There was a linear correlation between the mortality probit scale and logarithmic concentration of ammonia which fit by a regression equation y=7.32 x 9.51 ( R 2=0.98; y, mortality probit scale; x, logarithmic concentration of ammonia), by which 2 h-LC50 value for ammonia was found to be 95.50 mg/L. A linear correlation between mortality probit scales and logarithmic concentration of nitrite is also followed the regression equation y=2.86 x+0.89 ( R 2=0.95; y, mortality probit scale; x, logarithmic concentration of nitrite). The regression analysis of toxicity curves showed that the linear correlation between exposed time of ammonia-N LC50 value and ammonia-N LC50 value followed the regression equation y=2 862.85 e -0.08 x ( R 2=0.95; y, duration of exposure to LC50 value; x, LC50 value), and that between exposed time of nitrite-N LC50 value and nitrite-N LC50 value followed the regression equation y=127.15 e -0.13 x ( R 2=0.91; y, exposed time of LC50 value; x, LC50 value). The results demonstrate that the tolerance to ammonia in P. bursaria is considerably higher than that of the larvae or juveniles of some metozoa, e.g. cultured prawns and oysters. In addition, ciliates, as bacterial predators, are likely to play a positive role in maintaining and improving water quality in aquatic environments with high-level ammonium, such as sewage treatment systems.

  1. A simplified experimental model for clearance of some pathogenic bacteria using common bacterivorous ciliated spp. in Tigris river

    Science.gov (United States)

    Ali, Talib Hassan; Saleh, Dhuha Saad

    2014-03-01

    Bacteria-specific uptake rates of three different protozoan taxa on a pure and mixed bacterial community was studied by means of a simplified and functionally reproducible experimental model. The bacterial species Shigella flexneri, Escherichia coli and Salmonella typhi were isolated and classified from stool samples of patients suffering from diarrhea. Paramecium caudatum, Tetrahymena pyriformis and Halteria grandinella, free living ciliate Protozoans, were isolated and identified from Tigris river water. Pure and mixed ( E. coli + S. typhi), ( E. coli + Sh. flexneri) bacterial cultures were used with each ciliate genera to evaluate the following: predator duplication rate, prey reduction rate, clearance rate and net grazing rate. We used selective lactose fermentation phenomena of enteric bacteria on MacConkey medium for the quantification of bacteria cultural characteristics. The final bacteria concentration was reduced by growing protozoa of 98-99.9 % compared to protozoa-free controls. It showed that Tetrahymena pyriformis had the highest duplication rate (4.13 time/day) in both types of cultures (pure and mixed), followed by Paramecium caudatum and Halteria grandinella, respectively. Paramecium caudatum had the highest rate of ingestion in both types of cultures (26 × 103 bacteria/organism/hr) and yielded the longest time required for 90 % bacterial reduction in a pure suspension of S. typhi (166 h). Clearance rates of pathogenic bacteria by ciliates ranged between 106 nanoliter/organism/h by P. caudatum to S. typhi and 1.92 nanoliter/organism/h seen in T. pyriformis in ( E. coli + S. typhi) mixed culture. We used aquatic experimental microcosms under controlled conditions to explore bacteria-dependent ciliate growth and examined whether these ciliates could discriminate between equally sized bacterial preys in a mixture.

  2. Influence of ciliated protozoa and heterotrophic nanoflagellates on the fate of primary production in the northeast Atlantic Ocean

    Science.gov (United States)

    Karayanni, Hera; Christaki, Urania; van Wambeke, France; Denis, Michel; Moutin, Thierry

    2005-07-01

    Heterotrophic nanoflagellates and ciliates and their herbivorous activity were studied within the framework of the Programme Océan Multidisciplinaire Méso Echelle (POMME) in the northeastern Atlantic between 16°-22°W and 38°-45°N during winter, spring, and late summer/autumn 2001. Ciliate ingestion rates of Synechococcus and eukaryotic algae were measured using fluorescently labeled prey. Heterotrophic nanoflagellate ingestion rates of Synechococcus and Prochlorococcus were also estimated. Heterotrophic nanoflagellate and ciliate standing stock within the surface layer (0-100 m) showed seasonal variation, with maximal values in spring (866 mg C m-2 and 637 mg C m-2, respectively). Oligotrichs dominated the ciliate assemblages, except at one site visited during spring, where a tintinnid bloom was observed. Ingestion of photosynthetic cells less than 10 μm in size was positively correlated (r = 0.7, p consumption reflected differences in the evolution of the phytoplankton bloom and in the structure of the microbial food web, both associated with the strong mesoscale hydrodynamic variability of the study area. In that context it is worthy to note that when tintinnids reached high abundances locally (1260 cells L-1), their impact as phytoplankton grazers was important and reached 69% of primary production. Generally, heterotrophic nanoflagellates and ciliates were relatively more important in determining the fate of phytogenic carbon during spring. Another interesting feature of primary production consumption was that during the autumn, when Prochlorococcus dominated the phytoplankton community, the protozoan grazing activity was ineffective in regulating the fate of primary producers.

  3. Ciliated Median Raphe Cyst of Perineum Presenting as Perianal Polyp: A Case Report with Immunohistochemical Study, Review of Literature, and Pathogenesis

    Directory of Open Access Journals (Sweden)

    Jayesh Sagar

    2006-01-01

    Full Text Available Median raphe cyst is a very rare, benign congenital lesion occurring mainly on the ventral aspect of the penis, but can develop anywhere in the midline between the external urethral meatus and anus. We report a case of median raphe cyst in the perineum presenting as a perianal polyp in a 65-year-old, English white male with exceptionally rare ciliated epithelium. According to our knowledge, this is the third such case of ciliated median raphe cyst in the English literature. This case, also the first case of ciliated median raphe cyst in the perineum location, focuses on pathogenesis of median raphe cyst.

  4. Divisional morphogenesis in the marine ciliate Anteholosticha manca(Kahl,1932) Berger,2003(Ciliophora: Urostylida)

    Institute of Scientific and Technical Information of China (English)

    LI Liqiong; HU Xiaozhong; WARREN Alan; AL-RASHEID Khaled A S; AL - FARRAJ Saleh A; SHAO Chen; SONG Weibo

    2008-01-01

    The cortical development and macronuclear evolution of the marine hypotrichous ciliate Anteholosticha manca,collected from the coastal waters near Qingdao,China,were investigated using the protargol impregnation method.The morphogenesis of A.manca is generally typical for the genus,and can be characterized as the following features:(1) in the proter,a new oral primordium is formed on the bottom (beneath the pellicle) of the buccal cavity,disorganization of the parental undulating membranes do not contribute to the formation of this primordium; (2) FVT-cirral anlagen in both dividers develop independently,and very likely on-ly a few midventral cirri join in the formation of these primordia; (3) both marginal row and dorsal kinety anlagen develop intraki-netally within the parental structure; (4) at the middle stage,macronuclear segments fuse together to form a single mass as ob-served in most of its related forms.

  5. Epibiotic ciliates Scyphidia sp. and diatoms on Tigriopus fulvus (Copepoda: Harpacticoida exoskeleton

    Directory of Open Access Journals (Sweden)

    Luigi Pane

    2014-12-01

    Full Text Available Several microorganisms – epibionts – can adhere to living supports taking advantage for their survival, feeding and movement. Epibiosis occurs particularly in aquatic environments, on both benthic and planktonic organisms, among which copepods and cladocerans represent an important living support. The harpacticoid copepod Tigriopus fulvus, living in the splashpools of rocky coasts, was studied to recognize the occurrence of epibionts on the exoskeleton surface using scanning electon microscopy techniques. The first evidence of ciliate Scyphidia sp. on Tigriopus fulvus has been described and the occurrence of algae Cocconeis sp. has been observed as well. Epibionts were found to adhere to antennae, a site linked to the exploitation of water currents carrying food particles to mouthparts and to swimming legs. The reason of the occurrence on swimming legs is less clear and needs further observations. Pertinent results are described and discussed and the influence of epibionts on life cycle and behavior of Tigriopus fulvus is considered.

  6. Experimental identification and analysis of macronuclear non-coding RNAs from the ciliate Tetrahymena thermophila

    DEFF Research Database (Denmark)

    Andersen, Kasper Langebjerg; Nielsen, Henrik

    2012-01-01

    expressed during vegetative growth or sexual reorganization. In order to get an overview of medium-sized (40-500¿nt) RNAs expressed from the Tetrahymena genome, we created a size-fractionated cDNA library from macronuclear RNA and analyzed 80 RNAs, most of which were previously unknown. The most abundant......The ciliate Tetrahymena thermophila is an important eukaryotic model organism that has been used in pioneering studies of general phenomena, such as ribozymes, telomeres, chromatin structure and genome reorganization. Recent work has shown that Tetrahymena has many classes of small RNA molecules...... domain of ribosomal RNA. Of particular interest, we detected two methylations in the 5'-end of U6 small nuclear RNA (snRNA) that has an unusual structure in Tetrahymena. Further, we found a candidate for the first U8 outside metazoans, and an unusual U14 candidate. In addition, a number of candidates...

  7. New Record of Two Marine Ciliates (Ciliophora: Spirotrichea in South Korea

    Directory of Open Access Journals (Sweden)

    Kang-San Kim

    2013-04-01

    Full Text Available Two marine hypotrichous ciliates, Anteholosticha petzi and Ponturostyla enigmatica, were collected from the Yellow Sea and the Korea Strait, respectively, and described using live observation and protargol-impregnated specimens. Furthermore, the nuclear small subunit ribosomal RNA gene of each was sequenced and compared to previously annotated sequences retrieved from the GenBank. Anteholosticha petzi is characterized by 3 frontal cirri (FC, 2 frontoterminal cirri (FTC, 8-12 transverse cirri (TC, 1 buccal cirrus (BC, 9-12 midventral pairs (MP, 3 bipolar dorsal kineties (DK, and 3 types of colorless cortical granules. Ponturostyla enigmatica is characterized by 8 FC, 5 ventral cirri (VC, 5-7 TC, 6-7 marginal rows (MR on each side, 4 complete and 2-3 partial DK, and greenish cortical granules. This is the first identification and description of these 2 species, A. petzi and P. enigmatica, in South Korea.

  8. Nuclear Architecture and Patterns of Molecular Evolution Are Correlated in the Ciliate Chilodonella uncinata.

    Science.gov (United States)

    Maurer-Alcalá, Xyrus X; Katz, Laura A

    2016-01-01

    The relationship between nuclear architecture and patterns of molecular evolution in lineages across the eukaryotic tree of life is not well understood, partly because molecular evolution is traditionally explored as changes in base pairs along a linear sequence without considering the context of nuclear position of chromosomes. The ciliate Chilodonella uncinata is an ideal system to address the relationship between nuclear architecture and patterns of molecular evolution as the somatic macronucleus of this ciliate is composed of a peripheral DNA-rich area (orthomere) and a DNA-poor central region (paramere) to form a "heteromeric" macronucleus. Moreover, because the somatic chromosomes of C. uncinata are highly processed into "gene-sized" chromosomes (i.e., nanochromosomes), we can assess fine-scale relationships between location and sequence evolution. By combining fluorescence microscopy and analyses of transcriptome data from C. uncinata, we find that highly expressed genes have the greatest codon usage bias and are enriched in DNA-poor regions. In contrast, genes with less biased sequences tend to be concentrated in DNA abundant areas, at least during vegetative growth. Our analyses are consistent with recent work in plants and animals where nuclear architecture plays a role in gene expression. At the same time, the unusual localization of nanochromosomes suggests that the highly structured nucleus in C. uncinata may create a "gene bank" that facilitates rapid changes in expression of genes required only in specific life history stages. By using "nonmodel" organisms like C. uncinata, we can explore the universality of eukaryotic features while also providing examples of novel properties (i.e., the presence of a gene bank) that build from these features. PMID:27189988

  9. Ciliated muconodular papillary tumor of the lung: a newly defined low-grade malignant tumor with CT findings reminiscent of adenocarcinoma.

    Science.gov (United States)

    Hata, Yoshinobu; Yuasa, Rena; Sato, Fumitomo; Otsuka, Hajime; Goto, Hidenori; Isobe, Kazutoshi; Mitsuda, Aki; Wakayama, Megumi; Shibuya, Kazutoshi; Takagi, Keigo; Watanabe, Yoshiyuki

    2013-02-01

    A ciliated muconodular papillary tumor has been reported to be a peripheral low-grade malignant tumor, consisting of ciliated columnar cells and goblet cells with basaloid cell proliferation. Although ciliated muconodular papillary tumors have not yet been classified according to the World Health Organization classification, they can pose diagnostic and therapeutic problems. Here we report a resected case of ciliated muconodular papillary tumor with computed tomography findings reminiscent of adenocarcinoma, showing a small irregular nodule adjacent to the intersegment pulmonary vein. There was no uptake of F-18 fluorodeoxyglucose positron emission tomography. The patient underwent surgical resection, and a lobectomy was performed because intraoperative needle biopsy suggested neoplastic proliferation. No EGFR mutations were detected. No recurrence was noted during 24-month follow-up after lobectomy. PMID:23275641

  10. Primers to block the amplification of symbiotic apostome ciliate 18S rRNA gene in a PCR-based copepod diet study

    Science.gov (United States)

    Yi, Xiaoyan; Zhang, Huan; Liu, Guangxing

    2014-05-01

    Pelagic copepods play an important role in the marine food web. However, a full understanding of the ecological status of this zooplankton group depends on the careful study of their natural diets. In previous PCR-based copepod diet studies, we found many apostome ciliates that live symbiotically under the exoskeleton of the copepods, and their sequences were often over-represented in the 18S rRNA gene (18S rDNA) libraries. As a first step to address this issue, we designed three apostome ciliate 18S rDNA blocking primers, and tested their blocking efficiency against apostome ciliate 18s rDNA under various PCR conditions. Using a semi-quantitative PCR method, we optimized the conditions to efficiently amplify the 18S rDNA of the prey while simultaneously excluding the symbiotic apostome ciliates. This technique will facilitate PCR-based diet studies of copepods and other zooplankton in their natural environments.

  11. Importance and nutritional value of large ciliates for the reproduction of Acartia clausi during the post spring-bloom period in the North Sea

    DEFF Research Database (Denmark)

    Dutz, Jörg; Peters, J.

    2008-01-01

    enriched with large prey (> 20 mu m). The mineral (C, N) and lipid contents of the food suspensions were determined for size-fractionated samples to characterize the nutritional composition of prey. Large oligotrich ciliates and Strobiliidae dominated the seston biomass. Ciliates, particularly...... (> 97 %) and was particularly important in providing N to copepods. Ciliates were also rich in PUFA and eicosapentaenoic acid (EPA), which is normally characteristic of diatoms. We conclude that large ciliates constitute an excellent food source for the reproduction of A. clausi. The occurrence......Shipboard experiments were performed to examine the qualitative importance of large marine microzooplankton for the reproduction of Acartia clausi in the North Sea. Feeding and egg production were compared in 2 treatments in which females were fed natural seston or natural seston selectively...

  12. Ectopic Ciliated Cyst in the Mandible Secondary to Genioplasty and Lefort after Two Years: A Case Report and Literature Review

    Science.gov (United States)

    Seifi, Safoura; Sohanian, Shabnam; Khakbaz, Oveis; Abesi, Farida; Aliakbarpour, Fatemeh; Rayani, Arezoo

    2016-01-01

    Introduction: The ectopic ciliated cyst is a rare non-odontogenic cyst which occurs as a delayed complication after maxillary sinus radical surgery; this lesion emerges due to the destruction of the sinus mucosa during the surgery and entrapment of the respiratory epithelium in the region. This lesion has been observed in very rare cases following genioplasty and bimaxillary orthognathic surgery. Case Report: We reported a case of the ectopic ciliated cyst in in the mandible of a 37-year-old Iranian woman following genioplasty and Lefort 1 surgery after 2 years. Its treatment was enucleation. Conclusion: Long-term follow-up after cosmetic surgery of both jaws is recommended due to the probability of this cyst. PMID:27738612

  13. Bioassessment of water quality status using a potential bioindicator based on functional groups of planktonic ciliates in marine ecosystems.

    Science.gov (United States)

    Xu, Henglong; Yong, Jiang; Xu, Guangjian

    2016-09-15

    The feasibility of a potential ecological indicator based on functional groups of planktonic ciliates for bioassessment of water quality status were studied in a bay, northern Yellow Sea. Samples were biweekly collected at five stations with different water quality status during a 1-year period. The multivariate approach based on "bootstrap-average" analysis was used to summarize the spatial variation in functional structure of the samples. The functional patterns represented a significant spatial variability, and were significantly correlated with the changes of nutrients (mainly nitrate nitrogen, NO3-N), alone or in combination with dissolve oxygen and salinity among five stations. The functional diversity represented a clear spatial variation among five stations, and was found to be significantly related to the nutrient NO3-N. According to the results, we suggest that the ecological parameter based on functional groups of planktonic ciliates may be used as a potential bioindicator of water quality status in marine ecosystems. PMID:27318762

  14. Blooms of a benthic ciliate, Maristentor dinoferus (Heterotrichea: Maristentoridae, on coral reefs of Guam, Mariana Islands. (Note

    Directory of Open Access Journals (Sweden)

    Schefter, M.

    2012-05-01

    Full Text Available Maristentor dinoferus is visible in situ with the naked eye; it forms aggregations at several scales: individuals form dynamic clusters within colonies that are normally widely scattered, but in recurrent blooms during the dry seasons of 2005 through 2007, colonies often formed close together in patches (metapopulations. Patches were extremely abundant in Guam, both in Apra Harbor and on the outer coast. This is the first time that long-term changes in a benthic ciliate population have been documented in situ and that multi-scale patchiness has been reported for a benthic ciliate. Colonies were mapped and monitored; some patches over 1 m diameter were recorded. Since 2008, the distribution has again consisted of scattered colonies, as it did from 1999–2004.

  15. Can the halophilic ciliate Fabrea salina be used as a bio-control of microalgae blooms in solar salterns?

    Science.gov (United States)

    Hong, Hyun Pyo; Choi, Joong Ki

    2015-09-01

    The microlage Dunaliella salina, a major producer in salterns, is a serious problem for salt production. In this study we tried to assess if Fabrea salina can control D. salina. By parameterising numerical and functional response (growth and grazing vs prey abundance, respectively) at 90 psu and 30°C, where the ciliate is abundant and grows well, we developed a predator-prey model. The model is used to explore how change in microalga growth rate affect the dynamics, and the functional response is used in combination with field data to assess the potential impact of F. salina on D. salina. Over the 20 d simulation the ciliate controlled the prey population under all prey growth rates; although once D. salina were exhausted below the threshold level, F. salina died due to starvation, allowing the alga to increase in abundance, resulting in one or two predatorprey cycle, depending on prey growth rate. In general, the model predicted trends observed by others in the field, suggesting that it provided a good prediction of what may occur under the conditions we examined. Likewise we show that the ciliate can have a high impact on microalgal populations in the field. Finally, a literature review indicated that F. salina could be a good competitor with other protozoa and metazoan in salterns, depending on salinity and temperature, which requires further study and attention. In summary, we encourage continued studies on this unique ciliate on solar salterns and suggest that it may be useful in the bio-control of micoalgae.

  16. The behaviour of both Listeria monocytogenes and rat ciliated ependymal cells is altered during their co-culture

    OpenAIRE

    Fadaee-Shohada, Mina J.; Hirst, Robert A; Andrew Rutman; Roberts, Ian S.; Chris O'Callaghan; Andrew, Peter W.

    2010-01-01

    BACKGROUND: Ciliated ependymal cells line the cerebral ventricles and aqueducts separating the infected CSF from the brain parenchyma in meningitis. PRINCIPAL FINDINGS: Investigation of the interaction of Listeria monocytogenes with cultured rat brain ependymal cells showed that certain strains reduced the beat frequency of the cilia but all the strains studied significantly reduced the ciliary beat amplitude (the linear distance travelled by the tip of each cilium per beat cycle). CONCLUSION...

  17. Blooms of a benthic ciliate, Maristentor dinoferus (Heterotrichea: Maristentoridae), on coral reefs of Guam, Mariana Islands. (Note)

    OpenAIRE

    Schefter, M.; Lobban, C.S.

    2012-01-01

    Maristentor dinoferus is visible in situ with the naked eye; it forms aggregations at several scales: individuals form dynamic clusters within colonies that are normally widely scattered, but in recurrent blooms during the dry seasons of 2005 through 2007, colonies often formed close together in patches (metapopulations). Patches were extremely abundant in Guam, both in Apra Harbor and on the outer coast. This is the first time that long-term changes in a benthic ciliate population have been ...

  18. Connecting alveolate cell biology with trophic ecology in the marine plankton using the ciliate Favella as a model.

    Science.gov (United States)

    Echevarria, Michael L; Wolfe, Gordon V; Strom, Suzanne L; Taylor, Alison R

    2014-10-01

    Planktonic alveolates (ciliates and dinoflagellates), key trophic links in marine planktonic communities, exhibit complex behaviors that are underappreciated by microbiologists and ecologists. Furthermore, the physiological mechanisms underlying these behaviors are still poorly understood except in a few freshwater model ciliates, which are significantly different in cell structure and behavior than marine planktonic species. Here, we argue for an interdisciplinary research approach to connect physiological mechanisms with population-level outcomes of behaviors. Presenting the tintinnid ciliate Favella as a model alveolate, we review its population ecology, behavior, and cellular/molecular biology in the context of sensory biology and synthesize past research and current findings to construct a conceptual model describing the sensory biology of Favella. We discuss how emerging genomic information and new technical methods for integrating research across different levels of biological organization are paving the way for rapid advance. These research approaches will yield a deeper understanding of the role that planktonic alveolates may play in biogeochemical cycles, and how they may respond to future ocean conditions. PMID:25039294

  19. Insights into bioassessment of marine pollution using body-size distinctness of planktonic ciliates based on a modified trait hierarchy.

    Science.gov (United States)

    Xu, Henglong; Jiang, Yong; Xu, Guangjian

    2016-06-15

    Based on a modified trait hierarchy of body-size units, the feasibility for bioassessment of water pollution using body-size distinctness of planktonic ciliates was studied in a semi-enclosed bay, northern China. An annual dataset was collected at five sampling stations within a gradient of heavy metal contaminants. Results showed that: (1) in terms of probability density, the body-size spectra of the ciliates represented significant differences among the five stations; (2) bootstrap average analysis demonstrated a spatial variation in body-size rank patterns in response to pollution stress due to heavy metals; and (3) the average body-size distinctness (Δz(+)) and variation in body-size distinctness (Λz(+)), based on the modified trait hierarchy, revealed a clear departure pattern from the expected body-size spectra in areas with pollutants. These results suggest that the body-size diversity measures based on the modified trait hierarchy of the ciliates may be used as a potential indicator of marine pollution. PMID:27105728

  20. Acute Toxicities of Potassium Permanganate, Formalin, and Lugol's Iodine Solution to a Marine Ciliate,Pleuronema coronatum ( Ciliophora, Scuticociliatida)

    Institute of Scientific and Technical Information of China (English)

    QIU Yantao; SONG Weibo

    2002-01-01

    Acute toxicities of potassium permanganate, formalin, and Lugol's iodine solution to a commonly occurred ma-rine ciliate Pleuronema coronatum (Ciliophora, Scuticociliatida) were measured. Linear regression analysis of the resultshighlighted the close relationships between doses of the medicines and mortalities of the organisms, thus providing a capabili-ty to predict toxicity effects from the dose. Toxic effects of the medicines on the ciliates were described in the present paper,and the median lethal concentrations (LC50 values) were given. Results of measurements indicated that 2 h-LC50 and 12 h-LC50 values of formalin on P. coronatum were 59.00 × 10-6 and 43.57 × 10 6, while those of Lugol's solutions were 90.13 and67.84 × 10 6 respectively. The tolerance of P. coronatum to formalin is apparently lower than that to Lugol' s iodine solutionand potassium permanganate is a suitable medicine to kill ciliates in short time.

  1. Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote.

    Directory of Open Access Journals (Sweden)

    Jonathan A Eisen

    2006-09-01

    Full Text Available The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma functions that are embodied by distinct nuclei within a single cell. The germline-like micronucleus (MIC has its genome held in reserve for sexual reproduction. The soma-like macronucleus (MAC, which possesses a genome processed from that of the MIC, is the center of gene expression and does not directly contribute DNA to sexual progeny. We report here the shotgun sequencing, assembly, and analysis of the MAC genome of T. thermophila, which is approximately 104 Mb in length and composed of approximately 225 chromosomes. Overall, the gene set is robust, with more than 27,000 predicted protein-coding genes, 15,000 of which have strong matches to genes in other organisms. The functional diversity encoded by these genes is substantial and reflects the complexity of processes required for a free-living, predatory, single-celled organism. This is highlighted by the abundance of lineage-specific duplications of genes with predicted roles in sensing and responding to environmental conditions (e.g., kinases, using diverse resources (e.g., proteases and transporters, and generating structural complexity (e.g., kinesins and dyneins. In contrast to the other lineages of alveolates (apicomplexans and dinoflagellates, no compelling evidence could be found for plastid-derived genes in the genome. UGA, the only T. thermophila stop codon, is used in some genes to encode selenocysteine, thus making this organism the first known with the potential to translate all 64 codons in nuclear genes into amino acids. We present genomic evidence supporting the hypothesis that the excision of DNA from the MIC to generate the MAC specifically targets foreign DNA as a form of genome self-defense. The combination of the genome sequence, the functional diversity encoded therein, and the presence of some pathways missing from

  2. The trophic role and impact of plankton ciliates in the microbial web structure of a tropical polymictic lake dominated by filamentous cyanobacteria

    Directory of Open Access Journals (Sweden)

    Alfonso Esquivel

    2016-03-01

    Full Text Available The recent interest in the plankton structures and dynamics in tropical and subtropical lakes has revealed important trends that set these lakes apart from temperate lakes, and one of the main differences is the enhanced importance of the microbial food web with respect to net plankton. Ciliates are a key component of subtropical and tropical microbial webs because of their role as dominant picoplankton grazers and their ability to channel picoplankton production to the uppermost trophic levels. Plankton ciliates have been found to play a crucial role in the survival of fish larvae in lakes that share several features with Lake Catemaco, a eutrophic tropical Mexican lake. Therefore, the plankton ciliate composition, abundance, and biomass of Lake Catemaco were studied to assess their role in the microbial food web. The data were obtained from surface and bottom water samples collected at eleven points during three surveys in 2011 and an additional survey in 2013, with the surveys covering the local climatic seasons. The most abundant components of the plankton ciliate assemblages were small prostomatids (Urotricha spp., choreotrichs (Rimostrombidium spp., cyclotrichs (Mesodinium and Askenasia, and scuticociliates (Cyclidium, Cinetochilum, Pleuronema, and Uronema. Other important ciliates in terms of abundance and/or biomass were haptorids (Actinobolina, Belonophrya, Monodinium, Paradileptus, and Laginophrya, Halteria, oligotrichs (Limnostrombidium and Pelagostrombidium, Linostomella, Bursaridium, Cyrtolophosis, and Litonotus. The ciliate abundance averaged 57 cells mL-1 and ranged from 14 to 113 cells mL-1. The mean ciliate biomass was 71 µg C L-1 and ranged from 10 to 202 µg C L-1. Differences were not detected in ciliate abundance or biomass between the sampling points or sampling depths (surface to bottom; however, significant differences were observed between seasons for both variables. Nano-sized filamentous cyanobacteria were the most

  3. Morphology, ontogeny, and phylogeny of two brackish urostylid ciliates (Protist, Ciliophora, Hypotricha).

    Science.gov (United States)

    Chen, Xumiao; Miao, Miao; Ma, Honggang; Al-Rasheid, Khaled A S; Xu, Kuidong; Lin, Xiaofeng

    2014-01-01

    The diversity of hypotrichous ciliates has encouraged numerous researchers to use a combination of morphological, morphogenetic, and phylogenetic data to provide a better understanding of the evolutionary relationships within this complex group. In this study, we investigate the morphology and morphogenesis of Pseudourostyla subtropica sp. nov., isolated from mangrove wetland. The new species can be distinguished from its congeners by the huge body size, many more adoral membranelles and marginal cirral rows, and numerous macronuclear nodules. In addition, we provide a morphological characterization of a population of Pseudourostyla nova Wiackowski 1988 from an estuarine habitat. The main events during binary fission of P. subtropica sp. nov. and the Chinese population of P. nova are also revealed to be conservative. The morphological, ontogenetic, and phylogenetic analyses based on the SSU rDNA sequences corroborate the monophyly of Pseudourostyla Borror, 1972, which corresponds well with previous research. The phylogenetic analyses also show that Pseudourostyla and Hemicycliostyla Stokes, 1886, both of which are assigned to the family Pseudourostylidae based on morphological and morphogenetic data, in fact fall into separated clades. The approximately unbiased tests, however, do not reject the possibility that the family Pseudourostylidae is a monophyletic lineage. PMID:25040093

  4. Reconciling cladistic and genetic analyses in choreotrichid ciliates (Ciliophora, Spirotricha, Oligotrichea).

    Science.gov (United States)

    Agatha, Sabine; Strüder-Kypke, Michaela C

    2012-01-01

    Fifty-six features of halteriid, oligotrichid, and choreotrichid ciliates are cladistically analysed, including an updated hypothesis about the evolution of the somatic ciliary patterns. Based on its morphology, Lynnella clusters with Parastrombidinopsis, Parastrombidium, and Strombidinopsis, while it is basal to the other choreotrichids in the molecular phylogenies. The two clusters of Favella species in small subunit rRNA gene trees are supported by morphological features, justifying a separation at genus and family level. The genus Favella has a smooth lorica surface and a somatic ciliary pattern comprising a left and lateral ciliary field as well as two dorsal kineties and a monokinetidal ventral kinety abutting on the right ciliary field. The new genus Schmidingerella n. gen., established for the second Favella cluster, groups with Metacylis and Rhabdonella in the molecular trees. It differs from Favella in (i) a lorica wall with reticulate surface ridges and minute openings and (ii) a ventral kinety that is distinctly apart from the right ciliary field and composed of a monokinetidal anterior and a dikinetidal posterior portion. The genera Codonaria, Codonella, and Codonellopsis are affiliated with the family Dictyocystidae, whose diagnosis is improved to include the lorica sac.

  5. A re-description of the ciliate genus and type species, Balantidium entozoon.

    Science.gov (United States)

    Grim, J Norman; Buonanno, Federico

    2009-08-01

    Members of the ciliate genus Balantidium possess a specialized "Villeneuve-Brachon's" field of somatic cilia to the right of the vestibule, or in a dextroral location. Specimens of the type species were collected in Italy and fixed for study by light microscopy, and scanning and transmission electron microscopy. The presence of the field in the type species and several other species of the genus indicates a need to re-describe the genus by including details of the ultrastructure of that field. Scanning electron microscopy shows that the field consists of one row of relatively short cilia of uniform length flanked on each side by 2-3 rows, or more, of very short cilia. Their kinetids have typical litostome structure in transmission electron micrographs. We speculate on a possible function for the Villeneuve-Brachon's field and also present morphometric data on the type species. The base sequence of the small subunit ribosomal RNA gene of Balantidium entozoon has been determined and found to differ by 5% from that of B. coli. Based on the location and ultrastructure, organelles found around the somatic kinetosomes and within inter-kinetal ridges of B. entozoon were identified as hydrogenosomes. PMID:19251405

  6. Geometric control of ciliated band regulatory states in the sea urchin embryo.

    Science.gov (United States)

    Barsi, Julius C; Li, Enhu; Davidson, Eric H

    2015-03-01

    The trapezoidal ciliated band (CB) of the postgastrular sea urchin embryo surrounds the oral ectoderm, separating it from adjacent embryonic territories. Once differentiated, the CB is composed of densely arranged cells bearing long cilia that endow the larva with locomotion and feeding capability. The spatial pattern from which the CB will arise is first evidenced during pregastrular stages by expression of the pioneer gene onecut. Immediately after gastrulation, the CB consists of four separate regulatory state domains, each of which expresses a unique set of transcription factors: (1) the oral apical CB, located within the apical neurogenic field; (2) the animal lateral CB, which bilaterally separates the oral from aboral ectoderm; (3) the vegetal lateral CB, which bilaterally serves as signaling centers; and (4) the vegetal oral CB, which delineates the boundary with the underlying endoderm. Remarkably, almost all of the regulatory genes specifically expressed within these domains are downregulated by interference with SoxB1 expression, implying their common activation by this factor. Here, we show how the boundaries of the CB subdomains are established, and thus ascertain the design principle by which the geometry of this unique and complex regulatory state pattern is genomically controlled. Each of these boundaries, on either side of the CB, is defined by spatially confined transcriptional repressors, the products of regulatory genes operating across the border of each subdomain. In total this requires deployment of about ten different repressors, which we identify in this work, thus exemplifying the complexity of information required for spatial regulatory organization during embryogenesis.

  7. Propulsion of swimming microrobots inspired by metachronal waves in ciliates: from biology to material specifications

    International Nuclear Information System (INIS)

    The quest for swimming microrobots originates from possible applications in medicine, especially involving navigation in bodily fluids. Swimming microorganisms have become a source of inspiration because their propulsion mechanisms are effective in the low-Reynolds number regime. In this study, we address a propulsion mechanism inspired by metachronal waves, i.e. the spontaneous coordination of cilia leading to the fast swimming of ciliates. We analyse the biological mechanism (referring to its particular embodiment in Paramecium caudatum), and we investigate the contribution of its main features to the swimming performance, through a three-dimensional finite-elements model, in order to develop a simplified, yet effective artificial design. We propose a bioinspired propulsion mechanism for a swimming microrobot based on a continuous cylindrical electroactive surface exhibiting perpendicular wave deformations travelling longitudinally along its main axis. The simplified propulsion mechanism is conceived specifically for microrobots that embed a micro-actuation system capable of executing the bioinspired propulsion (self-propelled microrobots). Among the available electroactive polymers, we select polypyrrole as the possible actuation material and we assess it for this particular embodiment. The results are used to appoint target performance specifications for the development of improved or new electroactive materials to attain metachronal-waves-like propulsion. (paper)

  8. Genesis of amorphous calcium carbonate containing alveolar plates in the ciliate Coleps hirtus (Ciliophora, Prostomatea).

    Science.gov (United States)

    Lemloh, Marie-Louise; Marin, Frédéric; Herbst, Frédéric; Plasseraud, Laurent; Schweikert, Michael; Baier, Johannes; Bill, Joachim; Brümmer, Franz

    2013-02-01

    In the protist world, the ciliate Coleps hirtus (phylum Ciliophora, class Prostomatea) synthesizes a peculiar biomineralized test made of alveolar plates, structures located within alveolar vesicles at the cell cortex. Alveolar plates are arranged by overlapping like an armor and they are thought to protect and/or stiffen the cell. Although their morphology is species-specific and of complex architecture, so far almost nothing is known about their genesis, their structure and their elemental and mineral composition. We investigated the genesis of new alveolar plates after cell division and examined cells and isolated alveolar plates by electron microscopy, energy-dispersive X-ray spectroscopy, FTIR and X-ray diffraction. Our investigations revealed an organic mesh-like structure that guides the formation of new alveolar plates like a template and the role of vesicles transporting inorganic material. We further demonstrated that the inorganic part of the alveolar plates is composed out of amorphous calcium carbonate. For stabilization of the amorphous phase, the alveolar vesicles, the organic fraction and the element phosphorus may play a role.

  9. Calcium in ciliated protozoa: sources, regulation, and calcium-regulated cell functions.

    Science.gov (United States)

    Plattner, H; Klauke, N

    2001-01-01

    In ciliates, a variety of processes are regulated by Ca2+, e.g., exocytosis, endocytosis, ciliary beat, cell contraction, and nuclear migration. Differential microdomain regulation may occur by activation of specific channels in different cell regions (e.g., voltage-dependent Ca2+ channels in cilia), by local, nonpropagated activation of subplasmalemmal Ca stores (alveolar sacs), by different sensitivity thresholds, and eventually by interplay with additional second messengers (cilia). During stimulus-secretion coupling, Ca2+ as the only known second messenger operates at approximately 5 microM, whereby mobilization from alveolar sacs is superimposed by "store-operated Ca2+ influx" (SOC), to drive exocytotic and endocytotic membrane fusion. (Content discharge requires binding of extracellular Ca2+ to some secretory proteins.) Ca2+ homeostasis is reestablished by binding to cytosolic Ca2+-binding proteins (e.g., calmodulin), by sequestration into mitochondria (perhaps by Ca2+ uniporter) and into endoplasmic reticulum and alveolar sacs (with a SERCA-type pump), and by extrusion via a plasmalemmal Ca2+ pump and a Na+/Ca2+ exchanger. Comparison of free vs total concentration, [Ca2+] vs [Ca], during activation, using time-resolved fluorochrome analysis and X-ray microanalysis, respectively, reveals that altogether activation requires a calcium flux that is orders of magnitude larger than that expected from the [Ca2+] actually required for local activation.

  10. Trichodina modesta: an exotic ciliate in the Neotropical region parasitizing an unusual host.

    Science.gov (United States)

    Valladão, Gustavo Moraes Ramos; Giannecchini, Luiz Gustavo; Martins, Maurício Laterça; de Pádua, Santiago Benites

    2015-01-01

    In this study, an important ornamental fish, Betta splendens (Osphronemidae), from three different Brazilian states was examined for parasitic infestations. Smears with parasites were impregnated with silver nitrate or stained using Giemsa for taxonomic evaluation. A disc-shaped trichodinid with a body diameter of 39.7 ± 3.3 µm, adhesive disc diameter of 32.9 ± 3.1 µm and denticulate ring diameter of 19.5 ± 2.0 µm was found. The morphological characteristics resembled those of Trichodina modesta Lom, 1970, a species that shows clear host specificity for Cypriniformes. Until now, its occurrence was restricted to the Eurasian region. In the present study, a new host for T. modesta is reported and therefore the first occurrence of this species in the Americas. The parasite was possibly introduced into the Neotropical region through the exotic fish trade, especially of Cypriniformes used by aquarists. The distribution of this ciliate is discussed and a checklist of localities and hosts for the species is provided. PMID:26154956

  11. Purification and partial characterization of glyceraldehyde-3-phosphate dehydrogenase from the ciliate Tetrahymena thermophila

    Institute of Scientific and Technical Information of China (English)

    Nadia Errafiy; Abdelaziz Soukri

    2012-01-01

    In the present study,we purified the glycolytic enzymeglyceraldehyde-3-phosphate dehydrogenase (GAPDH)which is involved in cellular energy production and has important housekeeping functions,from the ciliate Tetrahymena thermophila using a three-step procedure.The enzyme was purified ~68 folds by ammonium sulfate precipitation,followed by two steps of column chromatography (DEAE-cellulose and Mono-S).The purified enzyme is a homotetramer with a molecular weight of ~120 kDa.Isoelectric focusing analysis showed the presence of only one basic GAPDH isoform with an isoelectric point of 8.8.Western blot analysis showed a single 32-kDa band corresponding to the enzyme subunit using a monospecific polyclonal antibody against the T.thermophila GAPDH.The maximum of enzyme activity occurred at pH 8.0 and at 30-35℃.The apparent Km values for both NAD+ and D-glyceraldehyde-3-phosphate were 0.102±0.012 and 0.360 + 0.018 mM,respectively.The maximal velocity (Vmax) was 39.40 + 2.95 U/mg.The T.thermophila GAPDH is inhibited by oxidative and nitrosative stress reagents.

  12. Novel Discovery of Two Heterotrichid Ciliates, Climacostomum virens and Fabrea salina (Ciliophora: Heterotrichea: Heterotrichida in Korea

    Directory of Open Access Journals (Sweden)

    Kim, Ji Hye

    2015-07-01

    Full Text Available Two heterotrichid ciliates, Climacostomum virens (Ehrenberg, 1838 Stein, 1859 from brackish water and freshwater, and Fabrea salina Henneguy, 1890 from a solar saltern, were collected in Korea. They are novelly investigated in Korea by means of live observation, protargol staining and nuclear small subunit (SSU rRNA gene sequencing. Climacostomum virens is characterized by pouch-like body shape, body length of $200-370{\\mu}m$ 수식 이미지 in vivo, conspicuous cytopharyngeal tube, macronuclei ribbon-like shape, and one to four in number, with or without symbiont algae in cytoplasm, 34-66 somatic kineties, 67-113 adoral zone of membranelles, 8-42 peristomial kineties, 24-37 apical membranelles. SSU rDNA sequence size is 1,591 bp and GC contents 48.52%. Fabrea salina is also characterized by scoop-like body shape with proboscis, body length of $190-240{\\mu}m$ 수식 이미지 in vivo, one to two rod-shaped macronuclei, oval micronuclei, grayish green cortical granules, 104-186 somatic kineties, 4-8 preoral kineties, 7-19 peristomial kineties and fragmented paroral membrane. SSU rDNA sequence size is 1,598 bp and GC contents 47.50%.

  13. 温度、PEG处理和盐胁迫对小车前种子萌发的影响%Effects of Temperature, Stress Induced by PEG-8000 and NaCl Solutions on Seed Germination of Plantago minuta(Pall)

    Institute of Scientific and Technical Information of China (English)

    田美华; 唐安军

    2011-01-01

    本研究旨在探讨短命植物小车前(Plantago minuta Pall.)种子的休眠特性及其对温度、干旱和盐胁迫等因子的响应特点.在10、15、20、25和30℃的不同恒温条件以及每日15、25℃各12h的变温条件下,新鲜的小车前种子萌发率较低,其最高萌发率为15%.在经60d的干藏后,种子休眠被解除;已解除休眠的种子的萌发是温度依赖的,以20℃为最佳,此时萌发率为97%.解除休眠后的小车前种子萌发率随PEG-8000和NaCl溶液浓度的升高而降低.结果表明,小车前种子具初级休眠,且在长期适应环境过程中形成了独特的生态适应性;对干旱和盐胁迫有一定的耐性.进一步推知,短命植物小车前特定的休眠特点和萌发模式是其适应与进化的重要基础;此种植物在严重干旱发生早期完成生活史,是避旱型植物.%The present study aimed at investigating dormant characteristics and responses to germination temperature, drought and salt stress of Plantago minuta seeds. Freshly harvested seeds of P. Minuta did not germinate well and showed innate dormancy at broad range of constant temperatures (10, 15, 20, 25 and 30 ℃ ) and an altering temperature of 25/15 ℃ with a 12 h photoperiod. However, the dormancy was broken after 60 d dry storage at 4 ℃. Obviously, the germination was temperature-dependent and the optimum temperature was 20 ℃ with the germination of 97% in light. Also, the decrease in the final germination percentages was observed with increase in concentration of both PEG-8000 and NaCl solutions. It suggested that P. Minuta produces innate dormant seeds and develops its unique ecological adaptation although this species is able to tolerate weak salt stress and water deficiency. Based on these results above, it could be inferred that the particular dormant characteristics and germination pattern underlie its adaptation to the desert environment and evolve in the field. Moreover, P. Minuta has an

  14. Preliminary insights into the impact of dietary starch on the ciliate, Neobalantidium coli, in captive chimpanzees.

    Directory of Open Access Journals (Sweden)

    Kateřina Schovancová

    Full Text Available Infections caused by the intestinal ciliate Neobalantidium coli are asymptomatic in most hosts. In humans and captive African great apes clinical infections occasionally occur, manifested mainly by dysentery; however, factors responsible for development of clinical balantidiasis have not been fully clarified. We studied the effect of dietary starch on the intensities of infection by N. coli in two groups of captive chimpanzees. Adult chimpanzees infected by N. coli from the Hodonín Zoo and from the Brno Zoo, Czech Republic, were fed with a high starch diet (HSD (average 14.7% of starch for 14 days, followed by a five-day transition period and subsequently with a period of low starch diet (LoSD (average 0.1% of starch for another 14 days. We collected fecal samples during the last seven days of HSD and LoSD and fixed them in 10% formalin. We quantified trophozoites of N. coli using the FLOTAC method. The numbers of N. coli trophozoites were higher during the HSD (mean ± SD: 49.0 ± 134.7 than during the LoSD (3.5 ± 6.8. A generalized linear mixed-effects model revealed significantly lower numbers of the N. coli trophozoites in the feces during the LoSD period in comparison to the HSD period (treatment contrast LoSD vs. HSD: 2.7 ± 0.06 (SE, z = 47.7; p<<0.001. We conclude that our data provide a first indication that starch-rich diet might be responsible for high intensities of infection of N. coli in captive individuals and might predispose them for clinically manifested balantidiasis. We discuss the potential nutritional modifications to host diets that can be implemented in part to control N. coli infections.

  15. Effects of a radiosensitizer and radiation on the ciliated mucous membrane

    International Nuclear Information System (INIS)

    Fractionated irradiation (2 Gy/F, TD:2-20 Gy) in vivo on the ciliated epithelium of the rabbit's trachea, caused measurable physiological alternations ten consecutive days after completion of irradiation with an initial heightening of the ciliary activity after 2 and 4 Gy, followed by a dose-dependent decrease. On scanning electron microscopy-pictures, knobs were observed on the cilia with the number being related to the dose. The addition of misonidazole potentiated the effects described above, with an enhancement ratio ( physiologically) of 1.2 and an enhancement ratio (morphologically) of 1.6. Furthermore, administration of misonidazole to the rabbits caused an increased vascularity in the subepithelial layer of the trachea, directly correlated to an oedema in the same region. Single doses (2,2.5,5,10,15,20,25, and 30 Gy) were given to the trachea in vivo and daily investigation of the ciliary beating and morphologic examinations of the tissue were made for ten days. The ciliary activity showed a dose-dependent reduction of about 50% after 30 Gy. A development of damage, in relation to the dose, was observed in the cilia. The changes were blebs, swollen tips, bent and curved tips, and broken cilia clustered together. During in vitro irradiation with 10 Gy Single Dose, an increase of the ciliary activity to about 25 % of its original value was observed without any morphological changes, while in vivo irradiation and examinations during 10 days thereafter, showed three different phases, day 1-3: Stimulation phase, day 4-8: Damage-phase, day 9-10: Repair-phase. The ciliary epithelium offers an exceptional system for the study of early radiobiological effects, since mutual comparisons can be made between physiology and morphology. (Author)

  16. Gene expression in a paleopolyploid: a transcriptome resource for the ciliate Paramecium tetraurelia

    Directory of Open Access Journals (Sweden)

    Kapusta Aurélie

    2010-10-01

    Full Text Available Abstract Background The genome of Paramecium tetraurelia, a unicellular model that belongs to the ciliate phylum, has been shaped by at least 3 successive whole genome duplications (WGD. These dramatic events, which have also been documented in plants, animals and fungi, are resolved over evolutionary time by the loss of one duplicate for the majority of genes. Thanks to a low rate of large scale genome rearrangement in Paramecium, an unprecedented large number of gene duplicates of different ages have been identified, making this organism an outstanding model to investigate the evolutionary consequences of polyploidization. The most recent WGD, with 51% of pre-duplication genes still in 2 copies, provides a snapshot of a phase of rapid gene loss that is not accessible in more ancient polyploids such as yeast. Results We designed a custom oligonucleotide microarray platform for P. tetraurelia genome-wide expression profiling and used the platform to measure gene expression during 1 the sexual cycle of autogamy, 2 growth of new cilia in response to deciliation and 3 biogenesis of secretory granules after massive exocytosis. Genes that are differentially expressed during these time course experiments have expression patterns consistent with a very low rate of subfunctionalization (partition of ancestral functions between duplicated genes in particular since the most recent polyploidization event. Conclusions A public transcriptome resource is now available for Paramecium tetraurelia. The resource has been integrated into the ParameciumDB model organism database, providing searchable access to the data. The microarray platform, freely available through NimbleGen Systems, provides a robust, cost-effective approach for genome-wide expression profiling in P. tetraurelia. The expression data support previous studies showing that at short evolutionary times after a whole genome duplication, gene dosage balance constraints and not functional change are

  17. Generation and analysis of expressed sequence tags from the ciliate protozoan parasite Ichthyophthirius multifiliis

    Directory of Open Access Journals (Sweden)

    Arias Covadonga

    2007-06-01

    Full Text Available Abstract Background The ciliate protozoan Ichthyophthirius multifiliis (Ich is an important parasite of freshwater fish that causes 'white spot disease' leading to significant losses. A genomic resource for large-scale studies of this parasite has been lacking. To study gene expression involved in Ich pathogenesis and virulence, our goal was to generate expressed sequence tags (ESTs for the development of a powerful microarray platform for the analysis of global gene expression in this species. Here, we initiated a project to sequence and analyze over 10,000 ESTs. Results We sequenced 10,368 EST clones using a normalized cDNA library made from pooled samples of the trophont, tomont, and theront life-cycle stages, and generated 9,769 sequences (94.2% success rate. Post-sequencing processing led to 8,432 high quality sequences. Clustering analysis of these ESTs allowed identification of 4,706 unique sequences containing 976 contigs and 3,730 singletons. These unique sequences represent over two million base pairs (~10% of Plasmodium falciparum genome, a phylogenetically related protozoan. BLASTX searches produced 2,518 significant (E-value -5 hits and further Gene Ontology (GO analysis annotated 1,008 of these genes. The ESTs were analyzed comparatively against the genomes of the related protozoa Tetrahymena thermophila and P. falciparum, allowing putative identification of additional genes. All the EST sequences were deposited by dbEST in GenBank (GenBank: EG957858–EG966289. Gene discovery and annotations are presented and discussed. Conclusion This set of ESTs represents a significant proportion of the Ich transcriptome, and provides a material basis for the development of microarrays useful for gene expression studies concerning Ich development, pathogenesis, and virulence.

  18. Evaluate the potential environmental toxicity of quantum dots on ciliated protozoa by microcalorimetry

    Energy Technology Data Exchange (ETDEWEB)

    Xiao, Qi [College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001 (China); State Key Laboratory of Virology, College of Chemistry and Molecular Sciences, Wuhan University, Wuhan 430072 (China); Huang, Shan, E-mail: huangs@whu.edu.cn [College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001 (China); State Key Laboratory of Virology, College of Chemistry and Molecular Sciences, Wuhan University, Wuhan 430072 (China); Su, Wei [College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001 (China); Li, Peiyuan [College of Pharmacy, Guangxi Traditional Chinese Medical University, Nanning 530001 (China); Liang, Zuocui; Ou, Jianzhen; Ma, Jianqiang [College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001 (China); Liu, Yi, E-mail: prof.liuyi@263.net [State Key Laboratory of Virology, College of Chemistry and Molecular Sciences, Wuhan University, Wuhan 430072 (China)

    2012-11-10

    Highlights: Black-Right-Pointing-Pointer The toxic effects of QDs to T. thermophila BF{sub 5} using a TAM air microcalorimeter. Black-Right-Pointing-Pointer QDs were acutely toxic for T. thermophila BF{sub 5} growth in a dose-dependent manner. Black-Right-Pointing-Pointer The toxicity of different ligands-capped QDs on T. thermophila BF{sub 5} was investigated. Black-Right-Pointing-Pointer QDs could be ingested by cells and affect the morphology of T. thermophila BF{sub 5}. - Abstract: In the present study, we evaluated the toxic effects of mercaptoacetic acid (MAA)-capped CdSe QDs and CdSe/ZnS QDs to particle-ingesting model ciliated protozoa Tetrahymena thermophila BF{sub 5} (T. thermophila BF{sub 5}) by using a TAM air isothermal microcalorimeter. These results suggested that both MAA-CdSe QDs and MAA-CdSe/ZnS QDs were indeed acutely toxic for T. thermophila BF{sub 5} growth in a dose-dependent manner, and the toxicities of both MAA-CdSe QDs and MAA-CdSe/ZnS QDs increased dramatically after UV irradiation due to the liberation of more toxic Cd{sup 2+}, which indicated that the toxicity of MAA-CdSe/ZnS QDs was less than that of MAA-CdSe QDs. Furthermore, the toxicity of different ligands-capped CdSe/ZnS QDs on T. thermophila BF{sub 5} was also investigated. The uptake of MAA-CdSe/ZnS QDs and adenosine 5 Prime -monophosphate (AMP)-CdSe/ZnS QDs by cells and the morphological change during the process of T. thermophila BF{sub 5} growth incubated with these QDs were further studied by fluorescence inverted microscopy.

