WorldWideScience

Sample records for chlorophyll-a fluorescence parameters

  1. [Monitoring of the Moskva River Water Using Microbiological Parameters and Chlorophyll a Fluorescence].

    Science.gov (United States)

    Mosharova, I V; Il'inskii, V V; Matorin, D N; Mosharov, S A; Akulova, A Yu; Protopopov, F F

    2015-01-01

    The results of investigations of three Moskva River sites with different degree of pollution using a complex of microbiological characteristics and the parameters of chlorophyll a fluorescence are presented. We determined that the bacterioplankton seasonal dynamics at less polluted waters (Tushino and Vorobyovy Gory) were similar and differed significantly from one in more polluted waters (Dzerzhinskii). The number of bacteria with active electron transport chain, as well as their share in the bacterioplankton structure, was higher in the water of Dzerzhinskii (average annual values of 0.23 x 10(6) cells/mL and 14%), that in the less polluted water of Tushino and Vorobyovy Gory (0.14 x 10(6) cells/mL; 6% and 0.15 x 10(6) cells/mL; 7%, respectively). From April to October, the content of chlorophyll a and its photosynthetic activity were the highest in Tushino. In Dzerzhinskii, during spring the increase in photosynthetic activity commenced earlier and was more intensive that the increase in chlorophyll a content, i.e., the increase in phytoplankton biomass was temporarily suppressed. We suggest association of this phenomenon with suppression of organic matter synthesis by phytoplankton due to the high water pollution in Dzerzhinskii. The second autumn peak of chlorophyll a content, that was typical of clear water and was observed in Tushino, did not occur in Dzerzhinskii. We recommend combined application of these microbiological parameters and characteristics of chlorophyll a fluorescence for a monitoring.

  2. Quantitative genetic analysis of chlorophyll a fluorescence parameters in maize in the field environments

    Institute of Scientific and Technical Information of China (English)

    Domagojimi; Hrvoje Lepedu; Vlatka Jurkovi; Jasenka Antunovi; Vera Cesar

    2014-01-01

    Chlorophyl fluorescence transient from initial to maximum fluorescence (“P”step) throughout two intermedi-ate steps (“J”and“I”) (JIP-test) is considered a reliable early quantitative indicator of stress in plants. The JIP-test is particularly useful for crop plants when applied in variable field environments. The aim of the present study was to conduct a quantitative trait loci (QTL) analysis for nine JIP-test parameters in maize during flowering in four field environ-ments differing in weather conditions. QTL analysis and identification of putative candidate genes might help to explain the genetic relationship between photosynthesis and different field scenarios in maize plants. The JIP-test param-eters were analyzed in the intermated B73 ? Mo17 (IBM) maize population of 205 recombinant inbred lines. A set of 2,178 molecular markers across the whole maize genome was used for QTL analysis revealing 10 significant QTLs for seven JIP-test parameters, of which five were co-localized when combined over the four environments indicating polygenic inheritance and pleiotropy. Our results demonstrate that QTL analysis of chlorophyl fluorescence parameters was capable of detecting one pleiotropic locus on chromosome 7, coinciding with the gene gst23 that may be associated with efficient photosynthe-sis under different field scenarios.

  3. Chlorophyll a fluorescence analysis in forests

    OpenAIRE

    M. Pollastrini; Holland, V; Brüggemann, W.; F. Bussotti

    2016-01-01

    A European-wide assessment of chlorophyll a fluorescence (ChlF, prompt fluorescence on dark-adapted samples) parameters in forest ecosystems was carried out in the years 2012-2013, within the 7FP FunDivEUROPE project. A total of 1596 trees growing in 209 stands distributed in six countries, from Mediterranean to boreal sites, were sampled. This paper shows the applicability of the ChlF in forest ecology surveys, the protocols adopted for leaf sampling and ChlF measurements, the variability of...

  4. CHLOROPHYLL a FLUORESCENCE ANALYSIS IN FORESTS

    OpenAIRE

    M. Pollastrini; Holland, V; Brüggemann, W.; F. Bussotti

    2016-01-01

    A European-wide assessment of chlorophyll a fluorescence (ChlF, prompt fluorescence on dark-adapted samples) parameters in forest ecosystems was carried out in the years 2012-2013, within the 7FP FunDivEUROPE project. A total of 1596 trees growing in 209 stands distributed in six countries, from Mediterranean to boreal sites, were sampled. This paper shows the applicability of the ChlF in forest ecology surveys, the protocols adopted for leaf sampling and ChlF measurements, the variability of...

  5. CHLOROPHYLL a FLUORESCENCE ANALYSIS IN FORESTS

    Directory of Open Access Journals (Sweden)

    M. Pollastrini

    2016-03-01

    Full Text Available A European-wide assessment of chlorophyll a fluorescence (ChlF, prompt fluorescence on dark-adapted samples parameters in forest ecosystems was carried out in the years 2012-2013, within the 7FP FunDivEUROPE project. A total of 1596 trees growing in 209 stands distributed in six countries, from Mediterranean to boreal sites, were sampled. This paper shows the applicability of the ChlF in forest ecology surveys, the protocols adopted for leaf sampling and ChlF measurements, the variability of the ChlF parameters within and between trees, their dependence to environmental factors and the relationships with other functional leaf traits. The most relevant findings were as follows: (i The least variable ChlF parameter within and between the trees was the maximum quantum yield of primary photochemistry (FV/FM, whereas the performance indices (PIABS and PITOT showed the highest variability; (ii for a given tree, the ChlF parameters measured at two heights of the crown (top and bottom leaves were correlated and, in coniferous species, the ChlF parameters were correlated between different needle age classes (from the current year and previous year; (iii the ChlF parameters showed a geographical pattern, and the photochemical performance of the forest trees was higher in central Europe than in the edge sites (northernmost and southernmost; and (iv ChlF parameters showed different sensitivity to specific environmental factors: FV/FM increased with the increase of the leaf area index of stands and soil fertility; ΔVIP was reduced under high temperature and drought. The photochemical responses of forest tree species, analyzed with ChlF parameters, were influenced by the ecology of the trees (i.e. their functional groups, continental distribution, successional status, etc., tree species’ richness and composition of the stands. Our results support the applicability and usefulness of the ChlF in forest monitoring investigations on a large spatial scale and

  6. Effects of ambient versus reduced UV-B radiation on high arctic Salix arctica assessed by measurements and calculations of chlorophyll-a fluorescence parameters from fluorescence transients

    DEFF Research Database (Denmark)

    Albert, Kristian Rost

    2005-01-01

    cross-section of leaf sample, the number of active PSII reaction centres (RC/ CSM) and electron transport rate (ETM/CSM) and all performance indexes (PIABS, PICSo and PICSm) were increased in reduced UV-B. The total soluble flavonoid content was highest in ambient UV-B. The treatment effects......A UV-B exclusion-experiment was conducted in the high arctic Zackenberg, NE Greenland, in which Salix arctica leaves during most of the growing season were fixed perpendicular to the solar zenith angle, thereby receiving maximal solar radiation. Covered with Teflon and Mylar foil, the leaves...... received approximately 90 and 40% of the ambient UV-B irradiance, respectively. The effects were examined through recordings of chlorophyll a fluorescence transients, determination of biomass and analysis of total carbon and nitrogen content and amount of soluble flavonoids in the leaves. The processing...

  7. Modulated Chlorophyll "a" Fluorescence: A Tool for Teaching Photosynthesis

    Science.gov (United States)

    Marques da Silva, Jorge; Bernardes da Silva, Anabela; Padua, Mario

    2007-01-01

    "In vivo" chlorophyll "a" fluorescence is a key technique in photosynthesis research. The recent release of a low cost, commercial, modulated fluorometer enables this powerful technology to be used in education. Modulated chlorophyll a fluorescence measurement "in vivo" is here proposed as a tool to demonstrate basic…

  8. Modulated Chlorophyll "a" Fluorescence: A Tool for Teaching Photosynthesis

    Science.gov (United States)

    Marques da Silva, Jorge; Bernardes da Silva, Anabela; Padua, Mario

    2007-01-01

    "In vivo" chlorophyll "a" fluorescence is a key technique in photosynthesis research. The recent release of a low cost, commercial, modulated fluorometer enables this powerful technology to be used in education. Modulated chlorophyll a fluorescence measurement "in vivo" is here proposed as a tool to demonstrate basic photosynthesis phenomena to…

  9. Detection of Fluorescence from Single Chlorophyll a Molecules Absorbed on Glass Surface

    Institute of Scientific and Technical Information of China (English)

    JI Dong-Mei; HUANG Zheng-Xi; XIA An-Dong

    2005-01-01

    @@ We investigate the single molecule spectroscopy of chlorophyll a molecules on glass surface in N2-saturated environment. The basic photodynamic parameters of chlorophyll a molecules, such as fluorescence lifetime,survival time before photobleaching, on-time, and off-time, are reported. A four-level model is employed to describe the possible dynamics and photobleaching of chlorophyll a upon excitation. Broad distributions in fluorescence lifetimes and survival times are mainly due to the heterogeneities of both molecular conformation and local environment.

  10. Chlorophyll a fluorescence to phenotype wheat genotypes for heat tolerance

    DEFF Research Database (Denmark)

    Sharma, Dew Kumari; Andersen, Sven Bode; Ottosen, Carl-Otto

    In prospects of global climate change, heat stress is a rising constraint for the productivity of wheat (Triticum aestivum L.). It is a heat-susceptible crop beyond 17-23oC temperature throughout its phenological stages, flowering phase being the most sensitive stage. Chlorophyll a fluorescence...... for 72h was appropriate to induce genotype dependent variation in Fv/Fm. This standardized protocol was used to phenotype wheat genotypes until the variation in the genotypes was consistently high with increased heritability for the trait, Fv/Fm. Mass screening of 1273 wheat genotypes in a milder stress...

  11. Algal photosynthetic responses to toxic metals and herbicides assessed by chlorophyll a fluorescence.

    Science.gov (United States)

    Kumar, K Suresh; Dahms, Hans-Uwe; Lee, Jae-Seong; Kim, Hyung Chul; Lee, Won Chan; Shin, Kyung-Hoon

    2014-06-01

    Chlorophyll a fluorescence is established as a rapid, non-intrusive technique to monitor photosynthetic performance of plants and algae, as well as to analyze their protective responses. Apart from its utility in determining the physiological status of photosynthesizers in the natural environment, chlorophyll a fluorescence-based methods are applied in ecophysiological and toxicological studies to examine the effect of environmental changes and pollutants on plants and algae (microalgae and seaweeds). Pollutants or environmental changes cause alteration of the photosynthetic capacity which could be evaluated by fluorescence kinetics. Hence, evaluating key fluorescence parameters and assessing photosynthetic performances would provide an insight regarding the probable causes of changes in photosynthetic performances. This technique quintessentially provides non-invasive determination of changes in the photosynthetic apparatus prior to the appearance of visible damage. It is reliable, economically feasible, time-saving, highly sensitive, versatile, accurate, non-invasive and portable; thereby comprising an excellent alternative for detecting pollution. The present review demonstrates the applicability of chlorophyll a fluorescence in determining photochemical responses of algae exposed to environmental toxicants (such as toxic metals and herbicides).

  12. Modeling chlorophyll a fluorescence transient: relation to photosynthesis.

    Science.gov (United States)

    Stirbet, A; Riznichenko, G Yu; Rubin, A B; Govindjee

    2014-04-01

    To honor Academician Alexander Abramovitch Krasnovsky, we present here an educational review on the relation of chlorophyll a fluorescence transient to various processes in photosynthesis. The initial event in oxygenic photosynthesis is light absorption by chlorophylls (Chls), carotenoids, and, in some cases, phycobilins; these pigments form the antenna. Most of the energy is transferred to reaction centers where it is used for charge separation. The small part of energy that is not used in photochemistry is dissipated as heat or re-emitted as fluorescence. When a photosynthetic sample is transferred from dark to light, Chl a fluorescence (ChlF) intensity shows characteristic changes in time called fluorescence transient, the OJIPSMT transient, where O (the origin) is for the first measured minimum fluorescence level; J and I for intermediate inflections; P for peak; S for semi-steady state level; M for maximum; and T for terminal steady state level. This transient is a real signature of photosynthesis, since diverse events can be related to it, such as: changes in redox states of components of the linear electron transport flow, involvement of alternative electron routes, the build-up of a transmembrane pH gradient and membrane potential, activation of different nonphotochemical quenching processes, activation of the Calvin-Benson cycle, and other processes. In this review, we present our views on how different segments of the OJIPSMT transient are influenced by various photosynthetic processes, and discuss a number of studies involving mathematical modeling and simulation of the ChlF transient. A special emphasis is given to the slower PSMT phase, for which many studies have been recently published, but they are less known than on the faster OJIP phase.

  13. Evaluation of Copper Oxide Nanoparticles Toxicity Using Chlorophyll a Fluorescence Imaging in Lemna gibba

    Directory of Open Access Journals (Sweden)

    François Perreault

    2010-01-01

    Full Text Available Copper oxide nanoparticles (CuO NPs, used in antifouling paints of boats, are released in the environment and can induce toxicity to aquatic organisms. In this report, we used chlorophyll a fluorescence imaging to evaluate CuO NPs toxicity in Lemna gibba. This approach allowed to evaluate the differential effect of CuO NPs on photosynthesis of whole L. gibba plants. Exposure to 0.1 to 0.4 g/L CuO NPs during 48h induced strong inhibition of photosynthetic processes resulting in a decrease of plant growth. By using fluorescence imaging, different photosynthetic parameters were evaluated simultaneously in microplate conditions. Imaging of FO fluorescence yield showed the decrease of leaf photosynthetic active surface for whole plants exposed to CuO NPs. This method showed that CuO NPs inhibited photosystem II maximal, photosystem II operational quantum yields, and photochemical quenching of fluorescence associated with electron transport. Nonphotochemical fluorescence quenching as an indicator of energy dissipation not used in photosynthesis was shown to be increased by the effect of CuO NPs. Such approach in microplate conditions provides synchronous high repetition measurements for numerous plants. This study may give a reliable methodological approach to evaluate toxicity risk of NPs in aquatic ecosystems.

  14. From the shape of the vertical profile of in vivo fluorescence to Chlorophyll-a concentration

    Science.gov (United States)

    Mignot, A.; Claustre, H.; D'Ortenzio, F.; Xing, X.; Poteau, A.; Ras, J.

    2011-08-01

    In vivo fluorescence of Chlorophyll-a (Chl-a) is a potentially useful property to study the vertical distribution of phytoplankton biomass. However the technique is presently not fully exploited as it should be, essentially because of the difficulties in converting the fluorescence signal into an accurate Chl-a concentration. These difficulties arise noticeably from natural variations in the Chl-a fluorescence relationship, which is under the control of community composition as well as of their nutrient and light status. As a consequence, although vertical profiles of fluorescence are likely the most recorded biological property in the open ocean, the corresponding large databases are underexploited. Here with the aim to convert a fluorescence profile into a Chl-a concentration profile, we test the hypothesis that the Chl-a concentration can be gathered from the sole knowledge of the shape of the fluorescence profile. We analyze a large dataset from 18 oceanographic cruises conducted in case-1 waters from the highly stratified hyperoligotrophic waters (surface Chl-a = 0.02 mg m-3) of the South Pacific Gyre to the eutrophic waters of the Benguela upwelling (surface Chl-a = 32 mg m-3) and including the very deep mixed waters in the North Atlantic (Mixed Layer Depth = 690 m). This dataset encompasses more than 700 vertical profiles of Chl-a fluorescence as well as accurate estimations of Chl-a by High Performance Liquid Chromatography (HPLC). Two typical fluorescence profiles are identified, the uniform profile, characterized by a homogeneous layer roughly corresponding to the mixed layer, and the non-uniform profile, characterized by the presence of a Deep Chlorophyll Maximum. Using appropriate mathematical parameterizations, a fluorescence profile is subsequently represented by 3 or 5 shape parameters for uniform or non-uniform profiles, respectively. For both situations, an empirical model is developed to predict the "true" Chl-a concentration from these shape

  15. From the shape of the vertical profile of in vivo fluorescence to Chlorophyll-a concentration

    Directory of Open Access Journals (Sweden)

    J. Ras

    2011-08-01

    Full Text Available In vivo fluorescence of Chlorophyll-a (Chl-a is a potentially useful property to study the vertical distribution of phytoplankton biomass. However the technique is presently not fully exploited as it should be, essentially because of the difficulties in converting the fluorescence signal into an accurate Chl-a concentration. These difficulties arise noticeably from natural variations in the Chl-a fluorescence relationship, which is under the control of community composition as well as of their nutrient and light status. As a consequence, although vertical profiles of fluorescence are likely the most recorded biological property in the open ocean, the corresponding large databases are underexploited. Here with the aim to convert a fluorescence profile into a Chl-a concentration profile, we test the hypothesis that the Chl-a concentration can be gathered from the sole knowledge of the shape of the fluorescence profile. We analyze a large dataset from 18 oceanographic cruises conducted in case-1 waters from the highly stratified hyperoligotrophic waters (surface Chl-a = 0.02 mg m−3 of the South Pacific Gyre to the eutrophic waters of the Benguela upwelling (surface Chl-a = 32 mg m−3 and including the very deep mixed waters in the North Atlantic (Mixed Layer Depth = 690 m. This dataset encompasses more than 700 vertical profiles of Chl-a fluorescence as well as accurate estimations of Chl-a by High Performance Liquid Chromatography (HPLC. Two typical fluorescence profiles are identified, the uniform profile, characterized by a homogeneous layer roughly corresponding to the mixed layer, and the non-uniform profile, characterized by the presence of a Deep Chlorophyll Maximum. Using appropriate mathematical parameterizations, a fluorescence profile is subsequently represented by 3 or 5 shape parameters for uniform or non-uniform profiles, respectively. For both situations, an empirical model is developed to predict the "true" Chl-a concentration

  16. Effects of ambient versus reduced UV-B radiation on high arctic ¤Salix arctica¤ assessed by measurements and calculations of chlorophyll a fluorescence parameters from fluorescence transients

    DEFF Research Database (Denmark)

    Albert, K.R.; Mikkelsen, Teis Nørgaard; Ro-Poulsen, H.

    2005-01-01

    cross-section of leaf sample, the number of active PSII reaction centres (RC/CSM) and electron transport rate (ETM/CSM) and all performance indexes (PIABS, PICSo and PICSm) were increased in reduced UV-B. The total soluble flavonoid content was highest in ambient UV-B. The treatment effects......A UV-B exclusion-experiment was conducted in the high Arctic Zackenberg, NE Greenland, in which Salix arctica leaves during most of the growing season were fixed perpendicular to the solar zenith angle, thereby receiving maximal solar radiation. Covered with Teflon and Mylar foil, the leaves...... received approximately 90 and 40% of the ambient UV-B irradiance, respectively. The effects were examined through recordings of chlorophyll a fluorescence transients, determination of biomass and analysis of total carbon and nitrogen content and amount of soluble flavonoids in the leaves. The processing...

  17. Chlorophyll a Covalently Bonded to Organo-Modified Translucent Silica Xerogels: Optimizing Fluorescence and Maximum Loading

    Directory of Open Access Journals (Sweden)

    M. A. García-Sánchez

    2016-07-01

    Full Text Available Chlorophyll is a pyrrolic pigment with important optical properties, which is the reason it has been studied for many years. Recently, interest has been rising with respect to this molecule because of its outstanding physicochemical properties, particularly applicable to the design and development of luminescent materials, hybrid sensor systems, and photodynamic therapy devices for the treatment of cancer cells and bacteria. More recently, our research group has been finding evidence for the possibility of preserving these important properties of substrates containing chlorophyll covalently incorporated within solid pore matrices, such as SiO2, TiO2 or ZrO2 synthesized through the sol-gel process. In this work, we study the optical properties of silica xerogels organo-modified on their surface with allyl and phenyl groups and containing different concentrations of chlorophyll bonded to the pore walls, in order to optimize the fluorescence that these macrocyclic species displays in solution. The intention of this investigation was to determine the maximum chlorophyll a concentration at which this molecule can be trapped inside the pores of a given xerogel and to ascertain if this pigment remains trapped as a monomer, a dimer, or aggregate. Allyl and phenyl groups were deposited on the surface of xerogels in view of their important effects on the stability of the molecule, as well as over the fluorescence emission of chlorophyll; however, these organic groups allow the trapping of either chlorophyll a monomers or dimers. The determination of the above parameters allows finding the most adequate systems for subsequent in vitro or in vivo studies. The characterization of the obtained xerogels was performed through spectroscopic absorption, emission and excitation spectra. These hybrid systems can be employed as mimics of natural systems; the entrapment of chlorophyll inside pore matrices indicates that it is possible to exploit some of the most

  18. High temperature stress monitoring and detection using chlorophyll a fluorescence and infrared thermography in chrysanthemum (Dendranthema grandiflora)

    DEFF Research Database (Denmark)

    Wakjera, Eshetu Janka; Körner, Oliver; Rosenqvist, Eva

    2013-01-01

    (PSII) and stomatal conductance (gs). A combination of chlorophyll a fluorescence, gas exchange measurements and infrared thermography was applied using Chrysanthemum (Dendranthema grandiflora Tzvelev) cultivar ‘Coral Charm’ as a model species. Increasing temperature had a highly significant effect...

  19. Chlorophyll a Fluorescence in Evaluation of the Effect of Heavy Metal Soil Contamination on Perennial Grasses

    Science.gov (United States)

    Żurek, Grzegorz; Rybka, Krystyna; Pogrzeba, Marta; Krzyżak, Jacek; Prokopiuk, Kamil

    2014-01-01

    Chlorophyll a fluorescence gives information about the plant physiological status due to its coupling to the photosynthetic electron transfer chain and to the further biochemical processes. Environmental stresses, which acts synergistically, disturbs the photosynthesis. The OJIP test, elaborated by Strasser and co-workers, enables comparison of the physiological status of plants grown on polluted vs. control areas. The paper shows that the Chl a measurements are very useful tool in evaluating of heavy metal ions influence on perennial grasses, tested as potential phytoremediators. Among 5 cultivars tested, the highest concentration of Cd and Zn ions, not associated with the yield reduction, was detected in the biomass of tall fescue cv. Rahela. Chl a fluorescence interpreted as double normalized curves pointed out Rahela as the outstanding cultivar under the HM ions stress. PMID:24633293

  20. EFFECTS OF SIMULATED ACID RAIN STRESS ON GAS EXCHANGE AND CHLOROPHYLL A FLUORESCENCE PARAMETERS IN LEAVES OF LONGAN%模拟酸雨对龙眼叶片气体交换和叶绿素a荧光参数的影响

    Institute of Scientific and Technical Information of China (English)

    邱栋梁; 刘星辉; 郭素枝

    2002-01-01

    Longan (Dimorcarpus longana Lour. cv. Wulongling) seedlings of two different ages grown in pots were selected to study the effects of acid rain stress on gas exchange, and chlorophyll a fluorescence parameters and their recovery. Sulfuric acid and nitric acid were selected for the preparation of artificial acid rain, based on the mole ratio 1:5 of sulfuric acid to nitric acid in the precipitation of southern Fujian. Dilution of reagent grade acid was done with distilled water and determined by Phsj-4 acidity analyzer. A series of solutions of simulated acid rains with pH 5.6, 3.0 and 2.5 were prepared. A sprayer was used to apply the acid solution to young trees. At each application, leaves were thoroughly wetted. Sprays were repeated 12 times in 6 h at 30 min intervals. Gas exchange was detected with an open gas analyzer CID-301PS, and chlorophyll a fluorescence parameters with OS5-FL modulated chlorophyll fluorometer.The results showed that photosynthesis was inhibited by acid rain stress, and light compensation point (LCP) of stressed leaves increased. Gas exchange and chlorophyll a fluorescence parameters of leaves were reduced after 6 h stress with acid rain of pH 3.0, and could be recovered to the level of control 72 h after the treatment ended. Net photosynthetic rate (Pn), stomatal conductance (Cs), transpiration rate (Tr), ratio of variable fluorescence to initial fluorescence (Fv/F0), ratio of variable fluorescence to maximum fluorescence (Fv/Fm), quantum yield of PSⅡelectron transport (ΦPSⅡ), ratio of fluorescence decrease (Rfd), nonphotochemical quenching (qN) and photochemical quenching (qP) were reduced after a 6 h stress with acid rain of pH 2.5, and could not be recovered 72 h after the stress ceased. Intercellular CO2 concentration (Ci) decreased under treatment with acid rain of pH 2.5, rose in the first day and surpassed the level of control 72 h after the acid rain spraying stopped. Dark respiration (Rd) was increased by acid rain, and

  1. Method 445.0 In Vitro Determination of Chlorophyll a and Pheophytin ain Marine and Freshwater Algae by Fluorescence

    Science.gov (United States)

    This method provides a procedure for low level determination of chlorophyll a (chl a) and its magnesium free derivative, pheophytin a (pheo a), in marine and freshwater phytoplankton using fluorescence detection.(1,2) Phaeophorbides present in the sample are determined collective...

  2. Assessment of growth rate, chlorophyll a fluorescence, lipid peroxidation and antioxidant enzyme activity in Aphanizomenon flos-aquae, Pediastrum simplex and Synedra acus exposed to cadmium.

    Science.gov (United States)

    Ran, Xiaofei; Liu, Rui; Xu, Sha; Bai, Fang; Xu, Jinzhu; Yang, Yanjun; Shi, Junqiong; Wu, Zhongxing

    2015-03-01

    In this study, the effects of cadmium on the cyanobacterium Aphanizomenon flos-aquae, the green alga Pediastrum simplex and the diatom Synedra acus was evaluated on the basis of growth rate, chlorophyll a fluorescence, lipid peroxidation and antioxidant enzyme activity. The EC50 values (effective concentration inducing 50 % of growth inhibition) of cadmium in A. flos-aquae, P. simplex and S. acus were 1.18 ± 0.044, 4.32 ± 0.068 and 3.7 ± 0.055 mg/L, respectively. The results suggested that cadmium stress decreases growth rate and chlorophyll a concentration. The normalized chlorophyll a fluorescence transients significantly increased at cadmium concentrations of 5.0, 10.0 and 20.0 mg/L, but slightly decreased at concentrations of 0.2, 0.5 and 1.0 mg/L. The chlorophyll fluorescence parameters showed considerable variation among the three species, while lipid peroxidation and antioxidant enzyme activities showed a significant increase. Our results demonstrated that blockage of electron transport on the acceptor side of photosystem II is the mechanism responsible for cadmium toxicity in freshwater microalgae, and that the tolerance of the three species to cadmium was in the order green alga P. simplex > diatom S. acus > cyanobacterium A. flos-aquae.

  3. Linking chlorophyll a fluorescence to photosynthesis for remote sensing applications: mechanisms and challenges.

    Science.gov (United States)

    Porcar-Castell, Albert; Tyystjärvi, Esa; Atherton, Jon; van der Tol, Christiaan; Flexas, Jaume; Pfündel, Erhard E; Moreno, Jose; Frankenberg, Christian; Berry, Joseph A

    2014-08-01

    Chlorophyll a fluorescence (ChlF) has been used for decades to study the organization, functioning, and physiology of photosynthesis at the leaf and subcellular levels. ChlF is now measurable from remote sensing platforms. This provides a new optical means to track photosynthesis and gross primary productivity of terrestrial ecosystems. Importantly, the spatiotemporal and methodological context of the new applications is dramatically different compared with most of the available ChlF literature, which raises a number of important considerations. Although we have a good mechanistic understanding of the processes that control the ChlF signal over the short term, the seasonal link between ChlF and photosynthesis remains obscure. Additionally, while the current understanding of in vivo ChlF is based on pulse amplitude-modulated (PAM) measurements, remote sensing applications are based on the measurement of the passive solar-induced chlorophyll fluorescence (SIF), which entails important differences and new challenges that remain to be solved. In this review we introduce and revisit the physical, physiological, and methodological factors that control the leaf-level ChlF signal in the context of the new remote sensing applications. Specifically, we present the basis of photosynthetic acclimation and its optical signals, we introduce the physical and physiological basis of ChlF from the molecular to the leaf level and beyond, and we introduce and compare PAM and SIF methodology. Finally, we evaluate and identify the challenges that still remain to be answered in order to consolidate our mechanistic understanding of the remotely sensed SIF signal.

  4. Phenotyping of wheat cultivars for heat tolerance using chlorophyll a fluorescence

    DEFF Research Database (Denmark)

    Sharma, Dew Kumari; Andersen, Svend Bode; Ottosen, Carl-Otto

    2012-01-01

    on a physiological trait, the maximum quantum efficiency of PSII (Fv/Fm). A chlorophyll fluorescence protocol was standardised and used for repeated screening with increased selection pressure with a view to identifying a set of cultivars extreme for the trait. An initial mass screening of 1274 wheat cultivars...... with an increased genetic component (15.43.6%), which was further increased to 27.96.8% in the third screening with 41 contrasting cultivars. This contrasting set of cultivars was then used to compare the ability of chlorophyll fluorescence parameters to detect genetic difference in heat tolerance...

  5. Early stage toxicity of excess copper to photosystem II of Chlorella pyrenoidosa-OJIP chlorophyll a fluorescence analysis

    Institute of Scientific and Technical Information of China (English)

    XIA Jianrong; TIAN Qiran

    2009-01-01

    Acute toxicity of excess Cu on the photosynthetic performance of Chlorella pyrenoidosa was examined by using chlorophyll a fluorescence transients and JIP-test after exposure to elevated Cu concentrations for a short period of time.High Cu concentration resulted in a significant suppression in photosynthesis and respiration.The absorption flux (ABS/RC) per PSⅡ reaction center increased with increasing Cu concentration,but the electron transport flux (ET_0/RC) decreased.Excess Cu had an insignificant effect on the trapping flux (TR_0/RC).The decline in the efficiency with which a trapped exciton can move an electron into the electron transport chain further than QA- (ψ_o),the maximal quantum yield of primary photochemistry (φP_o),and the quantum yield of electron transport (φE_o) were also observed.The amount of active PSⅡ reaction centers per excited cross section (RC/CS) was also in consistency with the change of photosynthesis when cells were exposed to excess Cu concentration.JIP-test parameters had a good linear relationship with photosynthetic O_2 evolution.These results suggested that the decrease of photosynthesis in exposure to excess Cu may be a result of the inactivation of PSⅡ reaction centers and inhibition of electron transport in the acceptor side.

  6. Relationship between the Fluorescence Lifetime of Chlorophyll 'a' and Primary Productivity within the Mississippi River Plume and Adjacent Shelf Region

    Science.gov (United States)

    Hall, Callie; Miller, Richard L.; Fernandez, Salvador M.; McKee, Brent A.

    2000-01-01

    In situ measurements of chlorophyll fluorescence intensity have been widely used to estimate phytoplankton biomass. However, because the fluorescence quantum yield of chlorophyll a in vivo can be highly variable, measurements of chlorophyll fluorescence intensity cannot be directly correlated with phytoplankton biomass and do not provide information on the physiological state of the phytoplankton under study. Conversely, lifetime-based measurements of chlorophyll fluorescence provide a framework in which photosynthetic rates of phytoplankton can be analyzed according to phytoplankton physiology. Along with the measurement of primary production and ambient nutrient concentrations within the Mississippi River plume in the northern Gulf of Mexico, phytoplankton fluorescence lifetimes were measured using a Fluorescence Lifetime Phytoplankton Analyzer (developed under a NASA Small Business Innovative Research contract to Ciencia, Inc.). Variability of fluorescence lifetimes within the plume can be used as a background from which to interpret variations in the maximum quantum yield of photochemistry. The extent to which nutrient and effluent loading in this dynamic coastal area affect the photosynthetic performance of phytoplankton will be presented as a function of phytoplankton fluorescence lifetimes.

  7. Chlorophyll 'a' and particulate organic carbon in relation to some physico-chemical parameters along southwest coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Devi, K.S.; Balasubramanian, T.; Jayalakshmy, K.V.; Balachandran, K.K.; Sankaranarayanan, V.N.

    ' and environmental parameters except NO sub(2)-N varied spatially, while POC and NO sub(2)-N diurnally. For total and 60 mu m size fractioned chlorophyll 'a' a negative relation of high gradient with salinity while, for 20 mu m size fraction a positive relation...

  8. Chlorophyll a Fluorescence as a Tool in Evaluating the Effects of ABA Content and Ethylene Inhibitors on Quality of Flowering Potted Bougainvillea

    Directory of Open Access Journals (Sweden)

    Antonio Ferrante

    2012-01-01

    Full Text Available Flowering potted plants during the postproduction stage are usually stored in inadequate environmental conditions. We evaluated the effect of the most common storage conditions and treatments on two Bougainvillea cultivars after harvest and during recovery. Flowering potted Bougainvillea plants were treated with 100 mL 2 mM amino-oxyacetic acid (AOA or 500 ppb 1-methylcyclopropene (1-MCP prior storage in dark at 14∘C for simulating transport or storage conditions and, subsequently, transferred to growth chambers at 20∘C in the light for one week for evaluating the recovery ability. The plant stress during the experiments was assessed by ethylene, ABA, and chlorophyll a fluorescence measurements. Ethylene production was affected by temperature rather than treatments. ABA concentration declined in leaves and flowers during storage and was not affected by treatments. Fluorescence parameters appear to be very useful for screening Bougainvillea cultivars resistant to prolonged storage periods.

  9. Chlorophyll a fluorescence as a tool in evaluating the effects of ABA content and ethylene inhibitors on quality of flowering potted Bougainvillea.

    Science.gov (United States)

    Ferrante, Antonio; Trivellini, Alice; Borghesi, Eva; Vernieri, Paolo

    2012-01-01

    Flowering potted plants during the postproduction stage are usually stored in inadequate environmental conditions. We evaluated the effect of the most common storage conditions and treatments on two Bougainvillea cultivars after harvest and during recovery. Flowering potted Bougainvillea plants were treated with 100 mL 2 mM amino-oxyacetic acid (AOA) or 500 ppb 1-methylcyclopropene (1-MCP) prior storage in dark at 14°C for simulating transport or storage conditions and, subsequently, transferred to growth chambers at 20°C in the light for one week for evaluating the recovery ability. The plant stress during the experiments was assessed by ethylene, ABA, and chlorophyll a fluorescence measurements. Ethylene production was affected by temperature rather than treatments. ABA concentration declined in leaves and flowers during storage and was not affected by treatments. Fluorescence parameters appear to be very useful for screening Bougainvillea cultivars resistant to prolonged storage periods.

  10. Two-photon excited fluorescence from higher electronic states of chlorophylls in photosynthetic antenna complexes a new approach to detect strong excitonic chlorophyll a/b coupling

    CERN Document Server

    Leupold, D; Ehlert, J; Irrgang, K D; Renger, G; Lokstein, H

    2002-01-01

    Stepwise two-photon excitation of chlorophyll a and b in the higher plant main light-harvesting complex (LHC II) and the minor complex CP29 (as well as in organic solution) with 100-fs pulses in the Q/sub y/ region results in a weak blue fluorescence. The dependence of the spectral shape of the blue fluorescence on excitation wavelength offers a new approach to elucidate the long-standing problem of the origin of spectral "chlorophyll forms" in pigment-protein complexes, in particular the characterization of chlorophyll a/b-heterodimers. As a first result we present evidence for the existence of strong chlorophyll a/b-interactions (excitonically coupled transitions at 650 and 680 nm) in LHC II at ambient temperature. In comparison with LHC II, the experiments with CP29 provide further evidence that the lowest energy chlorophyll a transition (at ~680 nm) is not excitonically coupled to chlorophyll b. (22 refs).

  11. Leaf Gas Exchange and Chlorophyll a Fluorescence Imaging of Rice Leaves Infected with Monographella albescens.

    Science.gov (United States)

    Tatagiba, Sandro Dan; DaMatta, Fábio Murilo; Rodrigues, Fabrício Ávila

    2015-02-01

    This study was intended to analyze the photosynthetic performance of rice leaf blades infected with Monographella albescens by combining chlorophyll (Chl) a fluorescence images with gas exchange and photosynthetic pigment pools. The net CO2 assimilation rate, stomatal conductance, transpiration rate, total Chl and carotenoid pools, and Chl a/b ratio all decreased but the internal CO2 concentration increased in the inoculated plants compared with their noninoculated counterparts. The first detectable changes in the images of Chl a fluorescence from the leaves of inoculated plants were already evident at 24 h after inoculation (hai) and increased dramatically as the leaf scald lesions expanded. However, these changes were negligible for the photosystem II photochemical efficiency (Fv/Fm) at 24 hai, in contrast to other Chl fluorescence traits such as the photochemical quenching coefficient, yield of photochemistry, and yield for dissipation by downregulation; which, therefore, were much more sensitive than the Fv/Fm ratio in assessing the early stages of fungal infection. It was also demonstrated that M. albescens was able to impair the photosynthetic process in both symptomatic and asymptomatic leaf areas. Overall, it was proven that Chl a fluorescence imaging is an excellent tool to describe the loss of functionality of the photosynthetic apparatus occurring in rice leaves upon infection by M. albescens.

  12. Underwater Optical Fiber Fluorescent System for Measuring Chlorophyll-a Concentration

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Using optical fiber fluorescent technology,a new method for measuring alga concentration in water is presented. The system can realize on-line measurement for alga concentration using He-Ne laser as the light source. It can also effectively detect weak signals. The system with a passive sensor head has such advantages as simple structure, high sensitivity and high accuracy. It has been demonstrated that this system can be used to monitor water quality and can also be used to survey some matter.

  13. Physiological responses of Brassica napus to fulvic acid under water stress: Chlorophyll a fluorescence and antioxidant enzyme activity

    Institute of Scientific and Technical Information of China (English)

    Ramin; Lotfi; Mohammad; Pessarakli; Puriya; Gharavi-Kouchebagh; Hossein; Khoshvaghti

    2015-01-01

    The ameliorative effect of fulvic acid(0, 300, and 600 mg L-1) on photosystem II and antioxidant enzyme activity of the rapeseed(Brassica napus L.) plant under water stress(60, 100, and 140 mm evaporation from class A pan) was studied using split plots in a randomized complete block design with three replications. Results indicated that application of fulvic acid(FA) improved the maximum quantum efficiency of PSII(Fv/Fm)and performance index(PI) of plants under both well-watered and limited-water conditions. The time span from Foto Fmand the energy necessary for the closure of all reaction centers was significantly increased, but the size of the plastoquinone pool was reduced with increasing water stress levels. Plants treated with FA had higher peroxidase and catalase activities under all irrigation conditions. Activities of ascorbate peroxidase and superoxide dismutase in plants increased with increasing water stress. Malondialdehyde increased under severe water stress, but application of FA significantly decreased lipid peroxidation. Production of reactive oxygen species(ROS) is a common phenomenon in plants under stress. Under this condition, the balance between the production of ROS and the quenching activity of antioxidants is upset, often resulting in oxidative damage. In this study, application of FA significantly increased fluorescence of chlorophyll a, inhibiting ROS production and enhancing antioxidant enzymes activity that destroyed ROS. Thus, ROS in plant cells was reduced under water stress by application of FA and consequently lipid peroxidation was reduced.

  14. Physiological responses of Brassica napus to fulvic acid under water stress:Chlorophyll a fluorescence and antioxidant enzyme activity

    Institute of Scientific and Technical Information of China (English)

    Ramin Lotfi; Mohammad Pessarakli; Puriya Gharavi-Kouchebagh; Hossein Khoshvaghti

    2015-01-01

    The ameliorative effect of fulvic acid (0, 300, and 600 mg L−1) on photosystem II and antioxidant enzyme activity of the rapeseed (Brassica napus L.) plant under water stress (60, 100, and 140 mm evaporation from class A pan) was studied using split plots in a randomized complete block design with three replications. Results indicated that application of fulvic acid (FA) improved the maximum quantum efficiency of PSII (Fv/Fm) and performance index (PI) of plants under both well-watered and limited-water conditions. The time span from Fo to Fm and the energy necessary for the closure of all reaction centers was significantly increased, but the size of the plastoquinone pool was reduced with increasing water stress levels. Plants treated with FA had higher peroxidase and catalase activities under all irrigation conditions. Activities of ascorbate peroxidase and superoxide dismutase in plants increased with increasing water stress. Malondialdehyde increased under severe water stress, but application of FA significantly decreased lipid peroxidation. Production of reactive oxygen species (ROS) is a common phenomenon in plants under stress. Under this condition, the balance between the production of ROS and the quenching activity of antioxidants is upset, often resulting in oxidative damage. In this study, application of FA significantly increased fluorescence of chlorophyll a, inhibiting ROS production and enhancing antioxidant enzymes activity that destroyed ROS. Thus, ROS in plant cells was reduced under water stress by application of FA and consequently lipid peroxidation was reduced.

  15. Experimental effects of sand-dust storm on tolerance index, percentage phototoxicity and chlorophyll a fluorescence of Vigna radiata L.

    Directory of Open Access Journals (Sweden)

    M. Alavi

    2015-03-01

    Full Text Available In arid and semi-arid parts of the world excessive mineral aerosol carried by air parcels is a common climatic incident with well-known environmental side effects. In this way, we studied the role of sand-dust accumulation on various aspects of productivity of Vigna radiata L. including dry mass (DM, chlorophyll (Chl a, b, Chlorophyll a fluorescence (effective quantum yield of PSII photochemistry (ФPSII, maximal quantum yield of PSII photochemistry (Fv/Fm and electron transport rate (ETR. V. radiata was exposed to a gradient of dust concentrations in a dust chamber (0.5 (T1, 1(T2 and 1.5 g/m3 (T3 simulated by a dust generator for a period of 60 days. Results of this experiment indicate that DM and Chl content of shoot are negatively correlated with the intensity of the dust exposure. Exposure of V. radiata to dust compared with the control was caused 5% (T1, 14% (T2 and 27% (T3 reduction in leaf DM (p≤0.05, ANOVA. Also, exposure to the dust induced a significant (p≤0.05 reduction in the Total Chl content in (T3 25%. Also, we showed that ФPSII, ETR and Fv/Fm were affected by increasing of the dust concentrations. Exposure to the dust resulted in a significant reduction in ETR of 15%, 22%, and 43%.

  16. Physiological responses of Brassica napus to fulvic acid under water stress: Chlorophyll a fluorescence and antioxidant enzyme activity

    Directory of Open Access Journals (Sweden)

    Ramin Lotfi

    2015-10-01

    Full Text Available The ameliorative effect of fulvic acid (0, 300, and 600 mg L− 1 on photosystem II and antioxidant enzyme activity of the rapeseed (Brassica napus L. plant under water stress (60, 100, and 140 mm evaporation from class A pan was studied using split plots in a randomized complete block design with three replications. Results indicated that application of fulvic acid (FA improved the maximum quantum efficiency of PSII (Fv/Fm and performance index (PI of plants under both well-watered and limited-water conditions. The time span from Fo to Fm and the energy necessary for the closure of all reaction centers was significantly increased, but the size of the plastoquinone pool was reduced with increasing water stress levels. Plants treated with FA had higher peroxidase and catalase activities under all irrigation conditions. Activities of ascorbate peroxidase and superoxide dismutase in plants increased with increasing water stress. Malondialdehyde increased under severe water stress, but application of FA significantly decreased lipid peroxidation. Production of reactive oxygen species (ROS is a common phenomenon in plants under stress. Under this condition, the balance between the production of ROS and the quenching activity of antioxidants is upset, often resulting in oxidative damage. In this study, application of FA significantly increased fluorescence of chlorophyll a, inhibiting ROS production and enhancing antioxidant enzymes activity that destroyed ROS. Thus, ROS in plant cells was reduced under water stress by application of FA and consequently lipid peroxidation was reduced.

  17. Photochemical properties in flag leaves of a super-high-yielding hybrid rice and a traditional hybrid rice (Oryza sativa L.) probed by chlorophyll a fluorescence transient.

    Science.gov (United States)

    Zhang, Meiping; Shan, YongJie; Kochian, Leon; Strasser, Reto J; Chen, GuoXiang

    2015-12-01

    Chlorophyll a fluorescence of flag leaves in a super-high-yielding hybrid rice (Oryza sativa L.) LYPJ, and a traditional hybrid rice SY63 cultivar with lower grain yield, which were grown in the field, were investigated from emergence through senescence of flag leaves. As the flag leaf matured, there was an increasing trend in photosynthetic parameters such as quantum efficiency of primary photochemistry ([Formula: see text] Po) and efficiency of electron transport from PS II to PS I (Ψ Eo). The overall photosynthetic performance index (PIABS) was significantly higher in the high-yielding LYPJ compared to SY63 during the entire reproductive stage of the plant, the same to MDA content. However, [Formula: see text] Po(=F V/F M), an indicator of the primary photochemistry of the flag leaf, did not display significant changes with leaf age and was not significantly different between the two cultivars, suggesting that PIABS is a more sensitive parameter than [Formula: see text] Po (=F V/F M) during leaf age for distinguishing between cultivars differing in yield.

  18. [Effects of long-term ozone exposure on chlorophyll a fluorescence and gas exchange of winter-wheat leaves].

    Science.gov (United States)

    Zheng, You-fei; Zhao, Ze; Wu, Rong-jun; Hu, Cheng-da; Liu, Hong-ju

    2010-02-01

    In order to provide basis for evaluating the effects of air pollutant such as O3 on crops yield and food security, the effects of O3 fumigation (ambient air, CK; 100 nL x L(-1), T1; 150 nL x L(-1), T2) on chlorophyll a fluorescence and gas exchange of a field-grown winter-wheat (Triticum aestivum L. Yang Mai 13) in different growing period were conducted via open-top chamber technique in conjunction with Diving-PAM fluorometer and LC pro + photosynthesis system. Results indicated that Fv/Fm caused by T1 was higher than 0.8, while the Pm, qP, (1-qP)/NPQ and Y(NO) were similar to those of CK, the NPQ and Y(NPQ) were increased by 13.5%-29.0% and 13.3%-22.7% respectively due to O3 stress. Under nature light (rapid light curve, RLC) and after dark adaptation (induction curve in steady-state, IC) the Yield of T1 was decreased by 4.6%-7.6% and 11.3%-19.3% respectively, with 8.0%-9.8% and 11.0%-23.1% reductions in Pn, and Gs compared to CK, respectively. In heading stage and blooming stage, the Ls of T, was greater than CK, but in filling stage and mature stage, it became lower compared to CK. The Fv/Fm was slightly lower than 0.8 under T2 treatment, with the Y(NO), (1-qP)/NPQ and c(i) were increased by 37.9%-75.6%, 157.1%-325.8% and 3.4%-18.1% relative to CK. Under RLC and IC condition, the Yield of T2 was respectively decreased by 10.2%-13.6% and 21.4%-29.1%, and the Pn, Ls, qP, Pm, NPQ and Y(NPQ) were decreased by 28.1%-39.9%, 5.2%-21.3%, 15.8%-30.4%, 27.6%-45.6%, 3.3%-52.9% and 5.7%-17.9% in comparison, respectively. Obviously the enhanced O3 causes a significant decrease in the capacity of photosynthesis of winter wheat, and the influence mechanism presents a series of dynamic changes according to growing seasons. The reduction of Fv/Fm under T1 treatment is a response of PS II reaction center to the increase of NPQ, and the decrease in Pn and Yield is a consequence of protective adjustment, by this approach, the antioxidant system and energy dissipation mechanism can

  19. 小球藻内叶绿素a荧光特征的研究%Fluorescence Characteristics Studies of Chlorophyll a in Chlorella vulgaris

    Institute of Scientific and Technical Information of China (English)

    王志勤

    2012-01-01

    由于叶绿素a外环境极性的不同,其荧光行为有很大的改变。通过小球藻体内叶绿素荧光光谱特性的研究,发现其体内叶绿素的激发波长有在丙酮溶剂中的相同,均为430nm,但发射波长为680nm,红移了13nm。利用小球藻的叶绿素荧光强度进行水体中叶绿素a的定量检测,在浓度为1—100μg/L的浓度范围内,相对荧光强度与叶绿素浓度有很好的相关性,线性方程为Y=0.5338x+1.8515,线性相关系数R2为0.9974。%The fluorescence characteristics of Chlorophyll a were found to have great change under different polar environment. For the Chlorophyll a in Chlorella vulgaris, its excite wavelength was kept at 430 nm, but 13 nm red-shift was found for its emission wavelength. The fluorescence intensity of Chlorella vulgaris was used for the determination of Chlorophyll a in water, indicating that the response fluorescence intensity and the concentration presented a good linearity in the range of 1 to 100 μg/L, and the linear equation was y = 0.5338x + 1.8515, R2 = 0.9947.

  20. Atividade da redutase do nitrato e fluorescência da clorofila a em mamoeiro Nitrate reductase activity and chlorophyll a fluorescence in papaya

    Directory of Open Access Journals (Sweden)

    Renata Venturim Fontes

    2008-03-01

    correlation r= 0,740 and coefficient of determination r²= 0,706 and Sunrise Solo 72/12 (coefficient of correlation r= 0,960 and coefficient of determination r²= 0,945. These results suggest that there is a correlation between chlorophyll a fluorescence and nitrate reductase activity in these plants.

  1. Effects of Low Temperature Stress and INA Bacteria on Chlorophyll a Fluorescence Induction Kinetics in Young Fruit of Two Apricot Cultivars

    Institute of Scientific and Technical Information of China (English)

    YANG Jian-min; MENG Qing-rui; PENG Wei-xiu; WANG Xue-dong; ZHANG Yuan-hui; SUN Fu-zai; ZHAO Ting-chang; LI Shao-hua

    2002-01-01

    Effects of low temperature and INA bacteria on the change of chlorophyll a fluorescence inyoung fruit from two apricot cultivars were investigated. Low temperature decreased the potential activity(Fv/Fo) ,conversion efficiency of primary light energy (Fv/Fm)of PS Ⅱ and photochemical quenching (qP) inyoung fruit of two apricot cultivars. Low temperature enhanced non-photochemical quenching qN, decreasingthe quantum yield of photosynthetic electron transfer. The presence of ice nucleating active (INA) bacteria in-tensified the effects of low temperature, raised the injury temperature threshold from - 4℃ to - 2 - - 3℃.INA bacteria can be a factor to induce frost susceptibility of apricot fruit. The amount of damaged PS Ⅱ activi-ty center was related to apricot fruit size and cultivar.

  2. Latent manganese deficiency in barley can be diagnosed and remediated on the basis of chlorophyll a fluorescence measurements

    DEFF Research Database (Denmark)

    Schmidt, Sidsel Birkelund; Pedas, Pai; Laursen, Kristian Holst;

    2013-01-01

    chlorophyll (Chl) a fluorescence as a tool for diagnosis of latent Mn deficiency. Methods: Barley plants grown under controlled greenhouse conditions or in the field were exposed to different intensities of Mn deficiency. The responses were characterised by analysis of Chl a fluorescence, photosystem II (PSII......) proteins and mineral elements. Results: Analysis of the Chl a fluorescence induction kinetics (FIK) revealed distinct changes long before any visual symptoms of Mn deficiency were apparent. The changes were specific for Mn and did not occur in Mg, S, Fe or Cu deficient plants. The changes in Mn deficient......Background and aims: Manganese (Mn) deficiency represents a major plant nutritional disorder in winter cereals. The deficiency frequently occurs latently and the lack of visual symptoms prevents timely remediation and cause significant yield reductions. These problems prompted us to investigate...

  3. Variations between the photosynthetic properties of elite and landrace Chinese rice cultivars revealed by simultaneous measurements of 820 nm transmission signal and chlorophyll a fluorescence induction.

    Science.gov (United States)

    Hamdani, Saber; Qu, Mingnan; Xin, Chang-Peng; Li, Ming; Chu, Chengcai; Govindjee; Zhu, Xin-Guang

    2015-04-01

    The difference between the photosynthetic properties of elite and landrace Chinese rice cultivars was studied, using chlorophyll a fluorescence induction (mostly a monitor of Photosystem II activity) and I820 transmission signal (mostly a monitor of Photosystem I activity) to identify potential photosynthetic features differentiating these two groups, which show different degrees of artificial selection and grain yields. A higher fluorescence (related to PSII) IP rise phase and a lower P700(+) (related to PSI) accumulation were observed in the elite cultivars as compared to the landraces. Using these data, together with simulation data from a kinetic model of fluorescence induction, we show that the high IP rise phase and the low P700(+) accumulation can be a result of transient block on electron transfer and traffic jam on the electron acceptor side of PSI under a high [NADPH]/[NADP(+)] ratio. Considering that the ferredoxin NADP(+) reductase (FNR) transcript levels of XS134 (a representative elite cultivars) remains unaffected during the first few minutes of light/dark transition compared to Q4145 (a representative landrace cultivars), which shows a strong decline during the same time range, we propose that the FNR of elite cultivars may take more time to be inactivated in darkness. During this time the FNR enzyme can continue to reduce NADP(+) molecules, leading to initially high [NADPH]/[NADP(+)] ratio during OJIP transient. These data suggested a potential artificial selection of FNR during the breeding process of these examined elite rice cultivars.

  4. Nonphotochemical quenching of excitation energy in photosystem II. A picosecond time-resolved study of the low yield of chlorophyll a fluorescence induced by single-turnover flash in isolated spinach thylakoids.

    Science.gov (United States)

    Vasil'ev, S; Bruce, D

    1998-08-04

    Chlorophyll a fluorescence emission is widely used as a noninvasive measure of a number of parameters related to photosynthetic efficiency in oxygenic photosynthetic organisms. The most important component for the estimation of photochemistry is the relative increase in fluorescence yield between dark-adapted samples which have a maximal capacity for photochemistry and a minimal fluorescence yield (F0) and light-saturated samples where photochemistry is saturated and fluorescence yield is maximal (Fm). However, when photosynthesis is saturated with a short (less than 50 micro(s)) flash of light, which induces only one photochemical turnover of photosystem II, the maximal fluorescence yield is significantly lower (Fsat) than when saturation is achieved with a millisecond duration multiturnover flash (Fm). To investigate the origins of the difference in fluorescence yield between these two conditions, our time-resolved fluorescence apparatus was modified to allow collection of picosecond time-resolved decay kinetics over a short time window immediately following a saturating single-turnover flash (Fsat) as well as after a multiturnover saturating pulse (Fm). Our data were analyzed with a global kinetic model based on an exciton radical pair equilibrium model for photosystem II. The difference between Fm and Fsat was modeled well by changing only the rate constant for quenching of excitation energy in the antenna of photosystem II. An antenna-based origin for the quenching was verified experimentally by the observation that addition of the antenna quencher 5-hydroxy-1,4-naphthoquinone to thylakoids under Fm conditions resulted in decay kinetics and modeled kinetic parameters very similar to those observed under Fsat conditions in the absence of added quinone. Our data strongly support the origin of low fluorescence yield at Fsat to be an antenna-based nonphotochemical quenching of excitation energy in photosystem II which has not usually been considered explicitly in

  5. Chlorophyll a fluorescence induction: a personal perspective of the thermal phase, the J-I-P rise.

    Science.gov (United States)

    Stirbet, Alexandrina; Govindjee

    2012-09-01

    The fast (up to 1 s) chlorophyll (Chl) a fluorescence induction (FI) curve, measured under saturating continuous light, has a photochemical phase, the O-J rise, related mainly to the reduction of Q(A), the primary electron acceptor plastoquinone of Photosystem II (PSII); here, the fluorescence rise depends strongly on the number of photons absorbed. This is followed by a thermal phase, the J-I-P rise, which disappears at subfreezing temperatures. According to the mainstream interpretation of the fast FI, the variable fluorescence originates from PSII antenna, and the oxidized Q(A) is the most important quencher influencing the O-J-I-P curve. As the reaction centers of PSII are gradually closed by the photochemical reduction of Q(A), Chl fluorescence, F, rises from the O level (the minimal level) to the P level (the peak); yet, the relationship between F and [Q(A) (-)] is not linear, due to the presence of other quenchers and modifiers. Several alternative theories have been proposed, which give different interpretations of the O-J-I-P transient. The main idea in these alternative theories is that in saturating light, Q(A) is almost completely reduced already at the end of the photochemical phase O-J, but the fluorescence yield is lower than its maximum value due to the presence of either a second quencher besides Q(A), or there is an another process quenching the fluorescence; in the second quencher hypothesis, this quencher is consumed (or the process of quenching the fluorescence is reversed) during the thermal phase J-I-P. In this review, we discuss these theories. Based on our critical examination, that includes pros and cons of each theory, as well mathematical modeling, we conclude that the mainstream interpretation of the O-J-I-P transient is the most credible one, as none of the alternative ideas provide adequate explanation or experimental proof for the almost complete reduction of Q(A) at the end of the O-J phase, and for the origin of the fluorescence

  6. Detection of herbicide effects on pigment composition and PSII photochemistry in Helianthus annuus by Raman spectroscopy and chlorophyll a fluorescence

    Science.gov (United States)

    Vítek, Petr; Novotná, Kateřina; Hodaňová, Petra; Rapantová, Barbora; Klem, Karel

    2017-01-01

    The effects of herbicides from three mode-of-action groups - inhibitors of protoporphyrinogen oxidase (carfentrazone-ethyl), inhibitors of carotenoid biosynthesis (mesotrione, clomazone, and diflufenican), and inhibitors of acetolactate synthase (amidosulfuron) - were studied in sunflower plants (Helianthus annuus). Raman spectroscopy, chlorophyll fluorescence (ChlF) imaging, and UV screening of ChlF were combined to evaluate changes in pigment composition, photosystem II (PSII) photochemistry, and non-photochemical quenching in plant leaves 6 d after herbicide application. The Raman signals of phenolic compounds, carotenoids, and chlorophyll were evaluated and differences in their intensity ratios were observed. Strongly augmented relative content of phenolic compounds was observed in the case of amidosulfuron-treated plants, with a simultaneous decrease in the chlorophyll/carotenoid intensity ratio. The results were confirmed by in vivo measurement of flavonols using UV screening of ChlF. Herbicides from the group of carotenoid biosynthesis inhibitors significantly decreased both the maximum quantum efficiency of PSII and non-photochemical quenching as determined by ChlF. Resonance Raman imaging (mapping) data with high resolution (150,000-200,000 spectra) are presented, showing the distribution of carotenoids in H. annuus leaves treated by two of the herbicides acting as inhibitors of carotenoid biosynthesis (clomazone or diflufenican). Clear signs were observed that the treatment induced carotenoid depletion within sunflower leaves. The depletion spatial pattern registered differed depending on the type of herbicide applied.

  7. Detection of herbicide effects on pigment composition and PSII photochemistry in Helianthus annuus by Raman spectroscopy and chlorophyll a fluorescence.

    Science.gov (United States)

    Vítek, Petr; Novotná, Kateřina; Hodaňová, Petra; Rapantová, Barbora; Klem, Karel

    2017-01-01

    The effects of herbicides from three mode-of-action groups - inhibitors of protoporphyrinogen oxidase (carfentrazone-ethyl), inhibitors of carotenoid biosynthesis (mesotrione, clomazone, and diflufenican), and inhibitors of acetolactate synthase (amidosulfuron) - were studied in sunflower plants (Helianthus annuus). Raman spectroscopy, chlorophyll fluorescence (ChlF) imaging, and UV screening of ChlF were combined to evaluate changes in pigment composition, photosystem II (PSII) photochemistry, and non-photochemical quenching in plant leaves 6d after herbicide application. The Raman signals of phenolic compounds, carotenoids, and chlorophyll were evaluated and differences in their intensity ratios were observed. Strongly augmented relative content of phenolic compounds was observed in the case of amidosulfuron-treated plants, with a simultaneous decrease in the chlorophyll/carotenoid intensity ratio. The results were confirmed by in vivo measurement of flavonols using UV screening of ChlF. Herbicides from the group of carotenoid biosynthesis inhibitors significantly decreased both the maximum quantum efficiency of PSII and non-photochemical quenching as determined by ChlF. Resonance Raman imaging (mapping) data with high resolution (150,000-200,000 spectra) are presented, showing the distribution of carotenoids in H. annuus leaves treated by two of the herbicides acting as inhibitors of carotenoid biosynthesis (clomazone or diflufenican). Clear signs were observed that the treatment induced carotenoid depletion within sunflower leaves. The depletion spatial pattern registered differed depending on the type of herbicide applied.

  8. Comparative assessment of single and joint effects of diuron and Irgarol 1051 on Arctic and temperate microalgae using chlorophyll a fluorescence imaging

    KAUST Repository

    Kottuparambil, Sreejith

    2017-02-06

    Ship groundings and ice-breakers can cause pollution of the polar environment with antifouling biocides such as diuron and Irgarol 1051. The present study used pulse amplitude modulated fluorometry to compare single and joint toxicities of diuron and Irgarol 1051 on two freshwater taxa of microalgae (Chlorella and Chlamydomonas) originating from Arctic and temperate regions. 30min acute toxicity tests using chlorophyll a (Chl a) fluorescence revealed that Arctic strains of microalgae were more sensitive to herbicides than their temperate counterparts. Diuron and Irgarol 1051 had equal toxicities in the Arctic species, while Irgarol 1051 was more toxic (EC50=5.55–14.70μgL−1) than diuron (EC50=12.90–>40μgL−1) in the temperate species. Toxicity assessment of various mixtures of diuron and Irgarol 1051 revealed antagonistic, additive, and synergistic effects. Our data suggest that herbicides can adversely affect photosynthesis in Arctic microalgae at relatively low levels, and their impact can increase under complex mixture conditions.

  9. Calibration procedures and first dataset of Southern Ocean chlorophyll a profiles collected by elephant seals equipped with a newly developed CTD-fluorescence tags

    Science.gov (United States)

    Guinet, C.; Xing, X.; Walker, E.; Monestiez, P.; Marchand, S.; Picard, B.; Jaud, T.; Authier, M.; Cotté, C.; Dragon, A. C.; Diamond, E.; Antoine, D.; Lovell, P.; Blain, S.; D'Ortenzio, F.; Claustre, H.

    2013-02-01

    , we are able to assess the 3-dimension distribution of phytoplankton concentration by foraging southern elephant seals. This approach reveals that for the Indian sector of the SO, the surface chlorophyll a (chl a) concentrations provided by MODIS were underestimated by a factor 2 compared to chl a concentrations estimated from HPLC corrected in situ fluorescence measurements. The scientific outcomes of this programme include an improved understanding of both the present state and variability in ocean biology, and the accompanying biogeochemistry, as well as the delivery of real-time and open-access data to scientists (doi:10.7491/MEMO.1).

  10. Indicators: Chlorophyll a

    Science.gov (United States)

    Chlorophyll allows plants (including algae) to photosynthesize, i.e., use sunlight to convert simple molecules into organic compounds. Chlorophyll a is the predominant type of chlorophyll found in green plants and algae.

  11. Systems approach to excitation-energy and electron transfer reaction networks in photosystem II complex: model studies for chlorophyll a fluorescence induction kinetics.

    Science.gov (United States)

    Matsuoka, Takeshi; Tanaka, Shigenori; Ebina, Kuniyoshi

    2015-09-07

    Photosystem II (PS II) is a protein complex which evolves oxygen and drives charge separation for photosynthesis employing electron and excitation-energy transfer processes over a wide timescale range from picoseconds to milliseconds. While the fluorescence emitted by the antenna pigments of this complex is known as an important indicator of the activity of photosynthesis, its interpretation was difficult because of the complexity of PS II. In this study, an extensive kinetic model which describes the complex and multi-timescale characteristics of PS II is analyzed through the use of the hierarchical coarse-graining method proposed in the authors׳ earlier work. In this coarse-grained analysis, the reaction center (RC) is described by two states, open and closed RCs, both of which consist of oxidized and neutral special pairs being in quasi-equilibrium states. Besides, the PS II model at millisecond scale with three-state RC, which was studied previously, could be derived by suitably adjusting the kinetic parameters of electron transfer between tyrosine and RC. Our novel coarse-grained model of PS II can appropriately explain the light-intensity dependent change of the characteristic patterns of fluorescence induction kinetics from O-J-I-P, which shows two inflection points, J and I, between initial point O and peak point P, to O-J-D-I-P, which shows a dip D between J and I inflection points.

  12. Comparison of a compatible and an incompatible pepper-tobamovirus interaction by biochemical and non-invasive techniques: chlorophyll a fluorescence, isothermal calorimetry and FT-Raman spectroscopy.

    Science.gov (United States)

    Rys, Magdalena; Juhász, Csilla; Surówka, Ewa; Janeczko, Anna; Saja, Diana; Tóbiás, István; Skoczowski, Andrzej; Barna, Balázs; Gullner, Gábor

    2014-10-01

    Leaves of a pepper cultivar harboring the L(3) resistance gene were inoculated with Obuda pepper virus (ObPV), which led to the appearance of hypersensitive necrotic lesions approx. 72 h post-inoculation (hpi) (incompatible interaction), or with Pepper mild mottle virus (PMMoV) that caused no visible symptoms on the inoculated leaves (compatible interaction). ObPV inoculation of leaves resulted in ion leakage already 18 hpi, up-regulation of a pepper carotenoid cleavage dioxygenase (CCD) gene from 24 hpi, heat emission and declining chlorophyll a content from 48 hpi, and partial desiccation from 72 hpi. After the appearance of necrotic lesions a strong inhibition of photochemical energy conversion was observed, which led to photochemically inactive leaf areas 96 hpi. However, leaf tissues adjacent to these inactive areas showed elevated ΦPSII and Fv/Fm values proving the advantage of chlorophyll a imaging technique. PMMoV inoculation also led to a significant rise of ion leakage and heat emission, to the up-regulation of the pepper CCD gene as well as to decreased PSII efficiency, but these responses were much weaker than in the case of ObPV inoculation. Chlorophyll b and total carotenoid contents as measured by spectrophotometric methods were not significantly influenced by any virus inoculations when these pigment contents were calculated on leaf surface basis. On the other hand, near-infrared FT-Raman spectroscopy showed an increase of carotenoid content in ObPV-inoculated leaves suggesting that the two techniques detect different sets of compounds.

  13. The chlorophyll a fluorescence induction pattern in chloroplasts upon repetitive single turnover excitations: accumulation and function of QB-nonreducing centers.

    Science.gov (United States)

    Vredenberg, Wim; Kasalicky, Vojtech; Durchan, Milan; Prasil, Ondrej

    2006-03-01

    The increase of chlorophyll fluorescence yield in chloroplasts in a 12.5 Hz train of saturating single turnover flashes and the kinetics of fluorescence yield decay after the last flash have been analyzed. The approximate twofold increase in Fm relative to Fo, reached after 30-40 flashes, is associated with a proportional change in the slow (1-20 s) component of the multiphasic decay. This component reflects the accumulation of a sizeable fraction of QB-nonreducing centers. It is hypothesized that the generation of these centers occurs in association with proton transport across the thylakoid membrane. The data are quantitatively consistent with a model in which the fluorescence quenching of QB-nonreducing centers is reversibly released after second excitation and electron trapping on the acceptor side of Photosystem II.

  14. Kinetic models of photosystem II should accommodate the effect of donor side quenching on variable chlorophyll a fluorescence in the microseconds time

    NARCIS (Netherlands)

    Vredenberg, W.J.

    2009-01-01

    Quantitative data on laser flash-induced variable fluorescence in the 100 ns to 1 ms time range (Belyaeva et al. in Photosynth Res 98:105–119, 2008) confirming those of others (Steffen et al. in Biochemistry 40:173–180, 2001, Biochemistry 44:3123–3132, 2005; Belyaeva et al. in Biophysics 51(6):976–9

  15. Retrieving the vertical distribution of chlorophyll a concentration and phytoplankton community composition from in situ fluorescence profiles: A method based on a neural network with potential for global-scale applications

    Science.gov (United States)

    Sauzède, R.; Claustre, H.; Jamet, C.; Uitz, J.; Ras, J.; Mignot, A.; D'Ortenzio, F.

    2015-01-01

    neural network-based method is developed to assess the vertical distribution of (1) chlorophyll a concentration ([Chl]) and (2) phytoplankton community size indices (i.e., microphytoplankton, nanophytoplankton, and picophytoplankton) from in situ vertical profiles of chlorophyll fluorescence. This method (FLAVOR for Fluorescence to Algal communities Vertical distribution in the Oceanic Realm) uses as input only the shape of the fluorescence profile associated with its acquisition date and geo-location. The neural network is trained and validated using a large database including 896 concomitant in situ vertical profiles of High-Performance Liquid Chromatography (HPLC) pigments and fluorescence. These profiles were collected during 22 oceanographic cruises representative of the global ocean in terms of trophic and oceanographic conditions, making our method applicable to most oceanic waters. FLAVOR is validated with respect to the retrieval of both [Chl] and phytoplankton size indices using an independent in situ data set and appears to be relatively robust spatially and temporally. To illustrate the potential of the method, we applied it to in situ measurements of the BATS (Bermuda Atlantic Time Series Study) site and produce monthly climatologies of [Chl] and associated phytoplankton size indices. The resulting climatologies appear very promising compared to climatologies based on available in situ HPLC data. With the increasing availability of spatially and temporally well-resolved data sets of chlorophyll fluorescence, one possible global-scale application of FLAVOR could be to develop 3-D and even 4-D climatologies of [Chl] and associated composition of phytoplankton communities. The Matlab and R codes of the proposed algorithm are provided as supporting information.

  16. Excitation relaxation dynamics and energy transfer in fucoxanthin-chlorophyll a/c-protein complexes, probed by time-resolved fluorescence.

    Science.gov (United States)

    Akimoto, Seiji; Teshigahara, Ayaka; Yokono, Makio; Mimuro, Mamoru; Nagao, Ryo; Tomo, Tatsuya

    2014-09-01

    In algae, light-harvesting complexes contain specific chlorophylls (Chls) and keto-carotenoids; Chl a, Chl c, and fucoxanthin (Fx) in diatoms and brown algae; Chl a, Chl c, and peridinin in photosynthetic dinoflagellates; and Chl a, Chl b, and siphonaxanthin in green algae. The Fx-Chl a/c-protein (FCP) complex from the diatom Chaetoceros gracilis contains Chl c1, Chl c2, and the keto-carotenoid, Fx, as antenna pigments, in addition to Chl a. In the present study, we investigated energy transfer in the FCP complex associated with photosystem II (FCPII) of C. gracilis. For these investigations, we analyzed time-resolved fluorescence spectra, fluorescence rise and decay curves, and time-resolved fluorescence anisotropy data. Chl a exhibited different energy forms with fluorescence peaks ranging from 677 nm to 688 nm. Fx transferred excitation energy to lower-energy Chl a with a time constant of 300fs. Chl c transferred excitation energy to Chl a with time constants of 500-600fs (intra-complex transfer), 600-700fs (intra-complex transfer), and 4-6ps (inter-complex transfer). The latter process made a greater contribution to total Chl c-to-Chl a transfer in intact cells of C. gracilis than in the isolated FCPII complexes. The lower-energy Chl a received excitation energy from Fx and transferred the energy to higher-energy Chl a. This article is part of a special issue entitled: photosynthesis research for sustainability: keys to produce clean energy.

  17. Effects of different concentrations of nitrogen and phosphorus on chlorophyll biosynthesis,chlorophyll a fluorescence,and photosynthesis In Larix olgensis seedlings

    Institute of Scientific and Technical Information of China (English)

    Wu Chu; Wang Zhengquan; Sun Hailong; Guo Shenglei

    2006-01-01

    In our experiments,one-year-old Larix olgensis seedlings were cultivated in sand,and supplied with solutions with different concentrations of nitrate or phosphate.The effects of nitrogen and phosphorus supply on chlorophyll biosynthesis,total nitrogen content,and photosynthetic rate were studied.The experimental results are listed below: 1) 5-aminolevulinic acid (ALA) synthetic rate increased as nitrate concentrations supplied to larch seedlings increased from 1 to 8 mmol/L.But the rate decreased by 17% when nitrate concentration increased to 16 mmol/L,in contrast to the control.Under phosphate treatments,ALA synthetic rates were similar to those under nitrate treatments.The activities of porphobilinogen (PBG)synthase reached a maximum when larch seedlings were supplied with 8 mmol/L of nitrate or 1 mmol/L of phosphate.2) When larch seedlings were supplied with 8 mmol/L of nitrate and 0.5 mmol/L of phosphate,the contents of chlorophyll a,chlorophyll b,total chlorophyll,and carotenoids reached a maximum.The total nitrogen contents in leaves increased as nitrate concentrations increased.3) When phosphate concentrations increased from 0.125 to 1 mmol/L,the total nitrogen contents in leaves slightly increased;however,continuous increase of phosphate concentrations resulted in the decrease in total nitrogen contents in leaves.When nitrate concentrations increased from 1 to 8 mmol/L,soluble protein contents in leaves increased in general,and continuous increase of nitrate concentrations induced a decrease in soluble protein contents in leaves.Under treatment of 0.25 mmol/L of phosphate,the soluble protein contents reached a maximum.4) In general,Fv/Fm increased as nitrate concentrations increased from 1 to 8 mmol/L,and continuous increase of nitrate concentration resulted in decrease in FvlFm.The similar changes occurred under phosphate treatments.As nitrate concentrations increased from 1 to 8 mmol/L,photosynthetic rates gradually increased,but when nitrate

  18. Response of bean (Vicia faba L. plants to low sink demand by measuring the gas exchange rates and chlorophyll a fluorescence kinetics.

    Directory of Open Access Journals (Sweden)

    Bo-Fang Yan

    Full Text Available BACKGROUND: The decline of photosynthesis in plants under low sink demand is well known. Previous studies focused on the relationship between stomatal conductance (gs and net photosynthetic rate (Pn. These studies investigated the effect of changes in Photosystem II (PSII function on the Pn decline under low sink demand. However, little is known about its effects on different limiting steps of electron transport chain in PSII under this condition. METHODOLOGY/PRINCIPAL FINDING: Two-month-old bean plants were processed by removing pods and flowers (low sink demand. On the 1(st day after low sink demand treatment, a decline of Pn was accompanied by a decrease in gs and internal-to-ambient CO2 concentration ratio (Ci/Ca. From the 3(rd to 9(th day, Pn and gs declined continuously while Ci/Ca ratio remained stable in the treatment. Moreover, these values were lower than that of control. Wk (a parameter reflecting the damage to oxygen evolving complex of the donor side of PSII values in the treatment were significantly higher than their corresponding control values. However, RCQA (a parameter reflecting the number of active RCs per excited cross-section of PSII values in the treatment were significantly lower than control from the 5(th day. From the 11(th to 21(st day, Pn and gs of the treatment continued to decline and were lower than control. This was accompanied by a decrease of RCQA, and an increase of Wk. Furthermore, the quantum yield parameters φPo, φEo and ψEo in the treatment were lower than in control; however, Ci/Ca values in the treatment gradually increased and were significantly higher than control on the 21(st day. CONCLUSIONS: Stomatal limitation during the early stage, whereas a combination of stomatal and non-stomatal limitation during the middle stage might be responsible for the reduction of Pn under low sink demand. Non-stomatal limitation during the late stages after the removal of the sink of roots and pods may also cause Pn

  19. Laser-Induced Breakdown Spectroscopy and Chlorophyll a Flourescence Transients

    DEFF Research Database (Denmark)

    Frydenvang, Jens

    of a sufficient quality; something that remains a problem for many in-situ methods. In my PhD, I present my work with two such in-situ methods, Laser-Induced Breakdown Spectroscopy (LIBS) and OJIP transients, the rising part of chlorophyll a fluorescence transients from dark-adapted leaves....

  20. DEVELOPMENT OF WATER QUALITY PARAMETER RETRIEVAL ALGORITHMS FOR ESTIMATING TOTAL SUSPENDED SOLIDS AND CHLOROPHYLL-A CONCENTRATION USING LANDSAT-8 IMAGERY AT POTERAN ISLAND WATER

    Directory of Open Access Journals (Sweden)

    N. Laili

    2015-10-01

    Full Text Available The Landsat-8 satellite imagery is now highly developed compares to the former of Landsat projects. Both land and water area are possibly mapped using this satellite sensor. Considerable approaches have been made to obtain a more accurate method for extracting the information of water area from the images. It is difficult to generate an accurate water quality information from Landsat images by using some existing algorithm provided by researchers. Even though, those algorithms have been validated in some water area, but the dynamic changes and the specific characteristics of each area make it necessary to get them evaluated and validated over another water area. This paper aims to make a new algorithm by correlating the measured and estimated TSS and Chla concentration. We collected in-situ remote sensing reflectance, TSS and Chl-a concentration in 9 stations surrounding the Poteran islands as well as Landsat 8 data on the same acquisition time of April 22, 2015. The regression model for estimating TSS produced high accuracy with determination coefficient (R2, NMAE and RMSE of 0.709; 9.67 % and 1.705 g/m3 respectively. Whereas, Chla retrieval algorithm produced R2 of 0.579; NMAE of 10.40% and RMSE of 51.946 mg/m3. By implementing these algorithms to Landsat 8 image, the estimated water quality parameters over Poteran island water ranged from 9.480 to 15.801 g/m3 and 238.546 to 346.627 mg/m3 for TSS and Chl-a respectively.

  1. Assessment of in vivo fluorescence method for chlorophyll-a estimation in optically complex waters (Curuai floodplain, Pará - Brazil Avaliação do método de fluorescência in vivo para a estimativa da concentração de clorofila-a em águas opticamente complexas (planície de inundação do Curuai, Pará - Brasil

    Directory of Open Access Journals (Sweden)

    Rafael Damiati Ferreira

    2012-12-01

    Full Text Available AIM: This paper describes an experiment carried out to evaluate in vivo fluorescence (IVF as an alternative method for chlorophyll-a estimation in optically complex aquatic environment (Amazon floodplain lakes METHODS: The experiment consisted of collecting in situ measurements at 26 sampling stations distributed throughout Curuai floodplain lakes. For each sampling station the following parameters were measured: temperature, turbidity, depth, Secchi depth, chlorophyll-a (Chl-a concentration, total suspended solids (TSS and dissolved organic carbon (DOC, concurrently with several transects of IVF. Two methods were tested for quantifying the fluorescence measurement to be used as input for the chlorophyll-a estimates: instantaneous IFV and average IVF. Global and regional models were tested and assessed by analyzing optically active components (Chl-a, DOC and TSS of the water. RESULTS: Regardless of fluorescence estimating method, the results indicate that it was not possible to fit a global model for estimating Chl-a from IVF for all the lakes in the Curuai floodplain. Regional models provided contrasting results according to the concentration of optically active components. The best results were observed for aquatic systems with a single dominant component homogenously distributed throughout the lake. The results highlight the influence of the ratios Chl-a/TSS, Chl-a/DOC and Phaephytin/Chl-a in the relationship between IVF and chlorophyll concentration. CONCLUSIONS: It was not possible to develop a global model to account for the entire region of Curuai floodplain. The search for regional models provided insights on the main factors affecting the relationship between IVF and Chl-a concentration. Nevertheless this work reinforces the great potential of fluorometry technique, since even with a small number of samples it was possible to set a good model in the main lake of the Curuai floodplain. In spite the fact that this is not an accurate

  2. Estimation of multiexponential fluorescence decay parameters using compressive sensing.

    Science.gov (United States)

    Yang, Sejung; Lee, Joohyun; Lee, Youmin; Lee, Minyung; Lee, Byung-Uk

    2015-09-01

    Fluorescence lifetime imaging microscopy (FLIM) is a microscopic imaging technique to present an image of fluorophore lifetimes. It circumvents the problems of typical imaging methods such as intensity attenuation from depth since a lifetime is independent of the excitation intensity or fluorophore concentration. The lifetime is estimated from the time sequence of photon counts observed with signal-dependent noise, which has a Poisson distribution. Conventional methods usually estimate single or biexponential decay parameters. However, a lifetime component has a distribution or width, because the lifetime depends on macromolecular conformation or inhomogeneity. We present a novel algorithm based on a sparse representation which can estimate the distribution of lifetime. We verify the enhanced performance through simulations and experiments.

  3. Fluorescence parameters of leaves of trees and shrubs during period of adverse weather conditions in Krasnoyarsk

    Science.gov (United States)

    Zavorueva, E. N.; Zavoruev, V. V.

    2015-11-01

    The effect of adverse weather conditions (AWC) on the fluorescence parameters of leaves Prinsepia sinensis, Amelanchier florida, Crataegus chlorocarca is obtained. However, significant changes in the fluorescence of the leaves of Acer negundo, Betula pendula under AWC were not observed.

  4. Chloroplastid pigment contents and chlorophyll a fluorescence in Amazonian tropical three species Concentração de pigmentos cloroplastídicos e fluorescência da clorofila a em espécies arbóreas tropicais da Amazônia

    Directory of Open Access Journals (Sweden)

    Ronaldo Ribeiro de Morais

    2007-10-01

    Full Text Available Plants react to changes in light and hydrological conditions in terms of quantity and composition of chloroplastidic pigments, which affects the photosynthetic properties and consequently the accumulation of plant biomass. Thus, the chloroplastidic pigment concentration and chlorophyll a fluorescence of three Amazonian species (Bertholletia excelsa, Carapa guianensis e Dipteryx odorata were investigated in sun and shade leaves form the tree crown collected during two distinct periods of precipitation (dry and rainy seasons. Pigment contents were determined by spectrophotometry and fluorescence variables were determined using a portable fluorometer. The results demonstrated that the species showed high concentrations of Chl a, Chl b e Chl total during the wet season in relation to the dry season, especially in shade leaves. A higher concentration of carotenoids was found in B. excelsa, when compared with leaves of C. guianensis and D. odorata. In leaves of B. excelsa and D. odorata no significant difference was found in relation to the photochemistry of photosystem II (Fv/Fm between the wet and dry seasons. In conclusion, the three species react differently to variations in the light and precipitation conditions regarding light capture, aspects that might be considered in the management of forest plantations.As plantas respondem a mudanças nas condições de luz e na disponibilidade hídrica em termos da quantidade e composição dos pigmentos cloroplastídicos, o que afeta as propriedades fotossintéticas e, conseqüentemente, o acúmulo de biomassa das espécies. Assim, a concentração de pigmentos cloroplastídicos e a fluorescência da clorofila a de três espécies arbóreas (Bertholletia excelsa, Carapa guianensis e Dipteryx odorata da Amazônia foi investigada em folhas sombreadas e não-sombreadas da copa das árvores e em dois períodos distintos de precipitação (chuvoso e seco. As concentrações de pigmentos foram determinadas por

  5. The chlorophyll a fluorescence induction curve in the green microalga Haematococcus pluvialis: further insight into the nature of the P-S-M fluctuation and its relationship with the "low-wave" phenomenon at steady-state.

    Science.gov (United States)

    Fratamico, Anthony; Tocquin, Pierre; Franck, Fabrice

    2016-06-01

    Chlorophyll fluorescence is an information-rich signal which provides an access to the management of light absorbed by PSII. A good example of this is the succession of fast fluorescence fluctuations during light-induced photosynthetic induction after dark-adaptation. During this period, the fluorescence trace exhibits several inflexion points: O-J-I-P-S-M-T. Whereas the OJIP part of this kinetics has been the subject of many studies, the processes that underly the PSMT transient are less understood. Here, we report an analysis of the PSMT phase in the green microalga Haematococcus pluvialis in terms of electron acceptors and light use by photochemistry, fluorescence and non-photochemical quenching (NPQ). We identify additional sub-phases between P and S delimited by an inflexion point, that we name Q, found in the second time scale. The P-Q phase expresses a transient photochemical quenching specifically due to alternative electron transport to oxygen. During the transition from Q to S, the NPQ increases and then relaxes during the S-M phase in about 1 min. It is suggested that this transient NPQ observed during induction is a high energy state quenching (qE) dependent on the alternative electron transport to molecular oxygen. We further show that this NPQ is of the same nature than the NPQ, known as the low-wave phenomenon, which is transiently observed after a saturating light pulse given at steady-state. In both cases, the NPQ is oxygen-dependent. This NPQ is observed at external pH 6.0, but not at pH 7.5, which seems correlated with faster saturation of the PQ pool at pH 6.0.

  6. Consecutive binding of chlorophylls a and b during the assembly in vitro of light-harvesting chlorophyll-a/b protein (LHCIIb).

    Science.gov (United States)

    Horn, Ruth; Grundmann, Götz; Paulsen, Harald

    2007-02-23

    The apoprotein of the major light-harvesting chlorophyll a/b complex (LHCIIb) is post-translationally imported into the chloroplast, where membrane insertion, protein folding, and pigment binding take place. The sequence and molecular mechanism of the latter steps is largely unknown. The complex spontaneously self-organises in vitro to form structurally authentic LHCIIb upon reconstituting the unfolded recombinant protein with the pigments chlorophyll a, b, and carotenoids in detergent micelles. Former measurements of LHCIIb assembly had revealed two apparent kinetic phases, a faster one (tau1) in the range of 10 s to 1 min, and a slower one (tau2) in the range of several min. To unravel the sequence of events we analysed the binding of chlorophylls into the complex by using time-resolved fluorescence measurements of resonance energy transfer from chlorophylls to an acceptor dye attached to the apoprotein. Chlorophyll a, offered in the absence of chlorophyll b, bound with the faster kinetics (tau1) exclusively whereas chlorophyll b, in the absence of chlorophyll a, bound predominantly with the slower kinetics (tau2). In double-jump experiments, LHCIIb assembly could be dissected into a faster chlorophyll a and a subsequent, predominantly slower chlorophyll b-binding step. The assignment of the faster and the slower kinetic phase to predominantly chlorophyll a and exclusively chlorophyll b binding, respectively, was verified by analysing the assembly kinetics with a circular dichroism signal in the visible domain presumably reflecting the establishment of pigment-pigment interactions. We propose that slow chlorophyll binding is confined to the exclusively chlorophyll b binding sites whereas faster binding occurs to the chlorophyll a binding sites. The latter sites can bind both chlorophylls a and b but in a reversible fashion as long as the complex is not stabilised by proper occupation of the chlorophyll b sites. The resulting two-step model of LHCIIb assembly is

  7. Photoelectrochemical Behavior of Chlorophyll a in Thin Films

    Science.gov (United States)

    Tugulea, Laura

    2001-11-01

    Chlorophyll a is the major pigment in higher plant photosynthesis, being responsible for both light absorption and light induced charge separation. The photoelectrochemical behavior of chlorophyll a species P740 (polymerized water adduct of chlorophyll a, absorbing at 740nm) was investigated using chlorophyll a thin films, electrodeposited on both Sn02 and Sn02/Ti02 electrodes. Anodic photocurrents have been observed at both Sn02 and Sn02/Ti02 electrodes with chlorophyll a film electrodeposited, under potential-controlled condition...

  8. DEVELOPMENT OF FLUORESCENCE INDICES TO MINIMISE THE EFFECTS OF CANOPY STRUCTURAL PARAMETERS

    Directory of Open Access Journals (Sweden)

    R. Colombo

    2016-05-01

    Full Text Available Remote Sensing of Sun-Induced Chlorophyll Fluorescence is a research field of growing interest with the potential to provide an improved tool for monitoring plant status and photosynthetic function. The new satellite mission of European Space Agency (the FLuorescence EXplorer, FLEX will provide the possibility to estimate canopy fluorescence from space at global level. However, remote sensing techniques allow measurement of the emitted fluorescence flux but do not provide a direct assessment of the fluorescence yield, which is the key variable linked to the physiological status of the plant. In this study, we investigate the impact of canopy structure on chlorophyll fluorescence by analysing the fluorescence emission in a thinning experiment in a corn field. It is shown that fluorescence and apparent fluorescence yield are well related with leaf area index and vegetation fractional cover, but when fluorescence is divided for a spectral vegetation index (considered as a proxy of structural parameters the correlation is lost. This means that fluorescence indexes should be considered to take into account spatial and temporal variability of biophysical parameters for satellite studies and promising for plant status applications.

  9. Light acclimation of shade-tolerant and light-resistant Tradescantia species: induction of chlorophyll a fluorescence and P700 photooxidation, expression of PsbS and Lhcb1 proteins.

    Science.gov (United States)

    Mishanin, Vladimir I; Trubitsin, Boris V; Benkov, Michael A; Minin, Andrei A; Tikhonov, Alexander N

    2016-12-01

    In this work, we have compared photosynthetic performance and expression of the PsbS and Lhcb1 proteins in two contrast ecotypes of Tradescantia species, T. fluminensis (shade-tolerant) and T. sillamontana (light-resistant), grown at two intensities of light: 50-125 μmol photons m(-2) s(-1) (low light, LL) and 875-1000 μmol photons m(-2) s(-1) (high light, HL). Using the EPR method for measuring the P700 content, we have found that LL-grown plants of both species have higher (by a factor of ≈1.7-1.8) contents of PSI per fresh weight unit as compared to HL-grown plants. Acclimation of plants to LL or HL irradiation also influences the Chl(a + b) level and expression of the PsbS and Lhcb1 proteins. Immunoblotting analysis showed that acclimation to HL stimulates (by a factor of ≈1.7-1.8) the level of PsbS related to the total number of P700 centers. In light-resistant species T. sillamontana, the ratio PsbS/P700 is about 2-times higher than in shade-tolerant species T. fluminensis grown under the same conditions. This should enhance the capacity of their leaves for protection against the light stress. In agreement with these observations, the capacity of leaves for NPQ induction was enhanced during plant acclimation to HL. Kinetic studies of P700 photooxidation and light-induced changes in the yield of Chl a fluorescence also revealed that the short-term regulation of electron transport processes in chloroplasts, which manifested themselves in the kinetics of [Formula: see text] induction and the rate of Chl a fluorescence quenching, occurred more rapidly in HL-grown plants than in LL-grown plants. Thus, both factors, enhanced expression of PsbS and more rapid response of the photosynthetic electron transport chain to dark-to-light transitions should increase the capacity of HL-grown plants for their resistance to rapid fluctuations of solar light.

  10. Analyzing the performance of fluorescence parameters in the monitoring of leaf nitrogen content of paddy rice

    Science.gov (United States)

    Yang, Jian; Gong, Wei; Shi, Shuo; Du, Lin; Sun, Jia; Song, Shalei; Chen, Biwu; Zhang, Zhenbing

    2016-06-01

    Leaf nitrogen content (LNC) is a significant factor which can be utilized to monitor the status of paddy rice and it requires a reliable approach for fast and precise quantification. This investigation aims to quantitatively analyze the correlation between fluorescence parameters and LNC based on laser-induced fluorescence (LIF) technology. The fluorescence parameters exhibited a consistent positive linear correlation with LNC in different growing years (2014 and 2015) and different rice cultivars. The R2 of the models varied from 0.6978 to 0.9045. Support vector machine (SVM) was then utilized to verify the feasibility of the fluorescence parameters for monitoring LNC. Comparison of the fluorescence parameters indicated that F740 is the most sensitive (the R2 of linear regression analysis of the between predicted and measured values changed from 0.8475 to 0.9226, and REs ranged from 3.52% to 4.83%) to the changes in LNC among all fluorescence parameters. Experimental results demonstrated that fluorescence parameters based on LIF technology combined with SVM is a potential method for realizing real-time, non-destructive monitoring of paddy rice LNC, which can provide guidance for the decision-making of farmers in their N fertilization strategies.

  11. Effects of Water Stress on Photochemical Quenching and Non-photochemical Quenching of Chlorophyll a Fluorescence in Four Tree Seedlings%水分胁迫对4种苗木叶绿素荧光的光化学淬灭和非光化学淬灭的影响

    Institute of Scientific and Technical Information of China (English)

    史胜青; 袁玉欣; 杨敏生; 梁海永; 张金香

    2004-01-01

    The changes of photochemical quenching(qp) and non-photochemical quenching(qN) of chlorophyll a fluorescence in leaves of four tree seedlings ( Gleditsia sinensis, Juglans regia, Diospyros kaki and Diospyros lotus ) were different between two different water stress ways:detached drought treatment and potted drought treatment. After 4 hours dehydration by leaf detaching,the qp values had significant decrease except J. regia, only 6 hours later, the qp values compared with contrast decreased significantly in four tree seedlings(P>0.05), but the range of reduction( G.sinensis, J.regia and D.lotus) was just 2.5% to 6.4%. D.kaki, however,got to 31.3%. While the qN values increased significantly with conducting dehydration of the detached leaves. However, the qp values of four species showed no significant decrease when they were growing in pots under soil water stress(40%~60% RWC) for 30 days; and the qN values decreased obviously with a exception in J. regia, which was consistent with that of detached leaf treatment. The results suggested that some difference or changes in mechanism of excess light energy dissipation might perform in four seedlings by short-term and long-term water stress.

  12. Parameter estimation method for blurred cell images from fluorescence microscope

    Science.gov (United States)

    He, Fuyun; Zhang, Zhisheng; Luo, Xiaoshu; Zhao, Shulin

    2016-10-01

    Microscopic cell image analysis is indispensable to cell biology. Images of cells can easily degrade due to optical diffraction or focus shift, as this results in low signal-to-noise ratio (SNR) and poor image quality, hence affecting the accuracy of cell analysis and identification. For a quantitative analysis of cell images, restoring blurred images to improve the SNR is the first step. A parameter estimation method for defocused microscopic cell images based on the power law properties of the power spectrum of cell images is proposed. The circular radon transform (CRT) is used to identify the zero-mode of the power spectrum. The parameter of the CRT curve is initially estimated by an improved differential evolution algorithm. Following this, the parameters are optimized through the gradient descent method. Using synthetic experiments, it was confirmed that the proposed method effectively increased the peak SNR (PSNR) of the recovered images with high accuracy. Furthermore, experimental results involving actual microscopic cell images verified that the superiority of the proposed parameter estimation method for blurred microscopic cell images other method in terms of qualitative visual sense as well as quantitative gradient and PSNR.

  13. Parameter Optimization of Information Channels for Laser Fluorescence Method of Vegetation Monitoring

    Directory of Open Access Journals (Sweden)

    M. L. Belov

    2015-01-01

    Full Text Available Nowadays, there is a growing interest in application of remote monitoring and accounting systems in agriculture.One of the promising areas of remote vegetation monitoring is a fluorescence analysis, as it potentially allows sensing stress of plants according to characteristics of their fluorescent radiation.The shape of the fluorescence spectra of vegetation in the normal condition differs from that of the fluorescence spectra of vegetation in stressful conditions. This potentially allows you to sence the plants by recording information about the shape of the fluorescence spectra.Analysis of the fluorescence spectrum shape can be replaced by the analysis of fluorescence intensities in several spectral bands, which simpifies problem-solving.Currently, there are various devices developed for laser fluorescence sensing of plant stress. However, a lot of issues important to the practice remain unclear.Most of these issues concern the parameters of receiving channels to record information signals, which allow you to perceve the stress-sensed plants:- how many information channels of spectral bands better to use;- what the best width of these spectral bands of information is ;- what is the best width of the spectral bands of information;- what the best threshold value for the threshold algorithm is, and if there is the better algorithm to process measurement data.The work uses mathematical modeling based on the experimentally measured fluorescence spectra to determine the optimal (in terms of probability of sensing characteristics of the stress of plants, i.e. the probability of good sense and false alarm parameters of information channels for laser fluorescence method to sense the plant stress: the central wavelength of the information spectral bands, their spectral width, and parameters of the algorithm in the case of processing two spectral channels of information. It is shown that using the additional third information spectral band allows you to

  14. The Thermocline Layer and Chlorophyll-a Concentration Variability during Southeast Monsoon in the Banda Sea

    Science.gov (United States)

    Pusparini, Nikita; Prasetyo, Budi; Ambariyanto; Widowati, Ita

    2017-02-01

    Thermocline layer and chlorophyll-a concentration can be used to investigate the upwelling region. This investigation is focused in the Banda Sea because the upwelling event in this area is quite large and has a longer upwelling duration than other waters in Indonesia. In addition, Banda Sea is also influenced by climatic factors such as monsoon. The aim of this research is to determine the validation of secondary data (from satellite imagery data and model) and in situ observation data (from research cruise) and to determine the variability of thermocline layer and chlorophyll-a concentration during Southeast Monsoon in the Banda Sea. The data used in this study were chlorophyll-a concentration, seawater vertical temperature at depths 0-400 meters, and sea surface temperature from remote sensing and in situ data. Spatial and temporal analysis of all parameters was conducted by quantitative descriptive method. The results showed that the variability of thermocline layer and the chlorophyll-a distribution were strongly related to seasonal pattern. In most cases, the estimates of thermocline layer and chlorophyll-a concentration using remote sensing algorithm were higher than in situ measured values. The greatest variability occurred in the eastern Banda Sea during the Southeast Monsoon with shallower thermocline layer, more abundance of chlorophyll-a concentration, and lower sea surface temperature.

  15. GIS based spatial distribution of Temperature and Chlorophyll-a along Kalpakkam, southeast coast of India

    Directory of Open Access Journals (Sweden)

    Muthulakshmi.AL

    2015-05-01

    Full Text Available This paper briefly describes the status of Temperature and Chlorophyll-a trend in Kalpakkam Coast, discusses its ecological and temperature impacts recommending measures to achieve long term sustainability using advanced tools like Geographic Information System (GIS. Present study reveals the monthly spatial distribution of Temperature and Chlorophyll-a at Kalpakkam. Transect based in-situ Temperature and Chlorophyll-a collected at 200m, 500m and 1 km distance into the sea was interpolated using the Inverse Distance Weightage (IDW method in ARC GIS. Data revealed the extent of spatial distribution of thermal effluent in Kalpakkam. It could be found that temperature range of 26.2 – 31.9°C provided substantial Chlorophyll-a concentration between 0.8 – 2.9 mg/m3 for surface and bottom waters. Further, increase of Chlorophyll-a levels did not lead to higher productivity. Combined temperature and chlorophyll a showed little synergistic effects. It is concluded that the effect of thermal discharge from the power plant into the receiving water body is quite localized and productivity of the coastal waters are not affected. From the results obtained, the spatial data has been found to be useful in determining zones of safe use of seawater and to understand the extent of relationship between the relatable parameters.

  16. Chlorophyll a fluorescence to phenotype wheat genotypes for heat tolerance

    DEFF Research Database (Denmark)

    Sharma, Dew Kumari; Andersen, Sven Bode; Ottosen, Carl-Otto

    Wheat (Triticum aestivum L.) is a heat-susceptible crop throughout its phenological stages, flowering phase being the most sensitive stage. Early stress detection method with advanced physiological measurements may provide new dimensions to establish a high throughput phenotyping technique...... yield efficiency of PSII photochemistry (Fv/Fm). We subsequently used this standardized protocol for mass screening of wheat genotypes. Our results showed that the temperature of 40°C in 300 µmol m-2s-1 light for 72 h was appropriate to induce heat stress to reveal genetic variation among genotypes...

  17. Validation of MODIS FLH and In Situ Chlorophyll a from Tampa Bay, Florida (USA)

    Science.gov (United States)

    Fischer, Andrew; MorenoMadrinan, Max J.

    2012-01-01

    Satellite observation of phytoplankton concentration or chlorophyll-a (chla) is an important characteristic, critically integral to monitoring coastal water quality. However, the optical properties of estuarine and coastal waters are highly variable and complex and pose a great challenge for accurate analysis. Constituents such as suspended solids and dissolved organic matter and the overlapping and uncorrelated absorptions in the blue region of the spectrum renders the blue-green ratio algorithms for estimating chl-a inaccurate. Measurement of suninduced chlorophyll fluorescence, on the other hand, which utilizes the near infrared portion of the electromagnetic spectrum may, provide a better estimate of phytoplankton concentrations. While modelling and laboratory studies have illustrated both the utility and limitations of satellite algorithms based on the sun induced chlorophyll fluorescence signal, few have examined the empirical validity of these algorithms or compared their accuracy against bluegreen ratio algorithms . In an unprecedented analysis using a long term (2003-2011) in situ monitoring data set from Tampa Bay, Florida (USA), we assess the validity of the FLH product from the Moderate Resolution Imaging Spectrometer against a suite of water quality parameters taken in a variety of conditions throughout this large optically complex estuarine system. . Overall, the results show a 106% increase in the validity of chla concentration estimation using FLH over the standard chla estimate from the blue-green OC3M algorithm. Additionally, a systematic analysis of sampling sites throughout the bay is undertaken to understand how the FLH product responds to varying conditions in the estuary and correlations are conducted to see how the relationships between satellite FLH and in situ chlorophyll-a change with depth, distance from shore, from structures like bridges, and nutrient concentrations and turbidity. Such analysis illustrates that the correlations between

  18. Mirror symmetry and vibrational structure in optical spectra of chlorophyll a.

    Science.gov (United States)

    Rätsep, Margus; Linnanto, Juha; Freiberg, Arvi

    2009-05-21

    The absorption and fluorescence emission spectra of chlorophyll a in different organic solvents where the central Mg atom is either penta- or hexacoordinated have been studied using conventional and selective spectroscopy methods at ambient and cryogenic temperatures. A breakdown of the basic model mirror-symmetry rule in relation to the lowest-energy Q(y) transitions was observed due to Franck-Condon and Hertzberg-Teller interactions. Detailed vibrational structure in the ground electronic state, virtually independent of the Mg coordination state, was revealed by hole-burning fluorescence line-narrowing technique. The total Huang-Rhys factor associated with the linear vibronic coupling strength of the solvent collective vibrations and the local chlorophyll a intramolecular vibrations is equal to 0.53+/-0.07 in fluorescence and to 0.39+/-0.05 in absorption. The electron-phonon coupling part was also found to depend on the excitation wavelength within the inhomogeneously broadened absorption origin band, its average value being S(ph) approximately = 0.38. All these numbers qualify for the weak vibronic coupling. A comparison of the conjugate Q(y) absorption and fluorescence emission spectra as well as the temperature dependence of the absorption spectra allowed unambiguous locating of the still controversial Q(x) absorption band position for penta- and hexacoordinated chlorophyll a species. The basic experimental findings have been qualitatively supported by semiempirical quantum chemical calculations.

  19. New insights in the interpretation of tryptophan fluorescence : origin of the fluorescence lifetime and characterization of a new fluorescence parameter in proteins: the emission to excitation ratio.

    Science.gov (United States)

    Albani, J R

    2007-07-01

    Origin of tryptophan fluorescence is still up to these days a quiz which is not completely solved. Fluorescence emission properties of tryptophan within proteins are in general considered as the result of fluorophore interaction within its environment. For example, a low fluorescence quantum yield is supposed to be the consequence of an important fluorophore-environment interaction. However, are we sure that the fluorophore has been excited upon light absorption? What if fluorophore excitation did not occur as the result of internal conformation specific to the fluorophore environment? Are we sure that all absorbed energy is used for the excitation process? Fluorescence lifetimes of Trp residues are considered to originate from rotamers or conformers resulting from the rotation of the indole ring within the peptide bonds. However, how can we explain the fact that in most of the proteins, the two lifetimes 0.5 and 3 ns, attributed to the conformers, are also observed for free tryptophan in solution? The present work, performed on free tryptophan and tyrosine in solution and on different proteins, shows that absorption and excitation spectra overlap but their intensities at the different excitation wavelengths are not necessarily equal. Also, we found that fluorescence emission intensities recorded at different excitation wavelengths depend on the intensities at these excitation wavelengths and not on the optical densities. Thus, excitation is not equal to absorption. In our interpretation of the data, we consider that absorbed photons are not necessary used only for the excitation, part of them are used to reorganize fluorophore molecules in a new state (excited structure) and another part is used for the excitation process. A new parameter that characterizes the ratio of the number of emitted photons over the real number of photons used to excite the fluorophore can be defined. We call this parameter, the emission to excitation ratio. Since our results were

  20. Assessment of remotely sensed chlorophyll-a concentration in Guanabara Bay, Brazil

    Science.gov (United States)

    Oliveira, Eduardo N.; Fernandes, Alexandre M.; Kampel, Milton; Cordeiro, Renato C.; Brandini, Nilva; Vinzon, Susana B.; Grassi, Renata M.; Pinto, Fernando N.; Fillipo, Alessandro M.; Paranhos, Rodolfo

    2016-04-01

    The Guanabara Bay (GB) is an estuarine system in the metropolitan region of Rio de Janeiro (Brazil), with a surface area of ˜346 km2 threatened by anthropogenic pressure. Remote sensing can provide frequent data for studies and monitoring of water quality parameters, such as chlorophyll-a concentration (Chl-a). Different combination of Medium Resolution Imaging Spectrometer (MERIS) remote sensing reflectance band ratios were used to estimate Chl-a. Standard algorithms such as Ocean Color 3-band, Ocean Color-4 band, fluorescence line height, and maximum chlorophyll index were also tested. The MERIS Chl-a estimates were statistically compared with a dataset of in situ Chl-a (2002 to 2012). Good correlations were obtained with the use of green, red, and near-infrared bands. The best performing algorithm was based on the red (665 nm) and green (560 nm) band ratio, named "RG3" algorithm (r2=0.71, chl-a=62,565*x1.6118). The RG3 was applied to a time series of MERIS images (2003- to 2012). The GB has a high temporal and spatial variability of Chl-a, with highest values found in the wet season (October to March) and in some of the most internal regions of the estuary. Lowest concentrations are found in the central circulation channel due to the flushing of ocean water masses promoted by pumping tide.

  1. A Fundamental Parameter-Based Calibration Model for an Intrinsic Germanium X-Ray Fluorescence Spectrometer

    DEFF Research Database (Denmark)

    Christensen, Leif Højslet; Pind, Niels

    1982-01-01

    secondary target a number of relative calibration constants are calculated on the basis of knowledge of the irradiation geometry, the detector specifications, and tabulated fundamental physical parameters. The absolute calibration of the spectrometer is performed by measuring one pure element standard per......A matrix-independent fundamental parameter-based calibration model for an energy-dispersive X-ray fluorescence spectrometer has been developed. This model, which is part of a fundamental parameter approach quantification method, accounts for both the excitation and detection probability. For each...

  2. Statistical characteristics of chlorophyll-a concentration in Hong Kong′s coastal waters

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    In this paper seven of the ten Water Control Zones (WCZs) in Hong Kong′s coastal waters with monthly or bi-weekly sampling data of 17 parameters collected at 37 monitoring stations from 1988 to 1999 were selected to analyze the spatial and temporal variations of chlorophyll-a and its influencing factors. Cluster analysis was employed to group the monitoring stations based on the structure of the data set. Multiple step regression was employed to determine the significant influencing factors of chlorophyll-a level. The results suggest that all the monitoring stations could be grouped into two clusters. Cluster I with frequent red tide incidents comprises two WCZs which aresemi-enclosed bays. Cluster II with less red tide occurrence comprises the other five WCZs in an estuarine environment in the west. For both clusters, the organic contents indicator, BOD5, was a common significant influencing factor of the chlorophyll-a level. Nitrogen and light penetration condition related to turbidity, total volatile solids and suspended solids had more influence on the cholophyll-a level in Cluster I than in Cluster II, while phosphorus and oceanographic conditions associated with salinity, temperature, dissolved oxygen and pH were more important in Cluster II than in Cluster 1. Generally, there was a higher average chlorophyll-a level in winter and autumn in a year.The chlorophyll-a level was much higher in Cluster I than in Cluster II among all seasons. Although the chlorophyll-a concentration had great variations from place to place in Hong Kong′s coastal waters, it seemed to have a common long term fluctuation period of 8-10 years with a high-low-high variation in the period in the whole region, which might be influenced by other factors of global scale.

  3. New Fluorescence Parameters for the Determination of QA Redox State and Excitation Energy Fluxes.

    Science.gov (United States)

    Kramer, David M; Johnson, Giles; Kiirats, Olavi; Edwards, Gerald E

    2004-02-01

    A number of useful photosynthetic parameters are commonly derived from saturation pulse-induced fluorescence analysis. We show, that qP, an estimate of the fraction of open centers, is based on a pure 'puddle' antenna model, where each Photosystem (PS) II center possesses its own independent antenna system. This parameter is incompatible with more realistic models of the photosynthetic unit, where reaction centers are connected by shared antenna, that is, the so-called 'lake' or 'connected units' models. We thus introduce a new parameter, qL, based on a Stern-Volmer approach using a lake model, which estimates the fraction of open PS II centers. We suggest that qL should be a useful parameter for terrestrial plants consistent with a high connectivity of PS II units, whereas some marine species with distinct antenna architecture, may require the use of more complex parameters based on intermediate models of the photosynthetic unit. Another useful parameter calculated from fluorescence analysis is ΦII, the yield of PS II. In contrast to qL, we show that the ΦII parameter can be derived from either a pure 'lake' or pure 'puddle' model, and is thus likely to be a robust parameter. The energy absorbed by PS II is divided between the fraction used in photochemistry, ΦII, and that lost non-photochemically. We introduce two additional parameters that can be used to estimate the flux of excitation energy into competing non-photochemical pathways, the yield induced by downregulatory processes, ΦNPQ, and the yield for other energy losses, ΦNO.

  4. Behavior of Sethoxydim Alone or in Combination with Turnip Oils on Chlorophyll Fluorescence Parameter

    Directory of Open Access Journals (Sweden)

    Hossein HAMMAMI

    2014-03-01

    Full Text Available Sethoxydim is an acetyl-coenzyme A carboxylase (ACCase inhibitor that changed the shape of the chlorophyll fluorescence curve (kautsky curve in wild oat (Avena ludoviciana Durieu. in greenhouse experiment. This experiment was conducted as completely randomized factorial design with three replications at the College of Agriculture, Ferdowsi University of Mashhad, Iran, during 2012. Results of this study revealed that sethoxydim only and plus emulsifiable turnip oil changed the shape of the chlorophyll fluorescence curve (kautsky curve 7 days after spraying. Sethoxydim plus emulsifiable turnip oil changed the shape of the kautsky curve more than for sethoxydim only. We found that in our study the fv/fm (maximum quantum efficiency was closely linked to the fresh and dry weight dose-response. Sethoxydim plus emulsifiable turnip oil proved more rapidly effect on fv/fm in comparison with sethoxydim only. The fresh and dry weight dose-response relationship with fv/fm showed a similar behavior. This study revealed a good relation between fresh and dry weight according with values of 28 DAS and fv/fm 7 DAS. In general, the findings of this study revealed that Fv/Fm is a good parameter for evaluating effect of sethoxydim little time after spraying. Also, this research showed that 4 folds more time for classical screening methods comparing to chlorophyll fluorescence method. Thereupon, classical screening methods may be replaced by chlorophyll fluorescence method in future.

  5. Simplified, rapid, and inexpensive estimation of water primary productivity based on chlorophyll fluorescence parameter Fo.

    Science.gov (United States)

    Chen, Hui; Zhou, Wei; Chen, Weixian; Xie, Wei; Jiang, Liping; Liang, Qinlang; Huang, Mingjun; Wu, Zongwen; Wang, Qiang

    2017-04-01

    Primary productivity in water environment relies on the photosynthetic production of microalgae. Chlorophyll fluorescence is widely used to detect the growth status and photosynthetic efficiency of microalgae. In this study, a method was established to determine the Chl a content, cell density of microalgae, and water primary productivity by measuring chlorophyll fluorescence parameter Fo. A significant linear relationship between chlorophyll fluorescence parameter Fo and Chl a content of microalgae, as well as between Fo and cell density, was observed under pure-culture conditions. Furthermore, water samples collected from natural aquaculture ponds were used to validate the correlation between Fo and water primary productivity, which is closely related to Chl a content in water. Thus, for a given pure culture of microalgae or phytoplankton (mainly microalgae) in aquaculture ponds or other natural ponds for which the relationship between the Fo value and Chl a content or cell density could be established, Chl a content or cell density could be determined by measuring the Fo value, thereby making it possible to calculate the water primary productivity. It is believed that this method can provide a convenient way of efficiently estimating the primary productivity in natural aquaculture ponds and bringing economic value in limnetic ecology assessment, as well as in algal bloom monitoring.

  6. Relationship between chlorophyll-a and column primary production

    Digital Repository Service at National Institute of Oceanography (India)

    Dalal, S.G.; Bhargava, R.M

    Relationship between surface chlorophyll a and column primary production has been established to help in estimating the latter more quickly and accurately. The equation derived is Primary Production, y = 0.54 Ln Chl a - 0.6. The relationship...

  7. Hyperspectral Reflectance and Fluorescence Indices for Carbon Related Parameters in Corn Crops

    Science.gov (United States)

    Middleton, E. M.; Corp, L. A.; Campbell, P. E.; Daughtry, C. S.

    2006-05-01

    The relative success in monitoring physiological or stand properties related to carbon (C) assimilation using narrow band (hyperspectral) reflectance and fluorescence indices was evaluated at leaf and canopy levels for mature corn crops (Zea mays L.) in two years. The corn crops were arranged in plots, each receiving a controlled nitrogen (N) fertilization regime at one of four dosages in experiments conducted in 2004 and 2005 at the USDA facility in Beltsville, MD, USA. Leaf reflectance spectra were obtained in conjunction with leaf level photosynthesis, chlorophyll fluorescence (ChlF), and chemistry (chlorophyll and carotenoid content per leaf area; percent C and N by dry mass). Whole plant canopy spectra and leaf area index data were obtained the same week as leaf measurements, followed by determinations of yields and biomass at harvest. The spectra were acquired using a spectroradiometer (ASD-FR FieldSpec Pro, Analytical Spectral Devices, Inc., Boulder, CO, USA), either coupled with a hemisphere for leaf optical properties or to measure nadir radiances 1 m above plant canopies within a 22o field of view. In situ photosynthesis and ChlF parameters were determined simultaneously with a photosynthetic system (Li-Cor 6400, Lincoln, Nebraska, USA) fitted with a fluorimeter under controlled conditions (temperature, irradiance, carbon dioxide, and humidity). Canopy-level steady state ChlF emissions were extracted from the apparent canopy reflectance spectra at 688 and 760 nm using the Fraunhofer Line Depth (FLD) principal. Both fluorescence and reflectance indices were successful in discriminating foliar constituents (e.g., pigment ratios, C/N ratios) but only fluorescence indices were correlated with light use efficiency (LUE) and corn yields in both years. LUE was inversely correlated (r = 0.85) with the ratio of non-photochemical (Qn) to photochemical (Qp) quenching of ChlF, (Qn/Qp). LUE was not strongly influenced by pigment levels, including the chlorophyll

  8. Internal Conversion Process of Chlorophyll a in Solvents in Femtosecond Pump-Probe Laser Fields

    Institute of Scientific and Technical Information of China (English)

    Kai Niu; Li-qing Dong; Shu-lin Cong

    2008-01-01

    The internal conversion (IC) processes of chlorophyll a (chl-a) in solvents are studied based on the reduced density matrix theory. The IC times can be obtained by simulating the experimental fluorescence depletion spectra (FDS). The calculated IC times of chl-a in ethyl acetate, tetrahydrofuran and dimethyl formamide are 141, 147, and 241 fs, respectively. The oscillation feature of the FDS results from the forward and backward transfer of the population between coupled electronic states. The effects of diabatic coupling between two electronic states on the IC time and the FDS are described. The influence of molecule-reservoir coupling on the IC time is also investigated.

  9. Membrane order parameters for interdigitated lipid bilayers measured via polarized total-internal-reflection fluorescence microscopy.

    Science.gov (United States)

    Ngo, An T; Jakubek, Zygmunt J; Lu, Zhengfang; Joós, Béla; Morris, Catherine E; Johnston, Linda J

    2014-11-01

    Incorporating ethanol in lipid membranes leads to changes in bilayer structure, including the formation of an interdigitated phase. We have used polarized total-internal-reflection fluorescence microscopy (pTIRFM) to measure the order parameter for Texas Red DHPE incorporated in the ethanol-induced interdigitated phase (LβI) formed from ternary lipid mixtures comprising dioleoylphosphatidylcholine, cholesterol and egg sphingomyelin or dipalmitoylphosphatidylcholine. These lipid mixtures have 3 co-existing phases in the presence of ethanol: liquid-ordered, liquid-disordered and LβI. pTIRFM using Texas Red DHPE shows a reversal in fluorescence contrast between the LβI phase and the surrounding disordered phase with changes in the polarization angle. The contrast reversal is due to changes in the orientation of the dye, and provides a rapid method to identify the LβI phase. The measured order parameters for the LβI phase are consistent with a highly ordered membrane environment, similar to a gel phase. An acyl-chain labeled BODIPY-FL-PC was also tested for pTIRFM studies of ethanol-treated bilayers; however, this probe is less useful since the order parameters of the interdigitated phase are consistent with orientations that are close to random, either due to local membrane disorder or to a mixture of extended and looping conformations in which the fluorophore is localized in the polar headgroup region of the bilayer. In summary, we demonstrate that order parameter measurements via pTIRFM using Texas Red-DHPE can rapidly identify the interdigitated phase in supported bilayers. We anticipate that this technique will aid further research in the effects of alcohols and other additives on membranes.

  10. Modeling of estuarne chlorophyll a from an airborne scanner

    Science.gov (United States)

    Khorram, Siamak; Catts, Glenn P.; Cloern, James E.; Knight, Allen W.

    1987-01-01

    Near simultaneous collection of 34 surface water samples and airborne multispectral scanner data provided input for regression models developed to predict surface concentrations of estuarine chlorophyll a. Two wavelength ratios were employed in model development. The ratios werechosen to capitalize on the spectral characteristics of chlorophyll a, while minimizing atmospheric influences. Models were then applied to data previously acquired over the study area thre years earlier. Results are in the form of color-coded displays of predicted chlorophyll a concentrations and comparisons of the agreement among measured surface samples and predictions basedon coincident remotely sensed data. The influence of large variations in fresh-water inflow to the estuary are clearly apparent in the results. The synoptic view provided by remote sensing is another method of examining important estuarine dynamics difficult to observe from in situ sampling alone.

  11. Alloying effect on K-shell fluorescence parameters of porous NiTi shape memory alloys

    Energy Technology Data Exchange (ETDEWEB)

    Cengiz, E., E-mail: erhan_cengiz@ktu.edu.tr [Karadeniz Technical University, Science Faculty, Department of Physics, 61080 Trabzon (Turkey); Ozkendir, O.M. [Mersin University, Tarsus Faculty of Technology, Tarsus (Turkey); Kaya, M. [Adiyaman University, Department of Material Science Engineering, 02040 Adiyaman (Turkey); Tirasoglu, E. [Karadeniz Technical University, Science Faculty, Department of Physics, 61080 Trabzon (Turkey); Karahan, I.H. [Mustafa Kemal University, Faculty of Arts and Sciences, Department of Physics, Antakya, Hatay (Turkey); Kimura, S.; Hajiri, T. [UVSOR Facility, Institute for Molecular Science, Okazaki 444-8585 (Japan)

    2014-01-01

    Highlights: • The K{sub α,β} shell production cross-sections and K{sub β}/K{sub α} intensity ratios of porous NiTi SMAs were determined by ED-XRF. • To analyze the changes in the structures due to the preheating and solution heat treatment processes, XRD and XPS measurements were also performed. • The deviations between the experimental and theoretical were interpreted to charge transfer phenomena. - Abstract: The K{sub α,β} shell production cross-sections and K{sub β}/K{sub α} intensity ratios of porous Ni −49 at% Ti shape memory alloys were determined using energy dispersive X-ray fluorescence (EDXRF) technique. Also, the alloying effect on the K shell fluorescence parameters was investigated. The samples were excited by 59.5 keV γ-rays from an {sup 241}Am annular radioactive source. The K X-rays emitted by the samples were counted by an Ultra-LEGe detector with a resolution of 150 eV at 5.9 keV. The structure analyses of the samples were also made using X-ray diffraction (XRD) and X-ray photoelectron spectroscopy (XPS). The deviations between the present results and theoretical values, calculated for pure Ti and Ni, were attributed to charge transfer phenomena and/or rearrangement of valance shell electrons and porosity.

  12. Full-direct method for imaging pharmacokinetic parameters in dynamic fluorescence molecular tomography

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Guanglei, E-mail: guangleizhang@bjtu.edu.cn [Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing 100084 (China); Department of Biomedical Engineering, School of Computer and Information Technology, Beijing Jiaotong University, Beijing 100044 (China); Pu, Huangsheng; Liu, Fei; Bai, Jing [Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing 100084 (China); He, Wei [China Institute of Sport Science, Beijing 100061 (China); Luo, Jianwen, E-mail: luo-jianwen@tsinghua.edu.cn [Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing 100084 (China); Center for Biomedical Imaging Research, School of Medicine, Tsinghua University, Beijing 100084 (China)

    2015-02-23

    Images of pharmacokinetic parameters (also known as parametric images) in dynamic fluorescence molecular tomography (FMT) can provide three-dimensional metabolic information for biological studies and drug development. However, the ill-posed nature of FMT and the high temporal variation of fluorophore concentration together make it difficult to obtain accurate parametric images in small animals in vivo. In this letter, we present a method to directly reconstruct the parametric images from the boundary measurements based on hybrid FMT/X-ray computed tomography (XCT) system. This method can not only utilize structural priors obtained from the XCT system to mitigate the ill-posedness of FMT but also make full use of the temporal correlations of boundary measurements to model the high temporal variation of fluorophore concentration. The results of numerical simulation and mouse experiment demonstrate that the proposed method leads to significant improvements in the reconstruction quality of parametric images.

  13. [Effects of simulating acid rain on photosynthesis and chlorophyll fluorescence parameters of Quercus glauca Quercus glauca].

    Science.gov (United States)

    Wang, Sai; Yi, Li-Ta; Yu, Shu-Quan; Zhang, Chao; Shi, Jing-Jing

    2014-08-01

    At three levels of simulated acid rainfall intensities with pH values of 2.5 (severe), 40 (medium) and 5.6 (light) respectively, the responses of chlorophyll fluorescence and photosynthetic parameters of Quercus glauca seedlings were studied in three acid rainfall treatments, i. e. only the aboveground of seedlings exposed to acid rain (T1), both of the seedlings and soil exposed to acid rain (T2), only the soil exposed to acid rain (T3) compared with blank control (CK). Under the severe acid rainfall, T1 significantly inhibited chlorophyll synthesis, and thus reduced the primary photochemical efficiency of PS II ( F(v)/F(m)), potential activity of PS II (F(v)/F(o)) , apparent quantum (Y), net photosynthetic rate (P(n)), and transpiration rate (T(r)), but increased the light compensation point (LCP) and dark respiration rate (R(d)) of Q. glauca seedlings. T2 inhibited, but T3 played a little enhancement on the aforementioned parameters of Q. glauca seedlings. Under the conditions of medium and light acid rainfall intensities, the above parameters in the three treatments were higher than that of CK, except with lower R(d). The chlorophyll fluorescence and photosynthetic parameters showed a similar tendency in the three treatments, i. e. T2>T3 >T1. It indicated that T1 had the strongest inhibition on seedlings in condition of the severe acid rainfall, while T2 had the most dramatic facilitating effect on seedlings under the medium and light acid rainfall. Intensity of acid rainfall had significant influences on SPAD, F(v)/F(m), F(v)/F(o), Y, P(n), T(r), and maximum photosynthetic rate (A(max)), whereas treatments of acid rainfall affected SPAD, F(v)/F(m), Y, P(n), T(r), A(max) and light saturation point (LSP). The interaction of acid rainfall intensities and treatments played significant effects on SPAD, F(v)/F(m), Y, P(n) and A(max).

  14. Relationship between chlorophyll a concentration, light attenuation and diving depth of the Southern elephant seal Mirounga leonina.

    Directory of Open Access Journals (Sweden)

    Thomas Jaud

    Full Text Available Recently, a number of Antarctic marine environmental studies have used oceanographic parameters collected from instrumented top predators for ecological and physical information. Phytoplankton concentration is generally quantified through active measurement of chlorophyll fluorescence. In this study, light absorption coefficient (K(0.75 was used as an indicator of phytoplankton concentration. This measurement, easy to obtain and requiring low electric power, allows for assessing of the fine scale horizontal structuring of phytoplankton. As part of this study, Southern elephant seals (SES were simultaneously equipped with a fluorometer and a light logger. Along the SES tracks, variations in K(0.75 were strongly correlated with chlorophyll, a concentration measured by the fluorometer within the euphotic layer. With regards to SES foraging behaviour, bottom depth of the seal's dive was highly dependent on light intensity at 150 m, indicating that the vertical distribution of SES's prey such as myctophids is tightly related to light level. Therefore, change in phytoplankton concentration may not only have a direct effect on SES's prey abundance but may also determine their vertical accessibility with likely consequences on SES foraging efficiency.

  15. Combined processing and mutual interpretation of radiometry and fluorimetry from autonomous profiling Bio-Argo floats: Chlorophyll a retrieval

    Science.gov (United States)

    Xing, Xiaogang; Morel, André; Claustre, Hervé; Antoine, David; D'Ortenzio, Fabrizio; Poteau, Antoine; Mignot, Alexandre

    2011-06-01

    Eight autonomous profiling floats equipped with miniaturized radiometers and fluorimeters have collected data in Pacific, Atlantic, and Mediterranean offshore zones. They measured in particular 0-400 m vertical profiles of the downward irradiance at three wavelengths (412, 490, and 555 nm) and of the chlorophyll a fluorescence. Such autonomous sensors collect radiometric data regardless of sky conditions and collect essentially uncalibrated fluorescence data. Usual processing and calibration techniques are no longer usable in such remote conditions and have to be adapted. The proposition here is an interwoven processing by which missing parts of irradiance profiles (due to intermittent cloud occurrence) are interpolated by accounting for possible changes in optical properties (detected by the fluorescence signal) and by which the attenuation coefficient for downward irradiance, used as proxy for [Chl a] (the chlorophyll a concentration), allows the fluorescence signal to be calibrated in absolute units (mg m-3). This method is successfully applied to about 600 irradiance and fluorescence profiles. Validation of the results in terms of [Chl a] is made by matchup with satellite (MODIS-A) chlorophyll (24.3% RMSE, N = 358). Validation of the method is obtained by applying it on similar field data acquired from ships, which, in addition to irradiance and fluorescence profiles, include the [Chl a] HPLC determination, used for final verification.

  16. A light-harvesting siphonaxanthin-chlorophyll a/b-protein complex of marine green alga,Bryopsis corticulans

    Institute of Scientific and Technical Information of China (English)

    CHEN Hui; SHEN Shihua; HE Junfang; LENG Jing; LI Liangbi; KUANG Tingyun

    2004-01-01

    A light-harvesting chlorophyll a/b-protein complex (LHCP) was isolated directly from thylakoid membranes of marine green alga, Bryopsis corticulans, by two consecutive runs of liquid chromatography. The trimeric form of the light-harvesting complex has been obtained by sucrose gradient ultracentrifugation. The result of SDSPAGE shows that the light-harvesting complex is composed of at least five apoproteins in which a protein with apparent molecular weight of about 31 kD was never found in the major light-harvesting complex (LHC Ⅱ) from higher plants.The isolated Bryopsis corticulans light-harvesting complex contains a specific carotenoid, siphonaxanthin, as well as chlorophyll (Chl) a, Chl b, neoxanthin and violaxanthin. Siphonaxanthin which is present in the light-harvesting siphonaxanthin-chlorophyll a/b-protein complex of Bryopsis corticulans is responsible for enhanced absorption in the blue-green region (530 nm). Efficient energy transfer from both siphonaxanthin and Chl b to Chl a in Bryopsis corticulans LHCP, which has similar absorption and fluorescence emission spectra to those of the lutein-chlorophyll a/b-protein of higher plants, proved that molecular arrangement of the light-harvesting pigments was highly ordered in the Bryopsis corticulans LHCP. The siphonaxanthin-chlorophyll a/b-proteins allow enhanced absorption of blue-green light, the predominant light available in deep ocean waters or shaded subtidal marine habitats.

  17. Fundamental parameter based quantification algorithm for confocal nano-X-ray fluorescence analysis

    Energy Technology Data Exchange (ETDEWEB)

    Schoonjans, Tom, E-mail: Tom.Schoonjans@UGent.be [X-ray Microspectroscopy and Imaging Research Group (XMI), Department of Analytical Chemistry, Ghent University, Krijgslaan 281 S12, B-9000 Ghent (Belgium); Silversmit, Geert; Vekemans, Bart [X-ray Microspectroscopy and Imaging Research Group (XMI), Department of Analytical Chemistry, Ghent University, Krijgslaan 281 S12, B-9000 Ghent (Belgium); Schmitz, Sylvia [Geosciences Institute/Mineralogy, Goethe University Frankfurt, Altenhoeferallee 1, D-60438 Frankfurt (Germany); Burghammer, Manfred; Riekel, Christian [ESRF, 6 rue Jules Horowitz, BP220, F-38043 Grenoble Cedex (France); Brenker, Frank E. [Geosciences Institute/Mineralogy, Goethe University Frankfurt, Altenhoeferallee 1, D-60438 Frankfurt (Germany); Vincze, Laszlo, E-mail: Laszlo.Vincze@UGent.be [X-ray Microspectroscopy and Imaging Research Group (XMI), Department of Analytical Chemistry, Ghent University, Krijgslaan 281 S12, B-9000 Ghent (Belgium)

    2012-01-15

    A new method for the quantification of X-ray fluorescence (XRF) was derived based on the fundamental parameter method (FPM). The FPM equations were adapted to accommodate the special case of confocal nano-XRF, i.e. X-ray nano-beam excitation coupled with confocal detection, taking into account the special characteristics of the detector channel polycapillary. A thorough error estimation algorithm based on the Monte Carlo method was applied, producing a detailed analysis of the uncertainties of the quantification results. The new FPM algorithm was applied on confocal nano-XRF data obtained from cometary dust returned by NASA's Stardust mission, recorded at beamline ID13 of the European Synchrotron Radiation Facility. - Highlights: Black-Right-Pointing-Pointer A new method for the quantification of confocal XRF is presented. Black-Right-Pointing-Pointer The quantification is based on the fundamental parameter method (FPM). Black-Right-Pointing-Pointer The new FPM algorithm was applied for the analysis of unique cometary dust particles. Black-Right-Pointing-Pointer The cometary particles were returned by NASA's Stardust mission in 2006. Black-Right-Pointing-Pointer Error estimation is based on the Monte Carlo method.

  18. Chlorophyll a and primary production in the northeastern Pacific Ocean

    Institute of Scientific and Technical Information of China (English)

    HEN Xingqun; LIN Rongeheng

    2008-01-01

    The primary production and chlorophyll a concentration of picoplankton (0.2~2μm),nanoplankton (2~20 μm) and micro- plankton (20~200 μm) are described in the northeastern Pacific Ocean near the Hawaii Islands during the six survey cruises from 1996 to 2003:DY85-4,DY95-7,DY95-8,DY95-10,DY105-11 and DY105-12.14.The primary production of carbon was in range from 76.8 to 191.9 mg/(m2·d) with an average of 116.1 mg/( m2·d) in the east region,and from 73.1 to 222.5 mg/(m2·d) with an average of 127.1 mg/( m2·d) in the west region,similar to the other oligotrophic regions of the Pacific Ocean investigated.The chlorophyll a concentration was about 0.1 mg/m3 from the surface to the 50 m depth,about 0.2-0.4 mg/m3from 50 to 100 m,and gradually decreased below the 100 m depth.The picoplankton accounted for more than 70% of the total chlorophyll a in the upper layer (surface to 125 m),but it decreased to less than 50% in depth below 125 m.The na- noplankton and microplankton combined only accounted for less than 30% of the total chlorophyll a in the upper layer,but showed a more even vertical distribution.