  19. 红椿育苗密度研究%Cultivation Density of Toona ciliate

    Institute of Scientific and Technical Information of China (English)

    吴际友; 黄明军; 陈明皋; 程勇; 廖德志; 李艳; 刘球; 王旭军

    2014-01-01

    为了探讨2年生红椿苗最佳的育苗密度,开展了红椿育苗密度试验研究,结果表明:随着育苗密度增加,苗木的苗高和地径均减小,苗木的质量下降。因此,确定合理的育苗密度是培育优质红椿苗并取得最佳育苗效益的关键。研究表明:二年生的红椿苗木如只生产Ⅰ级苗,则合适的育苗密度为30株/m2;如Ⅰ、Ⅱ级苗均用于生产造林,则合适的育苗密度为40株/m2。%ln order to discuss the optimum seedling density of Toona ciliate, different seedling densities were studied. The results showed that seeding height and basal diameter decreased and quality of the seedlings declined with the increase of seedling density. The reasonable density of seedlings is key to cultivate high-quality seedlings and achieve the best seedling efficiency. The optimum density was 30 plants/m2 for the first class seedlings of biennial seedlings, and the optimum density of l and ll seedlings for production afforestation was 40 plants/m2.

  20. Cross-study analysis of genomic data defines the ciliate multigenic epiplasmin family: strategies for functional analysis in Paramecium tetraurelia

    Directory of Open Access Journals (Sweden)

    Ravet Viviane

    2009-06-01

    Full Text Available Abstract Background The sub-membranous skeleton of the ciliate Paramecium, the epiplasm, is composed of hundreds of epiplasmic scales centered on basal bodies, and presents a complex set of proteins, epiplasmins, which belong to a multigenic family. The repeated duplications observed in the P. tetraurelia genome present an interesting model of the organization and evolution of a multigenic family within a single cell. Results To study this multigenic family, we used phylogenetic, structural, and analytical transcriptional approaches. The phylogenetic method defines 5 groups of epiplasmins in the multigenic family. A refined analysis by Hydrophobic Cluster Analysis (HCA identifies structural characteristics of 51 epiplasmins, defining five separate groups, and three classes. Depending on the sequential arrangement of their structural domains, the epiplasmins are defined as symmetric, asymmetric or atypical. The EST data aid in this classification, in the identification of putative regulating sequences such as TATA or CAAT boxes. When specific RNAi experiments were conducted using sequences from either symmetric or asymmetric classes, phenotypes were drastic. Local effects show either disrupted or ill-shaped epiplasmic scales. In either case, this results in aborted cell division. Using structural features, we show that 4 epiplasmins are also present in another ciliate, Tetrahymena thermophila. Their affiliation with the distinctive structural groups of Paramecium epiplasmins demonstrates an interspecific multigenic family. Conclusion The epiplasmin multigenic family illustrates the history of genomic duplication in Paramecium. This study provides a framework which can guide functional analysis of epiplasmins, the major components of the membrane skeleton in ciliates. We show that this set of proteins handles an important developmental information in Paramecium since maintenance of epiplasm organization is crucial for cell morphogenesis.

  1. ON THE MARINE CILIATE, Pseudocohnilembus hargisi (PROTOZOA, CILIOPHORA, SCUTICOCILIATIDA) WITH COMPARISON OF ITS RELATED SPECIES

    Institute of Scientific and Technical Information of China (English)

    龚骏; 马宏伟; 宋微波

    2002-01-01

    The living morphology, nuclear apparatus, infraciliature and silverline system of the poorly-known ciliate Pseudocohnilembus hargisi Evans & Thompson, 1964, collected from a shrimp culture pond in Qingdao, China, were examined by observation of the live specimen ; and by the pyridinated carbonate method and Chatton-Lwoff technique. The main characteristics: 13 - 14 (usually 13) longitudinal or slightly spirally arranged somatic kineties; single contractile vacuole with usually 2 ( 1 - 2) pores at posterior ends of the fourth and fifth somatic kineties to the fight of the buccal cavity. Several related congeners were compared and morphometrically tabulated.

  2. Role of essential lipids in copepod nutrition: no evidence for trophic upgrading of food quality by a marine ciliate

    DEFF Research Database (Denmark)

    Klein Breteler, W.; Koski, Marja; Rampen, S.

    2004-01-01

    -quality Rhodomonas sp. diet. The specific mass of fatty acids in S. sulcatum was much lower than in the Dunaliella sp. diet, However, the fatty acid composition of the protozoan more or less resembled that of the food, lacking long-chain highly unsaturated fatty acids (HUFAs). Sterols only occurred in Dunaliella sp......., although in low abundance of unuseful Delta7 sterols. Obviously, S. sulcatum did not biochemically enhance bacterial or algal food for subsequent use at higher trophic levels, and only transferred fatty acids without further conversion. The results indicate a deficiency in the ciliate of HUFAs and sterols...

  3. Potential risk of Mesodinium rubrum bloom in aquaculture area of Dapeng'ao cove, China: diurnal changes in the ciliate community structure in the surface water

    Directory of Open Access Journals (Sweden)

    Huaxue Liu

    2012-02-01

    Full Text Available Diurnal changes in the structure of the ciliate community in surface waters were studied in the aquaculture area of Dapeng'ao cove,China. Two periods of heavy rainfall occurred during the study period, intensifying water column stratification and influencing the water'sproperties. A total of 21 ciliate taxa from 15 genera were identified; the dominant species was Mesodinium rubrum. The maximumabundance of M. rubrum reached 3.92 × 104 indiv. dm-3,contributing 95.1% (mean value to the total ciliate abundance.Diurnal changes in M. rubrum abundance were highly variable, the driving force probably being irradiance and food availability.The results suggest that M. rubrum may form blooms in aquaculture areas when there is a suitable physical regime with enriched nutrients,which is potentially harmful to the fish-farming industry.

  4. Ciliated Median Raphe Cyst of Perineum Presenting as Perianal Polyp: A Case Report with Immunohistochemical Study, Review of Literature, and Pathogenesis

    OpenAIRE

    Jayesh Sagar; Bethani Sagar; Patel, Adam F.; Shak, D.K.

    2006-01-01

    Median raphe cyst is a very rare, benign congenital lesion occurring mainly on the ventral aspect of the penis, but can develop anywhere in the midline between the external urethral meatus and anus. We report a case of median raphe cyst in the perineum presenting as a perianal polyp in a 65-year-old, English white male with exceptionally rare ciliated epithelium. According to our knowledge, this is the third such case of ciliated median raphe cyst in the English literature. This case, also th...

  5. Cultivation-independent analysis reveals a shift in ciliate 18S rRNA gene diversity in a polycyclic aromatic hydrocarbon-polluted soil

    OpenAIRE

    Lara, Enrique; Berney, Cédric; Harms, Hauke; Chatzinotas, Antonis

    2010-01-01

    Using cultivation-independent methods the ciliate communities of a clay-rich soil with a 90-year record of pollution by polycyclic aromatic hydrocarbons (PAH) (4.5 g kg−1 PAH) were compared with that of a nonpolluted soil collected in its vicinity and with similar properties. A ciliate-specific set of 18S rRNA gene targeting primers was designed and used to amplify DNA extracted from both soils (surface and 20 cm depth). Four clone libraries were generated with PCR products that covered an 18...

  6. Effect of the rumen ciliates Entodinium caudatum, Epidinium ecaudatum and Eudiplodinium maggii, and combinations thereof, on ruminal fermentation and total tract digestion in sheep.

    Science.gov (United States)

    Zeitz, Johanna O; Amelchanka, Sergej L; Michałowski, Tadeusz; Wereszka, Krzysztof; Meile, Leo; Hartnack, Sonja; Kreuzer, Michael; Soliva, Carla R

    2012-06-01

    The quantitative importance of individual ciliate species and their interaction in the rumen is still unclear. The present study was performed to test whether there are species differences in the influence on ruminal fermentation in vivo and if combinations of ciliates act additive in that respect. Six adult wethers fed a hay-concentrate diet were defaunated, then refaunated either with Entodinium caudatum (EC), Epidinium ecaudatum (EE) or Eudiplodinium maggii (EM) alone, then progressively with all possible species combinations. Feed, faeces, urine, ruminal fluid and gas were sampled for eight days always after at least 21 days of adaptation. With a linear mixed model, accounting for the 2 x 2 x 2 full factorial study design, mean marginal effect sizes, i.e., the magnitude of change in variables as caused by the presence of each ciliate species or of combinations of them, were estimated. The apparent digestibility of organic matter and neutral detergent fibre remained unaffected. The apparent N digestibility increased by 0.054 with EM (0.716 with defaunation). Ruminal ammonia increased by 1.6, 4.0 and 8.7 mmol/l in the presence of EM, EC and EE, respectively, compared to defaunation (6.9 mmol/l). In the EM + EE combination, ruminal ammonia was lower than would have been expected from an additive effect. With EE, total short-chain fatty acids increased by 23 mmol/l (100 mmol/l with defaunation), but not when EE was combined with EM. The acetate-to-propionate ratio decreased by 0.73 units in the presence of EE (4.0 with defaunation), but only when EE was the sole ciliate species in the rumen. In the presence of any ciliate species, the 16S rDNA copies of total Bacteria and major fibrolytic species decreased to 0.52- and 0.22-fold values, respectively of that found without protozoa. Total Archaea were unaffected; however, Methanobacteriales copies increased 1.44-fold with EC. The CH4-to-CO2 ratio of ruminal gas decreased by 0.036 with EM and 0.051 with EE (0.454 with

  7. The response of the ciliated epithelium during and after exposure to ionizing radiation

    International Nuclear Information System (INIS)

    Irradiation of the ciliated tissues of the body gives undesirable sideefects. In vitro irradiation (10 Gy) of the rabbit's trachea shows that 1.5 Gy of indirectly ionizing radiation (50 kV and 6 MV X-ray 60Co-gamma 1.25 MeV) causes a 20 per cent increase of the ciliary beat frequency lasting 5-10 seconds, followed by a decline to normal ciliary activity during the ensuing course of irradiation. Electron radiation (4 MeV) proved to be three times more effective than photon radiation in regard to the physiological response of the cilia to ionizing radiation. This finding led to introduction of the concept Relative Physiological Efficiency (RPE) in this study, complementing the Relative Biological Efficiency (RBE) concept. This momentary increase in frequency can be caused by a radiation-induced increased hydrolysis of the ATP available in the cilia. The ciliary activity was 20 per cent lower than normal at 45 min following irradiation (10 Gy, 50 kV X-ray), whereupon it increased to 12 per cent above normal activity at two hours after initial irradiation. At re-irradiation (10 Gy, 50 kV X-ray) administered two hours after initial irradiation, the cilia showed a constant rate of activity. In vivo irradiation (10 Gy, 160 kV X-ray) of the trachea of the rabbit caused a heightened activity (10%) during the first three days after irradiation, indicating a stimulation of the ATP-synthesis. During days 4 to 8 after irradiation, the ciliary epithelium's morphology was damaged resulting in reduced transport ability. Repair took place during days 9 and 10 after irradiation, i.e. the function of the ciliary epithelium appeared to be restored. The membrane potential of the ciliary cell, registered during irradiation (10 Gy, 50 kV X-ray) showed no changes, which supports the assumption that the increased ciliary beat frequency recorded during irradiation can be due to rapid radiation-induced biochemical changes that are connected to the motility of the cilia. (author)

  8. Fate of engineered cerium oxide nanoparticles in an aquatic environment and their toxicity toward 14 ciliated protist species.

    Science.gov (United States)

    Zhang, Wei; Pu, Zhichao; Du, Songyan; Chen, Yongsheng; Jiang, Lin

    2016-05-01

    The potential environmental impacts of engineered cerium oxide nanoparticles (CeO2 NPs) on aquatic organisms have remained largely unknown. Therefore, the laboratory study featured herein was performed to determine the fate of CeO2 NPs in an aquatic environment and their toxicity towards 14 different ciliated protist species at a specified population level. An investigation of 48 h aggregation kinetics in the Dryl's solution showed the CeO2 NPs to be relatively stable. The pH values in three test medium were too far away from PZC, which explained the stability of CeO2 NPs. CeO2 NPs generally elicited more toxicity with increasing NP concentration, following certain dose-response relationships. Nano-CeO2 resulted in greater toxicity in a particle state than when added as bulk material. LC50 values showed a negative correlation with the surface-to-volume ratio for these protists, suggesting that surface adsorption of CeO2 NPs might contribute to the observed toxicity. Additionally, acute toxic responses of 14 ciliated protist species to CeO2 NPs were not significantly phylogenetically conserved. The results of these observations provide a better insight into the potential risks of CeO2 NPs in an aquatic environment. PMID:26986089

  9. OCT-based quantification of flow velocity, shear force, and power generated by a biological ciliated surface (Conference Presentation)

    Science.gov (United States)

    Huang, Brendan K.; Khokha, Mustafa K.; Loewenberg, Michael; Choma, Michael A.

    2016-03-01

    In cilia-driven fluid flow physiology, quantification of flow velocity, shearing force, and power dissipation is important in defining abnormal ciliary function. The capacity to generate flow can be robustly described in terms of shearing force. Dissipated power can be related to net ATP consumption by ciliary molecular motors. To date, however, only flow velocity can be routinely quantified in a non-invasive, non-contact manner. Additionally, traditional power-based metrics rely on metabolic consumption that reflects energy consumption not just from cilia but also from all active cellular processes. Here, we demonstrate the estimation of all three of these quantities (flow velocity, shear force, and power dissipation) using only optical coherence tomography (OCT). Specifically, we develop a framework that can extract force and power information from vectorial flow velocity fields obtained using OCT-based methods. We do so by (a) estimating the viscous stress tensor from flow velocity fields to estimate shearing force and (b) using the viscous stress tensor to estimate the power dissipation function to infer total mechanical power. These estimates have the advantage of (a) requiring only a single modality, (b) being non-invasive in nature, and (c) being reflective of only the net power work generated by a ciliated surface. We demonstrate our all-optical approach to the estimation of these parameters in the Xenopus animal model system under normal and increased viscous loading. Our preliminary data support the hypothesis that the Xenopus ciliated surface can increase force output under loading conditions.

  10. Ciliary-propelling mechanism, effect of temperature and viscosity on swimming speed, and adaptive significance of ‘jumping’ in the ciliate Mesodinium rubrum

    DEFF Research Database (Denmark)

    Riisgård, Hans Ulrik; Larsen, Poul Scheel

    2009-01-01

    Beating cilia are important organelles, not only for water pumping in many active filter-feeding organisms, but also for the swimming activity of ciliates and other aquatic organisms that use cilia for propulsion. The present study concerns the effect of temperature-dependent viscosity of the amb...

  11. A Review of Some Basic Parasite Diseases in Culture Fisheries Flagellids, Dinoflagellides and Ichthyophthriasis, Ichtyobodiasis, Coccidiosis Trichodiniasis, Heminthiasis, Hirudinea Infestation, Crustacean Parsite and Ciliates

    OpenAIRE

    J.F.N. Abowei; O.F. Briyai; S.E. Bassey

    2011-01-01

    A review some basic parasite diseases in fish: flagellids, dinoflagellides and ichthyophthriasis in African fish was carried out to educate fish culturist and the private sector on some challenges faced in culture fisheries. Some common parasite diseases: Ichtyobodiasis, Coccidiosis, Ichtyopthiariasis, Trichodiniasis, Heminthiasis, Crustacean parasite, Hirudinea infestation, Flagellates and Ciliates, Taxonomy and diagnosis, Life cycle and biology, Epizootiology, pathology, control, Infections...

  12. TINTINNID CILIATES FROM QINGDAO (PROTOZOA, CILIOPHORA, TINTINNIDA)%青岛沿海砂壳纤毛虫(原生动物,纤毛门,砂纤目)

    Institute of Scientific and Technical Information of China (English)

    徐大鹏; 宋微波

    2005-01-01

    对采自青岛沿海的9属26种砂壳纤毛虫进行了形态学描述,其中11种为中国新纪录种:简单薄铃虫Leprotintinnus simplex Schmidt,1901,波特薄铃虫Leprotintinnus bottnicus(Nordqvist,1890)Jorgensen,1912,波罗的拟铃虫Tintinnopsis baltica Brandt,1896,长形拟铃虫Tintinnopsis elongata Daday,1887,盾形拟铃虫Tintinnopsis urnula Meunier,1910,弯叶拟铃虫Tintinnopsis lobiancoi Daday,1887,管状拟铃虫Tintinnopsis tubulosoides Meunier,1910,小拟铃虫Tintinnopsis minuta Wailes,1925,塔拉卡拟铃虫Favella taraikaensis Hada,1932,太平洋领细壳虫Stenosemella pacifica Kofoid et Campbell,1929和贪婪铃壳虫Codonella rapa Kofoid et Campbell,1929.

  13. Full-depth profiles of prokaryotes, heterotrophic nanoflagellates, and ciliates along a transect from the equatorial to the subarctic central Pacific Ocean

    Science.gov (United States)

    Sohrin, Rumi; Imazawa, Manabu; Fukuda, Hideki; Suzuki, Yoshimi

    2010-08-01

    Studies in epipelagic waters report higher heterotrophic microbial biomass in the productive high latitudes than in the oligotrophic low latitudes; however, biogeographical data are scarce in the deep ocean. To examine the hypothesis that the observed latitudinal differences in heterotrophic microbial biomass in the epipelagic zone also occur at depth, abundance and biomass of heterotrophic prokaryotes, nanoflagellates (HNF), and ciliates were determined at depths of 5-5000 m in the central Pacific between August and September of 2005. Heterotrophic microbial biomass increased from the tropical to the subarctic region over the full water column, with latitudinal differences in prokaryotic biomass increasing from 2.3-fold in the epipelagic zone to 4.4-fold in the bathypelagic zone. However, the latitudinal difference in HNF and ciliate biomass decreased with depth. In the mesopelagic zone, the vertical attenuation rate of prokaryotic abundance, which was calculated as the linear regression slope of log-log plot of abundance versus depth, ranged from -0.55 to -1.26 and was more pronounced (steeper slope) in the lower latitudes. In contrast, the vertical attenuation rate of HNF in the mesopelagic zone (-1.06 to -1.27) did not differ with latitude. In the subarctic, the attenuation rate of HNF was 1.7 times steeper than for prokaryotes. These results suggest the accumulation of prokaryotes in the deep subarctic Pacific, possibly due to low grazing pressure. Although the vertical attenuation rate of ciliates was steepest in the bathypelagic zone, HNF abundance did not further decrease at depths below 1000 m, except for at 2000 m where HNF was lowest across the study area. Ciliate abundance ranged 0.3-0.8 cells l -1 at 4000 m, and were below the detection limit (cells l -1) at 5000 m. To our knowledge, this study presents the first data for ciliates below 2000 m.

  14. [Physiological and biochemical activity of bacteria during germination of cucumber seeds and impact of ciliates Colpoda steinii on this process].

    Science.gov (United States)

    Chobotarova, V V; Bega, Z T; Kurdish, I K

    2015-01-01

    It is shown that the bacteria Bacillus subtilis B-7023 IMV produce indole-3-acetic acid and amino acids in the liquid medium Knoop. Processing cucumber seed suspension containing 10(7) cfu/ml as bacilli, and Azotobacter vinelandii IMV V-7076, resulted in a decrease in the length of the roots of plants. Reduction of bacterial load bacilli to 10(6) cfu/ml followed by reduction of indole-3-acetic acid in the medium, and to an increase in the length of roots, shoots and total plant mass. During the cultivation of Bacillus subtilis IMV V-7023 with ciliates Colpoda steinii reduced the amount of free forms of auxin in the medium to 5.5 times, and the related--to trace amounts. The content of histidine, phenylalanine, tyrosine, methionine and lysine significantly reduced. PMID:26036028

  15. The giant ciliate Zoothamnium niveum and its thiotrophic epibiont Candidatus Thiobios zoothamnicoli: a model system to study interspecies cooperation

    Directory of Open Access Journals (Sweden)

    Monika eBright

    2014-04-01

    Full Text Available Symbioses between chemoautotrophic sulfur-oxidizing (thiotrophic bacteria and protists or animals are among the most diverse and prevalent in the ocean. They are extremely difficult to maintain in aquaria and no thiotrophic symbiosis involving an animal host has ever been successfully cultivated. In contrast, we have cultivated the giant ciliate Zoothamnium niveum and its obligate ectosymbiont Cand. Thiobios zoothamnicoli in small flow-through aquaria. This review provides an overview of the host and the symbiont and their phylogenetic relationships. We summarize our knowledge on the ecology, geographic distribution and life cycle of the host, on the vertical transmission of the symbiont, and on the cultivation of this symbiosis. We then discuss the benefits and costs involved in this cooperation compared with other thiotrophic symbioses and outline our view on the evolution and persistence of this byproduct mutualism.

  16. The behaviour of both Listeria monocytogenes and rat ciliated ependymal cells is altered during their co-culture.

    Directory of Open Access Journals (Sweden)

    Mina J Fadaee-Shohada

    Full Text Available BACKGROUND: Ciliated ependymal cells line the cerebral ventricles and aqueducts separating the infected CSF from the brain parenchyma in meningitis. PRINCIPAL FINDINGS: Investigation of the interaction of Listeria monocytogenes with cultured rat brain ependymal cells showed that certain strains reduced the beat frequency of the cilia but all the strains studied significantly reduced the ciliary beat amplitude (the linear distance travelled by the tip of each cilium per beat cycle. CONCLUSION: The presence of the ependyma caused aggregation of some listeria strains and in some cases extracellular material also was seen in association with bacterial aggregates. These observations were dependent on the expression of genes required for invasion, intracellular survival and listerial cell to cell spread that are regulated by the transcriptional activator, positive regulatory factor A (PrfA.

  17. Directed Induction of Functional Multi-ciliated Cells in Proximal Airway Epithelial Spheroids from Human Pluripotent Stem Cells

    Directory of Open Access Journals (Sweden)

    Satoshi Konishi

    2016-01-01

    Full Text Available Multi-ciliated airway cells (MCACs play a role in mucociliary clearance of the lung. However, the efficient induction of functional MCACs from human pluripotent stem cells has not yet been reported. Using carboxypeptidase M (CPM as a surface marker of NKX2-1+-ventralized anterior foregut endoderm cells (VAFECs, we report a three-dimensional differentiation protocol for generating proximal airway epithelial progenitor cell spheroids from CPM+ VAFECs. These spheroids could be induced to generate MCACs and other airway lineage cells without alveolar epithelial cells. Furthermore, the directed induction of MCACs and of pulmonary neuroendocrine lineage cells was promoted by adding DAPT, a Notch pathway inhibitor. The induced MCACs demonstrated motile cilia with a “9 + 2” microtubule arrangement and dynein arms capable of beating and generating flow for mucociliary transport. This method is expected to be useful for future studies on human airway disease modeling and regenerative medicine.

  18. Complementary Notes on a‘Well-known' Marine Heterotrichous Ciliate, Folliculinopsis producta (Wright, 1859) Fraure-Fremiet,1936 (Protozoa, Ciliophora)

    Institute of Scientific and Technical Information of China (English)

    JI Daode; LIN Xiaofeng; SONG Weibo

    2004-01-01

    The living morphology and infraciliature of a heterotrichous ciliate, Folliculinopsis producta (Wright, 1859)Fraure-Fremiet, 1936, which was collected from the north coast of China, were investigated by in vivo observation and protargol impregnation techniques. As a new contribution, a redescription is presented: large Folliculinopsis of green to dark green in color, 800-1500μm in size; two peristomial lobes of approximately equal size, 300-400μm in length; adoral zone of membranelles containing about 1000 membranelles, lying along lobe margins and exhibiting two circles within buccal cavity;50-70 somatic kineties in mid-body; macronucleus miniliform, consisting of about 20 beads; lorica smooth, vase-shaped,(300 500)μm ×(90-130)μm in size, with 5-12 spiral ridges on neck tube; marine habitat.

  19. First Record and Redefinition of the Qingdao Population of Marine Ciliate Cardiostomatella vermiformis (Kahl, 1928) Corliss, 1960 (Protozoa, Ciliophora)

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The living morphology and infraciliature of a marine ciliate, Cardiostomatella vermiformis isolated from a sand beach of the Jiaozhou Bay near Qingdao, China, were investigated by live observation, protargol and silver carbonate impregnation methods. Both the morphological and morphometric data largely agree with former records. Based on the data obtained, an improved diagnosis for Cardiostomatella vermiformis is supplied: Large marine Cardiostomatella with cylindrical body shape and several prolonged caudal cilia; cells in vivo about (90-500)μm × (30-120)μm; macronucleus beaded; single contractile vacuole caudally positioned; buccal apparatus conspicuously small, genus typical; three to six postoral kineties; 96-130 somatic kineties. This species is recorded for the first time in China.

  20. Laminin-332 alters connexin profile, dye coupling and intercellular Ca2+ waves in ciliated tracheal epithelial cells

    Science.gov (United States)

    Isakson, Brant E; Olsen, Colin E; Boitano, Scott

    2006-01-01

    Background Tracheal epithelial cells are anchored to a dynamic basement membrane that contains a variety of extracellular matrix proteins including collagens and laminins. During development, wound repair and disease of the airway epithelium, significant changes in extracellular matrix proteins may directly affect cell migration, differentiation and events mediated by intercellular communication. We hypothesized that alterations in cell matrix, specifically type I collagen and laminin α3β3γ2 (LM-332) proteins within the matrix, directly affect intercellular communication in ciliated rabbit tracheal epithelial cells (RTEC). Methods Functional coupling of RTEC was monitored by microinjection of the negatively charged fluorescent dyes, Lucifer Yellow and Alexa 350, into ciliated RTEC grown on either a LM-332/collagen or collagen matrix. Coupling of physiologically significant molecules was evaluated by the mechanism and extent of propagated intercellular Ca2+ waves. Expression of connexin (Cx) mRNA and proteins were assayed by reverse transcriptase – polymerase chain reaction and immunocytochemistry, respectively. Results When compared to RTEC grown on collagen alone, RTEC grown on LM-332/collagen displayed a significant increase in dye transfer. Although mechanical stimulation of RTEC grown on either LM-332/collagen or collagen alone resulted in intercellular Ca2+ waves, the mechanism of transfer was dependent on matrix: RTEC grown on LM-332/collagen propagated Ca2+waves via extracellular purinergic signaling whereas RTEC grown on collagen used gap junctions. Comparison of RTEC grown on collagen or LM-332/collagen matrices revealed a reorganization of Cx26, Cx43 and Cx46 proteins. Conclusion Alterations in airway basement membrane proteins such as LM-332 can induce connexin reorganizations and result in altered cellular communication mechanisms that could contribute to airway tissue function. PMID:16884540

  1. Insights into the phylogeny of sporadotrichid ciliates (Protozoa, Ciliophora: Hypotricha) based on genealogical analyses of multiple molecular markers

    Institute of Scientific and Technical Information of China (English)

    HU Xiaoyan; HU Xiaozhong; Khaled A. S. AL-RASHEID; Saieh A. AL-FARRAJ; SONG Weibo

    2011-01-01

    The sporadotrichid ciliates are an especially diverse group. A number of investigators have studied the morphological, morphogenetic, and molecular relationships among members of this group. Despite this, a consistent classification is still lacking and several important questions about the phylogenetic relationships within this group remain unsolved. To improve our understanding of these relationships, we constructed phylogenetic trees using the nucleotide sequences of the small-subunit rRNA (SSrRNA) gene and amino acid sequences of actin I and -αtubulin. Analyses of SSrRNA gene sequences indicated that: 1) the Sporadotrichida sensu Lynn (2008) and the Oxytrichidae are polyphyletic; 2) the Uroleptus species, which are classified to urostylids, formed a sister group with the oxytrichids; 3) Halteria grandinella, which is grouped morphologically with oligotrich species, clustered within the oxytrichids. These results are congruent with previous studies based on SSrRNA gene sequences. However, the amino acid sequences of actin I and α-tubulin yielded different topologies. The main results are: 1) in all phylogenetic trees, the genus Oxylricha was paraphyletic; 2) Uroleptus was sister to a subset of Urostyla and Holosticha, albeit with low supporting values; 3) Halteria grandinella was separated distantly from the Oxytrichidae in trees inferred from actin I amino acid sequences but clustered with oligotrichids in the α-tubulin analysis. The inconsistency among the trees inferred from these different molecular markers may be caused by rapidly accumulated genetic characterizations of ciliates. Further studies with additional molecular markers and sampling of more taxa are expected to better address the relationships among sporadotrichids.

  2. Insights into the phylogeny of sporadotrichid ciliates (Protozoa, Ciliophora: Hypotricha) based on genealogical analyses of multiple molecular markers

    Science.gov (United States)

    Hu, Xiaoyan; Hu, Xiaozhong; Al-Rasheid, Khaled A. S.; Al-Farraj, Saleh A.; Song, Weibo

    2011-01-01

    The sporadotrichid ciliates are an especially diverse group. A number of investigators have studied the morphological, morphogenetic, and molecular relationships among members of this group. Despite this, a consistent classification is still lacking and several important questions about the phylogenetic relationships within this group remain unsolved. To improve our understanding of these relationships, we constructed phylogenetic trees using the nucleotide sequences of the small-subunit rRNA (SSrRNA) gene and amino acid sequences of actin I and α-tubulin. Analyses of SSrRNA gene sequences indicated that: 1) the Sporadotrichida sensu Lynn (2008) and the Oxytrichidae are polyphyletic; 2) the Uroleptus species, which are classified to urostylids, formed a sister group with the oxytrichids; 3) Halteria grandinella, which is grouped morphologically with oligotrich species, clustered within the oxytrichids. These results are congruent with previous studies based on SSrRNA gene sequences. However, the amino acid sequences of actin I and α-tubulin yielded different topologies. The main results are: 1) in all phylogenetic trees, the genus Oxytricha was paraphyletic; 2) Uroleptus was sister to a subset of Urostyla and Holosticha, albeit with low supporting values; 3) Halteria grandinella was separated distantly from the Oxytrichidae in trees inferred from actin I amino acid sequences but clustered with oligotrichids in the α-tubulin analysis. The inconsistency among the trees inferred from these different molecular markers may be caused by rapidly accumulated genetic characterizations of ciliates. Further studies with additional molecular markers and sampling of more taxa are expected to better address the relationships among sporadotrichids.

  3. Zygotic Expression of the Double-Stranded RNA Binding Motif Protein Drb2p Is Required for DNA Elimination in the Ciliate Tetrahymena thermophila ▿

    OpenAIRE

    Motl, Jason A.; Chalker, Douglas L.

    2011-01-01

    Double-stranded RNA binding motif (DSRM)-containing proteins play many roles in the regulation of gene transcription and translation, including some with tandem DSRMs that act in small RNA biogenesis. We report the characterization of the genes for double-stranded RNA binding proteins 1 and 2 (DRB1 and DRB2), two genes encoding nuclear proteins with tandem DSRMs in the ciliate Tetrahymena thermophila. Both proteins are expressed throughout growth and development but exhibit distinct peaks of ...

  4. Morphogenesis of respiratory syncytial virus in human primary nasal ciliated epithelial cells occurs at surface membrane microdomains that are distinct from cilia

    International Nuclear Information System (INIS)

    The distribution of cilia and the respiratory syncytial virus (RSV) nucleocapsid (N) protein, fusion (F) protein, attachment (G) protein, and M2-1 protein in human ciliated nasal epithelial cells was examined at between 1 and 5 days post-infection (dpi). All virus structural proteins were localized at cell surface projections that were distinct from cilia. The F protein was also trafficked into the cilia, and while its presence increased as the infection proceeded, the N protein was not detected in the cilia at any time of infection. The presence of the F protein in the cilia correlated with cellular changes in the cilia and reduced cilia function. At 5 dpi extensive cilia loss and further reduced cilia function was noted. These data suggested that although RSV morphogenesis occurs at non-cilia locations on ciliated nasal epithelial cells, RSV infection induces changes in the cilia body that leads to extensive cilia loss. - Highlights: • Respiratory syncytial virus (RSV) infects nasal ciliated epithelial cells. • Virus morphogenesis occurs within filamentous projections distinct from cilia. • The RSV N protein was not detected in the cilia at any time during infection. • Trafficking of the F protein into the cilia occurred early in infection. • Presence of the F protein in cilia correlated with impaired cilia function

  5. Morphogenesis of respiratory syncytial virus in human primary nasal ciliated epithelial cells occurs at surface membrane microdomains that are distinct from cilia

    Energy Technology Data Exchange (ETDEWEB)

    Jumat, Muhammad Raihan [School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551 (Singapore); Yan, Yan [Department of Otolaryngology, Yong Loo Lin School of Medicine, National University Health System, National University of Singapore, Singapore 119228 (Singapore); Ravi, Laxmi Iyer [School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551 (Singapore); Wong, Puisan [Detection and Diagnostics Laboratory, DSO National Laboratories, 27 Medical Drive, Singapore 117510 (Singapore); Huong, Tra Nguyen [School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551 (Singapore); Li, Chunwei [Department of Otolaryngology, Yong Loo Lin School of Medicine, National University Health System, National University of Singapore, Singapore 119228 (Singapore); Tan, Boon Huan [Detection and Diagnostics Laboratory, DSO National Laboratories, 27 Medical Drive, Singapore 117510 (Singapore); Wang, De Yun [Department of Otolaryngology, Yong Loo Lin School of Medicine, National University Health System, National University of Singapore, Singapore 119228 (Singapore); Sugrue, Richard J., E-mail: rjsugrue@ntu.edu.sg [School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551 (Singapore)

    2015-10-15

    The distribution of cilia and the respiratory syncytial virus (RSV) nucleocapsid (N) protein, fusion (F) protein, attachment (G) protein, and M2-1 protein in human ciliated nasal epithelial cells was examined at between 1 and 5 days post-infection (dpi). All virus structural proteins were localized at cell surface projections that were distinct from cilia. The F protein was also trafficked into the cilia, and while its presence increased as the infection proceeded, the N protein was not detected in the cilia at any time of infection. The presence of the F protein in the cilia correlated with cellular changes in the cilia and reduced cilia function. At 5 dpi extensive cilia loss and further reduced cilia function was noted. These data suggested that although RSV morphogenesis occurs at non-cilia locations on ciliated nasal epithelial cells, RSV infection induces changes in the cilia body that leads to extensive cilia loss. - Highlights: • Respiratory syncytial virus (RSV) infects nasal ciliated epithelial cells. • Virus morphogenesis occurs within filamentous projections distinct from cilia. • The RSV N protein was not detected in the cilia at any time during infection. • Trafficking of the F protein into the cilia occurred early in infection. • Presence of the F protein in cilia correlated with impaired cilia function.

  6. Can a fermentation gas mainly produced by rumen Isotrichidae ciliates be a potential source of biohydrogen and a fuel for a chemical fuel cell?

    Science.gov (United States)

    Piela, Piotr; Michałowski, Tadeusz; Miltko, Renata; Szewczyk, Krzysztof; Sikora, Radosław; Grzesiuk, Elzbieta; Sikora, Anna

    2010-07-01

    Bacteria, fungi and protozoa inhabiting the rumen, the largest chamber of the ruminants' stomach, release large quantities of hydrogen during the fermentation of carbohydrates. The hydrogen is used by coexisting methanogens to produce methane in energy-yielding processes. This work shows, for the first time, a fundamental possibility of using a hydrogen-rich fermentation gas produced by selected rumen ciliates to feed a low-temperature hydrogen fuel cell. A biohydrogen fuel cell (BHFC) was constructed consisting of (i) a bioreactor, in which a hydrogen-rich gas was produced from glucose by rumen ciliates, mainly of the Isotrichidae family, deprived of intra- and extracellular bacteria, methanogens, and fungi, and (ii) a chemical fuel cell of the polymer-electrolyte type (PEFC). The fuel cell was used as a tester of the technical applicability of the fermentation gas produced by the rumen ciliates for power generation. The average estimated hydrogen yield was ca. 1.15 mol H2 per mol of fermented glucose. The BHFC performance was equal to the performance of the PEFC running on pure hydrogen. No fuel cell poisoning effects were detected. A maximum power density of 1.66 kW/m2 (PEFC geometric area) was obtained at room temperature. The maximum volumetric power density was 128 W/m3 but the coulombic efficiency was only ca. 3.8%. The configuration of the bioreactor limited the continuous operation time of this BHFC to ca. 14 hours. PMID:20668402

  7. Estimation of divergence times in litostomatean ciliates (Ciliophora: Intramacronucleata), using Bayesian relaxed clock and 18S rRNA gene.

    Science.gov (United States)

    Vďačný, Peter

    2015-08-01

    The class Litostomatea comprises a diverse assemblage of free-living and endosymbiotic ciliates. To understand diversification dynamic of litostomateans, divergence times of their main groups were estimated with the Bayesian molecular dating, a technique allowing relaxation of molecular clock and incorporation of flexible calibration points. The class Litostomatea very likely emerged during the Cryogenian around 680 Mya. The origin of the subclass Rhynchostomatia is dated to about 415 Mya, while that of the subclass Haptoria to about 654 Mya. The order Pleurostomatida, emerging about 556 Mya, was recognized as the oldest group within the subclass Haptoria. The order Spathidiida appeared in the Paleozoic about 442 Mya. The three remaining haptorian orders evolved in the Paleozoic/Mesozoic periods: Didiniida about 419 Mya, Lacrymariida about 269 Mya, and Haptorida about 194 Mya. The subclass Trichostomatia originated from a spathidiid ancestor in the Mesozoic about 260 Mya. A further goal of this study was to investigate the impact of various settings on posterior divergence time estimates. The root placement and tree topology as well as the priors of the rate-drift model, birth-death process and nucleotide substitution rate, had no significant effect on calculation of posterior divergence time estimates. However, removal of calibration points could significantly change time estimates at some nodes. PMID:26204556

  8. Tissue mortality by Caribbean ciliate infection and white band disease in three reef-building coral species

    Science.gov (United States)

    Bastidas, Carolina; Croquer, Aldo

    2016-01-01

    Caribbean ciliate infection (CCI) and white band disease (WBD) are diseases that affect a multitude of coral hosts and are associated with rapid rates of tissue losses, thus contributing to declining coral cover in Caribbean reefs. In this study we compared tissue mortality rates associated to CCI in three species of corals with different growth forms: Orbicella faveolata (massive-boulder), O. annularis (massive-columnar) and Acropora cervicornis (branching). We also compared mortality rates in colonies of A. cervicornis bearing WBD and CCI. The study was conducted at two locations in Los Roques Archipelago National Park between April 2012 and March 2013. In A. cervicornis, the rate of tissue loss was similar between WBD (0.8 ± 1 mm/day, mean ± SD) and CCI (0.7 ± 0.9 mm/day). However, mortality rate by CCI in A. cervicornis was faster than in the massive species O. faveolata (0.5 ± 0.6 mm/day) and O. annularis (0.3 ± 0.3 mm/day). Tissue regeneration was at least fifteen times slower than the mortality rates for both diseases regardless of coral species. This is the first study providing coral tissue mortality and regeneration rates associated to CCI in colonies with massive morphologies, and it highlights the risks of further cover losses of the three most important reef-building species in the Caribbean. PMID:27547525

  9. Molecular phylogeny and species delimitation within the ciliate genus Spirostomum (Ciliophora, Postciliodesmatophora, Heterotrichea), using the internal transcribed spacer region.

    Science.gov (United States)

    Shazib, Shahed Uddin Ahmed; Vďačný, Peter; Kim, Ji Hye; Jang, Seok Won; Shin, Mann Kyoon

    2016-09-01

    Morphological and molecular delimitation of Spirostomum species is currently under debate. We addressed species boundaries within the genus Spirostomum, using the ITS1-5.8S-ITS2 region and the secondary structure of the ITS2 molecule, and 18S and 28S (D1D2) sequences additionally. The Spirostomum ITS region is among the shortest within the ciliates hitherto studied. The Spirostomum ITS2 molecule matches the "ring model", but exhibits only two helices radiating from a common loop. According to comparative analyses, they very likely correspond to helices II and III of other eukaryotes. Our phylogenetic analyses of the ITS region revealed a complex genealogical structure within the genus Spirostomum. However, boundaries among Spirostomum species could not be unambiguously determined either by phylogenetic trees, networks or sequence divergence cutoffs, because ITS2 sequences transcended species boundaries of the following morphospecies: S. ambiguum, S. minus, S. subtilis and S. teres. According to molecular diversity analysis, this is very likely caused by polymorphism in S. minus and S. teres, and by the lack of variability in S. ambiguum and S. subtilis. No compensatory base changes (CBCs) were detected in helices of the ITS2 molecule between different Spirostomum species, documenting that CBC analysis per se is not able to effectively discriminate Spirostomum species. PMID:27261253

  10. Estimation of divergence times in litostomatean ciliates (Ciliophora: Intramacronucleata), using Bayesian relaxed clock and 18S rRNA gene.

    Science.gov (United States)

    Vďačný, Peter

    2015-08-01

    The class Litostomatea comprises a diverse assemblage of free-living and endosymbiotic ciliates. To understand diversification dynamic of litostomateans, divergence times of their main groups were estimated with the Bayesian molecular dating, a technique allowing relaxation of molecular clock and incorporation of flexible calibration points. The class Litostomatea very likely emerged during the Cryogenian around 680 Mya. The origin of the subclass Rhynchostomatia is dated to about 415 Mya, while that of the subclass Haptoria to about 654 Mya. The order Pleurostomatida, emerging about 556 Mya, was recognized as the oldest group within the subclass Haptoria. The order Spathidiida appeared in the Paleozoic about 442 Mya. The three remaining haptorian orders evolved in the Paleozoic/Mesozoic periods: Didiniida about 419 Mya, Lacrymariida about 269 Mya, and Haptorida about 194 Mya. The subclass Trichostomatia originated from a spathidiid ancestor in the Mesozoic about 260 Mya. A further goal of this study was to investigate the impact of various settings on posterior divergence time estimates. The root placement and tree topology as well as the priors of the rate-drift model, birth-death process and nucleotide substitution rate, had no significant effect on calculation of posterior divergence time estimates. However, removal of calibration points could significantly change time estimates at some nodes.

  11. Morphology and morphogenesis of a new marine cyrtophorid ciliate, Hartmannula sinica nov. spec. (Protozoa, Ciliophora, Cyrtophorida) from China.

    Science.gov (United States)

    Shao, Chen; Song, Weibo; Gong, Jun

    2008-02-01

    The living morphology, infraciliature and morphogenesis of a new marine cyrtophorid ciliate, Hartmannula sinica nov. spec., collected from Qingdao, north China, have been investigated. The new species is characterized by: size in vivo 90-130 x 40-50 microm, body long elliptical in outline, cilium-free field covered with a conspicuous alveolar layer; 24-31 ventral kineties, the rightmost 6-9 of which extend apically; 20-24 nematodesmal rods; about 15 sparsely distributed contractile vacuoles; a yellowish pigment spot is always present near the anterior tip of the cell. Morphogenetic events exhibit a pattern, which is homologous with that of related cyrtophorids. The main features are as follows: (1) preoral and circumoral kineties of opisthe develop from the oral primordium that forms in mid-body from sections of 3 postoral kineties, while parental preoral and circumoral kineties are retained; (2) parental cytostome and nematodesmal rods are resorbed in middle divisional stages and then replaced by newly formed structures; (3) the heteromerous macronucleus unifies in the late divisional stage.

  12. Notes on Two Marine Ciliates from the Yellow Sea, China: Placus salinus and Strombidium apolatum (Protozoa, Ciliophora)

    Institute of Scientific and Technical Information of China (English)

    XU Dapeng; SONG Weibo; HU Xiaozhong

    2005-01-01

    The living morphology and infraciliature of two rare marine ciliates, Placus salinus Dietz, 1964 and Strombidium apolatum Wilbert and Song, 2005, collected from the coastal waters near Qingdao, China, were investigated by in vivo observation and protargol impregnation technique. The improved diagnosis for Placus salinus is as follows: medium-sized marine Placus, in vivo (50 -60) μm × (30 -40)μm; cell elliptical to barrel-shaped; 28 -31 somatic kineties; single macronucleus usually ellipsoid and one micronucleus located in the indention of the macronucleus; one contractile vacuole posteriorly positioned. Strombidium apolatum is characterized by: marine strombidium (40-60) μm × (30-45) μm in vivo, cordiform in shape with somewhat pointed posterior end and conspicuous apical protrusion; extrusomes prominent, about 15μm in length and evenly arranged along the circle kinety; about 16 collar and 5-6 buccal membranelles; one elongate macronucleus and one micronucleus; circle and ventral kineties consisting of about 53 and 45 dikinetids respectively.

  13. Infraciliature and morphogenesis in three rumen Diplodinium ciliates, Diplodinium polygonale, Diplodinium leche, and Diplodinium nanum, observed by light microscopy.

    Science.gov (United States)

    Ito, Akira; Imai, Soichi

    2005-01-01

    Infraciliature and morphogenesis of three rumen ophryoscolecid ciliates, Diplodinium polygonale Dogiel, 1925, Diplodinium leche Imai et al., 1992, and Diplodinium nanum Imai, 1988, are described from pyridinated silver carbonate-impregnated specimens. These three species have two polybrachykineties in the buccal area and a polybrachykinety in the dorsal ciliary zone. The vestibular polybrachykinety (VP) of D. polygonale and D. leche arises from the dorsal extremity of the adoral polybrachykinety (AP) as in Entodinium species, extending toward the left in D. polygonale and toward the left posterior in D. leche. The VP of D. nanum arises from the inner side of the AP, separate from its dorsal extremity, as in other Diplodinium species and extends toward the left posterior. These series of the polybrachykinety arrangements in D. polygonale, D. leche, and D. nanum can be regarded as transitional forms in the evolution of an Entodinium-like ancestor to Diplodinium. Morphogenesis of these three Diplodinium species is not different from that of other Diplodinium species.

  14. Two New Genera of Planktonic Ciliates and Insights into the Evolution of the Family Strombidiidae (Protista, Ciliophora, Oligotrichia.

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    Weiwei Liu

    Full Text Available Oligotrich ciliates are common marine microplankters, but their biodiversity and evolutionary relationships have not been well-documented. Morphological descriptions and small subunit rRNA gene sequences of two new species representing two new strombidiid genera, Sinistrostrombidium cupiformum gen. nov., sp. nov. and Antestrombidium agathae gen. nov., sp. nov. are presented, and their taxonomy and molecular phylogeny are analyzed. Sinistrostrombidium gen. nov. is characterized by a sinistrally spiraled girdle kinety and a longitudinal ventral kinety. Antestrombidium gen. nov. is distinguished by tripartite somatic kineties (circular and ventral kineties plus dextrally spiraled girdle kinety. Sinistrostrombidium and Antestrombidium branched separately from one another in phylogenetic trees, clustering with different clades of strombidiids. The new genera added to the diversities of ciliary patterns and small subunit rRNA gene sequences in strombidiids leads to presentation of a new hypothesis about evolution of the 12 known strombidiid genera, based on ciliary pattern and partly supported by molecular evidence. In addition, our new morphological and molecular analyses support establishment of a new order Lynnellida ord. nov., characterized by an open adoral zone of membranelles without differentiation of anterior and ventral membranelles, for Lynnella, but we remain unable to assign the genus to a subclass with confidence.

  15. Tissue mortality by Caribbean ciliate infection and white band disease in three reef-building coral species.

    Science.gov (United States)

    Verde, Alejandra; Bastidas, Carolina; Croquer, Aldo

    2016-01-01

    Caribbean ciliate infection (CCI) and white band disease (WBD) are diseases that affect a multitude of coral hosts and are associated with rapid rates of tissue losses, thus contributing to declining coral cover in Caribbean reefs. In this study we compared tissue mortality rates associated to CCI in three species of corals with different growth forms: Orbicella faveolata (massive-boulder), O. annularis (massive-columnar) and Acropora cervicornis (branching). We also compared mortality rates in colonies of A. cervicornis bearing WBD and CCI. The study was conducted at two locations in Los Roques Archipelago National Park between April 2012 and March 2013. In A. cervicornis, the rate of tissue loss was similar between WBD (0.8 ± 1 mm/day, mean ± SD) and CCI (0.7 ± 0.9 mm/day). However, mortality rate by CCI in A. cervicornis was faster than in the massive species O. faveolata (0.5 ± 0.6 mm/day) and O. annularis (0.3 ± 0.3 mm/day). Tissue regeneration was at least fifteen times slower than the mortality rates for both diseases regardless of coral species. This is the first study providing coral tissue mortality and regeneration rates associated to CCI in colonies with massive morphologies, and it highlights the risks of further cover losses of the three most important reef-building species in the Caribbean. PMID:27547525

  16. Pequenas Parmelia S.L. (Líquens: Ascomycotina ciliadas dos cerrados brasileiros Little ciliate Parmeliae in the brazilian cerradoes

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    Marcelo Pinto Marcelli

    1993-12-01

    Full Text Available Este trabalho foi baseado em coletas realizadas em todos os tipos estruturais de cerrado, incluindo formações de altitude e rochosas. São apresentadas descrições detalhadas, chave de identificação e ilustrações das espécies de Bulboíhrix (16, Relicina (2, Myelochroa (2, Parmelinella (1, Parmelinopsis (6 e Hypotrachyna (3 encontradas. B. linteolocarpa M.P. Marcelli e B. subklementii M.P. Marcelli são descritas como novas. E feita a combinação nova Parmelinella versiformis (Kremp. M.P. Marcelli. B. sensibilis (Steiner & Zahlbr. Hale é nova para o Brasil. B. meizospora (Nyl. Hale e Parmelinopsis jamesii (Hale Elix & Hale são novas para o Continente Americano. Há um grande número de primeiras citações para vários estados e várias segundas referências para o Brasil.This work deals with species of the lichen genera Bulboihrix (16, Relicina (2, Myelochroa (2, Parmelinella (1, Parmelinopsis (6 and Hypotrachyna (3 (ciliate species growing in the brazilian "cerrado" vegetation. All types of cerradoes were investigated, since almost open fields to forestal formations and including altitude rock fields, gallery forests and others placed inside cerrado areas. Altogether 30 species were found and are described in detail. B. linteolocarpa M.P. Marcelli and B. subklementii M.P. Marcelli are new species. The new combination Parmelinella versiformis (Kremp. M.P. Marcelli is done. B. sensibilis (Steiner & Zahlbr. Hale is new for Brazil. B. meizospora (Nyl. Hale and Parmelinopsis jamesii (Hale Elix & Hale are new for the American Continent.