  19. A study of the low-lying singlet and triplet electronic states of chlorophyll A and B

    Directory of Open Access Journals (Sweden)

    Etinski Mihajlo

    2013-01-01

    Full Text Available Chlorophylls have been extensively investigated both experimentally and theoretically owing to the fact that they are essential for photosynthesis. We have studied two forms of chlorophyll, chlorophyll a and chlorophyll b, by means of density functional theory. Optimization of S0, S1 and T1 states was performed with the B3-LYP functional. The computed fluorescence lifetimes show good agreement with the available experimental data. The electronic adiabatic energies of S1 and T1 states are 2.09/2.12 and 1.19/1.29 eV for chlorophyll a and chlorophyll b respectively. We discussed the implications of this results on the triplet formation. Also, the calculated vertical ionization potentials shows good agreement with the experimental results. [Projekat Ministarstva nauke Reoublike Srbije, br. 172040

  20. Parameter Difference of Chlorophyll Fluorescence in Leaves of Different Cultivars of Lycium barbarum%不同枸杞品种叶绿素荧光参数差异分析

    Institute of Scientific and Technical Information of China (English)

    杨娟; 王有科; 李捷; 陈娜; 李小刚; 张晓娜

    2014-01-01

    In this research,some cultivars of Lycium barbarum were taken as the materials.In the field experiment,the chlorophyll fluorescence parameters and the chlorophyll contents in the cultivars of L.barbarum were studied using the chlorophyll fluorescence measuring technique.The results revealed that the maximal photochemical efficiency of PS Ⅱ (Fv/Fm) and potential activity of PS Ⅱ (Fv/Fo) of Ningqi No.2 were remarkably higher than those of other three cultivars.The actual photosynthesis yield (Y(Ⅱ)),activity photosynthesis yield (Fv'/ Fm'),photochemical quenching (qP) and electron transport rate (ETR) were significantly different from different cultivars under a photo synthetically active radiation of 0-2 847 μmol · m-2 · s-1,and they were the highest in Ningqi No.2,followed by Mengqi No.1 and Damaye,and the lowest in Ningqi No.1.The initial slope α of fitting parameter ETR was similar to the change trend of ETR.The content of Chlorophyll a,Chlorophyll b and Chlorophyll a + b in Ningqi No.2 were the highest.There was an extremely significant or a significant positive correlation between chlorophyll a + b and Y(Ⅱ),Fv'/Fm',qP and ETR,but a negative correlation with NPQ.So it could be concluded that Ningqi No.2 had a higher physiological activity of PS Ⅱ and physiological basis of potential biomass,the photosynthesis capability of all the four cultivars was strong.The photochemical efficiency of Ningqi No.1 was weaker,and it was easy to suffer from photo inhibition at high light intensity.%在田间试验条件下,以宁杞1号、宁杞2号、大麻叶和蒙杞l号为材料,采用叶绿素荧光技术测定了不同枸杞品种的叶绿素荧光参数,并测定供试品种的叶绿素含量.结果表明:宁杞2号的PSⅡ最大光化学效率(Fv/Fm)和PSⅡ潜在活性(Fv/Fo)值显著高于其他3个品种.在不同光照强度(PAR,0~2 847 μmol·m-2·s-1)下,实际光合量子产量[Y(Ⅱ)]、有效光合量子产量(Fv'/Fm')、光化学淬灭系数(qP)

  1. 夜间低温对不同基因型番茄叶绿素荧光参数的影响%Effect of Low Night Temperature on Chlorophyll Fluorescence Parameters in Different Genotypes Tomato Leaves

    Institute of Scientific and Technical Information of China (English)

    齐红岩; 华利静; 赵乐; 汤羽凡

    2011-01-01

    In order to reveal the effects of low night temperature on chlorophyll content and PS Ⅱ activity in different genotypes tomatoes leaves. The changes of chlorophyll content and chlorophyll fluorescence parameters in chilling-tolerant wild tomato LA 1777 and chilling-sensitive tomato Moneymaker under short-time 15℃(control) , 9℃ and 6℃ night temperature were studied. The results showed that the chlorophyll a, b content and chlorophyll a/b in two genotypes tomato leaves were significantly decreased under low night temperature stress, and the chlorophyll a and b content in Moneymaker significantly decreased than control after 1 d low night temperature treated. The Fo and NPQ increased in two tomatoes leaves under low night temperature, however, Fv/Fm,Φ>PS Ⅱ , ETR and qP were decreased significantly after low night temperature treated. Only NPQ in two tomatoes had the same trend, other fluorescence parameters in Moneymaker leaves had greater changed scale than LA 1777. The results showed that PS Ⅱ activity and electron transfer in cold-sensitive tomato leaves were influenced under low night temperature, and PS Ⅱ activity decreased significantly, but its decline scale was lower in cold-tolerant tomato.%为了明确不同基因型番茄叶片光系统Ⅱ(PSⅡ)活性对夜间低温逆境的响应.以耐低温野生番茄(Lycopersicon hirstum)LA1777和低温敏感型番茄(Lycopersicon esculentum Mill.)Moneymaker为试材,研究短期夜间15℃(对照)、9℃和6℃对不同基因型番茄叶片的叶绿素含量和叶绿素荧光参数的影响.结果表明:夜间低温下两种类型番茄幼苗叶片的叶绿素a、b含量及叶绿素a/b值均随着温度降低而呈下降趋势,夜间低温处理1d后,Moneymaker的叶绿素a和b含量均显著低于对照.夜间低温增加了番茄叶片的Fo(初始荧光)和NPQ(非光化学猝灭系数),显著降低了Fv/Fm(原初光能效率)、φPSⅡ(实际光化学量子效率)、ETR(电子传递速率)和qP(光

  2. [Flag leaf photosynthetic characteristics, change in chlorophyll fluorescence parameters, and their relationships with yield of winter wheat sowed in spring].

    Science.gov (United States)

    Xu, Lan; Gao, Zhi-qang; An, Wei; Li, Yan-liang; Jiao, Xiong-fei; Wang, Chuang-yun

    2016-01-01

    With five good winter wheat cultivars selected from the middle and lower reaches of Yangtze River and Southwest China as test materials, a field experiment in Xinding basin area of Shanxi Province was conducted to study the photosynthetic characteristics, chlorophyll content, and chlorophyll fluorescence parameters of flag leaf at different sowing dates, as well as the correlations between these indices and yield for two years (2013-2014). The results showed that the difference in most fluorescence parameters except chlorophyll content among cultivars was significant. The correlations between these fluorescence parameters and yield were significant. The variation coefficient of chlorophyll (Chl) content was low (0.12-0.17), and that of performance index based on absorption (PIabs) was high (0.32-0.39), with the partial correlation coefficients of them with grain yield from 2013 to 2014 ranged in 0.70-0.81. Under the early sowing condition, the grain yield positively correlated with PIabs at flowering and filling stages and chlorophyll content at grain filling stage, but negatively correlated with the relative variable fluorescence at I point (Vi) at grain filling stage. About 81.1%-82.8% of grain yield were determined by the variations of PIabs, Chl, and Vi. Wheat cultivars had various performances in the treatments with different sowing dates and a consistent trend was observed in the two experimental years. Among these 5 cultivars, Yangmai 13 was suitable for early sowing, with the flag leaf photosynthetic rate (Pn), Chl, most fluorescence parame-ters, and grain yield showed obviously high levels. In conclusion, under early sowing condition chlorophyll content at grain filling stages, PIabs at flowering and filling stages, and Pn were important indices for selecting wheat cultivars with high photosynthetic efficiency.

  3. 旱稻×稗草杂交后代YF2-1光合作用气体交换、叶绿素荧光和抗氧化酶系统对渗透胁迫的响应%Response of Gas Exchange, Chlorophyll a Fluorescence and Anti-oxidation Enzymes Activities to Osmotic Stress in an Upland Rice Progeny YF2-1 Derived from Oryza sativa x Echinochloa caudata

    Institute of Scientific and Technical Information of China (English)

    丁在松; 王春艳; 关东明; 赵凤悟; 赵明

    2011-01-01

    为了明确旱稻×稗草杂交后代YF2-1对渗透胁迫的耐性是否得到了改善,以YF2-1及其母本旱稻品种H65为材料,在苗期采用PEG-6000进行渗透胁迫处理,研究它们的气体交换参数、叶绿素荧光参数及抗氧化酶活性对渗透胁迫的响应.结果表明,在渗透胁迫处理下,YF2-1更能维持较高的净光合速率(Pn)和气孔导度(Gs).这可能与YF2-1具有更好的持水能力,并能有效地通过热耗散(NPQ高)消耗过剩光能,通过高活性的抗氧化酶诱导来清除活性氧,从而避免活性氧伤害相关.旱稻与稗草的远源杂交提高了旱稻对渗透胁迫的抗性.%Wild species generally have higher stress resistance than cultivated crops and are utilized as the sources of stress resistance genes in stress resistance improvement of crops.In rice, its wild relatives have been used to improve photosynthesis, yield and stress resistance.YF2-1 is obtained by distant cross between Oryza sativa and Echinochloa caudate.In order to assess its osmotic stress resistance on physiological level, gas exchange, chlorophyll a fluorescence and antioxidation enzyme activities under osmotic stress simulated by PEG-6000 were studied in seedlings of upland rice YF2-1 and H65.The results showed that YF2-1 maintained higher net photosynthetic rate and stomatal conductance under osmotic stress condition, indicating YF2-1 suffered less inhibition in photosynthesis.This may be related to its higher water retaining capacity and its effective functions for high excessive light energy dispersing (higher NPQ) and higher activities of anti-oxidation enzymes SOD, POD, and CAT, effectively clearing active oxygen species (AOS) produced by excessive light energy.Thc result shows that the distant crossing may increase the resistance to osmotic stress in rice.

  4. Integrating Biology into the General Chemistry Laboratory: Fluorometric Analysis of Chlorophyll "a"

    Science.gov (United States)

    Wesolowski, Meredith C.

    2014-01-01

    A laboratory experiment that introduces fluorometry of chlorophyll "a" at the general chemistry level is described. The use of thin-layer chromatography to isolate chlorophyll "a" from spirulina and leaf matter enables quantification of small amounts of chlorophyll "a" via fluorometry. Student results were reasonably…

  5. Research on U,Np,Pu Excitation Parameter With X-ray Fluorescence Analysis

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    <正>X-ray fluorescence analysis is a characteristic analysis technique widely applied in the geology environment and chemical industry. It is also an important quality control analytical method in nuclear

  6. Optimal parameters for near infrared fluorescence imaging of amyloid plaques in Alzheimer's disease mouse models

    Energy Technology Data Exchange (ETDEWEB)

    Raymond, S B [Harvard-MIT Division of Health Sciences and Technology, 77 Mass Ave., E25-519, Cambridge, MA 02139 (United States); Kumar, A T N; Boas, D A [Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, 149 13th St Charlestown, MA 02129 (United States); Bacskai, B J [Alzheimer' s Research Unit, Department of Neurology, Massachusetts General Hospital, 114 16th St, Charlestown, MA 02129 (United States)], E-mail: bbacskai@partners.org

    2009-10-21

    Amyloid-{beta} plaques are an Alzheimer's disease biomarker which present unique challenges for near-infrared fluorescence tomography because of size (<50 {mu}m diameter) and distribution. We used high-resolution simulations of fluorescence in a digital Alzheimer's disease mouse model to investigate the optimal fluorophore and imaging parameters for near-infrared fluorescence tomography of amyloid plaques. Fluorescence was simulated for amyloid-targeted probes with emission at 630 and 800 nm, plaque-to-background ratios from 1-1000, amyloid burden from 0-10%, and for transmission and reflection measurement geometries. Fluorophores with high plaque-to-background contrast ratios and 800 nm emission performed significantly better than current amyloid imaging probes. We tested idealized fluorophores in transmission and full-angle tomographic measurement schemes (900 source-detector pairs), with and without anatomical priors. Transmission reconstructions demonstrated strong linear correlation with increasing amyloid burden, but underestimated fluorescence yield and suffered from localization artifacts. Full-angle measurements did not improve upon the transmission reconstruction qualitatively or in semi-quantitative measures of accuracy; anatomical and initial-value priors did improve reconstruction localization and accuracy for both transmission and full-angle schemes. Region-based reconstructions, in which the unknowns were reduced to a few distinct anatomical regions, produced highly accurate yield estimates for cortex, hippocampus and brain regions, even with a reduced number of measurements (144 source-detector pairs)

  7. Electrical characteristics of chlorophyll-a polyvinyl alcohol photovoltaic cells

    Institute of Scientific and Technical Information of China (English)

    HAN, Yun-Yu(韩允雨); DIAO, Zhao-Yu*(刁兆玉); LI, Huai-Xiang(李怀祥); CHI, Yan-Hui(迟颜辉)

    2000-01-01

    A type of photovoltaic cell was made by sandwiching microcrystalline chlorophyll-a (chla) layer and polyvinyl alcohol (PVA) film between two semiconductive optical transparent SnO2 electrodes, such as SnO2/chla/PVA/SnO2. The cell showed a dark rectifying effect and presented photovaltaic properties on illumination, which was illustrated by the charge distribution in the cell. It was suggested that the SnO2/chla junction might be responsible for photovaltage and the chla/PVA for the charge separation upon irradiation of visible light. The equivalent electric circuit was discussed and its equivalent component values were calculated.

  8. Teaching laser-induced fluorescence of plant leaves

    Science.gov (United States)

    Lenk, Sándor; Gádoros, Patrik; Kocsányi, László; Barócsi, Attila

    2016-11-01

    Plants convert carbon dioxide into sugars using the energy of sunlight. Absorbed light unused for conversion is dissipated primarily as heat with a small fraction re-emitted as fluorescence at longer wavelengths. One can use the latter to estimate photosynthetic activity. The illumination of intact leaves with strong light after keeping them in dark for tens of minutes results in a rapid increase followed by a slow decay of fluorescence emission from the fluorophore chlorophyll-a, called the Kautsky effect. This paper describes a laboratory practice that introduces students of physics or engineering into this research field. It begins with the spectral measurement of the fluorescence emitted by a plant leaf upon UV excitation. Then it focuses on the red and far-red components of the fluorescence emission spectrum characteristic to the chlorophyll-a molecule and presents an inexpensive demonstration of the Kautsky effect. As researchers use more complex measurement techniques and tools, the practice ends up with the demonstration of an intelligent fluorosensor, a compact tool developed for plant physiological research and horticulture applications together with a brief interpretation of some important fluorescence parameters.

  9. Novel type of red-shifted chlorophyll a antenna complex from Chromera velia: II. Biochemistry and spectroscopy.

    Science.gov (United States)

    Bína, David; Gardian, Zdenko; Herbstová, Miroslava; Kotabová, Eva; Koník, Peter; Litvín, Radek; Prášil, Ondřej; Tichý, Josef; Vácha, František

    2014-06-01

    A novel chlorophyll a containing pigment-protein complex expressed by cells of Chromera velia adapted to growth under red/far-red illumination [1]. Purification of the complex was achieved by means of anion-exchange chromatography and gel-filtration. The antenna is shown to be an aggregate of ~20kDa proteins of the light-harvesting complex (LHC) family, unstable in the isolated form. The complex possesses an absorption maximum at 705nm at room temperature in addition to the main chlorophyll a maximum at 677nm producing the major emission band at 714nm at room temperature. The far-red absorption is shown to be the property of the isolated aggregate in the intact form and lost upon dissociation. The purified complex was further characterized by circular dichroism spectroscopy and fluorescence spectroscopy. This work thus identified the third different class of antenna complex in C. velia after the recently described FCP-like and LHCr-like antennas. Possible candidates for red antennas are identified in other taxonomic groups, such as eustigmatophytes and the relevance of the present results to other known examples of red-shifted antenna from other organisms is discussed. This work appears to be the first successful isolation of a chlorophyll a-based far-red antenna complex absorbing above 700nm unrelated to LHCI.

  10. The effect of various sapropel concentrations on content and fluorescence of photosynthetic pigments of bean

    Directory of Open Access Journals (Sweden)

    Irena Januškaitienė

    2017-03-01

    Full Text Available Tarosiškio lake sapropel impact on beans (Vicia faba L. photosynthesis parameters (content of chlorophylls and chlorophyll a fluorescence was investigated in this study. Plants were sown in 1 L volume pots by 5 seeds with light loamy soil and grown in growth chambers. Considering sapropel composition, 2.2; 3.1 and 4 t/ha dry sapropel concentrations were chosen for investigation. Sapropel affected plants were compared with plants grown in unfertilised and with synthetic fertiliser fertilised soils. On 14th day of experiment, when the plants reached two leaves growths stage (BBCH 12, chlorophyll a fluorescence parameters of investigated plants were measured. Then plants were grown for 4 weeks more and at stem elongation stage (BBCH 31 chlorophyll a fluorescence parameters were measured repeatedly and also the content of chlorophylls and carotenoids were investigated. The efficiency II photosystem of bean increased by increasing sapropel concentration in soil, but insignificantly (p>0.05. Photosynthesis performance index was increasing (r=0.91; p<0.05 up to 3.1 t/ha sapropel concentration increase at BBCH 12 growth stage. The same tendency was detected for electron transfer rate of bean (r=0.9; p<0.05 at this growth stage, but at later stage (BBCH 31 it slightly lowered (r=-0.02; p>0.05. At BBCH 12 stage the highest non photochemical quenching (NPQ value was measured in control beans, while at BBCH 31 stage, opposite trend was noticed (r=0.86; p <0.05. At BBCH 31 growth stage sapropel concentration increase made bean chlorophyll content to decrease, but insignificantly (r=-0.18, p>0.05, and the changes in carotenoid contents were similar to chlorophyll a+b.DOI: http://dx.doi.org/10.5755/j01.erem.72.4.16585

  11. Interaction of fisetin with human serum albumin by fluorescence, circular dichroism spectroscopy and DFT calculations: binding parameters and conformational changes

    Energy Technology Data Exchange (ETDEWEB)

    Matei, Iulia; Ionescu, Sorana [Department of Physical Chemistry, Faculty of Chemistry, University of Bucharest, Bd. Regina Elisabeta 4-12, 030018 Bucharest (Romania); Hillebrand, Mihaela, E-mail: mihh@gw-chimie.math.unibuc.ro [Department of Physical Chemistry, Faculty of Chemistry, University of Bucharest, Bd. Regina Elisabeta 4-12, 030018 Bucharest (Romania)

    2011-08-15

    The interaction between fisetin, an antioxidant and neuroprotective flavonoid, and human serum albumin (HSA) is investigated by means of fluorescence (steady-state, synchronous, time-resolved) and circular dichroism (CD) spectroscopy. The formation of a 1:1 complex with a constant of about 10{sup 5} M{sup -1} was evidenced. Foerster's resonance energy transfer and competitive binding with site markers warfarin and ibuprofen were considered and discussed. Changes in the CD band of HSA indicate a decrease in the {alpha}-helix content upon binding. An induced CD signal for bound fisetin was observed and rationalized in terms of density functional theory calculations. - Highlights: > Fisetin-BSA system was studied by fluorescence spectroscopy. > Binding parameters, association constant and number of sites were estimated. > Binding site of fisetin was identified by competitive experiments. > Conformational changes in HSA and fisetin were evidenced by circular dichroism. > TDDFT calculated CD spectra supported the experimental data.

  12. Reconstitution of Photosystem Ⅱ Reaction Center with Cu-Chlorophyll a

    Institute of Scientific and Technical Information of China (English)

    Shuang Liu; Feng-Qin Dong; Chun-Hong Yang; Chong-Qin Tang; Ting-Yun Kuang

    2006-01-01

    An isolated photosystem (PS) Ⅱ reaction center (RC) with altered pigment content was obtained by chemical exchange of native chlorophyll a (Chl) with externally added Cu-Chl a (Cu-Chl). Pigment composition and spectroscopic properties of the RC exchanged with Cu-Chl were compared with native RC and RC treated with Chl in the same way. High-performance liquid chromatography analysis showed approximately 0.5 Cu-Chl per two pheophytin in the Cu-Chl-reconstituted RC preparation. Insertion of Cu-Chl resulted in a decrease in absorption at 670 nm and an increase at 660 nm, suggesting that the peripheral Chl may have been displaced. Fluorescence emission spectra of the Cu-Chl-reconstituted RC displayed a marked decrease in fluorescence yield and a blue shift of the band maximum, accompanied by the appearance of a broad peak at a shorter wavelength, indicating that energy transfer in the modified RC was disturbed by Cu-Chl, a quencher of the excited state. However, there were few differences in the circular dichroism (CD) spectra,suggesting that the arrangement of pigments and proteins responsible for the CD signal was not significantly affected. In addition, no obvious change in peptide components was found after the exchange procedure.

  13. Strong enhancement of chlorophyll a concentration by a weak typhoon

    CERN Document Server

    SUN, Liang; Xian, Tao; Lu, Zhu-min; Fu, Yun-Fei; 10.3354/meps08477

    2010-01-01

    Recent studies demonstrate that chlorophyll a (chl a) concentrations in the surface ocean can be significantly enhanced due to typhoons. The present study investigated chl a concentrations in the middle of the South China Sea (SCS) from 1997-2007. Only the Category1 (minimal) Typhoon Hagibis (2007) had a notable effect on the chl a concentrations. Typhoon Hagibis had a strong upwelling potential due to its location near the equator, and the forcing time of the typhoon (>82 h) was much longer than the geostrophic adjustment time (~63 h). The higher upwelling velocity and the longer forcing time increased the depth of the mixed-layer, which consequently induced a strong phytoplankton bloom that accounted for about 30% of the total annual chl a concentration in the middle of the SCS. The implication is that the forcing time of a typhoon should be long enough to establish a strong upwelling and consequently for the induction of significant upper ocean responses.

  14. Distribution characteristics of size-fractionated chlorophyll a,primary production and new production in the Laizhou Bay,July 1997

    Institute of Scientific and Technical Information of China (English)

    蔡煜明; 宁修仁; 刘子琳; 刘诚刚

    2002-01-01

    The distributions of chlorophyll a concentration, primary production and new production were observed in the Laizhou Bay of the Bohai Sea in both spring and neap tides during July 1997. The results showed that there were marked features of spatial zonation in the surveyed area, due to the differences between the geographic environment and the hydrological conditions. Chlorophyll a, primary production and new production were all higher in spring tides than that in neap tides in the Laizhou Bay.The highest values of these parameters were encountered in the central regions of the bay. At most stations, chlorophyll a concentrations at the bottom were higher than that at the surface. The results of size-fractionated chlorophyll a and primary production showed that contributions of nano-combining picoplankton (< 20 μm) to total chlorophyll a and primary production were dominant in phytoplankton community biomass and production of the Laizhou Bay. The environmental factors, primary production and new production in the Laizhou Bay are compared with other sea areas.

  15. Decadal variability of chlorophyll a in the South China Sea:a possible mechanism

    Institute of Scientific and Technical Information of China (English)

    LIU Fenfen; CHEN Chuqun; ZHAN Haigang

    2012-01-01

    Four climatologies on a monthly scale (January,April,May and November) of chlorophyll a within the South China Sea (SCS) were calculated using a Coastal Zone Color Scanner (CZCS) (1979-1983) and the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) (1998-2002).We analyzed decadal variability of chlorophyll a by comparing the products of the two observation periods.The relationships of variability in chlorophyll a with sea surface wind speed (SSW),sea surface temperature (SST),wind stress (WS),and mixed layer depth (MLD) were determined.The results indicate that there is obvious chlorophyll a decadal variability in the SCS.The decadal chlorophyll a presents distinct seasonal variability in characteristics,which may be as a result of various different dynamic processes.The negative chlorophyll a concentration anomaly in January was associated with the warming of SST and a shallower MLD.Generally,there were higher chlorophyll a concentrations in spring during the SeaWiFS period compared with the CZCS period.However,the chlorophyll a concentration exhibits some regional differences during this season,leading to an explanation being difficult.The deepened MLD may have contributed to the positive chlorophyll a concentration anomalies from the northwestern Luzon Island to the northeastern region of Vietnam during April and May.The increases of chlorophyll a concentration in northwestem Borneo during May may be because the stronger SSW and higher WS produce a deeper mixed layer and convective mixing,leading to high levels of nutrient concentrations.The higher chlorophyll a off southeastem Vietnam may be associated with the advective transport of the colder water extending from the Karimata Strait to southeastem Vietnam.

  16. Evaluation of Chlorophyll Content and Fluorescence Parameters as Indicators of Drought Tolerance in Barley

    Institute of Scientific and Technical Information of China (English)

    LI Rong-hua; GUO Pei-guo; Michael Baum; Stefania Grando; Salvatore Ceccarelli

    2006-01-01

    Drought is a major abiotic stress that severely affects food production worldwide. Agronomic and physiological traits associated with drought tolerance are suitable indicators for selection of drought tolerance genotypes to reduce the impact of water deficit on crop yield in breeding program. The objective of this study was to identify indicators related to drought tolerance through analysis of photosynthetic traits in barley (Hordeum vulgare L.). These traits included chlorophyll content, initial fluorescence (Fo), maximum primary yield of photochemistry of pho tosystem Ⅱ (Fv / Fo) and maximum quantum yield of photosystem Ⅱ (Fv/Fm). Four genotypes (Tadmor, Arta, Morocco9-75 and WI2291) variable in drought tolerance were used to investigate the correlation between these traits and drought tolerance. The results reflected that all of these traits were affected negatively in the four genotypes at different levels of post-anthesis drought stress, but the decrease in drought tolerant genotypes was much less than that of drought sensitive genotypes. The results further revealed that the components of the photosynthetic apparatus could be damaged significantly in drought sensitive genotypes, while drought tolerant genotypes were relatively less affected. On the other hand, the values of chlorophyll content, Fo, Fv/Fo and Fv/Fm in drought tolerance genotypes were significantly higher than those in drought sensitive genotypes under drought stress. It was concluded that chlorophyll content, Fo, Fv / Fo and Fv / Fm could be considered as reliable indicators in screening barley germplasm for drought tolerance.

  17. Preparation of layered double hydroxide/chlorophyll a hybrid nano-antennae: a key step.

    Science.gov (United States)

    Sommer Márquez, Alicia E; Lerner, Dan A; Fetter, Geolar; Bosch, Pedro; Tichit, Didier; Palomares, Eduardo

    2014-07-21

    In the first step to obtain an efficient nano-antenna in a bottom-up approach, new hybrid materials were synthesized using a set of layered double hydroxides (LDHs) with basic properties and pure chlorophyll a (Chl a). The stability of the adsorbed monolayer of Chl a was shown to be dependent on the nature and the ratio of the different metal ions present in the LDHs tested. The hybrid materials turned out to be adequate for stabilizing Chl a on Mg/Al LDHs for more than a month under ambient conditions while a limited catalytic decomposition was observed for the Ni/Al LDHs leading to the formation of pheophytin. These changes were followed by namely XRD, DR-UV-vis and fluorescence spectroscopies of the hybrid antennae and of the solutions obtained from their lixiviation with acetone or diethylether. On Mg/Al hydrotalcites the stability of the adsorbed Chl a was equivalent for values of the metal atom ratio ranging from 2 to 4. The latter hybrids should constitute a good basis to form efficient nanoscale light harvesting units following intercalation of selected dyes. This work describes an efficient preparation of Chl a that allows scale-up as well as the obtention of a stable Chl a monolayer on the surface of various LDHs.

  18. The algorithms of chlorophyll-a concentration for CMODIS

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The algorithms of extracting chlorophyll-a (Chl-a) concentration have been established for Chinese moderate resolution imaging spectrometer (CMODIS) mounted on Shenzhou-3 spaceship launched on 25 March 2002. The CMODIS is an ocean color sensor with 30 visible channels and 4 infrared channels, much different from other ocean color satellites and needs new algorithms to process data. Three models of Chl-a concentration were established based on Chl-a data retrieved from sea-viewing wide field-of-view sensor (SeaWiFS), with the average relative errors of 26.6%, 24%.0% and 33.5%, respectively. This practical and economic approach can be used for developing the algorithms of Chinese ocean color and temperature sensor (COCTS) on the satellite Haiyang-1 to derive the Chl-a concentration concentration distribution.The applicability of the algorithms was analyzed using some in situ measurements. Suspended sediment is the main factor influencing the accuracy of the spectral ratio algorithms of Chl-a concentration. The algorithms are suitable to using in the regions where suspended sediment concentrations (SSC) are less than 5 g/m3 under the condition of relative error of Chl-a concentration retrieval within 35%. High concentration of suspended sediment leads to the overestimate remote sensing retrieval of concentration of Chl-a, while low-middle SSCs lead to the low Chl-a concentration values using the spectral ratio algorithms. Since the accuracy of Chl-a concentration by the spectral ratio algorithms is limited to waters of Case 2, it is necessary to develop semi-analytical models to improve the performance of satellite ocean color remote sensing in turbid coastal waters.

  19. Genotypic response of detached leaves versus intact plants for chlorophyll fluorescence parameters under high temperature stress in wheat

    DEFF Research Database (Denmark)

    Sharma, Dew Kumari; Fernández, Juan Olivares; Rosenqvist, Eva;

    2014-01-01

    The genotypic response of wheat cultivars as affected by two methods of heat stress treatment (treatment of intact plants in growth chambers versus treatment of detached leaves in test tubes) in a temperature controlled water bath were compared to investigate how such different methods of heat...... of the cultivar response in intact plants versus detached leaves was low (r=0.13 (with expt.1) and 0.02 with expt.2). The most important difference between the two methods was the pronounced difference in time scale of reaction, which may indicate the involvement of different physiological mechanisms in response...... treatment affect chlorophyll fluorescence parameters. A set of 41 spring wheat cultivars differing in their maximum photochemical efficiency of photosystem (PS) II (Fv/Fm) under heat stress conditions was used. These cultivars were previously evaluated based on the heat treatment of intact plants...

  20. Non-photochemical quenching in cryptophyte alga Rhodomonas salina is located in chlorophyll a/c antennae.

    Science.gov (United States)

    Kaňa, Radek; Kotabová, Eva; Sobotka, Roman; Prášil, Ondřej

    2012-01-01

    Photosynthesis uses light as a source of energy but its excess can result in production of harmful oxygen radicals. To avoid any resulting damage, phototrophic organisms can employ a process known as non-photochemical quenching (NPQ), where excess light energy is safely dissipated as heat. The mechanism(s) of NPQ vary among different phototrophs. Here, we describe a new type of NPQ in the organism Rhodomonas salina, an alga belonging to the cryptophytes, part of the chromalveolate supergroup. Cryptophytes are exceptional among photosynthetic chromalveolates as they use both chlorophyll a/c proteins and phycobiliproteins for light harvesting. All our data demonstrates that NPQ in cryptophytes differs significantly from other chromalveolates - e.g. diatoms and it is also unique in comparison to NPQ in green algae and in higher plants: (1) there is no light induced xanthophyll cycle; (2) NPQ resembles the fast and flexible energetic quenching (qE) of higher plants, including its fast recovery; (3) a direct antennae protonation is involved in NPQ, similar to that found in higher plants. Further, fluorescence spectroscopy and biochemical characterization of isolated photosynthetic complexes suggest that NPQ in R. salina occurs in the chlorophyll a/c antennae but not in phycobiliproteins. All these results demonstrate that NPQ in cryptophytes represents a novel class of effective and flexible non-photochemical quenching.

  1. Non-photochemical quenching in cryptophyte alga Rhodomonas salina is located in chlorophyll a/c antennae.

    Directory of Open Access Journals (Sweden)

    Radek Kaňa

    Full Text Available Photosynthesis uses light as a source of energy but its excess can result in production of harmful oxygen radicals. To avoid any resulting damage, phototrophic organisms can employ a process known as non-photochemical quenching (NPQ, where excess light energy is safely dissipated as heat. The mechanism(s of NPQ vary among different phototrophs. Here, we describe a new type of NPQ in the organism Rhodomonas salina, an alga belonging to the cryptophytes, part of the chromalveolate supergroup. Cryptophytes are exceptional among photosynthetic chromalveolates as they use both chlorophyll a/c proteins and phycobiliproteins for light harvesting. All our data demonstrates that NPQ in cryptophytes differs significantly from other chromalveolates - e.g. diatoms and it is also unique in comparison to NPQ in green algae and in higher plants: (1 there is no light induced xanthophyll cycle; (2 NPQ resembles the fast and flexible energetic quenching (qE of higher plants, including its fast recovery; (3 a direct antennae protonation is involved in NPQ, similar to that found in higher plants. Further, fluorescence spectroscopy and biochemical characterization of isolated photosynthetic complexes suggest that NPQ in R. salina occurs in the chlorophyll a/c antennae but not in phycobiliproteins. All these results demonstrate that NPQ in cryptophytes represents a novel class of effective and flexible non-photochemical quenching.

  2. Wavelength dispersive X-ray fluorescence analysis using fundamental parameter approach of Catha edulis and other related plant samples

    Science.gov (United States)

    Shaltout, Abdallah A.; Moharram, Mohammed A.; Mostafa, Nasser Y.

    2012-01-01

    This work is the first attempt to quantify trace elements in the Catha edulis plant (Khat) with a fundamental parameter approach. C. edulis is a famous drug plant in east Africa and Arabian Peninsula. We have previously confirmed that hydroxyapatite represents one of the main inorganic compounds in the leaves and stalks of C. edulis. Comparable plant leaves from basil, mint and green tea were included in the present investigation as well as trifolium leaves were included as a non-related plant. The elemental analyses of the plants were done by Wavelength Dispersive X-Ray Fluorescence (WDXRF) spectroscopy. Standard-less quantitative WDXRF analysis was carried out based on the fundamental parameter approaches. According to the standard-less analysis algorithms, there is an essential need for an accurate determination of the amount of organic material in the sample. A new approach, based on the differential thermal analysis, was successfully used for the organic material determination. The obtained results based on this approach were in a good agreement with the commonly used methods. Depending on the developed method, quantitative analysis results of eighteen elements including; Al, Br, Ca, Cl, Cu, Fe, K, Na, Ni, Mg, Mn, P, Rb, S, Si, Sr, Ti and Zn were obtained for each plant. The results of the certified reference materials of green tea (NCSZC73014, China National Analysis Center for Iron and Steel, Beijing, China) confirmed the validity of the proposed method.

  3. Relationship between the Water Body Chlorophyll-a and Water Quality Factors of Wetlands Baiguishan Reservoir

    Institute of Scientific and Technical Information of China (English)

    SHE Oiu-sheng; TIAN Xun; WANG Guo-zhen; JI Xiao-cun; LI Jiu-xuan; ZHAO Zhen

    2011-01-01

    [ Objective] The aim was to explore the relationship between water body Chlorophyll-a and water quality factors of wetlands Baiguishan reservoir. [ Method] Chlorophyll-a and water quality factors of water quality of Wetlands BaiGuishan Reservoir was studied, the analysis of the relationship on water quality of Wetlands Baiguishan Reservoir was made by use of trophic status indices and SPSS17.0 statistical analysis.[ Result] Total phosphorus was an irnportant factor of influence Chlorophyll-a in reservoir, water body had slight eutrophication phenomenon in reservoir of July to October in 2010. [ Conclusion] Comprehensive management should be strengthened so as to improve the water quality of Baiguishan wetland.

  4. Field Detection of Chlorophyll-a Concentration in the Sea Surface Layer by an Airborne Oceanographic Lidar

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    An airborne oceanographic lidar, with a frequency-tripled Q-switched Nd: YAG laser of 355 nm, has been designed to measure chlorophyll-a (Chl-a) concentration in the sea surface layer by the Ocean Remote Sensing Institute, OUC. The field experiment was carried out in the bay which is located south of the Liaodong Peninsula on the 10th of September 2005. After the flight, the raw data were processed and analyzed by the fluorescence-to-Raman ratio method with seawater attenuation coefficients calculated from signal profiles. The results of Chl-a concentration measurements by lidar are shown. The measurements in clear sea water were also compared with those of Chl-a concentration by a Moderate Resolution Imaging Spectroradiometer (MODIS).

  5. Two-color two-photon excited fluorescence of indole: Determination of wavelength-dependent molecular parameters

    Energy Technology Data Exchange (ETDEWEB)

    Herbrich, Sebastian; Al-Hadhuri, Tawfik; Gericke, Karl-Heinz, E-mail: k.Gericke@tu-bs.de [Institut für Physikalische und Theoretische Chemie, TU Braunschweig, Hans-Sommer-Straße 10, 38106 Braunschweig (Germany); Shternin, Peter S., E-mail: pshternin@gmail.com; Vasyutinskii, Oleg S., E-mail: osv@pms.ioffe.ru [Ioffe Institute, Politekhnicheskaya 26, 194021 St. Petersburg (Russian Federation); St. Petersburg Polytechnic University, Politekhnicheskaya 29, St. Petersburg 195251 (Russian Federation); Smolin, Andrey G. [Ioffe Institute, Politekhnicheskaya 26, 194021 St. Petersburg (Russian Federation)

    2015-01-14

    We present a detailed study of two-color two-photon excited fluorescence in indole dissolved in propylene glycol. Femtosecond excitation pulses at effective wavelengths from 268 to 293.33 nm were used to populate the two lowest indole excited states {sup 1}L{sub a} and {sup 1}L{sub b} and polarized fluorescence was then detected. All seven molecular parameters and the two-photon polarization ratio Ω containing information on two-photon absorption dynamics, molecular lifetime τ{sub f}, and rotation correlation time τ{sub rot} have been determined from experiment and analyzed as a function of the excitation wavelength. The analysis of the experimental data has shown that {sup 1}L{sub b}–{sup 1}L{sub a} inversion occurred under the conditions of our experiment. The two-photon absorption predominantly populated the {sup 1}L{sub a} state at all excitation wavelengths but in the 287–289 nm area which contained an absorption hump of the {sup 1}L{sub b} state 0-0 origin. The components of the two-photon excitation tensor S were analyzed giving important information on the principal tensor axes and absorption symmetry. The results obtained are in a good agreement with the results reported by other groups. The lifetime τ{sub f} and the rotation correlation time τ{sub rot} showed no explicit dependence on the effective excitation wavelength. Their calculated weighted average values were found to be τ{sub f} = 3.83 ± 0.14 ns and τ{sub rot} = 0.74 ± 0.06 ns.

  6. VIIRSN Level-3 Standard Mapped Image, Chlorophyll a, 8-Day, 4km

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from the NPP-Suomi Spacecraft Measurements are gathered by the VIIRS instrument carried aboard the...

  7. Chlorophyll-a, Aqua MODIS, NPP, 0.0125 degrees, Gulf of Mexico, EXPERIMENTAL

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from NASA's Aqua Spacecraft. Measurements are gathered by the Moderate Resolution Imaging...

  8. VIIRSN Level-3 Standard Mapped Image, Chlorophyll a, Monthly, 4km

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from ther NPP-Suomi spacecraft. Measurements are gathered by VIIRS instrument carried aboard the...

  9. VIIRSN Level-3 Standard Mapped Image, Chlorophyll a, Daily, 4km

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from the NPP -Suonomi Spacecraft. Measurements are gathered by the VIIRS instrument carried aboard the...

  10. Chlorophyll-a, Aqua MODIS, NPP, 0.025 degrees, Pacific Ocean, EXPERIMENTAL

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from NASA's Aqua Spacecraft. Measurements are gathered by the Moderate Resolution Imaging...

  11. Chlorophyll-a, Aqua MODIS, NPP, 0.05 degrees, Global, Science Quality

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from NASA's Aqua Spacecraft. Measurements are gathered by the Moderate Resolution Imaging...

  12. Transport of dissolved nutrients and chlorophyll a in a tropical estuary, southwest coast of India.

    Digital Repository Service at National Institute of Oceanography (India)

    Lallu, K.R.; Fausia, K.H.; Vinita, J.; Balachandran, K.K.; NaveenKumar, K.R.; Rehitha, T.V.

    Intra-tidal variability in the transport of materials through the Cochin estuary was studied over successive spring and neap tides to estimate the export fluxes of nutrients and chlorophyll a into the adjoining coastal zone. The results showed...

  13. Chlorophyll-a, Aqua MODIS, NPP, 0.0125 degrees, East US, EXPERIMENTAL

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from NASA's Aqua Spacecraft. Measurements are gathered by the Moderate Resolution Imaging...

  14. Chlorophyll-a, Aqua MODIS, NPP, 0.0125 degrees, West US, EXPERIMENTAL

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from NASA's Aqua Spacecraft. Measurements are gathered by the Moderate Resolution Imaging...

  15. Chlorophyll-a, Aqua MODIS, NPP, 0.0125 degrees, Indonesia

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from NASA's Aqua Spacecraft. Measurements are gathered by the Moderate Resolution Imaging...

  16. Chlorophyll-a, Terra MODIS, OSU DB, 0.0125 degrees, West US, EXPERIMENTAL

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from NASA's Terra satellite. Measurements are gathered by the Moderate Resolution Imaging...

  17. Chlorophyll-a, Aqua MODIS, OSU DB, 0.0125 degrees, West US

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration data from NASA's Aqua satellite. Measurements are gathered by the Moderate Resolution Imaging...

  18. Estimation of chlorophyll-a concentration in the Zhujiang Estuary from SeaWiFS data

    Institute of Scientific and Technical Information of China (English)

    Chen Chuqun(陈楚群); Shi Ping(施平); Magnus Larson; Lennart Jonsson

    2002-01-01

    The chlorophyll-a concentration is generally overestimated for the southem China coastal waters if the default algorithm of the SeaDAS is employed. An algorithm is developed for retrieval of chlorophyll-a concentration in the Zhujiang Estuary, Guangdong Province, China, by using simulated reflectance data. The simulated reflectance is calculated corresponding to the SeaWiFS wavelength bands, via a general model by inputting measured water components, I.e., the suspended sediment,chlorophyll-a, and yellow substance (DOC) concentration data of 130 samples. Empirical relationships of the chlorophyll-a concentration to 240 different band combinations are investigated based on the simulated reflectance data, and the band combination, R5R6/R3R4, is found to be the optimum one for the development of an algorithm valid for the Zhujiang Estuary. This algorithm is then employed to determine the chlorophyll-a concentration from SeaWiFS data. The estimated concentrations have a better accuracy than those obtained from the SeaDAS default algorithm when comnpared with sea truth data. The new algorithm is demonstrated to work well and is used to derive a series of image maps of the chlorophyll-a concentration distribution for the Zhujiang Estuary and adjacent coastal areas.

  19. Comparison of Chlorophyll-a Measurement Using Multi Spatial Imagery and Numerical Model in Bali Strait

    Science.gov (United States)

    Hanintyo, Rizki; susilo, Eko

    2016-11-01

    One of abundance of nutrient in coastal area is chlorophyll-a, where chlorophyll-a is a driving factor to derive fishing ground location. There's several method has been used to derive chlorophyll-a concentration from insitu data, remote sensing satellite data, and ocean dynamics models, but we are not decide those data for certain area in coastal area and open ocean. In this paper, we will use Aqua-Terra MODIS, Landsat -8 and INDESO Satellite observation dataset to detect chlorophyll-a and also using dynamic modelling produced by INDESO and MyOcean/Marine Copernicus. Using a lot variation of data to understand the differences of spatial resolution and accuracy with observed insitu data. After calculating data comparison with insitu data in bali strait on 2014, we can conclude that Landsat-8 data has the highest r value r=0.41. For model data, comparison between insitu data and MyOcean data has r=0.3. in the other hand, insitu data and INDESO data model has r=0.26. In coastal areas (case 2 water), Landsat-8 data performed to give detail information of chlorophyll-a. Furthermore for open ocean areas (case 1 water), we can use numerical model from MyOcean/Marine Copernicus because it has lower resolution and able to forecast. For those data, it can help non artisanal fisheries to predict chlorophyll-a area in their fishing ground areas

  20. Wavelength dispersive X-ray fluorescence analysis using fundamental parameter approach of Catha edulis and other related plant samples

    Energy Technology Data Exchange (ETDEWEB)

    Shaltout, Abdallah A., E-mail: shaltout_a@hotmail.com [Spectroscopy Department, Physics Division, National Research Center, El Behooth Str., 12622 Dokki, Cairo (Egypt); Faculty of science, Taif University, 21974 Taif, P.O. Box 888 (Saudi Arabia); Moharram, Mohammed A. [Spectroscopy Department, Physics Division, National Research Center, El Behooth Str., 12622 Dokki, Cairo (Egypt); Mostafa, Nasser Y. [Faculty of science, Taif University, 21974 Taif, P.O. Box 888 (Saudi Arabia); Chemistry Department, Faculty of Science, Suez Canal University, Ismailia (Egypt)

    2012-01-15

    This work is the first attempt to quantify trace elements in the Catha edulis plant (Khat) with a fundamental parameter approach. C. edulis is a famous drug plant in east Africa and Arabian Peninsula. We have previously confirmed that hydroxyapatite represents one of the main inorganic compounds in the leaves and stalks of C. edulis. Comparable plant leaves from basil, mint and green tea were included in the present investigation as well as trifolium leaves were included as a non-related plant. The elemental analyses of the plants were done by Wavelength Dispersive X-Ray Fluorescence (WDXRF) spectroscopy. Standard-less quantitative WDXRF analysis was carried out based on the fundamental parameter approaches. According to the standard-less analysis algorithms, there is an essential need for an accurate determination of the amount of organic material in the sample. A new approach, based on the differential thermal analysis, was successfully used for the organic material determination. The obtained results based on this approach were in a good agreement with the commonly used methods. Depending on the developed method, quantitative analysis results of eighteen elements including; Al, Br, Ca, Cl, Cu, Fe, K, Na, Ni, Mg, Mn, P, Rb, S, Si, Sr, Ti and Zn were obtained for each plant. The results of the certified reference materials of green tea (NCSZC73014, China National Analysis Center for Iron and Steel, Beijing, China) confirmed the validity of the proposed method. - Highlights: Black-Right-Pointing-Pointer Quantitative analysis of Catha edulis was carried out using standardless WDXRF. Black-Right-Pointing-Pointer Differential thermal analysis was used for determination of the loss of ignition. Black-Right-Pointing-Pointer The existence of hydroxyapatite in Catha edulis plant has been confirmed. Black-Right-Pointing-Pointer The CRM results confirmed the validity of the developed method.

  1. An Excel tool for deriving key photosynthetic parameters from combined gas exchange and chlorophyll fluorescence: theory and practice.

    Science.gov (United States)

    Bellasio, Chandra; Beerling, David J; Griffiths, Howard

    2016-06-01

    Combined photosynthetic gas exchange and modulated fluorometres are widely used to evaluate physiological characteristics associated with phenotypic and genotypic variation, whether in response to genetic manipulation or resource limitation in natural vegetation or crops. After describing relatively simple experimental procedures, we present the theoretical background to the derivation of photosynthetic parameters, and provide a freely available Excel-based fitting tool (EFT) that will be of use to specialists and non-specialists alike. We use data acquired in concurrent variable fluorescence-gas exchange experiments, where A/Ci and light-response curves have been measured under ambient and low oxygen. From these data, the EFT derives light respiration, initial PSII (photosystem II) photochemical yield, initial quantum yield for CO2 fixation, fraction of incident light harvested by PSII, initial quantum yield for electron transport, electron transport rate, rate of photorespiration, stomatal limitation, Rubisco (ribulose 1·5-bisphosphate carboxylase/oxygenase) rate of carboxylation and oxygenation, Rubisco specificity factor, mesophyll conductance to CO2 diffusion, light and CO2 compensation point, Rubisco apparent Michaelis-Menten constant, and Rubisco CO2 -saturated carboxylation rate. As an example, a complete analysis of gas exchange data on tobacco plants is provided. We also discuss potential measurement problems and pitfalls, and suggest how such empirical data could subsequently be used to parameterize predictive photosynthetic models.

  2. Deriving C4 photosynthetic parameters from combined gas exchange and chlorophyll fluorescence using an Excel tool: theory and practice.

    Science.gov (United States)

    Bellasio, Chandra; Beerling, David J; Griffiths, Howard

    2016-06-01

    The higher photosynthetic potential of C4 plants has led to extensive research over the past 50 years, including C4 -dominated natural biomes, crops such as maize, or for evaluating the transfer of C4 traits into C3 lineages. Photosynthetic gas exchange can be measured in air or in a 2% Oxygen mixture using readily available commercial gas exchange and modulated PSII fluorescence systems. Interpretation of these data, however, requires an understanding (or the development) of various modelling approaches, which limit the use by non-specialists. In this paper we present an accessible summary of the theory behind the analysis and derivation of C4 photosynthetic parameters, and provide a freely available Excel Fitting Tool (EFT), making rigorous C4 data analysis accessible to a broader audience. Outputs include those defining C4 photochemical and biochemical efficiency, the rate of photorespiration, bundle sheath conductance to CO2 diffusion and the in vivo biochemical constants for PEP carboxylase. The EFT compares several methodological variants proposed by different investigators, allowing users to choose the level of complexity required to interpret data. We provide a complete analysis of gas exchange data on maize (as a model C4 organism and key global crop) to illustrate the approaches, their analysis and interpretation. © 2015 John Wiley & Sons Ltd.

  3. Relationships between the photochemical reflectance index (PRI) and chlorophyll fluorescence parameters and plant pigment indices at different leaf growth stages.

    Science.gov (United States)

    Rahimzadeh-Bajgiran, Parinaz; Munehiro, Masashi; Omasa, Kenji

    2012-09-01

    This study aimed to evaluate the photochemical reflectance index (PRI) for assessing plant photosynthetic performance throughout the plant life cycle. The relationships between PRI, chlorophyll fluorescence parameters, and leaf pigment indices in Solanum melongena L. (aubergine; eggplant) were studied using photosynthetic induction curves both in short-term (diurnal) and long-term (seasonal) periods under different light intensities. We found good correlations between PRI/non-photochemical quenching (NPQ) and PRI/electron transport rate (ETR) in the short term at the same site of a single leaf but these relationships did not hold throughout the life of the plant. In general, changes in PRI owing to NPQ or ETR variations in the short term were PRI was highly correlated to plant pigments, especially chlorophyll indices measured by spectral reflectance. Moreover, relationships of steady-state PRI/ETR and steady-state PRI/photochemical yield of photosystem II (Φ(PSII)) measured at uniform light intensity at different life stages proved that overall photosynthesis capacity and steady-state PRI were better correlated through chlorophyll content than NPQ and xanthophylls. The calibrated PRI index accommodated these pigments effects and gave better correlation with NPQ and ETR than PRI. Further studies of PRI indices based on pigments other than xanthophylls, and studies on PRI mechanisms in different species are recommended.

  4. Analysis of MERIS Reflectance Algorithms for Estimating Chlorophyll-a Concentration in a Brazilian Reservoir

    Directory of Open Access Journals (Sweden)

    Pétala B. Augusto-Silva

    2014-11-01

    Full Text Available Chlorophyll-a (chl-a is a central water quality parameter that has been estimated through remote sensing bio-optical models. This work evaluated the performance of three well established reflectance based bio-optical algorithms to retrieve chl-a from in situ hyperspectral remote sensing reflectance datasets collected during three field campaigns in the Funil reservoir (Rio de Janeiro, Brazil. A Monte Carlo simulation was applied for all the algorithms to achieve the best calibration. The Normalized Difference Chlorophyll Index (NDCI got the lowest error (17.85%. The in situ hyperspectral dataset was used to simulate the Ocean Land Color Instrument (OLCI spectral bands by applying its spectral response function. Therefore, we evaluated its applicability to monitor water quality in tropical turbid inland waters using algorithms developed for MEdium Resolution Imaging Spectrometer (MERIS data. The application of OLCI simulated spectral bands to the algorithms generated results similar to the in situ hyperspectral: an error of 17.64% was found for NDCI. Thus, OLCI data will be suitable for inland water quality monitoring using MERIS reflectance based bio-optical algorithms.

  5. Fo-spectra of chlorophyll fluorescence for the determination of zooplankton grazing

    NARCIS (Netherlands)

    Lürling, M.F.L.L.W.; Verschoor, A.M.

    2003-01-01

    In the PHYTO-PAM phytoplankton analyzer the minimal fluorescence of dark-adapted samples (F-0) was assessed, which gives direct information on the chlorophyll-a content. Clearance rates (CR) of Daphnia and Brachionus were calculated from a decrease in chlorophyll-a concentration using the PHYTO-PAM

  6. FO-spectra of chlorophyll fluorescence for the determination of zooplankton grazing

    NARCIS (Netherlands)

    Lürling, M.; Verschoor, A.M.

    2003-01-01

    In the PHYTO-PAM phytoplankton analyzer the minimal fluorescence of dark-adapted samples (F0) was assessed, which gives direct information on the chlorophyll- a content. Clearance rates (CR) of Daphnia and Brachionus were calculated from a decrease in chlorophyll-a concentration using the PHYTO-PAM

  7. Effect of micellar species on photoinduced hydrogen production with Mg chlorophyll-a from spirulina and colloidal platinum

    Energy Technology Data Exchange (ETDEWEB)

    Tomonou, Yumiko; Amao, Yutaka [Oita Univ., Dept. of Applied Chemistry, Oita (Japan)

    2004-02-01

    Effect of micellar species on the photostability of Mg chlorophyll-a and the photoinduced hydrogen production with Mg chlorophyll-a by use of three component system consisting of NADPH, methylviologen and colloidal platinum was investigated. Triton X-100 and CTAB solubilized Mg chlorophyll-a solution were rapidly bleached by irradiation and 50% of Mg chlorophyll-a was degraded in 90 min irradiation. On the other hand, the decay rate of Mg chlorophyll-a concentration in the presence of NADPH was suppressed and the degradation rate was 15% in 90 min irradiation. The effective hydrogen production system was developed using CTAB solubilized Mg chlorophyll-a (2.7 {mu}mol in 4 h), compared with that using Triton X-100 solubilized Mg chlorophyll-a (0.1 {mu}mol in 4 h). (Author)

  8. Effects of manganese stress on growth and chlorophyll fluorescence parameters of Celosia argentea Linn%锰胁迫对青葙生长及叶绿素荧光特性的影响

    Institute of Scientific and Technical Information of China (English)

    尚伟伟; 刘杰; 张学洪; 余轲

    2013-01-01

    Celosia argentea Linn., an annual herb, was found to be a pioneer species on the Mn mine wasteland. To gain fundamental insights into the tolerance of C. argentea to Mn excess, 28-days-old plants grown in aerated nutrient solution were supplied with 2.5(control), 50, 100, 150, 200 and 300 mg·L-1 Mn and analyzed for chlorophyll contents, chlorophyll fluorescence parameters, height and root length. It was found that chlorophyll contents and chlorophyll fluorescence parameters were decreased with increased in Mn supply level. Chlorophyll a, chlorophyll b and total chlorophyll contents dropped significantly as Mn concentrations exceeded 50 mg·L-1; however, the contents of chlorophyll b did not significantly decreased at Mn concentrations ranging from 100 mg·L-1 to 300 mg·L-1 (p>0.05). The responses of chlorophyll fluorescence parameters in leaves of C. argentea showed that maximum quantum yield (Fv/Fm), maximum fluorescence(Fm), minimal fluorescence (Fo), effective quantum yield (EQY), electron transport rate (ETR) and photo chemical quenching (qP) were decreased by Mn stress. The reduction of chlorophyll fluorescence parameters indicated that Mn stress inhibited the electronic transfer process in the plants. At high manganese concentrations (150, 200, 300 mg·L-1), ETR EQY did not vary significantly, although qP decreased progressively with each increase in Mn supply concentration to 300 mg·L-1. Changes in the pattern of plant height were similar to those of ETR and EQY, while C. argentea suffered no significant reduction in root length until the Mn concentration reached 300 mg L-1. The results indicated that C. argentea has a high tolerance to manganese.%通过温室水培实验,研究在不同锰质量浓度(2.5、50、100、150、200、300 mg·L-1)胁迫下青葙(Celosia argentea Linn.)的叶绿素含量、叶绿素荧光参数的变化,及对其生长的影响,探究青葙对锰毒的耐性。结果表明,随着Mn2+质量浓度的升高,青葙叶

  9. The influence of thermohaline fronts on chlorophyll a concentrations during spring and summer in the southeastern Yellow Sea

    Institute of Scientific and Technical Information of China (English)

    JANG Pung-Guk; LEE Tong Sup; KANG Jung-Hoon; SHIN Kyoungsoon

    2013-01-01

    A spatial and temporal variation in physiochemical parameters in the southeastern Yellow Sea (YS) is in-vestigated in the spring and summer of 2009 to 2011. Nutrient show a strong negative relationship with chlorophyll a (Chl a ) concentration in spring, and the subsurface chlorophyll a maxima (SCM) layer was associated with the nitracline in summer. In summer, the SCM was usually found within or above the pyc-nocline and at the depths of shoals from the open sea to the coastal sea due to tidal and/or topographical fronts in the southernmost study area. High Chl a concentrations were found in the central southern YS, where the YS cold water layer expanded under the pycnocline and encountered water masses during spring and summer. After a typhoon in the summer of 2011, Chl a concentration increased, especially in the central southern YS, where cold waters occurred below the pycnocline. The results suggest that the development of thermohaline fronts may play an important role in the growth and accumulation of phytoplankton biomass in the upper layer of the southeastern YS during spring and summer.

  10. Picoliter droplet deposition using a prototype picoliter pipette: control parameters and application in micro X-ray fluorescence.

    Science.gov (United States)

    Fittschen, Ursula E A; Havrilla, George J

    2010-01-01

    In this study, we introduce a Hewlett-Packard prototype picoliter pipette, the "thermal inkjet picofluidic system" (TIPS), for analytical purposes. In contrast to the use of actual inkjet printers, this instrument allows for control of all energy and time settings. We are able to show that in contrast to techniques delivering microliter and nanoliter volumes, evaporation has a major influence on the deposition of picoliter volumes and has to be treated seriously when picoliter depositions are applied in the laboratory for calibration purposes. We developed a strategy to reduce evaporation by varying different parameters, thereby achieving a precision of less than 10% for elemental depositions ranging from 1 to 300 picoliters and 1 to 2000 pg elemental deposits. Additionally, we determined the performance of the micro X-ray fluorescence (MXRF) instruments in terms of limit of detection (LODs), focal spot size, sensitivity, and precision and evaluated the TIPS deposits as reference materials for MXRF using single and multielement solutions. A linear response was observed with correlation coefficients from 0.991 to 0.999 for elemental deposits on AP1 film, and there was a standard deviation from 1 to 40%, depending on the element and the mass deposited. LOD's for Ni deposits on AP1 films were found to range from low picogram levels to subpicogram levels. The dried deposits were characterized for size and shape using light microscopy and atomic force microscopy (AFM) to estimate matrix effects and the area covered with sample material for the MXRF analysis. Diameters from 14 to 39 microm and thicknesses from 200 nm to 2 microm were measured. The accuracy of the dried spot approach was demonstrated by comparing multielement deposits from the TIPS with the NIST SRMs 1833 and 1832 thin film standards for MXRF analysis. The deviation from the SRMs was found to be better than 10%.

  11. Relationships between nutrients and chlorophyll a concentration in the international Alma Gol Wetland, Iran

    Directory of Open Access Journals (Sweden)

    Saeed Balali

    2013-05-01

    Full Text Available This study investigated the relationships between nutrients and chlorophyll, a concentration in the International Alma Gol Wetland. Chlorophyll a is the major photosynthetic pigment in lots of phytoplanktons and has been used as a trophy index in aquatic ecosystems. Water samples were collected fortnightly from five stations in the wetland during summer and autumn. Chlorophyll-a ranged between 4.38 to 156.55 mg/m3, sulfate ranged between 138 to 190 mg/l, total alkalinity ranged between 80 to 280 mg/l, silica ranged between 3.80 to 35.00 mg/l, phosphate ranged between 0.02 to 3.70 mg/l, ammonia ranged between 0.10 to 11.90 mg/l, nitrate ranged between 0.01 to 2.75 mg/l and nitrite ranged between 0.01 to 0.39 mg/l. There was a significant correlation between chlorophyll a and nitrate, nitrite and ammonia but there was no significant correlation between chlorophyll a and silica, total alkalinity, sulfate and phosphorus.

  12. Chlorophyll a and chlorophyllide a inside liposomes made of saturated and unsaturated lipids: A possible impact of the lipids microenvironment

    Directory of Open Access Journals (Sweden)

    Petrović Sanja M.

    2014-01-01

    Full Text Available The aim of this work was to examine a possible impact of liposomes lipids microenvironment, dictated by a chemical composition of the fatty acid branches, on incorporation and spectral behaviour of chlorophyll a, and its derivative, chlorophyllide a inside small liposomes. The liposomes with the incorporated chlorophylls were made of dimirystoyl phosphatidylcholine (DMPC, and unsaturated phosphatidylcholine (PC, containing significant fractions of unsaturated fatty acid moieties. In order to achieve the goal, both absorption and fluorescence polarization spectroscopy were applied, and the obtained data for the two incorporated pigments, which play a role of molecular sensors, were compared. In addition, quercetin, a well-known antioxidant, was used as the (chlorophylls emission quencher, in order to estimate the type of environment sensed by the two pigments for the two liposomes that differ in chemical composition. The results, based primarily on fluorescence polarization data have shown that the emissions as well as the emission quenching were notably affected by a change in the lipids’ chemical composition. That is an indirect proof of the impact of the liposomes microenvironment on the incorporated pigments’ spectral behaviour.[ Projekat Ministarstva nauke Republike Srbije, br. TR-34012 i br. OI-172044

  13. Determination of double decker sanwich structured La—substituted chlorophyll a by EXAFS

    Institute of Scientific and Technical Information of China (English)

    W.Chen; Z.Wei; F.Hong; Y.Tao; G.Zhao; J.Yang; S.lkeda; J.Jiang; T.Hu

    2001-01-01

    As a representative naural porphyrin derivative,it is interesting to know the chemical form of lanthanide in chlorophyll a.We select the natural fern dicranopteris dichotoma,the most lanthanide-concentrated plant known,to isolate the chlorophyll a for our study. It is found by EXAFS that lanthanum substutes in the magnesium position in chorophyll and coordinates with the porphyrin ring.The lanthanum is seen to have a similar coordination structure to a sandwich-type lanthanide complex,with the La surrounded by eight nitrogen atoms from two porphyrin rings with average La-N bond length of 2.65A.

  14. Spatial variability of concentrations of chlorophyll a, dissolved organic matter and suspended particles in the surface layer of the Kara Sea in September 2011 from lidar data

    Science.gov (United States)

    Pelevin, V. V.; Zavjalov, P. O.; Belyaev, N. A.; Konovalov, B. V.; Kravchishina, M. D.; Mosharov, S. A.

    2017-01-01

    The article presents results of underway remote laser sensing of the surface water layer in continuous automatic mode using the UFL-9 fluorescent lidar onboard the R/V Akademik Mstislav Keldysh during cruise 59 in the Kara Sea in 2011. The description of the lidar, the approach to interpreting seawater fluorescence data, and certain methodical aspects of instrument calibration and measurement are presented. Calibration of the lidar is based on laboratory analysis of water samples taken from the sea surface during the cruise. Spatial distribution of chlorophyll a, total organic carbon and suspended matter concentrations in the upper quasi-homogeneous layer are mapped and the characteristic scales of the variability are estimated. Some dependencies between the patchiness of the upper water layer and the atmospheric forcing and freshwater runoff are shown.

  15. Chlorophyll-a, Orbview-2 SeaWiFS, 0.1 degrees, Global

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NASA GSFC Ocean Color Web distributes science-quality chlorophyll-a concentration data from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) on the Orbview-2...

  16. Cross-system comparison of factors influencing chlorophyll-a concentration in Oregon estuaries

    Science.gov (United States)

    Water column chlorophyll-a (chla) is a proxy for phytoplankton biomass and is often used as a biological response indicator of eutrophication. Although watershed nutrient loading may influence chla concentration in estuaries, factors such as freshwater inflow, residence time, and...

  17. Chlorophyll-a, Orbview-2 SeaWiFS, 0.0125 degrees, West US

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes chlorophyll-a concentration images from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) on the Orbview-2 satellite. Because data is...

  18. Chlorophyll 'a' particulate organic carbon and suspended load from the mangrove areas of Cochin backwaters

    Digital Repository Service at National Institute of Oceanography (India)

    Sheeba, P.; Devi, K.S.; Balasubramanian, T.; Sankaranarayanan, V.N.

    measured. Chlorophyll 'a'. Particulate Organic Carbon and suspended load were high at Puthuvypeen. The annual average for 6 stations ranged between 6.35 and 30.67 mg/m sup(3), 4.05 and 21.27 mg/l and 48.78 and 146.24 mg/l respectively. Seasonal variation...

  19. Seasonal distribution of chlorophyll-a in the Exclusive Economic Zone (EEZ) of India

    Digital Repository Service at National Institute of Oceanography (India)

    Sarupria, J.S.; Bhargava, R.M.S.

    measonal distribution of chlorophyll-a (chl-a)) in the different sectors of the EEZ of India was studied based on data from 430 stations over the period from 1962 to 1988. The annual average chl-a for the entire euphotic zone of EEZ was 12.0 mg m...

  20. Chlorophyll-a, Orbview-2 SeaWiFS, 0.04167 degrees, Alaska, Science Quality

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NASA GSFC Ocean Color Web distributes science-quality chlorophyll-a concentration data from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) on the Orbview-2...

  1. Studies on the red absorption band of chlorophyll a in vivo

    NARCIS (Netherlands)

    Thomas, J.B.; Kleinen Hammans, J.W.; Arnolds, W.J.

    1965-01-01

    It was studied whether certain earlier observed weak shoulders on the red absorption band of chlorophyll a in vivo might represent anomalies due to overlap of absorption bands. The results are suggested of the fact that no such anomalies occur. It is therefore concluded that the present study suppo

  2. MJO (Madden-Julian Oscillation) Analysis of the Chlorophyll-a Distribution in Western Waters Bengkulu

    Science.gov (United States)

    Haryanto, Y. D.; Fitrianti, N.; Hartoko, A.; Anggoro, S.; Zainuri, M.

    2017-02-01

    The global phenomenon Madden-Julian Oscillation (MJO) is one of the dominant oscillation in the equatorial region of the Indian Ocean that oscillates between 30-60 days and experience the process of convection movement from west to east. MJO has a correlation of high intensity rainfall of the area in its path. During his journey eastward, the MJO is influenced by the position of the sun. When the sun in the equatorial MJO moves straight east. Meanwhile, when the position of the sun in the south of the equator, MJO shifted slightly to the south of the equator, known as the propagation of the south-east (south-eastern propagation). When the position of the sun is in the north of the equator, MJO shifted slightly to the north of the equator, known as the propagation of the north-east (north-east of propagation). Waters west of Bengkulu has a huge potential in the fisheries sector, which is situated overlooking the Indian Ocean. The phenomenon MJO influence on rainfall, sea surface temperature, and the concentration of chlorophyll-a. This study aims to look at the temporal distribution of sea surface temperature and chlorophyll-a and decide how MJO relationship with SST and precipitation conditions and increasing the amount of chlorophyll during the phase of the MJO in Bengkulu waters. The dataset used is data of chlorophyll-a which download in oceancolor.gfsc.nasa.gov , sea surface temperature data is used is a model of Kaplan Extended V2, RMM1 index data and RMM2 on www.bom.gov.au and rainfall data of Bengkulu region. The method used is descriptive statistical methods, Conditional Probability and logistics regression. From the above explanation can be said that there is a relationship between the incidence of MJO by the number of chlorophyll-a. Odds the addition of chlorophyll-a have a linear relationship with the duration of the incident MJO in Bengkulu, odds increase the amount of chlorophyll-a in Bengkulu region reaches a threshold value of 0.5, it means that the

  3. Solvents effect on the absorption and fluorescence spectra of 7-diethylamino-3-thenoylcoumarin: evaluation and correlation between solvatochromism and solvent polarity parameters.

    Science.gov (United States)

    Basavaraja, Jana; Inamdar, S R; Suresh Kumar, H M

    2015-02-25

    Effect of solvents of varying polarities on absorption and fluorescence spectra and dipole moment of laser dye: 7-diethylamino-3-thenoylcoumarin (DETC) has been investigated. A small band shift is obtained in the absorption spectra compared to emission spectra. The spectral shifts were correlated with Catalan's parameters using linear solvation energy relationship. It reveals that non-specific interaction measured by solvent polarity has more influence on absorption and solvent dipolarity contribution is significant in case of fluorescence. A bathochromic shift observed in absorption and emission spectra with increasing solvent polarity, which implied that the transition involved is π→π(∗). The solvatochromic correlations were used to estimate the excited state dipole moment using experimentally determined ground state dipole moment. The observed single-state excited state dipole moment is found to be greater than the ground state.