  17. Ciliated protists from the nepheloid layer and water column of sites affected by the Deepwater Horizon oil spill in the Northeastern Gulf of Mexico

    Science.gov (United States)

    Moss, Joseph A.; McCurry, Chelsea; Tominack, Sarah; Romero, Isabel C.; Hollander, David; Jeffrey, Wade H.; Snyder, Richard A.

    2015-12-01

    Benthic marine protists have been well documented from shallow marine benthic habitats but remain understudied in deeper habitats on continental shelves and slopes, particularly in the Northeastern Gulf of Mexico (NEGOM). This region was affected by a deep water oil well failure (BP-Deepwater Horizon, 2010). The combination of a lack of information on deep sea microbenthic communities and the potential for benthic microbial petroleum mineralization prompted this investigation. Water column and nepheloid layer samples were obtained via Niskin bottles and a multicorer respectively at stations across the NEGOM to: (1) determine whether nepheloid and water column communities are distinct and (2) assess benthic species richness relative to sediment PAH contamination. Phylum specific 18S rRNA gene amplification was used to construct clone libraries of ciliate assemblages. BLAST searches in the NCBI database indicated that a majority (~75%) of the clone sequences corresponded (94-100% similarity) with listed, yet unclassified sequences. Several putative species were common at most site locations and depths. Many known benthic ciliates, such as Uronychia transfuga, Uronychia setigera, and Spirotrachelostyla tani, were common in the nepheloid layer samples and not recovered in water column samples. Ciliated protist species richness increased with PAH levels found in surface sediments, suggesting a positive microbial response to petroleum enrichment of the benthos. The presence of previously unknown microbenthic communites in the nephaloid layer over oceanic clay-silt muds alters our view of microbial processes in the deep sea and merits investigation of the microbial processes and rates of microbial mineralization and biomass production important to global biogeochemistry.

  18. Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27 nt small RNAs derived from the parental macronucleus.

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    Alan M Zahler

    Full Text Available Ciliated protozoans possess two types of nuclei; a transcriptionally silent micronucleus, which serves as the germ line nucleus, and a transcriptionally active macronucleus, which serves as the somatic nucleus. The macronucleus is derived from a new diploid micronucleus after mating, with epigenetic information contributed by the parental macronucleus serving to guide the formation of the new macronucleus. In the stichotrichous ciliate Oxytricha trifallax, the macronuclear DNA is highly processed to yield gene-sized nanochromosomes with telomeres at each end. Here we report that soon after mating of Oxytricha trifallax, abundant 27 nt small RNAs are produced that are not present prior to mating. We performed next generation sequencing of Oxytricha small RNAs from vegetative and mating cells. Using sequence comparisons between macronuclear and micronuclear versions of genes, we found that the 27 nt RNA class derives from the parental macronucleus, not the developing macronucleus. These small RNAs are produced equally from both strands of macronuclear nanochromosomes, but in a highly non-uniform distribution along the length of the nanochromosome, and with a particular depletion in the 30 nt telomere-proximal positions. This production of small RNAs from the parental macronucleus during macronuclear development stands in contrast to the mechanism of epigenetic control in the distantly related ciliate Tetrahymena. In that species, 28-29 nt scanRNAs are produced from the micronucleus and these micronuclear-derived RNAs serve as epigenetic controllers of macronuclear development. Unlike the Tetrahymena scanRNAs, the Oxytricha macronuclear-derived 27 mers are not modified by 2'O-methylation at their 3' ends. We propose models for the role of these "27macRNAs" in macronuclear development.

  19. Ciliates (Protozoa from dried sediments of a temporary pond from Argentina Ciliados (Protozoa de sedimentos secos de una charca temporaria de la Argentina

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    Gabriela Cristina Küppers

    2009-12-01

    Full Text Available Temporary ponds represent special environments that are inhabited by organisms adapted to changing environmental conditions. Ciliates are able to survive complete loss of water in these transient habitats through cyst formation. However, ciliates from the Neotropical region in general have been poorly studied with modern techniques. The main goal of this study is to describe the ciliates in dried sediments of a temporary pond from Buenos Aires Province, Argentina, through sampling efforts that were performed 2003-2005. Soil samples were obtained during drought phases and re wetted in laboratory to establish raw and enriched cultures. Ciliates were then studied both in vivo and after impregnation with protargol. In this study, we present 4 new records for Argentina (Gonostomum affine (Stein, 1859 Sterki, 1878, Stylonychia bifaria (Stokes, 1887 Berger, 1999, Pleurotricha lanceolata (Ehrenberg, 1835 Stein, 1859, Meseres corlissi Petz and Foissner, 1992, 1 for South America (Blepharisma americanum (Suzuki, 1954 Hirshfield, Isquith and Bhandary, 1965, and 2 for the Neotropical Realm (Gonostomum strenuum (Engelmann, 1862 Sterki, 1878, Stylonychia lemnae Ammermann and Schlegel, 1983.Los cuerpos de agua temporarios son ambientes particulares que se encuentran habitados por organismos adaptados a condiciones fluctuantes. Los ciliados son capaces de sobrevivir a la pérdida completa de agua del ambiente gracias a la formación de estructuras de resistencia. Por otra parte, los ciliados de la región Neotropical han sido poco investigados con técnicas modernas. El objetivo de este estudio es referir los ciliados que se desarrollaron a partir de los sedimentos secos de una charca temporaria de la provincia de Buenos Aires, Argentina, en la que se realizaron muestreos durante el período 2003-2005. Las muestras de suelo fueron obtenidas durante las fases de sequía y luego resuspendidas en el laboratorio para realizar cultivos naturales y enriquecidos. Los

  20. Identification of cAMP-dependent phosphorylated proteins involved in the formation of environment-resistant resting cysts by the terrestrial ciliate Colpoda cucullus

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    Y Sogame

    2014-07-01

    Full Text Available In the terrestrial ciliate Colpoda cucullus, an elevation of the intracellular cAMP concentration was reported to be involved in environment-resistant resting cyst formation. In the present study, cAMP-dependently phosphorylated proteins of encystment-induced C. cucullus were isolated with Phos-tag agarose phosphate-affinity beads and subsequent SDS-PAGE. In a liquid chromatography/tandem mass spectrometry analysis of these phosphoproteins, 27-, 37- and 43-kDa proteins (p27, p37 and p43 were identified as Rieske iron-sulfur protein, histone H4 (hyperacetylated form, and actin, respectively.

  1. Phylogenetic positions of two marine ciliates, Metanophrys similis and Pseudocohnilembus hargisi (Protozoa, Ciliophora, Scuticociliatia), inferred from complete small subunit rRNA gene sequences

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    The small subunit rRNA (SSrRNA) gene was sequenced for two marine scuticociliates Metanophrys similis and Pseudocohnilembus hargisi. The results show that this gene comprises 1763 and 1753 nucleotides in the two marine ciliates respectively.Metanophrys similis is phylogenetically closely related to the clade containing Mesanophrys carcini and Anophyroides haemophila, which branches basally to other species within the order Philasterida. Pseudocohnilembus hargisi groups with its congener, P. marinus, with strong bootstrap support. Paranophrys magna groups with the clade including Cohnilembus and Uronema, representing a sister clade to that containing the two Pseudocohnilembus species.

  2. Morphology, morphogenesis and gene sequence of a freshwater ciliate, Pseudourostyla cristata (Ciliophora, Urostyloidea) from the ancient Lake Biwa, Japan.

    Science.gov (United States)

    Chen, Xumiao; Li, Zicong; Hu, Xiaozhong; Kusuoka, Yasushi

    2010-01-01

    The urostyloid freshwater ciliate Pseudourostyla cristata was recorded for the first time from Lake Biwa, a 4-million-year-old lake located in Shiga Prefecture, Japan. Its morphology and morphogenesis were investigated using live observation and protargol impregnation, and the SSU ribosomal RNA gene was sequenced. Based on the current observations and previous descriptions, this species is readily recognized mainly by the following characters: body slender or broadly oval to elliptical, and dark grey in color; size in vivo about 170-400 x 40-150 microm; pellicle flexible and contractile, with extrusomes forming a hyaline seam underneath; ciliature comprising about 60-130 adoral membranelles, usually 1 buccal cirrus, 20-24 frontal, 2 frontoterminal, 17-26 pairs of midventral, and 5-16 transverse cirri, 4-6 left and 4-5 right marginal rows, and 8-10 dorsal kineties; 15-83 macronuclear nodules and 2-9 micronuclei; freshwater habitat. The main morphogenetic developments are: (1) the oral primordium for the proter originates de novo on the dorsal wall of the buccal cavity, and the dedifferentiated undulating membranes and some parental proximal membranelles join in the primordial development; the old adoral zone will be partly replaced by new structures; (2) the oral primordium for the opisthe occurs epiapokinetally left of the midventral complex between the adoral zone and the transverse cirri; (3) the fronto-midventral transverse cirral (FVT) anlagen develop separately in both dividers by dedifferentiation of most of the midventral cirri; (4) the single buccal cirrus is generated from the posterior end of FVT anlage II; (5) the leftmost frontal cirrus is derived from the anterior end of the undulating membranes anlage (FVT anlage I); (6) the marginal rows of each side are formed from a single anlage which arises within the rightmost row; (7) the dorsal kineties develop by intrakinetal basal body proliferation; and (8) the most posterior FVT anlage contributes the two

  3. Ultrastructure observation on the cells at different life history stages of Cryptocaryon irritans (Ciliophora: Prostomatea), a parasitic ciliate of marine fishes.

    Science.gov (United States)

    Ma, Rui; Ni, Bing; Fan, Xinpeng; Warren, Alan; Yin, Fei; Gu, Fukang

    2016-09-01

    Cells of Cryptocaryon irritans at different life history stages were studied using both light and electron microscopy. The characteristics of several organelles were revealed for the first time at the ultrastructural level. It was confirmed that the cytostome of trophonts, protomonts and theronts was surrounded by cilium-palp triplets rather than ciliary triplets. The nematodesmata underlying the circumoral dikinetids were single bundles, whereas these were always paired in Prorodontids. Toxicysts were present in late-stage tomonts and theronts, but were absent in trophonts and protomonts. We posited that toxicysts might play a role in infection and invasion of host-fish tissue by theronts. The adoral brosse was unlike that of any other family of the class Prostomatea based on its location and morphology. Membranous folds were present in trophonts, protomonts and theronts. These folds were longer and more highly developed in C. irritans than in exclusively free-living prostome ciliates suggesting that they might be linked to parasitism in C. irritans. Trophonts, protomonts and theronts had multiple contractile vacuoles. The basic ultrastructure of the contractile vacuole of C. irritans was similar to that of other kinetofragminophoran ciliates. They might play different roles in different stages of the life cycle since their ultrastructure varied among trophonts, protomonts and theronts. PMID:27460894

  4. Separate Culture and Morphological Observation of Free Living Amoebae and Ciliates%自生阿米巴和纤毛虫的分离培养与观察

    Institute of Scientific and Technical Information of China (English)

    岳爱梅; 刘营; 谭叶; 丛慧; 林佳慧; 张英杰; 张忠广

    2013-01-01

    Objective To study the methods of cultivation and morphological observation of free living amoebae and ciliates and observe the growth and species change of parasites in different time and vegetables. Methods Various green vegetable juice were prepared for cultivating the amoebae and ciliates at 37℃ The growth of free living amoebae and ciliates were observed using microscope. Results Rotary motion of ciliates was observed after cultivation for 48 hours.Decreased quantity and activity of ciliates and increased quantity and activity of free living amoebae were observed after cultivation for 72 hours. Decreased quantity of free living amoebae and ciliates were observed even disappeared but the cysts appeared after cultivation for 144 hours. And various green vegetable juice showed differences in culturing the amoebae and ciliates; between 72 h to 120 h ciliates could be found in celery juice, while free living amoebae were found between 96 h to 120 h. Ciliates could be easier to observe in rape flower juice between 72 h to 96h and free living amoebae easier to see in caraway juice between 72 h to 120 h. Conclusion This method is simple and convenient to observe the living amoebae and ciliates. It is useful in the parasitology teaching.%目的 研究建立自生阿米巴和纤毛虫的培养方法,观察不同菜种在不同时间寄生虫的生长情况及种类的变化.方法 制作不同蔬菜叶的悬液,37℃恒温培养,镜下观察不同时间自生阿米巴和纤毛虫的生长情况.结果 培养48 h后,可观察到纤毛虫活跃的旋转运动;72 h后纤毛虫数量减少,活动度降低,自生阿米巴出现,蠕动活跃;144 h后自生阿米巴、纤毛虫数量减少甚至观察不到,包囊出现,不同菜种在不同时间自生阿米巴、纤毛虫数量、种类也相应变化,如芹菜中纤毛虫在72~120 h、阿米巴在96~120 h数量最多,最易观察到,油菜中纤毛虫在72~96 h最易观察到,香菜中阿米巴在72~120 h

  5. A case study for effects of operational taxonomic units from intracellular endoparasites and ciliates on the eukaryotic phylogeny: phylogenetic position of the haptophyta in analyses of multiple slowly evolving genes.

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    Hisayoshi Nozaki

    Full Text Available Recent multigene phylogenetic analyses have contributed much to our understanding of eukaryotic phylogeny. However, the phylogenetic positions of various lineages within the eukaryotes have remained unresolved or in conflict between different phylogenetic studies. These phylogenetic ambiguities might have resulted from mixtures or integration from various factors including limited taxon sampling, missing data in the alignment, saturations of rapidly evolving genes, mixed analyses of short- and long-branched operational taxonomic units (OTUs, intracellular endoparasite and ciliate OTUs with unusual substitution etc. In order to evaluate the effects from intracellular endoparasite and ciliate OTUs co-analyzed on the eukaryotic phylogeny and simplify the results, we here used two different sets of data matrices of multiple slowly evolving genes with small amounts of missing data and examined the phylogenetic position of the secondary photosynthetic chromalveolates Haptophyta, one of the most abundant groups of oceanic phytoplankton and significant primary producers. In both sets, a robust sister relationship between Haptophyta and SAR (stramenopiles, alveolates, rhizarians, or SA [stramenopiles and alveolates] was resolved when intracellular endoparasite/ciliate OTUs were excluded, but not in their presence. Based on comparisons of character optimizations on a fixed tree (with a clade composed of haptophytes and SAR or SA, disruption of the monophyly between haptophytes and SAR (or SA in the presence of intracellular endoparasite/ciliate OTUs can be considered to be a result of multiple evolutionary reversals of character positions that supported the synapomorphy of the haptophyte and SAR (or SA clade in the absence of intracellular endoparasite/ciliate OTUs.

  6. Rumen ciliates in the African (Cape) buffalo (Syncerus caffer caffer) living in the vicinity of the Orpen Gate entrance into Kruger National Park, South Africa.

    Science.gov (United States)

    Booyse, Dirk G; Dehority, Burk A; Reininghaus, Björn

    2014-07-31

    Samples of rumen contents were obtained from 10 African (Cape) buffalo living in the vicinity of the Orpen Gate entrance into Kruger National Park in South Africa. Total number of ciliate protozoa per animal ranged from 3.15 to 23.25 x 103. Forty three different species and forms were observed, of which 35 are a new host record. The total number of species and forms per animal varied from 10 to 17. Eudiplodinium maggii occurred in all 10 animals, followed by Dasytricha ruminantium in nine animals. Diplodinium posterovesiculatum, Eudiplodinium magnodentatum and Ostracodinium mammosum were present in seven animals with all other species and forms occurring in five or less animals. 

  7. Biomonitoring of Lake Garda: Identification of ciliate species and symbiotic algae responsible for the "black-spot" bloom during the summer of 2004.

    Science.gov (United States)

    Pucciarelli, Sandra; Buonanno, Federico; Pellegrini, Giovanna; Pozzi, Sabrina; Ballarini, Patrizia; Miceli, Cristina

    2008-06-01

    At the end of July 2004, a "black-spot" appeared in the western portion of Lake Garda, an oligomictic lake classified as meso-oligotrophic. A few days later, this phenomenon spread throughout the lake. A first analysis by optical microscopy revealed that the origin of the black spot was a ciliated protozoan. Ciliates represent a small percentage of the total zooplanktonic community of Lake Garda and have never produced bloom episodes. Using morphological and molecular analysis, we characterized the protozoan responsible for the bloom as Stentor amethystinus and its symbiotic algae as a Chlorella sp. Continuous monitoring of the northeast of Lake Garda showed that the apex of the S. amethystinus bloom took place during the first 20 days of August, and the highest density of S. amethystinus occurred in the euphotic zone. During this period, high chlorophyll a values were obtained in water samples collected from the euphotic zone due to the presence of the endosymbiont Chlorella. After early September, the black spot completely disappeared, and the causative organism was detected at low concentration only in the southern basin of the lake. The results obtained on the progress of the black spot phenomenon led us to hypothesize that: (i) S. amethystinus was recently introduced in Lake Garda by anthropogenic activities or it was already a member of the zooplanktonic community but at a very low concentration; (ii) S. amethystinus blooms may have been driven by an unusual high availability of total phosphorous in the euphotic zone and (iii) Lake Garda is not the preferred habitat for S. amethystinus.

  8. Effect of high levels of the rotifer Lecane inermis on the ciliate community in laboratory-scale sequencing batch bioreactors (SBRs).

    Science.gov (United States)

    Fyda, Janusz; Babko, Roman; Fiałkowska, Edyta; Pajdak-Stós, Agnieszka; Kocerba-Soroka, Wioleta; Sobczyk, Mateusz; Sobczyk, Łukasz

    2015-10-01

    Due to its ability to feed on filamentous bacteria, the rotifer Lecane inermis has already been recognized as a potential control agent of activated sludge bulking, which is usually caused by the excessive growth of filamentous microorganisms. However, their effectiveness depends, in part, on their abundance. We studied the influence of high densities of L. inermis on the protozoan community in activated sludge from a wastewater treatment plant (WWTP) in 4 laboratory-scale sequencing batch bioreactors (SBRs). Two treatments and two controls were subjected to nutrient removal system in process similar to that used in a WWTP. The experiment lasted 9 days and was repeated in 24-h cycles, including phases of agitation with feeding, aeration and agitation and sedimentation with decantation at the end of the cycle. In total, 32 taxa were identified, among which 25 were ciliated protozoa, 4 were amoebae, 2 were flagellates, and one was a nematode. Rotifers were then introduced to 2 bioreactors at a final concentration of 500ind.mL(-1), and the taxonomic composition and abundance of the activated sludge microfauna were assessed 2, 5 and 8 days thereafter. The mean density of ciliates on the first day of experiment was 12,610ind.mL(-1) and diminished to 4868±432ind.mL-±432ind.mL(-1) in the control and 5496±638ind.mL(-1) in the rotifer-treated group on the last day. Thus, even extremely high densities of artificially introduced rotifers did not negatively affect the protozoan community. On the contrary, the protozoan community was more diverse in the treatment group than in the control.

  9. 施肥对围隔中浮游纤毛虫种群动态的调控分析%Study on Fertilization to the Population Dynamics of Planktonic Ciliates in Low Salinity Control Enclosures

    Institute of Scientific and Technical Information of China (English)

    黄斌; 查广才

    2011-01-01

    The community structure and population dynamics of planktonic ciliates in controlled enclosure environment at low salinity levels were studied and analyzed.A total of 48 planktonic ciliates species were indentified,belonged to 3 classes,11 orders and 37 genera,including 8 species of oligotrichida,7 species of peritrichida,and 6 species of hypotrichida and scuticociliatida among them.The dominant species mostly enjoyed living in eutrophic water or were pollution-resistant species.Different treatment had significant effects on the community structure and population dynamics of planktonic ciliates.The proper fertilizer volume and of organic fertilizer and chemical fertilizer matches executes of 5 tank enclosures,and apply merchandise compound fertilizers alone of No.7 enclosures and No.9 enclosures,the planktonic ciliates species more abundant and with an average of 6.7 species of detectd each time,the population densities were 112.30,91.15 and 111.00 cells/mL,respectively.In the enclosure applied with organic fertilizer,the planktonic ciliates appeared earlier,the ciliates addicted to eutrophic water were the dominant species.The densities were lower in early and late periods and higher in intermediate period of planktonic ciliates and planktonic algae,and the diversity of planktonic ciliates of early and late periods was lower and intermediate period was higher,while that of planktonic algae was negative.The study provided the theoretical bases for healthy culture and ecological regulation and management of prawns.%通过不同的施肥处理,对低盐度对虾养殖围隔环境中浮游纤毛虫群落结构动态变化进行了研究,共检测到浮游纤毛虫48种,分属于3纲、11目、37属;其中,寡毛目(Oligotrichida)8种,缘毛目(Peritrichida)7种,腹毛目(Hypotrichida)和盾纤目(Scuticociliatida)均为6种;优势种多为富营养化水体中的耐污性种类。不同施肥处理对纤毛虫的种群结构与动态变化影响显

  10. Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control

    OpenAIRE

    Coyne, Robert S; Hannick, Linda; Shanmugam, Dhanasekaran; Jessica B Hostetler; Brami, Daniel; Joardar, Vinita S; Johnson, Justin; Radune, Diana; Singh, Irtisha; Jonathan H Badger; Kumar, Ujjwal; Saier, Milton; Wang, Yufeng; Cai, Hong; Gu, Jianying

    2011-01-01

    BACKGROUND: Ichthyophthirius multifiliis, commonly known as Ich, is a highly pathogenic ciliate responsible for 'white spot', a disease causing significant economic losses to the global aquaculture industry. Options for disease control are extremely limited, and Ich's obligate parasitic lifestyle makes experimental studies challenging. Unlike most well-studied protozoan parasites, Ich belongs to a phylum composed primarily of free-living members. Indeed, it is closely related to the model org...

  11. Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control

    OpenAIRE

    Coyne, Robert S; Hannick, Linda; Shanmugam, Dhanasekaran; Jessica B Hostetler; Brami, Daniel; Joardar, Vinita S; Johnson, Justin; Radune, Diana; Singh, Irtisha; Jonathan H Badger; Kumar, Ujjwal; Saier, Milton; Wang, Yufeng; Cai, Hong; Gu, Jianying

    2011-01-01

    Background Ichthyophthirius multifiliis, commonly known as Ich, is a highly pathogenic ciliate responsible for 'white spot', a disease causing significant economic losses to the global aquaculture industry. Options for disease control are extremely limited, and Ich's obligate parasitic lifestyle makes experimental studies challenging. Unlike most well-studied protozoan parasites, Ich belongs to a phylum composed primarily of free-living members. Indeed, it is closely related to the model orga...

  12. Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control

    OpenAIRE

    Coyne, Robert S; Hannick, Linda; Shanmugam, Dhanasekaran; Jessica B Hostetler; Brami, Daniel; Joardar, Vinita S; Johnson, Justin; Radune, Diana; Singh, Irtisha; Jonathan H Badger; Kumar, Ujjwal; Saier, Milton; Wang, Yufeng; Cai, Hong; Gu, Jianying

    2011-01-01

    Abstract Background Ichthyophthirius multifiliis, commonly known as Ich, is a highly pathogenic ciliate responsible for 'white spot', a disease causing significant economic losses to the global aquaculture industry. Options for disease control are extremely limited, and Ich's obligate parasitic lifestyle makes experimental studies challenging. Unlike most well-studied protozoan parasites, Ich belongs to a phylum composed primarily of free-living members. Indeed, it is closely relat...

  13. Distribution of planktonic ciliates in autumn and winter in the shelf areas of the East China Sea%秋冬季东海陆架区浮游纤毛虫的生态分布特点

    Institute of Scientific and Technical Information of China (English)

    张翠霞; 张武昌; 赵楠; 肖天

    2011-01-01

    于2006年11月19日至12月23日(秋季)和2007年2月22日至3月11日(冬季)在东海陆架区(25°-33°N,12°-127°30'E)的6个断面(E1-E6)调查分析了浮游生活的寡毛目纤毛虫的生态分布特点.结果表明:秋季纤毛虫丰度为0~1 795个/dm,生物量(C)为0~2.36 μg/dm;冬季纤毛虫丰度为0~22 695个/dm,生物量(C)为0~10.87 μg/dm.秋季在外陆架区和中陆架区纤毛虫丰度与生物量高于内陆架区,冬季中陆架区纤毛虫丰度和生物量高于外陆架区和内陆架区.纤毛虫水柱丰度和水柱生物量高值秋季时出现在靠近外陆架北部的E2断面和南部E5断面,冬季出现在北部断面陆架中心位置.秋季和冬季纤毛虫主要分布在水体中上层.丰度上,两个季节都是无壳纤毛虫占优势;生物量上,秋季砂壳纤毛虫对生物量的贡献大于无壳纤毛虫.ESD(Equiva-lent Spherical Diameter)为10~20 μm的小型纤毛虫分别占秋季和冬季纤毛虫丰度的63%和82%.与已有的资料对比发现,东海陆架区浮游纤毛虫的生态分布没有发生明显变化.%Abundance, biomass and size structure of planktonic oligotrich ciliate were investigated in the shelf areas of East China Sea (25°~33°N, 120°~127°30'E) at six transects (E1-E6) during two cruises in autumn (11.19-12.23) 2006 and winter (2.22-3.11) 2007.Ciliate abundance and biomass ranged from 0 to 1795 ind./L and from 0 to 2.36 μg C/L, respectively, in autumn.Ciliate abundance and biomass were in the range of 0 to 22 695 ind./L and 0 to 10.87 μg C/L, respectively, in winter.In autumn, ciliate abundance and biomass in outer and middle shelf was greater than inner shelf water.However, in winter the middle shelf had more ciliates than outer and inner shelf.High water column integrated ciliate abundance distributed in the northern transect E2 and southern transect E5 near the outer shelf in autumn and in center area of northern transects in winter.Vertically, ciliates mainly

  14. Sulphur-cycling bacteria and ciliated protozoans in a Beggiatoaceae mat covering organically enriched sediments beneath a salmon farm in a southern Chilean fjord.

    Science.gov (United States)

    Aranda, Carlos P; Valenzuela, Cristian; Matamala, Yessica; Godoy, Félix A; Aranda, Nicol

    2015-11-15

    The colourless mat covering organically enriched sediments underlying an intensive salmon farm in Estero Pichicolo, southern Chile, was surveyed by combined 454 PyroTag and conventional Sanger sequencing of 16S/18S ribosomal RNA genes for Bacteria and Eukarya. The mat was dominated by the sulphide-oxidizing bacteria (SOB) Candidatus Isobeggiatoa, Candidatus Parabeggiatoa and Arcobacter. By order of their abundances, sulphate-reducing bacteria (SRB) were represented by diverse deltaproteobacterial Desulfobacteraceae, but also within Desulfobulbaceae, Desulfuromonadaceae and Desulfovibrionaceae. The eukaryotic PyroTags were dominated by polychaetes, copepods and nematodes, however, ciliated protozoans were highly abundant in microscopy observations, and were represented by the genera Condylostoma, Loxophyllum and Peritromus. Finally, the abundant Sulfurimonas/Sulfurovum also suggest the occurrence of zero-valence sulphur oxidation, probably derived from Beggiatoaceae as a result of bacteriovorus infaunal activity or generated as free S(0) by the Arcobacter bacteria. The survey suggests an intense and complex sulphur cycle within the surface of salmon-farm impacted sediments.

  15. Molecular phylogeny and species separation of five morphologically similar Holosticha-complex ciliates (Protozoa, Ciliophora) using ARDRA riboprinting and multigene sequence data

    Science.gov (United States)

    Gao, Feng; Yi, Zhenzhen; Gong, Jun; Al-Rasheid Khaled, A. S.; Song, Weibo

    2010-05-01

    To separate and redefine the ambiguous Holosticha-complex, a confusing group of hypotrichous ciliates, six strains belonging to five morphospecies of three genera, Holosticha heterofoissneri, Anteholosticha sp. pop1, Anteholosticha sp. pop2, A. manca, A. gracilis and Nothoholosticha fasciola, were analyzed using 12 restriction enzymes on the basis of amplified ribosomal DNA restriction analysis. Nine of the 12 enzymes could digest the DNA products, four ( Hinf I, Hind III, Msp I, Taq I) yielded species-specific restriction patterns, and Hind III and Taq I produced different patterns for two Anteholosticha sp. populations. Distinctly different restriction digestion haplotypes and similarity indices can be used to separate the species. The secondary structures of the five species were predicted based on the ITS2 transcripts and there were several minor differences among species, while two Anteholosticha sp. populations were identical. In addition, phylogenies based on the SSrRNA gene sequences were reconstructed using multiple algorithms, which grouped them generally into four clades, and exhibited that the genus Anteholosticha should be a convergent assemblage. The fact that Holosticha species clustered with the oligotrichs and choreotrichs, though with very low support values, indicated that the topology may be very divergent and unreliable when the number of sequence data used in the analyses is too low.

  16. Morphology and SSU rDNA sequence analysis of two hypotrichous ciliates (Protozoa, Ciliophora, Hypotrichia) including the new species Metaurostylopsis parastruederkypkeae n. sp.

    Science.gov (United States)

    Lu, Borong; Wang, Chundi; Huang, Jie; Shi, Yuhong; Chen, Xiangrui

    2016-05-01

    The morphology and phylogeny of two hypotrichous ciliates, Metaurostylopsis parastruederkypkeae n. sp. and Neourostylopsis flavicana (Wang et al., 2011) Chen et al., 2013 were investigated based on morphology, infraciliature and the small subunit (SSU) ribosomal RNA gene (rRNA) sequence. The new species, M. parastruederkypkeae n. sp. was identified according to its characteristics: body shape ellipsoidal, size about (165-200) × (45-60) μm in vivo, cell color reddish; two types of cortical granules including wheat grain-like and yellow-greenish larger ones along the marginal cirri rows and dorsal kineties and dot-like and reddish smaller ones, grouped around marginal cirri on ventral side and arranged in short lines on dorsal side; 26-41 adoral membranelles; three frontal and one parabuccal, five to seven frontoterminal, one buccal, and three to six transverse cirri; seven to thirteen midventral pairs; five to nine unpaired ventral cirri, five to seven left and three to five right marginal rows; and three complete dorsal kineties. Phylogenetic analysis based on SSU rDNA sequences showed that both Metaurostylopsis and Neourostylopsis are monophyletic. As the internal relationship between and within both genera are not clear, further studies on the species in these two genera are necessary. The key characteristics of all known twelve Metaurostylopsis-Apourostylopsis-Neourostylopsis species complex were updated.

  17. Description of the rare marine ciliate, Uronychia multicirrus song, 1997 (Ciliophora; Euplotida) based on morphology, morphogenesis and SS rRNA gene sequence.

    Science.gov (United States)

    Shen, Zhuo; Shao, Chen; Gao, Shan; Lin, Xiaofeng; Li, Jiqiu; Hu, Xiaozhong; Song, Weibo

    2009-01-01

    A population of the marine euplotid ciliate, Uronychia multicirrus Song 1997, found in the littoral zone of the Daya Bay, Guangdong, South China, was investigated using live observation and protargol impregnation method. This species is diagnosed by possessing a long row of ventral cirri, which has never been seen in all other known congeners. Divisional process, described based on protargol-impregnated specimens, is typical of the genus regarding its general pattern: (1) the oral primordia in both proter and opisthe develop de novo in two subcortical pouches, while the UM-anlage forms de novo (i.e. does not develop from the oral primordium); (2) five frontoventral-transverse (FVT)-cirral anlagen develop in a primary-mode on the cell surface, and almost all the cirri are derived from the FVT-anlagen, except the first frontal cirri, which are formed de novo in both dividers; (3) the species characteristic ventral row derives from the right-most FVT-anlage; (4) the parental structures do not take part in the construction of the marginal anlagen, and (5) the caudal cirri originate in the right-most two dorsal kineties in a multi-segmentation mode. The small subunit rRNA gene of U. multicirrus (GenBank accession number: EU267929) is 1,773 bp and differs by 0.9-1.41% from its closely related congeners.

  18. 纤毛类原生动物中宿主-共生体系统的研究%Studies on the Host-Symbiont System in Ciliates

    Institute of Scientific and Technical Information of China (English)

    顾福康; 孙军; 何远; 田沁

    2001-01-01

    目前已经在100多种纤毛虫中观察到细菌、藻类和其他微生物等共生体。对纤毛虫中宿主-共生体系统的研究表明,双小核草履虫中卡巴粒的遗传为细胞质遗传理论提供了例证;含细菌共生体的许多厌氧纤毛虫无线粒体,共生体对宿主代谢有重要作用;尾草履虫-钝状全孢螺菌共生作用中,共生菌感染形式的39kDa、15kDa周质蛋白可分别与IF-3-1、IF-3-2两种单抗反应,其共生体早期感染过程中两种抗原的量发生显著变化,并且共生体生殖 形式选择性地合成63kDa蛋白质,该蛋白质可能是与共生作用有联系的关键分子;绿草履虫-小球藻共生系统中,共生藻中存在葡糖胺硬性壁是其与草履虫发生共生关系的基本条件,其中,共生藻参与宿主代谢,与宿主形成相互受益的专一性关系,并且藻类共生体的作用可能影响了宿主草履虫基因组有关结构,改变了其基因表达。作者推测,探索共生体对宿主基因结构及其表达产物的影响可能是对纤毛虫中共生作用研究的主要趋势,这对于深入了 解真核细胞中宿主-共生体双方的相互作用、物质交流在分子水平上的调控机理、细胞结构与功能的关系等细胞生命活动规律是有意义的。%To date, bacterial,algal and other microbial symbionts have been found in more than 100 species of ciliates. The study of the host-symbiont system in ciliates shows that: ( 1 ) The inheritance of kappa particles in the cytoplasm of Paramecium aurelia is a classic example of the cytoplasmic inheritance theory. (2) Bacterial symbionts in some anerobic ciliates that lack mitochondria play the major role in the host's metabolism. (3) In the P. Caudatum-Holospora obtusa system, 39- and 15-kDa periplasmic pro teins of the infectious H. Obtusa reacted with IF-3-1 and IF-3-2 monoclonal antibodies respectively. The amounts of both antigens were reduced during

  19. Zygotic Expression of the Double-Stranded RNA Binding Motif Protein Drb2p Is Required for DNA Elimination in the Ciliate Tetrahymena thermophila ▿

    Science.gov (United States)

    Motl, Jason A.; Chalker, Douglas L.

    2011-01-01

    Double-stranded RNA binding motif (DSRM)-containing proteins play many roles in the regulation of gene transcription and translation, including some with tandem DSRMs that act in small RNA biogenesis. We report the characterization of the genes for double-stranded RNA binding proteins 1 and 2 (DRB1 and DRB2), two genes encoding nuclear proteins with tandem DSRMs in the ciliate Tetrahymena thermophila. Both proteins are expressed throughout growth and development but exhibit distinct peaks of expression, suggesting different biological roles. In support of this, we show that expression of DRB2 is essential for vegetative growth while DRB1 expression is not. During conjugation, Drb1p and Drb2p localize to distinct nuclear foci. Cells lacking all DRB1 copies are able to produce viable progeny, although at a reduced rate relative to wild-type cells. In contrast, cells lacking germ line DRB2 copies, which thus cannot express Drb2p zygotically, fail to produce progeny, arresting late into conjugation. This arrest phenotype is accompanied by a failure to organize the essential DNA rearrangement protein Pdd1p into DNA elimination bodies and execute DNA elimination and chromosome breakage. These results implicate zygotically expressed Drb2p in the maturation of these nuclear structures, which are necessary for reorganization of the somatic genome. PMID:22021239

  20. Morphology, morphogenesis and small subunit rRNA gene sequence of a soil hypotrichous ciliate, Perisincirra paucicirrata (Ciliophora, Kahliellidae), from the shoreline of the Yellow River, North China.

    Science.gov (United States)

    Li, Fengchao; Xing, Yi; Li, Jiamei; Al-Rasheid, Khaled A S; He, Songke; Shao, Chen

    2013-01-01

    The morphology, morphogenesis, and 18S rRNA gene sequence of a soil hypotrichous ciliate Perisincirra paucicirrata, isolated from north China, were investigated. Perisincirra paucicirrata differs from its congeners in: (1) having a body length to width ratio in vivo of 4:1, (2) its adoral zone occupying between 15% and 25% of the total body length, and (3) the presence of two parabuccal cirri, three left (with 10-16 cirri each) and two right marginal rows (with 14-24 cirri each), and three dorsal kineties. Our study offers a first attempt to begin to map the morphogenetic processes of the genus, which are mainly characterised by the following: the formation of four frontal ventral transverse anlagens for each daughter cell, with the proter's anlage I originating from the reorganised anterior part of the parental paroral; the paroral and endoral anlage developed from the reorganised old endoral and do not contribute the first frontal cirrus; the frontoventral transverse anlage I contributing the left frontal cirrus; anlage II generating the middle frontal and the buccal cirri; anlage III developing the right frontal cirrus and the anterior parabuccal cirrus; and anlage IV contributing the posterior parabuccal cirrus. As an additional contribution, we judge that the inner one or the two right rows of P. kahli and P. longicirrata are marginal rows. Phylogenetic analysis based on SSU rDNA sequences suggests that Perisincirra is related to sporadotrichids, but provides no credible evidence for its taxonomic position.

  1. SSU rDNA sequence diversity and seasonally differentiated distribution of nanoplanktonic ciliates in neritic Bohai and Yellow Seas as revealed by T-RFLP.

    Directory of Open Access Journals (Sweden)

    Jun Dong

    Full Text Available Nanociliates have been frequently found to be important players in the marine microbial loop, however, little is known about their diversity and distribution in coastal ecosystems. We investigated the molecular diversity and distribution patterns of nanoplanktonic oligotrich and choreotrich (OC ciliates in surface water of three neritic basins of northern China, the South Yellow Sea (SYS, North Yellow Sea (NYS, and Bohai Sea (BS in June and November 2011. SSU rRNA gene clone libraries generated from three summertime samples (sites B38, B4 and H8 were analyzed and revealed a large novel ribotype diversity, of which many were low-abundant phylotypes belonging to the subclass Oligotrichia, but divergent from described morphospecies. Based on the data of terminal-restriction fragment length polymorphism (T-RFLP analysis of all 35 samples, we found that the T-RF richness was generally higher in the SYS than in the BS, and negatively correlated with the molar ratio of P to Si. Overall, multidimensional scaling and permutational multivariate analysis of variance of the community turnover demonstrated a distinct seasonal pattern but no basin-to-basin differentiation across all samples. Nevertheless, significant community differences among basins were recognized in the winter dataset. Mantel tests showed that the environmental factors, P:Si ratio, water temperature and concentration of dissolved oxygen (DO, determined the community across all samples. However, both biogeographic distance and environment shaped the community in winter, with DO being the most important physicochemical factor. Our results indicate that the stoichiometric ratio of P:Si is a key factor, through which the phytoplankton community may be shaped, resulting in a cascade effect on the diversity and community composition of OC nanociliates in the N-rich, Si-limited coastal surface waters, and that the Yellow Sea Warm Current drives the nanociliate community, and possibly the

  2. La estria supranuclear de las células ciliadas en la rinitis alérgica Supranuclear stria of ciliated cells in allergic rhinitis

    Directory of Open Access Journals (Sweden)

    Ana Zerdiew

    2007-08-01

    Full Text Available Se estudiaron 80 pacientes adultos alérgicos, que cursaron con los siguientes cuadros clínicos: 16 casos de rinitis intermitente y 64 de rinitis persistente. Se realizó el recuento porcentual de la estría supranuclear de las células ciliadas, respecto de los leucocitos presentes en los extendidos obtenidos por toma endonasal. Con los datos obtenidos se clasificaron los extendidos en 4 grupos; Grupo A (N=23: predominio leucocitario eosinófilo con eosinofilia nasal >10%, Grupo B (N=15: abundantes leucocitos neutrófilos y eosinofilia nasal >10%, Grupo C (N=29: con escasos leucocitos, Grupo D (N=13: con abundantes leucocitos de predominio neutrófilo sin eosinofilia. Se observó que el incremento porcentual de estría supranuclear se correlacionó con eosinofilia nasal >10% y con las muestras que presentaron escasos leucocitos. Sin embargo se evidenció una marcada disminución del porcentaje de estría supranuclear en la leucocitosis neutrófila de etiología bacteriana.Nasal secretions were studied in 80 allergic adults patients: 16 with intermittent rhinitis and 64 with persistent rhinitis. The percentage of supranuclear stria of ciliated cells with regard to leucocytes was studied by nasal scraping. Four groups of patients were classified according to nasal leucocytic predominance: patients with eosinophilic predominance with eosinophils > 10% in Group A (N=23, patients with abundant neutrophils and eosinophils >10% in Group B (N=15, patients with scant leucocytes in Group C (N=29, patients with neutrophilic predominance without eosinophils in Group D (N=13. An increase of supranuclear stria percentage was correlated to eosinophils > 10% and also correlated to scant leucocytes. Nevertheless, a significant decrease of supranuclear stria percentage was observed in neutrophilic leukocytosis of bacterial etiology.

  3. Genome-wide identification and evolution of ATP-binding cassette transporters in the ciliate Tetrahymena thermophila: A case of functional divergence in a multigene family

    Directory of Open Access Journals (Sweden)

    Yuan Dongxia

    2010-10-01

    Full Text Available Abstract Background In eukaryotes, ABC transporters that utilize the energy of ATP hydrolysis to expel cellular substrates into the environment are responsible for most of the efflux from cells. Many members of the superfamily of ABC transporters have been linked with resistance to multiple drugs or toxins. Owing to their medical and toxicological importance, members of the ABC superfamily have been studied in several model organisms and warrant examination in newly sequenced genomes. Results A total of 165 ABC transporter genes, constituting a highly expanded superfamily relative to its size in other eukaryotes, were identified in the macronuclear genome of the ciliate Tetrahymena thermophila. Based on ortholog comparisons, phylogenetic topologies and intron characterizations, each highly expanded ABC transporter family of T. thermophila was classified into several distinct groups, and hypotheses about their evolutionary relationships are presented. A comprehensive microarray analysis revealed divergent expression patterns among the members of the ABC transporter superfamily during different states of physiology and development. Many of the relatively recently formed duplicate pairs within individual ABC transporter families exhibit significantly different expression patterns. Further analysis showed that multiple mechanisms have led to functional divergence that is responsible for the preservation of duplicated genes. Conclusion Gene duplications have resulted in an extensive expansion of the superfamily of ABC transporters in the Tetrahymena genome, making it the largest example of its kind reported in any organism to date. Multiple independent duplications and subsequent divergence contributed to the formation of different families of ABC transporter genes. Many of the members within a gene family exhibit different expression patterns. The combination of gene duplication followed by both sequence divergence and acquisition of new patterns of

  4. 低盐度围隔调控环境浮游纤毛虫群落结构与动态%Community structure and its dynamics of planktonic ciliate in controlled low salinity enclosure environment

    Institute of Scientific and Technical Information of China (English)

    黄斌; 查广才

    2011-01-01

    In order to understand the effects of fertilization and water quality control on the planktons in farming waters, an investigation from June to October 2008 was made on the community structure and population dynamics of planktonic ciliate in controlled low salinity enclosure environment. Through living body observation and stained specimen observation, a total of 48 planktonic ciliate species were detected, belonging to 3 classes, 11 orders, and 37 genera, of which,8 species were of Oligotrichida, 7 species were peritrichida, and 6 species were of hypotrichida and scuticociliatida. The dominant species mostly enjoyed living in eutrophic water or were pollution-resistant species, e. g. , Tintinnopsis cylindrata , Stranbidium globosaneum , Pleuronema marinum, Mesodinium pulex, Coleps hirtus, and Cyclidium citrullus, etc. Different fertilization treatments had significant effects on the community composition and population dynamics of planktonic ciliate. In investigation period, the highest species number of planktonic ciliate in the enclosure environment was averagely 9, and the lowest one was averagely 4. In the test 10 control enclosures, the highest density of planktonic ciliate was averagely 112. 30 cells · ml-1 , and the lowest one was averagely 19. 50 cells · ml-1. The average species number and density of planktonic ciliate were 6-7 and 52. 56 cells · ml-1, respectively. In the enclosures applied with organic fertilizer,the ciliates addicted to entrophic water were the dominant species. There was a close relationship between the population dynamics of planktonic ciliates and planktonic algae. Their densities were lower in early and late periods and higher in intermediate period, and the diversity of planktonic ciliates of early and late periods was lower intermediate period while that of planktonic algae was.%为了解施肥与水质调控对养殖水体中原生动物的影响,2008年6-10月,对低盐度围隔调控环境中浮游纤毛虫种群结构及

  5. Protocruzia,a highly ambiguous ciliate(Protozoa;Ciliophora):Very likely an ancestral form for Heterotrichea,Colpodea or Spirotrichea? With reevaluation of its evolutionary position based on multigene analyses

    Institute of Scientific and Technical Information of China (English)

    Thorsten; STOECK; Shin; Mann; Kyoon; Al-Rasheid; Khaled; A.; S.; Al-Khedhairy; Abdulaziz; A.

    2010-01-01

    The ciliate genus Protocruzia belongs to one of the most ambiguous taxa considering its systematic position,possibly as a member of the classes Heterotrichea,Spirotrichea or Karyorelictea,which is tentatively placed into Spirotrichea in Lynn’s 2008 system.To test these hypotheses,multigene trees(Bayesian inference,evolutionary distance,maximum parsimony,and maximum likelihood) were constructed using the small subunit rRNA(SSU rRNA) gene,internal transcribed spacer 2(ITS2) and a protein coding gene(histone H4).All analyses agree that:(1) four morphotypes of Protocruzia from different geographical origins group together and form a monophyletic clade,which cannot be assigned to any of the eleven described ciliate classes;(2) it is invariably positioned on an isolated branch separated from the class Spirotrichea suggesting that this clade should be clearly removed from Spirotrichea;(3) this leads us to hypothesize that this taxon may indeed represent a lineage on a class rank.Based on the fact that it is,both morphologically and in molecular features,closely related to the heterotrichs,Colpodea and Oligohymenophorea,Protocruziida might be an ancestral form for the subphylum Intramacronucleata in the evolutionary line from the class Heterotrichea(subphylum Postciliodesmatophora) to higher taxa.

  6. ABUNDANCE AND BIOMASS OF COPEPOD NAUPLII AND CILIATES IN JIAOZHOU BAY%胶州湾桡足类幼虫和浮游生纤毛虫的丰度与生物量

    Institute of Scientific and Technical Information of China (English)

    张武昌; 王荣

    2001-01-01

    This paper presents data of ciliates and copepod nauplii abundance and biomass from eight cruises (September, December, 1997; February, April, August, November, 1998; February, May, 1999) in Jiaozhou Bay. Water samples were taken by 2L Niskin Bottles at ten stations during every cruise. One liter water was preserved in plastic bottle with Lugol's (1%). The sample scheme of water layer was surface, middle and bottom according to water depth. The samples were examined with the method of Utermohl (1958) one month after sampling. Carbon:volumn ratio was 0.05 pgC/μm3 for copepod nauplii (Mullin, 1969), 0.19pgC/μm3 for ciliates (Putt et al, 1989). Body volume of tintinnids was assumed to be 50% of that of the lorica (Beers et al, 1969).   Copepod nauplii dominated in September 1997. The aloricate oligotrichous ciliates were dominant through December 1997 to February 1999. Tintinnids dominated in May 1999. The maximum abundance of copepod nauplii, aloricate ciliates and tintinnids were 850 (August, 1998), 21300 (August, 1998) and 1720 ind/L (May, 1999) respectively. The total abundance of the above three in the surface layer was 10—22350 ind/L, with larger abundance in the inner part of the bay. There was no obvious trend in the vertical distribution. The total biomass of copepod nauplii, aloricate ciliates and tintinnids in the surface layer was in the range of 0.10—380.27μgC/L, water column biomass 0.20—1426.02mgC/m2.%1997年9月、12月,1998年2月、4月、8月、11月以及1999年2月和5月在胶州湾采集桡足类幼虫和浮游生纤毛虫的样品。样品用Lugol's试剂固定(最后浓度1%),用显微镜计数桡足类幼虫和浮游生纤毛虫的丰度,并计算总生物量(表层生物量和水体生物量)。桡足类幼虫、无壳纤毛虫和砂壳纤毛虫的最大丰度分别为850ind/L(1998年8月)、21300ind/L(1998年8月)和1720ind/L(1999年5月)。表层的总丰度为10—22630ind/L,水平分布湾内比湾外多。表层纤

  7. Predação e canibalismo entre protozoários ciliados (Ciliophora: Entodiniomorphida: Ophryoscolecidae no rúmen de ovinos (Ovis aries Predation and cannibalism among ciliate protozoans (Ciliophora: Entodiniomorphida: Ophryoscolecidae in the rumen of sheep (Ovis aries

    Directory of Open Access Journals (Sweden)

    Isabel Martinele

    2008-09-01

    Full Text Available O objetivo deste trabalho foi registrar ocorrências de predação e canibalismo em protozoários ciliados no rúmen de ovinos. Foram analisadas amostras de conteúdo ruminal de cinco ovinos mestiços Santa Inês, fistulados no rúmen, mantidos em pastagem natural de caatinga, no município de Sertânia, Pernambuco. Foram obtidas seis amostras de conteúdo ruminal de cada ovino, totalizando 30 amostras, as quais foram fixadas em formalina 18,5% (v/v. De cada amostra foi retirada uma alíquota de 1 ml de conteúdo ruminal ao qual se adicionaram três gotas de solução de lugol para a coloração e identificação dos protozoários ciliados. Estas alíquotas foram analisadas utilizando-se lâminas e lamínulas, em campos determinados randomicamente. Constatou-se a ocorrência de interações do tipo predador-presa entre ciliados de Ophryoscolecidae Stein, 1859, onde Elytroplastron bubali (Dogiel, 1928 apresentou comportamento predatório sobre Enoploplastron triloricatum (Dogiel, 1925 e sobre outras espécies de Epidinium Crawley, 1923 e de Entodinium Stein, 1859. Foram ainda observados casos de canibalismo entre espécimes de E. bubali, o que consiste no primeiro registro deste tipo de interação nesta espécie. Registra-se, ainda, pela primeira vez a ocorrência de E. bubali no rúmen de ovinos no Brasil.The objective of the present study was to record the occurrence of predation and cannibalism among ciliate protozoans in the rumen of sheep. The analyzed samples consisted of ruminal contents of five fistulated Santa Inez crossbred sheep, maintained in a natural caatinga (scrubland pasture in the municipality of Sertânia, Pernambuco. Six samples of ruminal content were obtained from each sheep (total of 30 samples and fixed in formalin at 18.5% (v/v. One 1 ml aliquot was obtained from each sample of ruminal content and received tree drops of a lugol solution for staining and identification of protozoa ciliates. These aliquots were analyzed in

  8. A novel trypanoplasm-like flagellate Jarrellia atramenti n. g., n. sp. (Kinetoplastida: Bodonidae) and ciliates from the blowhole of a stranded pygmy sperm whale Kogia breviceps (Physeteridae): morphology, life cycle and potential pathogenicity.