  4. Assessment of chlorophyll-a concentration in the Gulf of Riga using hyperspectral airborne and simulated Sentinel-3 OLCI data

    Science.gov (United States)

    Jakovels, Dainis; Brauns, Agris; Filipovs, Jevgenijs; Taskovs, Juris; Fedorovicha, Dagnija; Paavel, Birgot; Ligi, Martin; Kutser, Tiit

    2016-08-01

    Remote sensing has proved to be an accurate and reliable tool in clear water environments like oceans or the Mediterranean Sea. However, the current algorithms and methods usually fail on optically complex waters like coastal and inland waters. The whole Baltic Sea can be considered as optically complex coastal waters. Remote assessment of water quality parameters (eg., chlorophyll-a concentration) is of interest for monitoring of marine environment, but hasn't been used as a routine approach in Latvia. In this study, two simultaneous hyperspectral airborne data and in situ measurement campaigns were performed in the Gulf of Riga near the River Daugava mouth in summer 2015 to simulate Sentinel-3 data and test existing algorithms for retrieval of Level 2 Water products. Comparison of historical data showed poor overall correlation between in situ measurements and MERIS chlorophyll-a data products. Better correlation between spectral chl-a data products and in situ water sampling measurements was achieved during simultaneous airborne and field campaign resulting in R2 up to 0.94 for field spectral data, R2 of 0.78 for airborne data. Test of all two band ratio combinations showed that R2 could be improved from 0.63 to 0.94 for hyperspectral airborne data choosing 712 and 728 nm bands instead of 709 and 666 nm, and R2 could be improved from 0.61 to 0.83 for simulated Sentinel-3 OLCI data choosing Oa10 and Oa8 bands instead of Oa11 and Oa8. Repeated campaigns are planned during spring and summer blooms 2016 in the Gulf of Riga to get larger data set for validation and evaluate repeatability. The main challenges remain to acquire as good data as possible within rapidly changing environment and often cloudy weather conditions.

  5. Effects of water stress and light intensity on chlorophyll fluorescence parameters and pigments of Aloe vera L.

    Science.gov (United States)

    Hazrati, Saeid; Tahmasebi-Sarvestani, Zeinolabedin; Modarres-Sanavy, Seyed Ali Mohammad; Mokhtassi-Bidgoli, Ali; Nicola, Silvana

    2016-09-01

    Aloe vera L. is one of the most important medicinal plants in the world. In order to determine the effects of light intensity and water deficit stress on chlorophyll (Chl) fluorescence and pigments of A. vera, a split-plot in time experiment was laid out in a randomized complete block design with four replications in a research greenhouse. The factorial combination of three light intensities (50, 75 and 100% of sunlight) and four irrigation regimes (irrigation after depleting 20, 40, 60 and 80% of soil water content) were considered as main factors. Sampling time was considered as sub factor. The first, second and third samplings were performed 90, 180 and 270 days after imposing the treatments, respectively. The results demonstrated that the highest light intensity and the severe water stress decreased maximum fluorescence (Fm), variable fluorescence (Fv)/Fm, quantum yield of PSII photochemistry (ФPSII), Chl and photochemical quenching (qP) but increased non-photochemical quenching (NPQ), minimum fluorescence (F0) and Anthocyanin (Anth). Additionally, the highest Fm, Fv/Fm, ФPSII and qP and the lowest NPQ and F0 were observed when 50% of sunlight was blocked and irrigation was done after 40% soil water depletion. Irradiance of full sunlight and water deficit stress let to the photoinhibition of photosynthesis, as indicated by a reduced quantum yield of PSII, ФPSII, and qP, as well as higher NPQ. Thus, chlorophyll florescence measurements provide valuable physiological data. Close to half of total solar radiation and irrigation after depleting 40% of soil water content were selected as the most efficient treatments.

  6. Correlation of tryptophan fluorescence intensity decay parameters with sup 1 H NMR-determined rotamer conformations: (tryptophan sup 2 )oxytocin

    Energy Technology Data Exchange (ETDEWEB)

    Ross, J.B.A.; Schwartz, G.P.; Laws, W.R. (Mount Sinai, New York, NY (United States)); Wyssbrod, H.R.; Porter, R.A. (Univ. of Louisville, KY (United States)); Michaels, C.A. (Swarthmore Coll., PA (United States))

    1992-02-18

    While the fluorescence decay kinetics of tyrosine model compounds can be explained in terms of heterogeneity derived from the three ground-state {chi}{sup 1} rotamers, a similar correlation has yet to be directly observed for a tryptophan residue. In addition, the asymmetric indole ring might also lead to heterogeneity from {chi}{sup 2} rotations. In this paper, the time-resolved and steady-state fluorescence properties of (tryptophan{sup 2})oxytocin at pH 3 are presented and compared with {sup 1}H NMR results. According to the unrestricted analyses of individual fluorescence decay curves taken as a function of emission wavelength-independent decay constants, only three exponential terms are required. In addition, the preexponential weighting factors (amplitudes) have the same relative relationship (weights) as the {sup 1}H NMR-determined {chi}{sup 1} rotamer populations of the indole side chain. {sup 15}N was used in heteronuclear coupling experiments to confirm the rotamer assignments. Inclusion of a linked function restricting the decay amplitudes to the {chi}{sup 1} rotamer populations in the individual decay curve analyses and in the global analysis confirms this correlation. According to qualitative nuclear Overhauser data, there are two {chi}{sup 2} populations.

  7. Spectral Feature Analysis for Quantitative Estimation of Cyanobacteria Chlorophyll-A

    Science.gov (United States)

    Lin, Yi; Ye, Zhanglin; Zhang, Yugan; Yu, Jie

    2016-06-01

    In recent years, lake eutrophication caused a large of Cyanobacteria bloom which not only brought serious ecological disaster but also restricted the sustainable development of regional economy in our country. Chlorophyll-a is a very important environmental factor to monitor water quality, especially for lake eutrophication. Remote sensed technique has been widely utilized in estimating the concentration of chlorophyll-a by different kind of vegetation indices and monitoring its distribution in lakes, rivers or along coastline. For each vegetation index, its quantitative estimation accuracy for different satellite data might change since there might be a discrepancy of spectral resolution and channel center between different satellites. The purpose this paper is to analyze the spectral feature of chlorophyll-a with hyperspectral data (totally 651 bands) and use the result to choose the optimal band combination for different satellites. The analysis method developed here in this study could be useful to recognize and monitor cyanobacteria bloom automatically and accrately. In our experiment, the reflectance (from 350nm to 1000nm) of wild cyanobacteria in different consistency (from 0 to 1362.11ug/L) and the corresponding chlorophyll-a concentration were measured simultaneously. Two kinds of hyperspectral vegetation indices were applied in this study: simple ratio (SR) and narrow band normalized difference vegetation index (NDVI), both of which consists of any two bands in the entire 651 narrow bands. Then multivariate statistical analysis was used to construct the linear, power and exponential models. After analyzing the correlation between chlorophyll-a and single band reflectance, SR, NDVI respetively, the optimal spectral index for quantitative estimation of cyanobacteria chlorophyll-a, as well corresponding central wavelength and band width were extracted. Results show that: Under the condition of water disturbance, SR and NDVI are both suitable for quantitative

  8. SPECTRAL FEATURE ANALYSIS FOR QUANTITATIVE ESTIMATION OF CYANOBACTERIA CHLOROPHYLL-A

    Directory of Open Access Journals (Sweden)

    Y. Lin

    2016-06-01

    Full Text Available In recent years, lake eutrophication caused a large of Cyanobacteria bloom which not only brought serious ecological disaster but also restricted the sustainable development of regional economy in our country. Chlorophyll-a is a very important environmental factor to monitor water quality, especially for lake eutrophication. Remote sensed technique has been widely utilized in estimating the concentration of chlorophyll-a by different kind of vegetation indices and monitoring its distribution in lakes, rivers or along coastline. For each vegetation index, its quantitative estimation accuracy for different satellite data might change since there might be a discrepancy of spectral resolution and channel center between different satellites. The purpose this paper is to analyze the spectral feature of chlorophyll-a with hyperspectral data (totally 651 bands and use the result to choose the optimal band combination for different satellites. The analysis method developed here in this study could be useful to recognize and monitor cyanobacteria bloom automatically and accrately. In our experiment, the reflectance (from 350nm to 1000nm of wild cyanobacteria in different consistency (from 0 to 1362.11ug/L and the corresponding chlorophyll-a concentration were measured simultaneously. Two kinds of hyperspectral vegetation indices were applied in this study: simple ratio (SR and narrow band normalized difference vegetation index (NDVI, both of which consists of any two bands in the entire 651 narrow bands. Then multivariate statistical analysis was used to construct the linear, power and exponential models. After analyzing the correlation between chlorophyll-a and single band reflectance, SR, NDVI respetively, the optimal spectral index for quantitative estimation of cyanobacteria chlorophyll-a, as well corresponding central wavelength and band width were extracted. Results show that: Under the condition of water disturbance, SR and NDVI are both suitable

  9. Molecular cloning and characterization of the light-harvesting chlorophyll a/b gene from the pigeon pea (Cajanus cajan).

    Science.gov (United States)

    Qiao, Guang; Wen, Xiao-Peng; Zhang, Ting

    2015-12-01

    Light-harvesting chlorophyll a/b-binding proteins (LHCB) have been implicated in the stress response. In this study, a gene encoding LHCB in the pigeon pea was cloned and characterized. Based on the sequence of a previously obtained 327 bp Est, a full-length 793 bp cDNA was cloned using the rapid amplification of cDNA ends (RACE) method. It was designated CcLHCB1 and encoded a 262 amino acid protein. The calculated molecular weight of the CcLHCB1 protein was 27.89 kDa, and the theoretical isoelectric point was 5.29. Homology search and sequence multi-alignment demonstrated that the CcLHCB1 protein sequence shared a high identity with LHCB from other plants. Bioinformatics analysis revealed that CcLHCB1 was a hydrophobic protein with three transmembrane domains. By fluorescent quantitative real-time polymerase chain reaction (PCR), CcLHCB1 mRNA transcripts were detectable in different tissues (leaf, stem, and root), with the highest level found in the leaf. The expression of CcLHCB1 mRNA in the leaves was up-regulated by drought stimulation and AM inoculation. Our results provide the basis for a better understanding of the molecular organization of LCHB and might be useful for understanding the interaction between plants and microbes in the future.

  10. A study on distribution of chlorophyll-a in the coastal waters of Anzali Port, south Caspian Sea

    Science.gov (United States)

    Jamshidi, S.; Abu Bakar, N. Bin

    2011-02-01

    Phytoplankton as chlorophyll-containing organisms is the first step of production in most marine processes and food chains. Nutrient enhancement in the seawater due to the discharge of agricultural, industrial, and urban wastes threatens the Caspian Sea environment. Increasing concentrations of chlorophyll-a in seawater, in reaction to the elevation of nutrient supply can have severely damaging effects on the marine environment of the Caspian. In this research, seasonal variability of the chlorophyll-a concentrations in the western part of the southern coastal waters of the Caspian Sea near Iranian coast was examined using field observations. The data showed that the most chlorophyll-a was found below the sea surface. The thermal stratification in water column and outflow of the Anzali Lagoon affect the chlorophyll-a concentrations in the region. Concentrations of chlorophyll-a were recorded in midsummer in a range of 0.2-3.4 mg m-3.

  11. The Characterization of Chlorophyll-A and Microalgae Isolation Process of Wastewater Collected at Sembrong Dam

    Science.gov (United States)

    Wellson, R.; Othman, N.; Matias-Peralta, H. M.

    2016-07-01

    Recently, there has been an increasing number of river water quality deterioration that has brought into water quality disruptions that entering dams including in Johor and one of them is occurred in Sembrong Dam in Johor. Sembrong Dam is a major water source for some 120,000 people in the districts of Kluang and parts of Batu Pahat. The quality of water in Sembrong should be well-monitored in ensuring the continuous distribution of clean and safe water supply to peoples. Based on the news reported by The Star news dated on 11 May 2015, the water bodies in Sembrong Dam are polluted by the algae blooms which has started to cause problems in treating water phase by clogging up the filters and causing the production to be reduced and finally resulting in frequent water disruptions to residents. Therefore, there is a need to study the water quality of the dam water prior to further water treatment. One of important characterizations is by measuring chlorophyll-a and the isolation of the dominant microalgae species in the water body in which they are able to indicate the level of water pollution. This paper presents the determination of chlorophyll-a and the isolation of microalgae strains collected from Sembrong Dam. Chlorophyll-a is a photosynthetic pigment present in all species of phytoplankton, including algae and in some photosynthetic bacteria, known as cyanobacteria. The method used in measuring the chlorophyll-a is based on the standard method of IS0 10 260. The average chlorophyll-a concentration measured at Sembrong Dam is 175.9 µg L-1 and it is responsible for the appearance of green color in the sample and it is categorized into hypereutrophic state which is highly polluted. The technique used for isolation of microalgae strains is traditional method which is by spreading the sample on agar. The pure isolate indicated that the genus Botryococcus is the dominant algae species which is characterized morphologically. Both chlorophyll-a and microalgae

  12. Application of Bayesian regularized BP neural network model for analysis of aquatic ecological data--A case study of chlorophyll-a prediction in Nanzui water area of Dongting Lake

    Institute of Scientific and Technical Information of China (English)

    XU Min; ZENG Guang-ming; XU Xin-yi; HUANG Guo-he; SUN Wei; JIANG Xiao-yun

    2005-01-01

    Bayesian regularized BP neural network(BRBPNN) technique was applied in the chlorophyll-a prediction of Nanzui water area in Dongting Lake. Through BP network interpolation method, the input and output samples of the network were obtained. After the selection of input variables using stepwise/multiple linear regression method in SPSS 11.0 software, the BRBPNN model was established between chlorophyll-a and environmental parameters, biological parameters. The achieved optimal network structure was 3-11-1 with the correlation coefficients and the mean square errors for the training set and the test set as 0.999 and 0.00078426, 0.981 and 0.0216 respectively. The sum of square weights between each input neuron and the hidden layer of optimal BRBPNN models of different structures indicated that the effect of individual input parameter on chlorophyll-a declined in the order of alga amount > secchi disc depth(SD) > electrical conductivity (EC) . Additionally, it also demonstrated that the contributions of these three factors were the maximal for the change of chlorophyll-a concentration, total phosphorus(TP) and total nitrogen(TN) were the minimal. All the results showed that BRBPNN model was capable of automated regularization parameter selection and thus it may ensure the excellent generation ability and robustness. Thus, this study laid the foundation for the application of BRBPNN model in the analysis of aquatic ecological data(chlorophyll-a prediction) and the explanation about the effective eutrophication treatment measures for Nanzui water area in Dongting Lake.

  13. Chlorophyll-a thin layers in the Magellan fjord system: The role of the water column stratification

    Science.gov (United States)

    Ríos, Francisco; Kilian, Rolf; Mutschke, Erika

    2016-08-01

    Fjord systems represent hotspots of primary productivity and organic carbon burial. However, the factors which control the primary production in mid-latitude fjords are poorly understood. In this context, results from the first fine-scale measurements of bio-oceanographic features in the water column of fjords associated with the Strait of Magellan are presented. A submersible fluorescence probe (FP) was used to measure the Chlorophyll-a (Chl-a) concentration in situ, along with conductivity, temperature, hydrostatic pressure (depth) and dissolved oxygen (CTD-O2) of the water column. The Austral spring results of 14 FP-CTD-O2 profiles were used to define the vertical and horizontal patches of the fluorescent pigment distribution and their spatial relations with respect to the observed hydrographic features. Three zones with distinct water structures were defined. In all zones, the 'brown' spectral group (diatoms and dinoflagellates) predominated accounting for >80 wt% of the phytoplankton community. Thin layers with high Chl-a concentration were detected in 50% of the profiles. These layers harbored a substantial amount (30-65 wt%) of the phytoplankton biomass. Stratification was positively correlated to the occurrence of Chl-a thin layers. In stable and highly stratified water columns the integrated Chl-a concentration was higher and frequently located within thin layers whereas well mixed water columns displayed lower values and more homogeneous vertical distribution of Chl-a. These results indicate that mixing/stability processes are important factors accounting to the vertical distribution of Chl-a in Magellan fjords.

  14. Is it possible to study the kinetic parameters of interaction between PNA and parallel and antiparallel DNA by stopped-flow fluorescence?

    Science.gov (United States)

    Barbero, N; Cauteruccio, S; Thakare, P; Licandro, E; Viscardi, G; Visentin, S

    2016-10-01

    Peptide nucleic acids (PNAs) are among the most interesting and versatile artificial structural mimics of nucleic acids and exhibit peculiar and important properties (i.e. high chemical stability, and a high resistance to cellular enzymes and nucleases). Despite their unnatural structure, they are able to recognize and bind DNA and RNA in a very high, specific and selective manner. One of the most popular, easy and reliable method to measure the stability of PNA-DNA hybrid systems is the melting temperature but the thermodynamic data are obtained using a big quantity of materials failing to provide information on the kinetics of the interaction. In the present work, the PNA decamer 6, with the TCACTAGATG sequence of nucleobases, and the corresponding fluorescent PNA-FITU (fluorescein isothiourea) decamer 8 were synthesized with standard manual Boc-based chemistry. The interaction of the PNA-FITU with parallel and antiparallel DNA has been studied by stopped-flow fluorescence, which is proposed as an alternative technique to obtain the kinetic parameters of the binding. The great advantage of using the stopped-flow technique is the possibility of studying the kinetics of the PNA-DNA duplex formation in a physiological environment. In particular, fluorescence stopped-flow technique has been exploited to compare the affinity of two PNA-DNA duplexes since it can discriminate between parallel and antiparallel DNA binding.

  15. A field study on solar-induced chlorophyll fluorescence and pigment parameters along a vertical canopy gradient of four tree species in an urban environment.

    Science.gov (United States)

    Van Wittenberghe, Shari; Alonso, Luis; Verrelst, Jochem; Hermans, Inge; Valcke, Roland; Veroustraete, Frank; Moreno, José; Samson, Roeland

    2014-01-01

    To better understand the potential uses of vegetation indices based on the sun-induced upward and downward chlorophyll fluorescence at leaf and at canopy scales, a field study was carried out in the city of Valencia (Spain). Fluorescence yield (FY) indices were derived for trees at different traffic intensity locations and at three canopy heights. This allowed investigating within-tree and between-tree variations of FY indices for four tree species. Several FY indices showed a significant (p alba (white mulberry) and Phoenix canariensis (Canary Island date palm). The upward FY parameters of M. alba, and the upward to downward ratios at 687 and 741 nm for both species, were significantly related to tree location. It was found that not the total chlorophyll (Chl) content, but rather the Chl a/b ratio showed the strongest correlations with several of the indices applied. Chl a/b was lowest at the bottom level of the highest traffic intensity location for both species due to an increased Chl b, indicating a larger light harvesting complex related to Photosystem II (LHCII) as a response to limiting light. The leaf deposits from traffic observed at this sampling location possibly led to a shading effect, resulting further in an adaptive response of the photosynthetic system and subsequent difference of FY indices. This study therefore indicated the importance of the size of LHCII on the fluorescence emission, observed under different traffic generated pollution conditions.

  16. Effect of Different Norms of Under-Mulch-Drip Irrigation on Diurnal Changes of Photosynthesis and Chlorophyll Fluorescence Parameter in High Yield Cotton of Xinjiang

    Institute of Scientific and Technical Information of China (English)

    ZHANG Wang-feng; REN Li-tong; WANG Zhen-lin; LI Shao-kun; GOU Ling; YU Songlie; CAO Lian-pu

    2003-01-01

    Under-mulch-drip irrigation is an advanced irrigation technique, which combines plastic-film-covered cultivation with drip irrigation. The influence of different norms of under-mulch-drip irrigation on di-urnal changes of photosynthetic rates and chlorophyll fluorescence parameters of cotton was studied, in orderto understand the physiological mechanisms of water-saving and high-yielding farming in Xinjiang. Results in-dicated that limited drip irrigation, which supplies 2/3 of 375 m3 ha-1 , the widely-used irrigation norm in cot-ton cultivation in Xinjiang, caused a water deficit in cotton field. Compared with the proper drip irrigation,the leaf photosynthetic rate under limited drip irrigation decreased during 9:00 to 11:00 a. m., and was sig-nificantly suppressed at midday, and then recovered afterwards. Using the chlorophyll fluorescence method,the absorption, transfer and transformation features of solar radiation by cotton leaf were investigated. Underlimited drip irrigation, the variable fluorescence (Fy) and primary light transfer efficiency of PSII (Fv/Fm)in cotton leaves were reduced because of the high light intensities and high temperatures at noon, and the de-crease in Xinluzao8 was greater than that in Xinluzao6. Therefore, it could be concluded that Xinluzao6 has ahigher drought-tolerance, and the Fv/Fm ratio could be used as a drought-resistance index for cotton.

  17. The evaluation of fish farming impact by nutrient content and chlorophyll A in Mala Lamljana bay

    Directory of Open Access Journals (Sweden)

    Jelic-Mrcelic Gorana

    2013-01-01

    Full Text Available This paper offers a brief review of the impacts of fish farming on the nutrient content and chlorophyll a in Mala Lamljana Bay, Croatia. Local loading of nitrogen and phosphorous compounds in fish farms can be very significant and can represent the largest source of N and P in a given area. Low N and P concentrations, low chlorophyll a concentration and a great variety of phytoplankton species were found in the bay, despite the high nutrient loading during the long history of farming in the bay. The phytoplankton community consisted mostly of diatoms and partly of dinoflagellates. Skeletonema costatum and Chaetoceros compressus were the dominant species (90% in summer chlorophyll, which is typical for Middle Adriatic oligotrophic coastal waters. Nevertheless, further studies are required to determine changes in water column factors and planktonic communities in this area.

  18. The optimal hyperspectral quantitative models for chlorophyll-a of chlorella vulgaris

    Science.gov (United States)

    Cheng, Qian; Wu, Xiuju

    2009-09-01

    Chlorophyll-a of Chlorella vulgaris had been related with spectrum. Based on hyperspectral measurement for Chlorella vulgaris, the hyperspectral characteristics of Chlorella vulgaris and their optimal hyperspectral quantitative models of chlorophyll-a (Chla) estimation were researched in situ experiment. The results showed that the optimal hyperspectral quantitative model of Chlorella vulgaris was Chla=180.5+1125787(R700)'+2.4 *109[(R700)']2 (P0Chlorella vulgaris, two reflectance crests were around 540 nm and 700 nm and their locations moved right while Chl-a concentration increased. The reflectance of Chlorella vulgaris decreases with Cha concentration increase in 540 nm, but on the contrary in 700nm.

  19. Sensitized Triplet Formation of Chlorophyll-A and beta-Carotene

    DEFF Research Database (Denmark)

    Jensen, Nina Mejlhede; Wilbrandt, Robert Walter; Pagsberg, Palle Bjørn

    1980-01-01

    The naphthalene-sensitized formation of triplet excited chlorophyll-a (Chl-a) and all-transß-carotene has been studied by pulse radiolysis. The rate constants for transfer of triplet energy from naphthalene to Chl-a and all-transß-carotene in benzene at 25°C are (3.6 ± 0.6)·109M-1 s-1 and (10.7 ± 1...

  20. Distribution of nutrients and chlorophyll a in the Three-Gorges Reservoir,China

    Institute of Scientific and Technical Information of China (English)

    LI Chongming; ZHANG Sheng; LIU Jinghong; WEI Shiqiang; ZHANG Yong; GAO Jixi

    2006-01-01

    The Three-Gorges Reservoir (TGR) is one of the largest water conservancy projects in the world. The status of nutrients and phytoplankton biomass has changed since the Three-Gorges Reservoir started water storage on June 1,2003. The distribution features of nutrients and chlorophyll a were deter mined by cruise monitoring during September 8 - 15, 2003. The results showed that the concentrations of dissolved total nitrogen (DTN) range from 1.01 to 1.35 mg · L-1, those of dissolved total phosphorus (DTP) from 0.028 to 0.054 mg · L-1. The concentrations of dissolved nitrogen and phosphorus exceed the eutrophication standards of OECD, and the ratio of DTN to DTP is over 16: 1. It is shown that phos phorus is an eutrophication-limiting element in the water body. The concentrations of potassium range from 2.80 to 3.44 mg · L-1; those of total organic carbon from 1.92 to 2.59 mg · L -1; those of chlorophyll a from 1.58 to 7.53 mg · m-3 with an average value of 4.69 mg · m-3 at surface layer. Atrophic gradient could be observed from the oligotropher to the mesotropher in the flow direction. Phytoplankton biomass in creased significantly in the reservoir area than before. A significant positive correlation (p < 0.05, r = 0. 728 ) between chlorophyll a and NO3-N and a significant negative correlation (p < 0. 01, r = -0.9207) between chlorophyll a and turbidity were also observed. Distribution features could be well divided into three clusters in terms of systematic cluster analyses, including the upper-stream area cluster, the middle stream area cluster and the down-stream area cluster.

  1. [A Three Band Chlorophyll-a Concentration Estimation Model Based on GOCI Imagery].

    Science.gov (United States)

    Guo, Yu-long; Li, Yun-mei; Li, Yuan; Lü, Heng; Liu, Ge; Wang, Xu-dong; Zhang, Si-min

    2015-09-01

    A GOCI-based three band model is proposed for chlorophyll-a concentration estimation based on the classical three band model. The model was built based on 289 in-situ measured chlorophyll-a concentration and hyperspectral spectrums-simulated GOCI spectrums, and was compared with MERIS-based three band model and GOCI band ratio model. At last, the model was validated using several GOCI images and an independent in-situ sampling dataset. The results showed that: (1) For the current dataset, the ratio of aph (680) and aph (660) was relatively stable. (2) The GOCI-based three band algorithm had a similar performance with MERIS-based three band algorithm in the modeling dataset. The R2 value of the GOCI-based three band model was 0. 809, which was a little lower than that of the MERIS-based three band model (R2 = 0. 820), but was obviously higher than that of GOCI band ratio model (R2 = 0. 450). (3) The performance of GOCI-based three band model in the validation dataset was similar with that in the modeling dataset, which was close to that of the MERIS-based three band model, and significantly better than that of GOCI band ratio model. (4) The GOCI image data validation indicated that GOCI band ratio model would clearly underestimate chlorophyll-a concentration in Taihu Lake. The spatial difference of chlorophyll-a concentration that yielded by the band ratio model was not clear. Compared with the widely used band ratio algorithm, the GOCI-based three band algorithm has higher stability, better accuracy, and stronger potential in application.

  2. Distinguishing between chlorophyll-a and suspended solids in lake water using hyperspectral data

    Science.gov (United States)

    Atkinson, Samuel F.; Acevedo, Miguel F.; Dickson, Kenneth L.; Rolbecki, David A.

    1998-12-01

    Classifying surface water bodies according to trophic status by remote sensing techniques has had limited success in lakes with relatively high nonalgal turbidity levels. Since the trophic status of a lake is typically defined based on its chlorophyll-a concentration, and since relatively high suspended solids concentrations masks chlorophyll absorption and reflectance peaks, determining trophic status remotely is typically only partially successful. Hoer, we were interested in exploring hyperspectral data analysis for estimating trophic status. Hyperspectral data (10 nm resolution between 262 and 850 nm) of light attenuation were measured in Lake Texoma, USA) at the surface, 0.1, 0.5, 1.0 and 1.5 meters in depth, while simultaneously analyzing the water column for chlorophyll-a and suspended solids concentration. Data were collected at five sampling stations, each representative of a major zone in the 36,000 hectare lake, approximately monthly, during 1996/97 hydrologic year. Downwelling and upwelling vertical attenuation coefficients were calculated using Bouger-Lambert's law. First and second order derivatives, as well as higher order derivatives were applied to the spectral data. The results showed a clear correlation between first order derivatives and turbidity, while the second order derivatives were correlated to chlorophyll-a concentrations.

  3. Retrieval of chlorophyll a and suspended solid concentrations by hyperspectral remote sensing in Taihu Lake,China

    Institute of Scientific and Technical Information of China (English)

    YANG Dingtian; PAN Delu; ZHANG Xiaoyu; ZHANG Xiaofeng; HE Xianqiang; LI Shujing

    2006-01-01

    Chlorophyll a (chl-a) and suspended solid concentrations are two frequently used water quality parameters for monitoring a lake. Traditional measurement of chl-a and suspended solids, requiring laborious laboratory work, which is often expensive and time consuming. Hyperspectral remote-sensing measurement provides a fast and easy tool for estimating water trophic status. In situ hyperspectral data on March 7-8, July 6-7, September 20 and December 7-8, 2004 and the corresponding water chemical data were used to regress the algorithm of water quality parameters. Results showed that the peak of water leaving radiance around 700 nm (R700) varied proportionally with chl-a concentration,and moved to infrared when algal bloom occurred. The reflectance ratio of R702/R685 was well correlated with chl-a when water surface in no algal bloom case and the correlation coefficient was better if absorption of phycocyanin was considered. The reflectance ratio R620/R531 was highly correlated to the concentration of suspended solids. The relationship between suspended solids and other band groups were also compared. Secchi disk depth could be calculated by non-linear correlation with suspended solids concentration.

  4. Water chlorophyll-a retrieval index based on hyperspectral data%基于高光谱数据的水体叶绿素a指数反演模型的建立

    Institute of Scientific and Technical Information of China (English)

    王金梁; 秦其明; 李军; 林丛; 徐若风; 高中灵

    2014-01-01

    水体叶绿素a含量是反映水体质量的重要指标之一,利用遥感技术监测其含量具有众多优势。该研究利用2012年7月在广西壮族自治区桂林市漓江流域实地采集的水体高光谱数据和实验室化验分析数据,借鉴陆表植被叶绿素a的遥感反演模型,发展了一种新的水体叶绿素a提取指数(water chlorophyll-a index,WCI)。通过与反射率敏感波段法、波段比值法和半分析方法对比分析发现,新提出的WCI指数使用650、685、696 nm波段,波段稳定,决定系数R2可达0.58,均方根误差最小为0.24,受水体悬浮物影响小,在天津海河区域的验证效果也表明了该模型可以有效地提取水体叶绿素 a 含量。该方法扩展了水体叶绿素 a 监测的建模思路,对水体叶绿素 a监测建模有一定的指导作用。%Water chlorophyll-a is one of the most important indices for water quality monitoring. Remote sensing technology has strong advantages in monitoring both water and vegetation chlorophyll-a concentrations. Most of the current study on water chlorophyll-a monitoring chose the sensitive band based on the water chlorophyll-a spectral characteristics, and then established the inversion model. Some researchers established the water parameters inversion model based on an analytical physical mechanism, which are more complex and difficult to use in practice. And we also noticed that a vertical comparative analysis was needed for all these different inversion methods in the same area, and a few researchers used the water chlorophyll-a absorption similarity with leaf to build the water chlorophyll-a retrieval model. In this paper, a new water chlorophyll-a retrival index WCI (Water Chlorophyll-a Index) was built from the land surface vegetation chlorophyll retrieval index MTCI (MERIS terrestrial chlorophyll index), based on the in-situ water hyperspectral data and water chlorophyll-a content results in the laboratory

  5. Effect of Drought Stress on Leaf Water Status, Electrolyte Leakage, Photosynthesis Parameters and Chlorophyll Fluorescence of Two Kochia Ecotypes (Kochia scoparia Irrigated With Saline Water

    Directory of Open Access Journals (Sweden)

    A Masoumi

    2012-12-01

    Full Text Available Rainfall deficiency and the development of salinity in Iran are the most important factors for using new salt and drought-resistant plants instead of conventional crops. Kochia species have recently attracted the attention of researchers as a forage and fodder crop in marginal lands worldwide due to its drought and salt tolerant characteristics. This field experiment was performed at the Salinity Research Station of Ferdowsi University of Mashhad, Iran, in a split plot based on randomized complete block design with three replications in 2008. Drought stress, including four levels (control, no irrigation in vegetative stage, no irrigation at reproductive stage and no irrigation at maturity stage for four weeks, and two Kochia ecotypes (Birjand and Borujerd were allocated as main and sub plots, respectively. Relative water content, electrolyte leakage, photosynthesis parameters and chlorophyll fluorescence were assayed every two week from late vegetative stage. Results showed that drought stress decreased significantly measured parameters in plants under stress, in all stages. Plants completely recovered after eliminating stress and rewatering and recovered plants did not show significant difference with control. Electrolyte leaking and chlorophyll fluorescence showed the lowest change among the measured parameters. It can emphasize that resistant to stress conditions in this plant and cell wall is not damaged at this level of stress situation. Birjand ecotype from the arid region, revealed a better response than Borujerd ecotype to drought stress. Probably it returns to initial adaptation of Birjand. In general this plant can recover after severe drought stress well. It is possible to introduce this plant as a new fodder in arid and saline conditions.

  6. Spatiotemporal chlorophyll-a dynamics on the Louisiana continental shelf derived from a dual satellite imagery algorithm

    Science.gov (United States)

    A monthly time series of remotely sensed chlorophyll-a (Chlars) over the Louisiana continental shelf (LCS) was developed and examined for its relationship to river discharge, nitrate concentration, total phosphorus concentration, photosynthetically available radiation (PAR), wind...

  7. 3个钓钟柳品种叶绿素荧光特性比较%Chlorophyll fluorescence parameters in three cultivars of Penstemon

    Institute of Scientific and Technical Information of China (English)

    陶文文; 蒋文伟; 赵丽娟

    2011-01-01

    The chlorophyll fluorescence parameters change of the Penstemon was studied, the aim was to enhance its planting management for the region in east China. Chlorophyll fluorescence parameters [minimal fluo rescence(Fo), maximum fluorescence (Fm), photochemical quenching (qp), variable fluorescence (Fv), yield (Y), non photochemical quenching (NPQ), and electron transport rate (ETR) ] of Penstemon campanulatus ‘Purple Passion' , Penstemon digitalis ‘Husker Red' , and Penstemon barbatus ‘Rondo' , all perennial root flowers, were measured and compared by the chlorophyll florescence measuring technique. A correlation analysis was conducted. Results of the correlation analysis showed significant positive correlations between Fo and Fm, qp and Fm, qp and Fv, Y and ETa, Fm and Fv, Fo and F, and Fm and Y; significantly negative correlations were found between Fo and ETR and Fv/Fo and Y. Also, chlorophyll fluorescence parameters for the three cultivars were significant(P < 0.05) and highly significant (P < 0.01 ). The values of Fv, Fv/Fm, Fv/Fo, Y,ETR, qp, and Nm for the three cultivars were in the order: ‘Purple Passion' > ‘Rondo' > ‘Husker Red'. Thus, the photosynthetic physiological functions of P. campanulatus ‘Purple Passion' were best.%利用叶绿素荧光测定技术测定了多年生宿根花卉紫红钓钟柳penstemon campanulatus'Purple Passion',毛地黄钓钟柳P.digitalis'Husker Red'和五彩钓钟柳P.barbatus'Rondo'等3个钓钟柳品种的叶绿素荧光参数,并对它们进行比较.结果表明:3个钓钟柳品种间的叶绿素荧光参数均达到显著或极显著水平,紫红钓钟柳的可变荧光(Fv),光系统Ⅱ原始光能转化效率(Fv/Fm),光系统Ⅱ的潜在活性(Fv/Fo),光合量子产额(Y),表观光合电子传递速率(ETR),光化学猝灭系数(qp),非炮化学猝灭系数(NPQ)值最高,其次为五彩钓钟柳,最低是毛地黄钓钟柳.说明紫红钓钟柳具有较好的光合生理功能,其次是五彩钓钟

  8. Photoprotective sites in the violaxanthin-chlorophyll a binding Protein (VCP) from Nannochloropsis gaditana.

    Science.gov (United States)

    Carbonera, Donatella; Agostini, Alessandro; Di Valentin, Marilena; Gerotto, Caterina; Basso, Stefania; Giacometti, Giorgio Mario; Morosinotto, Tomas

    2014-08-01

    Violaxanthin-chlorophyll a binding protein (VCP) is the major light harvesting complex (LHC) of the Heterokonta Nannochloropsis gaditana. It binds chlorophyll a, violaxanthin and vaucheriaxanthin, the last in the form of 19' deca/octanoate esters. Photosynthetic apparatus of algae belonging to this group have been poorly characterized in the past, but they are now receiving an increasing interest also because of their possible biotechnological application in biofuel production. In this work, isolated VCP proteins have been studied by means of advanced EPR techniques in order to prove the presence of the photoprotective mechanism based on the triplet-triplet energy transfer (TTET), occurring between chlorophyll and carotenoid molecules. This process has been observed before in several light harvesting complexes belonging to various photosynthetic organisms. We used Optically Detected Magnetic Resonance (ODMR) to identify the triplet states populated by photo-excitation, and describe the optical properties of the chromophores carrying the triplet states. In parallel, time-resolved EPR (TR-EPR) and pulse EPR have been employed to get insight into the TTET mechanism and reveal the structural features of the pigment sites involved in photoprotection. The analysis of the spectroscopic data shows a strong similarity among VCP, FCP from diatoms and LHC-II from higher plants. Although these antenna proteins have differentiated sequences and bind different pigments, results suggest that in all members of the LHC superfamily there is a protein core with a conserved structural organization, represented by two central carotenoids surrounded by five chlorophyll a molecules, which plays a fundamental photoprotective role in Chl triplet quenching through carotenoid triplet formation.

  9. Effects of Chilling Stress on Photosynthetic Rate and Chlorophyll Fluorescence Parameter in Seedlings of Two Rice Cultivars Differing in Cold Tolerance

    Institute of Scientific and Technical Information of China (English)

    WANG Guo-li; GUO Zhen-fei

    2005-01-01

    A cold-tolerant cultivar, Xiangnuo 1, and a cold-sensitive cultivar, IR50, were used to study the influence of chilling on photosynthetic rate and chlorophyll fluorescence parameters in rice seedlings. The photosynthetic rates declined dramatically during chilling, and decreased by 48.7% and 67.5% in Xiangnuo 1 and IR50 seedlings, respectively, after being subjected to chilling treatment for two days. Chlorophyll fluorescence measurements showed that relatively higher qP and qNP in Xiangnuo 1 were maintained to dissipate the redundant excitation energy and protect the reaction centers from chill injury; accordingly, redundant excitation energy accumulated less in the reaction centers, and antenna systems were less injured by chilling in Xiangnuo 1. On the contrary, in IR50, qP and qNP declined rapidly while Ex increased, as the chilling persisted. This result indicated that the reaction centers and antenna systems in IR50 were damaged severely by chilling, which led to the lower photosynthetic rate.

  10. [Effects of exogenous Ca2+ on morphological and photosynthetic characteristics and chlorophyll fluorescent parameters of squash seedlings under high temperature and strong light stress].

    Science.gov (United States)

    Qin, Shu-hao; Li, Ling-ling; Chen, Na-na

    2010-11-01

    Taking squash (Cucurbita pepo L.) variety Alan as test object, this paper studied the effects of exogenous Ca2+ on the morphological and photosynthetic characteristics and chlorophyll fluorescent parameters of squash seedlings under the cross-stress of high temperature and strong light. Under the stress, applying 5-20 mmol x L(-1) of Ca2+ increased the plant height, leaf area, chlorophyll and carotenoid contents, photosynthetic rate (Pn), stoma conductance (Gs), transpiration rate (Tr), maximal PS II efficiency (Fv/Fm), actual PS II efficiency (phi(PS II)), and photochemical queching coefficient (q(P)), and decreased the intercellular CO2 concentration (Ci) and non-photochemical fluorescence quenching coefficient (NPQ), suggesting that this application of exogenous Ca2+ could effectively mitigate the damage of high temperature and strong light stress on the squash seedlings leaf, and make it keep more rapid photosynthetic electron transfer rate and higher PS II electron transfer activity. Among the treatments of applying Ca2+, 10 mmol Ca2+ x L(-1) had the best effect. When the Ca2+ application rate exceeded 40 mmol x L(1), no mitigation effect was observed on the high temperature and strong light stress.

  11. Seasonal variability of phytoplankton fluorescence in relation to the Straits of Messina (Sicily) tidal upwelling

    Science.gov (United States)

    Azzaro, F.; Decembrini, F.; Raffa, F.; Crisafi, E.

    2007-10-01

    In the Straits of Messina, large gradients of tidal displacements, as well as the topographic constrictions, determine the upwelling of deeper waters in the surface layer. This work describes the seasonal variability in the surface distribution of phytoplankton biomass depending on the upwelling phenomena. Temperature, salinity, nitrates and phytoplankton fluorescence were measured in 1994 and 1995 by continuous underway surface real-time measurements onboard dedicated research boats. Each survey was performed following the dynamic phases of flooding and ebbing tides. Tidal currents are essentially southward during high tide and northward during low tide. During the low water slack tide, large spatial gradients of physical-chemical and biological parameters were found, while at the high water slack tide, a diffused phytoplankton fluorescence was observed only in autumn due to a seasonal thermocline. Salinity, nitrate and chlorophyll-a fluorescence data revealed a significant positive intercorrelation, whereas they were inversely correlated with temperature. Generally, the upwelling distribution was limited to narrow zones during winter, while in summer it was found in the middle of the Straits and in the southern zones. During spring in the southern zone of the Straits, the maximum chlorophyll-a fluorescence was detected (May 1995, 0.32 μg-Chla l-1); in summer, when back and forth tidal movements between the Tyrrhenian and the Ionian seas intensify, decreased values were observed throughout the study area. The data set obtained through continuous and repeatable samplings has allowed the study of different time-space scales in the Straits of Messina, a very strong and dynamic environment. The Straits system could be compared to an "intermittent pump" which, during the different seasons, initially enriches itself and subsequently provides nutrients to the surrounding basins.

  12. STUDY OF CHLOROPHYLL-A DISTRIBUTIONS IN LOMBOK STRAIT USING BIOGEOCHEMICAL MODEL BASED ON REGIONAL OCEAN MODELLING SYSTEM (ROMS

    Directory of Open Access Journals (Sweden)

    KADEK ARY ANGGRAENI

    2015-06-01

    Full Text Available Regional Ocean Modelling System (ROMS has been intended to be a multi-purpose, multi-disciplinary oceanic modeling tool. The Biogeochemical model have coupled to ROMS consists of a system of seven coupled partial differential equations that include: nitrate, ammonium, small and large detritus, phytoplanJ..'ton, zooplankton, and a dynamic phytoplanJ..-ton carbon to chlorophyll ratio. The study of distribution patterns of chlorophyll-a in Lombok Strait (-7 °N - ·10 •sand 114 "E - 117 °E in 2006 was analyzed using the Biogeochemical model based on ROMS. The results show that low chlorophyll-a distributions (0.20 mgChl-a/m3 observed in Lombok Strait in ,January. Chlorophyll-a estimated around the southern part of Bali Strait and low chlorophyll-a distribution in upper layer of the Lomhok Strait. Chlorophyll-a of the booming (0.32 mgChl-a/m3 observed in August. The northeast current direction moves to the west and southern part of research area through Lombok Strait. The highest chlorophyll-a concentration estimated in the northern and southwestern part of Bali Tsland and also in the southern part of Lombok Island. During dry monsoon, southeasterly wind blow from Australia generates upwelling process (low temperature and nutrient-rich water near the surface also estimated from ROMS.

  13. Lipase inhibitory activity of chlorophyll a, isofucosterol and saringosterol isolated from chloroform fraction of Sargassum thunbergii.

    Science.gov (United States)

    Kim, Koth-Bong-Woo-Ri; Kim, Min-Ji; Ahn, Dong-Hyun

    2014-01-01

    Three compounds (chlorophyll a, isofucosterol and saringosterol) were isolated from chloroform fraction of Sargassum thunbergii extract. The three compounds had two- to fourfold lower lipase inhibitory activity than that of the CHCl3:MeOH (C:M) (100:1) fraction (fraction I, 83.78% at 1 mg/mL). These results suggested that the high lipase inhibitory activity of fraction I was attributable to the actions of the three compounds. Therefore, S. thunbergii has potential for application as an anti-obesity agent.

  14. Influence of a tropical cyclone on chlorophyll-a concentration in the Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Subrahmanyam, B; Rao, K.H.; Rao, N.S.; Murty, V.S.N.

    -a and phytoplankton in the Arabian Sea and theprocessesinvolved,asexcellentlyreviewedbyBanseand English [2000]. This study is based on the IRS-P4 satellite observations of ocean color (Chlorophyll-a) during the development of a tropical cyclone (21–28 May 2001... for improving the manuscript. References Banse, K., and D. C. English, Geographical differences in seasonality of CZCS-derived phytoplankton pigment in the Arabian Sea for 1978–86, Deep-Sea Res. II, 47, 1623–1677, 2000. Bhattathiri, P. M. A., A. Pant, S. Sawant...

  15. The Unique Photophysical Properties of the Peridinin-Chlorophyll-a-Protein

    Science.gov (United States)

    Carbonera, Donatella; Valentin, Marilena Di; Spezia, Riccardo; Mezzetti, Alberto

    2014-01-01

    Peridinin-Chlorophyll-a-Proteins (PCPs) are water-soluble light harvesting complexes from dinoflagellates. They have unique light-harvesting and energy transfer properties which have been studied in details in the last 15 years. This review aims to give an overview on all the main aspects of PCPs photophysics, with an emphasis on some aspects which have not been reviewed in details so far, such as vibrational spectroscopy studies, theoretical calculations, and magnetic resonance studies. A paragraph on the present development of PCPs towards technological applications is also included. PMID:24678668

  16. A new method to estimate photosynthetic parameters through net assimilation rate-intercellular space CO2 concentration (A-Ci ) curve and chlorophyll fluorescence measurements.

    Science.gov (United States)

    Moualeu-Ngangue, Dany P; Chen, Tsu-Wei; Stützel, Hartmut

    2017-02-01

    Gas exchange (GE) and chlorophyll fluorescence (CF) measurements are widely used to noninvasively study photosynthetic parameters, for example the rates of maximum Rubisco carboxylation (Vcmax ), electron transport rate (J), daytime respiration (Rd ) and mesophyll conductance (gm ). Existing methods for fitting GE data (net assimilation rate-intercellular space CO2 concentration (A-Ci ) curve) are based on two assumptions: gm is unvaried with CO2 concentration in the intercellular space (Ci ); and light absorption (α) and the proportion of quanta absorbed by photosystem II (β) are constant in the data set. These may result in significant bias in estimating photosynthetic parameters. To avoid the above-mentioned hypotheses, we present a new method for fitting A-Ci curves and CF data simultaneously. This method was applied to a data set obtained from cucumber (Cucumis sativus) leaves of various leaf ages and grown under eight different light conditions. The new method had significantly lower root mean square error and a lower rate of failures compared with previously published methods (6.72% versus 24.1%, respectively) and the effect of light conditions on Vcmax and J was better observed. Furthermore, the new method allows the estimation of a new parameter, the fraction of incoming irradiance harvested by photosystem II, and the dependence of gm on Ci .

  17. Effect of arsenic on reflectance spectra and chlorophyll fluorescence of aquatic plants.

    Science.gov (United States)

    Iriel, Analia; Dundas, Gavin; Fernández Cirelli, Alicia; Lagorio, Maria G

    2015-01-01

    Arsenic pollution of groundwater is a serious problem in many regions of Latin America that causes severe risks to human health. As a consequence, non-destructive monitoring methodologies, sensitive to arsenic presence in the environment and able to perform a rapid screening of large polluted areas, are highly sought-after. Both chlorophyll - a fluorescence and reflectance of aquatic plants may be potential indicators to sense toxicity in water media. In this work, the effects of arsenic on the optical and photophysical properties of leaves of different aquatic plants (Vallisneria gigantea, Azolla filiculoides and Lemna minor) were evaluated. Reflectance spectra were recorded for the plant leaves from 300 to 2400 nm. The spectral distribution of the fluorescence was also studied and corrected for light re-absorption processes. Photosynthetic parameters (Fv/Fm and ΦPSII) were additionally calculated from the variable chlorophyll fluorescence recorded with a pulse amplitude modulated fluorometer. Fluorescence and reflectance properties for V. gigantea and A. filiculoides were sensitive to arsenic presence in contrast to the behaviour of L. minor. Observed changes in fluorescence spectra could be interpreted in terms of preferential damage in photosystem II. The quantum efficiency of photosystem II for the first two species was also affected, decreasing upon arsenic treatment. As a result of this research, V. gigantea and A. filiculoides were proposed as bioindicators of arsenic occurrence in aquatic media.

  18. Seasonal variability of seasurface chlorophyll-a of waters around Sri Lanka

    Indian Academy of Sciences (India)

    Kanthi K A S Yapa

    2000-12-01

    Remotely sensed data on ocean colour of waters surrounding Sri Lanka received from the Coastal Zone Colour Scanner (CZCS) are processed and analyzed. Raw data of 1 km resolution on relatively cloud free days during 1978-1986 are processed to produce sea surface chlorophyll maps within latitudes 4.5N-11N and longitudes 78E-85E, a region in the Indian Ocean surrounding Sri Lanka. The processed data include about 110 single day maps and composite averages for each month and season. The months of July, August and September are omitted in the calculation of averages due to insufficient data. The waters in the Gulf of Mannar and Palk Bay areas show high chlorophyll-a concentrations throughout the year. However, these high values may represent other suspended particles and dissolved organic matter besides chlorophyll-a as this region is shallow (< 100 m). Regions with high chlorophyll concentrations (>0:5 mg m-3) along the coast and western ocean region can be seen in the months of October and November, after the southwest monsoon period. As high surface chlorophyll concentrations may indicate high productivity, these regions need extensive measurements of primary production and also continuous monitoring of fish catches, during and after the southwest monsoon. Studies of particle composition in shallow water areas, in particular waters in Palk Bay and Gulf of Mannar, should be carried out in order to elucidate the effect of non-phytogenic.

  19. Locality of Chlorophyll-A Distribution in the Intensive Study Area of the Ariake Sea, Japan in Winter Seasons based on Remote Sensing Satellite Data

    Directory of Open Access Journals (Sweden)

    Kohei Arai

    2015-08-01

    Full Text Available Mechanism of chlorophyll-a appearance and its locality in the intensive study area of the Ariake Sea, Japan in winter seasons is clarified by using remote sensing satellite data. Through experiments with Terra and AQUA MODIS data derived chlorophyll-a concentration and truth data of chlorophyll-a concentration together with meteorological data and tidal data which are acquired for 6 years (winter 2010 to winter 2015, it is found that strong correlation between the chlorophyll-a concentration and tidal height changes. Also it is found that the relations between ocean wind speed and chlorophyll-a concentration. Meanwhile, there is a relatively high correlation between sunshine duration a day and chlorophyll-a concentration. Furthermore, it is found that there are different sources of chlorophyll-a in the three different sea areas of Ariake Sea area in the back, Isahaya bay area, and Kumamoto offshore area.

  20. Effects of NaCl Stress on Chlorophyll Fluorescence Parameters in Cinnamomum japonicum var. chenii%NaCl胁迫对普陀樟叶绿素荧光参数的影响

    Institute of Scientific and Technical Information of China (English)

    李影丽; 汪奎宏; 杜国坚; 许利群; 杨华; 肖纪军

    2008-01-01

    [Objective] Study on the changes of chlorophyll fluorescence parameters in Cinnamomum japonicum var. chenii under NaCl stress. [Method] The seedling growth increment, chlorophyll content and chlorophyll fluorescence parameters in leaves of 1-year old Cinnamomum japonicum var. chenii were investigated in field experiment. [Result] Under NaCl stress, seedling growth increment reduced and the chlorophyll content decreased to a stable value; changes of Fv/Fm and Fv/Fo showed identical increasing trend and double peak type. With the aggravation of salt stress, most variations were ob- served in Fo, correlations among chlorophyll fluorescence parameters presented "rise-drop" trend (in the treatment of 7 g/L NaCl). [Condusion] Cinna-momum japonicum var. chenii is endowed with strong salt resistance and wide adaptability.

  1. Varietal differences in photosynthetic characters and chlorophyll fluorescence induction kinetics parameters among intergeneric progeny derived from Oryza×Sorghum, its parents, and hybrid rice

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    A comparative study on the photosynthetic parameters among intergeneric progenies derived from Oryza sativa L.×Sorghum vulgare L., its maternal parent Gui 630 and commercial 3-line hybrid rice Shanyou 63 in pot experiment in greenhouse was conducted. The morphological and photosynthetic characters of canopy leaves and chlorophyll fluorescence kinetic parameters including Fv/Fm, Fv/F0, photochemical quenching coefficient and non-photochemical coefficient of canopy leaves of 3 varieties were measured. The results showed the progeny, Yuanyou 1, derived from an intergeneric cross of rice and sorghum possesses better canopy spatial architecture with thicker, heavier and bigger canopy leaf than its maternal parent Gui 630. Higher photosynthetic rate due to higher chlorophyll content, higher primary energy transformation efficiency, potential of PSII and non-photochemical quenching coefficient (qE) were also measured in Yuanyou 1. These explain partly why the intergeneric progeny has higher biomass production, and better tolerance to adverse conditions and higher field yields even under stress conditions.

  2. An Analysis of Chlorophyll Fluorescence Parameters and Protein Expression Levels in PSⅡof Cassava%华南系列木薯叶绿素荧光参数及光系统Ⅱ相关蛋白表达水平分析

    Institute of Scientific and Technical Information of China (English)

    陈霆; 李开绵; 安飞飞; 周建国; 魏艳

    2014-01-01

    以华南205( cv.SC205)为对照,研究7个华南系列木薯品种华南5号( cv.SC5)、华南6号( cv.SC6)、华南7号(cv.SC7)、华南8号(cv.SC8)、华南9号(cv.SC9)、华南10号(cv.SC10)、华南11号(cv.SC11)的叶绿素含量、叶绿素荧光参数及光系统Ⅱ( PSⅡ)中相关蛋白表达水平的差异。结果表明:SC6叶片叶绿素a、叶绿素b及总叶绿素含量均显著低于对照SC205及其它6个品种;叶绿素荧光参数中ΦPSⅡ显示8个木薯品种PSⅡ的实际光合效率Φ从高到低顺序为ΦSC5、ΦSC8、ΦSC9、ΦSC10、ΦSC205、ΦSC11、ΦSC7、ΦSC6。 Western Blot结果表明D1蛋白、放氧复合体(OEC)及核酮糖-1,5-二磷酸羧化酶/加氧酶(Rubisco)均在SC6叶片中表达最低,而在SC5、SC8、SC9叶片中表达较高。叶绿素荧光参数及PSⅡ相关蛋白可为高效选育木薯优良品种提供参考。%In order to detect the chlorophyll content ,chlorophyll fluorescence parameters and protein ex-pression levels related with PSⅡ in different cassava varieties , SCATC5 ( cv.SC5 ) , SCATC6 ( cv.SC6 ) , SCATC7 (cv.SC7),SCATC8 (cv.SC8),SCATC9 (cv.SC9),SCATC10 (cv.SC10),SCATC11 (cv.SC11), SCATC205 (cv.SC205) were studied in this experiment,and SC205 (cv.SC205) was the control as CK.The results showed that the contents of chlorophyll a ,chlorophyll b and total chlorophyll of SC 6 were significantly lower than that of the control cv .SC205 and those of the other six cassava varieties .The chlorophyll fluorescence parameters of ΦP SⅡ revealed that the actual photosynthetic efficiency order of 8 cassava varieties from high to low was ΦSC5 ,ΦSC8 ,ΦSC9 ,ΦSC10 ,ΦSC205 ,ΦSC11 ,ΦSC7 ,ΦSC6 .The western Blot results showed that the expression levels of D1 protein,oxygen-evolving complex ( OEC) and ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) were the lowest in cv.SC6 leaves,but higher in cv.SC5,cv.SC8,cv.SC9 leaves

  3. Measurement of X-ray-induced DNA double-strand breaks at various stages of the cell cycle using the total fluorescence as a comet assay parameter

    Energy Technology Data Exchange (ETDEWEB)

    Attia, Atef M.M. [Department of Biochemistry, Biophysical laboratory, National Research Center, Dokki, Cairo (Egypt); Nabil, Ghada M., E-mail: gmnabilnooh@hotmail.com [Department of Biochemistry, Biophysical laboratory, National Research Center, Dokki, Cairo (Egypt); Frankenberg, Dieter; Frankenberg-Schwager, M. [Abteilung Klinische Strahlenbiologie und Klinische Strahlenphysik, Zentrum, Radiologie, Georg-August-Universitaet Goettingen, Von-Siebold-Str.3 (Germany)

    2011-11-15

    The aim of the study was to develop a protocol for both estimating cell cycle position and the level of ionizing radiation-induced DNA dsb using the neutral comet assay. Using DNA histograms, cell cycle positions were determined for human dermal fibroblasts. The tail intensity was used to estimate the level of DNA damage induced by X-rays, at different positions of the cell cycle. The results of tail intensity versus DNA content bivariate analysis of exponentially growing cells showed a remarkable decrease in tail intensity with transition of cells from G1 to S-phase and increases slightly with transition to G2/M phase. This effect is observed at all doses including unirradiated cells, indicating that the effect is not caused by X-rays and the comet assay based on the current tail parameters is not relevant to measure DNA damage at various stages of the cell cycle. The results of dose response curves showed a linear decrease in the comet fluorescence with the X-ray dose. This observation provides a basis for estimating the fraction of damaged DNA, based on the fluorescence decrement induced by ionizing radiation. The results of this new approach showed a linear increase in DNA damage with dose, at various stages of the cell cycle, with rates, which vary in the following order G0>G2/M>S/G1 cells. These results suggest that G0 and G2/M cells are the most sensitive to X-rays among all phases of the cell cycle and suggest synchronization of cells at these phases to increase the cellular radiosensitivity during radiotherapy. - Display Omitted Highlights: > Increase in DNA damage with dose. > Introduction of a new technique for measuring DNA damage using a new approach of the neutral comet assay. > Estimation of DNA damage in mammalian cells.

  4. Measurement of X-ray-induced DNA double-strand breaks at various stages of the cell cycle using the total fluorescence as a comet assay parameter

    Science.gov (United States)

    Attia, Atef M. M.; Nabil, Ghada M.; Frankenberg, Dieter; Frankenberg-Schwager, M.

    2011-11-01

    The aim of the study was to develop a protocol for both estimating cell cycle position and the level of ionizing radiation-induced DNA dsb using the neutral comet assay. Using DNA histograms, cell cycle positions were determined for human dermal fibroblasts. The tail intensity was used to estimate the level of DNA damage induced by X-rays, at different positions of the cell cycle. The results of tail intensity versus DNA content bivariate analysis of exponentially growing cells showed a remarkable decrease in tail intensity with transition of cells from G1 to S-phase and increases slightly with transition to G2/M phase. This effect is observed at all doses including unirradiated cells, indicating that the effect is not caused by X-rays and the comet assay based on the current tail parameters is not relevant to measure DNA damage at various stages of the cell cycle. The results of dose response curves showed a linear decrease in the comet fluorescence with the X-ray dose. This observation provides a basis for estimating the fraction of damaged DNA, based on the fluorescence decrement induced by ionizing radiation. The results of this new approach showed a linear increase in DNA damage with dose, at various stages of the cell cycle, with rates, which vary in the following order G0>G2/M>S/G1 cells.These results suggest that G0 and G2/M cells are the most sensitive to X-rays among all phases of the cell cycle and suggest synchronization of cells at these phases to increase the cellular radiosensitivity during radiotherapy.

  5. Chlorophyll-a Estimation Around the Antarctica Peninsula Using Satellite Algorithms: Hints from Field Water Leaving Reflectance

    Directory of Open Access Journals (Sweden)

    Chen Zeng

    2016-12-01

    Full Text Available Ocean color remote sensing significantly contributes to our understanding of phytoplankton distribution and abundance and primary productivity in the Southern Ocean (SO. However, the current SO in situ optical database is still insufficient and unevenly distributed. This limits the ability to produce robust and accurate measurements of satellite-based chlorophyll. Based on data collected on cruises around the Antarctica Peninsula (AP on January 2014 and 2016, this research intends to enhance our knowledge of SO water and atmospheric optical characteristics and address satellite algorithm deficiency of ocean color products. We collected high resolution in situ water leaving reflectance (±1 nm band resolution, simultaneous in situ chlorophyll-a concentrations and satellite (MODIS and VIIRS water leaving reflectance. Field samples show that clouds have a great impact on the visible green bands and are difficult to detect because NASA protocols apply the NIR band as a cloud contamination threshold. When compared to global case I water, water around the AP has lower water leaving reflectance and a narrower blue-green band ratio, which explains chlorophyll-a underestimation in high chlorophyll-a regions and overestimation in low chlorophyll-a regions. VIIRS shows higher spatial coverage and detection accuracy than MODIS. After coefficient improvement, VIIRS is able to predict chlorophyll a with 53% accuracy.

  6. Influences of mass Chlorophyll-a blends using P3HT:PCBM for efficiency of organic solar cells

    Science.gov (United States)

    Lestari, E.; Supriyanto, A.; Iriani, Y.; Ramelan, A. H.; Nurosyid, F.

    2017-02-01

    Organic solar cells have been made using the material poly (3-hexylthiophene)(P3HT), [6, 6]-phenyl-C61-butyric acid methyl ester (PCBM), and Chlorophyll-a with blend metods. Active layer of P3HT:PCBM:Chlorophyll-a are deposited using spin coating with rotary speed of 2500 rpm for 10 seconds and subsequently heated at 1000C for 10 min. Mass of chlorophyll-a are 0.1 mg, 0.2 mg, and 0.3 mg. Thin layers are characterized by UV-Visible Spectrometer Lamda 25 for optical properties and Keithley 2602 for electrical properties. From the UV-Vis showed that absorbance of P3HT:PCBM:Chlorophyll-a are 400-614nm and 620-700 nm. Efficiency of P3HT:PCBM:Chlorophyll-a for mass chlorophyll 0.1 mg, 0.2 mg, and 0.3 mg are 2.68 x 10-2 %, 3.93 x 10-2 %, and 8.79 x 10-2 % respectively.

  7. Metabolic alterations of lutein, β-carotene and chlorophyll a during germination of two soybean sprout varieties.

    Science.gov (United States)

    Lee, Jinwook; Hwang, Young-Sun; Lee, Jeong-Dong; Chang, Woo-Suk; Choung, Myoung-Gun

    2013-12-01

    The metabolic changes of lutein, β-carotene and chlorophyll a during germination of the soybean (Glycine max (L.) Merr.) sprout varieties, 'Pungsannamulkong' and 'Bosug', have been studied. Seeds were germinated at 20 °C with 80% humidity in the darkness and sampled at 2 day intervals for 10 days. Partial least squares (PLS) scores plot showed that the responses of three metabolites during germination were linearly linked with each other except for day 2 in both varieties. PLS loading plots indicated that lutein content in whole sprout and cotyledon was closely associated with germination in 'Pungsannamulkong' while the chlorophyll a content in whole sprouts was highly linked with germination in 'Bosug'. Heatmap analyses revealed that lutein and β-carotene levels, but not those of chlorophyll a, accumulated in whole soybean sprouts and cotyledon. While hypocotyls did not accumulate lipophilic pigments during germination, the accumulation of lutein and β-carotene in the cotyledons was greater in 'Pungsannamulkong' than in 'Bosug' sprouts. In addition, the contents of lutein, β-carotene and chlorophyll a increased from those in the seeds. Overall, the metabolic changes of lutein, β-carotene and chlorophyll a during germination are affected not only by variety but also by organ type.

  8. Excitation energy transfer and charge separation are affected in Arabidopsis thaliana mutants lacking light-harvesting chlorophyll a/b binding protein Lhcb3.

    Science.gov (United States)

    Adamiec, Małgorzata; Gibasiewicz, Krzysztof; Luciński, Robert; Giera, Wojciech; Chełminiak, Przemysław; Szewczyk, Sebastian; Sipińska, Weronika; van Grondelle, Rienk; Jackowski, Grzegorz

    2015-12-01

    The composition of LHCII trimers as well as excitation energy transfer and charge separation in grana cores of Arabidopsis thaliana mutant lacking chlorophyll a/b binding protein Lhcb3 have been investigated and compared to those in wild-type plants. In grana cores of lhcb3 plants we observed increased amounts of Lhcb1 and Lhcb2 apoproteins per PSII core. The additional copies of Lhcb1 and Lhcb2 are expected to substitute for Lhcb3 in LHCII trimers M as well as in the LHCII "extra" pool, which was found to be modestly enlarged as a result of the absence of Lhcb3. Time-resolved fluorescence measurements reveal a deceleration of the fast phase of excitation dynamics in grana cores of the mutant by ~15 ps, whereas the average fluorescence lifetime is not significantly altered. Monte Carlo modeling predicts a slowing down of the mean hopping time and an increased stabilization of the primary charge separation in the mutant. Thus our data imply that absence of apoprotein Lhcb3 results in detectable differences in excitation energy transfer and charge separation.

  9. On extreme atmospheric and marine nitrogen fluxes and chlorophyll-a levels in the Kattegat Strait

    DEFF Research Database (Denmark)

    Hasager, C.B.; Carstensen, J.; Ellermann, T.

    2003-01-01

    A retrospective analysis is carried out to investigate the importance of the vertical fluxes of nitrogen to the marine sea surface layer in which high chlorophyll a levels may cause blooms of harmful algae and subsequent turn over and oxygen depletion at the bottom of the sea. Typically nitrogen...... are calculated by the periodic maximum method and the results are successfully compared to a map of chlorophyll return periods based on in-situ observations. The one-year return of extreme atmospheric wet deposition is around 60 mg N m(-2) day(-1) and 30 mg N m(-2) day(-1) for deep-water entrainment. Atmospheric......-water entrainment forced by high winds greatly exceeds the atmospheric pool of nitrogen washed out by precipitation. At the frontal zone of the Kattegat Strait and Skagerrak, the nitrogen deep-water entrainment is very high and this explains the high 10-year return chlorophyll level at 8 mg m(-3) in the Kattegat...

  10. Bio-hydrogen Production Using the Visible Light-harvesting Function of Chlorophyll-a

    Energy Technology Data Exchange (ETDEWEB)

    Yutaka Amao; Noriko Himeshima [Department of Applied Chemistry, Oita University, Dannoharu 700, Oita 870-1192, (Japan)

    2006-07-01

    A Bio-hydrogen production system, coupling D-maltose hydrolysis by gluco-amylase and glucose dehydrogenase (GDH) and hydrogen production with platinum nano-particle colloid catalyst using the photo-sensitization based on the visible light harvesting of Mg chlorophyll-a (Mg Chl-a), was developed. Hydrogen gas was continuously produced when the reaction mixture containing D-maltose, gluco-amylase, GDH, nicotinamide adenine dinucleotide (NAD+), Mg Chl-a, methyl-viologen (MV2+) and platinum nano-particle colloid was irradiated by visible light. The amount of hydrogen production was estimated to be 5.0 {mu}mol after 4 h irradiation and the yield of conversion of D-maltose to hydrogen gas was about 1.8%. The quantum yield was 3.1%. (authors)

  11. Associations between chlorophyll a and various microcystin health advisory concentrations [version 2; referees: 1 approved, 2 approved with reservations

    Directory of Open Access Journals (Sweden)

    Jeffrey W. Hollister

    2016-06-01

    Full Text Available Cyanobacteria harmful algal blooms (cHABs are associated with a wide range of adverse health effects that stem mostly from the presence of cyanotoxins. To help protect against these impacts, several health advisory levels have been set for some toxins. In particular, one of the more common toxins, microcystin, has several advisory levels set for drinking water and recreational use. However, compared to other water quality measures, field measurements of microcystin are not commonly available due to cost and advanced understanding required to interpret results. Addressing these issues will take time and resources. Thus, there is utility in finding indicators of microcystin that are already widely available, can be estimated quickly and in situ, and used as a first defense against high levels of microcystin. Chlorophyll a is commonly measured, can be estimated in situ, and has been shown to be positively associated with microcystin. In this paper, we use this association to provide estimates of chlorophyll a concentrations that are indicative of a higher probability of exceeding select health advisory concentrations for microcystin. Using the 2007 National Lakes Assessment and a conditional probability approach, we identify chlorophyll a concentrations that are more likely than not to be associated with an exceedance of a microcystin health advisory level. We look at the recent US EPA health advisories for drinking water as well as the World Health Organization levels for drinking water and recreational use and identify a range of chlorophyll a thresholds. A 50% chance of exceeding one of the specific advisory microcystin concentrations of 0.3, 1, 1.6, and 2 μg/L is associated with chlorophyll a concentration thresholds of 23, 68, 84, and 104 μg/L, respectively. When managing for these various microcystin levels, exceeding these reported chlorophyll a concentrations should be a trigger for further testing and possible management action.

  12. Varietal differences in photosynthetic characters and chlorophyll fluorescence induction kinetics parameters among intergeneric progeny derived from Oryza×Sorghum, its parents, and hybrid rice

    Institute of Scientific and Technical Information of China (English)

    KatsuyoshiShimizu; 唐建军; 陈欣

    2002-01-01

    A comparative study on the photosynthetic parameters among intergeneric progenies derived from Oryza sativa L.× Sorghum vulgare L. , its maternal parent Gui 630 and commercial 3-line hybrid rice Shanyou 63 in pot experiment in greenhouse was conducted. The morphological and photosynthetic characters of canopy leaves and chlorophyll fluorescence kinetic pm'mneters including Fv/Fm, Fv/F0, photochemical quenching coefficient and non-photochemical coefficient of canopy leaves of 3 varieties were measured. The results showed the progeny, Yuanyou 1, derived from an intergeneric cross of rice and sorghum possesses better canopy spatial architecture with thicker, heavier and bigger canopy leaf than its maternal parent Gui 630.Higher photosynthetic rate due to higher chlorophyll content, higher primary energy transformation efficiency,potential of PSII and non-photochemieal quenching coefficient (qE) were also measured in Yuanyou 1. These explain partly why the intergeneric progeny has higher biomass production, and better tolerance to adverse conditions and higher field yields even under stress conditions.

  13. Combining Principal Component Regression and Artificial Neural Network to Predict Chlorophyll-a Concentration of Yuqiao Reservoir’s Outflow

    Institute of Scientific and Technical Information of China (English)

    张旋; 王启山; 于淼; 吴京

    2010-01-01

    In order to investigate the eutrophication degree of Yuqiao Reservoir, a hybrid method, combining principal component regression (PCR) and artificial neural network (ANN), was adopted to predict chlorophyll-a concentration of Yuqiao Reservoir’s outflow. The data were obtained from two sampling sites, site 1 in the reservoir, and site 2 near the dam. Seven water variables, namely chlorophyll-a concentration of site 2 at time t and that of both sites 10 days before t, total phosphorus(TP), total nitrogen(TN),...

  14. Insight into the photosynthetic apparatus in evergreen and deciduous European oaks during autumn senescence using OJIP fluorescence transient analysis.

    Science.gov (United States)

    Holland, V; Koller, S; Brüggemann, W

    2014-07-01

    Climate change is one of the major issues nowadays, and Mediterranean broadleaf species have been suggested to fill possible future gaps created by climate change in Central European forests. To provide a scientific-based foundation for such practical strategies, it is important to obtain a general idea about differences and similarities in the physiology of Central European and Mediterranean species. In the present study, we evaluated the onset of leaf senescence of a broad spectrum of oak species under the Central European climate in a common garden experiment. Degradation of the photosynthetic apparatus of evergreen (Quercus ilex, Q. suber), semi-evergreen (Q.×turneri, Q.×hispanica) and deciduous oaks (Q. robur, Q. cerris, Q. frainetto, Q. pubescens) was monitored as chlorophyll content and analysed chlorophyll fluorescence induction transients. In the deciduous species, a significant decline in chlorophyll content was observed during autumn/winter, with Q. pubescens showing the slowest decline. Analysis of fluorescence induction transients revealed a significant decline in quantum efficiency of the primary photochemistry and reaction centre density and later, a decrease in quantum efficiency of end acceptor reduction. Alterations in fluorescence parameters were compared to the decline in chlorophyll content, which occurred much more slowly than expected from the fluorescence data. The evergreen species showed no decline in chlorophyll content, nor different chlorophyll a fluorescence induction behaviour despite temperature falling below 0 °C. The hybrids showed intermediate behaviour between their parental evergreen and deciduous taxa.

  15. A Structurally Simplified Hybrid Model of Genetic Algorithm and Support Vector Machine for Prediction of Chlorophyll a in Reservoirs

    Directory of Open Access Journals (Sweden)

    Jieqiong Su

    2015-04-01

    Full Text Available With decreasing water availability as a result of climate change and human activities, analysis of the influential factors and variation trends of chlorophyll a has become important to prevent reservoir eutrophication and ensure water supply safety. In this paper, a structurally simplified hybrid model of the genetic algorithm (GA and the support vector machine (SVM was developed for the prediction of monthly concentration of chlorophyll a in the Miyun Reservoir of northern China over the period from 2000 to 2010. Based on the influence factor analysis, the four most relevant influence factors of chlorophyll a (i.e., total phosphorus, total nitrogen, permanganate index, and reservoir storage were extracted using the method of feature selection with the GA, which simplified the model structure, making it more practical and efficient for environmental management. The results showed that the developed simplified GA-SVM model could solve nonlinear problems of complex system, and was suitable for the simulation and prediction of chlorophyll a with better performance in accuracy and efficiency in the Miyun Reservoir.

  16. Chlorophyll-a, Orbview-2 SeaWiFS, 0.04167 degrees, West US, Science Quality

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NASA GSFC Ocean Color Web distributes science-quality chlorophyll-a concentration data from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) on the Orbview-2...

  17. Relationship of fouling diatom number and chlorophyll-a value from Zuari estuary, Goa (west coast of India)

    Digital Repository Service at National Institute of Oceanography (India)

    Redekar, P.D.; Wagh, A

    of cell biomass of fouling diatoms and the chlorophyll -a value observed over a period of 4 days of immersion of glass slide panel in 1 m depth in the estuarine environment in Zuari estuary. Generally. diatom number showed increasing trend from 1st to 4th...

  18. An overview of remote sensing of chlorophyll fluorescence

    Science.gov (United States)

    Xing, Xiao-Gang; Zhao, Dong-Zhi; Liu, Yu-Guang; Yang, Jian-Hong; Xiu, Peng; Wang, Lin

    2007-03-01

    Besides empirical algorithms with the blue-green ratio, the algorithms based on fluorescence are also important and valid methods for retrieving chlorophyll-a concentration in the ocean waters, especially for Case II waters and the sea with algal blooming. This study reviews the history of initial cognitions, investigations and detailed approaches towards chlorophyll fluorescence, and then introduces the biological mechanism of fluorescence remote sensing and main spectral characteristics such as the positive correlation between fluorescence and chlorophyll concentration, the red shift phenomena. Meanwhile, there exist many influence factors that increase complexity of fluorescence remote sensing, such as fluorescence quantum yield, physiological status of various algae, substances with related optical property in the ocean, atmospheric absorption etc. Based on these cognitions, scientists have found two ways to calculate the amount of fluorescence detected by ocean color sensors: fluorescence line height and reflectance ratio. These two ways are currently the foundation for retrieval of chlorophyl l - a concentration in the ocean. As the in-situ measurements and synchronous satellite data are continuously being accumulated, the fluorescence remote sensing of chlorophyll-a concentration in Case II waters should be recognized more thoroughly and new algorithms could be expected.

  19. NW Adriatic Sea variability in relation to chlorophyll-a dynamics in the last 20 years (1986–2005

    Directory of Open Access Journals (Sweden)

    F. Acri

    2007-02-01

    Full Text Available This paper presents a long-term time series (1986–2005 of hydrological and biogeochemical data, both published and unpublished. Data were collected in the north-western area of the Adriatic Sea, at two stations that are considered hydrodynamically and trophically different. The time series have been statistically and graphically investigated on a monthly scale in order to find not only possible chlorophyll-a trends over time, but also links between the concentrations of chlorophyll-a and the variability in the environment, as well as trophic differences between the two areas. Basically, in both cases the statistical test results show no significant trends in either the average chlorophyll-a values or in dispersion of the data, in contrast with significant trends in temperature and salinity. The two areas have similar hydrological features, yet they present significant differences in the amount of nutrient inputs: these are in fact higher at the coastal site, which is characterized by a prevalence of surface blooms, while they are lower at the offshore station, which is mainly affected by intermediate blooms. Nonetheless, throughout the whole water column, chlorophyll-a concentrations are only slightly different. Both areas are affected by riverine discharge, though in the first case considered chlorophyll-a concentrations are also driven strongly by the seasonal cycle. Finally, the results show that the two stations are not trophically different, although some controlling factors, such as zooplankton grazing in one case and light attenuation in the other, may regulate the growth of phytoplankton.

  20. Environmental and climactic effects of chlorophyll-a variability around Iceland using reconstructed satellite data fields

    Science.gov (United States)

    McGinty, Niall; Guðmundsson, Kristinn; Ágústsdóttir, Kristín; Marteinsdóttir, Gudrún

    2016-11-01

    While remotely sensed data greatly improves the spatial and temporal resolution of ocean surface data, many data gaps still exist, particularly in northern latitude regions. We addressed this issue by reconstructing 8-day chl-a, sea surface temperature (SST) and photosynthetically available radiation (PAR) between 1998 and 2013. Direct matchups between the interpolated and in-situ chlorophyll-a data showed stronger correlations when both data types were combined although very little variation was found for the root mean square error across space and time. Chl-a shows a strong periodicity in the south and a weak periodicity in seasonal cycle in the north. Where periodicity is strong we found that correlations with the local environmental conditions were also the strongest. Wavelet coherence patterns showed that the phase correlation between SST, chl-a and NAO was dominated by an annual periodicity in the trends although the chl-a-NAO relationship was only significant after 2005. Ten regions were defined based on the k-means clustering of chl-a. Mean spring anomalies and the phenological timing of chl-a were defined for each region. The main drivers of spring anomalies were mean SST and PAR values while the spring timing was strongly correlated with the timing of MLD and PAR reaching threshold levels.

  1. Distribution of chlorophyll-a off the Changjiang River and its dynamic cause interpretation

    Institute of Scientific and Technical Information of China (English)

    ZHU; Jianrong

    2005-01-01

    An interdisciplinary comprehensive survey was conducted in August 2000 with the modern measurement instruments off the Changjiang River. The analysis of the observation data shows that there exist two sources of phytoplankton blooms off the Changjiang River. The one with wider spatial extent and stronger intensity appears in the surface plume due to photosynthesis produced by the eutrophication brought by a huge amount of nutrient load via the Changjiang River and well light penetration because of lower turbidity seawater. Photosynthesis produces chlorophyll-a (Chl-a), meanwhile releases oxygen and absorbs carbon dioxide, so the high Chl-a concentration distribution corresponds to the distribution of high dissolved oxygen and pH.The other with smaller spatial extent and weaker intensity exists in the thermocline in the Taiwan Warm Current (TWC), but the high Chl-a concentration does not correspond to the high dissolved oxygen and pH, which may be a result of long distance advection by the TWC. The eutrophication associated with the huge amount of nutrient flowing into the sea via the Changjiang River is the main cause of the red tide bloom in the area off the Changjiang River, the red tide that occurred along the Fujian and Zhejiang coast can influence the area off the Changjiang River possibly via the TWC. The distributions of current simulated by a three-dimension numerical model support the above conclusion.

  2. Evaluation of Satellite Retrievals of Ocean Chlorophyll-a in the California Current

    Directory of Open Access Journals (Sweden)

    Mati Kahru

    2014-09-01

    Full Text Available Retrievals of ocean surface chlorophyll-a concentration (Chla by multiple ocean color satellite sensors (SeaWiFS, MODIS-Terra, MODIS-Aqua, MERIS, VIIRS using standard algorithms were evaluated in the California Current using a large archive of in situ measurements. Over the full range of in situ Chla, all sensors produced a coefficient of determination (R2 between 0.79 and 0.88 and a median absolute percent error (MdAPE between 21% and 27%. However, at in situ Chla > 1 mg m−3, only products from MERIS (both the ESA produced algal_1 and NASA produced chlor_a maintained reasonable accuracy (R2 from 0.74 to 0.52 and MdAPE from 23% to 31%, respectively, while the other sensors had R2 below 0.5 and MdAPE higher than 36%. We show that the low accuracy at medium and high Chla is caused by the poor retrieval of remote sensing reflectance.

  3. An assessment of phytoplankton primary productivity in the Arctic Ocean from satellite ocean color/in situ chlorophyll-a based models.

    Science.gov (United States)

    Lee, Younjoo J; Matrai, Patricia A; Friedrichs, Marjorie A M; Saba, Vincent S; Antoine, David; Ardyna, Mathieu; Asanuma, Ichio; Babin, Marcel; Bélanger, Simon; Benoît-Gagné, Maxime; Devred, Emmanuel; Fernández-Méndez, Mar; Gentili, Bernard; Hirawake, Toru; Kang, Sung-Ho; Kameda, Takahiko; Katlein, Christian; Lee, Sang H; Lee, Zhongping; Mélin, Frédéric; Scardi, Michele; Smyth, Tim J; Tang, Shilin; Turpie, Kevin R; Waters, Kirk J; Westberry, Toby K

    2015-09-01

    We investigated 32 net primary productivity (NPP) models by assessing skills to reproduce integrated NPP in the Arctic Ocean. The models were provided with two sources each of surface chlorophyll-a concentration (chlorophyll), photosynthetically available radiation (PAR), sea surface temperature (SST), and mixed-layer depth (MLD). The models were most sensitive to uncertainties in surface chlorophyll, generally performing better with in situ chlorophyll than with satellite-derived values. They were much less sensitive to uncertainties in PAR, SST, and MLD, possibly due to relatively narrow ranges of input data and/or relatively little difference between input data sources. Regardless of type or complexity, most of the models were not able to fully reproduce the variability of in situ NPP, whereas some of them exhibited almost no bias (i.e., reproduced the mean of in situ NPP). The models performed relatively well in low-productivity seasons as well as in sea ice-covered/deep-water regions. Depth-resolved models correlated more with in situ NPP than other model types, but had a greater tendency to overestimate mean NPP whereas absorption-based models exhibited the lowest bias associated with weaker correlation. The models performed better when a subsurface chlorophyll-a maximum (SCM) was absent. As a group, the models overestimated mean NPP, however this was partly offset by some models underestimating NPP when a SCM was present. Our study suggests that NPP models need to be carefully tuned for the Arctic Ocean because most of the models performing relatively well were those that used Arctic-relevant parameters.

  4. Temporal fluctuations of the Sea Surface Temperature and Chlorophyll-a along of coral reef systems located on the Western coastal zone of the Gulf of Mexico

    Science.gov (United States)

    de Jesús Salas Pérez, José; Ocaña Valencia, Angel; González Gandara, Carlos

    2014-05-01

    On the coastal zone of the western Gulf of Mexico (GM), there are a variety of coral reef systems which are influenced by river discharge and macro-scale circulation of the GM. The goal of this study is determine if the main fluctuations of the chlorophyll-a and sea surface temperature values (measured from monthly satellite images of sensors Aqua Modis and NOAA-AVHRR in the period of 2008-2011) in coral reef systems, are determined by river discharges or macro-scale circulation of the basin. Moreover determine if the temporal fluctuations of those parameters are correlated between them and thus asses the relationship between them. The most norther coral reef system (Lobos) is classified as mesotrophic-eutrophic. The middle coral reef system (Tuxpan) is ranked as oligotrophic-mesotrophic. Toward the southern region of the western littoral of the GM the coral reefs systems (PNSAV and Coatzacoalcos) are classified as eutrophic. Regarding to Sea Surface Temperature (SST) fluctuations, all coral reef systems showed an almost similar behavior, winter is the season with cool waters (19-23°C). Then in spring, the temperature values increases to about 25°C. Summer season have warm waters (29-30°C). Slightly different, fall decrease their water temperatures to 28°C. The northern coral reef systems (Lobos-Tuxpan) are colder than that the coral reef systems of the southern region (PNSAV-Coatzacoalcos). Those fluctuations, in chlorophyll-a and SST are induced by cyclonic and anticyclonic gyres generated in the Loop current, which impact in the northern region, while the southern region is influenced by river discharge and the presence of a cyclonic gyre of the Campeche bay. But northern and southern coral reef systems are mainly affected by waters of the northern GM advected by winds blowing from the north, mainly in winter.

  5. Method 446.0: In Vitro Determination of Chlorophylls a, b, c + c and Pheopigments in 1 2Marine And Freshwater Algae by Visible Spectrophotometry

    Science.gov (United States)

    This method provides a procedure for determination of chlorophylls a (chl a), b (chl b), c + c 1 2 (chl c + c ) and pheopigments of chlorophyll a (pheo a) 1 2 found in marine and freshwater phytoplankton. Chlorophyllide a is determined as chl a. Visible wavelength spectrophotomet...

  6. Remote estimation of chlorophyll-a concentration in turbid water using a spectral index: a case study in Taihu Lake, China

    Science.gov (United States)

    Cheng, Chunmei; Wei, Yuchun; Lv, Guonian; Yuan, Zhaojie

    2013-01-01

    Chlorophyll-a concentration (Chla) is a key indicator of water quality, and accurate estimates of Chla using remote sensing data remain challenging in turbid waters. Previous research has demonstrated the feasibility of retrieving Chla in vegetation using spectral index, which may be the potential reference for Chla inversion in turbid waters. In this study, 106 hyperspectral indices, including vegetation, fluorescence, and trilateral indices, as well as combinations thereof, are calculated based on the in situ spectra data of 2004 to 2011 in Taihu Lake, China, to explore their potential use in turbid waters. The results show that the normal chlorophyll index (NCI) (R690/R550-R675/R700)/(R690/R550+R675/R700) is optimal for Chla estimation, with a determination coefficient (R) of 0.92 and a root mean square error (RMSE) of 14.36 mg/m3 for the data from July to August 2004, when Chla ranged from 7 to 192 mg/m3. Validation using the datasets of 2005, 2010, and 2011 shows that after reparameterization, the NCI model yields low RMSEs and is more robust than the three- and four-band algorithms. The results indicate that the NCI model can satisfactorily estimate Chla in multiple datasets without the need of additional band tuning.

  7. The effects of detergents DDM and β-OG on the singlet excited state lifetime of the chlorophyll a in cytochrome b6f complex from spinach chloroplasts

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The singlet excited state lifetime of the chlorophyll a (Chl a) in cytochrome b6f (Cyt b6f) complex was reported to be shorter than that of free Chl a in methanol, but the value was different for Cyt b6f com-plexes from different sources (~200 and ~600 ps are the two measured results). The present study demonstrated that the singlet excited state lifetime is associated with the detergents n-dodecyl-β-D- maltoside (DDM) and n-octyl-β-D-glucopyranoside (β-OG), but has nothing to do with the different sources of Cyt b6f complexes. Compared with the Cyt b6f dissolved in β-OG, the Cyt b6f in DDM had a lower fluorescence yield, a lower photodegradation rate of Chl a, and a shorter lifetime of Chl a excited state. In short, the singlet excited state lifetime, ~200 ps, of the Chl a in Cyt b6f complex in DDM is closer to the true in vivo.

  8. The effects of detergents DDM and β-OG on the singlet excited state lifetime of the chlorophyll a in cytochrome b6f complex from spinach chloroplasts

    Institute of Scientific and Technical Information of China (English)

    CHEN XiaoBo; ZHAO XiaoHui; ZHANG JianPing; LI LiangBi; KUANG TingYun

    2007-01-01

    The singlet excited state lifetime of the chlorophyll a (Chi a) in cytochrome b6f (Cyt b6f) complex was reported to be shorter than that of free Chl a in methanol, but the value was different for Cyt b6f complexes from different sources (~200 and ~600 ps are the two measured results). The present study demonstrated that the singiet excited state lifetime is associated with the detergents n-dodecyl-β-D-maltoside (DDM) and n-octyl-β-D-glucopyranoside (β-OG), but has nothing to do with the different sources of Cyt b6f complexes. Compared with the Cyt b6f dissolved in β-OG, the Cyt b6f in DDM had a lower fluorescence yield, a lower photodegradation rate of Chl a, and a shorter lifetime of Chl a excited state. In short, the singlet excited state lifetime, ~200 ps, of the Chl a in Cyt b6f complex in DDM is closer to the true in vivo.

  9. Enigmatic relationship between chlorophyll a concentrations and photosynthetic rates at Station ALOHA.

    Science.gov (United States)

    Laws, E A; Bidigare, R R; Karl, D M

    2016-09-01

    An ordinary least squares (OLS) analysis of the relationship between chlorophyll a (chl a) concentrations and photosynthetic rates at depths of 5 and 25 m at Station ALOHA produced a slope that was only 28% of the mean productivity index at those depths and an intercept at zero chl a that equaled 70% of the mean photosynthetic rate. OLS regression lines are known to produce a slope and intercept that are biased estimates of the true slope and intercept when the explanatory variable, X, is uncontrolled, but in this case the measurement errors and natural variability of the chl a concentrations were much too small to explain the apparent bias. The bias was traceable to the fact that the photosynthetic rates were determined by more than one explanatory variable, a source of variability that is typically overlooked in discussions of OLS bias. Modeling the photosynthetic rates as a function of the product of chl a and surface irradiance produced a much more accurate and realistic description of the data, but the OLS continued to be biased, presumably because the photosynthetic rates were functions of factors in addition to chl a and surface irradiance (e.g., temperature, macronutrients, trace metals, and vitamins). The results underscore the need to recognize that the absence of bias in an OLS when X is not controlled implies that all scatter in the data about the OLS is due to errors in the dependent variable, an unlikely scenario. In most cases, resolution of the bias problem will require identification of the explanatory variables in addition to X that determine the dependent variable.

  10. Assessing the influence of watershed characteristics on chlorophyll a in waterbodies at global and regional scales

    Science.gov (United States)

    Woelmer, Whitney; Kao, Yu-Chun; Bunnell, David; Deines, Andrew M.; Bennion, David; Rogers, Mark W.; Brooks, Colin N.; Sayers, Michael J.; Banach, David M.; Grimm, Amanda G.; Shuchman, Robert A.

    2016-01-01

    Prediction of primary production of lentic water bodies (i.e., lakes and reservoirs) is valuable to researchers and resource managers alike, but is very rarely done at the global scale. With the development of remote sensing technologies, it is now feasible to gather large amounts of data across the world, including understudied and remote regions. To determine which factors were most important in explaining the variation of chlorophyll a (Chl-a), an indicator of primary production in water bodies, at global and regional scales, we first developed a geospatial database of 227 water bodies and watersheds with corresponding Chl-a, nutrient, hydrogeomorphic, and climate data. Then we used a generalized additive modeling approach and developed model selection criteria to select models that most parsimoniously related Chl-a to predictor variables for all 227 water bodies and for 51 lakes in the Laurentian Great Lakes region in the data set. Our best global model contained two hydrogeomorphic variables (water body surface area and the ratio of watershed to water body surface area) and a climate variable (average temperature in the warmest model selection criteria to select models that most parsimoniously related Chl-a to predictor variables quarter) and explained ~ 30% of variation in Chl-a. Our regional model contained one hydrogeomorphic variable (flow accumulation) and the same climate variable, but explained substantially more variation (58%). Our results indicate that a regional approach to watershed modeling may be more informative to predicting Chl-a, and that nearly a third of global variability in Chl-a may be explained using hydrogeomorphic and climate variables.

  11. Chlorophyll a in Arctic sediments implies long persistence of algal pigments

    Science.gov (United States)

    Pirtle-Levy, Rebecca; Grebmeier, Jacqueline M.; Cooper, Lee W.; Larsen, Ingvar L.

    2009-08-01

    Sediment cores were collected from the shelf, slope, and basin of the Bering, Chukchi, and Beaufort Seas during May-June (under ice cover) and July-August (largely ice-free) 2004. Measurements of chlorophyll a (chl a), total organic carbon (TOC), and C/N ratios were made in surface and some subsurface core increments. Surface sediment chl a decreased with increasing water depth. Significant positive correlations were found between chl a and TOC and chl a and C/N ratios in the basin (>2000 m), but there were significant negative correlations between chl a and C/N ratios on the shelf (⩽200 m). Chl a values generally declined in down-core profiles, but in some deeper slope and basin cores, measurable inventories of subsurface chl a were present at depth. In some cases, these subsurface chlorophyll inventories coincident with peak activities of the anthropogenic radionuclide 137Cs were detected, which had maximal deposition following the atmospheric nuclear weapons testing era in the 1960s. A sedimentation rate independently determined for one of these cores using 210Pb was consistent with the depths of subsurface 137Cs peaks in slope sediments reflecting steady, relatively undisturbed deposition over a several-decade period. The depth of penetration of 137Cs in some continental slope sediments, together with detectable chl a, suggests that chl a can be buried in some of these deeper-water sediments under cold conditions for decadal periods in the absence of deposit feeders. Because organic deposition from the water column is episodic at high latitudes and concentrated following the spring bloom, these buried sources of organic materials, whether on the shelf or in deeper basin sediments, may ultimately be important for benthic invertebrates that could utilize this food source during times of the year when primary production flux from the overlying water column is reduced.

  12. Relationship of Northeast Atlantic albacore juveniles with surface thermal and chlorophyll-a fronts

    Science.gov (United States)

    Sagarminaga, Y.; Arrizabalaga, H.

    2014-09-01

    When the spring seasonal warming starts, North Atlantic albacore (Thunnus alalunga) juveniles and pre-adults perform a trophic migration to the northeastern Atlantic, to the Bay of Biscay, and to the southeast of Ireland. During this migration, albacore juveniles are mainly exploited by Spanish trolling and baitboat fleets. The present study analyzes the relationship between the albacore spatio-temporal distribution and the upper surface horizontal fronts in their migration paths and destinations. For this, albacore catches from personal fishing logbooks from Basque trolling and live-bait fleets and daily MODIS AQUA Chlorophyll-a and SST products covering the period 2003-2005 have being used. Gradients have been calculated with the front algorithm proposed by Belkin and O'Reilly (2009). The approach used to study the relationship of catches location with frontal areas is based in the comparison of distributions of gradient magnitude around catch locations versus gradient magnitudes in a Monthly Occupation Area. The results obtained show that there is a high spatio- temporal variability of SST and Chl-a fronts in the area. SST and Chl-a fronts are not coincident in time or in space. However, there is a clear seasonal pattern of SST and Chl-a frontal activity in the area with a peak in July for SST gradient magnitudes and a peak in April for Chl-a gradient magnitudes. The relationship of albacore juvenile catches with high gradient magnitude areas is different according to the months and fleets analysed. In general, there is no evidence of consistent adherence of albacore catches to areas with higher SST gradients. However, results suggest a potential association between both fleets catches and Chl-a high gradient magnitude areas in August and September.

  13. Characterisation of estuarine intertidal macroalgae by laser-induced fluorescence

    DEFF Research Database (Denmark)

    Gameiro, Carla; Utkin, Andrei B.; Sousa Dias Cartaxana, Paulo Jorge

    2015-01-01

    spectra were determined by differences in the main fluorescing pigments: phycoerythrin, phycocyanin and chlorophyll a (Chl a). In the green and brown macroalgae groups, the relative significance of the two emission maxima seems to be related to the thickness of the photosynthetic layer. In thick...... macroalgae, like Codium tomentosum or Fucus vesiculosus, the contribution of the far-red emission fluorescence peak was more significant, most probably due to re-absorption of the emitted red Chl a fluorescence within the dense photosynthetic layer. Similarly, an increase in the number of layers of the thin...

  14. Spectral absorption coefficient of phytoplankton and its relation to chlorophyll a and remote sensing reflectance in coastal waters of southern China

    Institute of Scientific and Technical Information of China (English)

    CAO Wenxi; YANG Yuezhong; LIU Sheng; XU Xiaoqiang; YANG Dingtian; ZHANG Jianlin

    2005-01-01

    The spectral absorption coefficient of phytoplankton in coastal waters of southern China is investigated. Large variations in the absorption coefficient of phytoplankton are found. The absorption coefficient of phytoplankton at 443 nm ranged from 0. 006 m- 1 to 0. 484 m - 1, with an average value of 0. 067 m - 1. The chlorophyll-specific absorption coefficient of phytoplankton is also a bio-optical varito pigment composition of phytoplankton and package effect. The chlorophyll-specific absorption coefficient of phytoplankton decreases with the increasing of chlorophyll a concentration. This relationship can be described by a power law function, with the parameters and the coefficient of determination r2 as functions of wavelength, but the parameters describing the relationships in present study differed from that in Case 1 waters, thus the regional adjustment of model parameters was of particular significance for improving the accuracy of bio-optical algorithms for estimation of Chl-a concentration and primary production from remotely sensed data. Regression analysis of reflectance (R rs) ratio and absorption coefficient of phytoplankton (a ph) indicates a close correlation between them, which means that it is possible to retrieve absorption coefficient of phytoplankton using ocean color remote sensing data in optically complex coastal waters.

  15. Spatial Heterogeneity of Ice Cover Sediment and Thickness and Its Effects on Photosynthetically Active Radiation and Chlorophyll-a Distribution: Lake Bonney, Antarctica

    Science.gov (United States)

    Obryk, M.; Doran, P. T.; Priscu, J. C.; Morgan-Kiss, R. M.; Siebenaler, A. G.

    2012-12-01

    The perennially ice-covered lakes in the McMurdo Dry Valleys, Antarctica have been extensively studied under the Long Term Ecological Research project. But sampling has been spatially restricted due to the logistical difficulty of penetrating the 3-6 m of ice cover. The ice covers restrict wind-driven turbulence and its associated mixing of water, resulting in a unique thermal stratification and a strong vertical gradient of salinity. The permanent ice covers also shade the underlying water column, which, in turn, controls photosynthesis. Here, we present results of a three-dimensional record of lake processes obtained with an autonomous underwater vehicle (AUV). The AUV was deployed at West Lake Bonney, located in Taylor Valley, Dry Valleys, to further understand biogeochemical and physical properties of the Dry Valley lakes. The AUV was equipped with depth, conductivity, temperature, under water photosynthetically active radiation (PAR), turbidity, chlorophyll-and-DOM fluorescence, pH, and REDOX sensors. Measurements were taken over the course of two years in a 100 x 100 meter spaced horizontal sampling grid (and 0.2 m vertical resolution). In addition, the AUV measured ice thickness and collected 200 images looking up through the ice, which were used to quantify sediment distribution. Comparison with high-resolution satellite QuickBird imagery demonstrates a strong correlation between aerial sediment distribution and ice cover thickness. Our results are the first to show the spatial heterogeneity of lacustrine ecosystems in the McMurdo Dry Valleys, significantly improving our understanding of lake processes. Surface sediment is responsible for localized thinning of ice cover due to absorption of solar radiation, which in turn increases total available PAR in the water column. Higher PAR values are negatively correlated with chlorophyll-a, presenting a paradox; historically, long-term studies of PAR and chlorophyll-a have shown positive trends. We hypothesized

  16. Phytoplankton size class derived from phytoplankton absorption and chlorophyll-a concentrations in the northern South China Sea

    Institute of Scientific and Technical Information of China (English)

    WANG Guoqing; CAO Wenxi; WANG Guifen; ZHOU Wen

    2013-01-01

    A previously developed model was modified to derive three phytoplankton size classes (micro-,nano-,and pico-phytoplankton) from the overall chlorophyll-a concentration,assuming that each class has a specific absorption coefficient.The modified model performed well using in-situ data from the northern South China Sea,and the results were reliable and accurate.The relative errors of the size-fractioned chlorophyll-a concentration for each size class were:micro-:21%,nano-:41%,pico-:26%,and nano+pico:23%.The model was then applied on ocean color remote sensing data to examine the distribution and variation of phytoplankton size classes in northern South China Sea on a large scale.

  17. Effect of Chlorophyll-a Spatial Distribution on Upper Ocean Temperature in the Central and Eastern Equatorial Pacific

    Institute of Scientific and Technical Information of China (English)

    LIN Pengfei; LIU Hailong; ZHANG Xuehong

    2008-01-01

    Effect of the spatial distributions of chlorophyll-a concentration on upper ocean temperature and currents in the equatorial Pacific is investigated through a set of numerical experiments by using an ocean general circulation model. This study indicates that enhanced meridional gradient of chlorophylloa between the equator and off-equatorial regions can strengthen zonal circulation and lead to a decrease in equatorial sea surface temperature (SST). However, the circulation changes by themselves are not effective enough to affect SST in the equatorial cold tongue (CT) region. The comparison between the experiments indicates that the CT SST are more sensitive to chlorophyll-a distribution away from the equator. The off-equatorial chlorophyll-a traps more solar radiation in the mixed layer, therefore, the temperature in the thermocline decreases. The cold water can then be transported to the equator by the meridional circulation within the mixed layer. Furthermore, the relation among CT SST, the surface heat flux, and the equatorial upwelling are discussed. The study implies the simulation biases of temperature on the equator are not only related to the local ocean dynamics but also related to some deficiency in simulating off-equatorial processes.

  18. Complex interactions among nutrients, chlorophyll-a, and microcystins in three stormwater wet detention basins with floating treatment wetlands.

    Science.gov (United States)

    Hartshorn, Nicholas; Marimon, Zachary; Xuan, Zhemin; Cormier, Jessica; Chang, Ni-Bin; Wanielista, Martin

    2016-02-01

    Stormwater wet detention ponds hold a permanent pool of water and offer many beneficial uses including flood mitigation, pollution prevention, downstream erosion control, increased aesthetics, and recreational uses. Although the removal of nutrients is generally low for stormwater wet detention ponds in urban areas, floating treatment wetlands (FTWs) can be installed to offer an innovative solution toward naturally removing excess nutrients and aiding in stormwater management. To improve the stormwater reuse potential, this study assessed nutrient, microcystin, and chlorophyll-a interactions in three Florida stormwater wet detention ponds with recently implemented FTWs. Both episodic (storm events) and routine (non-storm events) sampling campaigns were carried out at the three ponds located in Ruskin, Gainesville, and Orlando. The results showed a salient negative correlation between total phosphorus and microcystin concentrations for both storm and non-storm events across all three ponds. The dominant nutrient species in correlation seemed to be total phosphorus, which correlated positively with chlorophyll-a concentrations at all ponds and sampling conditions, with the exception of Orlando non-storm events. These results showed a correlation conditional to the candidate pond and sampling conditions for microcystin and chlorophyll-a concentrations.

  19. Evaluation of the physicochemical and chlorophyll-a conditions of a subtropical aquaculture in Lake Nasser area, Egypt

    Directory of Open Access Journals (Sweden)

    Ahmed Mohamed El-Otify

    2015-12-01

    Full Text Available Water quality, nutritional characteristics and phytoplankton biomass in aquaculture of Oreochromis niloticus (L. simultaneously with its water source supply (Lake Nasser, were monthly investigated over a one-year period (July 2009–2010. Analysis of the results showed that application of fertilizers and environmental conditions appeared to be the principal factors influencing the spatio-temporal variations of water quality and productivity. The data obtained revealed differences between the fish pond and its water supply. Monthly fluctuations in the availability of the major nutrients reflected the occasional supply of the fish pond with different nutrients. Phytoplankton biomass in terms of chlorophyll-a concentrations were always of relatively higher values in the fish pond than those in Lake Nasser's water. Elevation of pH values and dissolved oxygen saturation levels appeared concomitantly with the increase of chlorophyll-a concentrations due to the phytoplankton photosynthetic assimilation activities. The observations of the present study highlighted the chlorophyll-a concentrations as an indicator of phytoplankton biomass reflecting water quality in the Nile tilapia aquaculture ecosystem.

  20. Primary marine aerosol emissions from the Mediterranean Sea during pre-bloom and oligotrophic conditions: correlations to seawater chlorophyll a from a mesocosm study

    Directory of Open Access Journals (Sweden)

    A. N. Schwier

    2014-10-01

    Full Text Available The effect of ocean acidification and changing water conditions on primary marine aerosol emissions is not well understood on a regional or a global scale. To investigate this effect as well as the indirect effect on aerosol that changing biogeochemical parameters can have, ~52 m3 pelagic mesocosms were deployed for several weeks in the Mediterranean Sea during both winter pre-bloom and summer oligotrophic conditions and were subjected to various levels of CO2 to simulate the conditions foreseen in this region for the coming decades. After seawater sampling, primary bubble-bursting aerosol experiments were performed using a plunging water jet system to test both chemical and physical aerosol parameters. Comparing results obtained during pre-bloom and oligotrophic conditions, we find the same four log-normal modal diameters (18.5, 37.5, 91.5, 260 nm describing the aerosol size distribution during both campaigns, yet pre-bloom conditions significantly increased the number fraction of the second (Aitken mode, with an amplitude correlated to virus-like particles, heterotrophic prokaryotes, TEPs, chlorophyll a and other pigments. Organic fractions determined from κ closure calculations for Dp ~50 nm were much larger during the pre-bloom period (64% than during the oligotrophic period (38%, and the organic fraction increased as the particle size decreased. Combining data from both campaigns together, strong positive correlations were found between the organic fraction of the aerosol and chlorophyll a concentrations, heterotrophic and autotrophic bacteria abundance, and dissolved organic carbon (DOC concentrations. As a consequence of the changes in the organic fraction and the size distributions between pre-bloom and oligotrophic periods, we find that the ratio of cloud condensation nuclei (CCN to condensation nuclei (CN slightly decreased during the pre-bloom period. The enrichment of the seawater samples with microlayer samples did not have any

  1. [Fluorescence used to investigate the sensitivity of spinach chloroplast membrane to low intensity electromagnetic radiation].

    Science.gov (United States)

    Xi, Gang; Yang, Yun-Jing; Lu, Hong

    2009-07-01

    A system for studying biological effect of radio frequency electromagnetic field was developed. The system can form an area where electromagnetic wave with large frequency range is well distributed. The strength of electromagnetic wave was measured easily. Electromagnetic wave in the system did not have effect on environment. The sensitivity of spinach chloroplast membrane to low intensity electromagnetic radiation of 300 MHz under power density of 5 mW x cm(-2) was studied by the spectral analysis method of fluorescence of 8-anilino-1-naphthalene-sulfonic acid (ANS) and the changes in chlorophyll a (Chla) fluorescence parameters of spinach chloroplast membrane. The result showed that the position of spectrum of ANS fluorescence of spinach chloroplast membrane did not change, but the intensity of ANS fluorescence was obviously increased under the action of electromagnetic radiation with power density of 1-5 mW x cm(-2). There was an increase in the intensity of ANS fluorescence with the increase in electromagnetic radiation. The increase of ANS fluorescence of spinach chloroplast membrane showed that low level electromagnetic field induced the decrease in fluidity of chloroplast membrane compared with control experiment. The cause of the change in the fluidity could be related to the polarization of chloroplast membrane under the electromagnetic field. The analysis of Chla fluorescence parameters of spinach chloroplast membrane indicated that low level electromagnetic field of 300 MHz made the fluorescence parameters F0 and F(VI/)F(V) decrease, and F(V)/Fo, Fv/F(m) and deltaF(V)/T increase. It was showed that low level electromagnetic field caused the change of non-active center of photosystem II of spinach chloroplast membrane to active center and the increase in potential active and photochemical efficiency of PSII, and promoted the transmit process of electron in photosynthesis of chloroplast membrane of photosynthesis cell in spinach leaf. The study confirmed

  2. Size-fractionated Chlorophyll a biomass in the northern South China Sea in summer 2014

    Science.gov (United States)

    Liu, Haijiao; Xue, Bing; Feng, Yuanyuan; Zhang, Rui; Chen, Mianrun; Sun, Jun

    2016-07-01

    Spatial distribution of phaeopigment and size-fractionated chlorophyll a (Chl a) concentrations were examined in relation to hydrographic conditions in the northern South China Sea (NSCS) during a survey from 20 August to 12 September, 2014. The total Chl a concentration varied from 0.006 to 1.488 µg/L with a mean value of 0.259±0.247 (mean±standard deviation) µg/L. Chl a concentration was generally higher in shallow water (200 m), with mean values of 0.364±0.311 µg/L and 0.206±0.192 µg/L respectively. Vertically, the maximum total Chl a concentration appeared at depths of 30-50 m and gradually decreased below 100 m. The size-fractionated Chl a concentrations of grid stations and time-series stations (SEATS and J4) were determined, with values of pico- (0.7-2 µm), nano- (2-20 µm) and micro-plankton (20-200 µm) ranging from 0.001-0.287 (0.093±0.071 µg/L), 0.004-1.149 (0.148±0.192 µg/L) and 0.001-0.208 (0.023±0.036 µg/L), respectively. Phaeopigment concentrations were determined at specific depths at ten stations, except for at station A9, and varied from 0.007 to 0.572 (0.127±0.164) µg/L. Nano-and pico-plankton were the major contributors to total phytoplankton biomass, accounting for 50.99%±15.01% and 39.30%±15.41%, respectively, whereas microplankton only accounted for 9.39%±8.66%. The results indicate that the contributions of microplankton to total Chl a biomass were less important than picoplankton or nanoplankton in the surveyed NSCS. Different sized-Chl a had similar spatial patterns, with peak values all observed in subsurface waters (30-50 m). The summer monsoon, Kuroshio waters, Zhujiang (Pearl) River plume, and hydrological conditions are speculated to be the factors controlling the abundance and spatial heterogeneity of Chl a biomass in the NSCS.

  3. Synoptic relationships quantified between surface Chlorophyll-a and diagnostic pigments specific to phytoplankton functional types

    Science.gov (United States)

    Hirata, T.; Hardman-Mountford, N. J.; Brewin, R. J. W.; Aiken, J.; Barlow, R.; Suzuki, K.; Isada, T.; Howell, E.; Hashioka, T.; Noguchi-Aita, M.; Yamanaka, Y.

    2010-09-01

    Error-quantified, synoptic-scale relationships between chlorophyll-a (Chla) and phytoplankton pigment groups at the sea surface are presented. A total of nine pigment groups were considered to represent nine phytoplankton functional types (PFTs) including microplankton, nanoplankton, picoplankton, diatoms, dinoflagellates, green algae, picoeukaryotes, prokaryotes and Prochlorococcus sp. The observed relationships between Chla and pigment groups were well-defined at the global scale to show that Chla can be used as an index of not only phytoplankton abundance but also community structure; large (micro) phytoplankton monotonically increase as Chla increases, whereas the small (pico) phytoplankton community generally decreases. Within these relationships, we also found non-monotonic variations with Chla for certain pico-plankton (pico-eukaryotes, Prokaryotes and Prochlorococcus sp.) and for Green Algae and nano-sized phytoplankton. The relationships were quantified with a least-square fitting approach in order to estimate the PFTs from Chla alone. The estimated uncertainty of the relationships quantified depends on both phytoplankton types and Chla concentration. Maximum uncertainty over all groups (34.7% Chla) was found from diatom at approximately Chla = 1.07 mg m-3. However, the mean uncertainty of the relationships over all groups was 5.8 [% Chla] over the entire Chla range observed (0.02 < Chla < 6.84 mg m-3). The relationships were applied to SeaWiFS satellite Chla data from 1998 to 2009 to show the global climatological fields of the surface distribution of PFTs. Results show that microplankton are present in the mid and high latitudes, constituting ~9.0 [% Chla] of the phytoplankton community at the global surface, in which diatoms explain ~6.0 [% Chla]. Nanoplankton are ubiquious throught much of the global surface oceans except subtropical gyres, acting as a background population, constituting ~44.2 [% Chla]. Picoplankton are mostly limited in subtropical

  4. Synoptic relationships between surface Chlorophyll-a and diagnostic pigments specific to phytoplankton functional types

    Directory of Open Access Journals (Sweden)

    M. Noguchi-Aita

    2011-02-01

    Full Text Available Error-quantified, synoptic-scale relationships between chlorophyll-a (Chl-a and phytoplankton pigment groups at the sea surface are presented. A total of ten pigment groups were considered to represent three Phytoplankton Size Classes (PSCs, micro-, nano- and picoplankton and seven Phytoplankton Functional Types (PFTs, i.e. diatoms, dinoflagellates, green algae, prymnesiophytes (haptophytes, pico-eukaryotes, prokaryotes and Prochlorococcus sp.. The observed relationships between Chl-a and PSCs/PFTs were well-defined at the global scale to show that a community shift of phytoplankton at the basin and global scales is reflected by a change in Chl-a of the total community. Thus, Chl-a of the total community can be used as an index of not only phytoplankton biomass but also of their community structure. Within these relationships, we also found non-monotonic variations with Chl-a for certain pico-sized phytoplankton (pico-eukaryotes, Prokaryotes and Prochlorococcus sp. and nano-sized phytoplankton (Green algae, prymnesiophytes. The relationships were quantified with a least-square fitting approach in order to enable an estimation of the PFTs from Chl-a where PFTs are expressed as a percentage of the total Chl-a. The estimated uncertainty of the relationships depends on both PFT and Chl-a concentration. Maximum uncertainty of 31.8% was found for diatoms at Chl-a = 0.49 mg m−3. However, the mean uncertainty of the relationships over all PFTs was 5.9% over the entire Chl-a range observed in situ (0.02 < Chl-a < 4.26 mg m−3. The relationships were applied to SeaWiFS satellite Chl-a data from 1998 to 2009 to show the global climatological fields of the surface distribution of PFTs. Results show that microplankton are present in the mid and high latitudes, constituting only ~10.9% of the entire phytoplankton community in the mean field for 1998–2009, in which diatoms explain ~7.5%. Nanoplankton are ubiquitous throughout the global surface oceans

  5. [Comparison of chlorophyll a concentration estimation in Taihu Lake using different methods].

    Science.gov (United States)

    Li, Yun-Liang; Zhang, Yun-Lin; Li, Jun-Sheng; Liu, Ming-Liang

    2009-03-15

    Based on the measured remote sensing reflectance and concurrent chlorophyll a (Chl-a) concentration in Taihu Lake from January 7 to 9 and July 29 to August 1, 2006, this study comparatively analyzed the estimation precision of three-band-model, two-band-model, reflectance peak position method and first derivative method, and further discussed the feasibility of the four methods to estimate Chl-a using remote sensing image. The data set of two samplings contained widely variable total suspended matter (12.24-285.20 mg x L(-1), Chl-a (4.83-155.11 microg x L(-1)) and chromophoric dissolved organic matte absorption coefficient at 440 nm (0.27-2.36 m(-1)). The former four methods all got high precisions on Chl-a concentration estimation in Taihu Lake with determination coefficients (r2) of 0.813, 0.838, 0.872 and 0.819, respectively. The root mean square error (RMSE) between measured and estimated Chi-a concentrations using the four models was 13.04, 12.12, 13.41 and 12.13 microg x L(-1), respectively, and the relatively error (RE) was 35.5%, 34.9%, 24.6% and 41.8%, respectively. Although the reflectance peak position method had the highest estimation precision, it was difficult to be applied on remote sensing image due to lacking spectral channel. The three-band-model and two-band-model had higher estimation precisions than the first order differential method and good application foreground in Chl-a retrieval using remote sensing image. The r2, RMSE, RE of [R(-1) (665)- R(-1) (709)] x R(754) in three-band-model and R(709)/R(681) in two-band-model based on simulation MERIS data were 0.788, 13.87 microg x L(-1), 37.3%, and 0.815, 12.96 microg x L(-1), 34.8%, respectively. The results in this study demonstrated MERIS data could be applied to retrieve Chl-a concentration in turbid Case-II waters as Taihu Lake.

  6. Global relationships between phosphorus and chlorophyll-a in oxbow lakes

    Science.gov (United States)

    Belcon, A. U.; Bernhardt, E. S.; Fritz, S. C.; Baker, P. A.

    2011-12-01

    Traditional limnological studies have focused on extant, large and deep bodies of fresh water. For over 70 years a strong positive relationship between sestonic chlorophyll-a (Chl-a) and total phosphorus (TP) has been established in temperate lakes with phosphorus generally viewed as the most limiting factor to productivity (Deevey 1940, Schindler 1977). Over the last few decades however, investigations have expanded to include the examination of shallow lakes, particularly in terms of water quality, nutrient content and regime shifts between stable alternate states. Most of these studies, however, have focused on northern, high latitude regions where the lakes are typically postglacial, isolated and fed by small streams. Relatively little work has been done on oxbow lakes which are floodplain lakes and are semi or permanently connected to the river. Oxbow lakes have been shown to serve several important ecologic and economic functions including nurseries for young fish, feeding grounds for top aquatic predators and increasing the biodiversity of the landscape particularly in tropical regions of the world where high precipitation and large rivers have produced thousands of oxbow lakes. In many developing countries oxbow lakes are an important source of revenue through fishing. This study examined the relationship between nutrients and productivity in oxbow lakes globally through a wide-spread literature synthesis. Four hundred and twenty nine oxbow lakes were represented by 205 data points while 285 data points represented 156 non-floodplain lakes. Despite differences in latitude, lake size and climate we find that oxbow lakes globally have a significantly less steep slope in their TP/Chl relationship than non-floodplain lakes do indicating that the same amount of sestonic phosphorus results in lower productivity. Oxbow lakes (TP/Chl): r = 0.7676, slope = 0.7257, Non-floodplain lakes (TP/Chl): r = 0.8096, slope = 1.1309. We theorize that their connection to the

  7. Effect of Methanol on Photosynthesis and Chlorophyll Fluorescence of Flag Leaves of Winter Wheat

    Institute of Scientific and Technical Information of China (English)

    ZHENG Yue-jin; YANG Yue-qin; LIANG Shan-shan; YI Xian-feng

    2008-01-01

    Photosynthesis and chlorophyll a fluorescence parameters, photochemical efficiency of PS II (Fv/Fm), photochemical quenching of PS II (qP), nonphotochemical quenching of PS II (NPQ), maximum activity of PS II (Fv/Fo) as well as electron transport rate (ETR), and quantum yield of PS II (ΦPS II) were measured on flag leaves of the winter wheat treated by methanol at different concentrations. The results revealed that photosynthesis was greatly improved by methanol, as indicated by higher photosynthetic rates and stomatal conductance. The enhancement effect of methanol on photosynthesis was maintained for 3-4 days. Different methanol concentration treatments also increased intercellular CO2 concentration and transpiration rates. No significant decline was found in Fv/Fm, Fv/Fo, and ΦPS II, which revealed no photoinhibition during methanol application in different methanol concentrations. Methanol showing no apparent inhibitory effects indicated higher potential photosynthetic capacity of flag leaves of winter wheat. However, the increase in photosynthesis was not followed by an increase in the photosynthetic activity (Fv/Fm), and fluorescence parameters did not indicate an improvement in intercellular CO2 concentration and PS II photochemical efficiency compared with the control, thereby encouraging us to propose that lower leaf temperatures caused by applied methanol would reduce both dark respiration and photorespiration (most importantly), thus, increasing net CO2 uptake and photosynthetic rates.

  8. Non-Photochemical Fluorescence Quenching Across Scales: From Chloroplasts to Plants to Communities

    NARCIS (Netherlands)

    Murchie, E.H.; Harbinson, J.

    2014-01-01

    Non-photochemical quenching (NPQ) of chlorophyll fluorescence, as a measure of photoprotective thermal dissipation of excess excitation energy (from singlet state chlorophyll a), is usually studied at the molecular, organelle, and leaf scale over relatively short time periods, where it is most readi

  9. Spatial heterogeneity in active chlorophyll fluorescence and PSII activity of coral tissues

    DEFF Research Database (Denmark)

    Ralph, P.J.; Gademann, R.; Larkum, A.W.D.

    2002-01-01

    Chlorophyll-a fluorescence was measured in six species of coral, using pulse-amplitude-modulated fluorometers employing fibre-optic probes with diameters of 8 mm, 1 mm and 140 µm. The 8-mm probe integrated responses over a large area, giving more weight to coenosarc than polyp tissue for Acropora...

  10. Salinity and temperature effects on the growth and chlorophyll-a content of some planktonic aigae

    Directory of Open Access Journals (Sweden)

    Teresa Cristina Siqueira Sigaud

    1993-01-01

    Full Text Available The effect of salinity (0-40 %o and temperature (11-36ºC, at 5ºC intervals variations on maximum growth rate (div d-1, maximum yield (logio cell number and chlorophyll-α content (pg cell-1 of four planktonic algae was examined under laboratory conditions. Phaeodactylum tricornutum grew over the entire range of experimental salinities, at 11-26 ºC. The highest maximum growth rates ( 1.6 div d-1 occurred between 9-30 %o and 16-26 ºC. Optimum salinity range for maximum yield (7.0 was found at 9-35 %c, under 16 ºC. Tetraselmis gracilis reproduced from 4 to 40 %o at 11-31 ºC, with the highest values of maximum growth rate ( 1.6 div d-1 and maximum yield (6.1 occurring at salinities between 14-40 %o at 11-21 ºC and 11-16 ºC, respectively. Minutocellus polymorphic and Chaetoceros sp grew between 9-40 %o and 11-31 ºC. Their highest maximum growth rates (2.1 and 2.6 div d-1, respectively were found at 31ºC, between 20-35 %o and 20-40 %o, respectively. The highest maximum yields for AT. polymorphic (7.2 were recorded between 16-21 ºC at 20-40 %o and for Chaetoceros sp (6.8, between 25-40 %o at 16-31ºC. Chlorophyll-a content per cell was not conspicuously associated to temperature and salinity for the four species. At low salinity extremes, when cell division was inhibited, an increase in the amount of chlorophyll-a per cell was detected.Estudou-se o efeito de variações de salinidade (0-40 %o e temperatura (11-36ºC, em intervalos de 5ºC sobre a taxa máxima de crescimento (div d-1, o rendimento máximo (logio nº cel ml"¹ e o conteúdo de clorofíla-a (pg cel-1 de quatro espécies de algas planctónicas, sob condições de laboratório. Phaeodactylum tricornutum cresceu em toda a amplitude de salinidade experimental e entre 11-26ºC. As mais altas taxas de crescimento (1.6 div d-1 foram obtidas entre 9-30 %o e 16-26ºC. O ótimo de salinidade para o rendimento máximo (7.0 foi observado entre 9- 35%o, à 16ºC. Tetraselmis gracilis se

  11. Study on the Relationship between Chlorophyll-a and Environmental Impact Factors in Deep Reservoir in Karst Areas——Taking Aha Reservoir for Example

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    [Objective] The aim was to study the relationship between chlorophyll-a and environmental impact factors in deep reservoir in Karst Areas.[Method] Taking Aha Reservoir for example,the changes of chlorophyll-a content and its relationship with environmental impact factors were researched,and the water quality of Aha Reservoir was assessed by means of modified Carlson trophic state index.[Result] Chlorophyll-a content in Aha Reservoir was higher in March,April,May and September and lower from June to August,a...

  12. Theoretical study of chlorophyll a hydrates formation in aqueous organic solvents.

    Science.gov (United States)

    Ben Fredj, Arij; Ruiz-López, Manuel F

    2010-01-14

    A theoretical analysis of chlorophyll a (Chla) hydration processes in aqueous organic solvents has been carried out by means of quantum chemistry calculations. A detailed knowledge of the thermodynamics of these processes is fundamental in order to better understand the organization of chlorophyll molecules in vivo, specifically the structure of chlorophyll pairs in photosystems I and II. In the present work, we assumed a Chla model in which the phytyl chain is replaced by a methyl group. Calculations were performed at the B3LYP/6-31G(d) level corrected for basis set superposition errors and dispersion interaction energy. This computational scheme was previously shown to provide data close to MP2/6-311++(2d,2p) results. Solvents effects were taken into account using either continuum (for nonpolar solvents) or discrete-continuum (for polar coordinating solvents) methods. In the latter case, we first examined the structure of Chla in rigorously dry solutions. Two types of solvents were characterized according to Mg-atom coordination: In type I solvents (acetone, acetonitrile, DMSO), Mg exhibits five-coordination, whereas in type II solvents (THF, pyridine), Mg exhibits six-coordination. Hydration processes are quite dependent on solvent nature. In nonpolar or low-polarity solvents such as cyclohexane or chloroform, hydration is always exothermic and exergonic, despite a large entropy term that strongly opposes hydration. In polar solvents of type II, hydration is quite unfavorable, and essentially no hydrates are expected in these media, except perhaps at very large water concentrations (although, in such a case, the medium cannot be simply described as an organic solvent). In polar solvents of type I, the situation is intermediate, and dihydration is favorable in some cases (acetone, acetonitrile) and unfavorable in others (DMSO). It is interesting to note that first hydration processes in coordinating solvents (of either type I or type II), where a water molecule

  13. Effect of different temperature regimes on the chlorophyll a concentration in four species of Antarctic macroalgae

    Digital Repository Service at National Institute of Oceanography (India)

    Dhargalkar, V.K.

    trays with continuous aeration. The macroalgae were spread at the bottom of the tray to avoid self-shading. Light was provided by 20W cool white fluorescence tubes with 12 : 12 h light and dark cycle and was kept constant at 14 ?E m-2 s -1 through out... on a tropical fringing reef. Am. Nat., 118:520-540. Hoek, C. van den 1982 a. The distribution of benthic marine algae in relation to the temperature regulation of their life histories. Biol. J. Linn. Soc, 18:81-144. Hoek, C. van den 1982 b...

  14. Chlorophyll-a profiles collected by various vessels in the Atlantic Ocean and adjoining seas from 03/02/1961 to 10/21/1992 (NODC Accession 9300147)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Chlorophyll-a profiles were collected in the Atlantic Ocean and adjoining seas from March 2, 1961 to October 21, 1992. The data were collected by multiple...

  15. HPLC Analysis of Chlorophyll a, Chlorophyll b, and Beta-Carotene in Collard Greens: A Project for a Problem-Oriented Laboratory Course.

    Science.gov (United States)

    Silveira, Augustine, Jr.; And Others

    1984-01-01

    High performance liquid chromatography (HPLC) is used to separate and quantitate beta-carotene, chlorophyll a, and chlorophyll b originating from collard greens. Experimental procedures used and typical results obtained are discussed. (JN)

  16. Extracted chlorophyll-a and phaeopigment concentrations and other data from R/V Endeavor from 1995-01-11 to 1995-06-16 (NCEI Accession 9900026)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This accession contains "extracted chlorophyll-a and phaeopigment" concentrations collected for the GLOBEC Georges Bank project by Dr. Dian Gifford, Univ. of Rhode...

  17. Intact anthracene inhibits photosynthesis in algal cells: a fluorescence induction study on Chlamydomonas reinhardtii cw92 strain.

    Science.gov (United States)

    Aksmann, Anna; Tukaj, Zbigniew

    2008-12-01

    Short-term (24h) experiments were performed to examine the effect of anthracene (ANT) on Chlamydomonas reinhardtii cw92 grown in a batch culture system aerated with 2.5% CO(2). At concentrations ranging from 0.7 to 5.6 microM, ANT inhibited the growth of population in a concentration-dependent manner and EC(50) calculated amounted to 1.6 microM. At concentrations from 0.7 to 4.2 microM ANT stimulated respiration and inhibited the intensity of photosynthesis but did not affect chlorophyll content in the cells. ANT influenced chlorophyll a fluorescence parameters, measured by OJIP test (O, J, I and P are the different steps of fluorescence induction curve). ANT diminished the performance index (PI), the yield of primary photochemistry (phi(Po)), the yield of electron transport (phi(Epsilonomicron), the efficiency of moving the electron beyond Qa(-) (Psi(0)) and the fraction of active oxygen evolving complexes (OEC). The fraction of active PS II reaction centres in the treated samples dramatically dropped. The most pronounced changes in ANT-treated cells were observed in the stimulation of energy dissipation parameter (DI(0)/RC). The only OJIP parameter that was not influenced by ANT was energy absorption by photosynthetic antennae (ABS). The results lead to a conclusion that the inhibition of photosynthesis may be a consequence of unspecific ANT-membrane interaction, resulting from hydrophobic character of this hydrocarbon.

  18. The size-fractionated chlorophyll a and primary productivity in the Bering Sea during the summer of 2003

    Institute of Scientific and Technical Information of China (English)

    LIU Zilin; CHEN Jianfang; CHEN Zhongyuan; ZHANG Tao; ZHANG Haisheng

    2005-01-01

    Investigations of chlorophyll a and primary productivity were carried out in the Bering Sea along the BR line and the BS line during the Second Chinese National Arctic Research Expedition in the summer of 2003. The results showed that the surface chlorophyll a concentrations were 0.199~1.170 μg/dm3, and the average value was 0.723 μg/dm3 on the BR line. For the BS line, the surface chlorophyll a concentrations were 0.519~4.644 μg/dm3 (average 1.605 μg/dm3) and 0.568~14.968 μg/dm3 (average 5.311 μg/dm3)during the early and late summer, respectively. The average value in the late summer was much higher than that in the early summer.The high values (more than 4.0 μg/dm3) occurred at stations of the BS line in the southern Bering Strait. The chlorophyll a concentrations in the subsurface layer were higher than those in the surface layer. The results of the size-fractionated chlorophyll a showed that the contribution of the picoplankton to total chlorophyll a was the predominance at the early summer and the contribution of the netplankton was the predominance at the late summer. The carbon potential primary productivities varied between 0.471 and 1.147 mg/(m3·h) on the BR line, with average rates of 0.728 mg/(m3·h). The primary productivities on the BS line were much higher than those of the BR line, ranging from 1.227 mg/(m3·h) at the early summer to 19.046 mg/(m3·h) at the late summer. The results of 1.147 mg/(m3·h) on the BR line, with average rates of 0.728 mg/(m3·h). The primary productivities on the BS line were much higher than those of the BR line, ranging from 1.227 mg/(m3·h) at the early summer to 19.046 mg/(m3·h) at the late summer. The results of the size-fractionated primary productivity showed that the contribution of the nanoplankton to total productivity was the predominance at the early summer and the contribution of the netplankton was predominance at the late summer. The assimilation number of photosynthesis was 0.45~2.80 mg

  19. Spectral properties of a divinyl chlorophyll a harboring mutant of Synechocystis sp. PCC6803.

    Science.gov (United States)

    Islam, Md Rafiqul; Watanabe, Koji; Kashino, Yasuhiro; Satoh, Kazuhiko; Koike, Hiroyuki

    2013-11-01

    A divinyl chlorophyll (DV-Chl) a harboring mutant of Synechocystis sp. PCC 6803, in which chlorophyll species is replaced from monovinyl(normal)-Chl a to DV-Chl a, was characterized. The efficiency of light utilization for photosynthesis was decreased in the mutant. Absorption spectra at 77 K and their fourth derivative analyses revealed that peaks of each chlorophyll forms were blue-shifted by 1-2 nm, suggesting lowered stability of chlorophylls at their binding sites. This was also true both in PSI and PSII complexes. On the other hand, fluorescence emission spectra measured at 77 K were not different between wild type and the mutant. This indicates that the mode of interaction between chlorophyll and its binding pockets responsible for emitting fluorescence at 77 K is not altered in the mutant. P700 difference spectra of thylakoid membranes and PSI complexes showed that the spectrum in Soret region was red-shifted by 7 nm in the mutant. This is a characteristic feature of DV-Chl a. Microenvironments of iron-sulfur center of a terminal electron acceptor of PSI complex, P430, were practically the same as that of wild type.

  20. Variability in the correlation between Asian dust storms and chlorophyll a concentration from the North to Equatorial Pacific.

    Science.gov (United States)

    Tan, Sai-Chun; Yao, Xiaohong; Gao, Hui-Wang; Shi, Guang-Yu; Yue, Xu

    2013-01-01

    A long-term record of Asian dust storms showed seven high-occurrence-frequency centers in China. The intrusion of Asian dust into the downwind seas, including the China seas, the Sea of Japan, the subarctic North Pacific, the North Pacific subtropical gyre, and the western and eastern Equatorial Pacific, has been shown to add nutrients to ocean ecosystems and enhance their biological activities. To explore the relationship between the transported dust from various sources to the six seas and oceanic biological activities with different nutrient conditions, the correlation between monthly chlorophyll a concentration in each sea and monthly dust storm occurrence frequencies reaching the sea during 1997-2007 was examined in this study. No correlations were observed between dust and chlorophyll a concentration in the atmospheric deposition is commonly believed to exert less impact on coastal seas. Significant correlations existed between dust sources and many sea areas, suggesting a link between dust and chlorophyll a concentration in those seas. However, the correlation coefficients were highly variable. In general, the correlation coefficients (0.54-0.63) for the Sea of Japan were highest, except for that between the subarctic Pacific and the Taklimakan Desert, where it was as high as 0.7. For the >50 m China seas and the North Pacific subtropical gyre, the correlation coefficients were in the range 0.32-0.57. The correlation coefficients for the western and eastern Equatorial Pacific were relatively low (dust sources, the transport pathways, the dust deposition, the nutrient conditions of oceans, and the probability of dust storms reaching the seas.

  1. Satellite Monitoring of Chlorophyll-a Concentration in the Water Bodies of the Dnieper and Don River Basins

    Science.gov (United States)

    Moses, W. J.; Berdnikov, S.; Gitelson, A. A.

    2008-12-01

    We present and discuss here the results of our work using satellite data to estimate chlorophyll-a concentration in reservoirs of the Dnieper River and the Sea of Azov, which are typical Case II waters, i.e., turbid and productive. Our objective was two-folded - (i) to test the potential of remote sensing as a tool for near-real-time monitoring of these water bodies, and (ii) to feed the results of our work into a larger project that involved the use of satellite technology to investigate and understand the effects on the bio-optical characteristics of these water bodies due to changes in the land use and land cover in the surrounding regions. MODIS and MERIS images were used. We tested the performance of a three-band model and a two- band model that use the reflectance at the red and NIR spectral bands for the retrieval of chlorophyll-a concentration. The higher spatial resolution and the availability of a spectral band at around 708 nm with the MERIS data offered great promise for the three-band model. We tested the applicability of two standard MODIS and MERIS algorithms for Case II waters. We compared results from several different atmospheric correction procedures available for MODIS and MERIS data. No one particular procedure was consistently and systematically better than the rest. Nevertheless, even in the absence of a perfect atmospheric correction procedure, both the three-band and the two-band models showed promising results when compared to in-situ chlorophyll-a measurements. The challenges and limitations involved in satellite remote monitoring of turbid productive waters are discussed.