    Science.gov (United States)

    Poynton, S L; Whitaker, B R; Heinrich, A B

    2001-04-10

    The successful 6 mo rehabilitation of a stranded juvenile pygmy sperm whale Kogia breviceps afforded the opportunity to study the poorly known protozoan fauna of the upper respiratory tract of cetaceans. Mucus samples were collected by holding either a petri dish or glass slides over the blowhole for 3 to 5 exhalations; preparations were examined as wet mounts, and then stained with Wrights-Giemsa or Gram stain. Blood smears were stained with Wrights-Giemsa. Unidentified spindle-shaped and unidentified broad ciliates, reported from the blowhole of the pygmy sperm whale for the first time, were seen only initially, while yeast-like organisms and bacteria were seen intermittently. Epithelial cells and white blood cells were often present in the blowhole mucus, but red blood cells were never seen. A novel trypanoplasm-like bodonid kinetoplastid biflagellate (Order Kinetoplastida) was commonly encountered in the blowhole mucus, but never in the blood. Both mature flagellates and those undergoing longitudinal binary fission were present. The elongate flagellate had a long whiplash anterior flagellum; the recurrent flagellum was attached along at least two-thirds of the body length, forming a prominent undulating membrane, and the trailing portion was short. The kinetoplast was irregularly fragmented. The flagellates were either free-swimming, or attached to host material via the free portion of the posterior flagellum. The prominent undulating membrane was characteristic of Trypanoplasma, while the fragmented kinetoplast was characteristic of some species of Cryptobia. For the novel bodonid kinetoplastid, with its unique combination of morphological features (prominent undulating membrane and fragmented kinetoplast), we propose the creation of a new genus Jarrellia. We believe this to be the first published description of a flagellate from a marine mammal, and among the first reports of a trypanoplasm-like flagellate from a warm-blooded host. We expect that a diversity

  9. CX3CR1 Is Expressed in Differentiated Human Ciliated Airway Cells and Co-Localizes with Respiratory Syncytial Virus on Cilia in a G Protein-Dependent Manner.

    Directory of Open Access Journals (Sweden)

    Kwang-Il Jeong

    Full Text Available Respiratory syncytial virus (RSV is the principal cause of bronchiolitis in infants and a significant healthcare problem. The RSV Glycoprotein (G mediates attachment of the virus to the cell membrane, which facilitates interaction of the RSV Fusion (F protein with nucleolin, thereby triggering fusion of the viral and cellular membranes. However, a host protein ligand for G has not yet been identified. Here we show that CX3CR1 is expressed in the motile cilia of differentiated human airway epithelial (HAE cells, and that CX3CR1 co-localizes with RSV particles. Upon infection, the distribution of CX3CR1 in these cells is significantly altered. Complete or partial deletion of RSV G results in viruses binding at least 72-fold less efficiently to cells, and reduces virus replication. Moreover, an antibody targeting an epitope near the G protein's CX3CR1-binding motif significantly inhibits binding of the virus to airway cells. Given previously published evidence of the interaction of G with CX3CR1 in human lymphocytes, these findings suggest a role for G in the interaction of RSV with ciliated lung cells. This interpretation is consistent with past studies showing a protective benefit in immunizing against G in animal models of RSV infection, and would support targeting the CX3CR1-G protein interaction for prophylaxis or therapy. CX3CR1 expression in lung epithelial cells may also have implications for other respiratory diseases such as asthma.

  10. Potential distribution of sycamore lace bug, Corythucha ciliate in China (Hemiptera : Tingidae)%悬铃木方翅网蝽在我国的潜在分布分析

    Institute of Scientific and Technical Information of China (English)

    朱耿平; 王晓静; 刘国卿; 卜文俊

    2012-01-01

    运用生态位模型MaxEnt和GARP对悬铃木方翅网蝽Corythucha ciliate (Say)在我国的潜在分布进行了模拟,并结合其寄主植物悬铃木在我国的分布进行了分析.实验采用悬铃木方翅网蝽在我国的分布数据,结合6种气候变量和海拔数据构建模型,并将MaxEnt和GARP的输出结果进行合意.研究显示MaxEnt和GARP的模拟结果基本一致,均能较好的模拟悬铃木方翅网蝽在我国的分布,二者均显示山东西南部和中部、四川中部和东部、重庆、陕西中部、河南中部和东部、安徽、江苏、上海、贵州、湖南、江西、浙江、福建中部和北部、云南中部等地区为悬铃木方翅网蝽的适宜分布区,此外,河北中部和南部、山东东部,广东和广西的北部亦具潜在分布的可能性.与MaxEnt输出结果相比,GARP相对较为保守.MaxEnt输出结果显示年平均气温和极端低温对悬铃木方翅网蝽地理分布的限制作用最大.考虑到该虫对高低温度的耐受性,我国二球悬铃木栽培的南界(南宁和广州)和北界(大连、北京、石家庄、太原)需要重视和监控起来.%Potential distribution of Corythucha ciliate (Say) in China were predicted using two ecological niche modelling algorithms (i.e. , MaxEnt and GARP). The models were calibrated using domestic records and 6 bioclimatic variables plus elevation. These potential distributions were then evaluated with respect to the distribution of pest host plant ( i. e. , Platanus spp. ). Significant variables associating with the bug' s occurrence were identified. Both models performed good discriminability compared to random prediction. Result of GARP was a little conservative compared to MaxEnt. High suitable areas identified by the consensus of two models including; southwestern and central Shandong, eastern and central Sichuan, Chongqing, central Shaanxi, eastern and central Henan, Anhui, Jiangsu, Shanghai, Guizhou, Hunan, Jiangxi, Zhejiang

  11. Separation and electrophysiology of ciliated olfactory receptor neu-rons in Bostrychus sinensis%中华乌塘鳢纤毛嗅神经元的分离及其电生理

    Institute of Scientific and Technical Information of China (English)

    赖晓健; 洪万树; 杨薇

    2013-01-01

    The ciliated olfactory receptor neurons (cORNs) in the olfactory sac were dissociated from Bostrichthys sinensis by enzymatic and mechanical methods. The whole-cell patch-clamp technique was used to determine the resting potential, action potential and voltage-gated ion channel current. The results showed that the B. sinensis cORN was a bipolar neuron, containing cell body, axon and dendrites with olfactory knobs and cilia. The resting and action potential peaks of ciliated olfactory receptor neurons were (–57 ± 6.37) mV and (38.30 ± 0.95) mV, respec-tively. In response to depolarizing voltage steps pulse stimulation from –60 ~ +80 mV, the transient inward current was activated between –60 mV and –40 mV, and reached a peak averaging (–69.08 ± 44.15) pA at −20 to 0 mV; the outward current reached a peak averaging (267.55 ± 73.67) pA at +40 mV. The present study provides a base theory for research in the electrophysiological mechanisms of sex pheromones with their receptors and the application of sex pheromones.%  应用酶消化和机械吹打相结合的方法,快速分离出中华乌塘鳢(Bostrychys sinensis)嗅囊中纤毛嗅觉感受神经元.再应用全细胞膜片钳技术记录中华乌塘鳢纤毛嗅觉感受神经元的静息电位、动作电位及电压门控离子通道电流等电生理学特征.结果表明,中华乌塘鳢纤毛嗅觉感受神经元具有典型的双级神经元结构特征,包括细胞体,轴突,树突以及树突顶端的嗅结和纤毛.嗅觉感受神经元静息电位为(−57±6.37) mV,动作电位峰值为(38.30±0.95) mV.在−60~+80 mV 的阶梯去极化脉冲刺激中,内向电流在−60~−40 mV 激活,−20~0 mV 达到最大值,内向电流峰值为(−69.08±44.15) pA.外向电流在+40 mV 时达最大值,峰值为(267.55±73.67) pA.本研究结果为纤毛嗅觉感受神经元上性信息素受体感受性信息素的电生理机制以及性信息素的应用提供了方法和理论基础.

  12. 夏季蓝藻水华期间太湖河口区和敞水区纤毛虫群落组成及水平分布%COMMUNITY COMPOSITIONS AND HORIZONTAL DISTRIBUTION OF CILIATES IN LAKE TAIHU DURING THE CYANOBACTERIAL BLOOM IN SUMMER

    Institute of Scientific and Technical Information of China (English)

    李静; 卢文轩; 张雷燕; 陈非洲

    2014-01-01

    In the present study, ciliate samples were collected from 10 sites in the estuary zones and 14 sites in the pe-lagic zones in the northern area of Lake Taihu in July 2009. The ciliate species and their horizontal distribution were analyzed with quantitative protargol stain (QPS) method. We also explored the relationship between the ciliate commu-nity compositions and the environmental variables. We observed 105 species that represented 60 genera, 15 orders and 3 classes. The numbers of the species in different order were counted and compared. Orders Haptorida (21 species) and Oligotrichida (20 species) ranked the first and second, followed by orders Prostomatida (12 species), Peritrichida (11 species), and Hypotrichida (11 species). These five orders were predominant in the samples, while less species belonged to the other ten orders -- Karyorelictida, Pleurostomatida, Colpodida, Nassulida, Cyrophorida, Suctoria, Hy-menostomatida, Synhymeniida, Scuticociliatida, and Heterotrichida. Halteria bifurcate Tamar, H. grandinella Dujardin, Rimostrombidium brachykinetum Krainer, Tintinnopsis cylindrata Kofoid & Campbell and Cyclidium glaucoma Müller were the dominant species in both estuary (3.1%-12.3% in abundance) and pelagic (4.5%-18.1%) zones, followed by Urotricha farcta Claparède & Lachmann, Codonella cratera Leidy, R. humile Penard, Strombidium mirabile Penard, Tintinnidium pusillum Entz, Vorticella aquadulcis complex and V. campanula Ehrenberg. The abundance of ciliate was higher in the estuary zones than that in the pelagic zones, which fell in the range of 1600 to 80900 cells/L (average 31407 cells/L) and 1225 cells/L to 36000 cells/L (average 18618 cells/L), respectively. The biomass of ciliate showed the same pattern which was 1322.6μg/L and 543.6μg/L on average in the estuary and pelagic zones, respectively. Nei-ther the abundance nor the biomass of ciliates showed significant differences (P>0.05). Among the functional feeding groups, bactivorous and

  13. Using the Ciliate Protozoan Vorticella in Teaching.

    Science.gov (United States)

    Jones, Alick R.

    1980-01-01

    Describes methods for collection, culture, observation, and making permanent stained preparations of the protozoan vorticella. Suggestions are made for experiments to investigate growth, reproduction, settlement, ecology, feeding, and osmoregulation. (CS)

  14. Sex determination: ciliates' self-censorship.

    Science.gov (United States)

    Bloomfield, Gareth

    2014-07-01

    Differentiation involves the expression of certain latent cellular characteristics and the repression of others. A new study has revealed how Paramecium uses short RNAs to delete information from the somatic genome of one of its two sexes. PMID:25004369

  15. Sex determination: ciliates' self-censorship.

    Science.gov (United States)

    Bloomfield, Gareth

    2014-07-01

    Differentiation involves the expression of certain latent cellular characteristics and the repression of others. A new study has revealed how Paramecium uses short RNAs to delete information from the somatic genome of one of its two sexes.

  16. Population growth performance and productivity of ciliated protozoa community under two different industrialized grouper larval rearing systems%石斑鱼工厂化育苗水体浮游原生动物种群增长与生产量

    Institute of Scientific and Technical Information of China (English)

    王珺; 陈国华; 林彬; 黄宗文; 王永波; 郭仁湘; 杨薇

    2011-01-01

    An in situ experiment was conducted to study the population growth performance and productivity of protozoa community under two different industrialized grouper larval rearing systems. In the bacteria-added group, 13 new species of protozoa were recorded. and the total population density and the total biomass of protozoa community were 87. 3×103 ind . L-1 and 502. 9 mg · m-3; in the microalgae-added group, there were 9 new species derived, and the total population density and the total biomass of protozoa community were 60. 8 × 103 ind · L-1 and 70. 3 mg · m-3 , respectively. For these two groups, Phyllomitus sp. , Strobilidium gyrans , and Oxytricha sp. were the dominant species. The species with relatively high population growth rate in the bacteria-added group were Strombidinopsis sp. ( 0. 0578 ) , Halteria sp. ( 0. 0493 ) , Cyclidium litomesum (0. 0405 ) , Actinophrys sp. (0. 0383 ) , and Mesodimium sp. (0. 0373 ) , and those in the microalgae-added group were Lacrymaria sp. (0. 0153 ) , Strobilidium gyrans (0. 0144) , Strombidium sp. (0. 0117) and Phyllomitus sp. (0. 0100). The total protozoa community productivity varied with rearing-system, being 10. 232 mg · m-3 · h-1 in bacteria-added group and 1. 22 mg · m-3 · h-1 in microalgae-added group. In bacteria-added group, Euplotes eurystoma , Strobilidium gyrans, Amoeba sp. , and Oxytricha sp. had higher productivity than other species; and in microalgae-added group, the species with relatively higher productivity were Actinophrys sp. , Strobilidium gyrans , Phyllomitus sp. , and Mesodimium sp. Overall, the ponds with bacteria added had more abundant diversity, higher biomass, and population growth rate of protozoa community than the ponds with microalgae added, and hence, the water culturing regime with bacteria added could attain more live preys during the mouth-opening period of grouper fry. In the cultured water, some species had high population growth rate, but their biomass was not large. The

  17. 甘肃徽县水阳江铅锌污染段纤毛虫群落特征及对水质的评价%Community Characteristics of Ciliates and Water Quality Assessment in the Pb-Zn-Contaminated Section of the Shuiyangjiang River in Huixian County,Gansu Province

    Institute of Scientific and Technical Information of China (English)

    马正学; 贺鹏辉; 杨镇; 宁应之

    2009-01-01

    2006年10月至2008年5月,在甘肃徽县水阳江铅锌污染段选择4个样点,分别在3个水期采集水样,研究了纤毛虫物种多样性及群落结构.共鉴定到纤毛虫52种,隶属于3纲12目29科33属.利用纤毛虫群落特征指标对水阳江铅锌污染段的水质进行了初步评价.综合评价结果显示,4个样点受污染程度为县城>厂区>牟坝>对照,污染级别为中度至重度.初步筛选出瓜形膜袋虫(Cyclidium citrullus)、尾草履虫(Paramoecium caudatum)、薄漫游虫(Litonotus lamella)作为铅锌污染水体的指示物种.%Species diversity and community structure of ciliates in the Pb-Zn-Contaminated section of the Shuiyangjiang River were studied during the period from October 2006 to May 2008,using water samples collected from 4 sampling sites in that section in 3 different periods.In the water samples,52 species of ciliates,sorted into 3 classes,12 orders,29 family and 33 genus,were identified,based on which water quality of that section of the Shuiyangjiang River was preliminarily evaluated.Results show that pollution of the water varied in degree between the four sampling sites in the section,following a decreasing order of Xiancheng>Changqu>Muba>Duizhao,from severe to moderate.Ciliates of Cyclidium citrullus,Paramecium caudatum,and Litonotus lamella were screened out to be indicators of Pb-Zn-contamination of water bodies.

  18. 广东沿海的砂壳纤毛虫及3种国内新纪录%TINTINNID CILIATES FROM COASTAL WATERS OFF GUANGDONG, WITH NOTES ON THREE NEW RECORDS OF CHINA (PROTOZOA, CILIOPHORA)

    Institute of Scientific and Technical Information of China (English)

    张伟; 姜勇; 李继秋; 马洪钢; 许恒龙

    2012-01-01

    Tintinnid ciliates are an important component of plankton communities and widely distribute in the coastal waters. However, in morphological studies, the tintinnids belonged to the poorly known groups, especially in the water of the South China Sea. In the winter of 2008, the tintinnids sampled from the coastal waters in the South China Sea (Guangdong) were investigated. The water temperature was 17-20℃ and the salinity was about 30‰-31‰. Samples were collected by a horizontal tow net from 1.5 m under the water surface. Part of samples were immediately stored in 4℃ for in vivo observation and the others were fixed in formalin at a final concentration of 5% for future observations of lorica characteristics. The morphological characteristics including lorica features were observed and described by using light microscopical method. In this present study, 16 species were indentified and they belonged to Tintinnopsis, Codonella, Stenosemella and Favella. Three of them were believed to be the first records of China, Codonella apicata Kofoid & Campbell, 1929, Tintinnopsis turbo Meunier, 1919 and Stenosemella expansa Wailes, 1925. In addition, another three species were the first records in the semi-tropical and tropical areas of China, Tintinnopsis tubulosoides Meunier, 1910; Tintinnopsis lohmanni (Jorgensen, 1927) Laackmann, 1906, and Codonella rapa Kofoid & Campbell, 1929. The other 10 species included Tintinnopsis beroidea Stein, 1867, Tintinnopsis acuminata (Daday, 1887) Kofoid & Campbell, 1929, Tintinnopsis tocantinensis Kofoid & Campbell, 1929, Tintinnopsis tubulosoides Meunier, 1910, Tintinnopsis tublosa Levander, 1900, Tintinnopsis clongata Daday, 1887, Tintinnopsis lohmanni (Jorgensen, 1927) Laackmann,, 1906, Stenosemella parvicollis (Marshall, 1934) Hada, 1935, Favella campanula (Schmidt, 1901)J(o)rgensen, 1924, and Codonella rapa Kofoid & Campbell, 1929.%对广东沿海的砂壳纤毛虫进行了初步研究,涉及7属16种,其中3种确定为中

  19. Fontes de lipídeos e monensina na alimentação de novilhos Nelore e sua relação com a população de protozoários ciliados do rúmen Effects of feeding monensin and different sources of fat on the ruminal population of ciliate protozoa in Nellore steers

    Directory of Open Access Journals (Sweden)

    Amaury Camilo Valinote

    2005-08-01

    Full Text Available Quatro novilhos Nelore, fistulados e canulados no rúmen, foram distribuídos em um delineamento quadrado latino 4 x 4, para avaliar o caroço de algodão e o sal de cálcio de ácidos graxos como fontes de gordura assim como o efeito da monensina em dietas com caroço de algodão, sobre a população de protozoários ciliados e o pH do rúmen. Os tratamentos experimentais foram: dieta controle (CTRL, dieta com sal de cálcio de ácidos graxos (SC, dieta com caroço de algodão (CA e dieta com caroço de algodão sem monensina (CASM. Amostras do conteúdo ruminal foram colhidas às 0, 2, 4, 6 e 8 horas após a alimentação. Foi utilizada câmara de contagem de Sedgwick-Rafter com capacidade de 1mL e microscópio ótico comum provido de retículo com área de 0,4362 mm², para identificação dos gêneros de ciliados. Não houve diferença entre os tratamentos para o pH do rúmen. Os tratamentos com caroço de algodão reduziram todos os gêneros de protozoários ciliados, em especial de Entodinium, provavelmente pela gordura liberada. Os protozoários dos gêneros Diplodinium, Epidinium e Eudiplodinum e o número total de protozoários foram os únicos que sofreram influência do tempo de alimentação. Sais de cálcio de ácidos graxos foram suficientemente inertes no ambiente ruminal, não afetando o número de protozoários ciliados no rúmen de bovinos Nelore. A utilização de monensina em dietas contendo caroço de algodão e alto concentrado não influenciou o número de protozoários ciliados no rúmen de bovinos Nelore.Four ruminally and duodenally cannulated Nellore steers were assigned to a 4 x 4 latin square to study the effects of feeding monensin (M and different sources of fat on the ruminal population of ciliate protozoa and ruminal pH. The experimental diets contained (DM basis 19% of sugar cane and were supplemented with M [control (CTRL], M plus calcium salts of fatty acids (CSFA, M plus whole cottonseed (MWCS, or only WCS

  20. Abundância de ciliados planctônicos em reservatórios em cascata do rio Paranapanema, Brasil- DOI: 10.4025/actascibiolsci.v26i4.1532 Abundance of planktonic ciliates in a cascading reservoirs of the Paranapanema River, Brazil - DOI: 10.4025/actascibiolsci.v26i4.1532

    Directory of Open Access Journals (Sweden)

    Maysa Cláudia Zolin Perenha

    2004-04-01

    Full Text Available O presente estudo teve como objetivo investigar os padrões de distribuição espacial e temporal da densidade e biomassa dos ciliados planctônicos em reservatórios em cascata do rio Paranapanema (22o 18’ - 23o 35’ S; 49o 30’ - 52o 50’ W. Pretende-se testar a hipótese de que, ao longo da série de reservatórios, observa-se um decréscimo da abundância desses organismos no sentido montante-jusante. Para tal, foram coletadas amostras em sete reservatórios, no ano de 2001, em dois períodos hidrológicos distintos, à sub-superfície da região lacustre, com o auxílio de uma garrafa de Van Dorn de 5 litros. Alíquotas de um litro foram obtidas e sua fixação realizada com solução fixadora composta de lugol alcalino, formol e tiossulfeto de sódio. Os valores obtidos para a abundância (densidade e biomassa de ciliados nos diferentes reservatórios (0,4 a 16,6 células.mL-1; 0,23 a 20,7 µg.C.L-1, respectivamente foram inferiores aos resultados encontrados em ambientes eutróficos, porém similares àqueles registrados em ambientes oligo-mesotróficos. A análise dos resultados de distribuição da abundância ao longo da série de reservatórios não corroborou a hipótese preconizada de uma diminuição de densidade e biomassa no sentido montante-jusante, em função da expectativa de uma possível oligotrofização rio abaixo. Em relação aos diferentes grupos funcionais de ciliados, foi constatada a dominância dos Oligotrichida, principalmente os de menor porte (The present study aimed to investigate the spatial and temporal distribution patterns of density and biomass of the planktonic ciliates, in a reservoir serie of the Paranapanema River (22o 18’ - 23o 35’ S; 49o 30’ - 52o 50’ W. We intend to test the hypothesis that, along reservoirs serie, there is a decrease of abundance from river towards the dam. Samplings were carried out in seven reservoirs, during 2001, in two distinct hydrological periods, at subsurface

  1. Níveis de proteína degradável para novilhas em crescimento sobre a concentração de protozoários ciliados e outros parâmetros ruminais Levels of degradable protein given to heifers for the ciliate protozoa concentration and other ruminal parameters

    Directory of Open Access Journals (Sweden)

    Joaquim Balcells

    2001-05-01

    Full Text Available Em um ensaio de controle de parâmetros ruminais (pH, ritmo de trânsito (%h, volume ruminal (l, e concentração de protozoários ciliados, foram utilizadas quatro novilhas Holstein, canuladas no rúmen e duodeno, recebendo dietas com 4 níveis de proteína degradável, sem suplementar ou suplementadas com 25, 50 e 75 gramos de proteína degradável por quilo de concentrado em forma de uréia e caseína (98,2 e 93,2% de matéria orgânica e proteína bruta, respectivamente. As rações experimentais foram compostas por 25% de palha de cevada sem tratar e 75% de concentrado formulado em base a diferentes proporções (25/75 e 75/25 de milho/cevada, com 5% de resíduo de trigo e 5% de suplemento vitamínico mineral. Uma contínua infusão de marcador de fluxo de fase líquida (Cr-EDTA foi executada. Os oito tratamentos experimentais (2 dietas x 4 níveis de infusão foram administrados em 8 períodos de balanço em um delineamento cross-over, em esquema fatorial. O nível de infusão de N degradável afetou de forma significativa os valores médios ponderados de pH, que decresceram ao aumentar a suplementação (p 3/mL que de cevada (59,5 x 103/mL; p Entodinium alcançou 87,8% da população total. O gênero Epidinium apresentou menores valores com a dieta de cevada (3,73 vs. 1,89x103/mL, p 3/mL, p 5/mL, p In this experiment four Holstein heifers fitted with rumen and duodenum canulae were utilized to evaluate the rumen parameters as pH, passage rate (%/h, volume (L and ciliated protozoa concentration, when fed diets with four levels of rumen degradable protein. This was achieved supplementing 0, 25, 50 or 75 grams of degradable protein per kg of concentrate as a urea and casein (98.2% OM and 93.2% CP. The diets had 25% of barley straw without treatment and 75% concentrate formulated to contain different proportions (25/75 and 75/25 of corn and barley and also 5% of wheat residue and 5% of mineral and vitamin supplement. A continuous infusion of

  2. Protozoários ciliados do rúmen de bovinos e bubalinos alimentados com dietas suplementadas com monensina ou própolis Ruminal ciliate protozoa of cattle and buffalo fed on diet supplemented with monensin or extracts from propolis

    Directory of Open Access Journals (Sweden)

    Thaís Barros Ríspoli

    2009-01-01

    Full Text Available O objetivo deste trabalho foi avaliar o efeito de dietas suplementadas com monensina ou produtos à base de própolis, nas populações de protozoários ciliados no rúmen de bovinos (Bos taurus e bubalinos (Bubalus bubalis. Quatro bovinos da raça Holandesa e quatro búfalos da raça Murrah adultos, fistulados no rúmen, foram distribuídos em delineamento quadrado latino (4x4. A dieta constituiu-se de 50% de silagem de milho e 50% de concentrado à base de milho em grãos e farelo de soja, com adição de monensina sódica ou aditivo à base de própolis LLOSA2 ou LLOSC1. As amostras do conteúdo ruminal foram coletadas duas horas após a alimentação. O gênero Entodinium foi o mais representativo em todos os tratamentos, para ambas as raças de ruminantes. Em búfalos, foi observado o efeito redutor do tratamento LLOSC1 nas populações do gênero Entodinium, além do efeito redutor dos tratamentos monensina e LLOSA2 sobre os gêneros da subfamília Diplodiniinae. A média de ciliados foi maior em bubalinos (56x10(4 mL-1 do que em bovinos (26x10(4 mL-1. Houve aumento do pH ruminal dos bovinos no tratamento com monensina. O extrato de própolis LLOSC1 reduziu os ciliados do rúmen em bubalinos.The aim of this work was to evaluate the effect of diets supplemented with monensin or with extracts of propolis, on the population of ciliate protozoa in the rumen of cattle (Bos taurus and water buffalo (Bubalus bubalis. Four Holstein cattle and four Murrah buffalo, fistulated in the rumen, were distributed in 4x4 Latin square design. The diet was constituted by 50% corn silage and 50% concentrate based on corn grain and soybean meal, and the supplementation of monensin sodium or propolis extracts LLOSA2 or LLOSC1. Samples of ruminal contents were collected two hours after feeding. The genus Entodinium was the most common in all treatments for both cattle and buffalo. The LLOSC1 treatment reduced the populations of the genus Entodinium in buffalo

  3. Endosymbiosis In Statu Nascendi: Close Phylogenetic RelationshipBetween Obligately Endosymbiotic and Obligately Free-LivingPolynucleobacter Strains (Betaproteobacteria)

    Energy Technology Data Exchange (ETDEWEB)

    Vannini, Claudia; Pockl, Matthias; Petroni, Giulio; Wu, Qinglong; Lang, Elke; Stackebrandt, Erko; Schrallhammer, Martina; Richardson, PaulM.; Hahn, Martin W.

    2006-07-21

    Bacterial strains affiliated to the phylogenetically shallowsubcluster C (PnecC) of the 28 Polynucleobacter cluster, which ischaracterized by a minimal 16S rRNA gene sequence similarity of approx.98.5 percent, have been reported to occur as obligate endosymbionts of 30ciliates (Euplotes spp.), as well as to occur as free-living cells in thepelagic zone of freshwater habitats. We investigated if these two groupsof closely related bacteria represent 32 strains fundamentally differingin lifestyle, or if they simply represent different stages of afacultative endosymbiotic lifestyle. The phylogenetic analysis of 16SrRNA gene and 16S34 23S ITS sequences of five endosymbiont strains fromtwo different Euplotes species and 40 pure culture strains demonstratedhost-species-specific clustering of the endosymbiont 36 sequences withinthe PnecC subcluster. The sequences of the endosymbionts showedcharacteristics indicating an obligate endosymbiotic lifestyle.Cultivation experiments 38 revealed fundamental differences inphysiological adaptations, and determination of the genome sizesindicated a slight size reduction in endosymbiotic strains. We concludethat the 40 two groups of PnecC bacteria represent obligately free-livingand obligately endosymbiotic strains, respectively, and do not representdifferent stages of the same complex lifecycle. 42 These closely relatedstrains occupy completely separated ecological niches. To our bestknowledge, this is the closest phylogenetic relationship between obligateendosymbionts and 44 obligately free-living bacteria everrevealed.

  4. Security resolution minute for natural gas distribution pipeline; Minuta de resolucao de seguranca na distribuicao do gas natural

    Energy Technology Data Exchange (ETDEWEB)

    Teles, Marcus de Barros [ARCE - Agencia Reguladora de Servicos Publicos Delegados do Estado do Ceara, Fortaleza, CE (Brazil)

    2003-07-01

    In the current scenery of natural gas distribution regulation, there is no specific resolution about security. The security is boarded in few concession contracts of some private gas companies, but not as principal theme. The security resolution minute presented in this paper aim break the direct and indirect causes of accidents, eliminating their potential. In this new point of view, the quality of services is the principal cause to guarantee the security of natural gas distribution systems. The methodology used to develop the minute was based on the research of Brazilian and American resolutions of state regulation agencies, concession contracts of private distribution gas companies, American code of federal regulation, ASME code for pressure piping B31.8 - 1999 edition and the NBR 12712 standard. The result of the research was the elaboration of an specific minute resolution of security that can be used as reference in the fiscalization of the natural gas distribution piping companies activities. This minute, can be an important instrument to avoid accidents and incidents, eliminating prejudices to the people, to properties, to environment and to the image of natural gas distribution companies and regulation agencies. (author)

  5. REDESCRIPTIONS OF TWO MARINE CILIATES, DIOPHRYS SCUTUM (DUJARDIN,1841) KAHL, 1932 AND DIOPHRYS APOLIGOTHRIX SONG ET AL., 2009 (PROTOZOA,CILIOPHORA)%盾圆双眉虫与伪寡毛双眉虫的形态学重描述(原生动物,纤毛门)

    Institute of Scientific and Technical Information of China (English)

    许媛; 李继秋; 胡晓钟

    2011-01-01

    研究对采自青岛沿海的两种海洋纤毛虫-盾圆双眉虫与伪寡毛双眉虫做了形态学重描述.盾圆双眉虫与前人所报道的种群具有十分相似的纤毛图式,但在额-腹棘毛分布、大核片段、小膜及背触毛数目等方面表现出细微的变异性.此外,该青岛种群个体较小.统计学比较还表明,迄今缺乏研究的一海洋种,泥生双眉虫极可能为盾圆双眉虫(Diophrys scutum)的同物异名.伪寡毛双眉虫(Diophrys apoligothrix)为一新近报道的罕见种,研究基于新采集种群对其进行了补充性观察和描述.%Diophrys species are a group of marine cosmopolitan free-living ciliates, therefore there are many reports concerning their morphology and diversity. However, species identification remains problematic owing to the fact that many previous descriptions were basically based on live observation and morphometric, and infraciliature data still remain lacking for some known species. The aims of this paper were to supply new information and to clarify confusions of two known Diophrys species, D. scutum (Dujardin, 1841) Kahl, 1932 and D. apoligothrix Song et al, 2009. Both organisms were collected from the upper layer of sandy sediments in the intertidal region in Qingdao, China, where the water temperature was about 18 ℃ and the salinity was 18‰. After isolation, pure cultures were kept, to which some rice grains were added to enrich bacterial food. Ciliates were examined in vivo using bright field and differential interference contrast microscopy. The infraciliature was revealed with protargol staining method. Counts and measurements of stained specimens were performed at a magnification of 1250 ×. Based on present and previous studies, an improved diagnosis was presented here for D. scutum: marine Diophrys, broadly oval body outline, in vivo 80-200 μm long;43-80 adoral membranelles and the distal end of adoral zone was strongly curved; 5-8 frontoventral, 5-6 transverse,2

  6. THE ESTABLISHMENT OF A NEW OLIGOTRICH GENUS VARISTROMBIDIUM GEN.NOV.AND THE MORPHOLOGY AND PHYLOGENY OF A MARINE CILIATE, VARISTROMBIDIUM KIELUM (MAEDA AND CAREY,1985)NOV.COMB.(PROTISTA,CILIOPHORA)%寡毛类纤毛虫变游虫新属的建立及基尔变游虫(新属,新组合)的形态学重描述与系统地位分析

    Institute of Scientific and Technical Information of China (English)

    徐大鹏; 孙萍; John C.CLAMP; 马洪钢; 宋微波

    2011-01-01

    A Chinese population of the oligotrich ciliate Strombidium kielum Maeda & Carey,1985 was discovered in sand on the coast of Qingdao,China,and an analysis of morphological data from live cells and protargol preparations allowed this poorly described species to be redefined.A unique,heretofore undescribed pattern of somatic ciliation was discovered that revealed this species to be separated from other taxa in its family at the genetic level.Therefore,it was assigned to the new genus Varistrombidium,which is characterized by possession of 5 somatic kineties that run obliquely across the ventral side of the cell and having somatic kinedes 1 and 2 extending to the dorsal side and ending at the caudal area.Also,the secondary structure of variable region 2 of SSrRNA gene in V.kielum was predicted and compared with its morphologically similar congeners.Furthermore,some supplementary data of Apostrombidium pseudokiekum Xu et al.,2009,a newly reported organism,is also provided.%利用蛋白银染色技术对采自青岛沿海砂隙的寡毛类纤毛虫Strombidium kielum进行了形态学重描述,发现该种在寡毛类纤毛虫中具有独一无二的纤毛下器模式,因此为其建立了1新属Varistrombidium,特征为具有5条斜穿虫体的体动基列,其中体动基列l和2延伸到虫体背部,终止于虫体尾端.对Varistrombidium kielum(Maeda&Carey,1985) nov.comb.的小亚基RNA序列分析表明,该种位于Strombidiidae科内,与其形态学相近种Omegastrombidium elegans聚在一起.同时对其小亚基RNA序列可变区2的二级结构进行了预测并与其形态学相似种进行了比较.还对Apostrombidium pseudokielum Xu et al.,2009进行了补充性描述.

  7. Ecotoxicity assessment using ciliate cells in millifluidic droplets.

    Science.gov (United States)

    Illing, Rico; Burkart, Corinna; Pfitzner, Daniel; Jungmann, Dirk; Baraban, Larysa; Cuniberti, Gianaurelio

    2016-03-01

    Precise analysis of the aquatic cells and their responses to the toxic chemicals, i.e., water disinfective agents, is of crucial importance due to their role in the ecosystem. We demonstrate the application of the droplets based millifluidic tool for isolating and longtime monitoring of single Paramecium tetraurelia cells using a large number of water-in-oil emulsion droplets. Due to the automated monitoring of the fluorescence signal, the droplets containing cells are distinguished from the empty reservoirs. A viability indicator is used to follow the metabolic dynamic of the cells in every single droplet. Finally, we perform ecotoxicity tests in droplets, exposing the encapsulated paramecia cells to silver nitrate for determination of EC50 levels, and compare the output with the conventional microtiter plate assay. PMID:27051472

  8. Act together - implications of symbioses in aquatic ciliates

    DEFF Research Database (Denmark)

    Dziallas, Claudia; Allgaier, Martin; Monaghan, Michael T.;

    2012-01-01

    are globally distributed and have been intensively studied in the context of plastid evolution. Their relatively large cell size offers an ideal habitat for numerous microorganisms with different functional traits including commensalism and parasitism. Phagocytosis facilitates the formation of symbiotic...... relationships, particularly since some ingested microorganisms can escape the digestion. For example, photoautotrophic algae and methanogens represent endosymbionts that greatly extend the biogeochemical functions of their hosts. Consequently, symbiotic relationships between protists and prokaryotes...

  9. Macroalgal decomposition: Laboratory studies with particular regard to microorganisms and meiofauna

    Science.gov (United States)

    Rieper-Kirchner, M.

    1990-09-01

    The microbial degradation of North Sea macroalgae was studied in laboratory microcosms, containing autoclaved seawater and a mixture of equal parts of air-dried Delesseria sanguinea, Ulva lactuca, and Laminaria saccharina (red, green and brown algae, respectively). To determine the influence of different organisms on the decomposition rate (expressed in terms of algal dry weight loss relative to the material present at time zero) and their development during decomposition processes, yeast, flagellates, ciliates, nematodes and a harpacticoid copepod species were introduced to the microcosms. Results show that microbial degradation compared to the controls was enhanced in the presence of non-axenic nematodes ( Monhystera sp.) and protozoans, including bacterivorous ciliates ( Euplotes sp. and a Uronema-like sp.) and flagellates. No enhancement occurred with yeast ( Debaryomyces hansenii) or with the harpacticoid copepod Tisbe holothuriae. The most rapid algal dry weight loss (78.7% after 14 d at 18°C) occurred with the addition of raw seawater sampled near benthic algal vegetation and containing only the natural microorganisms present. These consisted mainly of bacteria with different morphological properties, whereby their numbers alone (viable counts) could not be correlated with algal dry weight loss. Although no single dominant species could be determined, lemon yellow pigmented colonies were frequently found. During decomposition in all microcosms the formation of algal particles 40 400 μm was observed, which were rapidly colonized by the other organisms present.

  10. Uncovering the diversity in the Amazophrynella minuta complex: integrative taxonomy reveals a new species of Amazophrynella (Anura, Bufonidae) from southern Peru

    Science.gov (United States)

    Rojas, Rommel R.; Chaparro, Juan C.; Carvalho, Vinícius Tadeu De; Ávila, Robson W.; Farias, Izeni Pires; Hrbek, Tomas; Gordo, Marcelo

    2016-01-01

    Abstract A new species of the genus Amazophrynella (Anura, Bufonidae) is described from the departments of Madre de Dios, Cusco and Junin in Peru. An integrative taxonomy approach is used. A morphological diagnosis, morphometrics comparisons, description of the advertisement call, and the phylogenetic relationships of the new species are provided. Amazophrynella javierbustamantei sp. n. differs from other species of Amazophrynella by: intermediate body-size (snout-vent length 14.9 mm in males, n = 26 and 19.6 mm in females, n = 20), tuberculate skin texture of body, greatest hand length of the Amazophrynella spp. (3.6 mm in males, n = 26 and 4.6 mm in females, n = 20), venter coloration yellowish, tiny rounded black points covering the venter, and thirteen molecular autapomorphies in the 16S RNA gene. Its distribution varies from 215 to 708 m a.s.l. This discovery highlights the importance of the remnant forest in preserving the biodiversity in Peru, and increase in seven the species formally described in the genus Amazophrynella. PMID:27047239

  11. Effects of elevated temperature on the toxicity of copper and oxytetracycline in the marine model, Euplotes crassus: a climate change perspective.

    Science.gov (United States)

    Gomiero, A; Viarengo, A

    2014-11-01

    Trace metals and broad-spectrum antibiotic drugs are common environmental contaminants, the importance of which is increasing due to global climate change-related effects. In the present study, the biological model organism E. crassus was first acclimated to five temperatures, from 25 °C to 33 °C, followed by exposure to nominal concentrations of copper, the antibiotic model compound oxytetracycline and mixtures of both, at increasing thermal conditions. Variations of temperature-related toxicity were assessed by two high-level endpoint tests, survival and replication rates, and two sublethal parameters: endocytosis rate and lysosomal membrane stability. The selected toxicants presented opposite behaviours as the protozoa's survival rates increased following an increasing thermal gradient in the oxytetracycline-related treatments, and a decline of tolerance in metal-related treatments was observed. Results of tests combining binary mixtures of tested toxicants showed a complex pattern of responses.

  12. A Cladistic Approach for the Classification of Oligotrichid Ciliates (Ciliophora: Spirotricha).

    Science.gov (United States)

    Agatha, Sabine

    2004-01-01

    Currently, gene sequence genealogies of the Oligotrichea Bütschli, 1889 comprise only few species. Therefore, a cladistic approach, especially to the Oligotrichida, was made, applying Hennig's method and computer programs. Twenty-three characters were selected and discussed, i.e., the morphology of the oral apparatus (five characters), the somatic ciliature (eight characters), special organelles (four characters), and ontogenetic particulars (six characters). Nine of these characters developed convergently twice. Although several new features were included into the analyses, the cladograms match other morphological trees in the monophyly of the Oligotrichea, Halteriia, Oligotrichia, Oligotrichida, and Choreotrichida. The main synapomorphies of the Oligotrichea are the enantiotropic division mode and the de novo-origin of the undulating membranes. Although the sister group relationship of the Halteriia and the Oligotrichia contradicts results obtained by gene sequence analyses, no morphologic, ontogenetic or ultrastructural features were found, which support a branching of Halteria grandinella within the Stichotrichida. The cladistic approaches suggest paraphyly of the family Strombidiidae probably due to the scarce knowledge. A revised classification of the Oligotrichea is suggested, including all sufficiently known families and genera.

  13. Comparative Proteome Bioinformatics: Identification of Phosphotyrosine Signaling Proteins in the Unicellular Protozoan Ciliate Tetrahymena

    DEFF Research Database (Denmark)

    Gammeltoft, Steen; Christensen, Søren Tvorup; Joachimiak, Marcin;

    2005-01-01

    Tetrahymena, bioinformatics, cilia, evolution, signaling, TtPTK1, PTK, Grb2, SH-PTP 2, Plcy, Src, PTP, PI3K, SH2, SH3, PH......Tetrahymena, bioinformatics, cilia, evolution, signaling, TtPTK1, PTK, Grb2, SH-PTP 2, Plcy, Src, PTP, PI3K, SH2, SH3, PH...

  14. Amebae and ciliated protozoa as causal agents of waterborne zoonotic disease.

    Science.gov (United States)

    Schuster, Frederick L; Visvesvara, Govinda S

    2004-12-01

    The roles free-living amebae and the parasitic protozoa Entamoeba histolytica and Balantidium coli play as agents of waterborne zoonotic diseases are examined. The free-living soil and water amebae Naegleria fowleri, Acanthamoeba spp., and Balamuthia mandrillaris are recognized etiologic agents of mostly fatal amebic encephalitides in humans and other animals, with immunocompromised and immunocompetent hosts among the victims. Acanthamoeba spp. are also agents of amebic keratitis. Infection is through the respiratory tract, breaks in the skin, or by uptake of water into the nostrils, with spread to the central nervous system. E. histolytica and B. coli are parasitic protozoa that cause amebic dysentery and balantidiasis, respectively. Both intestinal infections are spread via a fecal-oral route, with cysts as the infective stage. Although the amebic encephalitides can be acquired by contact with water, they are not, strictly speaking, waterborne diseases and are not transmitted to humans from animals. Non-human primates and swine are reservoirs for E. histolytica and B. coli, and the diseases they cause are acquired from cysts, usually in sewage-contaminated water. Amebic dysentery and balantidiasis are examples of zoonotic waterborne infections, though human-to-human transmission can occur. The epidemiology of the diseases is examined, as are diagnostic procedures, anti-microbial interventions, and the influence of globalization, climate change, and technological advances on their spread. PMID:15567581

  15. Molecular phylogeny of litostome ciliates (Ciliophora, Litostomatea) with emphasis on free-living haptorian genera.

    Science.gov (United States)

    Strüder-Kypke, Michaela C; Wright, Andre-Denis G; Foissner, Wilhelm; Chatzinotas, Antonis; Lynn, Denis H

    2006-08-01

    The monophyly of the litostomes was tested using nine newly sequenced and four previously unpublished small subunit ribosomal RNA (SSrRNA) gene sequences from free-living Haptoria as well as from endosymbiotic Trichostomatia: the vestibuliferids Balantidium coli and Isotricha prostoma, the cyclotrichiid Mesodinium pulex, and the haptorids Loxophyllum rostratum, Dileptus sp., Enchelyodon sp., Enchelys polynucleata, Epispathidium papilliferum (isolates A and B), Spathidium stammeri, Arcuospathidium muscorum, Arcuospathidium cultriforme, and the unusual Teuthophrys trisulca. Phylogenetic analyses depicted the litostomes as a monophyletic group consisting of the trichostomes (subclass Trichostomatia) and the free-living haptorians (subclass Haptoria). The cyclotrichiids Mesodinium and Myrionecta (order Cyclotrichiida) branched either basally within or outside the Litostomatea. In most analyses, the haptorians did not receive support as a monophyletic group. Instead, Dileptus branched basally to all litostome taxa, and Epispathidium papilliferum grouped with the Subclass Trichostomatia. Some subgroupings, however, of haptorian genera corresponded to suggested superfamilial taxa (e.g., orders Spathidiida and Pleurostomatida). Within the monophyletic trichostomes, we can distinguish three clades: (1) an Australian clade; (2) the order Entodiniomorphida; and (3) the order Vestibuliferida. However, Balantidium, currently classified in the Vestibuliferida, did not group with the other vestibuliferids, suggesting that this order may be paraphyletic. PMID:16843062

  16. An electron microscopic study of the phosphatases in the ciliate Balantidium coli.

    Science.gov (United States)

    Skotarczak, B; Kołodziejczyk, L

    2005-11-01

    The localisation and activity of D glucose-6-phosphatase (G-6-Pase) and alkaline phosphatase (AlP) in the trophozoites of Balantidium coli isolated from pig intestine content were investigated using ultrastructural and cytochemical methods. The activity of G-6-Pase was demonstrated on the membranes of the endoplasmic reticulum, particularly in the cortical part of the trophozoites. In addition, the product of the reaction to G-6-Pase was concentrated in the vesicular structures, which were distributed along the reticular membranes. These structures were described as vesicles similar to glycosomes, containing enzymes of glycogenolysis. It is very likely that hydrolases in B. coli are formed on the rough reticular membranes without the involvement of cisterns of the Golgi complex. The ultrastructural deposits of the reaction to G-6-Pase and AlP in the trophozoites of B. coli described here indicate that some membranes of the rough endoplasmic reticulum and small vacuoles with a strong reaction to these enzymes can play a similar role to the Golgi complex. PMID:16425154

  17. Immunostaining Phospho-epitopes in Ciliated Organs of Whole Mount Zebrafish Embryos.

    Science.gov (United States)

    Rothschild, Sarah C; Francescatto, Ludmila; Tombes, Robert M

    2016-01-01

    The rapid proliferation of cells, the tissue-specific expression of genes and the emergence of signaling networks characterize early embryonic development of all vertebrates. The kinetics and location of signals - even within single cells - in the developing embryo complements the identification of important developmental genes. Immunostaining techniques are described that have been shown to define the kinetics of intracellular and whole animal signals in structures as small as primary cilia. The techniques for fixing, imaging and processing images using a laser-scanning confocal compound microscope can be completed in as few as 36 hr. Zebrafish (Danio rerio) is a desirable organism for investigators who seek to conduct studies in a vertebrate species that is affordable and relevant to human disease. Genetic knockouts or knockdowns must be confirmed by the loss of the actual protein product. Such confirmation of protein loss can be achieved using the techniques described here. Clues into signaling pathways can also be deciphered by using antibodies that are reactive with proteins that have been post-translationally modified by phosphorylation. Preserving and optimizing the phosphorylated state of an epitope is therefore critical to this determination and is accomplished by this protocol. This study describes techniques to fix embryos during the first 72 hr of development and co-localize a variety of relevant epitopes with cilia in the Kupffer's Vesicle (KV), the kidney and the inner ear. These techniques are straightforward, do not require dissection and can be completed in a relatively short period of time. Projecting confocal image stacks into a single image is a useful means of presenting these data. PMID:26967668

  18. Ciliate protozoa of the forestomach of llamas (Lama glama) from locations at different altitude in Argentina.

    Science.gov (United States)

    Cucchi, María Cerón; Marcoppido, Gisela; Dekker, Anna; Fondevila, Manuel; Fuente, Gabriel De La; Morici, Gabriel; Cravero, Silvio

    2016-01-01

    This study describes the diversity and concentration of the protozoal population from the forestomach of llamas in Argentina at three altitudinal locations. Protozoal diversity was studied in samples from eight llamas from Hurlingham (Buenos Aires, 43 m altitude), four from Tilcara (Jujuy, 2465 m altitude) and six llamas from Cieneguillas (Jujuy, 3800 m altitude). The total concentrations of protozoa in the forestomach contents were 7.9, 9.1 and 4.1 cells x 104 ml-1 in Hurlingham, Tilcara and Cieneguillas, respectively (P>0.05). Entodinium spp. represented 97.9, 92.3 and 71.4% of the protozoal community in Hurlingham, Tilcara and Cieneguillas, respectively, and the remaining protozoa belonged to the Eudiplodinium genus. Entodinium spp. were identified as E. caudatum (mostly morphotype dubardi), E. longinucleatum, E. parvum, E. bovis, E. exiguum, E. dubardi, and a minor presence of E. bimastus (in three animals) and E. ovibos (in one animal). In regards to the rest of protozoal species, Eudiplodinium maggii is the first reported host record for the genus in llamas. This species was present in the forestomach of 14 out of 18 llamas tested, and in one case it was the unique protozoal species. The vestibuliferids, Dasytricha and Isotricha were absent from the forestomach of llamas. Similarly, other species such as those from the Caloscolex genus, Diplodinium cameli and Entodinium ovumrajae, commonly found in Old World Camelids, were also absent from llamas. PMID:27395861

  19. Contribution by the methanogenic endosymbionts of anaerobic ciliates to methane production in Dutch freshwater sediments

    NARCIS (Netherlands)

    Hoek, van A.H.A.M.; Alen, T.A.; Vogels, G.D.; Hackstein, J.H.P.

    2006-01-01

    Biogenic methane contributes substantially to the atmospheric methane concentration and thus to global warming. This trace gas is predominantly produced by strictly anaerobic methanogenic archaea, which thrive in the most divergent ecological niches, e. g. paddy fields, sediments, landfills, and the

  20. Effects of a ciliate protozoa predator on microbial communities in pitcher plant (Sarracenia purpurea leaves.

    Directory of Open Access Journals (Sweden)

    Taylor K Paisie

    Full Text Available The aquatic communities found within the water filled leaves of the pitcher plant, Sarracenia purpurea, have a simple trophic structure providing an ideal system to study microscale interactions between protozoan predators and their bacterial prey. In this study, replicate communities were maintained with and without the presence of the bactivorous protozoan, Colpoda steinii, to determine the effects of grazing on microbial communities. Changes in microbial (Archaea and Bacteria community structure were assessed using iTag sequencing of 16S rRNA genes. The microbial communities were similar with and without the protozoan predator, with>1000 species. Of these species, Archaea were negligible, with Bacteria comprising 99.99% of the microbial community. The Proteobacteria and Bacteroidetes were the most dominant phyla. The addition of a protozoan predator did not have a significant effect on microbial evenness nor richness. However, the presence of the protozoan did cause a significant shift in the relative abundances of a number of bacterial species. This suggested that bactivorous protozoan may target specific bacterial species and/or that certain bacterial species have innate mechanisms by which they evade predators. These findings help to elucidate the effect that trophic structure perturbations have on predator prey interactions in microbial systems.

  1. The ciliate Paramecium shows higher motility in non-uniform chemical landscapes.

    Science.gov (United States)

    Giuffre, Carl; Hinow, Peter; Vogel, Ryan; Ahmed, Tanvir; Stocker, Roman; Consi, Thomas R; Strickler, J Rudi

    2011-04-11

    We study the motility behavior of the unicellular protozoan Paramecium tetraurelia in a microfluidic device that can be prepared with a landscape of attracting or repelling chemicals. We investigate the spatial distribution of the positions of the individuals at different time points with methods from spatial statistics and Poisson random point fields. This makes quantitative the informal notion of "uniform distribution" (or lack thereof). Our device is characterized by the absence of large systematic biases due to gravitation and fluid flow. It has the potential to be applied to the study of other aquatic chemosensitive organisms as well. This may result in better diagnostic devices for environmental pollutants.

  2. The ciliate Paramecium shows higher motility in non-uniform chemical landscapes.

    Directory of Open Access Journals (Sweden)

    Carl Giuffre

    Full Text Available We study the motility behavior of the unicellular protozoan Paramecium tetraurelia in a microfluidic device that can be prepared with a landscape of attracting or repelling chemicals. We investigate the spatial distribution of the positions of the individuals at different time points with methods from spatial statistics and Poisson random point fields. This makes quantitative the informal notion of "uniform distribution" (or lack thereof. Our device is characterized by the absence of large systematic biases due to gravitation and fluid flow. It has the potential to be applied to the study of other aquatic chemosensitive organisms as well. This may result in better diagnostic devices for environmental pollutants.

  3. New records of epibiont Ciliates (Ciliophora) from Indian coast with descriptions of six new species

    Digital Repository Service at National Institute of Oceanography (India)

    Chatterjee, T.; Fernandez-Leborans, G.; Ramteke, D.; Ingole, B.S.

    lining or septum that can contain a mesostyle. The zooid may attach to lorica directly or via a endostyle (Warren & Paynter, 1991; Lynn & Small, 2000). Cothurnia palkensis sp. nov. (Figs. 2, 16, 17) Locality Palk Bay Stn. 22 Etymology Named... and can occupy only the posterior area of the lorica. Mesostyle and endostyle are conspicuous and broad. The external stalk was short and attached via a large disk (Figs. 3, 18, 19). Measurements: lorica length, 51.0-55.5 µm; lorica width (maximum...

  4. Sulfide assimilation by ectosymbionts of the sessile ciliate, Zoothamnium niveum

    DEFF Research Database (Denmark)

    Røy, Hans; Vopel, Kay; Huettel, Marcus;

    2009-01-01

    was the free-flowing water although the size of the colonies suggests that they live partly submerged in the diffusive boundary layer. We showed that the filtered volume allows Z. niveum to assimilate sufficient sulfide to sustain the symbiosis at a few micromoles per liter in ambient concentration. Numerical...

  5. Reduced fecundity in small populations of the rare plant Gentianopsis ciliate (Gentianaceae)

    Science.gov (United States)

    Kery, M.; Matthies, D.

    2004-01-01

    Habitat destruction is the main cause for the biodiversity crisis. Surviving populations are often fragmented, i.e., small and isolated from each other. Reproduction of plants in small populations is often reduced, and this has been attributed to inbreeding depression, reduced attractiveness for pollinators, and reduced habitat quality in small populations. Here we present data on the effects of fragmentation on the rare, self-compatible perennial herb Gentianopsis ciliata (Gentianaceae), a species with very small and presumably well-dispersed seeds. We studied the relationship between population size, plant size, and the number of flowers produced in 63 populations from 1996-1998. In one of the years, leaf and flower size and the number of seeds produced per fruit was studied in a subset of 25 populations. Plant size, flower size, and the number of seeds per fruit and per plant increased with population size, whereas leaf length and the number of flowers per plant did not. The effects of population size on reproduction and on flower size remained significant if the effects were adjusted for differences in plant size, indicating that they could not be explained by differences in habitat quality. The strongly reduced reproduction in small populations may be due to pollination limitation, while the reduced flower size could indicate genetic effects.

  6. Ciliated cultured dermal fibroblasts in a patient with hyperornithinemia, hyperammonemia and homocitrullinuria (HHH) syndrome.

    Science.gov (United States)

    Haust, M D

    1995-10-01

    Hyperornithinemia, hyperammonemia and homocitrullinuria (HHH)-syndrome is a rare autosomal recessive disorder of the urea cycle, probably caused by a defect in ornithine transport across the hepatic inner mitochondrial membrane. Single rudimentary cilia were present in approximately ten percent of post-divisional or dividing fibroblasts cultured from the skin of a patient with the HHH-syndrome, whereas no such organelles were observed in dermal fibroblasts cultured from normal controls. Since single rudimentary ("primary," "oligo," "solitary") cilia have been observed in a variety of cells in animals and men but the stimuli for their formation and their significance remain controversial, a brief report on their presence in the as yet unreported condition (HHH-syndrome) was considered of interest; hopefully, it might contribute to the ultimate unravelling of some of the unresolved problems. It is of note that unlike the author's previous findings of these unusual organelles in cells affected by a pathological process (atherosclerosis), the rudimentary cilia were observed in the present instance in dividing or postdivisional cells. The implications of these (and other) observations must await further work.

  7. Functional intron+ and intron- rDNA in the same macronucleus of the ciliate Tetrahymena pigmentosa

    DEFF Research Database (Denmark)

    Nielsen, Henrik; Engberg, J

    1985-01-01

    alleles was followed in the total culture and in single cells during their vegetative segregation and it was observed that replication was non-preferential with respect to the two alleles. The diallelic clones were also used to demonstrate that intron-containing rDNA was transcribed and the transcript......Diallelic clones of Tetrahymena pigmentosa containing equal amounts of intron+ and intron- rDNA in the macronucleus were constructed. The macronucleus of the resulting strains divides amitotically during vegetative growth and the diallelic genotype is therefore unstable. The coexistence of the two...

  8. Judíos y redes personales en Tierra de Campos durante la segunda mitad del siglo XV: un Cuaderno de Minutas de Avecindamientos de Villalón

    Directory of Open Access Journals (Sweden)

    Castaño, Javier

    2009-12-01

    Full Text Available In the middle decades of the fifteenth century Jews were registered as local citizens in the municipal council records of individual Castilian towns. Traditionally, a citizen was recorded as belonging to a parish or parochial neighborhood within the local political community; this would exclude Jews by definition as they were designated separately as a religious caste. The study of unpublished documents related to the Castilian locale of Villalón –characterized by the economic importance of its fairs promoted by the 4th count of Benavente– in the region of Tierra de Campos during a period of general political disorder, records that the municipal council assigned citizenship to Jews in relation to their community (aljama through which specific aspects of their lives were regulated, and by which the local council rather than other political instances assumed control of that community. With the help of other primary sources, these documents reveal the suggestion of personal networks in which Jewish physicians play a key role.

    En las décadas centrales del siglo XV algunos judíos fueron inscritos por las autoridades concejiles como vecinos en distintas localidades castellanas. Tradicionalmente, la vecindad se había caracterizado como una categoría de pertenencia a una comunidad política local, cuya participación estaría vetada a los judíos al considerarlos como una casta religiosa. Partiendo del estudio de documentación inédita relativa a la localidad castellana de Villalón –en un momento de auge de sus ferias impulsadas por el IV conde de Benavente– en Tierra de Campos, durante los años de desorden político general del reino, se propone una interpretación del avecindamiento de judíos que privilegia las relaciones de subordinación de la aljama respecto del concejo. Con ayuda de otras fuentes documentales, se ofrece un esbozo de las redes personales de judíos, subrayando el protagonismo de los médicos.

  9. Uptake and degradation of discharged produced water components in marine microorganisms

    Energy Technology Data Exchange (ETDEWEB)

    Brakstad, O.G.; Olsen, A.J.; Nordtug, T. [and others

    1996-12-31

    Produced waters from offshore oil production are a significant source of aromatic compounds discharged to the seawater. Exposure studies have revealed toxic effects of alkylated phenols and PAH compounds to various marine organisms. In this study the fate of aromatic compounds in seawater was investigated, using a dynamic exposure system which simulated dilution effects of discharged chemicals and {open_quotes}natural{close_quotes} conditions in the seawater recipient. {sup 14}C-labelled alkylated phenols (para-cresol) and polyaromatic hydrocarbons (PAH; naphthalene or phenanthrene) were applied to exposure tanks at sub-ppb concentrations by the aid of a computer-controlled injector device. Natural seawater, with normal seawater bacteria, cultures of the phytoplankton Isochrysis galbana, or the ciliate Euplotes bisulcatus, passed the exposure system at a residence time of approximately 5 hours, creating a short and defined exposure time between compounds and microorganisms. Compounds bound to or taken up by the organisms were collected on filters downstream the exposure system. The results showed that marine microorganisms may take up portions of aromatic compounds within a short period of time. Uptake mechanisms were expected to be passive events. Comparison of bioconcentration factors to the water-octanol coefficients of the components indicated alternative uptake mechanisms to a passive incorporation in the lipid membranes of the organisms. Binding to surface protein and carbohydrate moieties may play a central role during uptake. Studies in static systems with exposure of components to normal seawater bacteria showed a significant uptake and mineralization only for p-cresol. Standard seawater BOD testing indicated that all compounds tested were potentially biodegradable in normal non-acclimated seawater. The results demonstrate that uptake and degradation of produced water components are important to consider during studies of the fate of these components.

  10. Recent evidence for evolution of the genetic code

    Science.gov (United States)

    Osawa, S.; Jukes, T. H.; Watanabe, K.; Muto, A.

    1992-01-01

    The genetic code, formerly thought to be frozen, is now known to be in a state of evolution. This was first shown in 1979 by Barrell et al. (G. Barrell, A. T. Bankier, and J. Drouin, Nature [London] 282:189-194, 1979), who found that the universal codons AUA (isoleucine) and UGA (stop) coded for methionine and tryptophan, respectively, in human mitochondria. Subsequent studies have shown that UGA codes for tryptophan in Mycoplasma spp. and in all nonplant mitochondria that have been examined. Universal stop codons UAA and UAG code for glutamine in ciliated protozoa (except Euplotes octacarinatus) and in a green alga, Acetabularia. E. octacarinatus uses UAA for stop and UGA for cysteine. Candida species, which are yeasts, use CUG (leucine) for serine. Other departures from the universal code, all in nonplant mitochondria, are CUN (leucine) for threonine (in yeasts), AAA (lysine) for asparagine (in platyhelminths and echinoderms), UAA (stop) for tyrosine (in planaria), and AGR (arginine) for serine (in several animal orders) and for stop (in vertebrates). We propose that the changes are typically preceded by loss of a codon from all coding sequences in an organism or organelle, often as a result of directional mutation pressure, accompanied by loss of the tRNA that translates the codon. The codon reappears later by conversion of another codon and emergence of a tRNA that translates the reappeared codon with a different assignment. Changes in release factors also contribute to these revised assignments. We also discuss the use of UGA (stop) as a selenocysteine codon and the early history of the code.

  11. Laparoscopic excision of a ciliated hepatic foregut cyst in a child: A case report and review of the literature

    Directory of Open Access Journals (Sweden)

    Nicholas E. Bruns

    2015-12-01

    Conclusion: This case report suggests that laparoscopy may be safe and effective for resection of CHFCs with favorable anatomy such as peripheral location and noninvolvement of key vascular and biliary structures.

  12. Age-dependent occurrence of the intestinal ciliate Balantidium coli in pigs at a Danish research farm.

    Science.gov (United States)

    Hindsbo, O; Nielsen, C V; Andreassen, J; Willingham, A L; Bendixen, M; Nielsen, M A; Nielsen, N O

    2000-01-01

    A cross sectional study of the prevalence and intensity of Balantidium coli in pigs was carried out on a Danish research farm. The prevalence of B. coli infection increased from 57% in suckling piglets to 100% in most pig groups > or = 4 weeks old. The mean number of cysts per gram faeces (CPG) of pigs aged 12 weeks and younger were 52 weeks had significantly higher counts of > or = 865 CPG. Although some lactating sows had very high CPG's, no significant differences in CPG could be detected between the intensities of pregnant sows, lactating sows and empty and dry sows. No human cases of B. coli infection have been published in Denmark though it is zoonotic. PMID:10920478

  13. 纤毛虫中的编程性翻译移码%Programmed translational frameshifting in ciliates

    Institute of Scientific and Technical Information of China (English)

    李禄琴; 胡苗清; 梁爱华

    2014-01-01

    编程性翻译移码现象存在于病毒、原核生物和真核生物中.单细胞真核生物游仆虫基因组中含有的编程性翻译移码基因远远高于其他真核生物基因组.游仆虫中已经报道的编程性翻译移码基因的滑动序列特征为AAA-UAR-V,其上游都有SD(Shine-Dalgarno sequence)相似序列CAAGAA.同时,编程性移码的发生受肽链释放因子eRF1和tRNALys的影响.

  14. ROLE OF CA2+ AND CAMP IN A CELL SIGNALING PATHWAY FOR RESTING CYST FORMATION OF CILIATED PROTOZOAN COLPODA CUCULLUS

    OpenAIRE

    Matsuoka, Tatsuomi; Kondoh, Asuka; Sabashi, Kunihisa; Nagano, Nobuaki; Akematsu, Takahiko; Kida, Akemi; Iino, Ryota

    2009-01-01

    Resting cyst formation (encystment) of Colpoda cucullus is caused by an increase in an external Ca2+ concentration or overpopulation of Colpoda vegetative cells. The Ca2+-mediated or overpopulation-mediated encystment was suppressed by Ca2+ channel blockers (Cd2+, La3+, Ni2+), Ca2+-chelating reagents (EGTA, BAPTA), calmodulin antagonists (W-7, trifluoperazine), Rp-cAMPS (an cAMP analog antagonist) and 2-deoxyadenosine (a P-site inhibitor of adenylate cyclase). On the other hand, by the additi...

  15. TPP1 is a homologue of ciliate TEBP-β and interacts with POT1 to recruit telomerase

    Science.gov (United States)

    Xin, Huawei; Liu, Dan; Wan, Ma; Safari, Amin; Kim, Hyeung; Sun, Wen; O'Connor, Matthew S.; Songyang, Zhou

    2007-02-01

    Telomere dysfunction may result in chromosomal abnormalities, DNA damage responses, and even cancer. Early studies in lower organisms have helped to establish the crucial role of telomerase and telomeric proteins in maintaining telomere length and protecting telomere ends. In Oxytricha nova, telomere G-overhangs are protected by the TEBP-α/β heterodimer. Human telomeres contain duplex telomeric repeats with 3' single-stranded G-overhangs, and may fold into a t-loop structure that helps to shield them from being recognized as DNA breaks. Additionally, the TEBP-α homologue, POT1, which binds telomeric single-stranded DNA (ssDNA), associates with multiple telomeric proteins (for example, TPP1, TIN2, TRF1, TRF2 and RAP1) to form the six-protein telosome/shelterin and other subcomplexes. These telomeric protein complexes in turn interact with diverse pathways to form the telomere interactome for telomere maintenance. However, the mechanisms by which the POT1-containing telosome communicates with telomerase to regulate telomeres remain to be elucidated. Here we demonstrate that TPP1 is a putative mammalian homologue of TEBP-β and contains a predicted amino-terminal oligonucleotide/oligosaccharide binding (OB) fold. TPP1-POT1 association enhanced POT1 affinity for telomeric ssDNA. In addition, the TPP1 OB fold, as well as POT1-TPP1 binding, seemed critical for POT1-mediated telomere-length control and telomere-end protection in human cells. Disruption of POT1-TPP1 interaction by dominant negative TPP1 expression or RNA interference (RNAi) resulted in telomere-length alteration and DNA damage responses. Furthermore, we offer evidence that TPP1 associates with the telomerase in a TPP1-OB-fold-dependent manner, providing a physical link between telomerase and the telosome/shelterin complex. Our findings highlight the critical role of TPP1 in telomere maintenance, and support a yin-yang model in which TPP1 and POT1 function as a unit to protect human telomeres, by both positively and negatively regulating telomerase access to telomere DNA.

  16. Increased fucosyl glycoconjugate by Mycoplasma hyopneumoniae enhances adherences of Pasteurella multocida type A in the ciliated epithelial cells of the respiratory tract

    OpenAIRE

    Park, Changhoon; Jeong, Jiwoon; KANG, Ikjae; Choi, Kyuhyung; Park, Su-Jin; Chae, Chanhee

    2016-01-01

    Background The objective of this study was to elucidate the pathogenic mechanisms of how Mycoplasma hyopneumoniae enhances secondary Pasteurella multocida type A infection which leads to porcine enzootic pneumonia in infected pigs. Sixteen pigs were experimentally infected with M. hyopneumoniae and then euthanized at 7, 14, 21 and 28 days post inoculation. In situ hybridization for M. hyopneumoniae DNA and Ulex europaeus agglutinin-I (UEA-I) lectin histochemistry for fucosyl glycoconjugate, w...

  17. Investigations of the effects of UV and X-ray radiation and the repair of radiation damage in the ciliate Stylonychia mytilus

    International Nuclear Information System (INIS)

    Using the example of Stylomychia mytilus, the effects of UV-radiation and ionizing X-ray radiation are compared. The effects on cell division and on the repair of radiation damage in DNA are compared. Sensitivity to UV radiation differs between the stages of the cell cycle while the effects of X-ray radiation are independent of phase. There is no difference in repair processes. (AJ) 891 AJ/AJ 892 MKO

  18. 纤毛虫与养殖刺参的"腐皮综合症"%Ciliates and “cankered cutis disease” of Apostichopus japonicus

    Institute of Scientific and Technical Information of China (English)

    刘晓云; 范瑞青; 谭金山; 高澜

    2005-01-01

    @@ 近年伴随刺参(Apostichopus japonicus)养殖业的快速发展,病害问题日趋突出.2004年山东沿海多处养殖海参发病,有些地方海参的死亡率高达50%以上.许多专家对刺参的病因和病原进行了研究,将发生于2004年春季的养殖刺参爆发性疾病称之为"腐皮综合症"或"化皮病",并定性其为细菌性疾病.

  19. 肺炎患者痰中检出纤毛虫1例%Ciliated protozoan in sputum of a pneumonia patient

    Institute of Scientific and Technical Information of China (English)

    陈志敏

    2007-01-01

    患者,女性,56岁,初中文化,绍兴市越城区人,现已退休,养鸟史2年余,无疫水接触史。2006年12月17日,因不明原因发热,来院就诊。主诉:畏寒,少量咳嗽,无痰。查体:体温高达40℃;血常规检查:白细胞总数7.9×109/L,中性粒细胞78.9%。血液沉降率9mm/h;血压120/90mmHg,

  20. Design and validation of four new primers for next-generation sequencing to target the 18S rRNA genes of gastrointestinal ciliate protozoa.

    Science.gov (United States)

    Ishaq, Suzanne L; Wright, André-Denis G

    2014-09-01

    Four new primers and one published primer were used to PCR amplify hypervariable regions within the protozoal 18S rRNA gene to determine which primer pair provided the best identification and statistical analysis. PCR amplicons of 394 to 498 bases were generated from three primer sets, sequenced using Roche 454 pyrosequencing with Titanium, and analyzed using the BLAST database (NCBI) and MOTHUR version 1.29. The protozoal diversity of rumen contents from moose in Alaska was assessed. In the present study, primer set 1, P-SSU-316F and GIC758R (amplicon of 482 bases), gave the best representation of diversity using BLAST classification, and the set amplified Entodinium simplex and Ostracodinium spp., which were not amplified by the other two primer sets. Primer set 2, GIC1080F and GIC1578R (amplicon of 498 bases), had similar BLAST results and a slightly higher percentage of sequences that were identified with a higher sequence identity. Primer sets 1 and 2 are recommended for use in ruminants. However, primer set 1 may be inadequate to determine protozoal diversity in nonruminants. The amplicons created by primer set 1 were indistinguishable for certain species within the genera Bandia, Blepharocorys, Polycosta, and Tetratoxum and between Hemiprorodon gymnoprosthium and Prorodonopsis coli, none of which are normally found in the rumen.

  1. The fenestrin antigen in submembrane skeleton of the ciliate Tetrahymena thermophila is proposed as a marker of cell polarity during cell division and in oral replacement.

    Science.gov (United States)

    Kaczanowska, Janina; Joachimiak, Ewa; Kiersnowska, Mauryla; Krzywicka, Anna; Golinska, Krystyna; Kaczanowski, Andrzej

    2003-07-01

    Tetrahymena thermophila cells have two types of polarized morphogenesis: divisional morphogenesis and oral reorganization (OR). The aim of this research is the analysis of cortical patterns of immunostaining during cell division and in OR using previously characterized antibodies against fenestrin and epiplasm B proteins. During cell division, the anarchic field of basal body proliferation of the new developing oral apparatus (AF) showed concomitant strong binding of the fenestrin antigen and withdrawal of a signal of the epiplasm B antigen. At a specific stage, the fenestrin antigen also appeared as a character of the anterior cortex pole, with a co-localized decrease in the detected epiplasm B antigen. The fenestrin antigen also showed a polarity of duplicating basal bodies in ciliary rows. Indirect immunofluorescence and immunogold labeling experiments were performed in the absence and presence of an inhibitor of activity of serine/threonine kinases, 6-dimethylaminopurine (6-DMAP) as an inducer of the oral replacement process. In the presence of 6-DMAP, one class of cells started OR, and some others were trapped and affected in cell division. Both types of cells showed an instability of oral structures and formed enlarged primordial oral fields. These anarchic fields (AFs) bind the fenestrin antigen, with disappearance of epiplasmic antigen staining. Only one protein (about 64 kDa) is detected in western blots by the anti-fenestrin antibody and it accumulated in 6-DMAP-treated cells that are involved in uncompleted morphogenetic activity. At a defined stage of oral development, both during cell division and in OR, the fenestrin antigen served as a marker of polarity of the cell of the anterior pole character.

  2. Repellent Activities of Essential Oils of Some Plants Used Traditionally to Control the Brown Ear Tick, Rhipicephalus appendiculatus

    NARCIS (Netherlands)

    Wanzala, W.W.; Hassanali, A.; Mukabana, W.R.; Takken, W.

    2014-01-01

    Essential oils of eight plants, selected after an ethnobotanical survey conducted in Bukusu community in Bungoma County, western Kenya (Tagetes minuta, Tithonia diversifolia, Juniperus procera, Solanecio mannii, Senna didymobotrya, Lantana camara, Securidaca longepedunculata, and Hoslundia opposita)

  3. AcEST: DK961946 [AcEST

    Lifescience Database Archive (English)

    Full Text Available quitin OS=Euplotes eurystomus PE=3 SV=1 79 5e-15 sp|P42740|UBIQ_AGLNE Ubiquitin OS=Aglaothamnion neglectum P...KTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59 >sp|P42740|UBIQ_AGLNE Ubiquitin OS=Aglaothamnion negl...ectum PE=3 SV=1 Length = 76 Score = 78.2 bits (191), Expect = 1e-14 Identities = 40

  4. Seasonal Changes of Planktonic Ciliate Communities in Yuexiu Lake, An Urban Lake of Guangzhou City%广州市区越秀湖浮游纤毛虫群落的季节变化

    Institute of Scientific and Technical Information of China (English)

    徐润林; 郑永利

    2000-01-01

    从1997年4月到1998年3月之间,应用定性观察和定量分析的方法对广州市的城市湖泊--越秀湖进行了浮游纤毛虫群落的种类组成、群落的生物多样性、丰度、生物量、优势种的种群季节变化等群落结构参数进行了研究.共发现了76种浮游纤毛虫;最大丰度为69.1×103ind.@L-1;最大生物量为7.16mg@L-1;群落中的优势种为大弹跳虫(Halteria grandinella ) 、尾毛虫(Urotricha spp.)、尾侠盗虫(Strobilidium caudatum) 、小侠盗虫(Strobilidium humile )和膜袋虫(Cyclidium spp.);群落的生物多样性指数在2.4到3.0之间.分析了这个湖泊浮游纤毛虫群落结构参数的季节变化.通过与文献报道的比较、分析,从纤毛虫的优势种、总丰度和生物量确定了该城市湖泊的富营养状况为重度富营养化.

  5. Description of two marine amphisiellid ciliates, Amphisiella milnei (Kahl, 1932) Horváth, 1950 and A. sinica sp. nov. (Ciliophora: Hypotrichia), with notes on their ontogenesis and SSU rDNA-based phylogeny.

    Science.gov (United States)

    Li, Liqiong; Zhao, Xiaolu; Ji, Daode; Hu, Xiaozhong; Al-Rasheid, Khaled A S; Al-Farraj, Saleh A; Song, Weibo

    2016-06-01

    The morphology and taxonomy of two marine Amphisiella species, isolated from mariculture waters in northern China, were investigated using standard techniques. One species corresponds well with the original description of the poorly known Amphisiella milnei (Kahl, 1932) Horváth, 1950 by remarkable characteristics, inter alia, (i) the additional cirri between the left frontal cirrus and the buccal cirrus, and (ii) ring-shaped structure in the anterior and posterior body portion (posterior one sometimes lacking). The detailed description of the cirral pattern and an informative ontogenetic stage first reveal that the additional cirri, which are uniformly absent in all congeners, originate from the frontal-ventral transverse cirral anlage I. The other species represents a new species of Amphisiella, A. sinica sp. nov. It is distinguished from its most closely related congener A. annulata (Kahl, 1928) Borror, 1972 by having numerous ring-shaped structures with a shallow brim more or less densely centralised at both ends of the body. Brief notes on the cell division and phylogenetic analyses based on small subunit (SSU) rRNA gene sequence for both organisms are also supplied in order to get further understanding of their systematic positions. The molecular information indicates that both organisms belong to two separate clades and confirms that the genus Amphisiella might be polyphyletic. PMID:27156119

  6. Symbiotic Chlorella variabilis incubated under constant dark conditions for 24 hours loses the ability to avoid digestion by host lysosomal enzymes in digestive vacuoles of host ciliate Paramecium bursaria.

    Science.gov (United States)

    Kodama, Yuuki; Fujishima, Masahiro

    2014-12-01

    Endosymbiosis between symbiotic Chlorella and alga-free Paramecium bursaria cells can be induced by mixing them. To establish the endosymbiosis, algae must acquire temporary resistance to the host lysosomal enzymes in the digestive vacuoles (DVs). When symbiotic algae isolated from the alga-bearing paramecia are kept under a constant dark conditions for 24 h before mixing with the alga-free paramecia, almost all algae are digested in the host DVs. To examine the cause of algal acquisition to the host lysosomal enzymes, the isolated algae were kept under a constant light conditions with or without a photosynthesis inhibitor 3-(3,4-dichlorophenyl)-1,1-dimethylurea for 24 h, and were mixed with alga-free paramecia. Unexpectedly, most of the algae were not digested in the DVs irrespective of the presence of the inhibitor. Addition of 1 mM maltose, a main photosynthetic product of the symbiotic algae or of a supernatant of the isolated algae kept for 24 h under a constant light conditions, did not rescue the algal digestion in the DVs. These observations reveal that unknown factors induced by light are a prerequisite for algal resistance to the host lysosomal enzymes.

  7. Influence of Corythucha ciliate hazards on photosynthesis of two types of Platanus acerifolia%方翅网蝽对两种类型悬铃木光合作用的影响

    Institute of Scientific and Technical Information of China (English)

    赵德斌; 刘桂华; 唐燕平; 杨春材; 张栋

    2011-01-01

    于2010年4-8月通过对两种不同类型悬铃木的叶片净光合速率、叶绿素含量和方翅网蝽危害程度进行了测定,并运用多元逐步回归和通径分析方法分析了光合作用与环境因子之间的相互关系.结果表明,虫口密度与叶绿素含量呈负相关关系,且不同类型悬铃木间叶绿素含量差异显著;方翅网蝽危害使叶绿素含量减少是影响光合作用的最直接和最重要的原因.生长季节各月所选典型天气下的Pn大小顺序表现为7月>8月>6月>5月>4月;其中4、5月悬铃木净光合速率(Pn)日变化呈现"单峰"曲线,经分析发现大气温度、光合有效辐射、气孔导度是影响Pn变化的主要因子;6-8月Pn日变化呈现"双峰"曲线,环境因子大气水汽压差、相对湿度和胞间CO2浓度成为主要影响因子.由此可见,悬铃木生长季节光合作用存在较大差异,同时各环境因子对光合作用的影响及影响程度也各不相同.%From April to August in 2010, the diurnal and seasonal dynamics of the net photosynthesis rate, the chlorophyll content and the degree of Corythucha ciliata hazards in two types of Platanus acerifolia were determined and the relationships between the dynamics and environmental factors were analyzed by the stepwise multiple regression and the path analysis. The results showed there was a negative relationship between the insect density and the chlorophyll content and the chlorophyll content was remarkably different between the two types of P. acerifolia. The reluction of chlorophyll content in the leaves resulted from C. ciliata hazards was the most directly and the most important reason for affecting the photosynthesis. The daily mean net photosynthesis rate (Pn) for each month was in the order of July > August > June > May > April.The diurnal change of Pn was a "one peak" curve in April and in May respectively, while it was a "two peaks" pattern in June to August. The dynamics of Pn was very sensitive to the air temperature, photosynthetic active radiation and stomatal conductance in April and May,and to vapor pressure deficit, relative humidity and Ci in June, July and August. It was suggested that there existed greater differences in the diurnal and seasonal dynamics of Pn in the growth period of Platanus acerifolia, and the effects of the environmental factors on Pn were different.

  8. 青岛沿岸水体原生生物群落与水质状况的关系%The relationship between protistan community and water quality along the coast of Qingdao

    Institute of Scientific and Technical Information of China (English)

    杨金鹏; 姜勇; 胡晓钟

    2012-01-01

    feasibility of using the PFU method to assess coastal water quality, Xu et al. Modified the conventional PFU method and presented a bottled PFU ( BPFU) system and successfully used to evaluate the water quality in Korean coastal waters. Our study is the first to use the BPFU method for bioassessment in Chinese offshore areas. Three stations in the coastal waters off Qingdao, China were selected as study area from September to October in 2007. Margalef diversity index was calculated by d = ( 5-1) /ln/V. The relationship between the protistan community parameters and marine water qualitywas analyzed. MacArthur and Wilson equilibrium model; S,=S (1-e ') was applied to assess the colonizing process of protistan communities. A total of 263 species of protists were identified during the survey. Among these were 83 diatoms, 59 flagellates, 31 sarcodines, and 90 ciliates. In terms of species composition, site 1 was dominated mainly by bacterivores (e.g. , Euplotes parabalteatus, Uronema marinum and Pleuronema coronation) , site 3 mainly by algivores ( e. G. , Strombidinopsis minima, Strombidium apolatum and Hartmannula augustipilom) , and site 2 was in an intermediate status. These results are consistent with the environmental conditions: site 3 had the best water quality, site 1 was the most eutrophic site, and site 2 was the moderate one. Furthermore, the colonization processes and functional parameters (I. E. Seq, G and T90^% ) of communities correlated with the pollution status and could thus clearly discriminate the different classes of water quality as measured by physicochemical indicators. But the Margalef diversity index did not coincide with the water conditions; site 1 had the highest index value (on average 4. 16) , while site 2 had the lowest (on average 3.00). Nonetheless, this work further suggests the practicability of the BPFU method for biomonitoring of coastal water pollution. Our study also indicates that protistan communities are more effective and accurate than

  9. Role of secondary metabolites of wild marigold in suppression of Johnson grass and Sun spurge

    Institute of Scientific and Technical Information of China (English)

    Sehrish; Sadia; Rahmatullah; Qureshi; Shahida; Khalid; Brian; Gagosh; Nayyar; Jin-tun; Zhang

    2015-01-01

    Objective: To analyze the wild marigold [(Tagetes minuta L.)(T. minuta)] leaf extract with respect to phytochemicals and allelopathic activity. Methods: The aqueous extracts of T. minuta leaves at concentrations of 50%, 75% and 100% were prepared. Preliminary phytochemical analysis was carried out and then allelopathic ef ect of T. minuta on root length, shoot length, germination, fresh and dry weight of Johnson grass and Sun spurge was tested on i lter paper and in soil.Results: Qualitative phytochemical analysis showed the presence of alkaloids, tannins, saponins, l avonoides and terpenoids. The higher concentrations proved to be signii cantly ef ective in reducing almost all the parameters of Sun spurge and Johnson grass in i lter paper bioassay. Supplemented with the soil, all concentrations of leaf extract showed reduction in germination, root and shoot growth, fresh and dry weight of Sun spurge; however, 100% concentration signii cantly reduced the germination of Johnson grass. Conclusions: This study suggests that marigold allelochemicals can be used as an integrated weed management for the production of better crop yield.

  10. New xenophytes from Gran Canaria (Canary Islands, Spain), with emphasis on naturalized and (potentially) invasive species

    OpenAIRE

    Verloove, F

    2013-01-01

    Trabajos recientes de campo en Gran Canaria han facilitado el descubrimiento de nuevas localidades para plantas vasculares no nativas. Agave attenuata, Antigonon leptopus, Atriplex nummularia, Cascabela thevetia, Cenchrus echinatus, Cuscuta campestris, Diplachne fusca subsp. uninervia, Diplotaxis tenuifolia, Dysphania anthelmintica (hasta ahora confundida con D. ambrosioides), Eclipta prostrata, Euphorbia pulcherrima, Fagopyrum esculentum, Gossypium barbadense, Lablab purpureus, Lemna minuta,...

  11. Callus and cell culture of Tagetes species in relation to production of thiophenes.

    NARCIS (Netherlands)

    Ketel, D.H.

    1987-01-01

    The production of thiophene-biocides by cell cultures invitro was simultaneously investigated with Tageteserecta , T.patula and T.minuta . The calli from which the liquid cultures had to be derived differed between species in the appearance of

  12. Partial revision of Scolelepis (Polychaeta: Spionidae) from the Grand Caribbean Region, with the description of two new species and a key to species recorded in the area

    NARCIS (Netherlands)

    Delgado Blas, V.H.

    2006-01-01

    Five Scolelepis species from the Gulf of Mexico and Western Atlantic Ocean are reported and certain species previously synonymized with Scolelepis (S.) squamata are revised. Four species are reinstated: S. (S.) goodbodyi (Jones, 1962), S. (S.) minuta (Treadwell, 1939), S. (S.) acuta (Treadwell, 1914

  13. Identification of a Pi9 containing rice germplasm with a newly developed robust marker

    Science.gov (United States)

    The Pi9 gene, originating from Oryza minuta, is an effective resistance gene for controlling rice blast disease (Magnaporthe oryzae). However, currently available linked DNA markers do not accurately identify the function of Pi9, thus hindering its efficient incorporation into new cultivars through...

  14. A new species of Netomocera Bouček (Hymenoptera: Chalcidoidea: Pteromalidae from the southern Western Ghats, Karnataka, with a key to world species

    Directory of Open Access Journals (Sweden)

    P.M. Sureshan

    2015-02-01

    Full Text Available A new species of Netomocera Bouček (Hymenoptera: Pteromalidae N. minuta sp. nov. is described from the southern Western Ghats of Karnataka, India. Affinities of the new species with related species are discussed and a key to the world species of Netomocera is provided.

  15. GenBank blastn search result: AK059600 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK059600 001-030-E05 AY188628.1 Oryza minuta clone 15 internal transcribed spacer 1..., partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.|PLN PLN 2e-80 Plus Plus ...

  16. GenBank blastn search result: AK107169 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK107169 002-124-F12 AY188624.1 Oryza minuta clone 11 internal transcribed spacer 1..., partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.|PLN PLN 3e-85 Plus Plus ...

  17. GenBank blastn search result: AK059600 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK059600 001-030-E05 AY188617.1 Oryza minuta clone 4 internal transcribed spacer 1,... partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.|PLN PLN 3e-85 Plus Plus ...

  18. GenBank blastn search result: AK059600 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK059600 001-030-E05 AY188631.1 Oryza minuta clone 18 internal transcribed spacer 1..., partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.|PLN PLN 3e-85 Plus Plus ...

  19. GenBank blastn search result: AK107169 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK107169 002-124-F12 AY188630.1 Oryza minuta clone 17 internal transcribed spacer 1..., partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.|PLN PLN 3e-85 Plus Plus ...

  20. GenBank blastn search result: AK059600 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK059600 001-030-E05 AY188622.1 Oryza minuta clone 9 internal transcribed spacer 1,... partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.|PLN PLN 3e-85 Plus Plus ...

  1. GenBank blastn search result: AK059600 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK059600 001-030-E05 AY188610.1 Oryza minuta clone 5 internal transcribed spacer 1,... partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.|PLN PLN 3e-85 Plus Plus ...

  2. GenBank blastn search result: AK107169 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK107169 002-124-F12 AY188609.1 Oryza minuta clone 4 internal transcribed spacer 1,... partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.|PLN PLN 3e-85 Plus Plus ...

  3. GenBank blastn search result: AK059600 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK059600 001-030-E05 AY188620.1 Oryza minuta clone 7 internal transcribed spacer 1,... partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.|PLN PLN 7e-86 Plus Plus ...

  4. A new species of Labania Hedqvist (Braconidae, Doryctinae from Costa Rica, reared from aerial root galls of Ficus obtusifolia Kunth

    Directory of Open Access Journals (Sweden)

    Sergey Belokobylskij

    2015-06-01

    Full Text Available A new species of the Doryctinae genus Labania Hedqvist, L. ficophaga sp. n. from Costa Rica is described. This new species was reared from aerial root galls of Ficus obtusifolia Kunth. An updated key to the five described species of Labania and digital pictures of L. ficophaga sp. n. and L. minuta Marsh are provided.

  5. Contribution to the knowledge of Neoperla (Plecoptera: Perlidae) from Hainan Province of China.

    Science.gov (United States)

    Chen, Zhi-Teng; Du, Yu-Zhou

    2016-01-01

    The species of the perlid genus Neoperla are reviewed from Hainan Province, China. Three species of Neoperla, N. minuta sp. nov., N. wuzhishana sp. nov., and N. sexlobata sp. nov. are described from this island province and compared with other taxa. A provisional key is presented to the known Neoperla males from Hainan Province. PMID:27470851

  6. Ultrastructural features of the uterus in the sexually immature ostrich (Struthio camelus during periods of ovarian inactivity and activity

    Directory of Open Access Journals (Sweden)

    M-C. Madekurozwa

    2007-09-01

    Full Text Available The ultrastructure of the surface epithelium and tubular glands of the uterus in the immature ostrich is described. In ostriches with inactive ovaries the uterus is lined by a non-ciliated simple columnar epithelium, with basally located heterochromatic nuclei. Scanning electron microscopy revealed that these non-ciliated cells have a dense microvillous cover. A simple columnar to pseudostratified columnar epithelium, comprised of non-ciliated and ciliated cells, lines the uterus in birds with active ovaries. The ciliated cells possess a wide luminal region, which contains a nucleus and various organelles. An accumulation of secretory granules was observed in the apical regions of the non-ciliated cells, as well as in a few ciliated cells. In addition to non-ciliated and ciliated cells, a cell type with rarefied cytoplasm was also identified. These cells appear to correspond to calcium secreting cells identified in other avian species. The results of this study indicate that, although uterine differentiation is present in immature ostriches with active ovaries, the production of secretory product appears to occur mainly in non-ciliated epithelial cells.

  7. Biological and chemical data determined in mesocosm experiments by Dauphin Island Sea Lab in June and August of 2011 (NODC Accession 0118680)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Abundances of viruses, prokaryotes, diatoms, dinoflagellates, ciliates and heterotrophic nanoflagellates were determined over time in mesocosm experiments measuring...

  8. The Hornless Australian Burrowing Mayfly Ulmerophlebia (Ephemeroptera: Leptophlebiidae

    Directory of Open Access Journals (Sweden)

    Yeon Jae Bae

    2012-10-01

    Full Text Available The hornless Australian burrowing mayfly genus Ulmerophlebia Demoulin (Leptophlebiidae is revised based on comprehensive examinations of adult and larval material collected throughout Australia. Two new species [Ulmerophlebia deani n. sp. and U. minuta n. sp.] and three named species [U. annulata (Harker, U. mjobergi (Ulmer and U. pipinna Suter] are included. The larva of U. deani can be distinguished by the moderately developed apicomedial expansion of gills and W-shaped markings on the abdominal terga. The male adult of U. minuta can be easily distinguished by the greatly reduced penes. Descriptions, diagnoses, line-drawings of key characters, material and distributional data, taxonomic remarks and adult and larval keys are provided.

  9. Repellent Activities of Essential Oils of Some Plants Used Traditionally to Control the Brown Ear Tick, Rhipicephalus appendiculatus

    Directory of Open Access Journals (Sweden)

    Wycliffe Wanzala

    2014-01-01

    Full Text Available Essential oils of eight plants, selected after an ethnobotanical survey conducted in Bukusu community in Bungoma County, western Kenya (Tagetes minuta, Tithonia diversifolia, Juniperus procera, Solanecio mannii, Senna didymobotrya, Lantana camara, Securidaca longepedunculata, and Hoslundia opposita, were initially screened (at two doses for their repellence against brown ear tick, Rhipicephalus appendiculatus, using a dual-choice climbing assay. The oils of T. minuta and T. diversifolia were then selected for more detailed study. Dose-response evaluations of these oils showed that T. minuta oil was more repellent (RD50 = 0.0021 mg than that of T. diversifolia (RD50 = 0.263 mg. Gas chromatography-linked mass spectrometric (GC-MS analyses showed different compositions of the two oils. T. minuta oil is comprised mainly of cis-ocimene (43.78%, dihydrotagetone (16.71%, piperitenone (10.15%, trans-tagetone (8.67%, 3,9-epoxy-p-mentha-1,8(10diene (6.47%, β-ocimene (3.25%, and cis-tagetone (1.95%, whereas T. diversifolia oil is comprised mainly of α-pinene (63.64%, β-pinene (15.00%, isocaryophyllene (7.62%, nerolidol (3.70%, 1-tridecanol (1.75%, limonene (1.52%, and sabinene (1.00%. The results provide scientific rationale for traditional use of raw products of these plants in controlling livestock ticks by the Bukusu community and lay down some groundwork for exploiting partially refined products such as essential oils of these plants in protecting cattle against infestations with R. appendiculatus.

  10. Quirópteros do Parque Estadual da Pedra Branca, Rio de Janeiro, Brasil (Mammalia, Chiroptera) Bats from Pedra Branca State Park, Rio de Janeiro, Brazil (Mammalia, Chiroptera)

    OpenAIRE

    Daniela Dias; Adriano Lúcio Peracchi; Shirley Seixas Pereira da Silva

    2002-01-01

    A survey of chiropteran fauna was conducted during the period from March 1994 to May 1998 in Pedra Branca State Park, Rio de Janeiro, Rio de Janeiro State. A total of 681 specimens of 24 species were recorded: Chrotopterus auritus (Peters, 1856); Micronycteris megalotis (Gray, 1842); Micronycteris minuta (Gervais, 1856); Mimmon bennettii (Gray, 1838); Phyllostomus hastatus (Pallas, 1767); Tonatia bidens (Von Spix, 1823); Lonchophylla bokermanni Sazima, Vizotto & Taddei, 1978; Lonchophylla mor...

  11. A comparative study on mesozooplankton abundance and diversity between a protected and an unprotected coastal area of Andaman Islands.

    Digital Repository Service at National Institute of Oceanography (India)

    Pillai, H.U.K.; Jayalakshmy, K.V.; Biju, A.; Jayalakshmi, K.J.; Paulinose, V.T.; Devi, C.B.L.; Nair, V.R.; Revichandran, C.; Menon, N.R.; Achuthankutty, C.T.; Panampunnayil, S.U.

    1), Malay island (station 2), Jolly Buoy Island (station 3), Inter-Island (station 4) and Red Skin Island (station 5). 2.2. Sampling procedure and data analysis A boat was used for sample collection. Sampling was carried out during three seasons... vulgaris was observed, particularly at Red skin station of MPA during NEM. Dominance of Acartia erythraea, A. spinicauda, Labidocera pavo and L. minuta, was observed only during IM season and the presence of species like Lucicutia flavicornis, Pontella...

  12. Differentiation of females in Sergentomyia sensu stricto (Diptera: Psychodidae) using scanning electron microscopy of pharyngeal armatures.

    Science.gov (United States)

    Benabdennbi, I; Bombard, S; Braverman, Y; Pesson, B

    1996-03-01

    Scanning electron microscopy of external ornamentation and internal armature of the pharynx was used to identify females of Sergentomyia sensu stricto. Five species from the eastern Mediterranean basin were compared; S. minuta clearly was separated from species of the fallax-group. Within the fallax-group, S. fallax was distinguished readily by its heart-shaped pharynx and the difference in armature between the dorsal and lateral plates.

  13. Antifungal steroidal glycosides from the patagonian starfish anasteriasminuta: structure-activity correlations.

    Science.gov (United States)

    Chludil, Hugo D; Seldes, Alicia M; Maier, Marta S

    2002-02-01

    Two new sulfated steroidal hexaglycosides, anasterosides A (2) and B (3), along with the known versicoside A (1) have been isolated from the Patagonian starfish Anasterias minuta. Their structures have been elucidated by spectroscopic analysis (NMR and FABMS) and chemical transformations. Compounds 1 and 2 and the synthetic pentaglycoside 1b derived from versicoside A showed antifungal activity against the plant pathogenic fungus Cladosporium cucumerinum. Desulfation of hexaglycoside 1 rendered a totally inactive saponin. PMID:11858747

  14. Repellent Activities of Essential Oils of Some Plants Used Traditionally to Control the Brown Ear Tick, Rhipicephalus appendiculatus.

    Science.gov (United States)

    Wanzala, Wycliffe; Hassanali, Ahmed; Mukabana, Wolfgang Richard; Takken, Willem

    2014-01-01

    Essential oils of eight plants, selected after an ethnobotanical survey conducted in Bukusu community in Bungoma County, western Kenya (Tagetes minuta, Tithonia diversifolia, Juniperus procera, Solanecio mannii, Senna didymobotrya, Lantana camara, Securidaca longepedunculata, and Hoslundia opposita), were initially screened (at two doses) for their repellence against brown ear tick, Rhipicephalus appendiculatus, using a dual-choice climbing assay. The oils of T. minuta and T. diversifolia were then selected for more detailed study. Dose-response evaluations of these oils showed that T. minuta oil was more repellent (RD50 = 0.0021 mg) than that of T. diversifolia (RD50 = 0.263 mg). Gas chromatography-linked mass spectrometric (GC-MS) analyses showed different compositions of the two oils. T. minuta oil is comprised mainly of cis-ocimene (43.78%), dihydrotagetone (16.71%), piperitenone (10.15%), trans-tagetone (8.67%), 3,9-epoxy-p-mentha-1,8(10)diene (6.47%), β -ocimene (3.25%), and cis-tagetone (1.95%), whereas T. diversifolia oil is comprised mainly of α -pinene (63.64%), β -pinene (15.00%), isocaryophyllene (7.62%), nerolidol (3.70%), 1-tridecanol (1.75%), limonene (1.52%), and sabinene (1.00%). The results provide scientific rationale for traditional use of raw products of these plants in controlling livestock ticks by the Bukusu community and lay down some groundwork for exploiting partially refined products such as essential oils of these plants in protecting cattle against infestations with R. appendiculatus. PMID:24693417

  15. Two species of Acuaria Bremser, 1811 (Nematoda: Acuarioidea: Acuariidae) in passerine birds from the Area de Conservacion Guanacaste, Costa Rica.

    Science.gov (United States)

    Zhang, Luping; Brooks, Daniel R; Causey, Douglas

    2003-10-01

    Two species of Acuaria were collected from passerine birds from the Area de Conservacion Guanacaste, Costa Rica. Acuaria mayori Lent, Freitas and Proenca, 1945, was collected from Myiarchus nuttingi. Specimens from Costa Rica differ from the original description by having a spicule ratio of 1:1.5-1.7 versus 1:1.43-1.47, as well as shorter spicules and female tails. Acuaria wangi n. sp. in Hylophylax naevioides and Gymnopithys leucaspis resembles A. alii, A. crami, A. cyanocitta, A. minuta, A. pattoni, and A. cissae by having cordons extending posteriorly to the anterior portion of the glandular esophagus. The new species differs from A. alii by having 4 pairs of preanal and 6 pairs of postanal papillae rather than 2 pairs of preanal and 7 pairs of postanal papillae, a shorter left spicule, a spicule ratio of 1:1.6-1.8 versus 1:1.1 and in having spicules with blunt rather than pointed distal ends. Acuaria crami and A. minuta differ from A. wangi by having 7 pairs of postanal papillae and spicule ratios of 1:1.6-1.8 versus 1:1.3 in A. crami and 1:1.1 in A. minuta; in addition, A. minuta has spatulate-shaped spicules and a tricupsid-shaped distal end of the right spicule. The new species can be distinguished from A. pattoni by having a longer left spicule and a spicule ratio of 1:1.6-1.8 versus 1:1 and from A. cissae by having a shorter left spicule and a spicule ratio of 1:1.6-1.8 versus 1:2.5-2.7. Acuaria wangi is similar to A. cyanocitta, which has similarly shaped spicules, including a very pointed distal end of the left spicule, but differs in body length, in having shorter spicules, in the arrangement of postanal papillae, and in having smaller eggs.

  16. ANTIBACTERIAL ACTIVITY KINETICS OF MEDICINAL PLANTS EXTRACTS AGAINST CINÉTICA DA ATIVIDADE ANTIBACTERIANA IN VITRO DE EXTRATOS NATURAIS FRENTE A MICRORGANISMOS RELACIONADOS À MASTITE BOVINA

    OpenAIRE

    Letícia De Toni; Luciana Souza Prestes; Helen Silveira Coimbra; José Maria Wiest; Luiz Filipe Dame Schuch; Juliana dos Santos Lemos

    2008-01-01

    The subject of this paper is to test antimicrobials activities by medicinal plants extracts against more important contagious bovine mastitis pathogens. Disinfectants solutions was made from Baccharis trimera (Less) D.C., Compositae (Asteracea), Eucalyptus spp Labill., Myrtaceae e Tagetes minuta (Linn.), Compositae (Asteracea) plants by hidroalcoholic extraction (EHA) or decoction (DEC). S. aureus, S. agalactiae, and P. aeruginosa were used. To test for in vitro efficacy, each solution disinf...

  17. Spatial distribution of mollusks in the intertidal zone of sheltered beaches in southeastern of Brazil

    Directory of Open Access Journals (Sweden)

    Eliane P. de Arruda

    2003-06-01

    Full Text Available The spatial distribution of mollusks in the intertidal zone was examined monthly from August 1995 through July 1997, in Enseada, Barra Velha and Araçá beaches in southeastern of Brazil. One study sector was selected in Enseada and Barra Velha, and two sectors in Araçá (Araçá I and Araçá II. The sectors were 10 m wide and equivalent in length to the width of the intertidal zone. Each sector was divided into three horizontal levels: lower, middle and upper, where the samples were taken with a cylinder corer with a base area of 0.16 m². In order to characterize the intertidal environment in these areas, some environmental variables were analyzed. In general, the mollusks were distributed in the sectors as follows: Enseada - Olivella minuta (Link, 1807 in the lower level and Tagelus plebeius (Lightfoot, 1786 in the upper level; Araçá I - O. minuta in the lower level, Tellina lineata Turton, 1819 and Anomalocardia brasiliana (Gmelin, 1791 in the middle levels; Araçá II - Cerithium atratum (Born, 1778 in the lower level, O. minuta in the lower and middle levels, and A. brasiliana and Corbula caribaea Orbigny, 1842 in the middle level; Barra Velha - Tagelus divisus (Spengler, 1794, Lucina pectinata (Gmelin, 1791 and Tellina versicolor De Kay, 1843 in the lower level, and A. brasiliana and Macoma constricta (Brugüìere, 1792 in the upper level. The intertidal zone of the study sectors could be divided into two biological zones: the upper zone, where T. plebeius, A. brasiliana and M. constricta were more abundant; and the lower zone, where O. minuta, C. atratum, T. lineata, T. versicolor, C. caribaea, T. divisus and L. pectinata were abundant.