  2. Effects of Groundwater Levels on Photosynthetic Pigments and Light Response of Chlorophyll Fluorescence Parameters of Populus euphratica and Populus pruinosa%地下水位对胡杨(Populus euphratica)和灰胡杨(Populus pruinosa)叶绿素荧光光响应与光合色素含量的影响

    Institute of Scientific and Technical Information of China (English)

    王海珍; 陈加利; 韩路; 徐雅丽; 贾文锁

    2013-01-01

    Photosynthetic pigments and light response curves of chlorophyll fluorescence parameters in leaves of Populus euphratica and Poulus pruinosa,living with different groundwater depths (2.5 m,3.5 m and 5.0 m) in the upper reaches of Tarmi River,were measured with a portable fluorometer.The results showed that chlorophyll fluorescence parameters of light response curves of P.euphratica and P.pruinosa,such as photosynthetic electron transport rate(ETR),non-photochemical quenching(NPQ),excitation pressure (1-qP),the ratio of antenna thermal dissipation (D),excess excited energy(E),relative limitation of photosynthesis(PED),the deviation from full balance between PSⅠ and PS Ⅱ (β/α-1) increased with increasing photosynthetic active radiation(PAR),but PS Ⅱ actual photochemical efficiency(ΦPSⅡ),photochemistry quenching (qP) and the ratio of absorbed light in photochemistry(P) decreased with increasing PAR under different groundwater levels in arid desert environment.The decrease of groundwater levels led to decrease in leaf water content,maximum electron transport rate (ETRmax),initial slope rate of photochemical reaction(θ),ETR,ΦSⅡ,qP,P and leaf content of chlorophyll a (Chla),leaf content of chlorophyll b (Chlb),total chlorophyll (Chla + Chlb),carotenoids,but it led to increase obviously in the ratio of Chla to Chlb (Chla/ Chlb),NPQ,D,E,PED,1-qP,β/α-1 under the same light intensity.The decrease of groundwater levels influenced significantly the chlorophyll fluorescence parameters of light response curves of two tree species,and it led to changes in light energy absorption,transfer and allocation,further to decrease the photosynthetic efficiency.Greater decreases occurred with the deeper groundwater level and P.pruinosa declined more than P.euphratica,it showed P.euphratica were better ecological adaptation to desert environment than P.pruinosa.P.euphratica could maintain relative high ETR,ETRmax,θ,ΦPSⅡ,qP,P and enhanced radiationless energy dissipation

  3. Standardization of a protocol to extract and analyze chlorophyll a and carotenoids in Gracilaria tenuistipitata Var. Liui. Zhang and Xia (Rhodophyta

    Directory of Open Access Journals (Sweden)

    Priscila Bezerra Torres

    2014-03-01

    Full Text Available Chlorophyll a and carotenoids are important pigments in photosynthesis. Several studies have been published describing extraction and analysis protocols of these pigments, mainly in vascular plant species. This study standardizes an extraction and analysis protocol of these substances in Gracilaria tenuistipitata var. liui, a red seaweed. Apical portions grown in vitro were triturated in liquid nitrogen. Extracts were prepared in 1.5 mL solvent and centrifuged. Quantitative and qualitative analyses of pigments were performed by UV/visible light spectrophotometry and high performance liquid chromatography (HPLC and HPLC coupled to mass spectrometry (HPLC-MS. The parameters assessed were: minimum biomass, best extraction solvent, and number of extraction steps. Methanol was the most efficient solvent, and 50 mg fresh biomass was the amount of sample indicated, submitted to one single extraction step. No significant differences were observed in levels of these pigments by UV-visible light spectrophotometry and HPLC. However, HPLC or HPLC-MS are required to identify the different carotenoids present in this seaweed species.

  4. Fluorescence spectroscopy

    DEFF Research Database (Denmark)

    Bagatolli, Luis

    2016-01-01

    Fluorescence spectroscopy is a powerful experimental tool used by scientists from many disciplines. During the last decades there have been important developments on distinct fluorescence methods, particularly those related to the study of biological phenomena. This chapter discusses the foundati......Fluorescence spectroscopy is a powerful experimental tool used by scientists from many disciplines. During the last decades there have been important developments on distinct fluorescence methods, particularly those related to the study of biological phenomena. This chapter discusses...

  5. Effects of Low pH on Photosynthesis, Related Physiological Parameters, and Nutrient Profiles of Citrus

    Science.gov (United States)

    Long, An; Zhang, Jiang; Yang, Lin-Tong; Ye, Xin; Lai, Ning-Wei; Tan, Ling-Ling; Lin, Dan; Chen, Li-Song

    2017-01-01

    Seedlings of “Xuegan” (Citrus sinensis) and “Sour pummelo” (Citrus grandis) were irrigated daily with a nutrient solution at a pH of 2.5, 3, 4, 5, or 6 for 9 months. Thereafter, the following responses were investigated: seedling growth; root, stem, and leaf concentrations of nutrient elements; leaf gas exchange, pigment concentration, ribulose-1,5-bisphosphate carboxylase/oxygenase activity and chlorophyll a fluorescence; relative water content, total soluble protein level, H2O2 production and electrolyte leakage in roots and leaves. This was done (a) to determine how low pH affects photosynthesis, related physiological parameters, and mineral nutrient profiles; and (b) to understand the mechanisms by which low pH may cause a decrease in leaf CO2 assimilation. The pH 2.5 greatly inhibited seedling growth, and many physiological parameters were altered only at pH 2.5; pH 3 slightly inhibited seedling growth; pH 4 had almost no influence on seedling growth; and seedling growth and many physiological parameters reached their maximum at pH 5. No seedlings died at any given pH. These results demonstrate that citrus survival is insensitive to low pH. H+-toxicity may directly damage citrus roots, thus affecting the uptake of mineral nutrients and water. H+-toxicity and a decreased uptake of nutrients (i.e., nitrogen, phosphorus, potassium, calcium, and magnesium) and water were likely responsible for the low pH-induced inhibition of growth. Leaf CO2 assimilation was inhibited only at pH 2.5. The combinations of an impaired photosynthetic electron transport chain, increased production of reactive oxygen species, and decreased uptake of nutrients and water might account for the pH 2.5-induced decrease in CO2 assimilation. Mottled bleached leaves only occurred in the pH 2.5-treated C. grandis seedlings. Furthermore, the pH 2.5-induced alterations of leaf CO2 assimilation, water-use efficiency, chlorophylls, polyphasic chlorophyll a fluorescence (OJIP) transients and

  6. Effect of iron fertilizer siphon transfusion on photosynthetic physiological indices and chlorophyll fluorescence parameters of iron deficiency chlorosis in apple trees%铁肥虹吸输液对缺铁失绿苹果叶片光合生理指标和荧光参数的影响

    Institute of Scientific and Technical Information of China (English)

    赵志军; 刘子英; 高一宁; 崔美香; 刘贵巧; 薛进军

    2013-01-01

    为了进一步探索矫正苹果缺铁失绿症途径,采用铁肥虹吸输液方法,研究了铁肥虹吸输液对缺铁黄化叶片复绿,叶片解剖结构、色素含量、光合生理指标和叶绿素荧光参数的影响.结果表明,虹吸输液处理的复绿苹果叶片单个细胞叶绿体数目比对照增加了3.6个,淀粉粒有所减少;叶绿体内基粒结构更清晰、垛叠增多;线粒体内嵴数量增多、清晰度提高;叶绿体和线粒体的被膜结构得到修复.虹吸输铁后失绿程度由2.00级恢复到0.49级;铁肥虹吸输液显著提高了叶片的光合速率、气孔导度,降低了细胞间隙的CO2浓度.输铁处理其PSⅡ原初光能转化效率(Fv/Fm)和PSⅡ潜在活性(Fv/Fo)均为最高.缺铁失绿苹果叶片叶绿素a、叶绿素b含量分别比未输液对照增加2.97倍和3.18倍.说明采取铁肥虹吸输液的方法能够矫正苹果缺铁失绿症.%The objective of this study was to explore a new approach of correcting iron deficiency chlorosis in apple trees.The regreen of yellow leaves,anatomical structure of leaves,pigment content,photosynthetic physiological indicators and chlorophyll fluorescence parameters were researched by means of iron fertilizer siphon transfusion.The results show that the number of chloroplast of retrieved green leaves is increased by 3.6 under the siphon transfusion treatment,while the starch grains are reduced.The chloroplast grana structure is clearer under the siphon transfusion treatment,and the stacked chloroplast lamellae is increased.The number of the cristae in mitochondrion is increased and the structure is clearer under the siphon transfusion treatment.The biofilm structures of chloroplast and mitochondrion are repaired under the siphon transfusion treatment.The scale of the chlorosis is resumed from 2.00 to 0.49 after the siphon transfusion.The photosynthetic rate and stomatal conductance are significantly improved by the iron fertilizer siphoning infusion

  7. The molecular second hyperpolarizability of the light-harvesting chlorophyll a/b pigment-protein complex of photosystem II.

    Science.gov (United States)

    Tokarz, Danielle; Cisek, Richard; Fekl, Ulrich; Barzda, Virginijus

    2013-09-26

    Photosynthetic structures when imaged with nonlinear optical microscopy give rise to high third harmonic generation (THG) signal intensity due to the presence of chlorophylls and xanthophylls which have large second hyperpolarizabilitiy (γ) values. The γ value of trimers of the light-harvesting chlorophyll a/b pigment-protein complex of photosystem II (LHCII) isolated from pea (Pisum sativum) plants was investigated by the THG ratio technique at 1028 nm wavelength and found to have the value (-1600 ± 400) × 10(-41) m(2) V(-2). The large negative γ value of trimeric LHCII is due to the presence of chlorophyll a and chlorophyll b which have large negative γ values, while positive γ values of xanthophylls reduce the magnitude of the THG signal. Variation was observed between the measured γ value of LHCII and the approximated γ value of LHCII obtained by adding individual γ values of chlorophylls and xanthophylls. This difference can be attributed to the differing inter-pigment interactions of oriented chlorophylls and xanthophylls in the pigment-protein complex compared to randomly oriented non-interacting pigments in solution, as well as a differing dielectric environment of the pigments within LHCII versus the surrounding organic solvent.

  8. Development of empirical potential functions for the study of molecular geometry, and applications to chlorophyll a dimers. [Dissertation

    Energy Technology Data Exchange (ETDEWEB)

    Oie, Tetsuro

    1980-01-01

    A purpose of the present studies is twofold: (1) development of an empirical potential function (EPF) and (2) application of it to the studies of photoreaction center chlorophyll a dimer. The reliable estimate of geometric structures and energies of large molecules by quantum mechanical methods is not possible at the present time. An alternative method is, therefore, needed for the studies of large molecular systems, and Chapter I is dedicated to the development of this tool, i.e., an empirical potential function, which could suffice this purpose. Because of a large number of variable chemical compositions and functional groups characteristically present in a large molecule, it is important to include a large number of structurally diverse molecules in the development of the EPF. In Chapter II, the EPF is applied to study the geometrical structure of a chlorophyll a (Chl a) dimer, which is believed to exist at the photoreaction center of green plants and is known to play an essential role in photosynthetic energy conversion. Although various models have been proposed for this dimer structure, there is still a great need for information concerning the detailed geometric structure of this dimer. Therefore, in this chapter the structural stabilities of various dimer models are examined by the EPF, and detailed and quantitative information on the structure and stability of these models is provided.

  9. Development of empirical potential functions for the study of molecular geometry, and applications to chlorophyll a dimers

    Energy Technology Data Exchange (ETDEWEB)

    Oie, Tetsuro

    1980-07-28

    A purpose of the present studies is twofold: (1) development of an empirical potential function (EDF) and (2) application of it to the studies of photoreaction center chlorophyll a dimer. The reliable estimate of geometric structures and energies of large molecules by quantum mechanical methods is not possible at the present time. An alternative method is, therefore, needed for the studies of large molecular systems, and Chapter I is dedicated to the development of this tool, i.e., an empirical potential function, which could suffice this purpose. Because of a large number of variable chemical compositions and functional groups characteristically present in a large molecule, it is important to include a large number of structurally diverse molecules in the development of the EPF. In Chapter II, the EPF is applied to study the geometrical structure of a chlorophyll a (Ch1 a) dimer, which is believed to exist at the photoreaction center of green plants and is known to play an essential role in photosynthetic energy conversion. Although various models have been proposed for this dimer structure, there is still a great need for information concerning the detailed geometric structure of this dimer. Therefore, in this chapter the structural stabilities of various dimer models are examined by the EPF, and detailed and quantitative information on the structure and stability of these models is provided.

  10. Southeast Alaskan shelf from southern tip of Baranof Island to Kayak Island: Currents, mixing and chlorophyll-a

    Science.gov (United States)

    Stabeno, P. J.; Bond, N. A.; Kachel, N. B.; Ladd, C.; Mordy, C. W.; Strom, S. L.

    2016-10-01

    During 2011 and 2013, an integrated ecosystem study was undertaken on the Southeast Alaska shelf and slope. As part of that study, a total of 8 moorings were deployed each year along the coast of Baranof and Chichagof Islands, in Cross Sound and at Icy Point. In addition, 18 satellite-tracked drifters were deployed during the two field years. The goals of this manuscript are to describe: the coastal currents in southeastern Alaska; the processes affecting them; and how the physics modify the nutrients and primary production in the region. Mixing in Cross Sound is an important source of nutrients for the shelf north of the sound, resulting in prolonged production during summer. While the Alaska Coastal Current is not a continuous feature along the entire Gulf of Alaska coast, it does exist from southern tip of Baranof Island to Cross Sound, and again northwest of Yakutat. The narrowness of this shelf coupled with the meanders and eddies in the Alaska Current result in large amounts of on-shelf flow of slope water and off-shelf flow of coastal water. While local currents and summer winds were similar in 2011 and 2013, 2011 was characterized by low chlorophyll-a concentrations throughout the spring-summer, while chlorophyll concentrations in 2013 were typical. The cause of this difference remains unclear, but bottom-up processes likely contributed to the low chlorophyll-a concentrations in 2011.

  11. Modeling the seasonal and interannual variability (2001-2010) of chlorophyll-a in the Iberian margin

    Science.gov (United States)

    Reboreda, Rosa; Cordeiro, Nuno G. F.; Nolasco, Rita; Castro, Carmen G.; Álvarez-Salgado, Xosé A.; Queiroga, Henrique; Dubert, Jesus

    2014-10-01

    A modeling study of the seasonal and interannual variability of chlorophyll-a has been carried out for the period 2001-2010 along the Iberian shelf and adjacent ocean. A high resolution regional configuration of the three-dimensional Regional Ocean Modeling System (ROMS) has been used, coupled to a N2PZD2-type biogeochemical model. Chlorophyll-a concentration ([Chl]) model outputs were compared to regional objective analysis of remotely sensed [Chl] data for the same period. The spatio-temporal variability of modeled and satellite derived [Chl] was analyzed applying an individual Empirical Orthogonal Function (EOF) analysis to monthly time series. Three main modes of sea surface [Chl] variability explained more than 90% of modeled variability and more than 85% of remotely sensed variability. The first EOF accounted for the spring phytoplankton bloom (March-April). The second EOF was related to the spring-summer coastal upwelling season (April-September). The third EOF showed a recurrent [Chl] minimum in winter coinciding with the maximum vertical mixing (February) for the northern part of the region. The influence of the hydrographic conditions on [Chl] variability was explored through a cross-correlation analysis of the three EOFs and an assortment of physical descriptors given by the model: namely the mixing/stratification cycles and the occurrence of coastal upwelling.

  12. Comparison of Chlorophyll-A Algorithms for the Transition Zone Between the North Sea and Baltic Sea

    Science.gov (United States)

    Huber, Silvia; Hansen, Lars B.; Rasmussen, Mads O.; Kaas, Hanne

    2015-12-01

    Monitoring water quality of the transition zone between the North Sea and Baltic Sea from space is still a challenge because of the optically complex waters. The presence of suspended sediments and dissolved substances often interfere with the phytoplankton signal and thus confound conventional case-1 algorithms developed for the open ocean. Specific calibration to case-2 waters may compensate for this. In this study we compared chlorophyll-a (chl-a) concentrations derived with three different case-2 algorithms: C2R, FUB/WeW and CoastColour using MERIS data as basis. Default C2R and FUB clearly underestimate higher chl-a concentrations. However, with local tuning we could significantly improve the fit with in-situ data. For instance, the root mean square error is reduced by roughly 50% from 3.06 to 1.6 μ g/L for the calibrated C2R processor as compared to the default C2R. This study is part of the FP7 project AQUA-USERS which has the overall goal to provide the aquaculture industry with timely information based on satellite data and optical in-situ measurements. One of the products is chlorophyll-a concentration.

  13. Influence of different water-ethanol solvent systems on the spectroscopic and physico-chemical properties of the macrocyclic compounds pheophytin and chlorophyll a; Influencia de diferentes sistemas de solvente agua-etanol sobre as propriedades fisico-quimicas e espectroscopicas dos compostos macrociclicos feofitina e clorofila a

    Energy Technology Data Exchange (ETDEWEB)

    Moreira, Leonardo M.; Rodrigues, Maira R.; Oliveira, Hueder P. M. de [Universidade Camilo Castelo Branco, Sao Jose dos Campos, SP (Brazil); Lima, Adriana [Universidade do Vale do Paraiba, Sao Jose dos Campos, SP (Brazil); Soares, Rafael R. S.; Batistela, Vagner R.; Gerola, Adriana P.; Hioka, Noboru [Universidade Estadual de Maringa (UEM), PR (Brazil). Dept. de Quimica; Severino, Divinomar; Baptista, Mauricio S. [Universidade de Sao Paulo, (USP), SP (Brazil). Inst. de Quimica; Machado, Antonio Eduardo da Hora [Universidade Federal de Uberlandia (UFU), MG (Brazil). Inst. de Quimica

    2010-07-01

    This work focus on the influence of solvent on the photophysical properties of chlorophyll a and pheophytin. Both compounds are related to the photosynthesis process and are considered prototypes of photosensitizers in Photodynamic Therapy. Fluorescence measurements were developed using water/ethanol mixtures at different compositions, since both solvents could be employed in biological applications. The spectroscopic properties of these compounds undergo profound changes depending on water content in the ethanol due to auto-aggregation processes. The major hydrophobicity and the lower dielectric constant of ethanol when compared with water precluded significantly the auto-aggregation process of these compounds. (author)

  14. Effects of temperature and irradiance on a benthic microalgal community: A combined two-dimensional oxygen and fluorescence imaging approach

    DEFF Research Database (Denmark)

    Hancke, Kasper; Sorrell, Brian Keith; Lund-Hansen, Lars Chresten

    2014-01-01

    The effects of temperature and light on both oxygen (O2) production and gross photosynthesis were resolved in a benthic microalgae community by combining two-dimensional (2D) imaging of O2 and variable chlorophyll a (Chl a) fluorescence. Images revealed a photosynthetically active community...

  15. 用荧光参数表征牛血清白蛋白在脲中的变化过程%Characterize the denaturation process of bovine serum albumin in urea by fluorescence parameters

    Institute of Scientific and Technical Information of China (English)

    张家兴; 晋可; 尹宗宁

    2012-01-01

    OBJECTIVE To analyze the fluorescence parameters elucidate the phenomenon on molecular level and establish the relationship between the conformation of protein and the environment. METHODS Intrinsic tryptophan fluorescence, fluorescence quenching and fluorescence probes spectrophotometry were selected to study the denaturation process of bovine serum albumin(BSA) in urea. RESULTS An attenuation of intensity was observed both in BSA and 1,8- ANS - BSA conjugates with increasing the concentration of urea. A red shift on fluorescence emission peak occurred on the 1,8 - ANS - BSA conjugates, while the same result appeared on BSA only after a blue shift, CONCLUSION It was shown that the denaturation process of BSA in urea was consistent with a three - state model, and the conformational changes of the binding site on BSA of ANS were much more sensitive than that of trypto-phane residue.%目的 研究牛血清白蛋白在脲中的构象变化过程,根据荧光参数的变化,建立蛋白构象与环境变化的关系,从分子水平探讨蛋白质构象变化而致不稳定的原因.方法 采用内源性荧光法、荧光淬灭法及荧光探针法研究牛血清白蛋白在脲中的构象变化过程.结果 随着脲浓度的增加,牛血清白蛋白中内源性色氨酸荧光峰位先蓝移后红移,荧光强度逐步衰减;而8 -苯胺基-1-萘磺酸与牛血清白蛋白结合物的荧光峰位则逐步红移,荧光强度逐渐衰减.结论 在变性过程中,牛血清白蛋白的色氨酸残基所处区域构象经历了一个先紧缩后舒展的三态过程;而8 -苯胺基-1-萘磺酸的探针结合位点与色氨酸残基可能位于牛血清白蛋白的不同区域,且构象变化更为灵敏.

  16. Chlorophyll revisited: anti-inflammatory activities of chlorophyll a and inhibition of expression of TNF-α gene by the same.

    Science.gov (United States)

    Subramoniam, Appian; Asha, Velikkakathu V; Nair, Sadasivan Ajikumaran; Sasidharan, Sreejith P; Sureshkumar, Parameswaran K; Rajendran, Krishnan Nair; Karunagaran, Devarajan; Ramalingam, Krishnan

    2012-06-01

    In view of the folklore use of green leaves to treat inflammation, the anti-inflammatory property of chlorophylls and their degradation products were studied. Chlorophyll a and pheophytin a (magnesium-free chlorophyll a) from fresh leaves showed potent anti-inflammatory activity against carrageenan-induced paw edema in mice and formalin-induced paw edema in rats. Chlorophyll a inhibited bacterial lipopolysaccharide-induced TNF-α (a pro-inflammatory cytokine) gene expression in HEK293 cells, but it did not influence the expression of inducible nitric acid synthase and cyclooxygenase-2 genes. Chlorophyll b only marginally inhibited both inflammation and TNF-α gene expression. But both chlorophyll a and chlorophyll b showed the same level of marginal inhibition on 12-O-tetradecanoyl-phorbol-13-acetate-induced NF-κB activation. Chlorophylls and pheophytins showed in vitro anti-oxidant activity. The study shows that chlorophyll a and its degradation products are valuable and abundantly available anti-inflammatory agents and promising for the development of phytomedicine or conventional medicine to treat inflammation and related diseases.

  17. Primary productivity and chlorophyll a in Prydz Bay and its mouth in Antarctica during the austral summer of 1999/2000

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    The investigation of phytoplankton standing stock, euphotic layer and photosynthesis rate were carried out in 19 - 27 of January, 2000 at three longitudinal sections (70°30'E, 73°00'E and 75°30'E). The results showed that the high value of chlorophyll a concentration was in inshore bay, polynya and the continental slope of the investigated sea area. At various investigated stations, average chlorophyll a concentration at sub-surface layer (25 m) was higher than that at surface layer; its concentration at the deeper layers of over 50 m decreased with increasing depth. At anchor station, the maximum chlorophyll az concentration appeared at surface layer in Antarctic summer's afternoon while the minimum value appeared in the morning; chlorophyll a concentration at water layer of 0 - 25 m was obviously higher than that at deep water layer, being related to the releasing of ice-algae. High productivity was in inshore bay and polynya of continental shelf. Chlorophyll a concentration at surface layer is closely correlated to the dissolved oxygen concentration in seawater. The sea ares with chlorophyll a concentration of over 1.0ag/dms may be the convergence of CO2 and that of below 1.0 μg/dms may be the source of CO2.

  18. Effects of Dihydroartemisinin and Artemether on the Growth, Chlorophyll Fluorescence, and Extracellular Alkaline Phosphatase Activity of the Cyanobacterium Microcystis aeruginosa

    Science.gov (United States)

    Wang, Shoubing; Xu, Ziran

    2016-01-01

    Increased eutrophication in the recent years has resulted in considerable research focus on identification of methods for preventing cyanobacterial blooms that are rapid and efficient. The objectives of this study were to investigate the effects of dihydroartemisinin and artemether on the growth of Microcystis aeruginosa and to elucidate its mode of action. Variations in cell density, chlorophyll a, soluble protein, malondialdehyde, extracellular alkaline phosphatase activity (APA), and chlorophyll fluorescence parameters (Fv/Fm, ΦPSII, ETR, rapid light curves, fast chlorophyll fluorescence curves on fluorescence intensity, and relative variable fluorescence) were evaluated by lab-cultured experiments. Our results demonstrated that both dihydroartemisinin and artemether inhibited the growth of M.aeruginosa by impairing the photosynthetic center in photosystem II and reducing extracellular APA, with a higher sensitivity exhibited toward artemether. The inhibitory effects of dihydroartemisinin on M.aeruginosa increased with concentration, and the maximum growth inhibitory rate was 42.17% at 24 mg·L-1 after 120h exposure, whereas it was 55.72% at 6 mg·L-1 artemetherafter 120h exposure. Moreover, the chlorophyll fluorescence was significantly inhibited (p<0.05) after 120h exposure to 12 and 24 mg·L-1 dihydroartemisinin. Furthermore, after 120h exposure to 6 mg·L-1 artemether, Fv/Fm, ΦPSII, ETR and rETRmax showed a significant decrease (p<0.01) from initial values of 0.490, 0.516, 17.333, and 104.800, respectively, to 0. One-way analysis of variance showed that 6 mg·L-1 artemether and 24 mg·L-1 dihydroartemisinin had significant inhibitory effects on extracellular APA (p<0.01). The results of this study would be useful to further studies to validate the feasibility of dihydroartemisinin and artemether treatment to inhibit overall cyanobacterial growth in water bodies, before this can be put into practice. PMID:27755566

  19. Differential control of xanthophylls and light-induced stress proteins, as opposed to light-harvesting chlorophyll a/b proteins, during photosynthetic acclimation of barley leaves to light irradiance

    Science.gov (United States)

    Montane; Tardy; Kloppstech; Havaux

    1998-09-01

    Barley (Hordeum vulgare L.) plants were grown at different photon flux densities ranging from 100 to 1800 &mgr;mol m-2 s-1 in air and/or in atmospheres with reduced levels of O2 and CO2. Low O2 and CO2 partial pressures allowed plants to grow under high photosystem II (PSII) excitation pressure, estimated in vivo by chlorophyll fluorescence measurements, at moderate photon flux densities. The xanthophyll-cycle pigments, the early light-inducible proteins, and their mRNA accumulated with increasing PSII excitation pressure irrespective of the way high excitation pressure was obtained (high-light irradiance or decreased CO2 and O2 availability). These findings indicate that the reduction state of electron transport chain components could be involved in light sensing for the regulation of nuclear-encoded chloroplast gene expression. In contrast, no correlation was found between the reduction state of PSII and various indicators of the PSII light-harvesting system, such as the chlorophyll a-to-b ratio, the abundance of the major pigment-protein complex of PSII (LHCII), the mRNA level of LHCII, the light-saturation curve of O2 evolution, and the induced chlorophyll-fluorescence rise. We conclude that the chlorophyll antenna size of PSII is not governed by the redox state of PSII in higher plants and, consequently, regulation of early light-inducible protein synthesis is different from that of LHCII.

  20. Parameterization of the chlorophyll a-specific in vivo light absorption coefficient covering estuarine, coastal and oceanic waters

    DEFF Research Database (Denmark)

    Stæhr, P. A.; Markager, S.

    2004-01-01

    We evaluated models predicting the spectral chlorophyll-a (Chl a)-specific absorption coefficient (a*ph (¿)) from Chl a concentration [Chl a] on the basis of 465 phytoplankton absorption spectra collected in estuarine, coastal and oceanic waters. A power model on ln-transformed data provided.......015 m2 mg-1 Chl a) at 440 nm, the peak absorption of Chl a in the blue part of the spectrum. The variations in the modelled a*ph spectra were within realistic predictions of a*ph (¿) and the model satisfactorily reproduced the spectral flattening with increasing [Chl a]. The parameterization of a...... realistic reconstructions of a*ph (¿) from simple measurements of [Chl a] sampled in estuarine, coastal and oceanic waters....

  1. Salt-induced redox-independent phosphorylation of light harvesting chlorophyll a/b proteins in Dunaliella salina thylakoid membranes.

    Science.gov (United States)

    Liu, Xian-De; Shen, Yun-Gang

    2005-02-17

    This study investigated the regulation of the major light harvesting chlorophyll a/b protein (LHCII) phosphorylation in Dunaliella salina thylakoid membranes. We found that both light and NaCl could induce LHCII phosphorylation in D. salina thylakoid membranes. Treatments with oxidants (ferredoxin and NADP) or photosynthetic electron flow inhibitors (DCMU, DBMIB, and stigmatellin) inhibited LHCII phosphorylation induced by light but not that induced by NaCl. Furthermore, neither addition of CuCl(2), an inhibitor of cytochrome b(6)f complex reduction, nor oxidizing treatment with ferricyanide inhibited light- or NaCl-induced LHCII phosphorylation, and both salts even induced LHCII phosphorylation in dark-adapted D. salina thylakoid membranes as other salts did. Together, these results indicate that the redox state of the cytochrome b(6)f complex is likely involved in light- but not salt-induced LHCII phosphorylation in D. salina thylakoid membranes.

  2. Chlorophyll a in suspended particulate matter of the Caspian Sea as an indicator of biogenic sedimentation conditions

    Science.gov (United States)

    Kravchishina, M. D.; Klyuvitkin, A. A.; Pautova, L. A.; Politova, N. V.; Lein, A. Yu.; Lisitzin, A. P.

    2015-11-01

    The conditions of biogenic sedimentation (concentration of chlorophyll a (chl a), particulate organic carbon (POC), and its isotope composition (δ13CPOC)), as well as the quantitative characteristics of phytoplankton, and the total concentration of suspended particulate matter have been studied in the Caspian Sea in May and June 2012. The vertical (from the surface layer to bottom) distribution and precipitation of the biogenic component of suspended particulate matter have been determined. It was found that only 5% of the particulate matter and around 3% of POC reached the Middle Caspian after passing through a marginal filter (Volga River delta-Northern Caspian). The subsurface chl a maximum layer (around 20-60 m) with a cold-water phytoplankton community was revealed in the Middle and Southern Caspian. The subsurface region of accumulation of chl a and phytoplankton in the subthermocline layer has been extended from the southern periphery of the Derbent Depression to the Absheron Sill.

  3. Evaluation of chlorophyll-a retrieval algorithms based on MERIS bands for optically varying eutrophic inland lakes.

    Science.gov (United States)

    Lyu, Heng; Li, Xiaojun; Wang, Yannan; Jin, Qi; Cao, Kai; Wang, Qiao; Li, Yunmei

    2015-10-15

    Fourteen field campaigns were conducted in five inland lakes during different seasons between 2006 and 2013, and a total of 398 water samples with varying optical characteristics were collected. The characteristics were analyzed based on remote sensing reflectance, and an automatic cluster two-step method was applied for water classification. The inland waters could be clustered into three types, which we labeled water types I, II and III. From water types I to III, the effect of the phytoplankton on the optical characteristics gradually decreased. Four chlorophyll-a retrieval algorithms for Case II water, a two-band, three-band, four-band and SCI (Synthetic Chlorophyll Index) algorithm were evaluated for three water types based on the MERIS bands. Different MERIS bands were used for the three water types in each of the four algorithms. The four algorithms had different levels of retrieval accuracy for each water type, and no single algorithm could be successfully applied to all water types. For water types I and III, the three-band algorithm performed the best, while the four-band algorithm had the highest retrieval accuracy for water type II. However, the three-band algorithm is preferable to the two-band algorithm for turbid eutrophic inland waters. The SCI algorithm is recommended for highly turbid water with a higher concentration of total suspended solids. Our research indicates that the chlorophyll-a concentration retrieval by remote sensing for optically contrasted inland water requires a specific algorithm that is based on the optical characteristics of inland water bodies to obtain higher estimation accuracy.

  4. The distribution feature of size-fractionated chlorophyll a and primary productivity in Prydz Bay and its north sea area during the austral summer

    Institute of Scientific and Technical Information of China (English)

    刘子琳; 陈忠元

    2003-01-01

    The investigation of size-fractionated chlorophyll a and primary productivity were carried out in three longitudinal sections (63°-69°12′S, 70°30′E, 73°E and 75(30′E) at December 18 -26, 1998 and January 12 -18, 1999 in Prydz Bay and its north sea area, Antarctica. The results showed that surface chlorophyll a concentration were 0.16 - 3.99 μg dm -3. The high values of chlorophyll a concentration ( more than 3.5 μg dm -3 ) were in Prydz Bay and in the west Ladies Bank. The average chlorophyll a concentration at sub-surface layer was higher than that at surface layer; its concentration at the deeper layers of 50 m decreased with increasing depth and that at 200 m depth was only 0.01 -0.95 μg dm-3. The results of size-fractionated chlorophyll a showed that the contribution of the netplanktion to total chlorophyll a was 56% , those of the nanoplankton and the picoplankton were 24% and 20% respectively in the surveyed area. The potential primary productivity at the euphotic zone in the surveyed area was 0. 11 - 11.67 mgC m-3 h -1 and average value was 2.00 ±2.80 mgC m-3h-1. The in-situ productivity in the bay and the continental shelf was higher and that in the deep-sea area was lower. The assimilation number of ted primary productivity show that the contribution of the netplanktion to total productivity was 58% , those of the nanoplankton and the picoplankton were 26% and 16% respectively. The cell abundance of phytoplankton was 1. 6 + 103 - 164. 8 + 103 cell dm-3 in the surface water.

  5. 樟树幼苗机械损伤叶片对挥发性有机化合物及叶绿素荧光参数的影响%Effects of mechanical damage of leaves on volatile organic compounds and chlorophyll fluorescence parameters in seedlings of Cinnamomum camphora

    Institute of Scientific and Technical Information of China (English)

    周帅; 林富平; 王玉魁; 沈应柏; 张汝民; 高荣孚; 高岩

    2012-01-01

    Aims Our objective was to reveal the mechanism of the effects of mechanical damage of leaves on emission of C6-C10 aldehydes and the variation of PSII in Cinnamomum camphora leaves. Methods We analyzed the composition and content of the C6-C10 aldehydes in seedlings of damaged C. camphora by the dynamic headspace air-circulation method and thermal desorption system/gas chromatography/mass spectrum (TDS-GC-MS) measured the activity of lipoxygenases (LOX) in leaves after mechanical damage and investigated the effects of mechanical damage of leaves on chlorophyll a fluorescence parameters. Important findings Results showed that the emissions of hexanal heptanal octanal nonanal and decanal were increased by 2.47 0.99 1.34 0.91 and 28.38 (p < 0.01) times respectively and four kinds of C6-C10 aldehydes were induced: (E)-2-hexenal (E E)-2,47hexadienal (E)-2-octenal and (E)-2-nonenal. The activity of LOX was increased by 1.2 times. The absorption flux per PSII reaction center and trapping flux were significantly decreased by 12.8% (p < 0.05) and 11.1% (p < 0.01) respectively. The density of the active reaction centers per cross section quantum yield of electron transport electron transport chain further than primary quinone acceptor of PSII (QA~) and the performance of PSII activity were increased by 23.3% 24.4% 22.6% and 82.7% (p < 0.01) respectively. The species and emissions of C6-C10 aldehydes activity of LOX and chlorophyll fluorescence parameters nearly recovered after 24 h. This suggested that the damage caused by mechanically damaged stress is more prominent at the donor side of PSII. The activity of LOX was increased and as a result the emission of C6-C10 aldehydes increased. In response to high salt stress C. camphora seedlings improve the quantity of the active reaction centers.%为探讨植物在机械损伤后C6-C10醛类化合物的释放机理,及C6-C10醛类化合物对叶片光系统Ⅱ (PSⅡ)的影响,以樟树(Cinnamomum camphora)为材料,采用动态

  6. Photosynthetic Characteristics and Chlorophyll Fluorescence Kinetic Parame-ters Analyses of Chlorophyll-Reduced Mutant in Brassica napus L.%甘蓝型油菜黄化突变体的光合特性及叶绿素荧光参数分析

    Institute of Scientific and Technical Information of China (English)

    肖华贵; 杨焕文; 饶勇; 杨斌; 朱英

    2013-01-01

      调查油菜自发黄化突变体(NY)、野生型(NG)及其正反交后代材料(F1和rF1)的光合色素含量、光合特性、叶绿素荧光参数及农艺性状,分析五叶期各参数的变化规律.结果表明,突变体叶绿素 a、叶绿素 b、类胡萝卜素和总叶绿素均大幅减少,其中叶绿素 b 减幅最大;净光合速率显著降低,胞间 CO2浓度升高,但气孔导度与野生型相当,表明光合速率不受气孔限制;光补偿点和光饱和点升高,暗呼吸速率与野生型等相当,表观量子效率和光补偿点处量子效率显著降低;CO2补偿点、光呼吸速率和羧化效率均显著降低, CO2饱和点则显著升高;突变体的荧光参数,包括Fo、Fm、Fv/Fm、Fv'/Fm'、ΦPSII、qp、NPQ和ETR均显著降低,说明光合色素含量降低导致 PSII反应中心捕光能力弱和光化学转化效率低,使叶片光合速率降低.突变体的黄化持续时间较长,对生长发育产生影响较大,单株籽粒产量只有野生型的57.09%,但与正常材料组配F1的光合特性和农艺性状均能恢复到正常水平.%We investigated the photosynthetic pigment contents, photosynthetic characteristics, chlorophyll fluorescence kinetic parameters and agronomic traits at five-leaf stage of the chlorophyll-reduced mutant (NY), wild-type (NG), F1, and rF1 of their combinations (reciprocal cross). The results showed that the chlorophyll a, chlorophyll b, total chlorophyll, and carotenoids in the mutant were significantly reduced compared with those in other materials, especially for chlorophyll b. The net photosynthetic rate (Pn) of the mutant was significantly lower than those of wild-type and their F1 and rF1. Relatively high intercellular CO2 con-centration (Ci) and an equivalent stomatal conductance (Gs) in the mutant indicated that stomatal factor was not the limiting factor of the photosynthetic rate. The mutant had higher light compensation point (LCP) and

  7. 双酚A对番茄和生菜幼苗叶绿素荧光参数的影响%Effects of Bisphenol A on Chlorophyll Fluorescence Parameters in Tomato and Lettuce

    Institute of Scientific and Technical Information of China (English)

    李曼; 王丽红; 周青

    2014-01-01

    0, but increased the Fv/Fm,ΦPSⅡ, ETR, qP and qN in tomato and lettuce seedlings. Supplying 6.0 mg·L-1 BPA did not change the fluorescence parameters in tomato seedlings, whereas it increased the F0 and qN in lettuce seedlings. At 10 mg·L-1 and 17.2 mg·L-1 BPA, the F0 was increased, but other fluorescence parameters were inhibited in tomato and lettuce seedlings, except increased qN in tomato seedlings at 10 mg·L-1 BPA. All fluorescence parameters could be restored when BPA was removed. However, the recovery decreased with increasing concentrations of BPA. Greater effects on the fluorescence parameters were observed in lettuce than in tomato seedlings, while the recovery was faster in tomato seedlings than lettuce seedlings. In conclusion, the effects of BPA on the chlorophyll fluorescence parameters are different in different crops. Chlorophyll fluorescence could resume to various degrees when BPA stress is removed.

  8. Influences of different environmental parameters on the sorption of trivalent metal ions on bentonite: batch sorption, fluorescence, EXAFS and EPR studies.

    Science.gov (United States)

    Verma, P K; Pathak, P N; Mohapatra, P K; Godbole, S V; Kadam, R M; Veligzhanin, A A; Zubavichus, Y V; Kalmykov, S N

    2014-04-01

    The presence of long-lived radionuclides in natural aquatic systems is of great environmental concern in view of their possible migration into biospheres of mankind. Trivalent actinides such as (241/243)Am can contribute a great deal to radioactivity for several thousand years. This migration is significantly influenced by various factors such as pH, complexing ions present in aquatic environments, and the sorption of species involving radionuclides by sediments around water bodies. Clay minerals such as bentonite are known to be highly efficient in radionuclide retention and hence are suitable candidates for backfill materials. This study presents experimental results on the interaction of Eu(iii) and Gd(iii) (chemical analogs of Am(iii) and Cm(iii)) with bentonite clay under varying experimental conditions of contact time, pH, and the presence of complexing anions such as humic acid (HA) and citric acid (cit). The sorption of HA on bentonite decreased with increasing the pH from 2 to 8, which was attributed to electrostatic interactions between HA and the bentonite surfaces. The sorption of Eu(iii) on bentonite colloids showed marginal variation with pH (>95%). However, a decrease in Eu(iii) sorption was observed in the presence of HA beyond pH 5 due to the increased aqueous complexation of Eu(iii) with deprotonated HA in the aqueous phase. The complexation of Eu(iii) with citrate ions was studied using Time Resolved Laser induced Fluorescence Spectroscopy (TRLFS) to explain the sorption data. Extended X-ray absorption fine structure (EXAFS) and electron paramagnetic resonance (EPR) investigations were carried out to understand the local chemical environment surrounding Eu(iii) and Gd(iii) (EPR probe) sorbed on bentonite under different experimental conditions. Surface complexation modelling shows the predominant formation of ≡XOEu(+2) (silanol) up to pH < 7, and beyond which ≡YOEu(OH)(+) (aluminol) is responsible for the quantitative sorption of Eu(iii) onto

  9. Performance Analysis of MODIS 500-m Spatial Resolution Products for Estimating Chlorophyll-a Concentrations in Oligo- to Meso-Trophic Waters Case Study: Itumbiara Reservoir, Brazil

    Directory of Open Access Journals (Sweden)

    Igor Ogashawara

    2014-02-01

    Full Text Available Monitoring chlorophyll-a (chl-a concentrations is important for the management of water quality, because it is a good indicator of the eutrophication level in an aquatic system. Thus, our main purpose was to develop an alternative technique to monitor chl-a in time and space through remote sensing techniques. However, one of the limitations of remote sensing is the resolution. To achieve a high temporal resolution and medium space resolution, we used the Moderate Resolution Imaging Spectroradiometer (MODIS 500-m reflectance product, MOD09GA, and limnological parameters from the Itumbiara Reservoir. With these data, an empirical (O14a and semi-empirical (O14b algorithm were developed. Algorithms were cross-calibrated and validated using three datasets: one for each campaign and a third consisting of a combination of the two individual campaigns. Algorithm O14a produced the best validation with a root mean square error (RMSE of 30.4%, whereas O14b produced an RMSE of 32.41% using the mixed dataset calibration. O14a was applied to MOD09GA to build a time series for the reservoir for the year of 2009. The time-series analysis revealed that there were occurrences of algal blooms in the summer that were likely related to the additional input of nutrients caused by rainfall runoff. During the winter, however, the few observed algal blooms events were related to periods of atmospheric meteorological variations that represented an enhanced external influence on the processes of mixing and stratification of the water column. Finally, the use of remote sensing techniques can be an important tool for policy makers, environmental managers and the scientific community with which to monitor water quality.

  10. Estimation of Chlorophyll-a Concentration and the Trophic State of the Barra Bonita Hydroelectric Reservoir Using OLI/Landsat-8 Images.

    Science.gov (United States)

    Watanabe, Fernanda Sayuri Yoshino; Alcântara, Enner; Rodrigues, Thanan Walesza Pequeno; Imai, Nilton Nobuhiro; Barbosa, Cláudio Clemente Faria; Rotta, Luiz Henrique da Silva

    2015-09-01

    Reservoirs are artificial environments built by humans, and the impacts of these environments are not completely known. Retention time and high nutrient availability in the water increases the eutrophic level. Eutrophication is directly correlated to primary productivity by phytoplankton. These organisms have an important role in the environment. However, high concentrations of determined species can lead to public health problems. Species of cyanobacteria produce toxins that in determined concentrations can cause serious diseases in the liver and nervous system, which could lead to death. Phytoplankton has photoactive pigments that can be used to identify these toxins. Thus, remote sensing data is a viable alternative for mapping these pigments, and consequently, the trophic. Chlorophyll-a (Chl-a) is present in all phytoplankton species. Therefore, the aim of this work was to evaluate the performance of images of the sensor Operational Land Imager (OLI) onboard the Landsat-8 satellite in determining Chl-a concentrations and estimating the trophic level in a tropical reservoir. Empirical models were fitted using data from two field surveys conducted in May and October 2014 (Austral Autumn and Austral Spring, respectively). Models were applied in a temporal series of OLI images from May 2013 to October 2014. The estimated Chl-a concentration was used to classify the trophic level from a trophic state index that adopted the concentration of this pigment-like parameter. The models of Chl-a concentration showed reasonable results, but their performance was likely impaired by the atmospheric correction. Consequently, the trophic level classification also did not obtain better results.

  11. Estimation of Chlorophyll-a Concentration and the Trophic State of the Barra Bonita Hydroelectric Reservoir Using OLI/Landsat-8 Images

    Directory of Open Access Journals (Sweden)

    Fernanda Sayuri Yoshino Watanabe

    2015-08-01

    Full Text Available Reservoirs are artificial environments built by humans, and the impacts of these environments are not completely known. Retention time and high nutrient availability in the water increases the eutrophic level. Eutrophication is directly correlated to primary productivity by phytoplankton. These organisms have an important role in the environment. However, high concentrations of determined species can lead to public health problems. Species of cyanobacteria produce toxins that in determined concentrations can cause serious diseases in the liver and nervous system, which could lead to death. Phytoplankton has photoactive pigments that can be used to identify these toxins. Thus, remote sensing data is a viable alternative for mapping these pigments, and consequently, the trophic. Chlorophyll-a (Chl-a is present in all phytoplankton species. Therefore, the aim of this work was to evaluate the performance of images of the sensor Operational Land Imager (OLI onboard the Landsat-8 satellite in determining Chl-a concentrations and estimating the trophic level in a tropical reservoir. Empirical models were fitted using data from two field surveys conducted in May and October 2014 (Austral Autumn and Austral Spring, respectively. Models were applied in a temporal series of OLI images from May 2013 to October 2014. The estimated Chl-a concentration was used to classify the trophic level from a trophic state index that adopted the concentration of this pigment-like parameter. The models of Chl-a concentration showed reasonable results, but their performance was likely impaired by the atmospheric correction. Consequently, the trophic level classification also did not obtain better results.

  12. Empirical model for chlorophyll-a determination in inland waters from the forthcoming Sentinel-2 and 3. Validation from HICO images

    Directory of Open Access Journals (Sweden)

    J. Delegido

    2014-06-01

    Full Text Available Chlorophyll-a concentration is one of the main indicators of inland waters quality. Using CHRIS/PROBA images and in situ data obtained in four lakes in Colombia and Spain, we obtained empirical models for the estimation of chlorophyll-a concentration, which can be directly applied to future images of MSI Sentinel-2 and OLCI Sentinel-3 sensors. The models, based on spectral band indices, were validated with data from the hyperspectral sensor HICO, onboard of the International Space Station.

  13. Near infrared-red models for the remote estimation of chlorophyll- a concentration in optically complex turbid productive waters: From in situ measurements to aerial imagery

    Science.gov (United States)

    Gurlin, Daniela

    Today the water quality of many inland and coastal waters is compromised by cultural eutrophication in consequence of increased human agricultural and industrial activities and remote sensing is widely applied to monitor the trophic state of these waters. This study explores near infrared-red models for the remote estimation of chlorophyll-a concentration in turbid productive waters and compares several near infrared-red models developed within the last 35 years. Three of these near infrared-red models were calibrated for a dataset with chlorophyll-a concentrations from 2.3 to 81.2 mg m -3 and validated for independent and statistically significantly different datasets with chlorophyll-a concentrations from 4.0 to 95.5 mg m-3 and 4.0 to 24.2 mg m-3 for the spectral bands of the MEdium Resolution Imaging Spectrometer (MERIS) and Moderate-resolution Imaging Spectroradiometer (MODIS). The developed MERIS two-band algorithm estimated chlorophyll-a concentrations from 4.0 to 24.2 mg m-3, which are typical for many inland and coastal waters, very accurately with a mean absolute error 1.2 mg m-3. These results indicate a high potential of the simple MERIS two-band algorithm for the reliable estimation of chlorophyll-a concentration without any reduction in accuracy compared to more complex algorithms, even though more research seems required to analyze the sensitivity of this algorithm to differences in the chlorophyll-a specific absorption coefficient of phytoplankton. Three near infrared-red models were calibrated and validated for a smaller dataset of atmospherically corrected multi-temporal aerial imagery collected by the hyperspectral airborne imaging spectrometer for applications (AisaEAGLE). The developed algorithms successfully captured the spatial and temporal variability of the chlorophyll-a concentrations and estimated chlorophyll- a concentrations from 2.3 to 81.2 mg m-3 with mean absolute errors from 4.4 mg m-3 for the AISA two band algorithm to 5.2 mg m-3

  14. Fluorescence spectral properties of outer antenna LHC II

    CERN Document Server

    He Jun Fang; Zhang, Shu; He Fang Tao; Ren Zhao You; Li Liang Bi; Kuang Ting Yun

    2002-01-01

    Outer antenna LHC II acts to absorb and transfer energy for photosynthesis. The authors studied the fluorescence properties of LHC II of spinach with scanning imaging fluorescence spectroscopy. After it had been excited by 514.5 nm laser, the integral fluorescence spectrum of LHC II was detected. It was shown that energy transfer existed between carotenoid and chlorophyll. Seven bands of LHC II fluorescence emission were resolved by Gauss combination, viz. 656.7, 664.6, 671.5, 677.2, 683.5, 689.6, 695.3 nm, and the percentages of them were 3.0%, 13.1%,13.3%, 21.1%, 13.2%, 33.3%, 3.0% respectively. The emission of 658.7 nm was attributed to chlorophyll b, the other emission bands were produced by chlorophyll a molecules with the maximum absorption 662, 670/671, 676, 680 nm and over 690 nm. The band 656.7 nm, whose percentage was 3.0%, shows that the most energy was absorbed by chlorophyll a. The percentage of band 689.6 nm was the most, which was possibly correlated with one type of self protective mechanism o...

  15. Zinc fixation preserves flow cytometry scatter and fluorescence parameters and allows simultaneous analysis of DNA content and synthesis, and intracellular and surface epitopes

    DEFF Research Database (Denmark)

    Jensen, Uffe Birk; Owens, David; Pedersen, Søren;

    2010-01-01

    Zinc salt-based fixation (ZBF) has proved advantageous in histochemical analyses conducted on intact tissues but has not been exploited in flow cytometry procedures that focus on quantitative analysis of individual cells. Here, we show that ZBF performs equally well to paraformaldehyde in the pre......Zinc salt-based fixation (ZBF) has proved advantageous in histochemical analyses conducted on intact tissues but has not been exploited in flow cytometry procedures that focus on quantitative analysis of individual cells. Here, we show that ZBF performs equally well to paraformaldehyde...... allowing subsequent quantitative PCR analysis or labeling for incorporation of the thymidine analog EdU following surface and intracellular epitope staining. Finally, ZBF treatment allows for long-term storage of labeled cells with little change in these parameters. Thus, we present a protocol for zinc...... salt fixation of cells that allows for the simultaneous analysis of DNA and intracellular and cell surface proteins by flow cytometry....

  16. Characterizing the Conformational Change Process of Bovine Serum Albumin Solution by Fluorescence Parameters%用荧光参数表征牛血清白蛋白溶液的构象变化过程

    Institute of Scientific and Technical Information of China (English)

    晋可; 张家兴; 尹宗宁

    2013-01-01

    目的 对牛血清白蛋白在盐酸胍中的构象变化过程进行研究,根据荧光参数的变化,建立蛋白构象与环境变化的关系,从分子水平探讨蛋白质构象变化而致不稳定的原因.方法 采用内源性荧光法,荧光淬灭法及荧光探针法研究牛血清白蛋白在盐酸胍中的构象变化过程.结果 在变性过程中,随着盐酸胍浓度的增加,牛血清白蛋白内源性色氨酸荧光峰位先蓝移后红移,荧光强度逐步衰减;8-苯胺基-1-萘磺酸-牛血清白蛋白结合物荧光峰位逐步红移,荧光强度逐渐衰减;丙烯酰胺对牛血清白蛋白的荧光淬灭常数KSV在盐酸胍浓度为0.5 mol· L-1时降至最低3.469×108L· mol-1·s-1.结论 在盐酸胍诱导的变性过程中,牛血清白蛋白的色氨酸残基所处区域构象经历了一个先紧缩后舒展的三态过程.而8-苯胺基-1-萘磺酸探针结合位点与色氨酸残基可能位于牛血清白蛋白的不同区域,且构象变化更为灵敏.%OBJECTIVE To study the conformational change process of bovine serum albumin ( BSA) in guanidinium chloride through evaluating the fluorescence parameters, thus to elucidate the phenomenon from molecular level and to establish the relationship between the conformation of protein and the environment. METHODS Intrinsic tryptophan fluorescence, fluorescence quenching and fluorescence probes spectrophotometry were selected to study the denaturation process of BSA in guanidinium chloride. RESULTS An attenuation of intensity was observed both in BSA and ANS-BSA conjugates with the increasing concentration of guanidium chloride. A red shift on fluorescence emission peak occurred in the ANS-BSA conjugates, while the same result appeared in BSA only after a blue shift. The fluorescence quenching constant KSV reduced to its minimum 3.469 ×108L· mol-1 ·s-1 in 0.5 mol·L-1 guanidium. CONCLUSION It was shown that the denaturation process of BSA in guanidinium chloride was consistent

  17. Toxic Effects of Ethyl Cinnamate on the Photosynthesis and Physiological Characteristics of Chlorella vulgaris Based on Chlorophyll Fluorescence and Flow Cytometry Analysis

    Directory of Open Access Journals (Sweden)

    Yang Jiao

    2015-01-01

    Full Text Available The toxic effects of ethyl cinnamate on the photosynthetic and physiological characteristics of Chlorella vulgaris were studied based on chlorophyll fluorescence and flow cytometry analysis. Parameters, including biomass, Fv/Fm (maximal photochemical efficiency of PSII, ФPSII (actual photochemical efficiency of PSII in the light, FDA, and PI staining fluorescence, were measured. The results showed the following: (1 The inhibition on biomass increased as the exposure concentration increased. 1 mg/L ethyl cinnamate was sufficient to reduce the total biomass of C. vulgaris. The 48-h and 72-h EC50 values were 2.07 mg/L (1.94–2.20 and 1.89 mg/L (1.82–1.97. (2 After 24 h of exposure to 2–4 mg/L ethyl cinnamate, the photosynthesis of C. vulgaris almost ceased, manifesting in ФPSII being close to zero. After 72 h of exposure to 4 mg/L ethyl cinnamate, the Fv/Fm of C. vulgaris dropped to zero. (3 Ethyl cinnamate also affected the cellular physiology of C. vulgaris, but these effects resulted in the inhibition of cell yield rather than cell death. Exposure to ethyl cinnamate resulted in decreased esterase activities in C. vulgaris, increased average cell size, and altered intensities of chlorophyll a fluorescence. Overall, esterase activity was the most sensitive variable.

  18. Toxic Effects of Ethyl Cinnamate on the Photosynthesis and Physiological Characteristics of Chlorella vulgaris Based on Chlorophyll Fluorescence and Flow Cytometry Analysis.

    Science.gov (United States)

    Jiao, Yang; Ouyang, Hui-Ling; Jiang, Yu-Jiao; Kong, Xiang-Zhen; He, Wei; Liu, Wen-Xiu; Yang, Bin; Xu, Fu-Liu

    2015-01-01

    The toxic effects of ethyl cinnamate on the photosynthetic and physiological characteristics of Chlorella vulgaris were studied based on chlorophyll fluorescence and flow cytometry analysis. Parameters, including biomass, F(v)/F(m) (maximal photochemical efficiency of PSII), Ф(PSII) (actual photochemical efficiency of PSII in the light), FDA, and PI staining fluorescence, were measured. The results showed the following: (1) The inhibition on biomass increased as the exposure concentration increased. 1 mg/L ethyl cinnamate was sufficient to reduce the total biomass of C. vulgaris. The 48-h and 72-h EC50 values were 2.07 mg/L (1.94-2.20) and 1.89 mg/L (1.82-1.97). (2) After 24 h of exposure to 2-4 mg/L ethyl cinnamate, the photosynthesis of C. vulgaris almost ceased, manifesting in Ф(PSII) being close to zero. After 72 h of exposure to 4 mg/L ethyl cinnamate, the Fv /Fm of C. vulgaris dropped to zero. (3) Ethyl cinnamate also affected the cellular physiology of C. vulgaris, but these effects resulted in the inhibition of cell yield rather than cell death. Exposure to ethyl cinnamate resulted in decreased esterase activities in C. vulgaris, increased average cell size, and altered intensities of chlorophyll a fluorescence. Overall, esterase activity was the most sensitive variable.

  19. Chloroplast fluorescence as a characteristic parameter in bioindication. Microscope fluorimetry of boundary effects and SO/sub 2/ effects in mosses. Die Chloroplastenfluoreszenz als Kenngroesse in der Bioindikation. Mikroskopfluorimetrie von Randeffekten und SO/sub 2/-Wirkungen bei Moosen

    Energy Technology Data Exchange (ETDEWEB)

    Schiele, S.

    1985-01-18

    The applicability of chloroplast fluorescence of mosses for bioindication was investigated. Laboratory-scale SO/sub 2/ exposure experiments proved the sensitivity of chloroplast fluorescence well before any visible damage occurred.

  20. Probing of the local environment and calculation of J.O. parameters for Eu{sup 3+} CMPO functionalized pillararene complexes by time resolved fluorescence spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Sengupta, Arijit, E-mail: arijita@barc.gov.in [Radiochemistry Division, Bhabha Atomic Research Centre, Mumbai 400085 (India); Fang, Yuyu; Yuan, Xiangyang; Yuan, Lihua [Key Laboratory for Radiation Physics and Technology of Ministry of Education, Institute of Nuclear Science and Technology, College of Chemistry, Sichuan University, Chengdu 610064 (China)

    2015-10-15

    An attempt was made to understand the complexation of Eu{sup 3+} with structurally modified CMPO-functionalized pillararenes by luminescence spectroscopy. Formation of single species with different numbers of inner sphere water molecules was found to be present for all the complexes. On increasing spacer length between ligating moieties and supramolecular pillararenes, the stereo-chemical crowding around ligating oxygen decreased. Therefore, strong covalent metal–oxygen bond was formed which was reflected in the increasing trend of the computed Ω{sub 2} values (Judd–Offelt parameter): LI (4.66×10{sup −20})LII (3.19 ms)>LIII (2.94 ms) while the branching ratio values for all three complexes followed the same trend as β{sub 2}>β{sub 4}>β{sub 1}. The other photo-physical constants like asymmetric factor, quantum efficiency, magnetic and electric dipole transition probabilities were also computed. - Highlights: • Probing of the local environment of Eu{sup 3+} complex with three structurally modified CMPO functionalized pillararenes. • J.O. parameter Ω{sub 2} followed the trend: LI (4.66E−20)

  1. The relative influence of local and regional environmental drivers of algal biomass (chlorophyll-a) varies by estuarine location

    Science.gov (United States)

    Wainger, Lisa; Yu, Hao; Gazenski, Kim; Boynton, Walter

    2016-09-01

    A major question in restoring estuarine water quality is whether local actions to manage excess nutrients can be effective, given that estuaries are also responding to tidal inputs from adjacent water bodies. Several types of statistical analysis were used to examine spatially-detailed and long-term water quality monitoring data in eight sub-estuaries of Chesapeake Bay. These sub-estuaries are likely to be similar to other shallow systems with moderate to long water residence times. Statistical cluster analysis of spatial water quality data suggested that estuaries had spatially distinct water quality zones and that the peak algal biomass (as measured by chlorophyll-a) was most often controlled by local watershed inputs in all but one estuary, although mainstem inputs affected most estuaries at some times and places. An elasticity indicator that compared inter-annual changes in sub-estuaries to parallel changes in the mainstem Chesapeake Bay supported the idea that water quality in sub-estuaries was not strongly coupled to the mainstem. A cross-channel zonation of water quality observed near the mouth of estuaries suggested that Bay influences were stronger on the right side of the lower channel (looking up estuary) at times in all estuaries, and was most common in small estuaries closest to the mouth of the primary water source to the estuary. Where Bay influences were strong, estuarine water quality would be expected to be less responsive to nutrient reductions made in the local watershed. Regression analysis was used to evaluate hypothesized relationships between environmental driver variables and average chlorophyll-a (chl-a) concentrations. Chl-a values were calculated from unusually detailed levels of spatial sampling, potentially providing a more comprehensive view of system conditions than that provided by traditional sparse sampling networks. The univariate models with the best data support to explain variability in averaged chl-a concentration were those

  2. 初花期干旱对不同抗旱性紫花苜蓿光合特征及荧光参数的影响%Responses of Photosynthetic Characters and Fluorescence Parameters of Alfalfa with Different Drought Tolerances to Drought

    Institute of Scientific and Technical Information of China (English)

    李立辉; 王岩; 胡海燕; 赵天宏; 郭书嫄; 王伟; 姚欣

    2015-01-01

    Taking alfalfa (Medicago sativa ) cv.Golden Empress (drought-resistance ) and cv.Sanditi (drought-sensitivity)as target materials,we set four treatments including normal water supply (CK),light drought stress (LS),middle drought stress (MS)and severe drought stress (SS)treatments to investigate the responses of photosynthetic characters (including photosynthetic rate,chlorophyll content and fluorescence parameters)of differ-ent alfalfa to drought at initial bloom stage.The results suggested that drought reduced the net photosynthetic rate, stomatal conductance,intercellular CO2 concentration and transpiration rate but increased stomatal limitation value, and water use efficiency increased and then decreased at two alfalfa,while cv.Golden Empress had a smaller de-creasing magnitude in photosynthetic rate comparing with that of cv.Sanditi.Light drought enhanced the content of chlorophylla,chlorophyll(a +b)and chlorophylla /b but middle drought and severe drought both hampered their in-creases.Drought also significantly increased the minimal fluorescence (Fo)but made actual photochemical efficien-cy of PSⅡ in the light (φPS Ⅱ),electron transport rate (ETR)and maximal photochemical efficiency of PS Ⅱ(Fv /Fm)decreased.However,light drought increased the potential activity of PSⅡ (Fv /Fo)but middle and se-vere drought showed an inverse trend.Drought obviously reduced the aboveground biomass when the drought oc-curred but made little effect on the aboveground biomass except a slight increase under light drought.The decrease of Pn was primarily contributed by the stomatal restriction,while alfalfa exhibited obvious stress responses under slight drought,which kept it having a high Pn.In conclusion,the response of cv.Golden Empress to drought was mild,which indicated a high drought tolerance.%干旱是人类面临的日益频繁的气候问题,揭示干旱对紫花苜蓿光合作用的影响有助于阐明紫花苜蓿的营养品质对干旱的响应规律。以2

  3. Chlorophyll a Fluorescence as a Tool in Evaluating the Effects of ABA Content and Ethylene Inhibitors on Quality of Flowering Potted Bougainvillea

    OpenAIRE

    Antonio Ferrante; Alice Trivellini; Eva Borghesi; Paolo Vernieri

    2012-01-01

    Flowering potted plants during the postproduction stage are usually stored in inadequate environmental conditions. We evaluated the effect of the most common storage conditions and treatments on two Bougainvillea cultivars after harvest and during recovery. Flowering potted Bougainvillea plants were treated with 100 mL 2 mM amino-oxyacetic acid (AOA) or 500 ppb 1-methylcyclopropene (1-MCP) prior storage in dark at 14∘C for simulating transport or storage conditions and, subsequently, transfer...

  4. Normal-Phase Open Column versus Reversed-Phase High Performance Liquid Chromatography: Separation of Chlorophyll a and Chlorophyll b from their Diastereomers.

    Science.gov (United States)

    Schaber, Peter M.

    1985-01-01

    Background information, procedures used, and typical results obtained are provided for an experiment involving the separation of chlorophyll a and chlorophyll b from their diastereomers. Reasons why the experiment can be easily integrated into most laboratory curricula where high-performance liquid chromatography capabilities exist are given. (JN)

  5. Chlorophyll-a concentration estimation with three bio-optical algorithms: correction for the low concentration range for the Yiam Reservoir, Korea

    Science.gov (United States)

    Bio-optical algorithms have been applied to monitor water quality in surface water systems. Empirical algorithms, such as Ritchie (2008), Gons (2008), and Gilerson (2010), have been applied to estimate the chlorophyll-a (chl-a) concentrations. However, the performance of each algorithm severely degr...

  6. Comparison of satellite reflectance algorithms for estimating chlorophyll-a in a temperate reservoir using coincident hyperspectral aircraft imagery and dense coincident surface observations

    Science.gov (United States)

    We analyzed 10 established and 4 new satellite reflectance algorithms for estimating chlorophyll-a (Chl-a) in a temperate reservoir in southwest Ohio using coincident hyperspectral aircraft imagery and dense water truth collected within one hour of image acquisition to develop si...

  7. Response of Sea Surface Temperature to Chlorophyll-a Concentration in the Tropical Pacific:Annual Mean,Seasonal Cycle,and Interannual Variability

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    The response of the upper-ocean temperatures and currents in the tropical Pacific to the spatial distribution of chlorophyll-a and its seasonal cycle is investigated using a coupled atmosphere-ocean model and a stand-alone oceanic general circulation model.The spatial distribution of chlorophyll-a significantly influences the mean state of models in the tropical Pacific.The annual mean SST in the eastern equatorial Pacific decreases accompanied by a shallow thermocline and stronger currents because of shallow penetration depth of solar radiation.Equatorial upwelling dominates the heat budget in that region.Atmosphere-ocean interaction processes can further amplify such changes. The seasonal cycle of chlorophyll-a can dramatically change ENSO period in the coupled model.After introducing the seasonal cycle of chlorophyll-a concentration,the peak of the power spectrum becomes broad,and longer periods(〉3 years) are found.These changes led to ENSO irregularities in the model. The increasing period is mainly due to the slow speed of Rossby waves,which are caused by the shallow mean thermocline in the northeastern Pacific.