  18. Prilog neofitskoj flori područja rijeke Cetine (Dalmacija, Hrvatska)

    OpenAIRE

    Pandža, Marija; Tafra, Damira

    2008-01-01

    U radu se navode nalazišta 22 neofita uz rijeku Cetinu. Neofiti – Acer negundo L., Amaranthus albus L., A. blitoides S. Watson, Ambrosia artemisiifolia L., Artemisia verlotiorum Lamotte, Conyza bonariensis (L.) Cronq., C. canadensis (L.) Cronq., Eleusine indica (L.) Gaertner, Euphorbia maculata L., E. prostrata Aiton, Galinsoga parviflora Cav., Paspalum paspalodes (Michx.) Scribn., Tagetes minuta L., Xanthium spinosum L., X. strumarium L. subsp. italicum (Moretti) D. Löve prvi put se navode z...

  19. Host Status of Seven Weed Species and Their Effects on Ditylenchus destructor Infestation of Peanut

    OpenAIRE

    De Waele, D.; Jordaan, Elizabeth M.; Basson, Selmaré

    1990-01-01

    The host suitability to Ditylenchus destructor of seven common weed species in peanut (Arachis hypogaea) fields in South Africa was determined. Based on the number of nematodes per root unit, white goosefoot (Chenopodium album), feathertop chloris (Chloris virgata), purple nutsedge (Cyperus rotundus), jimson weed (Datura stramonium), goose grass (Eleusine indica), khaki weed (Tagetes minuta), and cocklebur (Xanthium strumarium) were poor hosts. Ditylenchus destructor survived on all weed spec...

  20. Experimental infections of Orchitophrya stellarum (Scuticociliata) in American blue crabs (Callinectes sapidus) and fiddler crabs (Uca minax).

    Science.gov (United States)

    Miller, Terrence L; Small, Hamish J; Peemoeller, Bhae-Jin; Gibbs, David A; Shields, Jeffrey D

    2013-11-01

    Outbreaks of an unidentified ciliate have occurred on several occasions in blue crabs from Chesapeake Bay held during winter months in flow-through systems. The parasite was initially thought to be Mesanophrys chesapeakensis, but molecular analysis identified it as Orchitophyra stellarum, a facultative parasite of sea stars (Asteroidea). We investigated the host-parasite association of O. stellarum in the blue crab host. Crabs were inoculated with the ciliate, or they were held in bath exposures after experimentally induced autotomy of limbs in order to determine potential mechanisms for infection. Crabs inoculated with the ciliate, or exposed to it after experimental autotomy, rapidly developed fatal infections. Crabs that were not experimentally injured, but were exposed to the ciliate, rarely developed infections; thus, indicating that the parasite requires a wound or break in the cuticle as a portal of entry. For comparative purposes, fiddler crabs, Uca minax, were inoculated with the ciliate in a dose-titration experiment. Low doses of the ciliate (10 per crab) were sometimes able to establish infections, but high intensity infections developed quickly at doses over 500 ciliates per crab. Chemotaxis studies were initiated to determine if the ciliate preferentially selected blue crab serum (BCS) over other nutrient sources. Cultures grown on medium with BCS or fetal bovine serum showed some conditioning in their selection for different media, but the outcome in choice experiments indicated that the ciliate was attracted to BCS and not seawater. Our findings indicate that O. stellarum is a facultative parasite of blue crabs. It can cause infections in exposed crabs at 10-15°C, but it requires a portal of entry for successful host invasion, and it may find injured hosts using chemotaxis.

  1. Growth and grazing on the 'Texas brown tide' alga Aureoumbra lagunensis by the tintinnid Amphorides quadrilineata

    DEFF Research Database (Denmark)

    Jakobsen, Hans Henrik; Hyatt, C.; Buskey, E.J.

    2001-01-01

    Growth and ingestion by the loricate ciliate Amphorides quadrilineata exposed to increasing dietary doses of the Texas brown tide alga Aureoumbra lagunensis were investigated. The ciliate grew at a maximum rate of 0.38 d(-1), ingesting 0.032 ppm (similar to6.4 x 10(2) cells) prey d(-1) on a diet....... lagunensis by increasing the turning rate per unit time. This study suggests that efficient top-down control of A. lagunensis by heterotrophic protozoans such as the studied ciliate may not happen as long as phytoplankton organisms other than A. lagunensis make up a minor part of the standing phytoplankton...

  2. Intersite epibiosis characterization on dominant mangrove crustacean species from Malaysia

    NARCIS (Netherlands)

    Fernandez-Leborans, G.; Hanamura, Y.; Siow, R.; Chee, P.-E.

    2009-01-01

    Epibiosis was studied in dominant mangrove crustacean species in several areas in Malaysia. The observed basibionts were the crustaceans Mesopodopsis orientalis, Acetes japonicus, Acetes sibogae, Acetes indicus and Fenneropenaeus merguiensis and the epibionts found were the protozoan ciliates Acinet

  3. Ultrastructural studies of the transitional zone in the nasopharyngeal epithelium, with special reference to the keratinizing process in the mouse.

    Science.gov (United States)

    Nakano, T

    1986-01-01

    In the nasopharynx of the SMA mouse, the 'intermediate epithelium' occupies the transitional zone between the ciliated columnar and the stratified squamous epithelia. The intermediate epithelium showed gradations ranging from ciliated stratified low-columnar through stratified cuboidal to stratified squamous type. It is suggested that the intermediate epithelium shows the various stages of the epithelium transforming from the ciliated columnar to the stratified squamous epithelium, and that the basal cells of the ciliated columnar epithelium serve as the germinal layer for the transformation. The intermediate epithelium containing a few keratohyalin granules and many membrane-coating granules represented earlier stages of keratinization. The width of the microprojections in the stratified squamous epithelium was about doubled compared to that in the intermediate epithelium. It is suggested that the difference in width is caused by cell membrane distortion associated with keratinization and is regarded as an important marker of the start of keratinization.

  4. Studies on the associates and parasites of zooplankton from southwest and southeast coasts of India

    Digital Repository Service at National Institute of Oceanography (India)

    Santhakumari, V.

    Associates and parasites of zooplankton from southwest and southeast coasts of India were studied. Among the epizoic forms two species of ciliates infesting copepods were new records from Indian waters. Eight species of suctorians were found epizoic...

  5. Hydrographic and productivity characteristics along 45 degrees E longitude in the southwestern Indian Ocean and Southern Ocean during austral summer 2004

    Digital Repository Service at National Institute of Oceanography (India)

    Jasmine, P.; Muraleedharan, K.R.; Madhu, N.V.; AshaDevi, C.R.; Alagarsamy, R.; Achuthankutty, C.T.; Jayan, Z.; Sanjeevan, V.N.; Sahayak, S.

    loop within STZ, STFZ and SAZ and the multivorous food web ecology within the PFZ. Dominance of ciliates in the microzooplankton community may be one factor resulting in the maintenance of a high mesozooplankton standing stock in SAZ. In contrast...

  6. Seasonal variations and trophic ecology of microzooplankton in the southeastern Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    AshaDevi, C.R.; Jyothibabu, R.; Sabu, P.; Jacob, J.; Habeebrehman, H.; Prabhakaran, M.P.; Jayalakshmi, K.J.; Achuthankutty, C.T.

    and cyanobacteria, the most preferred food of ciliates. On the other hand, the dominance of heterotrophic dinoflagellates during the monsoon periods could be linked to their ability to graze larger diatoms which were abundant during the monsoon periods. The overall...

  7. Studies on the microzooplankton from the central and eastern Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Gauns, M.; Mohanraju, R.; Madhupratap, M.

    Numerical abundance and composition of microzooplankton in the upper 200 m were studied from the central and eastern Arabian Sea during three seasons. Protozoans, comprising of ciliates (loricates and aloricates), flagellates and sarcodines were...

  8. Non-invasive sources of cells with primary cilia from pediatric and adult patients

    NARCIS (Netherlands)

    Ajzenberg, H.; Slaats, G.G.; Stokman, M.F.; Arts, H.H.; Logister, I.; Kroes, H.Y.; Renkema, K.Y.; Haelst, M.M. van; Terhal, P.A.; Rooij, I.A.L.M. van; Keijzer-Veen, M.G.; Knoers, N.V.; Lilien, M.R.; Jewett, M.A.; Giles, R.H.

    2015-01-01

    BACKGROUND: Ciliopathies give rise to a multitude of organ-specific pathologies; obtaining relevant primary patient material is useful for both diagnostics and research. However, acquisition of primary ciliated cells from patients, particularly pediatric patients, presents multiple difficulties. Bio

  9. An anaerobic mitochondrion that produces hydrogen

    NARCIS (Netherlands)

    Boxma, Brigitte; Graaf, Rob M. de; Staay, Georg W.M. van der; Alen, Theo A. van; Ricard, Guenola; Gabaldón, Toni; Hoek, Angela H.A.M. van; Moon-van der Staay, Seung Yeo; Koopman, Werner J.H.; Hellemond, Jaap J. van; Tielens, Aloysius G.M.; Friedrich, Thorsten; Veenhuis, Marten; Huynen, Martijn A.; Hackstein, Johannes H.P.

    2005-01-01

    Hydrogenosomes are organelles that produce ATP and hydrogen, and are found in various unrelated eukaryotes, such as anaerobic flagellates, chytridiomycete fungi and ciliates. Although all of these organelles generate hydrogen, the hydrogenosomes from these organisms are structurally and metabolicall

  10. Estudios histológico e histoquímico del sistema digestivo de la almeja catarina Argopecten ventricosus (Sowerby, 1842)

    OpenAIRE

    Cáceres, C.; Alarcón, F.J.

    2002-01-01

    Histological and histochemical studies on the digestive system of Argopecten ventricosus (Sowerby, 1842) was carried out. Lips show a ciliated columnar epithelium with glycoproteins and acid and alkaline phosphatases, and α-D glucosidase activity. Esophagus and lips epitheliums are similar. Acid and alkaline phosphatases, α-D glucosidase and leucil aminopeptidase activities were detected. The epithelium of the stomach is ciliated and contains glands which secrete glycoproteins. Acid and alkal...

  11. The luminal surface of thyroid cysts in SEM

    DEFF Research Database (Denmark)

    Zelander, T; Kirkeby, S

    1978-01-01

    Four of the five kinds of cells constituting the walls of thyroid cysts can be identified in the SEM. These are cuboidal cells, mucous cells, cells with large granules and ciliated cells. A correlation between SEM and TEM observations is attempted.......Four of the five kinds of cells constituting the walls of thyroid cysts can be identified in the SEM. These are cuboidal cells, mucous cells, cells with large granules and ciliated cells. A correlation between SEM and TEM observations is attempted....

  12. alpha-Tubulin of Histriculus cavicola (Ciliophora; Hypotrichea).

    Science.gov (United States)

    Pérez-Romero, P; Villalobo, E; Díaz-Ramos, C; Calvo, P; Santos-Rosa, F; Torres, A

    1997-03-01

    An alpha-tubulin gene fragment amplified by PCR from the hypotrichous ciliate Histriculus cavicola has been sequenced. This fragment, 1,182 bp long, contains an in-frame "stop" codon (UAA), which in other hypotrichous species codes for a glutamine residue. The comparison of the alpha-tubulin genes from several ciliates classes have revealed amino acid positions which could serve to distinguish these taxonomic groups.

  13. Tolerance of sewage treatment plant microorganisms to mosquitocides.

    Science.gov (United States)

    Tietze, N S; Olson, M A; Hester, P G; Moore, J J

    1993-12-01

    Beneficial protozoa and rotifers collected from a wastewater treatment plant in Panama City, FL, were tested for tolerance to 11 commonly used mosquito larvicides and adulticides in the laboratory. The acute effects were assessed using selected concentrations of the adulticides fenthion, malathion, naled, permethrin, and resmethrin; and the larvicides Bacillus thuringiensis israelensis, Bacillus sphaericus, diflubenzuron, larviciding oil, methoprene, and temephos for the following microorganism taxa: ameoboids, flagellates, free-swimming ciliates, stalked ciliates, and rotifers. PMID:8126488

  14. Influence of palm fatty acid distillate on rumen degradability and protozoa population in buffaloes

    Directory of Open Access Journals (Sweden)

    Weber Vilas Boas Soares

    2010-11-01

    Full Text Available Oil and fat as energy sources at low cost are relevant in ruminant nutrition. The aim of this study was to evaluate the effects of palm fatty acid distillate (PFAD on the degradability and ciliate protozoa population in buffalo. Four rumen fistulated buffaloes were fed a basal diet in a Latin square (4x4 design trial. Treatments were designed with four of different levels of PFAD added directly into the rumen: 0; 200; 420 and 500 g/animal/d. High levels of PFAD (420 and 500 g/d promoted higher degradation of the soluble fraction and lower in potentially degradable fraction of dry matter (DM and neutral detergent fibre (NDF with lower values of potential and effective degradability in two evaluated grasses, bermudagrass and brachiariagrass. Significant decreases in the total number of protozoa/mL of rumen content, Entodinium and ciliates belonging to subfamily Diplodiniinae were observed at higher level of PFDA addition in the rumen. Also, Epidinium and Holotrich ciliates disappeared from the rumen. Significant correlations were observed of the ciliate concentration and composition as a function of dietary lipids content. Entodinium composition increased from 68.0% to 99.6% and Diplodiniinae reduced from 30.4% to 0.4% with increasing PFAD level indicating higher fat toxicity effect on the Diplodiniinae ciliates than Entodinium species and direct action of the larger ciliates on the fibre degradation.

  15. Porpostoma guamensis n. sp., a philasterine scuticociliate associated with brown-band disease of corals.

    Science.gov (United States)

    Lobban, Christopher S; Raymundo, Laurie M; Montagnes, David J S

    2011-01-01

    Brown band disease of coral is caused by a ciliate that consumes the tissue of the corals in the genus Acropora. We describe the ciliate associated with this disease on Guam, based on: general morphology, division stages, and ciliature observed on live and protargol-stained specimens; modification of the oral structures between divisional stages, observed on protargol-stained specimens; and some aspects of behavior in field and laboratory studies. Porpostoma guamensis n. sp. is elongate and has ciliature typical for the genus; live cells are 70-500 × 20-75 μm; the macronucleus is sausage-like, elongate but often bent, positioned centrally along the main cell axis; the oral ciliature follows a basic pattern, being composed of three adoral polykinetidal regions, as described for other species in the genus, although there is variability in the organization, especially in large cells where the three regions are not easily distinguished. Ciliates fed on coral with their oral region adjacent to the tissue, which they engulfed, leaving the coral a bare skeleton. Both zooxanthellae and nematocysts from coral occurred in the ciliates. Zooxanthellae appeared to be ingested alive but deteriorated within 2-3 days. Ciliates formed thin-walled division cysts on the coral and divided up to 3 times. Cysts formed around daughter cells within cysts. We provide some observations on the complex division pattern of the ciliate (i.e. tomont-trophont-cyst) and propose a possible complete pattern that requires further validation.

  16. Influence of palm fatty acid distillate on rumen degradability and protozoa population in buffaloes

    Directory of Open Access Journals (Sweden)

    Raul Franzolin

    Full Text Available Oil and fat as energy sources at low cost are relevant in ruminant nutrition. The aim of this study was to evaluate the effects of palm fatty acid distillate (PFAD on the degradability and ciliate protozoa population in buffalo. Four rumen fistulated buffaloes were fed a basal diet in a Latin square (4x4 design trial. Treatments were designed with four of different levels of PFAD added directly into the rumen: 0; 200; 420 and 500 g/animal/d. High levels of PFAD (420 and 500 g/d promoted higher degradation of the soluble fraction and lower in potentially degradable fraction of dry matter (DM and neutral detergent fibre (NDF with lower values of potential and effective degradability in two evaluated grasses, bermudagrass and brachiariagrass. Significant decreases in the total number of protozoa/mL of rumen content, Entodinium and ciliates belonging to subfamily Diplodiniinae were observed at higher level of PFDA addition in the rumen. Also, Epidinium and Holotrich ciliates disappeared from the rumen. Significant correlations were observed of the ciliate concentration and composition as a function of dietary lipids content. Entodinium composition increased from 68.0% to 99.6% and Diplodiniinae reduced from 30.4% to 0.4% with increasing PFAD level indicating higher fat toxicity effect on the Diplodiniinae ciliates than Entodinium species and direct action of the larger ciliates on the fibre degradation.

  17. Germinação de sementes de Asteraceae nativas no Rio Grande do Sul, Brasil Germination of seeds of Asteraceae natives of Rio Grande do Sul, Brazil

    Directory of Open Access Journals (Sweden)

    Alfredo Gui Ferreira

    2001-08-01

    Full Text Available Aquênios (sementes recém coletados, de treze espécies nativas de Asteraceae comuns nos ambientes abertos da região sul do Brasil foram testados quanto à germinação em temperaturas alternadas ( 20/10; 25/15; 30/20; 35/25°C e sob temperaturas constantes ( 20; 25 e 30°C com ou sem luz. A temperatura ótima para germinação varia entre as espécies, sendo que as espécies Elephantopus mobilis; Eupatorium laevigatum; Mikania cordifolia; Senecio oxyphyllus; Trixis prastens germinam de forma semelhante em todas temperaturas testadas. Eclipta alba tem sua germinação promovida a 30°C. Tagetes minuta tem a germinação das sementes promovida a 20°C. Em Senecio heterotrichius; S. selloi; Stenachaenium campestre; Symphyopappus casarettoi e Vernonia nudiflora as sementes germinam igualmente a 20 ou 25°C.. A luz promoveu a germinação de todas espécies exceto para Stenachaenium campestre e Tagetes minuta, sendo esta última espécie fotoblástica negativa. Quanto ao tempo médio de germinação, as espécies podem ser divididas em ; rápidas- menos de 5 dias (Baccharis trimera; Eclipta alba; Elephantopus mollis; Stenachaenium campestre e Vernonia nudiflora; intermediárias: entre 5 e 10 dias ( Eupatorium laevigatum; Mikania cordifolia e Tagetes minuta ; lentas: mais de 10 dias (Senecio heterotrichius; S.oxyphyllus; S.selloi; Symphyopappus casarettoi e Trixis praestans.Os resultados mostram que a germinação de sementes de Asteraceas variam com a temperatura e o regime de luz; podendo prover uma base inicial para interpretação de efeitos sazonais sobre a germinação e estabelecimento a campo. Em adição, comentários sobre o substrato ágar ou areia são feitos.Achenes of thirteen native Asteraceae species common to the natural grassland or weeds of the southern region of Brazil were tested for germination over a range of alternating temperatures ( 20/10; 25/15; 30/20 and 35/25°C, and under constant temperatures ( 20; 25 and 30°C with

  18. Secondary productivity of main microcrustacean species of two tropical reservoirs in Brazil and its relationship with trophic state

    Directory of Open Access Journals (Sweden)

    Sofia L. Brito

    2016-02-01

    Full Text Available In view of the importance of the zooplankton community in energy transfer between trophic levels, this study had as objective to estimate the secondary productivity rates of the main microcrustacean in two large tropical reservoirs, Três Marias and Furnas, state of Minas Gerais, Brazil. We included Thermocyclops minutus, Bosminopsis deitersi, Bosmina hagmanni, Ceriodaphnia cornuta and Moina minuta in Três Marias Reservoir, and, in Furnas, these species and also Notodiaptomus henseni, Daphnia ambigua, Ceriodaphnia silvestrii, Diaphanosoma spinulosum, D. fluviatile and Bosmina freyi. With respect to total productivity, higher rates were obtained in the rainy period in both reservoirs (P<0.000, with mean values during the dry and rainy periods of 0.44 and 1.80 mg DW m-3 d-1 for Três Marias Reservoir and 1.50 and 3.10 mg DW m-3 d-1 for Furnas Reservoir, respectively. Thermocyclops minutus was the most important species in terms of density and biomass in Três Marias Reservoir, and M. minuta showed the highest rates of secondary productivity, especially during the rainy period. In Furnas, N. henseni and D. ambigua showed the highest productivity rates in both periods, and C. silvestrii, C. cornuta, D. spinulosum and D. fluviatile were also important during the rainy period. Values of the productivity:biomass ratio were usually lower for the copepods; the cladoceran M. minuta showed the highest values in both reservoirs. The higher microcrustacean secondary productivity rates in Furnas Reservoir are probably the result of greater efficiency in energy transfer between trophic levels, due to the presence of phytoplankton species with better nutritional quality in this environment.

  19. About the presence of Phlebotomus sergenti Parrot, 1917 (Diptera: Psychodidae in Eastern Sicily, Italy

    Directory of Open Access Journals (Sweden)

    D'Urso V.

    2004-09-01

    Full Text Available The note reports the data of a three-year sand fly investigation (1997-99 carried out in Eastern Sicily (Italy with the aim to study the distribution of Phlebotomus sergenti. The survey involved a densely inhabited area at the foot of Mount Etna and the area of Iblei mounts. A total of 9,095 sand flies, of which 63.4 % males, were captured. Five species belonging to the genus Phlebotomus (P. perniciosus, P. perfiliewi, P. neglectus, P. sergenti and P. papatasi and one to the genus Sergentomyia (S. minuta were identified. Both the prevalence and distribution of the species were different within the two areas studied. In Mount Etna area, P. perniciosus (77.7 % was the prevalent species followed by S. minuta (19.8 %, P. sergenti (2.0 %, P. neglectus (0.3 % and P. papatasi (0.2 %. While in Iblei mounts region S. minuta (84,5 % showed the highest prevalence, followed by P. perniciosus (14.4 %, P. perfiliewi (0,9 % and P. neglectus (0,1 %. Here, P. sergenti was a very rare species (‹ 0.02. P. sergenti was mostly associated to domestic habitats of peri-urban and urban zones located between two and 750 m a.s.l. The density values of P. sergenti. expressed as number of specimens/m2 of sticky trap, were between 0.3 and 5.5 with the highest value in the hilly collecting sites. The low observed abundance of P. sergenti does not allow to draw any prediction on the role that the species could play in the transmission of leishmaniasis in Sicily.

  20. Myxomycetes of the nature reserve near Wałbrzych (SW Poland. Part I. List of taxa and quantitative analysis

    Directory of Open Access Journals (Sweden)

    Wanda Stojanowska

    2014-08-01

    Full Text Available A total number of 103 Myxomycetes taxa is known of the "Przełomy pod Księżem" nature reserve. In 2002, 89 taxa were recorded in the reserve. The following families prevail: Physaraceae - 24.4 %, Arcyriaceae, Didymiaceae and Stemonitidaceae - 15.8 % each, Trichiaceae - 12.2 %. Dominant genera are: Physarum - 14 species, Arcyria - 9, Trichia - 8, Cribraria and Diderma - 7 each. Three species were recorded for the first time in Poland: Arcyria minuta, Cribraria persooni and Symphytocarpus flaccidus. The occurrence of Didymium serpula and Lepidoderma tigrinum in Lower Silesia was confirmed after 100 years.

  1. UTJECAJ RAZLIČITIH DEZINFEKCIJSKIH PRIPRAVAKA NA REZULTATE LEŽENJE PILIĆA

    OpenAIRE

    Lolić, Marica; Matković, Kristina; Vučemilo, Marija; Periškić, Marin; Balić, Davor; Škrivanko, Mario; Kičec, Zvezdan

    2011-01-01

    Istražen je utjecaj primijenjenih postupaka na smanjenje broja mikroorganizama i rezultate leženja pilića, primjenom različitih dezinfekcijskih pripravaka, koncentracija i vremena izlaganja. Rabili su se slijedeći dezinfekcijski pripravci: Virkon® S 0,5% i 1%; Preventol® 0,5% i 1%; Bigvasan 0,4% i 0,5%; Virocid® 0,15% i 0,25%; Halamid® 0,4% i formaldehid (21 mL formalina 40% + 21 mL vode + 17 g hipermangana), uz vrijeme ekspozicije od 15 minuta osim za formaldehid, gdje je vrijeme ekspozicije...

  2. New cave species of Sinella Brook, 1882 from China (Collembola: Entomobryidae).

    Science.gov (United States)

    Zhao, Lina; Zhang, Feng

    2016-01-01

    Springtails, especially entomobryids, are abundant in Karst faunas. Five new species of Sinella Brook are described here from caves in southern China: S. liuae sp. nov., S. hunanica sp. nov., S. tigris sp. nov., S. minuta sp. nov. and S. tiani sp. nov. A new record of Sinella sineocula Chen & Christiansen, is also recorded. These species differ in claw structure, chaetae on ventral side of the head, and body chaetotaxy. An updated key to cave species of Sinella from China is provided. PMID:27615947

  3. Princip rada i primjena visokih tlakova u prehrambenoj industriji

    OpenAIRE

    Bosiljkov, T.; Tripalo, B.; Ježek, D.; Brnčić, M.; Karlović, S.

    2010-01-01

    Primjena visokog tlaka kao nove netoplinske metode obrade namirnica u prehrambenoj industriji nalazi sve veću primjenu u svim fazama proizvodnje. Ova nova tehnologija doživljava svoj najveći tehnološki napredak tijekom devedesetih godina prošlog stoljeća. Glavna prednost obrade visokim tlakom u odnosu na konvencionalne metode obrade je u kraćem vremenu obrade koja se u većini slučajeva kreće u vremenskom intervalu od nekoliko sekundi do 30 minuta. Obrada čvrste ili tekuće namirnice s ambalažn...

  4. Ultrazvuk i vibracije sa stanovišta profesionalnog oštećenja

    OpenAIRE

    Landström, U.

    1984-01-01

    Opisuju se današnje spoznaje o štetnim učincima ultrazvuka i niskofrekventnih vibracija. Istraživanja su provedena na nekoliko parametara i posebice s obzirom na budnost. U ispitanika koji su bili izvrgnuti ultrazvuku od 6 Hz i 115 dB i vibraciji cijelog tijela od 3 Hz i 110 dB tijekom 15-20 minuta mjeren je ritam pulsa, krvni tlak i sniman je EEG. Utvrđeno je da postoji značajna korelacija između stupnja ekspozicije i smanjenja budnosti. Ova zapažanja upućuju na to da niskofrekventne vibraci...

  5. Primjena mikrovalnog zračenja u organskoj sintezi

    OpenAIRE

    Zrinski, Irena; Maksić, Mirjana

    2005-01-01

    Zanimanje za primjenu mikrovalnog zračenja u organskoj sintezi u posljednjem desetljeću u neprekidnom je usponu. Jedna od najbitnijih prednosti te neklasične metode sinteze u odnosu na klasično zagrijavanje je znatno skraćenje reakcijskog vremena (s nekoliko sati, dana na nekoliko sekundi, minuta). Iz tih se razloga ta tehnika sve više upotrebljava u znanstveno-akademskim institucijama i u industriji. U ovom članku opisani su temeljni principi interakcije mikrovalnog zračenja i materije, djel...

  6. Optimizacija postupka postavljanja opreme u poduzećima

    OpenAIRE

    Grzybowska, K.; Gajdzik, B.

    2012-01-01

    Brzo postavljanje opreme i alata u stroj na proizvodnoj liniji je ključni preduvjet za povećanje fl eksibilnosti proizvodnje. Metodologija SMED Izmjena opreme u jednoznamenkastom broju minuta) je primjer koji omogućava smanjenje vremena postavljanja gotovo na minimum. U članku se predstavljaju teoretske osnove i pravila koje je potrebno poštivati, kao i studija slučaja koji je proveden u izabranom poduzeću. Ovaj rad također odgovara na pitanja da lije SMED metodologija primjenjiva u metaluršk...

  7. Mycocinogenic yeasts isolated from Amazon soils of the Maracá Ecological Station, Roraima-Brazil

    Directory of Open Access Journals (Sweden)

    Vital Marcos José Salgado

    2002-01-01

    Full Text Available The 240 yeasts isolated from soils of the Maracá Ecological Station in the Brazilian Amazon were identified and screened for mycocin production. These strains included 82% of ascomycetous and 18% basidiomicetous affinities and the prevalent species were Candida etchellsii, Candida famata, Candida robusta, Candida rugosa, Candida valida, Debaryomyces hansenii, Cryptococcus albidus, Cryptococcus laurentii, Rhodotorula glutinis, Rhodotorula minuta and Rhodotorula mucilaginosa. Mycocins able to kill some yeasts were produced by 6 strains identified as Issatchenkia sp., Saccharomyces exiguus?, Williopsis saturnus, var. subsufficiens, and 3 W. saturnus according to 26S rDNA D1/D2 region sequence and phenotypic data.

  8. Calorific value, lipid content and radioactivity of common species from Hornsund, southwest Spitsbergen

    OpenAIRE

    Wolowicz, Maciej; Szaniawska, Anna

    1986-01-01

    In the summer of 1981 the common flora and fauna of 28 species from Hornsund were collected, and the energy value, lipid content and global activity determined. It was found that the plants had low energy values, varying from 12.26 2 0.42 kJ g-' dry weight to 15.45 +1.00 kJ-' dry weight. The highest values in animals were noted in Liparis liparis (Pisces) 22.15 2 0.89kJg-' dry weight, and Sagitta ekgans (Chaetognatha) 20.64 2 0.49 kJ g-', the lowest being in Orchomene minuta (Amphipoda) 11.30...

  9. Isotopic fractionation and trophic position of zooplankton species in the Upper Paraná River floodplain.

    Science.gov (United States)

    Santana, A R A; Benedito, E; Ducatti, C; Lansac-Tôha, F A

    2011-02-01

    This study aimed to evaluate the isotopic fractionation and trophic position of three zooplankton species (Notodiaptomus amazonicus, Moina minuta and Bosmina hagmanni) in the Upper Paraná River floodplain. We predict that phytoplankton is the main food resource used by these species. Three zooplankton samples and three phytoplankton samples were taken from each sampling site, with three to four samples collected for each species. The number of individuals for samples varied according to the body size: from 100 to 130 individuals for Notodiaptomus amazonicus; 150 to 200 for Moina minuta; and from 250 to 300 for Bosmina hagmanni. The isotopic values for δ13C and δ15N were determined using mass spectrophotometer. The isotopic fractionation of 13C was performed according to the relationship Δ = δ13C zooplankton - δ13C phytoplankton. To determine the possible trophic position of these species, we used the expression TL = (δ15N zooplankton - δ15N phytoplankton)/Δ+ 1. The species showed high variation in isotopic fractionation and in trophic position in the different environments. We verified that the species use other food resources in addition to phytoplankton. The elucidation and understanding of the trophic position of the organisms based on stable isotopic analysis offers complementary information to traditional techniques. This analysis helps explain the flow of matter and energy in the food chain of floodplain aquatic environments as well as trace the trophic relationships involved in the ecological roles and strategies of distinct species. PMID:21437401

  10. [Influence of the phase of the number and demographic structure of the water vole population on its infection by helminthes].

    Science.gov (United States)

    Chechulin, A I; Guliaev, V D; Panov, V V; Krivopalov, A V

    2005-01-01

    In this work we have analyzed results of the long-term investigations of the helminthes distribution in the various demography groups of the water vole population (Arvicola terrestris L.) in North Baraba (Novosibirsk region). The data on the dominant parasites of these rodents: trematodes Notocotylus noyeri (Joyeux, 1922), cestodes Limnolepis transfuga Spassky et Merkuscheva, 1967, nematodes Capillaria wioletti Ruchljadeva, 1950, Longistriata minuta (Dujarden, 1845) and Heligmosomum costellatum (Dujarden, 1845) have shown that the number of parasites in biocenosis are connected with different factors, such as the demographic structure of the host population, the alternation of hosts number and conditions of the environment (dry and damp phases of the climatic cycle). In the dry phase the main parasitize load N. noyeri, L. transfuga and C. wioletti connects with the breeding group; in the damp period - with immature rodents. Independently of the phase climatic cycle and the density of the water vole population the great bulk of nematodes L. minuta and H. costellatum was uncovered of the immature individuals. In any case the number of helminthes changed synchronously with such of the its host. PMID:16316057

  11. Global Collembola on Deception Island.

    Science.gov (United States)

    Greenslade, Penelope; Potapov, Mikhail; Russell, David; Convey, Peter

    2012-01-01

    Three new non-indigenous springtail species are recorded in recent collections made on Deception Island, South Shetland Islands, maritime Antarctic: Deuteraphorura (Deuteraphorura) cebennaria (Gisin) (Collembola: Onychiuridae), Mesaphorura macrochaeta Rusek (Tullbergiidae), and Proisotoma minuta Axelson (Isotomidae). One of these, D. (D.) cebennaria, is described. Additionally, two new indigenous species, Mesaphorura macrochaeta Rusek and Proisotoma minuta Axelson, are also recorded. The total number of Collembola species now known from the island is 14, comprised of eight native species and six non-indigenous species. This number of non-indigenous species recorded at Deception Island compares with only a single non-indigenous springtail recorded at any other maritime or continental Antarctic location. The reason underlying this high level of occurrence of non-indigenous species on Deception Island is likely to be a combination of the island's high level of human visitation and the presence of relatively benign terrestrial habitats associated with areas of geothermal activity. Two of the new records represent species recently assessed as being of the highest risk to become invaders in the less extreme environments of the subantarctic, thereby emphasising the importance and urgency of adopting and applying effective biosecurity measures to protect the unique and vulnerable ecosystems of this region. Also documented are the impacts on the soil fauna of the island from human trampling, which drastically reduced densities of both native and non-indigenous species to 1% of the abundance typical of non-trampled sites. PMID:23438196

  12. Spionidae (Annelida: 'Polychaeta': Canalipalpata) from Lizard Island, Great Barrier Reef, Australia: the genera Malacoceros, Scolelepis, Spio, Microspio, and Spiophanes.

    Science.gov (United States)

    Meißner, Karin; Götting, Miriam

    2015-09-18

    Seven species belonging to the spionid genera Malacoceros, Scolelepis, Spio, Microspio, and Spiophanes were found during the polychaete workshop on Lizard Island in August 2013. One species is new to science and named Scolelepis inversa n. sp., another Scolelepis species is probably also a new species but was represented in our samples by only a single specimen and not formally described. All other species have been reported previously from Australia. Species diagnoses of all species found during the workshop and of Scolelepis balihaiensis Hartmann-Schröder, 1979, Microspio microcera (Dorsey, 1977) and M. minuta (Hartmann-Schröder, 1962) have been critically reviewed and amended based on the study of type material. The potential synonymy of Microspio minuta (Hartmann-Schröder, 1962) and M. microcera (Dorsey, 1977) is discussed. The new combination Spio jirkovi (Sikorski, 1992) proposed by Sikorski (2013) is returned to Malacoceros. We added DNA barcodes for five species collected in the Lizard Island area to public databases which will be useful in future phylogenetic and phylogeographic studies. For Microspio we provide the first sequence data for this genus.

  13. Nuevos registros de piojos (Insecta: Phthiraptera en aves domésticas y ornamentales en Chile New records of lice (Insecta: Phthiraptera from domestic and ornamental birds from Chile

    Directory of Open Access Journals (Sweden)

    D González-Acuña

    2009-01-01

    Full Text Available Por medio del examen del plumaje de aves domésticas y ornamentales en Chile se reconfirma la presencia de los phthiraptera Menopon gallinae, Goniodes gigas, Goniocotes gallinae y Menacanthus stramineus en la gallina doméstica, Gallus gallus domesticus y se registra además por primera vez en el país la especie Menacanthus pallidulus. En aves ornamentales se registran en pavo, Meleagris gallipavo, la especie M. stramineus, en pavo real, Pavo cristatus las especies Goniodes pavonis y Amrysidea minuta, en faisán común Phasianus colchicus las especies Goniocotes chrysocephalus y Oxylipeurus colchicus y en ganso doméstico Anser anser las especies Anaticola anseris y Trinoton anserinum. Los siete registros realizados en aves ornamentales representan nuevos reportes para Chile.The objective of this study was to confirm and update previous records of Phthiraptera in domestic and ornamental birds of Chile, through the examination of the plumage of the birds. The presence of Menopon gallinae, Goniodes gigas, Goniocotes gallinae and Menacanthus stramineus species on the domestic fowl Gallus gallus domesticus was confirmed, and the Menacanthus pallidulus is reported for the first time in Chile. In ornamental birds, seven species of lice were reported for the first time in Chile: M. stramineus in wild Turkey (Meleagris gallopavo, Goniodes pavonis and Amrysidea minuta in the Indian Peafowl, Goniocotes chrysocephalus and Oxylipeurus colchicus in the Common Pheasant (Phasianus colchicus, and Anaticola anseris and Trinoton anserinum in the Greylag Goose (Anser anser.

  14. Investigating of yeast species in wine fermentation using terminal restriction fragment length polymorphism method.

    Science.gov (United States)

    Sun, Yue; Liu, Yanlin

    2014-04-01

    The objective of this study was to examine the potential of terminal restriction fragment length polymorphism (T-RFLP) in monitoring yeast communities during wine fermentation and to reveal new information on yeast community of Chinese enology. Firstly, terminal restriction fragment (TRF) lengths database was constructed using 32 pure yeast species. Ten of these species were firstly documented. The species except for Candida vini, Issatchenkia orientalis/Candida krusei, Saccharomyces bayanus, Saccharomyces pastorianus, Saccharomyces cerevisiae, Saccharomyces kudriarzevii and Zygosaccharomyces bisporus could be distinguished by the T-RFLP targeting 5.8S-ITS rDNA. Moreover, the yeast communities in spontaneous fermentation of Chardonnay and Riesling were identified by T-RFLP and traditional methods, including colony morphology on Wallerstein Nutrient (WLN) medium and 5.8S-ITS-RFLP analysis. The result showed that T-RFLP profiles of the yeast community correlated well with that of the results identified by the traditional methods. The TRFs with the highest intensity and present in all the samples corresponded to Saccharomyces sp. Other species detected by both approaches were Hanseniaspora uvarum, Metschnikowia pulcherrima, Pichia minuta var. minuta, Saccharomycodes ludwigii/Torulaspora delbrueckii and Candida zemplinina. This study revealed that T-RFLP technique is a rapid and useful tool for monitoring the composition of yeast species during wine fermentation.

  15. The role of phytophysiognomies and seasonality on the structure of ground-dwelling anuran (Amphibia in the Pampa biome, southern Brazil

    Directory of Open Access Journals (Sweden)

    FRANCIELE P. MARAGNO

    2013-09-01

    Full Text Available ABSTRACT Considering that habitat use by amphibians is related both with climate and environmental features, we tested the hypothesis that anuran assemblages found in different phytophysiognomies and in different seasons vary in structure. Additionally, we searched for species which can be indicators of habitat and seasons. The study was conducted in the Pampa biome, southern Brazil. Sampling was done through pitfall traps placed in three phytophysiognomies: grassland, ecotone grassland/forest; and forest. The seasonality factor was created by grouping months in warn and cold seasons. Sixteen species were found and the assemblages were influenced both by phytophysiognomies and climatic seasonality. In a paired comparison, the three phytophysiognomies differed in structure of assemblage from each other. Physalaemus henselii, P. riograndensis, Pseudopaludicola falcipes and Pseudis minuta were indicators of ecotone. Leptodactylus gracilis and Physalaemus biligonigerus were indicators of grassland. None species was indicator of forest. Most of the species were indicators of warm season: Elachistocleis bicolor, Leptodactylus fuscus, L. gracilis, L. latinasus, L. latrans, L. mystacinus, Physalaemus biligonigerus, P. cuvieri and Pseudis minuta. None species was indicator of cold season. We found that even for species of open areas, as Pampa, heterogeneous phytophysiognomies are important for maintaining abundance and constancy of populations of anuran.

  16. Caprellidae (Crustacea: Peracarida: Amphipoda) from the Red Sea and Suez Canal, with the redescription of Metaprotella africana and Paradeutella multispinosa.

    Science.gov (United States)

    Zeina, Amr F; Guerra-García, José M

    2016-01-01

    The Caprellidae from the Red Sea are reviewed based on the literature data and new collections from the Hurghada coasts. So far, only six valid species has been reported from the Red Sea and Suez Canal: Caprella equilibra Say, 1818, Hemiaegina minuta Mayer, 1890, Metaprotella africana Mayer, 1903, Paracaprella pusilla Mayer, 1890 and Paradeutella multispinosa Schellenberg, 1928 and Pseudocaprellina pambanensis Sundara Raj, 1927. The type material of M. africana (deposited in the Muséum nacional d'Histoire naturelle, Paris) and Paradeutella multispinosa (deposited in the Museum für Naturkunde, Berlin) are redescribed and illustrated in detail. P. pambanensis and H. minuta were the most abundant species in the collections along the northern coast. Most of the sampling effort has been focused on algae from shallow waters; additional substrates such as sediments, hydroids and coral rubble, especially from areas deeper than 15 meters should be explored. The number of caprellid species in the Red Sea is low compared to adjacent waters, as the Mediterranean Sea. However, further research and more extensive caprellid collections should be conducted along the coasts of Saudi Arabia, Yemen, Sudan and Eritrea, which are still unexplored. PMID:27394584

  17. Non-typeable Haemophilus influenzae decreases cilia beating via protein kinase C epsilon

    Directory of Open Access Journals (Sweden)

    Bailey Kristina L

    2012-06-01

    Full Text Available Abstract Background Haemophilus influenzae infection of the nasal epithelium has long been associated with observations of decreased nasal ciliary beat frequency (CBF and injury to the ciliated epithelium. Previously, we have reported that several agents that slow CBF also have the effect of activating protein kinase C epsilon (PKCϵ activity in bronchial epithelial cells. The subsequent auto-downregulation of PKCϵ or the direct inhibition of PKCϵ leads to the specific detachment of the ciliated cells. METHODS: Primary cultures of ciliated bovine bronchial epithelial cells were exposed to filtered conditioned media supernatants from non-typeable H. influenzae (NTHi cultures. CBF and motile points were measured and PKCϵ activity assayed. Results NTHi supernatant exposure significantly and rapidly decreased CBF in a dose-dependent manner within 10 minutes of exposure. After 3 hours of exposure, the number of motile ciliated cells significantly decreased. Direct measurement of PKCϵ activity revealed a dose-dependent activation of PKCϵ in response to NTHi supernatant exposure. Both CBF and PKCϵ activity changes were only observed in fresh NTHi culture supernatant and not observed in exposures to heat-inactivated or frozen supernatants. Conclusions Our results suggest that CBF slowing observed in response to NTHi is consistent with the stimulated activation of PKCϵ. Ciliated cell detachment is associated with PKCϵ autodownregulation.

  18. Microfaunal indicators, Ciliophora phylogeny and protozoan population shifts in an intermittently aerated and fed bioreactor

    Energy Technology Data Exchange (ETDEWEB)

    Ntougias, Spyridon, E-mail: sntougia@env.duth.gr [Democritus University of Thrace, Department of Environmental Engineering, Laboratory of Wastewater Management and Treatment Technologies, Vas. Sofias 12, 67100 Xanthi (Greece); Tanasidis, Spartakos; Melidis, Paraschos [Democritus University of Thrace, Department of Environmental Engineering, Laboratory of Wastewater Management and Treatment Technologies, Vas. Sofias 12, 67100 Xanthi (Greece)

    2011-02-28

    Microfauna community structure was examined in the mixed liquor of a bench-scale bioreactor equipped with an intermittent aeration and feeding system. The reactor was operated under an intermittent aeration of 25 min in every 1 h and varying feeding conditions (0.264, 0.403 and 0.773 kg BOD{sub 5}/m{sup 3} d). A total of 14 protozoan and metazoan taxa were identified by microscopic examination. Sessile ciliates, followed by crawling ciliates, were the major protozoan groups under 0.403 kg BOD{sub 5}/m{sup 3} d organic loading conditions, while sessile ciliate population was remarkably increased under an organic loading of 0.773 kg BOD{sub 5}/m{sup 3} d. Principal Component Analysis and Pearson correlation coefficient tests were performed in order to reveal relationships between microfauna community and operational parameters. Ciliophora specific-18S rRNA gene clone library was constructed to identify ciliate diversity under 0.773 kg BOD{sub 5}/m{sup 3} d organic loading conditions. Ciliophora diversity consisted of members of Aspidiscidae, Epistylidae, Opisthonectidae and Vorticellidae, with the majority of the clones being associated with the species Vorticella fusca. At least one novel phylogenetic linkage among Ciliophora was identified. Comparisons made after molecular characterization and microscopic examination of Ciliophora community showed that the estimation of broad ciliate groups is useful for ecological considerations and evaluation of the operational conditions in wastewater treatment plants.

  19. Characteristics of microfauna and their relationships with the performance of an activated sludge plant in China

    Institute of Scientific and Technical Information of China (English)

    ZHOU Kexin; XU Muqi; LIU Biao; CAO Hong

    2008-01-01

    The occurrence and abundance of the microfauna groups were compared with the physico-chemical and operational parameters of the Baoding Lugang Sewage Treatment Plant in China. Attached and crawling ciliates were the dominant groups of ciliates. Crawling ciliates and testate amoebae showed a strong association with effluent BOD5 (biochemical oxygen demand). Therefore, these two groups are likely to be useful bioindicators since their number decreased as the process produced poor quality effluent. Testate amoebae also had significant negative correlations with effluent TN (total nitrogen), NH4+-N, SS (suspended solids) and SVI (sludge volumetric index), which means that this group of ciliates may be indicators of good performance of the activated sludge system. Carnivorous ciliates and flagellates had significant positive correlations with SVI, suggesting that these two groups may be indicators of bad settlement conditions of sludge. As identification of the microfauna species is difficult and time-consuming, we recommend using microfauna functional groups to evaluate the performance of the activated sludge system.

  20. Abundance and species composition of planktonic Ciliophora from the wastewater discharge zone in the Bahía Blanca Estuary, Argentina

    Directory of Open Access Journals (Sweden)

    María Sonia Barría de Cao

    2003-09-01

    Full Text Available The specific composition and abundance variation of the ciliate community from a wastewater discharge zone in the Bahía Blanca estuary, Argentina, were studied all throughout a year, from June 1995 to May 1996. The polluted area exhibited high values of particulate organic matter and nutrients, particularly phosphates. Aloricate ciliates were represented by 15 species belonging to the genera Strombidium Claparède & Lachmann, 1859; Strombidinopsis Kent, 1881; Cyrtostrombidium Lynn & Gilron, 1993; Strobilidium Schewiakoff, 1983; Lohmmanniella Leegaard, 1915 and Tontonia Fauré-Fremiet, 1914. Tintinnids were represented by nine species belonging to the genera Tintinnidium Kent, 1881, Tintinnopsis Stein, 1867 and Codonellopsis Jörgensen, 1924. The total abundance of aloricate ciliates reached a peak of 1,800 ind. 1-1 and the total abundance of tintinnids reached a peak of 9,400 ind. 1-1. Tintinnidium balechi Barría de Cao, 1981 was the most abundant ciliate in the community. Considerations on the presence and abundance of ciliates are made in relation to physicochemical and biochemical parameters.

  1. Fifty years of research on serotypes and mating types in Dileptus anser: A review.

    Science.gov (United States)

    Uspenskaya, Zoya I; Yudin, Alexander L

    2016-04-01

    The ciliate Dileptus anser is increasingly used as a laboratory model not only in protozoological research sensu stricto, but also in general biology. However, genetic studies of this ciliate have never been carried out, and this species is new to the comparative genetics of ciliates. This review describes the genetic experiments conducted at the Institute of Cytology of the Russian Academy of Sciences for the last 50 years. Two characters that are classical for the genetics of ciliates, serotypes and mating types were selected for analysis. The results presented do not fit into conventional genetic schemes and may have epigenetic nature. Features of this model that were revealed earlier (the simplest possible system of multiple mating types, full serial dominance of the alleles in the mat locus, the excretion of pheromones, etc.) are promising with regard to interesting comparisons of breeding systems in ciliates. The results obtained in studies of mating pheromones in D. anser have demonstrated that this model is a perspective one for further exploration of intercellular recognition in lower eukaryotes and of other related issues.

  2. Effects of Predation by Protists on Prokaryotic Community Function, Structure, and Diversity in Anaerobic Granular Sludge

    Science.gov (United States)

    Hirakata, Yuga; Oshiki, Mamoru; Kuroda, Kyohei; Hatamoto, Masashi; Kubota, Kengo; Yamaguchi, Takashi; Harada, Hideki; Araki, Nobuo

    2016-01-01

    Predation by protists is top-down pressure that regulates prokaryotic abundance, community function, structure, and diversity in natural and artificial ecosystems. Although the effects of predation by protists have been studied in aerobic ecosystems, they are poorly understood in anoxic environments. We herein studied the influence of predation by Metopus and Caenomorpha ciliates—ciliates frequently found in anoxic ecosystems—on prokaryotic community function, structure, and diversity. Metopus and Caenomorpha ciliates were cocultivated with prokaryotic assemblages (i.e., anaerobic granular sludge) in an up-flow anaerobic sludge blanket (UASB) reactor for 171 d. Predation by these ciliates increased the methanogenic activities of granular sludge, which constituted 155% of those found in a UASB reactor without the ciliates (i.e., control reactor). Sequencing of 16S rRNA gene amplicons using Illumina MiSeq revealed that the prokaryotic community in the UASB reactor with the ciliates was more diverse than that in the control reactor; 2,885–3,190 and 2,387–2,426 operational taxonomic units (>97% sequence similarities), respectively. The effects of predation by protists in anaerobic engineered systems have mostly been overlooked, and our results show that the influence of predation by protists needs to be examined and considered in the future for a better understanding of prokaryotic community structure and function. PMID:27431197

  3. Length-weight relationships for five cladoceran species in an Amazonian lake

    Directory of Open Access Journals (Sweden)

    Paulina Maria Maia-Barbosa

    2005-03-01

    Full Text Available This work shows the length-weight regressions established for the five most frequent and abundant cladoceran species (Bosmina hagmanni, Bosminopsis deitersi, Ceriodaphnia cornuta, Diaphanosoma birgei, and Moina minuta in two stations at Lake Batata. This lake has received for 10 years very fine bauxite processing tailings, which is responsible for the thick layer over the natural sediment still observed in its western section (impacted station. The individuals were separated into size classes, the dry weight values were determined for each class and were used for establishing weight-length equations. Bosminopsis deitersi and Ceriodaphnia cornuta were the species showing the smallest size in the two sampled areas (0.152 to 0.322 mm and Diaphanosoma birgei was the largest (0.284 to 0.722 mm. In the natural station, Moina minuta and Bosminopsis deitersi were the lightest species (0.174 to 0.334 and 0.074 to 0.278 µg, respectively and in the impacted station, Bosmina hagmanni and Moina minuta were the lightest (0.248 to 1.555 and 0.210 to 0.566 µg, respectively. In general, individuals from the impacted station exhibited smaller body sizes (0.152- 0.684 mm and higher weight (0.208 - 1.983 mm, which can be explained by the ingestion of tailing particles. The equations established were shown to be adequate for weight estimates of the analyzed species since the differences found between the observed and estimated weights values were not statistically significant.Este trabalho apresenta as regressões peso-comprimento estabelecidas pela primeira vez, para algumas espécies de cladóceros do Brasil, e para as cinco mais freqüentes e abundantes de duas estações do lago Batata (Bosmina hagmanni, Bosminopsis deitersi, Ceriodaphnia cornuta, Diaphanosoma birgei, Moina minuta. Este lago recebeu por 10 anos rejeito de fina granulometria resultante do processamento da bauxita, e que ainda hoje forma uma espessa camada sobre o sedimento natural da por

  4. Cyc17, a meiosis-specific cyclin, is essential for anaphase initiation and chromosome segregation in Tetrahymena thermophila.

    Science.gov (United States)

    Yan, Guan-Xiong; Dang, Huai; Tian, Miao; Zhang, Jing; Shodhan, Anura; Ning, Ying-Zhi; Xiong, Jie; Miao, Wei

    2016-07-17

    Although the role of cyclins in controlling nuclear division is well established, their function in ciliate meiosis remains unknown. In ciliates, the cyclin family has undergone massive expansion which suggests that diverse cell cycle systems exist, and this warrants further investigation. A screen for cyclins in the model ciliate Tetrahymena thermophila showed that there are 34 cyclins in this organism. Only 1 cyclin, Cyc17, contains the complete cyclin core and is specifically expressed during meiosis. Deletion of CYC17 led to meiotic arrest at the diakinesis-like metaphase I stage. Expression of genes involved in DNA metabolism and chromosome organization (chromatin remodeling and basic chromosomal structure) was repressed in cyc17 knockout matings. Further investigation suggested that Cyc17 is involved in regulating spindle pole attachment, and is thus essential for chromosome segregation at meiosis. These findings suggest a simple model in which chromosome segregation is influenced by Cyc17. PMID:27192402

  5. Linking foraging strategies of marine calanoid copepods to patterns of nitrogen stable isotope signatures in a mesocosm study

    DEFF Research Database (Denmark)

    Sommer, Frank; Saage, A.; Santer, B.;

    2005-01-01

    The foraging modes of calanoid copepods differ in that stationary suspension-feeding is more easily detected by prey with strong escape responses (ciliates) than is 'cruising' or 'ambushing' feeding. Thus, the ability of a copepod to include heterotrophic prey in its diet may be associated with its...... copepod delta(15)N to generally increase with decreasing copepod density because of increased food availability, and predicted stronger increases for cruising than for stationary suspension-fee ding species. As an assemblage, copepods had a pronounced impact on the food web: diatoms and ciliates decreased...... longicornis, a stationary suspension-feeder, showed a uniform isotopic increase in all mesocosms, which we believe resulted from nutritional stress arising from poor feeding on both ciliates (too fast for ingestion by T. longicornis) and nanoflagellates (too small). However, Pseudocalanus elongatus, a species...

  6. Microbial food web structure in a naturally iron-fertilized area in the Southern Ocean (Kerguelen Plateau)

    Science.gov (United States)

    Christaki, U.; Obernosterer, I.; Van Wambeke, F.; Veldhuis, M.; Garcia, N.; Catala, P.

    2008-03-01

    The objective of this study in the framework of the KErguelen Ocean and Plateau compared Study, 2005-2007 (KEOPS) project was to examine the microbial food web structure within a phytoplankton bloom induced by natural iron fertilization. Integrated bacterial production (BP, 0-100 m) varied 12-fold over the study area (23.5-304 mg C m -2 d -1), while bacterial abundance (0-100 m) varied only by a factor of 2.8. Highest bacterial abundances and rates of BP were observed in the center of the diatom-dominated bloom, and substantial decreases in BP towards the later bloom stage were detectable. The abundance of bacterial predators (heterotrophic nanoflagellates, HNF) showed a significant coupling with BP in the high-nutrient low-chlorophyll (HNLC) area only. In the core of the bloom, BP consumed by HNF was 27%, 29%, 52% and 34% during the four consecutive visits that extended over 4 weeks and was much higher (80-95%) in HNLC waters. The relative contribution of the small-sized (important within (224 mg C m -2, 0-100 m) than outside the bloom (30.5 mg C m -2, 0-100 m). This difference was attributable mainly to tintinnids Cymatocyclis spp. accounting for 30-80% of the total ciliate biomass within the Kerguelen bloom but being rare in the HNLC water. Mixotrophic ciliate biomass accounted for 40-60% of the total aloricate ciliate biomass all over the studied area. This was mainly due to the relatively large size of mixotrophic ciliates present in the samples ( Tontonia antarctica, Strombidium spp. and Laboea strobila). Overall, our results suggest a strong response of bacteria, weak response of HNF, and strong controlling effects on ciliates. The weak coupling between heterotrophic bacteria and HNF and the low abundance of ciliates suggest a low transfer of carbon from the microbial to the classical food web within the Kerguelen bloom.

  7. Balantidium coli-infection in a Finnish horse.

    Science.gov (United States)

    Headley, Selwyn Arlington; Kummala, Elina; Sukura, Antti

    2008-11-25

    Balantidium coli is a ciliated protozoan that inhabits the large intestine of swine, man, rodents, and nonhuman primates. Frequently this organism is associated with enteric diseases in man and nonhuman primates, with rare manifestations of disease in swine and other mammalian species. This report describes a case of B. coli-induced enteric disease in a 15-yr-old, mare, Finnish Horse after an acute onset of colic. Severe hemorrhagic and eosinophilic colitis with intense infiltration of intralesional B. coli-like ciliated protozoan were found histologically. PMID:18922641

  8. Differential lectin binding patterns in the oviductal ampulla of the horse during oestrus

    Directory of Open Access Journals (Sweden)

    S Desantis

    2009-06-01

    Full Text Available We investigated the oligosaccharide sequence of glycoconjugates, mainly sialoglycoconjugates, in the horse oviductal ampulla during oestrus by means of lectin and pre-lectin methods such as the KOH-neuraminidase procedure to remove sialic acid residues and incubation with N-glycosidase F to cleave N-linked glycans. Ciliated cells displayed Nlinked oligosaccharides throughout the cytoplasm. The cilia glycocalyx expressed both N- and O-linked (mucin-type oligosaccharides, both showing a high variety of terminal sequences. In the most non-ciliated cells, the whole cytoplasm contained N-linked oligosaccharides with terminal aGal as well as mucin-type glycans with terminal Forssman pentasaccharides. In a few scattered non-ciliated cells, the whole cytoplasm displayed sialylated N-linked oligosaccharides with terminal Neu5Ac-GalNAc and O-linked glycans terminating with neutral and/or aGalNAc, Neu5Aca2,6Gal/ GalNAc, Neu5AcGalb1,3GalNAc. Supra-nuclear granules, probably Golgi zones, of non-ciliated cells showed mainly Olinked glycans rich in sialic acid residues. The luminal surface of non-ciliated cells showed N-linked oligosaccharides, containing terminal/internal aMan/aGlc, bGlcNAc and terminal aGal, as well as mucin-type oligosaccharides terminating with a large variety of either neutral saccharides or sialylated sequences. Apical protrusions containing O-linked oligosaccharides with terminal Forssman pentasaccharide, Neu5Ac-Galb1,4GlcNAc, Neu5Ac-GalNAc were seen in nonciliated cells scattered along the epithelium. These findings show the presence of sialoglycoconjugates in the oviductal ampulla epithelium of the mare and the existence of different lectin binding profiles between ciliated and non-ciliated (secretory cells, as well as the presence of non-ciliated cell sub-types which might determine functional differences along the ampullary epithelium of mare oviduct.

  9. On combinatorial properties of elementary intramolecular operations

    Directory of Open Access Journals (Sweden)

    Vladimir Rogojin

    2014-11-01

    Full Text Available Here we tackle a problem from biology in terms of discrete mathematics. We are interested in a complex DNA manipulation process happening in eukaryotic organisms of a subclass of ciliate species called {\\it Stichotrichia} during so-called gene assembly. This process is in particular interesting since one can interpret gene assembly in ciliates as sorting of permutations. We survey here results related to studies on sorting permutations with some specific rewriting rules that formalize elementary intramolecular gene assembly operations. The research question is ``what permutation may be sorted with our operations?"

  10. Molecular genetic investigations on Balantidium ctenopharyngodoni Chen, 1955, a parasite of the grass carp (Ctenopharyngodon idella).

    Science.gov (United States)

    Marton, Szilvia; Bányai, Krisztián; Forró, Barbara; Lengyel, György; Székely, Csaba; Varga, Ádám; Molnár, Kálmán

    2016-06-01

    Balantidium ctenopharyngodoni is a common ciliate in Hungary, infecting the hindgut of grass carp (Ctenopharyngodon idella), a cyprinid fish of Chinese origin. Although data have already been presented on its occasional pathogenic effect on the endothelium of the host, generally it is a harmless inhabitant of the gut. Phylogenetic analysis of the 18S rDNA and ITS fragments of this protozoan proved that it is in the closest phylogenetic relationship with endocommensalist and symbiont ciliates of mammals feeding on large volumes of green forage, in a similar way as Balantidium spp. known from algae-eating marine fishes. PMID:27342092

  11. A multi-Species Microalgae Bloom in Bahia de La Paz, Gulf of California, México (June 2008)

    OpenAIRE

    Gárate Lizárraga, Ismael; Band Schmidt, Christine Johanna; AGUIRRE BAHENA, FERNANDO; GRAYEB DEL ALAMO, TANOS

    2009-01-01

    Red tides Patches were observed in Bahía de La Paz in June 17 and 18 of 2008. According to temperature and wind data this bloom occurred under upwelling-like conditions. Examination of the red tide samples showed that the ciliate Myrionecta rubra and two naked dinoflagellates Gyrodinium instriatum and Katodinium glaucum as the main species responsible for this bloom Total density (microalgae and ciliate) at the sampling stations was similar on both days, varying from 4607 × 103 to cells L-1 t...

  12. Ammonium assimilation and regeneration by size-fractionated plankton in permanently well-mixed temperate waters

    Digital Repository Service at National Institute of Oceanography (India)

    LeCorre, P.; Wafar, M.V.M.; Helguen, S.L.; Maguer, J.F.

    by over four orders of magni- tude (Leakey etal., 1993). Nevertheless, several recent studies can be cited in sup- port of the importance of ciliates in N recycling at the level of the microbial food web. They are a significant and often dominant component...,R.W. and TurnerJ.T. (1992) Ecology of planktonic ciliates in marine food webs. Rev. AquaL ScL, 6,139-181. Platt,T. and U.W.K.W. (eds) (1986) Photosynthetic Picoplankton. Can. Bull Fish. AquaL 5c/., 214. Probyn.T.A. (1985) Nitrogen uptake by size...

  13. The role of Scgb1a1+ Clara cells in the long-term maintenance and repair of lung airway, but not alveolar, epithelium

    OpenAIRE

    Rawlins, Emma L.; Okubo, Tadashi; Xue, Yan; Brass, David M; Auten, Richard L.; Hasegawa, Hiroshi; Wang, Fan; Hogan, Brigid L.M.

    2009-01-01

    To directly test the contribution of Scgb1a1+ Clara cells to postnatal growth, homeostasis and repair of lung epithelium, we generated a Scgb1a1-CreERTM “knock-in” mouse line for lineage tracing these cells. Under all conditions tested the majority of Clara cells in the bronchioles both self-renew and generate ciliated cells. In the trachea, Clara cells give rise to ciliated cells but do not self-renew extensively. Nevertheless, they can contribute to tracheal repair. In the postnatal mouse l...

  14. Qualitative importance of the microbial loop and plankton community structure in a eutropic lake during a bloom of Cyanobacteria

    DEFF Research Database (Denmark)

    Christoffersen, K.

    1990-01-01

    , supporting the idea that ciliates are an important link between bacteria and higher trophic levels. During and after the bloom of Aphanizornenon, major fluxes of carbon between bacteria, ciliates and crustaceans were observed, and heterotrophic nanoflagellates played a minor role in the pelagic food web...... carbon accounted for only 4-9% of bacterial carbon demand. Cyclopoid copepods and smallsized cladocerans started to grow after the culmination, but food limitation probably controlled the biomass after the collapse of the bloom. Grazing of micro- and macrozooplankton were estimated from in situ...

  15. Fate of pathogenic Bacillus cereus spores after ingestion by protist grazers

    DEFF Research Database (Denmark)

    Winding, Anne; Santos, Susana; Hendriksen, Niels Bohse;

    to the evolution of Bacillus cereus group bacteria (e.g. B. cereus, B. anthracis, B. thuringiensis) as a pathogen. It has been hypothesized that the spore stage protects against digestion by predating protists. Indeed, B. thuringiensis spores have been shown to be readily ingested by ciliated protists but failed...

  16. The life cycle of the free-living marine nematode Innocuonema tentabunda De Man 1890

    Digital Repository Service at National Institute of Oceanography (India)

    Singh, R.; Ingole, B.S.; Nanajkar, M.R.

    laid eggs in a mass of secreted mucilage, which also favoured the growth of unidentified micro-algae and ciliates, as these were also observed in the mucus. Measurement of egg diameter and the length of each developmental stage was done daily...

  17. Mechanical filtering by the boundary layer and fluid-structure interaction in the superficial neuromast of the fish lateral line system

    NARCIS (Netherlands)

    McHenry, Matthew J.; Strother, James A.; van Netten, Sietse M.

    2008-01-01

    A great diversity of aquatic animals detects water flow with ciliated mechanoreceptors on the body's surface. In order to understand how these receptors mechanically filter signals, we developed a theoretical model of the superficial neuromast in the fish lateral line system. The cupula of the neuro

  18. Evaluation of medicated feeds with antiparasitical and immune-enhanced Chinese herbal medicines against Ichthyophthirius multifiliis in grass carp (Ctenopharyngodon idellus)

    Science.gov (United States)

    Ichthyophthirius multifiliis (Ich) is a widespread ciliated ectoparasite and results in severe economic loss in the aquaculture industry. Since malachite green was banned for using in food fish due to its carcinogenic and teratogenic effects on human, the search of alternative drug to treat I. multi...

  19. Life history of a free-living marine nematode Daptonema normandicum reared in laboratory

    Digital Repository Service at National Institute of Oceanography (India)

    Singh, R.; Ingole, B.S.

    dark: 12 hr light conditions. The food consists primarily of an unidentified bacterium and mixed algae, but diatom and ciliates were also observed in culture. Females produced first batch of eggs at the age of 23 days. Gravid female normally carry 8...

  20. Vertical distribution, grazing and egg production of calanoid copepods during winter-spring in Gullmarsfjorden

    DEFF Research Database (Denmark)

    Titelman, J.; Tiselius, P.

    1998-01-01

    were superfluous throughout the water column. Copepods and ciliates were never correlated. Ingestion as determined from gut fluorescence and egg production analyses suggested a higher degree of herbivory during the spring bloom than before and after. There was potential for copepod predation control of...

  1. Effects of toxic cyanobacteria on plankton assemblage : community development during decay of Nodularia spumigena

    DEFF Research Database (Denmark)

    Engström-Öst, J.; Koski, Marja; Schmidt, K.;

    2002-01-01

    We studied the development of the plankton community in an artificially created toxic Nodularia spumigena bloom during a 2 wk enclosure study at the SW coast of Finland in the Baltic Sea. We measured bacterial abundance, dominant phytoplankton groups and ciliates, as well as concentrations of phy...

  2. External morphology of the cycliophoran dwarf male: a comparative study of Symbion pandora and S. americanus

    DEFF Research Database (Denmark)

    Neves, Ricardo C.; Cunha, Marina R.; Funch, Peter;

    2010-01-01

    microscopy. In both species, anterior and ventral ciliated fields, as well as paired lateral sensorial organs, were identified, thus confirming previous observations. However, new details are described herein such as the penial pouch that encloses the penis. We compare our findings on both Symbion species...

  3. Ciliocytophthoria in clinical virology.

    Science.gov (United States)

    Hadziyannis, E; Yen-Lieberman, B; Hall, G; Procop, G W

    2000-08-01

    Direct immunofluorescence assays (DFAs) are used in the clinical virology laboratory for the rapid detection of viruses. An assessment of the cellularity of specimens submitted for DFA is necessary for the most effective use of this assay. This assessment ensures that an adequate number of the appropriate cells are present for examination. During this assessment, clinical virologists may encounter unfamiliar cellular elements or cellular fragments. One of these elements, ciliocytophthoria, has been misinterpreted as a parasite in specimens submitted for cytologic testing. We describe a similar case in which a technologist thought that ciliocytophthoria possibly represented a ciliated parasite in a nasopharyngeal specimen sent for respiratory syncytial virus DFA. After a thorough morphologic examination, the staff dismissed the possibility of a ciliated parasite. We confirmed this entity as ciliocytophthoria using morphologic criteria and the Diff-Quik stain. This near misidentification of ciliocytophthoria as a ciliated parasite affords us the opportunity to raise the awareness of clinical virologists about ciliocytophthoria. Additionally, we briefly review useful features for differentiating ciliocytophthoria from the only ciliate parasitic for humans, Balantidium coli. Finally, we present the utility of a commonly used cytologic stain, the Diff-Quik stain, for the confirmation of ciliocytophthoria. PMID:10923088

  4. A case report of an uncommon parasitic infection of human balantidiasis.

    Science.gov (United States)

    Kumar, Manochitra; Rajkumari, Nonika; Mandal, Jharna; Parija, S C

    2016-01-01

    Balantidium coli, a large, ciliated pathogen, is known to cause balantidiasis in humans. We report a case of B. coli infection in a 37-year-old male with tuberculosis and presenting with fever, anorexia, mild abdominal pain, and episodes of loose stools for 1 week. PMID:26998438

  5. Trophic role and top-down control of a subarctic protozooplankton community

    DEFF Research Database (Denmark)

    Riisgaard, Karen; Swalethorp, Rasmus; Kjellerup, Sanne;

    2014-01-01

    Plankton succession was investigated in the subarctic Godthåbsfjord, Western Greenland, from March to August 2010. The trophic role of protozooplankton (ciliates and heterotrophic dinoflagellates) was evaluated with emphasis on their seasonal succession and as prey for the copepod community...

  6. Protozoa and their bacterial prey colonize sterile soil fast

    DEFF Research Database (Denmark)

    Altenburger, Andreas; Ekelund, Flemming; Jacobsen, Carsten Suhr

    2010-01-01

    to the atmosphere for a period of 14 months. Bacteria and flagellates occurred in high numbers after 25 days. Ciliates reached high abundance levels after 137 days, followed by amoebae after 245 days. Numbers of distinguishable protozoan morpho-types increased until 245 days after exposure and declined thereafter...

  7. Meeting on the Microbiology of Soils, Autumn 2001: Estimation of protozoan diversity in soil

    DEFF Research Database (Denmark)

    Ekelund, Flemming

    2002-01-01

    Different methods of estimating protozoan diversity in soil are discussed in this paper, with the major emphasis on heterotrophic flagellates. Although many species of ciliates and testate amoebae seem to be unique to the soil environment, the communities of heterotrophic flagellates and naked am...

  8. Rapid identification of rumen protozoa by restriction analysis of amplified 18S rRNA gene

    NARCIS (Netherlands)

    Regensbogenova, M.; Kisidayova, S.; Michalowski, T.; Javorsky, P.; Moon-van der Staay, S.Y.; Hackstein, J.H.P.; McEwan, N.R.; Jouany, J.P.; Newbold, J.C.; Pristas, P.

    2004-01-01

    A rapid method has been developed for molecular identification of rumen ciliates without the need for cultivation. Total DNA was isolated from single protozoal cells by the Chelex method and nearly complete protozoal 18S rRNA genes were amplified and subjected to restriction fragment length polymorp

  9. Symbiosis and Rumen Protozoa

    Science.gov (United States)

    Dillon, Raymond D.

    1970-01-01

    Protozoa inhabiting the rumen of large grazing animals can be used to illustrate symbiotic animal associations. Gives a key to the ciliates most commonly found, several drawings, and a chart relating rumen fauna to the phylogenetic tree of the hosts. (EB)

  10. The ctenophore genome and the evolutionary origins of neural systems

    NARCIS (Netherlands)

    Moroz, Leonid L.; Kocot, Kevin M.; Citarella, Mathew R.; Dosung, Sohn; Norekian, Tigran P.; Povolotskaya, Inna S.; Grigorenko, Anastasia P.; Dailey, Christopher; Berezikov, Eugene; Buckley, Katherine M.; Ptitsyn, Andrey; Reshetov, Denis; Mukherjee, Krishanu; Moroz, Tatiana P.; Bobkova, Yelena; Yu, Fahong; Kapitonov, Vladimir V.; Jurka, Jerzy; Bobkov, Yuri V.; Swore, Joshua J.; Girardo, David O.; Fodor, Alexander; Gusev, Fedor; Sanford, Rachel; Bruders, Rebecca; Kittler, Ellen; Mills, Claudia E.; Rast, Jonathan P.; Derelle, Romain; Solovyev, Victor V.; Kondrashov, Fyodor A.; Swalla, Billie J.; Sweedler, Jonathan V.; Rogaev, Evgeny I.; Halanych, Kenneth M.; Kohn, Andrea B.

    2014-01-01

    The origins of neural systems remain unresolved. In contrast to other basal metazoans, ctenophores (comb jellies) have both complex nervous and mesoderm-derived muscular systems. These holoplanktonic predators also have sophisticated ciliated locomotion, behaviour and distinct development. Here we p

  11. Some new Hypeninae from the Dutch Indies

    NARCIS (Netherlands)

    Prout, A.E.

    1932-01-01

    1. Hadennia purifascia sp. n. ♂ 24 mm. Antenna with ciliation well over diameter of shaft, thickened on inner side by a tuft of scales, probably at about two-fifths shaft (both antennae are broken just beyond the thickening). The broad thickened fold on costa beneath (which is present in all Hadenni

  12. The dynamics of neutrophils in zebrafish (Danio rerio) during infection with the parasite Ichthyophthirius multifiliis

    DEFF Research Database (Denmark)

    Jørgensen, Louise von Gersdorff

    2016-01-01

    Ichthyophthirius multifiliis is a ciliated protozoan parasite infecting the skin and gills of freshwater fish. Neutrophils are attracted to the infection sites, as a part of the innate immune response. In this study a transgenic line of zebrafish (Tg(MPO:GFP)i114) with GFP-tagged neutrophils...

  13. The infection of chicken tracheal epithelial cells with a H6N1 avian influenza virus.

    Directory of Open Access Journals (Sweden)

    Ching-I Shen

    Full Text Available Sialic acids (SAs linked to galactose (Gal in α2,3- and α2,6-configurations are the receptors for avian and human influenza viruses, respectively. We demonstrate that chicken tracheal ciliated cells express α2,3-linked SA, while goblet cells mainly express α2,6-linked SA. In addition, the plant lectin MAL-II, but not MAA/MAL-I, is bound to the surface of goblet cells, suggesting that SA2,3-linked oligosaccharides with Galβ1-3GalNAc subterminal residues are specifically present on the goblet cells. Moreover, both α2,3- and α2,6-linked SAs are detected on single tracheal basal cells. At a low multiplicity of infection (MOI avian influenza virus H6N1 is exclusively detected in the ciliated cells, suggesting that the ciliated cell is the major target cell of the H6N1 virus. At a MOI of 1, ciliated, goblet and basal cells are all permissive to the AIV infection. This result clearly elucidates the receptor distribution for the avian influenza virus among chicken tracheal epithelial cells and illustrates a primary cell model for evaluating the cell tropisms of respiratory viruses in poultry.

  14. Discovery of an opportunistic starfish pathogen, Orchitophrya stellarum, in captive blue crabs, Callinectes sapidus.

    Science.gov (United States)

    Small, H J; Miller, T L; Coffey, A H; Delaney, K L; Schott, E; Shields, J D

    2013-10-01

    Histophagous scuticociliate infections were discovered in blue crabs, Callinectes sapidus, held in research facilities at the Virginia Institute of Marine Science. Ciliates were observed infecting every tissue examined including the gills, heart, muscle, hepatopancreas, and epidermis. Hemolymph smears and histological tissue sections indicated a morphological similarity to Mesanophrys chesapeakensis, the only recorded histophagous ciliate infecting blue crabs. However, subsequent analysis of the ribosomal ITS region (ITS1-5.8S-ITS2) of the ciliate indicated the parasite was Orchitophrya stellarum, a parasitic ciliate previously reported infecting sea stars from Europe, Australia, and North America. A simple Polymerase Chain Reaction (PCR-RFLP) assay was developed to detect and differentiate between O. stellarum and M. chesapeakensis. Its application confirmed the presence of O. stellarum infecting blue crabs held in an additional research facility in Maryland. For growth studies, cultures of O. stellarum grew optimally on 10% blue crab serum in crustacean saline held at 10-20°C. A field survey of blue crabs collected during the winters of 2011-2012 and sea stars (Asterias forbesi) during the winter of 2010 from the Chesapeake Bay and eastern shore of Virginia did not identify additional infected individuals.

  15. Triassic leech cocoon from Antarctica contains fossil bell animal

    DEFF Research Database (Denmark)

    Bomfleur, Benjamin; Kerp, Hans; Taylor, Thomas N.;

    2012-01-01

    , exceptional fossil deposits that preserve soft-bodied organisms provide a rare glimpse of the true biodiversity during past periods of Earth history. We here present an extraordinary find of a fossil ciliate that is encased inside the wall layer of a more than 200 Ma leech cocoon from Antarctica...

  16. The simplicity of males: Dwarf males of four species of Osedax (Siboglinidae; Annelida) investigated by confocal laser scanning microscopy

    DEFF Research Database (Denmark)

    Worsaae, Katrine; Rouse, Greg W

    2010-01-01

    mature sperm to a ciliated duct and seminal vesicle lying just behind the prototroch region. A duct then runs from the seminal vesicle into the dorsal part of the prostomium. The similarity of Osedax males to the larvae of Osedax and other siboglinid annelids as well as similarities shown here...

  17. Effect of temperature and viscosity on swimming velocity of the copepod Acartia tonsa, brine shrimp Artemia salina and rotifer Brachionus plicatilis

    DEFF Research Database (Denmark)

    Larsen, Poul Scheel; Madsen, C.V.; Riisgard, H.U.

    2008-01-01

    Beating cilia are important organelles for swimming in many zooplanktonic aquatic organisms, including many invertebrate larvae, rotifers and ciliates, but other planktonic organisms, such as copepods and brine shrimps, use muscle-powered swimming appendages. In recent studies we found that the t...

  18. Taxonomy and Physiology of un-wanted bacterial flora in activated sludge process. Study in a pilot plant; Taxonomia y fisiologia de la flora bacteriana indeseable en el proceso de fangos activados. Estudio de una plant piloto

    Energy Technology Data Exchange (ETDEWEB)

    Berrocal Escobar, M.; Lopez Fernandez, C. L.; Arias Fernandez, M. E.; Perez Leblic, M. I.; Zapatero Martin, I.; Leton Garcia, P.; Garcia Calvo, E. [Universidad de Alcala de Henares. Madrid (Spain); Aznar Munoz, R.; Rodriguez Medina, P. [Departamento Tecnico y de Calidad de Seragua, S.A. Madrid (Spain)

    1998-12-31

    The activated sludge used in the wastewater depuration in treatment plants could be considered as an artificial microbial ecosystem in balance. In this community which is constituted by free and flocculated bacteria, protozoa, rotifers, nematodes and a few other invertebrates, the stability of the system is maintained by the continuous food competition. The breakdown of this stability due to a high proliferation of filametous bacteria drive to the phenomenon called bulking. Nowadays, to avoid bulking is one of the main objectives in research because is the main cause of the malfunction of wastewater depuration interfering with compaction, settling, thickening and, concentration of activated sludge. In the present work, a taxonomical and physiological study of the microbial community which carries out the cleaning of wastewater in an activated sludge system has been performed by using an airlift bioreactor working in continuous. Activated sludge coming from a conventional wastewater plant was used as inoculum (starter culture). The nutritional conditions and bioreactor system parameters in which the filamentous bacteria grow in excess have been established. Several of filamentous bacteria responsible for bulking have been identified: Sphaerotilus natans, type 021N, Nocardia spp., Microthrix parvicella, Thiotrix I, Thiotrix II, type 0803, type 0581, Nostocoida limicola I and III and, type 1863. In addition, protozoa of groups involved in the depuration process (free-swimming ciliates, attached ciliates, crawling ciliates, carnivorous ciliates, flagellates and amoebae) were observed as well as rotifer and nematode populations. (Author) 13 refs.

  19. The secondary structure of large-subunit rRNA divergent domains, a marker for protist evolution

    DEFF Research Database (Denmark)

    Lenaers, G; Nielsen, Henrik; Engberg, J;

    1988-01-01

    ), Tetrahymena thermophila (ciliate), Physarum polycephalum and Dictyostelium discoideum (slime moulds), Crithidia fasciculata and Giardia lamblia (parasitic flagellates). The folding for the D3, D7a and D10 divergent domains has been refined and a consensus model for the protist 24-26S rRNA structure is...

  20. Models of natural computation : gene assembly and membrane systems

    NARCIS (Netherlands)

    Brijder, Robert

    2008-01-01

    This thesis is concerned with two research areas in natural computing: the computational nature of gene assembly and membrane computing. Gene assembly is a process occurring in unicellular organisms called ciliates. During this process genes are transformed through cut-and-paste operations. We stud

  1. Cryptocoryne aura (Araceae), a new species from West Kalimantan, Indonesia

    DEFF Research Database (Denmark)

    Wongso, Suwidji; Ipor, Isa B.; Tawan, Cheksum S.;

    2016-01-01

    A new species, Cryptocoryne aura Wongso & Ipor, from West Kalimantan, Indonesia, is described and illustrated. It differs from other Cryptocoryne species primarily by having a transparent, ciliate membrane along the leaf margin and a short spathe with a yellow, forward-twisted limb. It has...

  2. Protozoa: a novel Campylobacter reservoir?

    Science.gov (United States)

    In previous in vitro studies we found that Campylobacter jejuni remained viable for longer periods of time when they were cultivated in the presence of Tetrahymena pyriformis (ciliate) and Acanthamoeba castellanii (amoeba) than when they were in an independent planktonic state. Increased survival t...

  3. Structure of the kidney in the coelacanth Latimeria chalumnae with reference to osmoregulation.

    Science.gov (United States)

    Jarial, M S; Wilkins, J H

    2010-02-01

    The morphology of the nephrons of the coelacanth Latimeria chalumnae was investigated by light microscopy. Each nephron is composed of a large renal corpuscle with well-vascularized glomerulus, non-ciliated neck segment, proximal convoluted tubule divided into distinct first and second segments, non-ciliated intermediate segment, distal tubule, collecting tubule and collecting duct. The parietal layer of the Bowman's capsule of the renal corpuscle is composed of low cuboidal cells. The short non-ciliated neck segment is lined by cuboidal epithelium. The first and second proximal segments display a prominent brush border and contain amorphous material in their lumen. The second proximal segment differs from the first segment in having taller columnar epithelium and a relatively narrow lumen. The intermediate segment is lined by non-ciliated columnar epithelium and its lumen appears empty. The distal tubule is narrow in diameter and its cuboidal epithelium is devoid of intercalated cells. A unique feature of L. chalumnae is having binucleate cells in the tubule and collecting duct epithelium. The renal arteries have poorly developed tunica media and its cells contain granular material. The structure of L. chalumnae nephrons correlates well with their osmoregulatory function and resembles those of euryhaline teleosts.

  4. Degradation of copepod fecal pellets

    DEFF Research Database (Denmark)

    Poulsen, Louise K.; Iversen, Morten

    2008-01-01

    from 22% d(-1) (July 2005) to 87% d(-1) (May). Protozooplankton (dinoflagellates and ciliates) in the size range of 20 to 100 mu m were the key degraders of the fecal pellets, contributing from 15 to 53% of the total degradation rate. Free-living in situ bacteria did not affect pellet degradation rate...

  5. An anaerobic mitochondrion that produces hydrogen

    NARCIS (Netherlands)

    Boxma, B.; Graaf, de R.M.; Staay, van der G.W.M.; Alen, T.A.; Richard, G.; Gabalon, T.; Hoek, van A.H.A.M.; Moon - van der Staay, S.Y.; Koopman, W.J.H.; Hellemond, van J.J.; Tielens, A.G.M.; Friedrich, T.; Veenhuis, M.; Huynen, M.A.; Hackstein, J.H.P.

    2005-01-01

    Hydrogenosomes are organelles that produce ATP and hydrogen(1), and are found in various unrelated eukaryotes, such as anaerobic flagellates, chytridiomycete fungi and ciliates(2). Although all of these organelles generate hydrogen, the hydrogenosomes from these organisms are structurally and metabo

  6. EFFECT OF ROOT EXUDATES OF TAGETES SP. ON EGG HATCHING BEHAVIOR OF MELOIDOGYNE INCOGNITA

    Directory of Open Access Journals (Sweden)

    Iruthaya Kalaiselvam

    2011-10-01

    Full Text Available The effect root exudates of pre-planted marigold intercropped with tomato in regulating the hatching behavior of root-knot nematode - Meloidogyne incognita eggs were investigated. Marigold cultivars Tagetes patula, T. minuta, T. erecta, T. erecta (var. Orange, T. erecta (var. Yellow significantly reduced the numbers of second-stage juveniles (J2s in subsequent tomato compared to the tomato-tomato control. Four different concentrations (25, 50, 75 and 100 % of water soluble extract from the selected varieties of Marigold cultivars were filtered and added to the petri dish and infested with the eggs of M. incognita. Data indicate that egg hatching was significantly affected by root exudates of Tagetes sp. however, nematicidal activity was species dependent. Root exudates of T. erecta were lethal to J2 of M. incognita and were inhibitory to the hatch of eggs at the concentration of 75 % or higher.

  7. Dicty_cDB: Contig-U16415-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available ein mRNA, comple... 72 7e-66 10 ( BT014585 ) Lycopersicon esculentum clone 134043F, mRNA seque... 84 5e-65 9...DSM 16790... 476 e-150 CP001140_1067( CP001140 |pid:none) Desulfurococcus kamchatkensis 1... 469 e-150 CP001...3000/F22... 181 2e-58 CP001140_1265( CP001140 |pid:none) Desulfurococcus kamchatken...chr... 809 0.0 BC007562_1( BC007562 |pid:none) Homo sapiens valosin-containing pr... 728 0.0 CR382400_25( CR382400 |pid:none... WO2008142036. 113 1e-62 10 ( AR527753 ) Sequence 56 from patent US 6723837. 113 1e-62 10 ( AC225894 ) Oryza minuta clone

  8. New Hirnantian orthide brachiopods from the type section of the Porkuni Stage (Porkuni quarry, northeastern Estonia

    Directory of Open Access Journals (Sweden)

    Linda Hints

    2012-11-01

    Full Text Available Four new Hirnantian species of orthide brachiopods, Sigmelasma peepi, Mendacella aerinensis, Drabovia? minuta and Tyronella siugensis are described from the type section of the Porkuni Regional Stage in the Porkuni quarry, northeastern Estonia. These species occur in the reef-related shallow-water bituminous limestone (Siuge Member of the Ärina Formation. Sigmelasma peepi and Tyronella siugensis represent the families Wangyuiidae and Tyronellidae, respectively, which were hitherto unknown in the Baltic Ordovician. Additionally, a harknessellid Reuschella sp. is described from the stromatoporoid-coral reefs (Tõrevere Member and skeletal grainstone (Vohilaid Member of the same locality and formation. Together these new finds extend our knowledge of the latest Ordovician brachiopod fauna in the Baltic region, showing higher than previously expected diversity of the Porkuni Stage and distinctness of reef-related brachiopods in the shallow shelf environment. The new species are not present in the Hirnantia brachiopod fauna in deeper-water environments of the Central East Baltic.

  9. Nutrient allocations and metabolism in two Collembola with contrasting reproduction and growth strategies

    DEFF Research Database (Denmark)

    Larsen, Thomas; Ventura, Marc; Damgaard, Christian;

    2009-01-01

    1.  Physiological mechanisms such as allocation and release of nutrients are keys to understanding an animal's adaptation to a particular habitat. This study investigated how two detrivores with contrasting life-history traits allocated carbon (C) and nitrogen (N) to growth, reproduction and meta......1.  Physiological mechanisms such as allocation and release of nutrients are keys to understanding an animal's adaptation to a particular habitat. This study investigated how two detrivores with contrasting life-history traits allocated carbon (C) and nitrogen (N) to growth, reproduction...... in tissue, growth and reproduction for 28 days. In addition, we measured the composition of C, N and phosphorus (P) to gain complementary information on the stoichiometry underlying life-history traits and nutrient allocation. 3.  For P. minuta, the smallest and most fecund of the two species, the tissue...... budgets and life-history traits in small invertebrates such as Collembola....

  10. Dicty_cDB: Contig-U05501-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available c0... 40 1.0 2 ( GC696613 ) Sequence 11857 from patent US 6812339. 46 1.1 1 ( AL357127 ) Human...e GM_WBc0028K1... 30 9.4 6 ( GC700442 ) Sequence 15687 from patent US 6812339. 38 9.5 3 ( AC226709 ) Oryza minuta clo...e... 44 4.2 1 ( EA690864 ) Sequence 69743 from patent US 7365185. 44 4.2 1 ( EA625507 ) Sequence 4386 from patent...ts) S1: 12 (24.3 bits) S2: 14 (28.2 bits) dna update 2009. 7.28 Homology vs DNA Query= Contig-U05501-1 (Co...9( CP001324 |pid:none) Micromonas sp. RCC299 chromosome... 52 5e-06 BT003919_1( BT003919 |pid:none) Arabidopsis thaliana clo

  11. Lutte contre les nématodes a galles : test de différents engrais verts nématicides : compte-rendu d'essai 2005

    OpenAIRE

    Védie, Hélène; Geffroy, Thomas; Lambion, Jérôme

    2006-01-01

    Différents engrais verts sont réputés pour leur propriétés nématicides. Le GRAB a étudié plusieurs espèces : crotalaires (en partenariat avec l'IRD de Montpellier), Tagetes patula et minuta, Mucuna, dont l’efficacité se heurte souvent à des problèmes de réalisation technique, notamment de concurrence avec les adventices. L’objectif du présent essai est d’évaluer : - la faisabilité de nouvelles espèces d’engrais verts sélectionnées dans la bibliographie. Il s’agit de voir si les espèces ret...

  12. Water-clover ferns, Marsilea, in the Southeastern United States

    Science.gov (United States)

    Jacono, Colette C.; Johnson, David M.

    2006-01-01

    A surge in the collection of exotic Marsilea, M. mutica, M. minuta and M. hirsuta in the southeastern United States has prompted the need for updated identification aids. This study provides an annotated key to all water-clover ferns occurring in the region. It describes and illustrates recently documented exotic species and a previously misidentified western introduction. It details the rediscovery of M. ancylopoda, presumed extinct, and confirms its identification as the western species M. oligospora. Finally it clarifies the status and distribution of two additional western North American species introduced to the southeast, M. vestita and M. macropoda.

  13. Sanitary profile in mice and rat colonies in laboratory animal houses in Minas Gerais: I - Endo and ectoparasites Perfil sanitário de colônias de camundongos e ratos de biotérios de Minas Gerais: I - Endo e ectoparasitos

    Directory of Open Access Journals (Sweden)

    K.A. Bicalho

    2007-12-01

    Full Text Available The sanitary conditions of 13 animal houses in nine public institutions in Minas Gerais, and the presence of endo and ectoparasites of mice and rats colonies kept in these facilities were evaluated. Data about barriers to prevent the transmission of diseases and a program of sanitary monitoring were obtained through a questionnaire and local visit. Parasitological methods were performed for diagnosing mite, lice, helminthes, and protozoa parasites in 344 mice and 111 rats. Data have shown that the majority of the animal houses had neither proper physical environment nor protection barriers to prevent the transmission of infections. Parasitological results have shown that only one animal house (7.7% had parasite free animals, whereas the others have presented infected animals and the prevalences of parasites in the mice colonies were: Myobia musculi (23.1%; Myocoptes musculinus (38.5%; Radfordia affinis (15.4%; Syphacia obvelata (92.3%; Aspiculuris tetraptera (23.1%; Hymenolepis nana (15.4%; Spironucleus muris (46.2%; Giardia muris (46.2%; Tritrichomonas muris (53.8%; Trichomonas minuta (61.5%; Hexamastix muris (7.7%; and Entamoeba muris (84.6%. As for the rat colonies, the prevalences were: Poliplax spinulosa (8.1%; Syphacia muris (46.2%; Trichosomoides crassicauda (28.6%; Spironucleus muris (85.7%; Tritrichomonas muris (85.7%; Trichomonas minuta (85.7%; Hexamastix muris (14.3% and Entamoeba muris (85.7%.Avaliaram-se as condições sanitárias de 13 biotérios de nove instituições públicas do estado de Minas Gerais, bem como a presença de endo e ectoparasitos nos camundongos e ratos criados nesses biotérios. Os dados sobre barreiras contra infecções e sobre o programa de monitoramento sanitário dos animais foram obtidos por meio de um questionário e de visitas aos biotérios. Métodos parasitológicos foram utilizados para o diagnóstico de ácaros, piolhos, helmintos e protozoários em 344 camundongos e 111 ratos. A maioria dos biot

  14. Weed management: a case study from north-west Pakistan

    International Nuclear Information System (INIS)

    Alien and exotic plant invasions are threatening the floral diversity around the globe and affect ecological processes. Weed invasion has been documented in North-West Pakistan. A total of 16 weeds were reported as invasive. These were Xanthium strumarium, Ipomoea eriocarpa, Alternanthera pungens, Trianthema portulacastrum, Tagetes minuta, Imperata cylindrica, Amaranthus hybridus subsp. hybridus, Robinia pseudo-acacia, Broussonetia papyrifera, Ailanthus altissima, Pistia stratiotes, Phragmites australis, Parthenium hysterophorus, Cannabis sativa, Galium aparine and Emex spinosus. Among these Robinia pseudo-acacia, Broussonetia papyrifera and Ailanthus altissima are trees and were purposely introduced as they later became invasive. They were aggressive in nature and replaced or suppressed the local vegetation. Their distribution, history of invasion and management has been discussed here. The behaviour and association of the 36 problem weeds with different crops has also been outlined as they perspired from the farmers. (author)

  15. Descriptions of two new species of Quasithelazia Maplestone, 1932 (Spirurida: Acuariidae) and a redescription of Alinema sturni Jögis, 1968 from birds in Australia.

    Science.gov (United States)

    Mutafchiev, Yasen

    2016-07-01

    Quasithelazia minuta n. sp. and Quasithelazia pearsoni n. sp. (Spirurida: Acuariidae) are described from Todiramphus sanctus (Vigors & Horsfield) (Coraciiformes: Alcedinidae) in Australia. Alinema sturni Jögis, 1968 from Sturnus vulgaris (L.) (Passeriformes: Sturnidae) in Europe, is considered to belong in the subfamily Schistorophinae Travassos, 1918 (and not in the Seuratiinae Chitwood & Wehr, 1932, where it has previously been placed) on the basis of the number of the pairs of precloacal papillae. The latter species, known from its original record only, is found as parasitic in diverse passerine birds in Australia, namely Psophodes olivaceus (Latham) (Psophodidae), Falcunculus frontatus (Latham) (Pachycephalidae), Colluricincla harmonica (Latham) (Pachycephalidae), Malurus cyaneus (Ellis) (Maluridae) and Ptilotula penicillata (Gould) (Meliphagidae). Alinema sturni is considered an alien species for Australia that has been introduced with its host (starling) and subsequently adapted to a wide range of native avian hosts.

  16. UTJECAJ HRANIDBENIH TRETMANA NA KVALITATIVNA SVOJSTVA MIŠIĆNOG TKIVA PILIĆA

    OpenAIRE

    Đurkin, Ivona; Kušec, Goran; Kralik, Gordana; Gajčević, Zlata; Maltar, Zlata

    2008-01-01

    Istraživanje je provedeno na 28 muških Ross 308 hibrida pilića podijeljenih u četiri hranidbena tretmana u trajanju od šest tjedana. U cilju istraživanja utjecaja hranidbenih tretmana na kvalitativna svojstva mišićnog tkiva, pilići su hranjeni smjesom u koju je dodano 3% sojinog ulja (kontrolna skupina), 3% lanenog ulja (skupina P1), 2,9% lanenog ulja + 0,1% PBE1 (skupina P2) te 2,9% lanenog ulja + 0,1% PBE2 (skupina P3). Pilići su žrtvovani u dobi od 42 dana te su 45 minuta post mortem na pr...

  17. Effect of Prudhoe crude oil on carbon assimilation by planktonic algae in an arctic pond

    Energy Technology Data Exchange (ETDEWEB)

    Miller, M.C.; Hater, G.R.; Vestal, J.R.

    1975-01-01

    During the summer of 1975, 240ml/m of Prudhoe crude oil was spilled on an experimental coastal pond similar to those around Prudhoe Bay. Deviaton of algal production, algal biomass and species composition was compared to an adjacent control pond. Planktonic primary productivity was initially inhibited but recovered. Algal density did not deviate in the two ponds; however, the biomass and the species composition was changed, by the elimination of the Cryptophyte Rhodomonas minuta. The time course of the effects was related to the weathering and degradation of the oil. On these ponds the effects on the phytoplankton were not significantly different than those observed in 1970 after a controlled spill at 45 times the 1975 dose rate.

  18. WELDING METHOD

    Science.gov (United States)

    Cornell, A.A.; Dunbar, J.V.; Ruffner, J.H.

    1959-09-29

    A semi-automatic method is described for the weld joining of pipes and fittings which utilizes the inert gasshielded consumable electrode electric arc welding technique, comprising laying down the root pass at a first peripheral velocity and thereafter laying down the filler passes over the root pass necessary to complete the weld by revolving the pipes and fittings at a second peripheral velocity different from the first peripheral velocity, maintaining the welding head in a fixed position as to the specific direction of revolution, while the longitudinal axis of the welding head is disposed angularly in the direction of revolution at amounts between twenty minutas and about four degrees from the first position.

  19. ANTIBACTERIAL ACTIVITY KINETICS OF MEDICINAL PLANTS EXTRACTS AGAINST CINÉTICA DA ATIVIDADE ANTIBACTERIANA IN VITRO DE EXTRATOS NATURAIS FRENTE A MICRORGANISMOS RELACIONADOS À MASTITE BOVINA

    Directory of Open Access Journals (Sweden)

    Letícia De Toni

    2008-04-01

    Full Text Available The subject of this paper is to test antimicrobials activities by medicinal plants extracts against more important contagious bovine mastitis pathogens. Disinfectants solutions was made from Baccharis trimera (Less D.C., Compositae (Asteracea, Eucalyptus spp Labill., Myrtaceae e Tagetes minuta (Linn., Compositae (Asteracea plants by hidroalcoholic extraction (EHA or decoction (DEC. S. aureus, S. agalactiae, and P. aeruginosa were used. To test for in vitro efficacy, each solution disinfectant was mixed with bacterial suspension containing 105 CFU.mL-1, by 30 seconds, two, 10 ant 30 minutes, with and without 20% of integral milk. Viable bacteria were evaluated by directed plating of neutralized aliquots. The worked included chlorhexidine 0,18% by control and it was executed in duplicate. EHA Eucalytpus spp and EHA T. minuta were as effective as control chlorhexidine against S. aureus. This solutions plus EHA B. trimera, were as effective as control against S. agalactiae. DEC Eucalyptus and DEC B. trimera also inactivated S. agalactiae in more prolongated time. Chlorhexidine was the best against P. multocida in milk absence, although the EHA were effective at ten or thirty minutes. All solutions, inclusive control, it was sensibility to organic load. The observations from the in vitro studies presented here need to be substantiated by in vivo studies by to confirm the potentiality use of plants medicinal extracts as disinfectants/antisepsis in livestock health. O presente trabalho busca avaliar a cinética da atividade antimicrobiana de extratos de plantas medicinais frente a bactérias relacionadas com mastite bovina. Para tal, foram produzidas soluções desinfetantes a partir de folhas e talos de Baccharis trimera (Less D.C., Compositae (Asteraceae, Eucalyptus spp Labill., Myrtaceae e Tagetes minuta (Linn., Compositae (Asteraceae, através de extração hidroalcoólica (EHA e decocto (DEC. Os microrganismos utilizados foram S. aureus, S

  20. Antibacterial activity of water extracts and essential oils of various aromatic plants against Paenibacillus larvae, the causative agent of American Foulbrood.

    Science.gov (United States)

    González, M J; Marioli, J M

    2010-07-01

    Vegetal water extracts, namely the water remaining after hydro-distillation and decoctions, and essential oils of 10 plant species were tested as inhibitors for the growth of Paenibacillus larvae, the causative agent of American Foulbrood. Achyrocline satureioides, Chenopodium ambrosioide, Eucalyptus cinerea, Gnaphalium gaudichaudianum, Lippia turbinata, Marrubium vulgare,Minthostachys verticillata, Origanum vulgare, Tagetes minuta and Thymus vulgaris were included in the study. The water remaining after hydro-distillation showed the highest antibacterial activities, the growth of almost all the P. larvae strains tested was inhibited by these extracts. Regarding the plants tested, E. cinerea and M. verticillata were the plant species with the highest biological activity with 100% efficacy (all its extracts inhibited the growth of all P. larvae strains). Essential oils were less active for the inhibition of P. larvae growth. PMID:20398671

  1. First Record of the Mysids, Genus Erythrops (Crustacea: Mysida: Mysidae from Korea

    Directory of Open Access Journals (Sweden)

    Mijin Kim

    2012-04-01

    Full Text Available The tribe Erythropini Hansen, 1910 belonging to the subfamily Mysinae Haworth, 1825, is one of the peculiar groups mainly found in the pelagic or deep sea. Of these, the genus Erythrops G.O. Sars, 1869 including two mysids, Erythrops minuta Hansen, 1910 and Erythrops nana W. Tattersall, 1922, is reported for the first time from Korea. The genus is easily distinguished from other genera by the antennal scale with a terminal strong spine, the carpus of third to eighth thoracopods divided into the propodus by an oblique articulation, and the trapezial telson. The morphological descriptions and the illustrations of these species are given with photographs. As a result of this study, 49 species of mysids including these two species are now recorded in the Korean fauna.

  2. Mosquito repellent activity of essential oils of aromatic plants growing in Argentina.

    Science.gov (United States)

    Gillij, Y G; Gleiser, R M; Zygadlo, J A

    2008-05-01

    Mosquitoes are important vectors of diseases and nuisance pests. Repellents minimize contact with mosquitoes. Repellents based on essential oils (EO) are being developed as an alternative to DEET (N,N-diethyl-m-methylbenzamide), an effective compound that has disadvantages including toxic reactions, and damage to plastic and synthetic fabric. This work evaluated the repellency against Aedes aegypti of EO from aromatic plants that grow in Argentina: Acantholippia seriphioides, Achyrocline satureioides, Aloysia citriodora, Anemia tomentosa, Baccharis spartioides, Chenopodium ambrosioides, Eucalyptus saligna, Hyptis mutabilis, Minthostachys mollis, Rosmarinus officinalis, Tagetes minuta and Tagetes pusilla. Most EO were effective. Variations depending on geographic origin of the plant were detected. At a 90% EO concentration, A. satureoides and T. pusilla were the least repellent. At concentrations of 12.5% B. spartioides, R. officinalis and A. citriodora showed the longest repellency times. Comparisons of the principal components of each EO suggest that limonene and camphor were the main components responsible for the repellent effects. PMID:17583499

  3. RICERCHE DI STATISTICA METEOROLOGICA

    Directory of Open Access Journals (Sweden)

    EZIO ROSINI

    1956-06-01

    Full Text Available statistica
    non ha goduto di buona stampa nel passato anche recente; particolarmente
    poco apprezzata è stata la statistica meteorologica e climatologica.
    Occorre riconoscere che tale atteggiamento era almeno in
    parte frutto di un preconcetto errato sul significato della statistica, ma
    che d'altra parte la natura dei lavori di tal genere che venivano alla
    luce sembrava a volte confermare la giustezza del preconcetto. Il fatto
    è che una parte degli studiosi di meteorologia avvertiva più di altri,
    probabilmente per la propria stessa costituzione mentale, l'astrattezza
    dei metodi fisico-matematici applicati alla grandiosa e al tempo stesso
    minuta complessità dei fenomeni meteorologici, sentendo dunque maggiormente
    la necessità di far costante ricorso alla realtà delle osservazioni
    effettivamente eseguite.