  8. Response of Sea Surface Temperature to Chlorophyll-a Concentration in the Tropical Pacific: Annual Mean,Seasonal Cycle, and Interannual Variability

    Institute of Scientific and Technical Information of China (English)

    LIN Pengfei; LIU Hailong; YU Yongqiang; ZHANG Xuehong

    2011-01-01

    The response of the upper-ocean temperatures and currents in the tropical Pacific to the spatial distribution of chlorophyll-a and its seasonal cycle is investigated using a coupled atmosphere-ocean model and a stand-alone oceanic general circulation model. The spatial distribution of chlorophyll-a significantly influences the mean state of models in the tropical Pacific. The annual mean SST in the eastern equatorial Pacific decreases accompanied by a shallow thermocline and stronger currents because of shallow penetration depth of solar radiation. Equatorial upwelling dominates the heat budget in that region. Atmosphere-ocean interaction processes can further amplify such changes.The seasonal cycle of chlorophyll-a can dramatically change ENSO period in the coupled model. After introducing the seasonal cycle of chlorophyll-a concentration, the peak of the power spectrum becomes broad, and longer periods (>3 years) are found. These changes led to ENSO irregularities in the model.The increasing period is mainly due to the slow speed of Rossby waves, which are caused by the shallow mean thermocline in the northeastern Pacific.

  9. Satellite remote sensing of chlorophyll a in support of nutrient management in the Neuse and Tar-Pamlico River (North Carolina) estuaries

    Science.gov (United States)

    The North Carolina Environmental Management Commission (EMC) has adopted as a water quality standard that chlorophyll a concentration should not exceed 40 ug/L in sounds, estuaries and other slow-moving waters. Exceedances require regulators to develop a Total Maximum Daily Limit...

  10. Interannual and seasonal variation of chlorophyll-a off the Yellow River Mouth (1997-2012): Dominance of river inputs and coastal dynamics

    Science.gov (United States)

    Wu, Xiao; Duan, Haiqin; Bi, Naishuang; Yuan, Ping; Wang, Aimei; Wang, Houjie

    2016-12-01

    The temporal variations of sea surface chlorophyll-a concentration off the Yellow River Mouth were investigated using SeaWiFS and MODIS data over the period of 1997-2012. And the complex interplay of different dominant factors (e.g. river inputs and coastal dynamics) on the phytoplankton dynamics in different seasons was discussed. High concentration of nutrients from the Yellow River inputs plays a significant role in sustaining phytoplankton growth. Approximately 59% of the interannual variations of the chlorophyll-a concentration off the Yellow River Mouth were attributed to river inputs (water discharge, sediment load and median grain size of sediment particles). On seasonal time scale, the Yellow River discharge of water and nutrients is a major factor that influences the increased chlorophyll-a concentration from August to October (summer and autumn). From February to May, the stronger winds and enhanced wave actions resuspend and vertically mix the previously deposited riverine sediment and the associated nutrient, thus possibly contributing to higher chlorophyll-a concentration.

  11. Relation Between Chlorophyll-A Concentration and Red Tide in the Intensive Study Area of the Ariake Sea, Japan in Winter Seasons by using MODIS Data

    Directory of Open Access Journals (Sweden)

    Kohei Arai

    2015-10-01

    Full Text Available Relation between chlorophyll-a concentration and red tide in the intensive study area of the back of Ariake Sea, Japan in the recent winter seasons is investigated by using MODIS data. Mechanism of red tide appearance is not so clarified. On the other hand, chlorophyll-a concentration can be estimated with satellite remote sensing data. An attempt is made for estimation of the location and size of red tide appearance. In particular, severe damage due to red tide is suspected in the winter seasons now a day. Therefore, 6 years (winter 2010 to winter 2015 data of MODIS data derived chlorophyll-a concentration and truth data of red tide appearance (the location and the volume which are provided by Saga Prefectural Fishery Promotion Center: SPFPC (once/10 days of shipment data have been investigated. As the results of the investigation, it is found that a strong correlation between the chlorophyll-a concentration and red tide appearance together with the possible sources of the red tide.

  12. Enhanced chlorophyll a and primary production in the northern Arabian Sea during the spring intermonsoon due to green Noctiluca scintillans bloom

    Digital Repository Service at National Institute of Oceanography (India)

    Madhu, N.V.; Jyothibabu, R.; Maheswaran, P.A.; Jayaraj, K.A.; Achuthankutty, C.T.

    . This was caused primarily by a thick algal bloom spread over a vast area between 17-21 degrees N and 66-70 degrees E. Satellite images showed exceptionally high concentration of chlorophyll a in the bloom area, representing the annually occurring 'spring blooms...

  13. Optical remote sensing of chlorophyll a in case 2 waters by use of an adaptive two-band algorithem with optical error properties

    NARCIS (Netherlands)

    Ruddick, K.G.; Gons, H.J.; Rijkeboer, M.; Tilstone, G.

    2001-01-01

    Two-band algorithms that use the ratio of reflectances at 672 and 704 nm have already proved successful for chlorophyll a retrieval in a range of coastal and inland waters. An analysis of the effect of reflectance measurement errors on such algorithms is made. It provides important indications of th

  14. Spectral and Temporal Laser Fluorescence Analysis Such as for Natural Aquatic Environments

    Science.gov (United States)

    Chekalyuk, Alexander (Inventor)

    2015-01-01

    An Advanced Laser Fluorometer (ALF) can combine spectrally and temporally resolved measurements of laser-stimulated emission (LSE) for characterization of dissolved and particulate matter, including fluorescence constituents, in liquids. Spectral deconvolution (SDC) analysis of LSE spectral measurements can accurately retrieve information about individual fluorescent bands, such as can be attributed to chlorophyll-a (Chl-a), phycobiliprotein (PBP) pigments, or chromophoric dissolved organic matter (CDOM), among others. Improved physiological assessments of photosynthesizing organisms can use SDC analysis and temporal LSE measurements to assess variable fluorescence corrected for SDC-retrieved background fluorescence. Fluorescence assessments of Chl-a concentration based on LSE spectral measurements can be improved using photo-physiological information from temporal measurements. Quantitative assessments of PBP pigments, CDOM, and other fluorescent constituents, as well as basic structural characterizations of photosynthesizing populations, can be performed using SDC analysis of LSE spectral measurements.

  15. Measurements of chlorophyll fluorescence as an auxiliary method in estimating susceptibility of cultivated hazel (Corylus L. for filbert aphid (Myzocallis coryli goetze

    Directory of Open Access Journals (Sweden)

    Magdalena Gantner

    2012-12-01

    Full Text Available The influence of aphid feeding on chlorophyll a fluorescence in the leaves of four cultivated hazel cultivars, with different levels of resistance to filbert aphid (Myzocallis coryli Goetze, was studied. The maximum effect of photosystem reaction measured on dark-adapted hazel leaves (Fv/Fm parameter and maximum efficiency of photon energy PAR conversion to chemical energy in light conditions (Y parameter were estimated twice, in the leaves of four hazel cultivars with different levels of resistance to filbert aphid, using a fluorometer PAM- 2000 by Walz GmbH - Germany. The analysis of changes of these parameters showed that aphid feeding caused a reaction in all tested cultivars. The most visible reduction of the Fv/Fm and Y values as a result of aphid feeding was observed in the cultivars 'Cud z Bollwiller' and 'Olbrzymi z Halle', numerously colonized by aphids. A smaller number of aphids found on the leaves of more resistant cultivars - 'Kataloński' and 'Lamberta Biały', caused a weaker response of plants and a smaller decline in the value of this parameter. 'Cud z Bollwiller' cultivar showed higher tolerance than other tested cultivars to stress caused by the feeding of sucking insects. The Fv/Fm and Y parameters can be regarded as reliable indexes useful in diagnosing susceptibility of hazel cultivars to aphids, helpful in determining, for example, harmfulness thresholds.

  16. Phosphorus, nitrogen and chlorophyll-a are significant factors controlling ciliate communities in summer in the northern Beibu Gulf, South China Sea.

    Science.gov (United States)

    Wang, Yibo; Zhang, Wenjing; Lin, Yuanshao; Cao, Wenqing; Zheng, Lianming; Yang, Jun

    2014-01-01

    Ciliates (protozoa) are ubiquitous components of plankton community and play important roles in aquatic ecosystems in regards of their abundance, biomass, diversity and energy turnover. Based on the stratified samples collected from the northern Beibu Gulf in August 2011, species composition, abundance, biomass, diversity and spatial pattern of planktonic ciliates were studied. Furthermore the main environmental factors controlling ciliate communities were determined. A total of 101 species belonging to 44 genera and 7 orders (i.e., Oligotrichida, Haptorida, Euplotida, Sessilida, Pleurostomatida, Scuticociliatida and Tintinnida) were identified. The variation of ciliate communities was significant at horizontal level, but that was not at vertical level. Based on cluster analysis, ciliate communities were divided into three main groups. Redundancy analysis (RDA) revealed that Group A, existing in the waters with higher concentration of phosphorus and nitrogen, was dominated by Tintinnidium primitivum. Group B in the waters with lower temperature and chlorophyll-a concentration, was dominated by Leegaardiella ovalis. Group C, existing in the waters with higher temperature and chlorophyll-a concentration, was dominated by large Strombidium spp. and Mesodinium rubrum. Combining multiple analytic methods, our results strongly supported that phosphorus, nitrogen and chlorophyll-a were the most significant factors affecting the ciliate communities in the northern Beibu Gulf in summer. Concentration of phosphorus and nitrogen primarily influenced ciliate biomass, implying a potential impact of eutrophication on ciliate growth. The correlation with chlorophyll-a concentration, on one hand indicate the response of ciliates to the food availability, and on the other hand, the ciliates containing chloroplasts or endosymbionts may contribute greatly to the chlorophyll-a.

  17. Phosphorus, nitrogen and chlorophyll-a are significant factors controlling ciliate communities in summer in the northern Beibu Gulf, South China Sea.

    Directory of Open Access Journals (Sweden)

    Yibo Wang

    Full Text Available Ciliates (protozoa are ubiquitous components of plankton community and play important roles in aquatic ecosystems in regards of their abundance, biomass, diversity and energy turnover. Based on the stratified samples collected from the northern Beibu Gulf in August 2011, species composition, abundance, biomass, diversity and spatial pattern of planktonic ciliates were studied. Furthermore the main environmental factors controlling ciliate communities were determined. A total of 101 species belonging to 44 genera and 7 orders (i.e., Oligotrichida, Haptorida, Euplotida, Sessilida, Pleurostomatida, Scuticociliatida and Tintinnida were identified. The variation of ciliate communities was significant at horizontal level, but that was not at vertical level. Based on cluster analysis, ciliate communities were divided into three main groups. Redundancy analysis (RDA revealed that Group A, existing in the waters with higher concentration of phosphorus and nitrogen, was dominated by Tintinnidium primitivum. Group B in the waters with lower temperature and chlorophyll-a concentration, was dominated by Leegaardiella ovalis. Group C, existing in the waters with higher temperature and chlorophyll-a concentration, was dominated by large Strombidium spp. and Mesodinium rubrum. Combining multiple analytic methods, our results strongly supported that phosphorus, nitrogen and chlorophyll-a were the most significant factors affecting the ciliate communities in the northern Beibu Gulf in summer. Concentration of phosphorus and nitrogen primarily influenced ciliate biomass, implying a potential impact of eutrophication on ciliate growth. The correlation with chlorophyll-a concentration, on one hand indicate the response of ciliates to the food availability, and on the other hand, the ciliates containing chloroplasts or endosymbionts may contribute greatly to the chlorophyll-a.

  18. A field study on the conversion ratio of phytoplankton biomass carbon to chlorophyll-a in Jiaozhou Bay, China

    Institute of Scientific and Technical Information of China (English)

    L(U) Shuguo; Wang Xuchen; Han Boping

    2009-01-01

    A one-year field study was conducted to determine the conversion ratio of phytoplankton biomass carbon (Phyto-C) to chlorophyll-a (Chl-a) in Jiaozhou Bay, China. We measured suspended particulate organic carbon (POC) and phytoplankton Chl-a samples collected in surface water monthly from March 2005 to February 2006. The temporal and spatial variations of Chl-a and POC concentrations were observed in the bay. Based on the field measurements, a linear regression model II was used to generate the conversion ratio of Phyto-C to Chl-a. In most cases, a good linear correlation was found between the observed POC and Chl-a concentrations, and the calculated conversion ratios ranged from 26 to 250 with a mean value of 56 ìg ìg~(-1). The conversion ratio in the fall was higher than that in the winter and spring months, and had the lowest values in the summer. The ratios also exhibited spatial variations, generally with low values in the near shore regions and relatively high values in offshore waters. Our study suggests that temperature was likely to be the main factor influencing the observed seasonal variations of conversion ratios while nutrient supply and light penetration played important roles in controlling the spatial variations.

  19. Interannual variability of remotely sensed chlorophyll a during an autumn monsoon transitional period in the Taiwan Strait

    Institute of Scientific and Technical Information of China (English)

    ZHANG Caiyun; HONG Huasheng

    2014-01-01

    The time series of multiple sources of satellite data are used to examine the interannual variability of chlo-rophyll a concentration (Chl a) and its relation to the physical environment during the autumn monsoon transitional period in the Taiwan Strait (TWS). The satellite data included the Chl a concentration and sea surface temperature (SST) derived from the Moderate Resolution Imaging Spectroradiometer (MODIS)/Aqua as well as the multi-sensors merged wind products from 2002 to 2012. The results show that the aver-age Chl a concentration of the whole TWS is mainly contributed by the northern TWS. The average Chl a in the northern TWS is 3.6 times that in the southern TWS. The maximum variability of Chl a is located in the frontal regions between the cold Zhe-Min Coastal Water and the strait warm water. The temporal change of Chl a concentration is different in the northern and southern TWS. The changes in the relative strength of the cold and warm water masses is suggested to be the dominant processes in controlling the phytoplankton growth in the northern TWS, while there is wind-induced mixing in the southern TWS. Additionally, La Niña events exhibited complex effects on the interannual variability of Chl a concentration in autumn. The long-term time series of physical and biological observations are especially needed to better understand how the TWS complex ecosystem responds to climate variations.

  20. Empirical and semi-analytical chlorophyll a algorithms for multi-temporal monitoring of New Zealand lakes using Landsat.

    Science.gov (United States)

    Allan, Mathew G; Hamilton, David P; Hicks, Brendan; Brabyn, Lars

    2015-06-01

    The concentration of chlorophyll a (chl a; as a proxy for phytoplankton biomass) provides an indication of the water quality and ecosystem health of lakes. An automated image processing method for Landsat images was used to derive chl a concentrations in 12 Rotorua lakes of North Island, New Zealand, with widely varying trophic status. Semi-analytical and empirical models were used to process 137 Landsat 7 Enhanced Thematic Mapper (ETM+) images using records from 1999 to 2013. Atmospheric correction used radiative transfer modelling, with atmospheric conditions prescribed with Moderate Resolution Imaging Spectroradiometer (MODIS) Terra and AIRS data. The best-performing semi-analytical and empirical equations resulted in similar levels of variation explained (r (2) = 0.68 for both equations) and root-mean-square error (RMSE = 10.69 and 10.43 μg L(-1), respectively) between observed and estimated chl a. However, the symbolic regression algorithm performed better for chl a concentrations Landsat-based algorithms provide a valuable method for synoptic assessments of chl a across the 12 lakes in this region. They also provide a basis for assessing changes in chl a individual lakes through time. Our methods provide a basis for cost-effective hindcasting of lake trophic status at a regional scale, informing on spatial variability of chl a within and between lakes.

  1. Wet season upwelling and dry season chlorophyll-a describe interannual growth rates of Porites in southern China.

    Directory of Open Access Journals (Sweden)

    Teng Teng Yang

    Full Text Available Southern China hosts coral communities in marginal environments that are characterized by low linear extension rates, low coral cover and/or no reef formation, thus providing natural laboratories to study coral communities with below average growth rates. Here we compare the annual linear extension rates over 10 years (range 1.2 to 11.4 mm yr-1 of six Porites sp. coral cores collected from Hong Kong with monthly hydrographic data from the Hong Kong Environmental Protection Department. At all sites, low-density, dry season extension were more variable than high-density, wet season extension and on average, was lower at two of the three sites. We applied multi-variate linear regressions that revealed high-density, wet season band extension to inversely correlate most significantly to temperature (r = -0.39, p<0.01. In contrast, low-density, dry season band extension was more variable and correlated most significantly with dry season chlorophyll-a (Chl-a (r = 0.64, p<0.001. Additionally, we find that corals at the site with highest dry season Chl-a have the highest dry season extension lengths. Our findings indicate that relative mixing of fresh and salt water in the wet season and primary productivity in the dry season, and their influences on aragonite saturation, are likely to impact interannual coral extension variability in marginal environments.

  2. Construction of a BioFluorescence Optical Particle Counter

    Science.gov (United States)

    Greaney, R.

    2009-04-01

    A bioaerosol fluorescence detection system is being constructed using an ellipsoid reflector based optical particle counter. The flux measuring device is to size submicron marine spray aerosol particles smaller than 100 nm in diameter. It will simultaneously non-destructively excite and detect fluorescence from organic matter contained in the aerosol. Chlorophyll-a is the primary fluorophor target, used as a marker for detecting phytoplankton (or derivatives thereof) in the particles. Particles have been sized to 167 nm in diameter and fluorescence detection testing is underway. The device will aid the quantification and identification of this organic material contained in marine spray aerosols, providing improved inputs into climate models and air quality assessments.

  3. Seasonal and Inter-Annual Analysis of Chlorophyll-a and Inherent Optical Properties from Satellite Observations in the Inner and Mid-Shelves of the South of Buenos Aires Province (Argentina

    Directory of Open Access Journals (Sweden)

    Ana L. Delgado

    2015-09-01

    Full Text Available The aim of this study is to describe and understand the seasonal and inter-annual physical and biological dynamics of the inner and mid shelves of the Southwestern Buenos Aires Province (Argentina. We used chlorophyll-a (chl-a concentrations and inherent optical properties (IOPs, derived from ocean color products between 2002 and 2010, as a proxy for the physical and biological parameters of interest. This study focuses on the absorption by phytoplankton, aph(443, particulate backscattering, bbp(443, and absorption due to dissolved and particulate detrital matter, adg(443, and chl-a derived from a multiband quasi-analytical algorithm (QAA. A regionalization based on the coefficient of variation and the Census X-11 method were applied to define regions and to analyze the inter-annual and seasonal variability of the ocean color parameters, with regards to climate variability. The coastal zone presents the highest values of chl-a with two maxima in winter and autumn, while the mid-shelf shows a strong spring chl-a maximum. After 2009, all parameters under study shifted their seasonality and their magnitude changed over the entire area. In the coastal zone, mean values of aph(443 and bbp(443 increased, while in the mid-shelf, chl-a and aph(443 decreased. The observed inter-annual and seasonal behavior of the parameters is tightly related to climate variability of the study area.

  4. Instrumental fundamental parameters and selected applications of the microfocus X-ray fluorescence analysis at a scanning electron microscope; Instrumentelle Fundamentalparameter und ausgewaehlte Anwendungen der Mikrofokus-Roentgenfluoreszenzanalyse am Rasterelektronenmikroskop

    Energy Technology Data Exchange (ETDEWEB)

    Rackwitz, Vanessa

    2012-05-30

    For a decade X-ray sources have been commercially available for the microfocus X-ray fluorescence analysis ({mu}-XRF) and offer the possibility of extending the analytics at a scanning electron microscope (SEM) with an attached energy dispersive X-ray spectrometer (EDS). By using the {mu}-XRF it is possible to determine the content of chemical elements in a microscopic sample volume in a quantitative, reference-free and non-destructive way. For the reference-free quantification with the XRF the Sherman equation is referred to. This equation deduces the intensity of the detected X-ray intensity of a fluorescence peak to the content of the element in the sample by means of fundamental parameters. The instrumental fundamental parameters of the {mu}-XRF at a SEM/EDS system are the excitation spectrum consisting of X-ray tube spectrum and the transmission of the X-ray optics, the geometry and the spectrometer efficiency. Based on a calibrated instrumentation the objectives of this work are the development of procedures for the characterization of all instrumental fundamental parameters as well as the evaluation and reduction of their measurement uncertainties: The algorithms known from the literature for the calculation of X-ray tube spectrum are evaluated with regard to their deviations in the spectral distribution. Within this work a novel semi-empirical model is improved with respect to its uncertainties and enhanced in the low energy range as well as extended for another three anodes. The emitted X-ray tube spectrum is calculated from the detected one, which is measured at an especially developed setup for the direct measurement of X-ray tube spectra. This emitted X-ray tube spectrum is compared to the one calculated on base of the model of this work. A procedure for the determination of the most important parameters of an X-ray semi-lens in parallelizing mode is developed. The temporal stability of the transmission of X-ray full lenses, which have been in regular

  5. Associations between chlorophyll a and various microcystin-LR health advisory concentrations [version 1; referees: 1 approved, 2 approved with reservations

    Directory of Open Access Journals (Sweden)

    Jeffrey W. Hollister

    2016-02-01

    Full Text Available Cyanobacteria harmful algal blooms (cHABs are associated with a wide range of adverse health effects that stem mostly from the presence of cyanotoxins. To help protect against these impacts, several health advisory levels have been set for some toxins. In particular, one of the more common toxins, microcystin-LR, has several advisory levels set for drinking water and recreational use. However, compared to other water quality measures, field measurements of microcystin-LR are not commonly available due to cost and advanced understanding required to interpret results. Addressing these issues will take time and resources. Thus, there is utility in finding indicators of microcystin-LR that are already widely available, can be estimated quickly and in situ, and used as a first defense against high concentrations of microcystin-LR. Chlorophyll a is commonly measured, can be estimated in situ, and has been shown to be positively associated with microcystin-LR. In this paper, we use this association to provide estimates of chlorophyll a concentrations that are indicative of a higher probability of exceeding select health advisory concentrations for microcystin-LR. Using the 2007 National Lakes Assessment and a conditional probability approach, we identify chlorophyll a concentrations that are more likely than not to be associated with an exceedance of a microcystin-LR health advisory level. We look at the recent US EPA health advisories for drinking water as well as the World Health Organization levels for drinking water and recreational use and identify a range of chlorophyll a thresholds. A 50% chance of exceeding one of the microcystin-LR advisory concentrations of 0.3, 1, 1.6, and 2 g/L is associated with chlorophyll a concentration thresholds of 23.4, 67.0, 83.5, and 105.8, respectively. When managing for these various microcystin-LR levels, exceeding these reported chlorophyll a concentrations should be a trigger for

  6. Remote sensing of vertical phytoplankton pigment distributions in the Baltic: new mathematical expressions. Part 1: Total chlorophyll a distribution

    Directory of Open Access Journals (Sweden)

    Jerzy Dera

    2007-12-01

    Full Text Available This article is the first in a series of three describing the modelling of the vertical different photosynthetic and photoprotecting phytoplankton pigments concentration distributions in the Baltic and their interrelationsdescribed by the so-called non-photosynthetic pigment factor.The model formulas yielded by this research are an integral part of the algorithms used in the remote sensingof the Baltic ecosystem. Algorithms of this kind have already been developed by our team from data relating mainly to oceanic Case 1 waters (WC1 and have produced good results for these waters. But their application to Baltic waters, i.e.,Case 2 waters, was not so successful. On the basis of empirical data for the Baltic Sea, we therefore derived new mathematical expressions for the spatial distribution of Baltic phytoplankton pigments. They are discussed in this series of articles. This first article presents a statistical model for determining the total concentration ofchlorophyll, a (i.e., the sum of chlorophylls a+pheo derived spectrophotometrically at different depths in the Baltic Sea Ca(z on the basis of its surface concentration Ca(0,which can be determined by remote sensing. This model accounts for the principal features of the vertical distributions of chlorophyll concentrations characteristic of the Baltic Sea. The model's precision was verified empirically: it was found suitable for application in the efficient monitoring of the Baltic Sea. The modified mathematical descriptions of the concentrations of accessory pigments (photosynthetic and photoprotecting in Baltic phytoplankton and selected relationships between them are given in the other two articles in this series (Majchrowski et al. 2007, Woźniak et al. 2007b, both in this volume.

  7. Chlorophyll-a Algorithms for Oligotrophic Oceans: A Novel Approach Based on Three-Band Reflectance Difference

    Science.gov (United States)

    Hu, Chuanmin; Lee, Zhongping; Franz, Bryan

    2011-01-01

    A new empirical algorithm is proposed to estimate surface chlorophyll-a concentrations (Chl) in the global ocean for Chl less than or equal to 0.25 milligrams per cubic meters (approximately 77% of the global ocean area). The algorithm is based on a color index (CI), defined as the difference between remote sensing reflectance (R(sub rs), sr(sup -1) in the green and a reference formed linearly between R(sub rs) in the blue and red. For low Chl waters, in situ data showed a tighter (and therefore better) relationship between CI and Chl than between traditional band-ratios and Chl, which was further validated using global data collected concurrently by ship-borne and SeaWiFS satellite instruments. Model simulations showed that for low Chl waters, compared with the band-ratio algorithm, the CI-based algorithm (CIA) was more tolerant to changes in chlorophyll-specific backscattering coefficient, and performed similarly for different relative contributions of non-phytoplankton absorption. Simulations using existing atmospheric correction approaches further demonstrated that the CIA was much less sensitive than band-ratio algorithms to various errors induced by instrument noise and imperfect atmospheric correction (including sun glint and whitecap corrections). Image and time-series analyses of SeaWiFS and MODIS/Aqua data also showed improved performance in terms of reduced image noise, more coherent spatial and temporal patterns, and consistency between the two sensors. The reduction in noise and other errors is particularly useful to improve the detection of various ocean features such as eddies. Preliminary tests over MERIS and CZCS data indicate that the new approach should be generally applicable to all existing and future ocean color instruments.

  8. Distributions of chlorophyll a and carbon fixed strength of phytoplankton in autumn of the southern Huanghai Sea waters

    Institute of Scientific and Technical Information of China (English)

    ZHENG Guoxia; SONG Jinming; DAI Jicui; WANG Yiming

    2006-01-01

    Chlorophyll a (Chl a) concentration and primary productivity (PP), namely, carbon fixed strength of phytoplankton along four transects in the southern Huanghai Sea (SHS) were studied for their distribution features and controlling mechanisms based on the investigations from 17 October to 3 November 2005. The Chl a concentration in the study waters dynamically changed spatially.Surface Chl a concentrations ranged from 0.11 to 2.38 mg/m3 with higher and lower values observed in the nutrient-laden inshore waters and central part of the SHS occupied by oligotrophic current, respectively. The vertical distribution of Chl a concentration showed a predominant pattern of subsurface concentration maximum profile. It followed the previous result of the deep dissolved oxygen concentration maximum profile, which was significantly correlated with phytoplankton and regional water mass. The primapecially phosphate concentration in seawater and hydrological condition. Furthermore, associating the present study results together with previous studies, the annual value of carbon fixed production of phytoplankton in the entire marginal seas of East China(including the Bohai Sea, the Huanghai Sea and the East China Sea) was estimated to be 222 Mt, which accounted for 2% of that in the global margins. Besides, it was as 16.2 times as the annual value of apparent carbon sink strength ( 13.96 Mt) in the marginal seas of East China. This multiple was different in different sea areas (3.0 in the Bohai Sea, 6.7 in the Huanghai Sea and 81.6 in the East China Sea).

  9. A multi-band semi-analytical algorithm for estimating chlorophyll-a concentration in the Yellow River Estuary, China.

    Science.gov (United States)

    Chen, Jun; Quan, Wenting; Cui, Tingwei

    2015-01-01

    In this study, two sample semi-analytical algorithms and one new unified multi-band semi-analytical algorithm (UMSA) for estimating chlorophyll-a (Chla) concentration were constructed by specifying optimal wavelengths. The three sample semi-analytical algorithms, including the three-band semi-analytical algorithm (TSA), four-band semi-analytical algorithm (FSA), and UMSA algorithm, were calibrated and validated by the dataset collected in the Yellow River Estuary between September 1 and 10, 2009. By comparing of the accuracy of assessment of TSA, FSA, and UMSA algorithms, it was found that the UMSA algorithm had a superior performance in comparison with the two other algorithms, TSA and FSA. Using the UMSA algorithm in retrieving Chla concentration in the Yellow River Estuary decreased by 25.54% NRMSE (normalized root mean square error) when compared with the FSA algorithm, and 29.66% NRMSE in comparison with the TSA algorithm. These are very significant improvements upon previous methods. Additionally, the study revealed that the TSA and FSA algorithms are merely more specific forms of the UMSA algorithm. Owing to the special form of the UMSA algorithm, if the same bands were used for both the TSA and UMSA algorithms or FSA and UMSA algorithms, the UMSA algorithm would theoretically produce superior results in comparison with the TSA and FSA algorithms. Thus, good results may also be produced if the UMSA algorithm were to be applied for predicting Chla concentration for datasets of Gitelson et al. (2008) and Le et al. (2009).

  10. Remote Estimation of Chlorophyll-a in Inland Waters by a NIR-Red-Based Algorithm: Validation in Asian Lakes

    Directory of Open Access Journals (Sweden)

    Gongliang Yu

    2014-04-01

    Full Text Available Satellite remote sensing is a highly useful tool for monitoring chlorophyll-a concentration (Chl-a in water bodies. Remote sensing algorithms based on near-infrared-red (NIR-red wavelengths have demonstrated great potential for retrieving Chl-a in inland waters. This study tested the performance of a recently developed NIR-red based algorithm, SAMO-LUT (Semi-Analytical Model Optimizing and Look-Up Tables, using an extensive dataset collected from five Asian lakes. Results demonstrated that Chl-a retrieved by the SAMO-LUT algorithm was strongly correlated with measured Chl-a (R2 = 0.94, and the root-mean-square error (RMSE and normalized root-mean-square error (NRMS were 8.9 mg∙m−3 and 72.6%, respectively. However, the SAMO-LUT algorithm yielded large errors for sites where Chl-a was less than 10 mg∙m−3 (RMSE = 1.8 mg∙m−3 and NRMS = 217.9%. This was because differences in water-leaving radiances at the NIR-red wavelengths (i.e., 665 nm, 705 nm and 754 nm used in the SAMO-LUT were too small due to low concentrations of water constituents. Using a blue-green algorithm (OC4E instead of the SAMO-LUT for the waters with low constituent concentrations would have reduced the RMSE and NRMS to 1.0 mg∙m−3 and 16.0%, respectively. This indicates (1 the NIR-red algorithm does not work well when water constituent concentrations are relatively low; (2 different algorithms should be used in light of water constituent concentration; and thus (3 it is necessary to develop a classification method for selecting the appropriate algorithm.

  11. Atlantic advection driven changes in glacial meltwater: Effects on phytoplankton chlorophyll-a and taxonomic composition in Kongsfjorden, Spitsbergen.

    Directory of Open Access Journals (Sweden)

    Willem Hendrik Van De Poll

    2016-10-01

    Full Text Available Phytoplankton biomass and composition was investigated in a high Arctic fjord (Kongsfjorden, 79˚N, 11˚40’E using year round weekly pigment samples collected from October 2013 to December 2014. In addition, phytoplankton dynamics supplemented with physical and chemical characteristics of the 2014 spring bloom (April –June 2014 were assessed in two locations in Kongsfjorden. The goal was to elucidate effects of Atlantic advection on spatial phytoplankton chlorophyll-a (chl-a and taxonomic composition. Chl-a declined during the polar night to a minimum of 0.01 mg m-3, followed by a 1000-fold increase until May 28. Atlantic advection prevented sea ice formation and increased springtime melting of marine terminating glaciers. This coincided with spatial and temporal differences in abundances of flagellates (prasinophytes, haptophytes, cryptophytes, and chrysophytes and diatoms in early spring. More flagellated phytoplankton were observed in the non-stratified central Kongsfjorden, whereas diatoms were more abundant in the stratified inner fjord. Contrasting conditions between locations were reduced when glacial melt water stratification expanded towards the mouth of the fjord, mediating a diatom dominated surface bloom at both locations. We suggest that glacial melt water governs spring bloom spatial timing and composition in the absence of sea ice driven stratification. The spring bloom exhausted surface nutrient concentrations by the end of May. The nutrient limited post bloom period (June-October was characterized by reduced biomass and pigments of flagellated phytoplankton, consisting of prasinophytes, haptophytes, chrysophytes and to a lesser extent cryptophytes and peridinin-containing dinoflagellates.

  12. Evaluating bio-optical models to determine chlorophyll a from hyper spectral data in the turbid coastal waters of South Carolina

    Science.gov (United States)

    Hames, J. B.; Ali, K.

    2013-12-01

    Millions of people visit the beaches of South Carolina every year and the increasing utilization of the coastal waters is leading to the deterioration of water quality and the marine ecosystem. Ecological stress on these environments is reflected by the increase in the frequency and severity of Harmful Algal Blooms (HABs). This was evident during recent summer seasons particularly in the shallow nearshore waters of Long Bay, South Carolina, an open coast embayment on the South Atlantic Bight. These aspects threaten human and marine life. The early detection of HABs in the coastal waters requires more efficient and accurate monitoring tools. Remote sensing provides synoptic view of the entire Long Bay waters at high temporal coverage and allows resource managers to effectively map and monitor algal bloom development, near real time. Various remote sensing (RS) algorithms have been developed but were mostly calibrated to low resolution global data and or other specific sites. In the summer of 2013, a suite of measurements and water samples were collected from 15 locations along the nearshore waters of Long Bay using the Grice Laboratory R/V. In this study, we evaluate the efficiency of 10 bio-optical blue-green and NIR-red based RS models applied to GER 1500 hyper spectral reflectance data to predict chlorophyll a, a proxy for phytoplankton density, in the Long Bay waters of SC. Efficiency of the algorithms performance in the study site were tested through a least squares regression and residual analysis. Results show that among the selected suite of algorithms the blue green models by Darecki and Stramski (2004) produced R2 of 0.68 with RMSE=0.39μg/l, Oc4v4 model by O'Reilly et al. (2000) gave R2 of 0.62 with RMSE=0.73ug/l, and the Oc2v4 also by O'Reilly et al (2000) gave R2 of 0.69 with RMSE=0.65. Among the NIR-red models, Moses et al (2009) two-band algorithm produced R2 of 0.75 and RMSE=1.79, and the three-band version generated R2 of 0.81 and RMSE=2.25ug

  13. Solvent effect on absorption and fluorescence spectra of three biologically active carboxamides (C1, C2 and C3). Estimation of ground and excited state dipole moment from solvatochromic method using solvent polarity parameters.

    Science.gov (United States)

    Patil, N R; Melavanki, R M; Kapatkar, S B; Ayachit, N H; Saravanan, J

    2011-05-01

    The absorption and fluorescence spectra of three Carboxamides namely (E)-2-(4-Chlorobenzylideneamino)-N-(2-chlorophenyl)-4,5,6,7-tetrahydrobenzo[b]thiophene-3-carboxamide (C(1)), (E)-N-(3-Chlorophenyl)-2-(3, 4-dimethoxybenzylideneamino)-4,5,6,7-tetrahydrobenzo[b]thiophene-3-carboxamide (C(2)) and (E)-N-(3-Chlorophenyl)-2-(3,4,5-trimethoxybenzylideneamino)-4,5,6,7-tetrahydrobenzo[b]thiophene-3-carboxamide (C(3)) have been recorded at room temperature in solvents of different polarities using dielectric constant (ε) and refractive index (n). Experimental ground (μ(g)) and excited (μ(e)) state dipole moments are estimated by means of solvatochromic shift method and also the excited dipole moments are estimated in combination with ground state dipole moments. It was estimated that dipole moments of the excited state were higher than those of the ground state of all three molecules. Further, the changes in dipole moment (Δμ) were calculated both from solvatochromic shift method and on the basis of microscopic empirical solvent polarity parameter (E(N)(T)) and the values are compared.

  14. Fluorescent microspheres

    Science.gov (United States)

    Rembaum, A.

    1978-01-01

    Latex particles with attached antibodies have potential biochemical and environmental applications. Human red blood cells and lymphocytes have been labeled with fluorescent microspheres by either direct or indirect immunological technique. Immunolatex spheres can also be used for detecting and localizing specific cell surface receptors. Hormones and toxins may also be bondable.

  15. 高温胁迫对水稻剑叶光合和叶绿素荧光特征的影响%Effects of high temperature stress on the flag leaf photosynthesis and chlorophyll fluorescence parameters of rice

    Institute of Scientific and Technical Information of China (English)

    杜尧东; 李键陵; 王华; 唐湘如; 胡飞

    2012-01-01

    Super hybrid rice variety Tianyou 998 was pot-cultured in climate chambers to study the characteristics of its flag leaf photosynthesis and chlorophyll fluorescence parameters at four growth stages ( heading, milking, wax-maturing, and full maturing) under high temperature stress. Five high temperature treatments were installed. The maximum temperature was installed at 32, 35 , 38 , 40, and 42 ℃ , respectively, with a 6 ℃ difference per day, and each treatment was lasted for 5 days, 2 hours per day, and taking the natural condition as the control (CK). High temperature had obvious effects on the characteristics of the flag leaf photosynthesis and chlorophyll fluorescence parameters, and the effects differed with the high temperature treatments, rice development stages, and test items. The higher the temperature, the greater the effects were. After treated with high temperature, the test items such as chlorophyll content (SPAD) , net photosynthetic rate ( Pn) , stomatal conductance ( Gs) , efficiency of PSII photochemistry ( Fv/Fm ) , actual quantum yield ( φPSII ) , apparent photosynthetic electron transport rate ( ETR) , photochemical quenching coefficient (qP) , and photochemical reaction ( P) decreased, while the intercellular CO2 concentration ( C;) , initial fluorescence (F o) , non-photo- chemical quenching coefficient (qN) , and other heat dissipation (E) increased. Most of the photosynthetic and chlorophyll fluorescence parameters at the four growth stages changed significantly when the maximum temperature was above 35 ℃ , and decreased greatly when the maximum temperature was above 38 X.. At heading and milking stages, the Pn and Gs had a significant decrease while the Ci had a significant increase; at wax- and full maturing stages, the SPAD decreased significantly. The decrement of the Fv/Fm and the decrement of the FO were greater at heading and milking stages than at wax- and full maturing stages. High temperature stress had greater effects on

  16. Response of Water Stress on Chlorophyll Fluorescence Parameters of Tomato Seedlings%番茄幼苗叶绿素荧光参数对水分胁迫的响应

    Institute of Scientific and Technical Information of China (English)

    须晖; 高洁; 王蕊; 李天来; 马健; 刘满昌

    2011-01-01

    To study the response of tomato seedlings to water stress, the effect on chlorophyll fluorescence properties and chlorophyll content and the relative leaf water content. The results suggested that water stress lead to the maximum quantum efficiency of PSII photochemistry (Fv/Fm), the photochemical quenching (qL)and the linear electron transport rate (ETR) decreased gradually. In contrast, the non photochemical quenching (NPQ) rose gradually. Chlorophyll fluorescence parameters had dash jump phenomena on moderate water stress (the fourth day). Results showed a high correlation (-0.83*) between the decreasing of soil water content (SWC)and NPQ. Hence, NPQ can be an indicator as a guide for irrigation. When NPQ was 2.095, SWC was lower than 32.1%, tomato seedlings were affect on water stress and should be irrigation timely.%以5叶1心期番茄品种‘辽园多丽'为试材,研究番茄幼苗叶绿素荧光特性、叶绿素含量以及叶片相对含水量对水分胁迫的生理响应.结果表明,水分胁迫导致叶绿素荧光参数Fy/Fm、qL、ETR下降,NPQ上升;在轻度水分胁迫下,叶绿素荧光各参数值均有突跃现象.在整个水分胁迫过程中番茄幼苗叶片相对含水量及叶绿素含量均呈下降趋势.NPQ与基质含水量的变化密切相关,相关系数为-0.83',表明荧光参数NPQ可以作为指导灌溉的一个指标.当NPO为2.0975时,基质含水量降到31.2%,番茄幼苗生长受到水分胁迫的影响,应及时灌溉.

  17. Nucleus-encoded light-harvesting chlorophyll a/b proteins are imported normally into chlorophyll b-free chloroplasts of Arabidopsis.

    Science.gov (United States)

    Nick, Sabine; Meurer, Jörg; Soll, Jürgen; Ankele, Elisabeth

    2013-05-01

    Chloroplast-located proteins which are encoded by the nuclear genome have to be imported from the cytosol into the organelle in a posttranslational manner. Among these nuclear-encoded chloroplast proteins are the light-harvesting chlorophyll a/b-binding proteins (LHCPs). After translation in the cytosol, precursor proteins of LHCPs are imported via the TOC/TIC translocase, processed to their mature size to insert into thylakoid membranes where they recruit chlorophylls a and b to form pigment-protein complexes. The translocation of proteins is a highly regulated process which employs several regulators. To analyze whether CAO (chlorophyll a oxigenase) which converts chlorophyll a to chlorophyll b at the inner chloroplast membrane, is one of these regulators, we performed import reactions utilizing a homozygous loss-of-function mutant (cao-1). We imported in vitro translated and (35)S-labeled precursor proteins of light-harvesting proteins of photosystem II LHCB1, LHCB4, and LHCB5 into chloroplasts isolated from cao-1 and show that import of precursor proteins and their processing to mature forms are not impaired in the mutant. Therefore, regulation of the import machinery cannot be responsible for the decreased steady-state levels of light-harvesting complex (LHC) proteins. Regulation does not take place at the transcriptional level either, because Lhcb mRNAs are not down-regulated. Additionally, reduced steady-state levels of LHCPs also do not occur due to posttranslational turnover of non-functional LHCPs in chloroplasts. Taken together, our data show that plants in the absence of CAO and therefore devoid of chlorophyll b are not influenced in their import behavior of LHC proteins.

  18. Ab initio calculation of UV-absorption spectra of chlorophyll a: Comparison study between RHF/CIS, TDDFT, and semi-empirical methods

    CERN Document Server

    Suendo, Veinardi

    2011-01-01

    Chlorophyll a is one the most abundant pigment on Earth, which is responsible for trapping the light energy to perform the photosynthesis process in green plants. This molecule is a metal-complex compound that consists of a porphyrins ring with high symmetry that acts as ligands with magnesium as the central ion. Chlorophyll a has been studied for many years from different point of views for both experimental and theoretical interests. In this study, the restricted Hartree-Fock configuration interaction single (RHF/CIS), time-dependent density functional theory (TDDFT) and some semi-empirical methods (CNDO/s and ZINDO) calculations were carried out and compared to reconstruct the UV-Vis absorption spectra of chlorophyll a. In some extend, the calculation results based on a single molecule calculation were succeeded to reconstruct the absorption spectra but required to be scaling and broaden to match the experimental one. Different computational methods (ab initio and semi-empirical) exhibits the differences i...

  19. Variability of mesozooplankton biomass and individual size in a coast-offshore transect in the Catalan Sea: relationships with chlorophyll a and hydrographic features

    KAUST Repository

    Alcaraz, Miquel

    2016-10-11

    The temporal and spatial changes of zooplankton and chlorophyll a concentration were studied during the warm stratification period (early June) at three stations whose traits corresponded to the coastal, frontal, and offshore-dome water conditions described for the Catalan Sea. We sampled the stations for 12 days at a frequency ranging from less than 10 to 102 h, with a spatial resolution ranging from 10 to 104 m. The objective was to determine the variability of mesozooplankton and phytoplankton (chlorophyll a) biomass, and average individual size (mass) across a coast-offshore transect in relation to the stratification conditions prevailing in the NW Mediterranean during summer. The vertical distribution of phytoplankton biomass displayed a clear deep maximum at 60 m depth except at the coastal station. This maximum exists during most of the year and is especially important during the density stratification period. It was accompanied during daylight hours by a coherent zooplankton maximum. At sunset mesozooplankton ascended and dispersed, with larger organisms from deeper layers joining the migrating community and increasing the average individual mass. The highest variability of mesozooplankton biomass, individual mass and chlorophyll a concentration occurred at the front station due to the coupling between the vertical migration of zooplankton and the particular characteristics of the front. According to the data shown, the highest variability was observed at the lowest scales.

  20. Analysis of factors affecting the ratio of microcystin to chlorophyll-a in cyanobacterial blooms using real-time polymerase chain reaction.

    Science.gov (United States)

    Ha, Joo H; Hidaka, Taira; Tsuno, Hiroshi

    2011-02-01

    Chlorophyll-a concentration has been used as an indicator to estimate microcystin levels in water bodies. This study examined the microcystin to chlorophyll-a ratio in a fishpond in Japan. The ratio varied spatially and temporally during the six-month field survey, which is consistent with reports by other researchers. We investigated the causes of the variability of the ratio by quantifying microcystin synthetase (mcy) A gene with real-time PCR, so as to observe the growth of microcystin-producing cyanobacteria and Microcystis strains in natural cyanobacterial blooms. The application of real-time PCR enabled corroboration of the relationship between the toxigenicity and the toxicity of the blooms. The microcystin to chlorophyll-a ratio was influenced by the combined effects of the durability of the toxic bloom, and the quantity of microcystin-producing cyanobacteria carrying the mcy A gene, especially toxic Microcystis strains. Cyanobacterial blooms produced more microcystin when high concentrations of microcystin-producing Microcystis aggregated in a stationary state with low growth rates. The variable toxicity of blooms needs to be reflected in accurate and efficient alert systems for toxic cyanobacteria and cyanotoxins.

  1. Retrieval of Chlorophyll a Concentration with Multi-sensor Data by GSM01 Merging Algorithm%基于GSM01融合的多传感器数据叶绿素a浓度反演

    Institute of Scientific and Technical Information of China (English)

    陈芸芝; 郑高强; 汪小钦; 陈曦

    2013-01-01

    叶绿素a浓度是水质状况评价的一个重要指标,而遥感是大面积反演叶绿素a浓度的重要手段。由于采用基于经验模型的标准算法对二类水体叶绿素a浓度的反演值往往偏高,因此本文基于半分析模型GSM01(Garver-Siegel-Maritorena-01),在对模型参数进行调节的基础上,对东海2008年5月11日Aqua MODIS、Terra MODIS、Sea-WiFS 3种传感器各波段遥感反射率进行融合,来反演叶绿素a浓度,并将反演结果与自适应加权平均算法获得的叶绿素a浓度数据进行对比。结果表明,基于GSM01融合的多传感器叶绿素a浓度反演,拥有4个优势:(1) GSM01模型反演叶绿素a浓度值范围更符合实测结果,由于该模型考虑水体各组分的散射吸收特性对光谱反射率的影响,避免因高浓度悬浮物质影响造成的近岸水体叶绿素a浓度过高问题;(2)通过融合多传感器反射率数据,用于叶绿素a浓度反演的波段从6个增至18个,光谱信息变丰富,模型求解的自由度提高,叶绿素a浓度反演的精度提高。模型通过误差最小化准则,将不同传感器反演的差异降至最小,保证反演结果的空间连续性;(3)与自适应加权平均采用的融合策略不同,GSM01模型直接利用各传感器遥感反射率数据进行融合而不是针对叶绿素a浓度数据进行融合,避免了误差的传递;(4)GSM01模型可自由组合输入的反射率数据,具有更强的灵活性。%Chlorophyll a concentration, which can be routinely measured by ocean color remote sensing at large scale, is one of the most important indicators to evaluate water quality. The standard inversion algorithms based on empirical model, however, often overestimate chlorophyll a concentration in caseⅡwaters. After tuning key parameters of a typical semi-analytical model called GSM01 (Garver-Siegel-Maritorena-01), multi-sensor reflec-tance data of East

  2. Variability of chlorophyll-a concentration in the Gulf of Guinea and its relation to physical oceanographic variables

    Science.gov (United States)

    Nieto, Karen; Mélin, Frédéric

    2017-02-01

    The Gulf of Guinea represents a wide tract of the African coast with complex and rich coastal ecosystems undergoing various pressures. The seasonal variations of chlorophyll-a concentration (Chla) along the Gulf of Guinea (GoG) and their relations with physical oceanographic variables were analyzed using satellite observations covering the period 2002-2012. The effects of sea surface temperature (SST), sea level anomalies (SLA), winds, geostrophic currents, eddy kinetic energy (EKE), mesoscale eddies and fronts were considered on a monthly time scale. The analysis for each unit area was carried out on a chlorophyll index (IChla) computed as the product of the mean distance from the coast to the eutrophic threshold (1 mg m-3 isoline) and the average Chla in the eutrophic area. The study, based on satellite-derived Chla, was allowed by the unprecedented coverage given by the products distributed by the ESA Ocean Colour Climate Change Initiative (OC_CCI) resulting from the merging of data from several satellite missions. The physical variables served as potential predictors in a statistical Boosted Regression Tree (BRT) model. To account for the heterogeneous nature of the GoG, the analysis was conducted on eight systems that made up a partition of the whole region defined on the basis of the BRT model results and climatological properties. The western-most domain, from Guinea-Bissau to Sierra Leone, was associated with upwelling properties in boreal winter and appeared to share some characteristics with the overall Northwest African upwelling system. The region of Ivory Coast and Ghana also had upwelling properties but the main upwelling season was in boreal summer. In general upwelling conditions with cold SST, negative SLA, fairly strong frontal activity, and moderate winds, appeared as the environmental window most favorable to high IChla values. For these systems, the BRT model fitted the IChla data well with a percentage of explained total deviance D2 between 70

  3. Optimize parameters of hydride generation-atomic fluorescence spectrometry for inorganic arsenic determination in grain%氢化物发生-原子荧光法测定粮食中无机砷条件的研究

    Institute of Scientific and Technical Information of China (English)

    杨庆惠

    2012-01-01

    应用氢化物发生—原子荧光分析技术进行粮食中无机砷测定的研究,通过优化酸度、硼氢化钾、载气流量、灯电流以及原子化器高度等分析条件,结果表明,砷浓度在0~30 ng/ml内呈线性关系,相关系数为0.999 9,相对标准偏差为1.6%,检出限为0.054 μg/L,用此方法测定粮食中无机砷,回收率为96.5%~103.5%.该方法简便、快速、灵敏,在实际样品测定中获得到了满意的结果,便于推广应用.%Hydride generation- atomic fluorescence spectrometry was adopted for determine the inorganic arsenic in grain. The experimental parameters such as Ph, KHB4 concentration, flow rate, lamp current and the height of atomizer were optimized. There is linear relation when the arsenic concentration was between 0~30 ng/ml with a correlation coefficient of 0. 999 9. The relative standard deviation was 1. 6%, and the detection limit was 0. 054μg/L. The recovery rate reached to 96. 5%~103. 5%. This method is simple,rapid and sensitive, and got satisfactory results in practicle,it is worth for generalize.

  4. Wide field-of-view fluorescence imaging of coral reefs.

    Science.gov (United States)

    Treibitz, Tali; Neal, Benjamin P; Kline, David I; Beijbom, Oscar; Roberts, Paul L D; Mitchell, B Greg; Kriegman, David

    2015-01-13

    Coral reefs globally are declining rapidly because of both local and global stressors. Improved monitoring tools are urgently needed to understand the changes that are occurring at appropriate temporal and spatial scales. Coral fluorescence imaging tools have the potential to improve both ecological and physiological assessments. Although fluorescence imaging is regularly used for laboratory studies of corals, it has not yet been used for large-scale in situ assessments. Current obstacles to effective underwater fluorescence surveying include limited field-of-view due to low camera sensitivity, the need for nighttime deployment because of ambient light contamination, and the need for custom multispectral narrow band imaging systems to separate the signal into meaningful fluorescence bands. Here we describe the Fluorescence Imaging System (FluorIS), based on a consumer camera modified for greatly increased sensitivity to chlorophyll-a fluorescence, and we show high spectral correlation between acquired images and in situ spectrometer measurements. This system greatly facilitates underwater wide field-of-view fluorophore surveying during both night and day, and potentially enables improvements in semi-automated segmentation of live corals in coral reef photographs and juvenile coral surveys.

  5. Muti-model Collaborative Retrieval of Chlorophyll a in Taihu Lake Based on Data Assimilation%基于数据同化的太湖叶绿素多模型协同反演

    Institute of Scientific and Technical Information of China (English)

    李渊; 李云梅; 吕恒; 朱利; 吴传庆; 杜成功; 王帅

    2014-01-01

    Under the efforts of many scholars, large amount of remote retrieval models of water quality parameters have been developed. However, each model could only reflect the“true value” from one level because of the natural limitation of remote sensing. To get the relatively true value by combining various retrieval models, in this work, we developed a multi-model collaborative retrieval algorithm for retrieving the concentration of Chlorophyll a based on data assimilation. We measured water quality parameters and water reflectance spectra in Taihu Lake during 2006 to 2009. There were seven retrieve models established and six models were selected to participate in the multi-model collaborative retrieval algorithm. Then these selected models were combined to establish a multi-model for retrieving the concentration of Chlorophyll a. The results indicated:① the accuracy of multi-model retrieval algorithm was better than that of single-model retrieval method, with an optimal MAPE of only 22. 4℅; ② with more models participating in the multi-model collaborative retrieval algorithm, the accuracy became better, the average MAPE was decreased from 25. 6℅ to 23. 4℅, the average RMSE was decreased from 15. 082 μg•L-1 to 14. 575 μg•L-1 , and the average correlation coefficient was improved from 0. 91 to 0. 92;③ the accuracy and errors of retrieval products could be effective evaluated through calculating the confidence interval, which makes possible the acquirement of spatial and temporal error distribution of Chlorophyll a concentration retrieval in Taihu Lake.%在国内外众多学者的不懈努力下,开发了大量的水质参数遥感估算反演模型,但不同的模型都具有其“局限性”,只能从某个层面反映“真值”.基于上述考虑,本研究发展了基于数据同化方法的太湖叶绿素a浓度多模型协同反演算法.利用2006~2009年太湖野外实测水体高光谱遥感反射率数据,构建了7个叶绿素a浓度反

  6. Instantaneous transport of salt, nutrients, suspended matter and chlorophyll-a in the tropical estuarine system of Santos

    Directory of Open Access Journals (Sweden)

    Gleyci A. O. Moser

    2005-12-01

    Full Text Available The contribution of the polluted São Vicente and Santos estuarine channels to the eutrophication of Santos bay was assessed through the quantification of instantaneous transport of salt, dissolved inorganic nitrogen (DIN and phosphate, organic and inorganic matter (OSM and ISM and chlorophyll-a (Chl-a, during dry (austral winter- August/ 1999 and rainy (austral summer- January/2000 seasons. Samplings were carried out during spring and neap tides, in flood and ebb phases, in two transversal sections at the mouths of the São Vicente and Santos channels. Instantaneous transport values generally indicated importation of salt to the estuarine channels, exportation of DIN to the bay, mainly as N-NH4, at a maximum rate of 1155.1 g s-1 during the rainy season; importation of phosphate during the dry season (maximum of 385 g s-1 and exportation of ISM, OSM and Chl-a during periods of greater freshwater discharge. These results demonstrate the great contribution made by the Santos and São Vicente estuaries to the eutrophication of Santos bay, especially in the rainy season.A contribuição dos canais estuarinos de Santos e São Vicente para a eutrofização da baía de Santos foi avaliada quantificando-se o transporte instantâneo de sal, fosfato e nitrogênio inorgânico dissolvido (NID, material em suspensão orgânico (MSO e inorgânico (MSI e clorofila-a, durante a estação seca (inverno austral- Agosto/1999 e chuvosa (verão austral- Janeiro/ 2000. As amostragens foram realizadas em períodos de sizígia e quadratura, durante as marés enchentes e vazantes, nas secções transversais das bocas dos canais de São Vicente e Santos. Os valores de transporte instantâneo obtidos durante o período de amostragem indicaram exportação de NID, principalmente sobre a forma de N-NH4 (valor máximo de 1155,1 g s-1 na estação chuvosa; importação de fosfato durante a estação seca (máximo de 385,6 g s-1 e exportação de MSI, MSO e clorofila-a em per

  7. Chlorophyll a and Other Data from NOAA Ship ALBATROSS IV and other platforms as part of the Marine Resources Monitoring, Assessment and Prediction (MARMAP) project from 1977-03-16 to 1985-06-04 (NODC Accession 9800126)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Chlorophyll a and other data were collected from NOAA Ship ALBATROSS IV and other platforms from 16 March 1977 to 04 June 1985. Data were collected by the University...

  8. Chlorophyll A, hydrostatic pressure, and water density measurements collected from New Horizon in Gulf of California and North Pacific Ocean from 2004-07-14 to 2008-08-06. (NCEI Accession 0130065)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Extracted chlorophyll A, normalized to filtered volume, from suspended particulate material collected via Niskin bottle from the Gulf of California in the summers of...

  9. Comparison on Photosynthetic Characteristics and Chlorophyll Fluorescence Parameters between Thuja sutchuenensis and Platycladus orientalis%崖柏与侧柏光合特性和叶绿素光参数的比较研究

    Institute of Scientific and Technical Information of China (English)

    刘建锋; 杨文娟; 史胜青; 郭泉水; 江泽平

    2011-01-01

    The paper focused on the ecological adaptability of an endemic and endangered species, Thuja sutchuenensis , by detecting the difference of the photosynthetic characteristic,gas exchange and chlorophyll fluorescence parameters from its related widespread species, Platycladus orientalis. The results showed thati(l)For the light response parameters,the apparent quantum efficiency (a) of T. Sutchuenensis and P. Orientalis were not significantly different,and were 0. 039 mol · mol-1 photons and 0. 027 mol · mol-1 photons?respectively. However,the light compensation point (LCP) of T. Sutchuenensis (81. 04 jLtmol · m-1 ? A-1) was significantly higher than that of P. Orientalis (59. 72 μmol · m -2 · s-1 )(PpsⅡ ) and non-photochemical quenching (NPQ) were not significantly different in the two species. However, the photochemical quenching (PQ) of T. Sutchuenensis was significantly lower than that of P. Orientalis, which were 0. 218 and 0. 322, respectively. The above results showed that, the photosynthesis and chlorophyll fluorescence parameters of T. Sutchuenensis exhibited greater similarity with P. Orientalis, which indicated T. Sutchuenensis had a strong adaptability to the northern environment during the growing season.%以盆栽的中国特有濒危植物崖柏及其近缘广布种侧柏幼苗为材料,测定了二者的光照和二氧化碳响应特征参数、光合作用气体交换参数和叶绿素荧光参数,比较分析两者间差异并探讨崖柏异地保存的可行性.结果显示:(1)在光响应参数方面,崖柏和侧柏的表观量子效率分别为0.039和0.027 mol·mol-1,但二者差异不显著;崖柏的光补偿点(81,04 μmol·m-2·s-1)显著高于侧柏(59.72 μmol·m-2·s-1),但二者的最大净光合速率(Pmax)、光饱和点(LSP)和暗呼吸速率(Rd)均无显著差异;崖柏的CO2补偿点(129.17fmol·mol-1)显著高于侧柏(95.86μmol·mol-1),而光呼吸速率则崖柏略高于侧柏,但二者的羧化效率相当.(2)气

  10. Satellite remote sensing of chlorophyll a concentration in the north Pacific Fishery%卫星遥感北太平洋渔场叶绿素a浓度

    Institute of Scientific and Technical Information of China (English)

    毛志华; 朱乾坤; 龚芳

    2005-01-01

    Chlorophyll a concentration (Chla.) is a key to understand global biogeochemical cycles and to estimate ocean primary production which is the index of the fish food. The ocean regions with high Chla. provide the food condition of the convergence of the fish to become the candidate of the fishery centers. Chla. mainly decides the ocean optical properties in Case 1 waters and the satellite can measure the ocean radiances which are in a good relationship with Chla.. It has been proved that the ocean color satellites can really measure the Chla. of the ocean on the global scale. The Chla. distribution images are produced from satellite data and the accuracy of Chla. depends on inversion algorithms. The algorithms based on blue-green bands ratio are suitable to be used as operational algorithms to retrieve Chla. from the normalized water-leaving radiances for Case 1 waters. Two inversion models of Chla. are established on thousands of global in situ measurement data. The average relative errors of the Chla. retrievals of the two models are 36.4% and 38.5% respectively. Many factors can affect the accuracy of Chla. retrievals, including the conditions of atmosphere, ocean and instruments. Since the blue-green ratio algorithms are the localized algorithms which are based on a large amount of in situ measurements, a lot of measurements should be taken in the north Pacific Fishery regions to improve the accuracy of the algorithms. The algorithms are seriously affected by the in situ data, both the ocean optical parameters and the Chla. should be carefully measured with some nice instruments. A Chla. distribution map was generated from a month of Sea-Viewing Wide Field-of-View Sensor (SeaWiFS) data by the fusion techniques. The average of satellite-measured Chla. is 0.192 mg·m-3 in the whole north Pacific Fishery which is higher than ship-measured value with the average of 0.13 mg·m-3. The difference is mainly caused by th edifferent regions for the satellite measures of

  11. Herbicidal effects of harmaline from Peganum harmala on photosynthesis of Chlorella pyrenoidosa: probed by chlorophyll fluorescence and thermoluminescence.

    Science.gov (United States)

    Deng, Chunnuan; Shao, Hua; Pan, Xiangliang; Wang, Shuzhi; Zhang, Daoyong

    2014-10-01

    The herbicidal effects of harmaline extracted from Peganum harmala seed on cell growth and photosynthesis of green algae Chlorella pyrenoidosa were investigated using chlorophyll a fluorescence and thermoluminescence techniques. Exposure to harmaline inhibited cell growth, pigments contents and oxygen evolution of C. pyrenoidosa. Oxygen evolution was more sensitive to harmaline toxicity than cell growth or the whole photosystem II (PSII) activity, maybe it was the first target site of harmaline. The JIP-test parameters showed that harmaline inhibited the donor side of PSII. Harmaline decreased photochemical efficiency and electron transport flow of PSII but increased the energy dissipation. The charge recombination was also affected by harmaline. Amplitude of the fast phase decreased and the slow phase increased at the highest level of harmaline. Electron transfer from QA(-) to QB was inhibited and backward electron transport flow from QA(-) to oxygen evolution complex was enhanced at 10 μg mL(-1) harmaline. Exposure to 10 μg mL(-1) harmaline caused appearance of C band in thermoluminescence. Exposure to 5 μg mL(-1) harmaline inhibited the formation of proton gradient. The highest concentration of harmaline treatment inhibited S3QB(-) charge recombination but promoted formation of QA(-)YD(+) charge pairs. P. harmala harmaline may be a promising herbicide because of its inhibition of cell growth, pigments synthesis, oxygen evolution and PSII activities.

  12. 不同干旱胁迫下欧李光合及叶绿素荧光参数的响应%Response of Photosynthesis and Chlorophy Ⅱ Fluorescence Parameters to Different Drought Stress in Cerasus humilis Bunge.

    Institute of Scientific and Technical Information of China (English)

    尹赜鹏; 刘雪梅; 商志伟; 任静; 宋兴舜

    2011-01-01

    采用人为控制土壤含水量的方法对欧李进行轻度和重度干旱的处理,测定叶片的气体交换和叶绿素荧光参数的日变化.结果表明,干旱胁迫下欧李叶片净光合速率、蒸腾速率、水分利用效率、气孔导度.PsII最大光化学效率、光化学量子效率显著下降,但胞间CO2浓度、非光化学猝灭系数以及叶黄素循脱环氧化状态(Z+0.5A)/(V+A+Z)和Z含量升高.两干旱处理植株的影响程度存在差异.这表明在长时间干旱条件下,欧李叶片光合作用的降低受到气孔与非气孔因素的双重影响,叶黄素循环的启动增加了胁迫条件下的热耗散能力以保护光合机构免受干旱胁迫的进一步伤害.%In order to study the light response mechanisms of Cerasus humilis under drought stress, leaf gas exchange and chlorophyll fluorescence parameters were measured with mild and severe drought treatment. The results showed that net photosynthesis rate (Pn), transpiration rate (E), water utilization efficiency (WUE), stomatal conductance (Gs) and maximal photochemical efficiency of PS Ⅱ (Fv/Fm) decreased significantly in seedlings of C. humilis under drought stress. While the values of intercellular CO2 concentration (Ci), non-photochemical quenching coefficient (NPQ) and the ratio of Z+0.5A and V+A+Z increased. These results indicated that the decrease of photosynthetic capacity was attributed to both stomatal limitation and non-stomatal limitation under long drought treatment. The capacity of heat dissipation was improved by initiating of the xanthophyll cycle,which resulted in the protection of the photosynthetic apparatus from the damage of drought stress.

  13. Does Primary Productivity Turn Up the Volume? Exploring the Relationship Between Chlorophyll a and the Soundscape of Coral Reefs in the Pacific.

    Science.gov (United States)

    Fisher-Pool, Pollyanna I; Lammers, Marc O; Gove, Jamison; Wong, Kevin B

    2016-01-01

    Chlorophyll is the basis for ecosystem productivity in most marine environments. We report on an ongoing effort to examine whether ambient sounds are tied to chlorophyll levels. We hypothesized that an increase in food-web available energy will be distributed across trophic levels, eventually reaching sound-producing animals and increasing acoustic levels. To test our hypothesis, we compared reef environments to explore links between soundscapes and chlorophyll a concentrations. The study sites resided in disparate oceanographic regimes that experienced substantially different oceanographic conditions. We anticipated that the results would show differing patterns of primary productivity between sites and therefore would be reflected in the soundscapes.

  14. Multiparameter fluorescence spectroscopic imaging of cell function

    Science.gov (United States)

    Bright, Gary R.

    1994-08-01

    The ability to quantitate physiological parameters in single living cells using fluorescence spectroscopic imaging has expanded our understanding of many cell regulatory processes. Previous studies have focussed on the measurement of single parameters, such as the concentration of calcium, and more recently two parameters, such as calcium and pH using fluorescence ratio imaging. The complexity of the interrelationships among cell biochemical reactions suggests a need to extend the measurement scheme to several parameters. Expansion of the number of parameters involves several complexities associated with fluorescent probe selection and instrumentation design as well as the processing and management of the data. A system has been assembled which provides maximum flexibility in multiparameter fluorescence imaging measurements. The system provides multiple combinations of excitation, dichroic mirror, and emission wavelengths. It has automatic acquisition of any number of parameters. The number of parameters is primarily limited by the selection of fluorescent probes with nonoverlapping spectra. We demonstrate the utility of the system by the coordinated monitoring of stimulated changes in the concentrations of calcium, magnesium, and pH using fluorescence ratio imaging coupled with a conventional transmitted light image of single smooth muscle cells. The results demonstrate coordinated changes in some instances but uncoordinated changes in others.

  15. Investigating the impact of NaCl salinity on growth, β-carotene, and chlorophyll a in the content life of halophytes of algae Chlorella sp.