  4. DNA sequence analysis suggests that cytb-nd1 PCR-RFLP may not be applicable to sandfly species identification throughout the Mediterranean region.

    Science.gov (United States)

    Llanes-Acevedo, Ivonne Pamela; Arcones, Carolina; Gálvez, Rosa; Martin, Oihane; Checa, Rocío; Montoya, Ana; Chicharro, Carmen; Cruz, Susana; Miró, Guadalupe; Cruz, Israel

    2016-03-01

    Molecular methods are increasingly used for both species identification of sandflies and assessment of their population structure. In general, they are based on DNA sequence analysis of targets previously amplified by PCR. However, this approach requires access to DNA sequence facilities, and in some circumstances, it is time-consuming. Though DNA sequencing provides the most reliable information, other downstream PCR applications are explored to assist in species identification. Thus, it has been recently proposed that the amplification of a DNA region encompassing partially both the cytochrome-B (cytb) and the NADH dehydrogenase 1 (nd1) genes followed by RFLP analysis with the restriction enzyme Ase I allows the rapid identification of the most prevalent species of phlebotomine sandflies in the Mediterranean region. In order to confirm the suitability of this method, we collected, processed, and molecularly analyzed a total of 155 sandflies belonging to four species including Phlebotomus ariasi, P. papatasi, P. perniciosus, and Sergentomyia minuta from different regions in Spain. This data set was completed with DNA sequences available at the GenBank for species prevalent in the Mediterranean basin and the Middle East. Additionally, DNA sequences from 13 different phlebotomine species (P. ariasi, P. balcanicus, P. caucasicus, P. chabaudi, P. chadlii, P. longicuspis, P. neglectus, P. papatasi, P. perfiliewi, P. perniciosus, P. riouxi, P. sergenti, and S. minuta), from 19 countries, were added to the data set. Overall, our molecular data revealed that this PCR-RFLP method does not provide a unique and specific profile for each phlebotomine species tested. Intraspecific variability and similar RFLP patterns were frequently observed among the species tested. Our data suggest that this method may not be applicable throughout the Mediterranean region as previously proposed. Other molecular approaches like DNA barcoding or phylogenetic analyses would allow a more

  5. Effect of night time-intervals, height of traps and lunar phases on sand fly collection in a highly endemic area for canine leishmaniasis.

    Science.gov (United States)

    Gaglio, Gabriella; Brianti, Emanuele; Napoli, Ettore; Falsone, Luigi; Dantas-Torres, Filipe; Tarallo, Viviana D; Otranto, Domenico; Giannetto, Salvatore

    2014-05-01

    The activity of phlebotomine sand flies was monitored in a sub-urban area of Sicily in order to acquire data on seasonality and to elucidate the effect of the night time-intervals, height of traps from ground and lunar phases on the abundance of the capture. The study was conducted in the farm of the University of Messina (Italy). Light traps were placed as in the following: biweekly, from dusk to dawn, and from May to November; for three consecutive nights from 18:00 to 6:00, with the net bag being changed every 2h; for 30 days, at different heights from 18:00 to 6:00. A total of five species (i.e., Phlebotomus perniciosus, Phlebotomus neglectus, Phlebotomus sergenti, Phlebotomus perfiliewi, and Sergentomyia minuta), three of which are proven vectors of Leishmania infantum, were captured. The most abundant species was P. perniciosus (73.3%) followed by S. minuta (23.3%). The highest number of phlebotomine sand flies was collected in August and September with a peak of collection recorded in the evening (i.e., from 20:01 to 22.00). The number of phlebotomine sand flies collected at 50cm above the ground was significantly higher (P=0.041) than that captured at 150cm. Results of this study shed light on the ecology of main phlebotomine species in the Mediterranean area, and on the influence of some factors, such as time and height of traps, on the light trap capture efficiency.

  6. New xenophytes from Gran Canaria (Canary Islands, Spain, with emphasis on naturalized and (potentially invasive species

    Directory of Open Access Journals (Sweden)

    Verloove, F.

    2013-12-01

    Full Text Available Trabajos recientes de campo en Gran Canaria han facilitado el descubrimiento de nuevas localidades para plantas vasculares no nativas. Agave attenuata, Antigonon leptopus, Atriplex nummularia, Cascabela thevetia, Cenchrus echinatus, Cuscuta campestris, Diplachne fusca subsp. uninervia, Diplotaxis tenuifolia, Dysphania anthelmintica (hasta ahora confundida con D. ambrosioides, Eclipta prostrata, Euphorbia pulcherrima, Fagopyrum esculentum, Gossypium barbadense, Lablab purpureus, Lemna minuta, Opuntia leucotricha, Passiflora edulis, Pennisetum glaucum, Phaseolus acutifolius, Pluchea carolinensis, Prosopis juliflora, Salvia microphylla, Schinus terebinthifolius, Senna spectabilis, Solanum chrysotrichum, Tecoma stans, Tipuana tipu, Urochloa mutica, U. plantaginea y Washingtonia se citan por primera vez para las Islas Canarias, mientras que Alopecurus myosuroides, Amaranthus blitoides, Bothriochloa ischaemum var. songarica, Cardamine flexuosa subsp. debilis, Heliotropium curassavicum, Leonotis nepetifolia, Medicago lupulina, Parkinsonia aculeata, Physalis peruviana, Phytolacca americana y Turnera ulmifolia son nuevas para la flora de la isla de Gran Canaria. Finalmente, se confirma la presencia de Paspalum vaginatum, P. distichum y Cortaderia selloana en Gran Canaria.Trabajos recientes de campo en Gran Canaria han facilitado el descubrimiento de nuevas localidades para plantas vasculares no nativas. Agave attenuata, Antigonon leptopus, Atriplex nummularia, Cascabela thevetia, Cenchrus echinatus, Cuscuta campestris, Diplachne fusca subsp. uninervia, Diplotaxis tenuifolia, Dysphania anthelmintica (hasta ahora confundida con D. ambrosioides, Eclipta prostrata, Euphorbia pulcherrima, Fagopyrum esculentum, Gossypium barbadense, Lablab purpureus, Lemna minuta, Opuntia leucotricha, Passiflora edulis, Pennisetum glaucum, Phaseolus acutifolius, Pluchea carolinensis, Prosopis juliflora, Salvia microphylla, Schinus terebinthifolius, Senna spectabilis, Solanum

  7. The role of mass spectrometry in medicinal plant research.

    Science.gov (United States)

    Héthelyi, E; Tétényi, P; Dabi, E; Dános, B

    1987-11-01

    In phytochemical and chemotaxonomic research work mass spectrometry plays an outstandingly important role. Using gas chromatography/mass spectrometry (GC/MS) we established the chemotaxa of Tanacetum vulgare L. Chemotypes with essential oils containing 60-90% of artemisia ketone, carveol, dihydrocarvone, myrtenol, umbellulone, terpinen-4-ol, davanone, and Tagetes species containing various essential oils can be clearly distinguished by their spectra; we examined many variations of Tagetes erecta, T. lucida, T. minuta, T. patula and T. tenuifolia. We have identified alpha-beta-pinene-, 1,8-cineol-, linalool-, camphor-, nerol-, geraniol- and gamma-gurjonene as components of Achillea distans L. Injecting the essential oil direct from the oil-secreting organs of T. minuta plants we identified using GC/MS 6-10 and 16% eugenol from the involucral bract and hypsophyll, respectively, as well as beta-ocimene, dihydrotagetone, tagetone, Z- and E-ocimenones. In the course of studies on essential fatty acids Borago officinalis and Lappula squarrosa were selected from 70 species of the family Boraginaceae to obtain seed oil as a source of gamma-linolenic acid, and for the PG synthesis we isolated several grams of gamma-linolenic acid, as well as C18:4, i.e. octadecatetraenic acid, from L. squarrosa on the basis of the mass spectra. From the seed oil of Aquilegia vulgaris C18:3 (5) from the oil of Limnanthes dougloasii C20:1 (5) and from the seed oils of Delphinium consolida and of Tropaeolum species (T. majus, T. minus, T. peregrinum) C20:1 (11) fatty acids were identified on the basis of spectra. PMID:2962668

  8. Phytochemical characterization of several hawthorn (Crataegus spp. species sampled from the Eastern Mediterranean region of Turkey

    Directory of Open Access Journals (Sweden)

    Oguzhan Çaliskan

    2012-01-01

    Full Text Available Background: We evaluated the total phenolic content, antioxidant capacity as well as antioxidant activity of five Crataegus species (A1, A2, Y1, Y2, Y4 accessions of Crataegus aronia var. aronia; B2, B3, B5, B6, B7, B9, Y5 accessions of C. aronia var. dentata; B10 accession of C. aronia var. minuta; Y3 accession of Crataegus orientalis var. orientalis and A3 accession of Crataegus monogyna subsp. azarella. Materials and Methods: Antioxidant activity and total phenolic content of fruits were determined by β-carotene bleaching and Folin-Ciocalteu assays. Antioxidant capacity was determined by using 2,2-diphenyl-1-picrylhydrazyl (DPPH assay. Results: C. monogyna subsp. azarella had the highest total phenol, antioxidant activity and antioxidant capacity of 55.2 mg gallic acid equivalents (GAE/g dry weight (DW, 81.9% and 31.2%, respectively. C. aronia var. aronia was found to have the lowest total phenolic content (35.7 mg GAE/g DW. The antioxidant activities of fruit extracts increased in the order of C. orientalis var. orientalis < C. aronia var. minuta < C. aronia var. dentata < C. aronia var. aronia < C. monogyna subsp. azarella according to β-carotene/linoleic acid assay. In recent years, C. aronia var. dentata has gained importance as a commercial species in this region. B3 and B7 accessions had fruit weight more than 14 g, and considerable total phenol content, antioxidant activity and antioxidant capacity. Conclusion: This investigation shows the potential value of hawthorn fruit species as a good source of natural antioxidants and that consumption of hawthorn fruit or its products may contribute substantial amounts of antioxidants to the diet.

  9. JENUFA GEN. NOV.: A NEW GENUS OF COCCOID GREEN ALGAE (CHLOROPHYCEAE, INCERTAE SEDIS) PREVIOUSLY RECORDED BY ENVIRONMENTAL SEQUENCING(1).

    Science.gov (United States)

    Němcová, Yvonne; Eliáš, Marek; Škaloud, Pavel; Hodač, Ladislav; Neustupa, Jiří

    2011-08-01

    The diversity of eukaryotic microorganisms is far from fully described, as indicated by the vast number of unassigned genotypes retrieved by environmental sequencing or metagenomics. We isolated several strains of unicellular green algae from algal biofilms growing on tree bark in a Southeast Asian tropical rainforest and determined them to be relatives of an unidentified lineage of environmental 18S rDNA sequences, thus uncovering its cellular identity. Light, confocal, and electron microscope observations and sequencing the 18S rRNA gene revealed that the strains represent two different species within an apparently new genus, described here as Jenufa gen. nov. Both species formed minute coccoid cells with an irregular globular outline, a smooth cell wall, and a single parietal chloroplast without a pyrenoid. The two species, described herein as J. perforata and J. minuta, differed in chloroplast morphology and cell wall structure. Phylogenetic analyses of 18S rRNA gene sequences showed a firm relationship between the two species and placed the Jenufa lineage in an unresolved position within the CS clade (Chlamydomonadales + Sphaeropleales) of the class Chlorophyceae, although possible affinities to the genus Golenkinia were suggested both by maximum-likelihood (ML) and Bayesian methods. Furthermore, two almost identical environmental 18S rDNA sequences from an endolithic microbial community occurring in dolomite rock in the central Alps turned out to be specifically related to, yet apparently distinct from, the sequence of J. minuta, indicating the existence of an undescribed Jenufa species occurring in the temperate zone. PMID:27020027

  10. Flora planctónica de laguna Lagartos, Quintana Roo Planktonic flora from Lagartos Lagoon, Quintana Roo

    Directory of Open Access Journals (Sweden)

    Viridiana Margarita Nava-Ruiz

    2012-09-01

    Full Text Available Se presenta una lista de la flora planctónica de la laguna Lagartos, basada en la observación de muestras superficiales obtenidas entre noviembre de 2007 a septiembre de 2008. Las muestras se recolectaron con una botella Van Dorn de 2 litros en la parte central de la laguna; se registraron 67 taxa: 28 Bacillariophyta, 22 Cyanoprokaryota, 7 Chlorophyta, 6 Dinoflagellata, 2 Euglenophyta y 2 Cryptophyta. Las cianofitas dominaron durante todo el periodo de estudio, con una contribución mayor al 80% de la abundancia total del fitoplancton. Son nuevos registros para México 13 especies: Chroococcus pulcherrimus, Coelosphaerium confertum, Cyanodyction iac, Phormidium pachydermaticum, Planktolyngbya contorta, Rhodomonas minuta, Amphidinium massartii, Ensiculifera cf. loeblichii, Heterocapsa cf. pseudotriquetra, Prorocentrum cassubicum, Licmophora normaniana, Fistulifera saprophila y Amphora richardiana. Todos los taxa listados se ilustran con microfotografías.The planktonic flora from Lagartos Lagoon, Quintana Roo, was examined based on the observation of samples collected from November 2007 to September 2008. The superficial samples were collected with a Van Dorn bottle of 2 L, in the core part of the lagoon. A total of 67 taxa were identified: 28 Bacillariophyta, 22 Cyanoprokaryota, 7 Chlorophyta, 6 Dinoflagellata, 2 Euglenophyta and 2 Cryptophyta. Nevertheless, the blue green algae dominated during all study period, with more of 80% to the total abundance of the phytoplankton. The species Chroococcus pulcherrimus, Coelosphaerium confertum, Cyanodyction iac, Phormidium pachydermaticum, Planktolyngbya contorta, Rhodomonas minuta, Amphidinium massartii, Ensiculifera cf. loeblichii, Heterocapsa cf. pseudotriquetra, Prorocentrum cassubicum, Licmophora normaniana, Fistulifera saprophila and Amphora richardiana were recorded for the first time in Mexico. All the taxa are illustrated with microphotographs.

  11. Avaliação in vitro da atividade antifúngica de extratos de plantas e óleo de eucalipto sobre Trichophyton mentagrophytes In vitro evaluation of the antifungal activity of plant extracts and eucalyptus oil on Trichophyton mentagrophytes

    Directory of Open Access Journals (Sweden)

    D.F.R. Frias

    2009-01-01

    Full Text Available O presente estudo teve como objetivo determinar a ação antifúngica de extratos de plantas medicinais e óleo de eucalipto frente ao dermatófito Trichophyton mentagropytes, visando a utilização da fitoterapia no controle. As plantas utilizadas na obtenção dos extratos foram arruda (Ruta graveolens, citronela (Cymbopogon nardus, cravo de defunto (Tagetes minuta, eucalipto (Eucalyptus spp, graviola (Annona muricata, fruta do conde (Annona spp, manga (Mangifera indica, romã (Punica granatum, flores e folhas de primavera (Bougainvillea spectabilis. Verificou-se que uso de 0,5% óleo de eucalipto no combate ao T. mentagropytes foi eficaz, já os extratos de citronela (4% eucalipto (5% e romã (8% atuaram como fungistáticos e os restantes não devem ser usados contra este dermatófito porque não causaram nenhum efeito.The aim of this study was to assess the antifungal action of medicinal plant extracts and eucalyptus oil against the dermatophyte Trichophyton mentagrophytes in order to employ phytotherapy for its control. The plants used for extract production were common rue (Ruta graveolens, citronella (Cymbopogon nardus, wild marigold (Tagetes minuta, eucalyptus (Eucalyptus spp, sweetsop (Annona muricata, custard apple (Annona spp, mango (Mangifera indica, pomegranate (Punica granatum, besides flowers and leaves of bougainvillea (Bougainvillea spectabilis. The use of 0.5% eucalyptus oil was effective in controlling Trichophyton mentagrophytes; however, citronella (4%, eucalyptus (5% and pomegranate (8% extracts acted as fungistatic, and the remaining extracts should not be used against this dermatophyte since they did not have any effect.

  12. HOW DO WE IDENTIFY MICRONYCTERIS (SCHIZONYCETRIS SANBORNI SIMMONS, 1996 (CHIROPTERA, PHYLLOSTOMIDAE RELIABLY AND WHERE WE CAN FIND THIS SPECIES IN BRAZIL?

    Directory of Open Access Journals (Sweden)

    ANDERSON FEIJÓ

    2015-01-01

    Full Text Available Micronycteris is divided into four subgenera, Micronycteris, Leuconycteris, Xenoctenes, and Schizonycteris. The latter includes Micronycteris (Schizonycteris minuta, Micronycteris (S. schmidtorum, Micronycteris (S. sanborni and Micronycteris (S. yatesi. Little is known of the biology of M. (S. sanborni, which is widely distributed in the dry forests of South America, but is known from only few sites. The scarcity of records of M. sanborni appears to be at least partly related to the difficulty of differentiating this species from the other members of the subgenus Schizonycteris. The present study identifies the key traits that distinguish this species from other Schizonycteris, reviews the geographic distribution of the species, and presents some notes on breeding patterns. Six new localities are presented for M. sanborni, and are analyzed together with those available in the literature, providing new insights into ecological and zoogeographic patterns. A number of the diagnostic features established by Simmons (1996 in the description of M. sanborni proved to have little taxonomic value, especially for the differentiation of M. minuta and M. yatesi, which it closely resembles. The primary external difference is the pure white color of the ventral pelage and the proportion of the white base (2/3-4/5 of the dorsal hair in M. sanborni, in contrast with dirty white or pale gray and a much shorter white base of the dorsal hair in the other species. A number of cranial traits are also important. The distributional data now indicate that M. sanborni occurs mainly in mesic and open areas, including disturbed habitats, in the Caatinga scrublands and the Cerrado savannas of northeastern Brazil, especially in areas with rocky outcrops. Micronycteris sanborni appears to be monoestrous, with births coinciding with the rainy season.

  13. Uncultivated microbial eukaryotic diversity: a method to link ssu rRNA gene sequences with morphology.

    Science.gov (United States)

    Hirst, Marissa B; Kita, Kelley N; Dawson, Scott C

    2011-01-01

    Protists have traditionally been identified by cultivation and classified taxonomically based on their cellular morphologies and behavior. In the past decade, however, many novel protist taxa have been identified using cultivation independent ssu rRNA sequence surveys. New rRNA "phylotypes" from uncultivated eukaryotes have no connection to the wealth of prior morphological descriptions of protists. To link phylogenetically informative sequences with taxonomically informative morphological descriptions, we demonstrate several methods for combining whole cell rRNA-targeted fluorescent in situ hybridization (FISH) with cytoskeletal or organellar immunostaining. Either eukaryote or ciliate-specific ssu rRNA probes were combined with an anti-α-tubulin antibody or phalloidin, a common actin stain, to define cytoskeletal features of uncultivated protists in several environmental samples. The eukaryote ssu rRNA probe was also combined with Mitotracker® or a hydrogenosomal-specific anti-Hsp70 antibody to localize mitochondria and hydrogenosomes, respectively, in uncultivated protists from different environments. Using rRNA probes in combination with immunostaining, we linked ssu rRNA phylotypes with microtubule structure to describe flagellate and ciliate morphology in three diverse environments, and linked Naegleria spp. to their amoeboid morphology using actin staining in hay infusion samples. We also linked uncultivated ciliates to morphologically similar Colpoda-like ciliates using tubulin immunostaining with a ciliate-specific rRNA probe. Combining rRNA-targeted FISH with cytoskeletal immunostaining or stains targeting specific organelles provides a fast, efficient, high throughput method for linking genetic sequences with morphological features in uncultivated protists. When linked to phylotype, morphological descriptions of protists can both complement and vet the increasing number of sequences from uncultivated protists, including those of novel lineages

  14. Morphology of non-sensory epithelium during post-natal development of the rabbit vomeronasal organ.

    Science.gov (United States)

    Elgayar, S A M; Eltony, S A; Othman, M A

    2014-08-01

    The vomeronasal organ (VNO), because of its ability to detect pheromones, has an important role in many social and sexual behaviours in mammals. It also mediates defensive behaviours through detection of protein pheromone homologues. A detailed morphological description of the post-natal development of the 'non-sensory' epithelium (NSE) of the female rabbit is recorded. Histological techniques were used to study the NSE of the VNO in post-natal development of female rabbits. The study focused on the following post-natal ages: newborn, 1 week, 2 weeks and 1 month (five animals each) beside to two adult animals. The rabbit VNO was surrounded externally by bony capsule and internally by cartilaginous capsule. NSE was pseudostratified columnar partially ciliated epithelium without goblet cells. In addition to basal cells, NSE contained ciliated and three types of non-ciliated columnar cells (dark, pale and light). At birth, dark cells may have primary cilia. By 1 month, the cytoplasm became lighter with less free ribosomes. The pale cells had electron-lucent cytoplasm, which contained a few organelles. Mitotic figures were observed in basal and columnar cells, particularly during the first 2 weeks of post-natal development. Light columnar cells were common during the first week. Numerous leucocytes and a few nerve endings were detected intra-epithelial. Scanning electron microscope revealed a gradual increase in height of microvilli of non-ciliated cells. Ciliated cells had cilia and microvilli. Cells were arranged singly, in clumps or in a dense population of cells. The rabbit VNO-NSE had a unique morphological structure. PMID:23931650

  15. Functional morphology of the olfactory organ of the tongue sole, Cynoglossus semilaevis

    Science.gov (United States)

    Ma, Aijun; Wang, Xin'an

    2010-03-01

    The morphology and structure of the olfactory organ of Cynoglossus semilaevis Günther are described. The oval olfactory sacs on both sides differ in size and in the number of lamellae, with those on the abocular side having smaller sacs and fewer lamellae than those on the ocular side. On the ocular side, the average ratio of sac length to eye diameter is 2.1 (i.e.>1) with an average of 91 lamellae, while on the abocular side, the values were 1.7 (i.e.>1) and 69, respectively. In addition, the surface morphology varies in different parts of the lamella. The frontal part, near the anterior nostril, is a non-sensory margin with cilia-free epidermal cells. Within this is an internal ciliated sensory area, which is intercalated with ciliated receptor cells and a few ciliated non-sensory cells. Additionally, some dense ciliated non-sensory cells make up a non-sensory area, which also contains cilia-free epidermal cells distributed in patches. In the rear of the olfactory sac near the posterior nostril, the lamellae differ in morphology from those of the frontal olfactory sac but are similar in having few ciliated receptor cells. In other words, the surface of the lamellae in the rear part of the olfactory sac is mainly non-sensory. At present, four types of lamellae (I, II, III and IV) have been recognized in relation to the pattern of the sensory epithelium. In this study, the frontal and rear lamellae resembled types I and IV, respectively, but are referred to as types I' and IV' because they are slightly less developed. Data on the ratio of length of lamellae to eye diameter, number of lamellae and the type of surface pattern of the lamellae show that the development of the olfactory system of C. semilaevis facilitates prey capture.

  16. The V-ATPase accessory protein Atp6ap1b mediates dorsal forerunner cell proliferation and left-right asymmetry in zebrafish.

    Science.gov (United States)

    Gokey, Jason J; Dasgupta, Agnik; Amack, Jeffrey D

    2015-11-01

    Asymmetric fluid flows generated by motile cilia in a transient 'organ of asymmetry' are involved in establishing the left-right (LR) body axis during embryonic development. The vacuolar-type H(+)-ATPase (V-ATPase) proton pump has been identified as an early factor in the LR pathway that functions prior to cilia, but the role(s) for V-ATPase activity are not fully understood. In the zebrafish embryo, the V-ATPase accessory protein Atp6ap1b is maternally supplied and expressed in dorsal forerunner cells (DFCs) that give rise to the ciliated organ of asymmetry called Kupffer's vesicle (KV). V-ATPase accessory proteins modulate V-ATPase activity, but little is known about their functions in development. We investigated Atp6ap1b and V-ATPase in KV development using morpholinos, mutants and pharmacological inhibitors. Depletion of both maternal and zygotic atp6ap1b expression reduced KV organ size, altered cilia length and disrupted LR patterning of the embryo. Defects in other ciliated structures-neuromasts and olfactory placodes-suggested a broad role for Atp6ap1b during development of ciliated organs. V-ATPase inhibitor treatments reduced KV size and identified a window of development in which V-ATPase activity is required for proper LR asymmetry. Interfering with Atp6ap1b or V-ATPase function reduced the rate of DFC proliferation, which resulted in fewer ciliated cells incorporating into the KV organ. Analyses of pH and subcellular V-ATPase localizations suggested Atp6ap1b functions to localize the V-ATPase to the plasma membrane where it regulates proton flux and cytoplasmic pH. These results uncover a new role for the V-ATPase accessory protein Atp6ap1b in early development to maintain the proliferation rate of precursor cells needed to construct a ciliated KV organ capable of generating LR asymmetry.

  17. Phylogenetic relationships within the genus Aspidisca (Protozoa, Ciliophora, Euplotida) revealed by ITS1-5.8S-ITS2 region sequences

    Science.gov (United States)

    Huang, Jie; Yi, Zhenzhen; Miao, Miao; Al-Rasheid, Khaled A. S.; Song, Weibo

    2011-03-01

    The internal transcribed spacer regions (ITS1 and ITS2) and 5.8S rRNA genes were sequenced in six populations of four Aspidisca species, namely A. leptaspis, A. orthopogon, A. magna and A. aculeata. Phylogenetic trees were constructed by means of Bayesian inference (BI), Maximum Parsimony (MP), Neighbor-Joining (NJ), and Maximum Likelihood (ML) to assess the inter- and intra-species relationships within the genus Aspidisca. All trees show similar topologies with stable supports and indicate that: (1) four well known groups, i.e., Oligotrichia, Stichotrichia, Choreotrichia and Hypotrichia, are distinctly outlined within the class Spirotrichea, and all are monophyletic other than Hypotrichia; (2) members of Aspidisca can be distinguished well, based on the ITS1-5.8S-ITS2 region sequences, and A. leptaspis and A. magna shared a closer relationship than other species; (3) Aspidisca and Euplotes branch early in the subclass Hypotrichia. To compare the phylogenetic relationships based on different genes, SSU rRNA trees were also constructed with nearly the same species inclusion, which revealed different topologies of inter-species, inter-genera and inter-subclasses.

  18. Phylogenetic relationships within the genus Aspidisca (Protozoa, Ciliophora, Euplotida) revealed by ITS1-5.8S-ITS2 region sequences

    Institute of Scientific and Technical Information of China (English)

    HUANG Jie; YI Zhenzhen; MIAO Miao; AL-RASHEID; Khaled A.S.; SONG Weibo

    2011-01-01

    The internal transcribed spacer regions (ITS1 and ITS2) and 5.8S rRNA genes were sequenced in six populations of four Aspidisca species, namely A. leptaspis, A. orthopogon, A. magna and A. aculeata. Phylogenetic trees were constructed by means of Bayesian inference (BI), Maximum Parsimony (MP), Neighbor-Joining (NJ), and Maximum Likelihood (ML) to assess the inter- and intra-species relationships within the genus Aspidisca. All trees show similar topologies with stable supports and indicate that: (1) four well known groups, i.e., Oligotrichia, Stichotrichia, Choreotrichia and Hypotrichia, are distinctly outlined within the class Spirotrichea, and all are monophyletic other than Hypotrichia; (2) members of Aspidisca can be distinguished well, based on the ITS1-5.8S-ITS2region sequences, and A. leptaspis and A. magna shared a closer relationship than other species; (3)Aspidisca and Euplotes branch early in the subclass Hypotrichia. To compare the phylogenetic relationships based on different genes, SSU rRNA trees were also constructed with nearly the same species inclusion, which revealed different topologies of inter-species, inter-genera and inter-subclasses.

  19. Unravelling the interactions among microbial populations found in activated sludge during biofilm formation.

    Science.gov (United States)

    Liébana, Raquel; Arregui, Lucía; Santos, Antonio; Murciano, Antonio; Marquina, Domingo; Serrano, Susana

    2016-09-01

    Microorganisms colonize surfaces and develop biofilms through interactions that are not yet thoroughly understood, with important implications for water and wastewater systems. This study investigated the interactions between N-acyl homoserine lactone (AHL)-producing bacteria, yeasts and protists, and their contribution to biofilm development. Sixty-one bacterial strains were isolated from activated sludge and screened for AHL production, with Aeromonas sp. found to be the dominant AHL producer. Shewanella xiamenensis, Aeromonas allosaccharophila, Acinetobacter junii and Pseudomonas aeruginosa recorded the highest adherence capabilities, with S. xiamenensis being the most effective in surface colonization. Additionally, highly significant interactions (i.e. synergic or antagonistic) were described for dual and multistrain mixtures of bacterial strains (P. aeruginosa, S. xiamenensis, A. junii and Pseudomonas stutzeri), as well as for strongly adherent bacteria co-cultured with yeasts. In this last case, the adhered biomass in co-cultures was lower than the monospecific biofilms of bacteria and yeast, with biofilm observations by microscopy suggesting that bacteria had an antagonist effect on the whole or part of the yeast population. Finally, protist predation by Euplotes sp. and Paramecium sp. on Aeromonas hydrophila biofilms not only failed to reduce biofilm formation, but also recorded unexpected results leading to the development of aggregates of high density and complexity. PMID:27306553

  20. Software for Preprocessing Data from Rocket-Engine Tests

    Science.gov (United States)

    Cheng, Chiu-Fu

    2004-01-01

    Three computer programs have been written to preprocess digitized outputs of sensors during rocket-engine tests at Stennis Space Center (SSC). The programs apply exclusively to the SSC E test-stand complex and utilize the SSC file format. The programs are the following: Engineering Units Generator (EUGEN) converts sensor-output-measurement data to engineering units. The inputs to EUGEN are raw binary test-data files, which include the voltage data, a list identifying the data channels, and time codes. EUGEN effects conversion by use of a file that contains calibration coefficients for each channel. QUICKLOOK enables immediate viewing of a few selected channels of data, in contradistinction to viewing only after post-test processing (which can take 30 minutes to several hours depending on the number of channels and other test parameters) of data from all channels. QUICKLOOK converts the selected data into a form in which they can be plotted in engineering units by use of Winplot (a free graphing program written by Rick Paris). EUPLOT provides a quick means for looking at data files generated by EUGEN without the necessity of relying on the PV-WAVE based plotting software.

  1. 水稻孕穗期茎注射野生稻DNA变异株系的RAPD分析%RAPD Analysis of New Rice Strains Developed through the Method of Spike-Stalk-Injecting DNA from Wild Relative

    Institute of Scientific and Technical Information of China (English)

    赵炳然; 贾建航; 阳和华; 李传友; 詹庆才; 王斌; 周坤炉; 袁隆平

    2000-01-01

    Utlization of favorable genes from wild rice is a promising way for rice super highyield breeding.Transferring those genes into cultivars is the first and key step.Total DNA of O.minuta(2n=48)was isolated and injected into the spike-stalks of V20B(an elite maintainer line of hybrid rice)during suitable period.Variants were found in the first generation.From thesevariants new maintainer line have been developed. RAPD analysis with 83 Opron primers wasperformed among Minghui 63 (control) 、 O. minuta (donor) 、V20B(recipient)、97C-77 (a strain of the 7th generation from a variant)、 98C-107 and 98C-165 (two strains of the 9 th generationfrom sister strains of 97C-77). Products of each primer were detected to have polymorphismbetween V20B and O. minuta. Products of 15 primers are different between 97C-77 and O.minuta, but not in V20B and Minghui 63. Only 2 of them have polymorphism among 98C-107、98C-165 and 97C-77, the others are identical. These results indicated that the method of injecting wild-rice DNA into cultivars spikestalk was an effective method to transfer favorablegenes from distant relatives besides gene engineering method and interspecific cross method aided by embryo rescue.%利用野生稻有利基因是培育超高产栽培稻(Oryza sativa L,2n=24AA染色体组型)的主要技术路线之一。本研究通过穗茎注射法将小粒野生稻O.minuta(2n=4x=48,BBCC染色体组型)总DNA导人杂交稻当家亲本V20B,获得了变异株的3个高世代株系;用RAPD方法对上述3个株系、供、受体及对照品种明恢63共6个材料进行了多态性研究分析。所用83个Operon引物均在小粒野生稻与V20B间扩增出多态性产物,二者相似系数仅为26.7%,而明恢63与V20B二者的相似系数达90.5%。83个引物中有15个引物在变异株第7代株系97C-77与受体V20B间扩增出的产物存在差异,差异带共有26条,占83个引物在V20B中扩增出的带数397的6.6

  2. The kinase regulator mob1 acts as a patterning protein for stentor morphogenesis.

    Directory of Open Access Journals (Sweden)

    Mark M Slabodnick

    2014-05-01

    Full Text Available Morphogenesis and pattern formation are vital processes in any organism, whether unicellular or multicellular. But in contrast to the developmental biology of plants and animals, the principles of morphogenesis and pattern formation in single cells remain largely unknown. Although all cells develop patterns, they are most obvious in ciliates; hence, we have turned to a classical unicellular model system, the giant ciliate Stentor coeruleus. Here we show that the RNA interference (RNAi machinery is conserved in Stentor. Using RNAi, we identify the kinase coactivator Mob1--with conserved functions in cell division and morphogenesis from plants to humans-as an asymmetrically localized patterning protein required for global patterning during development and regeneration in Stentor. Our studies reopen the door for Stentor as a model regeneration system.

  3. Eukaryotic and prokaryotic microbial communities during microalgal biomass production.

    Science.gov (United States)

    Lakaniemi, Aino-Maija; Hulatt, Chris J; Wakeman, Kathryn D; Thomas, David N; Puhakka, Jaakko A

    2012-11-01

    Eukaryotic and bacterial communities were characterized and quantified in microalgal photobioreactor cultures of freshwater Chlorella vulgaris and marine Dunaliella tertiolecta. The microalgae exhibited good growth, whilst both cultures contained diverse bacterial communities. Both cultures included Proteobacteria and Bacteroidetes, while C. vulgaris cultures also contained Actinobacteria. The bacterial genera present in the cultures were different due to different growth medium salinities and possibly different extracellular products. Bacterial community profiles were relatively stable in D. tertiolecta cultures but not in C. vulgaris cultures likely due to presence of ciliates (Colpoda sp.) in the latter. The presence of ciliates did not, however, cause decrease in total number of C. vulgaris or bacteria during 14 days of cultivation. Quantitative PCR (qPCR) reliably showed relative microalgal and bacterial cell numbers in the batch cultures with stable microbial communities, but was not effective when bacterial communities varied. Raw culture samples were successfully used as qPCR templates. PMID:22995170

  4. Role of food uptake for photosynthesis, growth and survival of the mixotrophic dinoflagellate Dinophysis acuminata

    DEFF Research Database (Denmark)

    Riisgaard, Karen; Hansen, Per Juel

    2009-01-01

    . Apart from the importance of prey concentration, data revealed that ingestion and growth of D. acuminata are, to a certain degree, dependent on the growth rate of its ciliate prey. Photosynthesis was studied in a culture of D. acuminata, initially grown at prey saturation (>1000 M. rubrum cells ml-1......Dinophysis acuminata is a mixotrophic dinoflagellate frequently causing diarrhetic shellfish poisoning. D. acuminata was isolated from Danish coastal waters and cultivated using the mixotrophic ciliate Mesodinium rubrum as prey. The roles of food uptake and photosynthesis for the growth...... and survival of D. acuminata were studied. The observed maximum growth rate was ca. 0.45 d-1 at an irradiance of 100 µmol photons m-2 s-1 when supplied with well-fed M. rubrum at concentrations >1000 M. rubrum ml-1. The corresponding ingestion rate per D. acuminata was about 9 M. rubrum d-1, or 3200 pg C d-1...

  5. Combining O2 Microsensors and Fiber-Optic Technology to Measure Photo-Physiological Responses of Symbiodinium

    DEFF Research Database (Denmark)

    Ulstrup, Karin Elizabeth; Kühl, Michael; Ralph, Peter;

    parallel measurements of gross photosynthesis rate and photosystem II quantum yield at the coral surface under steady-state conditions as a function of increasing irradiances. The studies showed large plasticity in photophysiological acclimation of Symbiodinium linked to light microclimate as well...... as motility (in the case of the ciliate) and Symbiodinium genotype (in the case of A. valida). In case i) and iii) there was nonlinearity between relative electron transport rate (rETR) and gross photosynthesis measurements at moderate to high irradiances possibly due to vertical heterogeneity...... to case i) and iii) the symbionts produced relatively high gross photosynthesis rate and rETR at moderate to high irradiance due to greater efficiency of light absorption caused by a higher density of symbionts in the ciliate....

  6. Respiratory implantation cyst of the mandible following orthognathic surgery

    Directory of Open Access Journals (Sweden)

    Ragsdale Bruce

    2009-01-01

    Full Text Available A cyst following implantation of respiratory epithelium during surgical procedures has been documented only rarely. A variety of names have been attached to this lesion: respiratory mucocele, respiratory implantation cyst, surgical ciliated cyst, and surgical (implantation cyst. In seven prior case reports, the interval between the initiating surgical procedure and diagnostic biopsy of the resultant well-circumscribed radiolucency and histopathological demonstration of distinctive pseudostratified ciliated columnar epithelial lining has varied from 4 to 40 years. In the case reported here, chin augmentation used "residual maxillary bone" as the donor tissue and likely transplanted sinonasal mucosa into the mandible during orthognathic surgery, resulting in a painful anterior mandibular cyst lined by respiratory epithelium that was ablated 16 years later.

  7. Protozoan Fauna and Abundance in Aeration Tanks of Three Municipal Wastewater Treatment Plants in the Eastern Cape Province of South Africa

    Science.gov (United States)

    Sibewu, M.; Momba, M. N. B.; Okoh, A. L.

    This study focuses on the assessment of the protozoan fauna and abundance in the mixed liquors of aeration tanks of the three municipal wastewater treatment plants located in Fort Beaufort, Dimbaza and East London in the Eastern Cape Province of South Africa and their implication to the production of effluents of good quality. The samples were collected between September and December 2005 and protozoa species were identified by direct microscopic observations at x400 magnification by comparison with existing protozoa gallery collections. A total of 68 protozoan genera made up of 44 ciliates, 16 flagellates and 8 others were identified in wastewater treatment plants. Although in all aerobic zones the average density of ciliates was 104 cells mL-1, which indicated that these plants were able to produce clear effluent of good quality, a better performance was found in Dimbaza and East London, which had total protozoan genera of 27 and 26, respectively.

  8. Two new species of Coecobrya (Collembola, Entomobryidae from China, with an updated key to the Chinese species of the genus

    Directory of Open Access Journals (Sweden)

    Guo-Liang Xu

    2015-04-01

    Full Text Available Two new Coecobrya species, which were newly collected in 2014, are described from China. Coecobrya sanmingensis sp. n. from southeast China (Fujian is the fourth 1+1 eyed species in the genus; it can be distinguished from other three species by the ciliate chaetae X and X2-4 on the ventral side of head, the abundant chaetae on the trochanteral organ, a large outer tooth on the unguiculus, the absence of smooth manubrial chaetae, and the dorsal chaetotaxy. Coecobrya qinae sp. n. from southwest China (Yunnan is characterized by paddle-like S-chaetae of Ant. III organ, ciliate chaetae X, X2 and X4 posterior to labium, medial macrochaetae on the mesothorax, and 5+5 central and 2+2 lateral macrochaetae on the fourth abdominal segment. An updated key to the Chinese species of Coecobrya is given.

  9. Pulmonary Balantidium coli infection in a leukemic patient.

    Science.gov (United States)

    Anargyrou, K; Petrikkos, G L; Suller, M T E; Skiada, A; Siakantaris, M P; Osuntoyinbo, R T; Pangalis, G; Vaiopoulos, G

    2003-07-01

    A 59-year-old woman suffering from chronic lymphocytic leukemia developed pulmonary lesions; bronchoalveolar lavage was performed for possible systemic fungal infection. However, direct microscopic analysis revealed ciliated protozoa identified as Balantidium coli. B. coli is the only known pathogenic ciliate, and is usually associated with intestinal infection in areas associated with pig rearing. On very rare occasions the organisms may invade extra-intestinal organs, in this case the lungs of an immunocompromised patient. This case is unusual as balantidiasis is rare in Europe, the patient had no obvious contact with pigs, and there was no history of diarrhea prior to pulmonary colonization. Metronidazole was rapidly administered, and the condition improved after 24-48 hr. PMID:12827655

  10. Dysenteric syndrome due to Balantidium coli: a case report.

    Science.gov (United States)

    Bellanger, Anne-Pauline; Scherer, Emeline; Cazorla, Arnault; Grenouillet, Frederic

    2013-04-01

    A 28-year-old man was hospitalized for a dysenteric syndrome that had developed during the previous days. Physical examination revealed abdominal pains, fever, vomiting and more than ten liquid stools per day. Fresh stool examination showed numerous mobile ciliated trophozoites of Balantidium coli. The patient reported having been on a hike the previous weekend during which he had drunk water through a hydration pouch bladder. Complete resolution was observed after intravenous rehydration and ten days of oral treatment with metronidazole (Flagyl®). Balantidium coli is the largest ciliate protozoan able to infect humans. This parasite is common in pigs and has a worldwide distribution. Human infections, a rare event in industrialised countries, are usually acquired by ingestion of food or water contaminated by mammal faeces. Human B. coli infections are easily treated but may be severe and even fatal if neglected. PMID:23686128

  11. Foregut duplication cysts:A report of two cases with emphasis on embryogenesis

    Institute of Scientific and Technical Information of China (English)

    Thaer Khoury; Louis Rivera

    2011-01-01

    Duplication cyst of the stomach with a pseudostratified columnar ciliated epithelium is extremely rare.We describe two cases of these cysts,with emphasis on their immunophenotype and embryogenesis.The first patient was a 29-year-old man who presented with cramping abdominal pain in his left lower quadrant.The second patient was a 26-year-old woman who had a history,over several years,of chronic epigastric abdominal pain radiating to her back.Both lesions were surgically removed.They showed the same histomorphology.The cysts were lined by a pseudostratified respiratory epithelium with ciliated cells.The first cyst was connected to the stomach,while the second cyst was not connected.Both cysts expressed thyroid transcription factor-1 (TTF-1)and surfactant.In this report,we explore the possible embryogenesis of these lesions in the light of TTF-1 and surfactant expression.

  12. Diagnosis of foregut and tailgut cysts by endosonographically guided fine-needle aspiration.

    Science.gov (United States)

    Hall, Diane A; Pu, Robert T; Pang, Yijun

    2007-01-01

    Foregut, hindgut, and tailgut cysts are uncommon developmental anomalies. Clinical and radiological diagnosis can present many challenges, especially in adult patients or when the lesions are in unique locations. Thus, diagnosis has traditionally been provided upon surgical resection. We describe the diagnoses of a gastric foregut cyst and a retrorectal tailgut cyst by endosonographically guided fine-needle aspiration in two adults. The common cytologic features of the specimens are ciliated epithelial cells, proteinaceous material with degenerated debris, histiocytes, and benign appearing epithelium of squamous and/or gastrointestinal type that lack cytologic atypia. The identification of ciliated columnar cells is the key finding. Cytologic diagnosis via endosonographically guided fine-needle aspiration of foregut/hindgut cyst is accurate and less traumatic than surgical biopsies. PMID:17173292

  13. Study on the actives sludge present in the La Golondrina's WWTP; Caracterizacion del fango activo presente en el tratamiento biologico de la EDAR de La Golondrina

    Energy Technology Data Exchange (ETDEWEB)

    Marin Galvin, R.; Rojas Moreno, J.

    2010-07-01

    Active sludge on the La Golondrina's WWTP (Emacsa-Cordoba) showed an average of total recount of 15x10{sup 6} ind/ml. The majority functional group present in the sludge was that of the Sessile Ciliates (70% over total). Thiothrix was the dominant filamentous organisms detected while were almost detected Sphaerotilus natans, Microthrix and the 1863 Type. the increase of temperature of water was linked to a higher values of the total recount as well as with the presence of Rizopodon. In this way, the higher exploitation yielding were obtained with values of the total recount between 7 and 20 x 10{sup 6} ind/ml and Sessile Ciliates amount higher than 60%. Finally, filamentous organisms are well controlled by the anaerobic selection system installed in the plant, which operates with values of SVI of 75 ml (average). (Author) 12 refs.

  14. Different Cell Types In the Lower Respiratory Tract of the Reindeer (Rangifer tarandus tarandus L. - A Transmission Electron Microscopical Study

    Directory of Open Access Journals (Sweden)

    Seppo A.m. Saari

    1997-02-01

    Full Text Available The epithelium of the trachea and distal airways of 12 healthy adult reindeer were studied with transmission electron microscopy. The ultrastructure of the reindeer respiratory tract corresponded to the findings of previous investigators studying other mammalian species. The epithelium of the trachea and bronchi, down to the level of the distal bronchioli, was composed of three main types of cell: ciliated, goblet, and basal. In the distal brochioli, non-ciliated cells similar to those known as Clara cells were predominant. Numerous electron-dense granules and the cell organelle pattern resembled the Clara cell type observed in laboratory rodents, rabbit, sheep, pig, horse, and llama. Pneumocyte 1 and pneumocyte 2 cells were readily identified in the alveoli. The pneumocyte 2 cells possessed short microvilli and granules with lamellar content. Micropinocytotic vesicles were very numerous in the alveolar wall, and a small number of alveolar macrophages occasionally seen in the alveolar lumen.

  15. Stimulation of aquaporin-5 and transepithelial water permeability in human airway epithelium by hyperosmotic stress

    DEFF Research Database (Denmark)

    Pedersen, Peter Steen; Braunstein, Thomas Hartig; Jørgensen, Anders;

    2006-01-01

    Osmotic water permeability (P(f )) was measured in spheroid-shaped human nasal airway epithelial explants pre-exposed to increasing levels of hyperosmotic stress. The fluid-filled spheroids, derived from nasal polyps, were lined by a single cell layer with the ciliated apical cell membrane facing......-CF spheroids and were not significantly influenced by hyperosmotic stress. The results suggest that hyperosmotic stress is an important activator of AQP-5 in human airway epithelium, leading to significantly increased transepithelial water permeability.......Osmotic water permeability (P(f )) was measured in spheroid-shaped human nasal airway epithelial explants pre-exposed to increasing levels of hyperosmotic stress. The fluid-filled spheroids, derived from nasal polyps, were lined by a single cell layer with the ciliated apical cell membrane facing...

  16. Cilioprotists as biological indicators for estimating the efficiency of using Gravel Bed Hydroponics System in domestic wastewater treatment.

    Science.gov (United States)

    El-Serehy, Hamed A; Bahgat, Magdy M; Al-Rasheid, Khaled; Al-Misned, Fahad; Mortuza, Golam; Shafik, Hesham

    2014-07-01

    Interest has increased over the last several years in using different methods for treating sewage. The rapid population growth in developing countries (Egypt, for example, with a population of more than 87 millions) has created significant sewage disposal problems. There is therefore a growing need for sewage treatment solutions with low energy requirements and using indigenous materials and skills. Gravel Bed Hydroponics (GBH) as a constructed wetland system for sewage treatment has been proved effective for sewage treatment in several Egyptian villages. The system provided an excellent environment for a wide range of species of ciliates (23 species) and these organisms were potentially very useful as biological indicators for various saprobic conditions. Moreover, the ciliates provided excellent means for estimating the efficiency of the system for sewage purification. Results affirmed the ability of this system to produce high quality effluent with sufficient microbial reduction to enable the production of irrigation quality water.

  17. Phenotypic modification of human airway epithelial cells in air-liquid interface culture induced by exposure to the tobacco-specific nitrosamine 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK).

    Science.gov (United States)

    Carson, Johnny L; Brighton, Luisa E; Jaspers, Ilona

    2015-04-01

    The nitrosamine 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK) is a potent tobacco-specific carcinogen. We used an air-liquid interface epithelial cell culture system to model changes associated with NNK exposure relative to pathologies documented in human tobacco-related illnesses. Although in vitro systems exhibit certain limitations, they often offer accentuation of subtle pathologies. While the distribution of cell types in control cultures typically favors the ciliated cell phenotype, NNK-exposed cultures transitioned to non-ciliated cell phenotypes as well as reflecting features consistent with squamous metaplasia. We conclude that NNK impacts normal growth and differentiation of human airway epithelium in a short interval of time in vitro.

  18. In Vivo NMR Metabolic Profiling of Fabrea salina Reveals Sequential Defense Mechanisms against Ultraviolet Radiation

    OpenAIRE

    Marangoni, Roberto; Paris, Debora; Melck, Dominique; Fulgentini, Lorenzo; Colombetti, Giuliano; Motta, Andrea

    2011-01-01

    Fabrea salina is a hypersaline ciliate that is known to be among the strongest ultraviolet (UV)-resistant microorganisms; however, the molecular mechanisms of this resistance are almost unknown. By means of in vivo NMR spectroscopy, we determined the metabolic profile of living F. salina cells exposed to visible light and to polychromatic UV-B + UV-A + Vis radiation for several different exposure times. We used unsupervised pattern-recognition analysis to compare these profiles and discovered...

  19. Environmental colour affects aspects of single-species population dynamics.

    OpenAIRE

    Petchey, O L

    2000-01-01

    Single-species populations of ciliates (Colpidium and Paramecium) experienced constant temperature or white or reddened temperature fluctuations in aquatic microcosms in order to test three hypotheses about how environmental colour influences population dynamics. (i) Models predict that the colour of population dynamics is tinged by the colour of the environmental variability. However, environmental colour had no effect on the colour of population dynamics. All population dynamics in this exp...

  20. Metaplastic changes of nasal respiratory epithelium in rats exposed to hexamethylphosphoramide (HMPA) by inhalation.

    OpenAIRE

    K. P. Lee(University of Tokyo); Trochimowicz, H. J.

    1982-01-01

    Rats exposed by inhalation to hexamethylphosphoramide (HMPA) at concentrations of 50, 100, 400, and 4000 parts per billion (ppb) for 6-24 months revealed nasal tumors and squamous metaplasia with inflammation in the nasal epithelium, but no changes were observed at 10 ppb. The ciliated cells were most susceptible to HMPA, showing degenerative changes, with abnormal cilia and extensive deciliation. The desquamated nasal epithelium was repaired initially by undifferentiated mucus or microvillou...