    Directory of Open Access Journals (Sweden)

    Mojtaba Fathi

    2013-05-01

    Full Text Available Algae are used for many purposes as: food industry, animal feeding, soil enrichment andbiodiesel production. Chlorella is widely cultivated from microalgae species as it is rich in nutrients andhas its implementation as a healthy food use. In this study, the impact of NaCl salinity on growth, betacarotene,and chlorophyll a of Chlorella sp. has been investigated. This study results in three salinities(10, 30, 50 g L-1, respectively have shown that 30 g L-1 concentration has the highest value of cellnumber in day 15th and there was no significant difference between salinities on day 15th (p>0.05. Βetacaroteneresult has shown 50 g L-1 salinity and the highest value of beta-carotene did not indicate anystatistically significant differences between treatments (p>0.05. Chlorophyll a result has shown highestvalue in all treatments (it was in 50 g L-1. However, there was no significant difference betweensalinities on day 5th (p>0.05.

  16. Ab initio calculation of UV-absorption spectra of chlorophyll a: Comparison study between RHF/CIS, TDDFT, and semi-empirical methods

    Directory of Open Access Journals (Sweden)

    Veinardi Suendo

    2012-07-01

    Full Text Available Chlorophyll a is one the most abundant pigment on Earth that responsible for trapping the light energy to perform photosynthesis in green plants. This molecule has been studied for many years from different point of views in both experimental and theoretical interests. In this study, the restricted Hartree-Fock configuration interaction single (RHF/CIS, time-dependent density functional theory (TDDFT and several semi-empirical methods (CNDO/s and ZINDO calculations were carried out to reconstruct the UV-Vis absorption spectra of chlorophyll a. In some extend, the calculation results based on single molecule approach were succeeded to reconstruct the absorption spectra but required to be rescaled to fit the experimental one. In general, the semi-empirical methods provide better energy scaling factor that closer to unity. However, they lack of vertical transition fine features with respect to the spectrum obtained experimentally. Here, the ab initio calculations provide more complete features, especially the TDDFT at high level of basis sets that also has a good accuracy in the transition energies. The contribution of ground states and excited states orbitals in the main vertical transitions is discussed based on delocalization nature of the wavefunctions and the presence of solvent through polarizable continuum model (PCM.

  17. Effects of Para-hydroxybenzoic Acid on Chlorophyll Fluorescence Parameter in Leaves of Cerasus sachalinensis%对-羟基苯甲酸对东北山樱桃叶绿素荧光参数的影响

    Institute of Scientific and Technical Information of China (English)

    高鹤

    2016-01-01

    The effects of para-hydroxybenzoic on fast chlorophyll fluorescence transient and its parameters in Cera-sus sachalinensis seedlings were studied through plant efficiency analyzer from Hansatch PEA.Result shows that the performance index on a basis of absorption (PIABS )of seedlings under the treatment with different concentra-tions (0.1 A,1 A & 10 A),efficiency that trapped exciton can move an election into the election transport chain be-yond QA-(ψo),quantum yield for election transport (φEo),density of RC (RC/CSm )decreased.The maximum quantum efficiency of PSII (φPo),density of RC (RC/CS0 )hardly varied,whereas that normalized total complemen-tary area above the O-J-I-P transie (Sm )increased.In addition,absorption flux per CS (ABS/RC)increased, trapped energy flux per CS (TRo/RC),election transport flux per RC (ETo/RC)and dissipated energy flux per RC (DIo/RC)hardly varied.These results demonstrate that para-hydroxybenzoic acid affect different positions of pho-tosynthesis of Cerasus sachalinensis,decrease the performance of photosynthesis,influence the photosynthesis.%以东北山樱桃(Cerasus sachalinensis Kom.)实生幼苗为试材,利用 Hansatch PEA,采用叶绿素荧光诱导动力学理论和JIP-test数据分析方法,研究了对-羟基苯甲酸对叶片叶绿素荧光参数的影响。结果表明:幼苗在不同浓度对-羟基苯甲酸(0.1A、1A、10A)处理下的叶片光合性能指数(PIABS )、捕获的激子将电子传递到电子传递链中QA-下游的其他电子受体的概率(Ψo)、用于电子传递的量子产额(φEo)和单位面积有活性的反应中心数目(RC/CSm)较对照均有所下降;PSⅡ最大量子效率(φPo)、单位面积有活性的反应中心数目(RC/CS0)几乎没有变化;而PSⅡ受体侧的电子受体库容量(Sm)则高于对照,且呈“上升-下降”趋势。天线色素吸收的能量(ABS/RC)在低浓度下有小幅升高,反应中心捕获的能量(TRo/RC)、用于电子传递的能量(ETo/RC)

  18. In situ Measurements of Phytoplankton Fluorescence Using Low Cost Electronics

    Directory of Open Access Journals (Sweden)

    Dana L. Wright

    2013-06-01

    Full Text Available Chlorophyll a fluorometry has long been used as a method to study phytoplankton in the ocean. In situ fluorometry is used frequently in oceanography to provide depth-resolved estimates of phytoplankton biomass. However, the high price of commercially manufactured in situ fluorometers has made them unavailable to some individuals and institutions. Presented here is an investigation into building an in situ fluorometer using low cost electronics. The goal was to construct an easily reproducible in situ fluorometer from simple and widely available electronic components. The simplicity and modest cost of the sensor makes it valuable to students and professionals alike. Open source sharing of architecture and software will allow students to reconstruct and customize the sensor on a small budget. Research applications that require numerous in situ fluorometers or expendable fluorometers can also benefit from this study. The sensor costs US$150.00 and can be constructed with little to no previous experience. The sensor uses a blue LED to excite chlorophyll a and measures fluorescence using a silicon photodiode. The sensor is controlled by an Arduino microcontroller that also serves as a data logger.

  19. Combining fluorescence and bioluminescence microscopy.

    Science.gov (United States)

    Goda, Kazuhito; Hatta-Ohashi, Yoko; Akiyoshi, Ryutaro; Sugiyama, Takashi; Sakai, Ikuko; Takahashi, Takeo; Suzuki, Hirobumi

    2015-08-01

    Bioluminescence microscopy has revealed that gene expression in individual cells can respond differently to the same stimulus. To understand this phenomenon, it is important to sequentially observe the series of events from cellular signal transduction to gene expression regulated by specific transcription factors derived from signaling cascades in individual cells. However, these processes have been separately analyzed with fluorescence and bioluminescence microscopy. Furthermore, in culture medium, the background fluorescence of luciferin-a substrate of luciferase in promoter assays of gene expression in cultured cells-confounds the simultaneous observation of fluorescence and bioluminescence. Therefore, we optimized conditions for optical filter sets based on spectral properties and the luciferin concentration based on cell permeability for fluorescence observation combined with bioluminescence microscopy. An excitation and emission filter set (492-506 nm and 524-578 nm) was suitable for green fluorescent protein and yellow fluorescent protein imaging of cells, and >100 μM luciferin was acceptable in culture medium based on kinetic constants and the estimated intracellular concentration. Using these parameters, we present an example of sequential fluorescence and bioluminescence microscopic observation of signal transduction (translocation of protein kinase C alpha from the cytoplasm to the plasma membrane) coupled with activation of gene expression by nuclear factor of kappa light polypeptide B in individual cells and show that the gene expression response is not completely concordant with upstream signaling following stimulation with phorbol-12-myristate-13-acetate. Our technique is a powerful imaging tool for analysis of heterogeneous gene expression together with upstream signaling in live single cells.

  20. Quality assessment of urban trees using growth visual and chlorophyll fluorescence indicators

    Directory of Open Access Journals (Sweden)

    Uhrin Peter

    2016-06-01

    Full Text Available Urbanised landscape represents composed structures of technical and biotic elements where social and economy activities create living space for human society but with strongly changed environment. To dominant characters belong climate changes with increased air temperature, drought and emission load, which has developed wide spectrum of stress factors influencing the urban vegetation. For the assessment of plant growth and adaptation response, we have used Sycamore maple (Acer pseudoplatanus L. as study model woody plant. In the framework of visual characters, we assessed the following indicators: (a assimilation organs (leaf necrosis; (b crown quality (degree of foliage and degree of dead tree crown; (c trunk and branch quality (mechanical damage, incidence of wood destroying fungus and trunk cavities and callus healing of trunk wounds. Each indicator was assessed in five-point scale, and in the end, the common index of quality was calculated. The quality index achieved 9.33 points in the first and 10.33 in the second evaluation periods in the Nitra city and 2.66 at the both assessed periods in the comparable rural park. In the group of physiological indicators, chlorophyll a fluorescence marker and its Fv/Fm parameter were used. Within three repeating assessment during growing season (June, August and September, the average values reached Fv/Fm = 0.814 in the city and Fv/Fm = 0.829 in rural park. The results confirmed statistical significances between loaded city conditions and relatively clean rural locality. Used markers have shown as appropriate tools for growth response measurements of street trees in a changed urban environment.

  1. Relative importance of phosphorus, invasive mussels and climate for patterns in chlorophyll a and primary production in Lakes Michigan and Huron

    Science.gov (United States)

    Warner, David M.; Lesht, Barry M.

    2015-01-01

    1. Lakes Michigan and Huron, which are undergoing oligotrophication after reduction of phosphorus loading, invasion by dreissenid mussels and variation in climate, provide an opportunity to conduct large-scale evaluation of the relative importance of these changes for lake productivity. We used remote sensing, field data and an information-theoretic approach to identify factors that showed statistical relationships with observed changes in chlorophyll a (chla) and primary production (PP). 2. Spring phosphorus (TP), annual mean chla and PP have all declined significantly in both lakes since the late 1990s. Additionally, monthly mean values of chla have decreased in many but not all months, indicating altered seasonal patterns. The most striking change has been the decrease in chla concentration during the spring bloom. 3. Mean chlorophyll a concentration was 17% higher in Lake Michigan than in Lake Huron, and total production for 2008 in Lake Michigan (9.5 tg year 1 ) was 10% greater than in Lake Huron (7.8 tg year 1 ), even though Lake Michigan is slightly smaller (by 3%) than Lake Huron. Differences between the lakes in the early 1970s evidently persisted to 2008. 4. Invasive mussels influenced temporal trends in spring chla and annual primary production. However, TP had a greater effect on chla and primary production than did the mussels, and TP varied independently from them. Two climatic variables (precipitation and air temperature in the basins) influenced annual chla and annual PP, while the extent of ice cover influenced TP but not chla or primary production. Our results demonstrate that observed temporal patterns in chla and PP are the result of complex interactions of P, climate and invasive mussels.

  2. Fundamentals of fluorescence and fluorescence microscopy.

    Science.gov (United States)

    Wolf, David E

    2013-01-01

    This chapter discusses the fundamental physics of fluorescence. The application of fluorescence to microscopy represents an important transition in the development of microscopy, particularly as it applies to biology. It enables quantitating the amounts of specific molecules within a cell, determining whether molecules are complexing on a molecular level, measuring changes in ionic concentrations within cells and organelles, and measuring molecular dynamics. This chapter also discusses the issues important to quantitative measurement of fluorescence and focuses on four of quantitative measurements of fluorescence--boxcar-gated detection, streak cameras, photon correlation, and phase modulation. Although quantitative measurement presents many pitfalls to the beginner, it also presents significant opportunities to one skilled in the art. This chapter also examines how fluorescence is measured in the steady state and time domain and how fluorescence is applied in the modern epifluorescence microscope.

  3. Gut fluorescence analysis of barnacle larvae: An approach to quantify the ingested food

    Science.gov (United States)

    Gaonkar, Chetan A.; Anil, Arga Chandrashekar

    2012-10-01

    Gut fluorescence analysis can provide a snapshot of ingested food and has been employed in feeding studies of various organisms. In this study we standardised the gut fluorescence method using laboratory-reared barnacle larvae (Balanus amphitrite) fed with mono-algal diet Chaetoceros calcitrans, a unicellular diatom at a cell concentration of 2 × 105 cells ml-1. The gut fluorescence of IV-VI instar nauplii was found to be 370(±12) ng chlorophyll a larva-1 and in faecal pellets it was 224(±63) ng chlorophyll a larva-1. A phaeopigment concentration in larval gut was found to be 311(±13) ng larva-1 and in faecal pellets it was 172(±61) ng larva-1. The study also analysed larval samples collected from the field during different seasons from a tropical environment influenced by monsoons (Dona Paula bay, Goa, west coast of India), with characteristic temporal variations in phytoplankton abundance and diversity. Gut fluorescence of larvae obtained during the post-monsoon season was consistently higher when compared to the pre-monsoon season, suggesting the predominance of autotrophic forms in the larval gut during the post-monsoon season. Whereas, the low gut fluorescence obtained during the pre-monsoon season indicated the ingestion of food sources other than autotrophs. Such differences observed in the feeding behaviour of larvae could be due to differential availability of food for the larvae during different seasons and indicate the capability of larvae to feed on wide range of food sources. This study shows the value of the fluorescence method in feeding studies of planktotrophic organisms and in the evaluation of ecosystem dynamics.

  4. Improved Accuracy of Chlorophyll-a Concentration Estimates from MODIS Imagery Using a Two-Band Ratio Algorithm and Geostatistics: As Applied to the Monitoring of Eutrophication Processes over Tien Yen Bay (Northern Vietnam

    Directory of Open Access Journals (Sweden)

    Nguyen Thi Thu Ha

    2013-12-01

    Full Text Available Sea eutrophication is a natural process of water enrichment caused by increased nutrient loading that severely affects coastal ecosystems by decreasing water quality. The degree of eutrophication can be assessed by chlorophyll-a concentration. This study aims to develop a remote sensing method suitable for estimating chlorophyll-a concentrations in tropical coastal waters with abundant phytoplankton using Moderate Resolution Imaging Spectroradiometer (MODIS/Terra imagery and to improve the spatial resolution of MODIS/Terra-based estimation from 1 km to 100 m by geostatistics. A model based on the ratio of green and blue band reflectance (rGBr is proposed considering the bio-optical property of chlorophyll-a. Tien Yen Bay in northern Vietnam, a typical phytoplankton-rich coastal area, was selected as a case study site. The superiority of rGBr over two existing representative models, based on the blue-green band ratio and the red-near infrared band ratio, was demonstrated by a high correlation of the estimated chlorophyll-a concentrations at 40 sites with values measured in situ. Ordinary kriging was then shown to be highly capable of predicting the concentration for regions of the image covered by clouds and, thus, without sea surface data. Resultant space-time maps of concentrations over a year clarified that Tien Yen Bay is characterized by natural eutrophic waters, because the average of chlorophyll-a concentrations exceeded 10 mg/m3 in the summer. The temporal changes of chlorophyll-a concentrations were consistent with average monthly air temperatures and precipitation. Consequently, a combination of rGBr and ordinary kriging can effectively monitor water quality in tropical shallow waters.

  5. Principles of fluorescence techniques

    CERN Document Server

    2016-01-01

    Fluorescence techniques are being used and applied increasingly in academics and industry. The Principles of Fluorescence Techniques course will outline the basic concepts of fluorescence techniques and the successful utilization of the currently available commercial instrumentation. The course is designed for students who utilize fluorescence techniques and instrumentation and for researchers and industrial scientists who wish to deepen their knowledge of fluorescence applications. Key scientists in the field will deliver theoretical lectures. The lectures will be complemented by the direct utilization of steady-state and lifetime fluorescence instrumentation and confocal microscopy for FLIM and FRET applications provided by leading companies.

  6. Reviews in fluorescence 2010

    CERN Document Server

    Geddes, Chris D

    2011-01-01

    ""Reviews in Fluorescence 2010"", the seventh volume of the book serial from Springer, serves as a comprehensive collection of current trends and emerging hot topics in the field of fluorescence and closely related disciplines. It summarizes the year's progress in fluorescence and its applications, with authoritative analytical reviews specialized enough to be attractive to professional researchers, yet also appealing to the wider audience of scientists in related disciplines of fluorescence. ""Reviews in Fluorescence"" offers an essential reference material for any lab working in the fluoresc

  7. [Studies on toxicity of four kinds of heavy metals in water by synchronous-scan fluorescence].

    Science.gov (United States)

    Duan, Jing-Bo; Liu, Wen-Qing; Zhang, Yu-Jun; Zhao, Nan-Jing; Wang, Zhi-Gang; Yin, Gao-Fang; Fang, Li; Liu, Jing

    2013-05-01

    Spectrofluorometry of chlorella pyrenoidosa was studied by three dimensional excitation-emission (3DEEM) fluorescence spectroscopy and synchronous scan fluorescence spectroscopy with Delta gamma = 20 nm in the stress of Hg+, Cd2+, Cu2+ and Zn2+. The conclusion from two kinds of Spectrofluorometry was the same: after 96h stress by heavy metals, the maximum fluorescence values reduced obviously, chlorophyll-a and chlorophyll-b in the photosynthetic system were seriously damaged by heavy metal. Further analysis of the correlations between heavy metal concentration and fluorescence quenching efficiency I0/I can conclude that the toxicity of heavy metal and the fluorescence quenching efficiency I0/I were positively correlated, and they all increased with the heavy metal concentration and stress time. For one kind of heavy metals, synchronous scan fluorometry is a sensitive method for its toxicity assessment. Compared to 3DEEM fluorescence spectroscopy, synchronous scan fluorescence spectroscopy is less time consuming and of higher selectivity. It is suitable to assess the toxicity of pollutions in water.

  8. Data assimilation of physical and chlorophyll a observations in the California Current System using two biogeochemical models

    Science.gov (United States)

    Mattern, Jann Paul; Song, Hajoon; Edwards, Christopher A.; Moore, Andrew M.; Fiechter, Jerome

    2017-01-01

    Biogeochemical numerical models coupled to physical ocean circulation models are commonly combined with data assimilation in order to improve the models' state or parameter estimates. Yet much still needs to be learned about important aspects of biogeochemical data assimilation, such as the effect of model complexity and the importance of more realistic model formulations on assimilation results. In this study, 4D-Var-based state estimation is applied to two biogeochemical ocean models: a simple NPZD model with 4 biogeochemical variables (including 1 phytoplankton, 1 zooplankton) and the more complex NEMURO model, containing 11 biogeochemical variables (including 2 phytoplankton, 3 zooplankton). Both models are coupled to a 3-dimensional physical ocean circulation model of the U.S. west coast based on the Regional Ocean Modelling System (ROMS). Chlorophyll satellite observations and physical observations are assimilated into the model, yielding substantial improvements in state estimates for the observed physical and biogeochemical variables in both model formulations. In comparison to the simpler NPZD model, NEMURO shows a better overall fit to the observations. The assimilation also results in small improvements for simulated nitrate concentrations in both models and no apparent degradation of the output for other unobserved variables. The forecasting skill of the biogeochemical models is strongly linked to model performance without data assimilation: for both models, the improved fit obtained through assimilation degrades at similar relative rates, but drops to different absolute levels. Despite the better performance of NEMURO in our experiments, the choice of model and desired level of complexity should depend on the model application and the data available for assimilation.

  9. Holograms preparation using commercial fluorescent benzyl

    Energy Technology Data Exchange (ETDEWEB)

    Dorantes-GarcIa, V; Olivares-Perez, A; Ordonez-Padilla, M J; Mejias-Brizuela, N Y, E-mail: valdoga@Hotmail.com, E-mail: olivares@inaoep.mx [Instituto Nacional de Astrofisica, Optica y Electronica (INAOE), Coordinacion de Optica, Calle Luis Enrique Erro N0 1, Santa Maria Tonantzintla, Puebla (Mexico)

    2011-01-01

    We have been able to make holograms with substances such as fluorescence thought of light blue laser to make transmissions holograms, using ammonium dichromate as photo-sensitizer and polyvinyl alcohol (PVA) as matrix. Ammonium dichromate inhibit the fluorescence properties of inks, both mixed in a (PVA) matrix, but we avoid this chemical reaction and we show the results to use the method of painting hologram with fluorescents ink and we describe how the diffraction efficiency parameter changes as a function of the ink absorbed by the emulsion recorded with the gratings, we got good results, making holographic gratings with a blue light from laser diode 470 nm. And we later were painting with fluorescent ink, integrating fluorescence characteristics to the hologram.

  10. Influence on Chlorophyll Fluorescence Dynamics Parameter of Harm Stages of Dendroctonus armandi by Bark Beetles in Qinling Mountains%小蠹虫危害对秦岭华山松叶绿素荧光动力学参数的影响

    Institute of Scientific and Technical Information of China (English)

    王静静; 陈辉; 李宗波

    2011-01-01

    Imaging-Pam chlorophyll fluorescence appliance were used to analyze the dynamic parameters of Dentroctonus armand in Qinling Mountains in the harm stage. The key physiological parameters to assess the harm stage of the pest were found as Fm=0.139 7,F0= 0. 089 74,Fv/Fm=0. 20 and Fv/F0=0. 349.%利用Imaging-Pam脉冲调制荧光成像仪测定秦岭林区不同危害阶段的华山松离体针叶叶绿素荧光变化状况.结果发现F:0.139 7,F=0.089 74,F/F=0.20,F/F=0.349是华山松受害后的关键生理指标.

  11. Fluorescence correlation spectroscopy

    NARCIS (Netherlands)

    Hink, M.A.; Verveer, P.J.

    2015-01-01

    Fluorescence fluctuation spectroscopy techniques allow the quantification of fluorescent molecules present at the nanomolar concentration level. After a brief introduction to the technique, this chapter presents a protocol including background information in order to measure and quantify the molecul

  12. Long-term investigations of summertime chlorophyll a, particulate organic carbon and continuously observations of vertical particle flux in Fram Strait and the central Arctic Ocean

    Science.gov (United States)

    Nöthig, Eva-Maria; Bauerfeind, Eduard; Bracher, Astrid; Cherkasheva, Alexandra; Fahl, Kirsten; Lalande, Catherine; Metfies, Katja; Peeken, Ilka; Salter, Ian; Boetius, Antje; Soltwedel, Thomas

    2016-04-01

    The Arctic Ocean is one of the key regions where the effect of climate change is most pronounced due to massive reduction of sea ice volume and extent. Most of the sea ice is transported out of the Arctic Ocean with the cold East Greenland Current (EGC) in the western Fram Strait, while warm Atlantic water enters the Arctic Ocean with the West Spitsbergen Current (WSC) in the eastern Fram Strait. In this scenario we conducted several cruises to Fram Strait and the central Arctic Ocean (CAO) between 1991 and 2015 to monitor phytoplankton biomass, particulate organic carbon standing stocks during summer at discrete depth using water bottle samples, and the sedimentation of organic matter by means of moored sediment traps throughout the year. With our study we aim at tracing effects of environmental changes in the pelagic system and impacts on the fate of organic matter produced in the upper water column in a region that is anticipated to react rapidly to climate change. We will present data sets of phytoplankton biomass (chlorophyll a) and particulate organic carbon (POC) from the upper 100 m of the water column as well as results from vertical particle flux measurements with yearly deployed sediment traps at the LTER (Long-Term Ecological Research) observatory HAUSGARTEN in eastern Fram Strait (79°/4°E) between 2000 and 2012 and from two locations in the CAO close to the Lomonosov Ridge (1995/96) and the Gakkel Ridge (2011/12). Analyses of the material collected by the sediment traps allowed us to track seasonal and inter-annual changes in the upper water column at HAUSGARTEN and in the CAO. Whereas chlorophyll a (integrated values 0 -100 m) showed only a slight increase in eastern Fram Strait, it stayed more or less constant in the CAO and western Fram Strait, with the exception of 2015 exhibiting less biomass during late summer in the CAO. Highest biomass was found in the eastern Fram Strait and lowest in the heavily ice-covered regions. POC distribution

  13. Safe biodegradable fluorescent particles

    Science.gov (United States)

    Martin, Sue I.; Fergenson, David P.; Srivastava, Abneesh; Bogan, Michael J.; Riot, Vincent J.; Frank, Matthias

    2010-08-24

    A human-safe fluorescence particle that can be used for fluorescence detection instruments or act as a safe simulant for mimicking the fluorescence properties of microorganisms. The particle comprises a non-biological carrier and natural fluorophores encapsulated in the non-biological carrier. By doping biodegradable-polymer drug delivery microspheres with natural or synthetic fluorophores, the desired fluorescence can be attained or biological organisms can be simulated without the associated risks and logistical difficulties of live microorganisms.

  14. Comparative Fluorescence Resonance Energy-Transfer Study in Pluronic Triblock Copolymer Micelle and Niosome Composed of Biological Component Cholesterol: An Investigation of Effect of Cholesterol and Sucrose on the FRET Parameters.

    Science.gov (United States)

    Roy, Arpita; Kundu, Niloy; Banik, Debasis; Sarkar, Nilmoni

    2016-01-14

    The formation of pluronic triblock copolymer (F127)-cholesterol-based niosome and its interaction with sugar (sucrose) molecules have been investigated. The morphology of F127-cholesterol -based niosome in the presence of sucrose has been successfully demonstrated using dynamic light scattering (DLS) and transmission electron microscopic (TEM) techniques. The DLS profiles and TEM images clearly suggest that the size of the niosome aggregates increases significantly in the presence of sucrose. In addition to structural characterization, a detailed comparative fluorescence resonance energy transfer (FRET) study has been carried out in these F127-containing aggregates, involving coumarin 153 (C153) as donor (D) and rhodamine 6G (R6G) as an acceptor (A) to monitor the dynamic heterogeneity of the systems. Besides, time-resolved anisotropy and fluorescence correlation spectroscopy measurements have been carried out to monitor the rotational and lateral diffusion motion in these F127-cholesterol-based aggregates using C153 and R6G, respectively. During the course of FRET study, we have observed multiple time constants of FRET inside the F127-cholesterol-based niosomes in contrast with the F127 micelle. This corresponds to the presence of more than one preferential donor-acceptor (D-A) distance in niosomes than in F127 micelle. FRET has also been successfully used to probe the effect of sucrose on the morphology of F127-cholesterol-based niosome. In the presence of sucrose, the time constant of FRET further increases as the D-A distances increase in sucrose-decorated niosome. Finally, the excitation-wavelength-dependent FRET studies have indicated that as the excitation of donor molecules varies from 408 to 440 nm the contribution of the faster rise component of the acceptor enhances considerably, which clearly establishes the dynamics heterogeneity of both systems. Our findings also indicate that FRET is completely intravesicular in nature in these block copolymer

  15. Spatio-temporal variability of phytoplankton (Chlorophyll-a) in relation to salinity, suspended sediment concentration, and light intensity in a macrotidal estuary

    Science.gov (United States)

    Azhikodan, Gubash; Yokoyama, Katsuhide

    2016-09-01

    The influences of environmental gradients on the spatio-temporal variability of phytoplankton (Chlorophyll-a) in the macrotidal Chikugo River Estuary were studied during a two-week period of September 2010. Vertical profiles of salinity, turbidity, and light intensity were measured at 18 stations separated by a 1-km interval. Water samples for the determination of suspended sediment concentration (SSC), concentration of Chlorophyll-a (Chl-a) and Pheophytin-a (Pheo-a) were collected from the surface layer at all stations. The estuarine water column was vertically well mixed with high SSC (100-2000 mg L-1) during spring tide and the photic depth (zp) was less than 0.2 m. The mixing depth (zm) was more than 10 times the photic depth for the major part of the estuary. The estuary gradually changed to partially mixed with decrease in SSC (≤400 mg L-1) during the intermediate tide. The estuary became stratified with low SSC (20-50 mg L-1) during neap tide and the zp reached 4 m. The zm was less than 0.5 times the zp for the whole estuary. Light attenuation was dominated by SSC and the zp varied according to semidiurnal and semilunar tidal cycle. The zp: zm ratio did not show any relationship with Chl-a in the Chikugo river estuary. This is because the Chl-a concentration reached maximum two to three days after the neap tide. The peak concentration of Chl-a was located near the low salinity region and that of Pheo-a was located in the Estuarine Turbidity Maximum (ETM) zone. The Pheo-a concentration reached maximum during the spring tide. A good relation between zp: zm ratio and Pheo-a indicates that the increase in Pheo-a was caused by the light limitation due to suspended sediment and the responses of the Pheo-a on the light condition was instantaneous. These phenomena were remarkably found in the interface between freshwater and saltwater. Light availability driven by mixing and ETM process during semidiurnal and semilunar tidal cycle is the controlling factor of the

  16. Applicability of three-band model for estimating chlorophyll-a concentration in two Asian lakes (Lake Kasumigaura, Japan and Lake Dianchi, China)

    Science.gov (United States)

    Matsushita, B.; Yang, W.; Chen, J.; Fukushima, T.

    2009-12-01

    Bunkei Matsushita1*, Wei Yang1, 2, Jin Chen2 and Takehiko Fukushima1 1Graduate School of Life and Environmental Sciences, University of Tsukuba 1-1-1 Tennoudai, Tsukuba, Ibaraki, 305-8572, Japan E-mails: mbunkei@sakura.cc.tsukuba.ac.jp, fukusima@sakura.cc.tsukuba.ac.jp 2 State key laboratory of earth surface processes and resource ecology, Beijing Normal University, Beijing 100875, China E-mails: chenjin@ires.cn, yangwei1022@gmail.com Abstract: The remote sensing of chlorophyll-a in case II water has been far less successful than that in case I water, due mainly to the complex interactions among optically active substances (i.e., phytoplankton, tripton, colored dissolved organic matter, and water) in the former. To address this problem, Gitelson et al. (2008) suggested a three-band model, which can minimize the effects of tripton, colored dissolved organic matter (CDOM), and pure water, and thus promised an accurate estimation of chlorophyll-a. In this study, we used three datasets with different phytoplankton species to test the performance of the three-band model developed by Gitelson et al. The major findings of our study were as follows: (1) the mechanism of the three-band model could work very well for each phytoplankton species (R2>0.84, rRMSE<23%); (2) the slope and intercept of the three-band model strongly depended on variation of phytoplankton species; (3) chlorophyll-specific absorption coefficients at 440 nm (a*ph(440)) could be used to predict the slope and intercept of the three-band model for different species of phytoplankton. Compared with the previous three-band model, the RMSEs of the improved three-band model were reduced from 37.2 mg m-3 to 7.3 mg m-3, and from 34.3 mg m-3 to 15.9 mg m-3, for Lake Kasumigaura, and Lake Dianchi, respectively. Keywords: phytoplankton species, field survey, tank experiment, bio-optical model, case II water

  17. Optical Reflectance and Fluorescence for Detecting Nitrogen Needs in Zea mays L.

    Science.gov (United States)

    McMurtrey, J. E.; Middleton, E. M.; Corp. L. A.; Campbell, P. K. Entcheva; Butcher, L. M.; Daughtry, C. S. T.

    2003-01-01

    Nitrogen (N) status in field grown corn (Zea mays L.) was assessed using spectral techniques. Passive reflectance remote sensing and, both passive and active fluorescence sensing methods were investigated. Reflectance and fluorescence methods are reported to detect changes in the primary plant pigments (chlorophylls a and b; carotenoids) in higher plant species. As a general rule, foliar chlorophyll a (Chl a) and chlorophyll b (Chl b) usually exist in approx.3:l ratio. In plants under stress, Chl b content is affected before Chl a reductions occur. For reflectance, a version of the chlorophyll absorption in reflectance index (CARI) method was tested with narrow bands from the Airborne Imaging Spectroradiometer for Applications (ASIA). CARI minimizes the effects of soil background on the signal from green canopies. A modified CARI (MCARI) was used to track total Chl a levels in the red dip of the spectrum from the corn canopy. A second MCARI was used to track the auxiliary plant pigments (Chl b and the carotenoids) in the yellow/orange/red edge part of the reflectance spectrum. The difference between these two MCARI indices detected variations in N levels across the field plot canopies using ASIA data. At the leaf level, ratios of fluorescence emissions in the blue, green, red and far-red wavelengths sensed responses that were associated with the plant pigments, and were indicative of energy transfer in the photosynthetic process. N stressed corn stands could be distinguish from those with optimally applied N with fluorescence emission spectra obtained from individual corn leaves. Both reflectance and fluorescence methods are sensitive in detecting corn N needs and may be especially powerful in monitoring crop conditions if both types of information can be combined.

  18. Method 447.0 - Determination of Chlorophylls a and b and Identification of Other Pigments of Interest in Marine and Freshwater Algae Using High Performance Liquid Chromatography with Visible Wavelength Detection

    Science.gov (United States)

    This method provides a procedure for determination of chlorophylls a (chl a) and b (chl b) found in marine and freshwater phytoplankton. Reversed phase high performance liquid chromatography (HPLC) with detection at 440 nm is used to separate the pigments from a complex pigment ...

  19. Separate introns gained within short and long soluble peridinin-chlorophyll a-protein genes during radiation of Symbiodinium (Dinophyceae) clade A and B lineages - PLoS One

    Science.gov (United States)

    Here we document introns in two Symbiodinium clades that were most likely gained following divergence of this genus from other peridinin-containing dinoflagellate lineages. Soluble peridinin-chlorophyll a-proteins (sPCP) occur in short and long forms in different species, and all...

  20. Adaptive Optics for Fluorescence Correlation Spectroscopy

    CERN Document Server

    Leroux, Charles Edouard; Derouard, Jacques; Delon, Antoine

    2011-01-01

    Fluorescence Correlation Spectroscopy (FCS) yields measurement parameters (number of molecules, diffusion time) that characterize the concentration and kinetics of fluorescent molecules within a supposedly known observation volume. Absolute derivation of concentrations and diffusion constants therefore requires preliminary calibrations of the confocal Point Spread Function with phantom solutions under perfectly controlled environmental conditions. In this paper, we quantify the influence of optical aberrations on single photon FCS and demonstrate a simple Adaptive Optics system for aberration correction. Optical aberrations are gradually introduced by focussing the excitation laser beam at increasing depths in fluorescent solutions with various refractive indices, which leads to drastic depth-dependent bias in the estimated FCS parameters. Aberration correction with a Deformable Mirror stabilizes these parameters within a range of several tens of \\mum into the solution. We also demonstrate, both theoretically...

  1. Spatial and temporal variabilities of spring Asian dust events and their impacts on chlorophyll-a concentrations in the western North Pacific Ocean

    Science.gov (United States)

    Yoon, Joo-Eun; Kim, Kitae; Macdonald, Alison M.; Park, Ki-Tae; Kim, Hyun-Cheol; Yoo, Kyu-Cheul; Yoon, Ho-Il; Yang, Eun Jin; Jung, Jinyoung; Lim, Jae-Hyun; Kim, Ju-Hyoung; Lee, Jiyoung; Choi, Tae-Jun; Song, Jae-Min; Kim, Il-Nam

    2017-02-01

    As the western North Pacific Ocean is located downwind of the source regions for spring Asian dust, it is an ideal location for determining the response of open waters to these events. Spatial analysis of spring Asian dust events from source regions to the western North Pacific, using long-term daily aerosol index data, revealed three different transport pathways supported by the westerly wind system: one passing across the northern East/Japan Sea (40°N-50°N), a second moving over the entire East/Japan Sea (35°N-55°N), and a third flowing predominantly over the Siberian continent (>50°N). Our results indicate that strong spring Asian dust events can increase ocean primary productivity by more than 70% (>2-fold increase in chlorophyll-a concentrations) compared to weak/nondust conditions. Therefore, attention should be paid to the recent downturn in the number of spring Asian dust events and to the response of primary production in the western North Pacific to this change.

  2. Storm impact on sea surface temperature and chlorophyll a in the Gulf of Mexico and Sargasso Sea based on daily cloud-free satellite data reconstructions

    Science.gov (United States)

    Shropshire, Taylor; Li, Yizhen; He, Ruoying

    2016-12-01

    Upper ocean responses to tropical storms/hurricanes have been extensively studied using satellite observations. However, resolving concurrent sea surface temperature (SST) and chlorophyll a (chl a) responses along storm tracks remains a major challenge due to extensive cloud coverage in satellite images. Here we produce daily cloud-free SST and chl a reconstructions based on the Data INterpolating Empirical Orthogonal Function method over a 10 year period (2003-2012) for the Gulf of Mexico and Sargasso Sea regions. Daily reconstructions allow us to characterize and contrast previously obscured subweekly SST and chl a responses to storms in the two main storm-impacted regions of the Atlantic Ocean. Statistical analyses of daily SST and chl a responses revealed regional differences in the response time as well as the response sensitivity to maximum sustained wind speed and translation speed. This study demonstrates that SST and chl a responses clearly depend on regional ocean conditions and are not as universal as might have been previously suggested.

  3. Response of phytoplankton community structure and size-fractionated Chlorophyll a in an upwelling simulation experiment in the western South China Sea

    Science.gov (United States)

    Cui, Dongyang; Wang, Jiangtao; Tan, Liju

    2016-10-01

    The South China Sea (SCS), which is the largest marginal sea in the western tropical Pacific, plays an important role in regional climate change. However, the research on the phytoplankton community structure (PCS) response to the upwelling remains inadequate. In January 2014, the upwelling simulation experiment was performed in the western SCS. Results indicate that the nutrient-rich bottom water not only increased the total Chlorophyll a (Chl a) concentrations, but would potentially altered the PCS. Due to new nutrients added, microphytoplankton had more sensitivity response to nutrient uptake than other phytoplankton groups. The variation of nutrients induced by formation, weakening and disappearance of upwelling resulted in phytoplankton species succession from cyanophyta to bacillariophyta. It may be the leading factor of the changes in PCS and size-fractionated Chl a. The initial concentration of DIP less than 0.1 μmolL-1 could not sustain the phytoplankton growth. This indicates that phosphorus may be the limiting factor in the western SCS.

  4. Evidence of large-scale chronic eutrophication in the Great Barrier Reef: quantification of chlorophyll a thresholds for sustaining coral reef communities.

    Science.gov (United States)

    Bell, Peter R F; Elmetri, Ibrahim; Lapointe, Brian E

    2014-04-01

    Long-term monitoring data show that hard coral cover on the Great Barrier Reef (GBR) has reduced by >70 % over the past century. Although authorities and many marine scientists were in denial for many years, it is now widely accepted that this reduction is largely attributable to the chronic state of eutrophication that exists throughout most of the GBR. Some reefs in the far northern GBR where the annual mean chlorophyll a (Chl a) is in the lower range of the proposed Eutrophication Threshold Concentration for Chl a (~0.2-0.3 mg m⁻³) show little or no evidence of degradation over the past century. However, the available evidence suggests that coral diseases and the crown-of-thorns starfish will proliferate in such waters and hence the mandated eutrophication Trigger values for Chl a (~0.4-0.45 mg m⁻³) will need to be decreased to ~0.2 mg m⁻³ for sustaining coral reef communities.

  5. Spatial-Temporal Variations of Chlorophyll-a in the Adjacent Sea Area of the Yangtze River Estuary Influenced by Yangtze River Discharge

    Directory of Open Access Journals (Sweden)

    Ying Wang

    2015-05-01

    Full Text Available Carrying abundant nutrition, terrigenous freshwater has a great impact on the spatial and temporal heterogeneity of phytoplankton in coastal waters. The present study analyzed the spatial-temporal variations of Chlorophyll-a (Chl-a concentration under the influence of discharge from the Yangtze River, based on remotely sensed Chl-a concentrations. The study area was initially zoned to quantitatively investigate the spatial variation patterns of Chl-a. Then, the temporal variation of Chl-a in each zone was simulated by a sinusoidal curve model. The results showed that in the inshore waters, the terrigenous discharge was the predominant driving force determining the pattern of Chl-a, which brings the risk of red tide disasters; while in the open sea areas, Chl-a was mainly affected by meteorological factors. Furthermore, a diversity of spatial and temporal variations of Chl-a existed based on the degree of influences from discharge. The diluted water extended from inshore to the east of Jeju Island. This process affected the Chl-a concentration flowing through the area, and had a potential impact on the marine environment. The Chl-a from September to November showed an obvious response to the discharge from July to September with a lag of 1 to 2 months.

  6. Spatial and temporal distributions of Secchi depths and chlorophyll a concentrations in the Suo Nada of the Seto Inland Sea, Japan, exposed to anthropogenic nutrient loading.

    Science.gov (United States)

    Nishijima, Wataru; Umehara, Akira; Sekito, Satoshi; Okuda, Tetsuji; Nakai, Satoshi

    2016-11-15

    Thirty years of monitoring data were used to elucidate the spatial and temporal distributions of Secchi depths in the Suo Nada (Suo Sea) and to evaluate how chlorophyll a concentration and reductions of nutrient loading from the watershed affected those distributions. Secchi depths throughout the Suo Nada were positively correlated with water depths. The spatial and temporal variations of Secchi depths could be explained by variations of phytoplankton biomass in areas where the water depth exceeded 20m, but in areas shallower than 10m, other factors affecting light attenuation beside phytoplankton, which include suspended particulate matter and chromophoric dissolved organic matter, obscured relationships between phytoplankton biomass and Secchi depths. Phosphorus limited phytoplankton biomass in the Suo Nada. The main source of allochthonous phosphorus from the 1980s to the 1990s was the watershed. Because of significant reductions of nutrient loading from the watershed, the Pacific Ocean will most likely be the principal source of allochthonous phosphorus after around 2000, except in areas shallower than 10m.

  7. Unveiling the excited state energy transfer pathways in peridinin-chlorophyll a-protein by ultrafast multi-pulse transient absorption spectroscopy.

    Science.gov (United States)

    Redeckas, Kipras; Voiciuk, Vladislava; Zigmantas, Donatas; Hiller, Roger G; Vengris, Mikas

    2017-04-01

    Time-resolved multi-pulse methods were applied to investigate the excited state dynamics, the interstate couplings, and the excited state energy transfer pathways between the light-harvesting pigments in peridinin-chlorophyll a-protein (PCP). The utilized pump-dump-probe techniques are based on perturbation of the regular PCP energy transfer pathway. The PCP complexes were initially excited with an ultrashort pulse, resonant to the S0→S2 transition of the carotenoid peridinin. A portion of the peridinin-based emissive intramolecular charge transfer (ICT) state was then depopulated by applying an ultrashort NIR pulse that perturbed the interaction between S1 and ICT states and the energy flow from the carotenoids to the chlorophylls. The presented data indicate that the peridinin S1 and ICT states are spectrally distinct and coexist in an excited state equilibrium in the PCP complex. Moreover, numeric analysis of the experimental data asserts ICT→Chl-a as the main energy transfer pathway in the photoexcited PCP systems.

  8. Filling the "green gap" of the major light-harvesting chlorophyll a/b complex by covalent attachment of Rhodamine Red.

    Science.gov (United States)

    Gundlach, Kristina; Werwie, Mara; Wiegand, Sabine; Paulsen, Harald

    2009-12-01

    The major light-harvesting chlorophyll a/b complex (LHCII) greatly enhances the efficiency of photosynthesis in green plants. Recombinant LHCII can be assembled in vitro from its denatured, bacterially expressed apoprotein and plant pigments. This makes it an interesting candidate for biomimetic light-harvesting in photovoltaic applications. Due to its almost 20 pigments bound per apoprotein, LHCII absorbs efficiently in the blue and red spectral domains of visible light but less efficiently in the green domain, the so-called "green gap" in its absorption spectrum. Here we present a hybrid complex of recombinant LHCII with organic dyes that add to LHCII absorption in the green spectral region. One or three Rhodamine Red dye molecules were site-specifically attached to cysteine side chains in the apoprotein and did not interfere with LHCII assembly, function and stability. The dyes transferred their excitation energy virtually completely to the chlorophylls in LHCII, partially filling in the green gap. Thus, organic dyes can be used to increase the absorption cross section and, thus, the light-harvesting efficiency of recombinant LHCII.

  9. Effects of drought stress on chlorophyll fluorescence parameters of two fast-growing tree species%干旱胁迫对2种速生树种叶绿素荧光特性的影响

    Institute of Scientific and Technical Information of China (English)

    白晶晶; 吴俊文; 李吉跃; 何茜; 邱权; 潘昕

    2015-01-01

    Objective] A comparison of drought resistance was made between two fast-growing species in South China, Eucalyptus urophylla ×E.grandis (EE for abbr.) and bamboo willow (BW for abbr.).[Method]Effective quantum yield of PSⅡ photochemistry ( Yield ) , apparent electron transport rate ( ETR) , the photochemical quenching ( qP ) , the non-photochemical quenching ( qN) , minimal fluores-cence(F0), maximal fluorescence(Fm), potential photochemical efficiency of PSⅡ(Fv/Fm) in EE and BW were tested by OS5P pulse modulated chlorophyll fluorometer under drought stress .[Result and con-clusion] Yield, ETR, qP, Fm and Fv/Fm all declined during the drought .At day 24 after treatment, ETR declined by 48.02% and 25.12% EE and BW , respectively.qN and F0 in the 2 species in-creased.qN in BW rose by 217.59%, which was significantly higher than that in EE (146.40%, P<0.05).The relative increment in F0 in BW (49.11%) was smaller than that in EE (92.03%) at the end of the drought treatment .Correlation analyses were made concerning chlorophyll fluorescence charac-teristics and soil water content .In both species , ETR showed a significant positive correlation with soil water content ( P<0.01 ) .F0 in EE showed a significant negative correlation with soil water content (P<0.01).Fm and Fv/Fm of BB and soil water content showed a significant positive correlation (P<0.01).These results indicate that correlations existe among chlorophyll fluorescence characteristics in two species under drought.BW has greater drought resistance than EE as revealed by chlorophyll fluo-rescence characteristics.%目的对华南地区2个速生树种尾巨桉Eucalyptus urophylla × E.grandis和竹柳( bamboo willow )的抗旱性进行比较.方法采用干旱胁迫处理,利用脉冲调制式叶绿素荧光仪( OS5 P-美国)对2树种叶绿素荧光参数进行测定.结果和结论在干旱胁迫条件下,实际光量子产量( Yield)、表观光合电子传递速率( ETR)、

  10. Fluorescence Quenching of Pheo-phytin-a by Copper(Ⅱ)Ions

    Institute of Scientific and Technical Information of China (English)

    HU,Mingbo; LI,Huaixiang; CHEN,Lusheng; ZHANG,Huaibin; DONG,Chuan

    2009-01-01

    A method was developed for determination of Cu(Ⅱ)ions quantitatively by measuring fluorescent intensity of pheophytin-a(Pheoa)solution.The Pheoa was obtained by de-intercalation of magnesium from the porphyrin ring of chlorophyll-a(Chla)extracted from fresh spinach leaves.Its two UV-Vis absorption peaks at 505 and 535 am in acetone solution have been observed but disappeared When the acetone solution of Pheoa was mixed with a Cu(Ⅱ)ion aqueous solution.A fluorescence quenching phenomenon was thus observed when the acetone solution of Pheoa was mixed with an aqueous solution of Cu(Ⅱ)ions.However,other physiologically relevant cations rarely caused any quenching fluorescence of Pheoa under the same experimental conditions.Kinetics of the fluorescence fading process Was investigated by measuring the effects of Cu(Ⅱ)ion concentration,reaction time and reaction temperature on the fluorescence intensity of the Pheoa acetone solution.An activation energy of(10±1)kJ·mol-1 was estimated from Arrhenius empirical relation assuming that the interaction between the Pheoa and the Cu(Ⅱ)ions was the first order reaction.The calibration graph obtained with the fluorescence Was linear over the Cu(Ⅱ)concentration range of 8.0×10-5-8.0×10-7 mol·dm-3 with a detection limit of 8.0×10-7 mool·dm-3 for Cu(Ⅱ)ion.

  11. Fluorescent Approaches to High Throughput Crystallography

    Science.gov (United States)

    Pusey, Marc L.; Forsythe, Elizabeth; Achari, Aniruddha

    2006-01-01

    We have shown that by covalently modifying a subpopulation, less than or equal to 1%, of a macromolecule with a fluorescent probe, the labeled material will add to a growing crystal as a microheterogeneous growth unit. Labeling procedures can be readily incorporated into the final stages of purification, and the presence of the probe at low concentrations does not affect the X-ray data quality or the crystallization behavior. The presence of the trace fluorescent label gives a number of advantages when used with high throughput crystallizations. The covalently attached probe will concentrate in the crystal relative to the solution, and under fluorescent illumination crystals show up as bright objects against a dark background. Non-protein structures, such as salt crystals, will not incorporate the probe and will not show up under fluorescent illumination. Brightly fluorescent crystals are readily found against less bright precipitated phases, which under white light illumination may obscure the crystals. Automated image analysis to find crystals should be greatly facilitated, without having to first define crystallization drop boundaries as the protein or protein structures is all that shows up. Fluorescence intensity is a faster search parameter, whether visually or by automated methods, than looking for crystalline features. We are now testing the use of high fluorescence intensity regions, in the absence of clear crystalline features or "hits", as a means for determining potential lead conditions. A working hypothesis is that kinetics leading to non-structured phases may overwhelm and trap more slowly formed ordered assemblies, which subsequently show up as regions of brighter fluorescence intensity. Preliminary experiments with test proteins have resulted in the extraction of a number of crystallization conditions from screening outcomes based solely on the presence of bright fluorescent regions. Subsequent experiments will test this approach using a wider

  12. Effect of Polyamines,Putrescine,Spermidine and Spermine on Chloro-phyll Fluorescence Parameters of Cucumber Seedlings under Low Tem-perature Stress%外源多胺对低温胁迫下黄瓜幼苗叶绿素荧光参数的影响

    Institute of Scientific and Technical Information of China (English)

    曹玉杰; 钱春桃; 薄凯亮; 程春燕; 陈劲枫

    2014-01-01

    应用外源多胺(Polyamines,PAs)腐胺(Putrescine,Put)、亚精胺(Spermidine,Spd)、精胺(Spermine,Spm)处理2叶1心黄瓜幼苗,然后进行8℃/8℃低温及恢复处理,研究Put、Spd、Spm对黄瓜幼苗叶绿素荧光参数的影响。结果表明,在低温胁迫下黄瓜幼苗叶片叶绿素荧光参数最大荧光Fm、最大光化学效率Fv/Fm、PSII(光系统II)潜在活性Fv/F0均下降,初始荧光F0上升,表明PSII受到了伤害,使得PSII原初光能转换效率、PS潜在活性降低;与单纯低温胁迫相比,外源Put、Spd、Spm预处理均可以提高Fm、Fv/Fm、Fv/F0,而使F0降低。这一结果从叶绿素荧光动力学方面说明Put、Spd、Spm对改善黄瓜的耐冷性有一定的作用。%Cucumber seedlings of two true leaves were sprayed by exogenous PAs (Put,Spd,Spm ) and then they were stressed under low temperature of 8℃/8℃for three days and recovered for one day. Effect of exogenous PAs on the changes of chlorophyll fluorescence parameters of cucumber seedlings under low temperature stress was studied. The results indicat-ed that the fluorescent parameters of chlorophyll, Fm,Fv/Fm and Fv/F0 appeared to decline and F0 appeared to increase, suggesting that PSII could be damaged,causing some decrease of primary light energy conversion and potential activities of PSII. Compared with the control treatment,exogenous PAs pre-treatment could significantly promote the increment of Fm, Fv/Fm,and Fv/F0,whereas decreased F0.The effect of exogenous PAs on cold-tolerance of cucumber is proved again by im-proving the changes of chlorophyll fluorescence parameters of cucumber seedlings.

  13. Mean fluorescence lifetime and its error

    Energy Technology Data Exchange (ETDEWEB)

    Fiserova, Eva [Department of Mathematical Analysis and Applications of Mathematics, Faculty of Science, Palacky University in Olomouc, tr. 17. listopadu 12, CZE-77146 Olomouc (Czech Republic); Kubala, Martin, E-mail: mkubala@prfnw.upol.cz [Department of Biophysics, Faculty of Science, Palacky University in Olomouc, tr. 17. listopadu 12, CZE-77146 Olomouc (Czech Republic)

    2012-08-15

    Mean excited-state lifetime is one of the fundamental fluorescence characteristics and enters as an important parameter into numerous calculations characterizing molecular interactions, such as e.g. FRET or fluorescence quenching. Our experiments demonstrated that the intensity-weighted mean fluorescence lifetime is very robust characteristic, in contrast to the amplitude-weighted one, which value is dependent on the data quality and particularly on the used fitting model. For the first time, we also report the procedure for the error estimation for both the intensity- and amplitude-weighted mean fluorescence lifetimes. Furthermore, we present a method for estimation of the mean fluorescence lifetime directly from the fluorescence-decay curve recorded by TCSPC (Time-Correlated Single-Photon Counting) method. For its simplicity and low computational demands, it could be a useful tool in the high-throughput applications, such as FACS, FLIM-FRET or HPLC detectors. - Highlights: Black-Right-Pointing-Pointer Intensity-weighted mean fluorescence lifetime is very robust characteristic. Black-Right-Pointing-Pointer The amplitude-weighted mean lifetime depends on the selection of fitting model. Black-Right-Pointing-Pointer Rigorous procedure for estimation of confidence intervals for mean lifetime. Black-Right-Pointing-Pointer The mean lifetime can be estimated directly from the TCSPC histogram.

  14. APPLICATION OF MODULATED CHLOROPHYLL FLUORESCENCE AND MODULATED CHLOROPHYLL FLUORESCENCE IMAGING IN STUDYING ENVIRONMENTAL STRESSES EFFECT

    Directory of Open Access Journals (Sweden)

    L. Guidi

    2016-03-01

    Full Text Available Chlorophyll (Chl a fluorescence is a widely used tool to monitor the photosynthetic process in plants subjected to environmental stresses.this review reports the theoretical bases of Chl fluorescence, and the significance of the most important Chl fluorescence parameters. it also reportshow these parameters can be utilised to estimate changes in photosystem ii (PSII photochemistry, linear electron flux and energy dissipationmechanisms. the relation between actual PSII photochemistry and CO2 assimilation is discussed, as is the role of photochemical andnon-photochemical quenching in inducing changes in PSII activity. the application of Chl fluorescence imaging to study heterogeneity on leaflamina is also considered. this review summarises only some of the results obtained by this methodology to study the effects of differentenvironmental stresses, namely water and nutrients availability, pollutants, temperature and salinity.

  15. Spectroscopic evidence of xanthine compounds fluorescence quenching effect on water-soluble porphyrins

    Science.gov (United States)

    Makarska-Bialokoz, Magdalena

    2015-02-01

    The formation of π-stacked complexes between water-soluble porphyrins: 4,4‧,4″,4″‧-(21H,23H-porphine-5,10,15,20-tetrayl)tetrakis-(benzoic acid) (H2TCPP), 5,10,15,20-tetrakis(4-sulfonatophenyl)-21H,23H-porphine (H2TPPS4), 5,10,15,20-tetrakis[4-(trimethylammonio)phenyl]-21H,23H-porphine tetra-p-tosylate (H2TTMePP), 5,10,15,20-tetrakis(1-methyl-4-pyridyl)-21H,23H-porphine tetra-p-tosylate (H2TMePyP), the Cu(II) complexes of H2TTMePP and H2TMePyP, as well as chlorophyll a with xanthine, theophylline (1,3-dimethylxanthine) and theobromine (3,7-dimethylxanthine) has been studied analysing their absorption and steady-state fluorescence spectra in aqueous (or acetone in case of chlorophyll a) solution. During titration by the compounds from xanthine group the bathochromic effect in the porphyrin absorption spectra as well as the hypochromicity of the porphyrin Soret maximum can be noticed. The fluorescence quenching effect observed during interactions in the systems examined suggests the process of static quenching. The association and fluorescence quenching constants are of the order of magnitude of 103 - 102 mol-1. The results obtained show that xanthine and its derivatives can quench the fluorescence of the porphyrins according to the number of methyl groups in the molecule of quencher.

  16. Binding of several benzodiazepines to bovine serum albumin: Fluorescence study

    Science.gov (United States)

    Machicote, Roberta G.; Pacheco, María E.; Bruzzone, Liliana

    2010-10-01

    The interactions of lorazepam, oxazepam and bromazepam with bovine serum albumin (BSA) were studied by fluorescence spectrometry. The Stern-Volmer quenching constants and corresponding thermodynamic parameters Δ H, Δ G and Δ S were calculated. The binding constants and the number of binding sites were also investigated. The distances between the donor (BSA) and the acceptors (benzodiazepines) were obtained according to fluorescence resonance energy transfer and conformational changes of BSA were observed from synchronous fluorescence spectra.

  17. Evaluation of Hyperspectral Multi-Band Indices to Estimate Chlorophyll-A Concentration Using Field Spectral Measurements and Satellite Data in Dianshan Lake, China

    Directory of Open Access Journals (Sweden)

    Linna Li

    2013-04-01

    Full Text Available Chlorophyll-a (Chl-a concentration is considered as a key indicator of the eutrophic status of inland water bodies. Various algorithms have been developed for estimating Chl-a in order to improve the accuracy of predictive models. The objective of this study is to assess the potential of hyperspectral multi-band indices to estimate the Chl-a concentration in Dianshan Lake, which is the largest lake in Shanghai, an international metropolis of China. Based on field spectral measurements and in-situ Chl-a concentration collected on 7–8 September 2010, hyperspectral multi-band indices were calibrated to estimate the Chl-a concentration with optimal wavelengths selected by model tuning. A three-band index accounts for 87.36% (R2 = 0.8736 of the Chl-a variation. A four-band index, which adds a wavelength in the near infrared (NIR region, results in a higher R2 (0.8997 by removing the absorption and backscattering effects of suspended solids. To test the applicability of the proposed indices for routinely monitoring of Chl-a in inland lakes, simulated Hyperion and real HJ-1A satellite data were selected to estimate the Chl-a concentration. The results show that the explanatory powers of these satellite hyperspectral multi-band indices are relatively high with R2 = 0.8559, 0.8945, 0.7969, and 0.8241 for simulated Hyperion and real HJ-1A satellite data, respectively. All of the results provide strong evidence that hyperspectral multi-band indices are promising and applicable to estimate Chl-a in eutrophic inland lakes.

  18. Tracer studies on the incorporation of [2-14C]-DL-mevalonate into chlorophylls a and b, alpha-chaconine, and alpha-solanine of potato sprouts.

    Science.gov (United States)

    Kozukue, N; Tsuchida, H; Friedman, M

    2001-01-01

    Chlorophyll and glycoalkaloids are synthesized in different parts of the potato plant including leaves, tubers, and sprouts. Although light stimulates the biosynthesis of both constituents, the question of whether the two biosynthetic pathways are under the same genetic control has not been resolved. This study investigated the dynamics of incorporation of labeled [2-(14)C]-DL-mavalonate into chlorophyll a, chlorophyll b, and the glycoalkaloids alpha-chaconine and alpha-solanine in potato sprouts after 7 and 14 days of storage in the light and in the dark. No chlorophyll synthesis occurred in the dark. Fractionation of the "glycoalkaloid" extract followed by high-performance liquid chromatography produced four peaks. The fractions were collected and analyzed for radioactivity. About 80% of the radioactivity resided in fraction 1, the composition of which is unknown. Two of the fractions, with 1-14% of the original label, were alpha-chaconine and alpha-solanine. The radioactivity derived from mevalonate largely resides in unidentified compound(s) eluting as a single peak on the HPLC column before the peaks associated with the glycoalkaloids. The specific radioactivity of alpha-chaconine and alpha-solanine increased approximately 2-fold in going from 7 to 14 days of exposure in the light and in the dark. These and additional observations point to the near identity of the dynamics of biosynthesis of the two glycoalkaloids. These data also implicate a non-mevalonate pathway for the synthesis of both chlorophylls and the glycoalkaloids and are consistent with independent genetic control of the concurrent formation of the two classes of compounds during greening of potatoes.

  19. Remote Sensing of the Absorption Coefficients and Chlorophyll a Concentration in the U.S. Southern Middle Atlantic Bight from SeaWiFS and MODIS-Aqua

    Science.gov (United States)

    Pan, Xiaoju; Mannino, Antonio; Russ, Mary E.; Hooker, Stanford B.

    2008-01-01

    At present, satellite remote sensing of coastal water quality and constituent concentration is subject to large errors as compared to the capability of satellite sensors in oceanic waters. In this study, field measurements collected on a series of cruises within U.S. southern Middle Atlantic Bight (SMAB) were applied to improve retrievals of satellite ocean color products in order to examine the factors that regulate the bio-optical properties within the continental shelf waters of the SMAB. The first objective was to develop improvements in satellite retrievals of absorption coefficients of phytoplankton (a(sub ph)), colored dissolved organic matter (CDOM) (a(sub g)), non-pigmented particles (a(sub d)), and non-pigmented particles plus CDOM (a(sub dg)), and chlorophyll a concentration ([Chl_a]). Several algorithms were compared to derive constituent absorption coefficients from remote sensing reflectance (R(sub rs)) ratios. The validation match-ups showed that the mean absolute percent differences (MAPD) were typically less than 35%, although higher errors were found for a(sub d) retrievals. Seasonal and spatial variability of satellite-derived absorption coefficients and [Chl_a] was apparent and consistent with field data. CDOM is a major contributor to the bio-optical properties of the SMAB, accounting for 35-70% of total light absorption by particles plus CDOM at 443 nm, as compared to 30-45% for phytoplankton and 0-20% for non-pigmented particles. The overestimation of [Chl_a] from the operational satellite algorithms may be attributed to the strong CDOM absorption in this region. River discharge is important in controlling the bio-optical environment, but cannot explain all of the regional and seasonal variability of biogeochemical constituents in the SMAB.

  20. Comparing springtime ice-algal chlorophyll a and physical properties of multi-year and first-year sea ice from the Lincoln Sea.

    Science.gov (United States)

    Lange, Benjamin A; Michel, Christine; Beckers, Justin F; Casey, J Alec; Flores, Hauke; Hatam, Ido; Meisterhans, Guillaume; Niemi, Andrea; Haas, Christian

    2015-01-01

    With near-complete replacement of Arctic multi-year ice (MYI) by first-year ice (FYI) predicted to occur within this century, it remains uncertain how the loss of MYI will impact the abundance and distribution of sea ice associated algae. In this study we compare the chlorophyll a (chl a) concentrations and physical properties of MYI and FYI from the Lincoln Sea during 3 spring seasons (2010-2012). Cores were analysed for texture, salinity, and chl a. We identified annual growth layers for 7 of 11 MYI cores and found no significant differences in chl a concentration between the bottom first-year-ice portions of MYI, upper old-ice portions of MYI, and FYI cores. Overall, the maximum chl a concentrations were observed at the bottom of young FYI. However, there were no significant differences in chl a concentrations between MYI and FYI. This suggests little or no change in algal biomass with a shift from MYI to FYI and that the spatial extent and regional variability of refrozen leads and younger FYI will likely be key factors governing future changes in Arctic sea ice algal biomass. Bottom-integrated chl a concentrations showed negative logistic relationships with snow depth and bulk (snow plus ice) integrated extinction coefficients; indicating a strong influence of snow cover in controlling bottom ice algal biomass. The maximum bottom MYI chl a concentration was observed in a hummock, representing the thickest ice with lowest snow depth of this study. Hence, in this and other studies MYI chl a biomass may be under-estimated due to an under-representation of thick MYI (e.g., hummocks), which typically have a relatively thin snowpack allowing for increased light transmission. Therefore, we suggest the on-going loss of MYI in the Arctic Ocean may have a larger impact on ice-associated production than generally assumed.

  1. Identification of light-harvesting chlorophyll a/b-binding protein genes of Zostera marina L. and their expression under different environmental conditions

    Science.gov (United States)

    Kong, Fanna; Zhou, Yang; Sun, Peipei; Cao, Min; Li, Hong; Mao, Yunxiang

    2016-02-01

    Photosynthesis includes the collection of light and the transfer of solar energy using light-harvesting chlorophyll a/b-binding (LHC) proteins. In high plants, the LHC gene family includes LHCA and LHCB sub-families, which encode proteins constituting the light-harvesting complex of photosystems I and II. Zostera marina L. is a monocotyledonous angiosperm and inhabits submerged marine environments rather than land environments. We characterized the Lhca and Lhcb gene families of Z. marina from the expressed sequence tags (EST) database. In total, 13 unigenes were annotated as ZmLhc, 6 in Lhca family and 7 in ZmLhcb family. ZmLHCA and ZmLHCB contained the conservative LHC motifs and amino acid residues binding chlorophyll. The average similarity among mature ZmLHCA and ZmLHCB was 48.91% and 48.66%, respectively, which indicated a high degree of divergence within ZmLHChc gene family. The reconstructed phylogenetic tree showed that the tree topology and phylogenetic relationship were similar to those reported in other high plants, suggesting that the Lhc genes were highly conservative and the classification of ZmLhc genes was consistent with the evolutionary position of Z. marina. Real-time reverse transcription (RT) PCR analysis showed that different members of ZmLhca and ZmLhcb responded to a stress in different expression patterns. Salinity, temperature, light intensity and light quality may affect the expression of most ZmLhca and ZmLhcb genes. Inorganic carbon concentration and acidity had no obvious effect on ZmLhca and ZmLhcb gene expression, except for ZmLhca6.

  2. MOD2SEA: A Coupled Atmosphere-Hydro-Optical Model for the Retrieval of Chlorophyll-a from Remote Sensing Observations in Complex Turbid Waters

    Directory of Open Access Journals (Sweden)

    Behnaz Arabi

    2016-09-01

    Full Text Available An accurate estimation of the chlorophyll-a (Chla concentration is crucial for water quality monitoring and is highly desired by various government agencies and environmental groups. However, using satellite observations for Chla estimation remains problematic over coastal waters due to their optical complexity and the critical atmospheric correction. In this study, we coupled an atmospheric and a water optical model for the simultaneous atmospheric correction and retrieval of Chla in the complex waters of the Wadden Sea. This coupled model called MOD2SEA combines simulations from the MODerate resolution atmospheric TRANsmission model (MODTRAN and the two-stream radiative transfer hydro-optical model 2SeaColor. The accuracy of the coupled MOD2SEA model was validated using a matchup data set of MERIS (MEdium Resolution Imaging SpectRometer observations and four years of concurrent ground truth measurements (2007–2010 at the NIOZ jetty location in the Dutch part of the Wadden Sea. The results showed that MERIS-derived Chla from MOD2SEA explained the variations of measured Chla with a determination coefficient of R2 = 0.88 and a RMSE of 3.32 mg·m−3, which means a significant improvement in comparison with the standard MERIS Case 2 regional (C2R processor. The proposed coupled model might be used to generate a time series of reliable Chla maps, which is of profound importance for the assessment of causes and consequences of long-term phenological changes of Chla in the turbid Wadden Sea area.

  3. Light-intensity-dependent expression of Lhc gene family encoding light-harvesting chlorophyll-a/b proteins of photosystem II in Chlamydomonas reinhardtii.

    Science.gov (United States)

    Teramoto, Haruhiko; Nakamori, Akira; Minagawa, Jun; Ono, Taka-aki

    2002-09-01

    Excessive light conditions repressed the levels of mRNAs accumulation of multiple Lhc genes encoding light-harvesting chlorophyll-a/b (LHC) proteins of photosystem (PS)II in the unicellular green alga, Chlamydomonas reinhardtii. The light intensity required for the repression tended to decrease with lowering temperature or CO(2) concentration. The responses of six LhcII genes encoding the major LHC (LHCII) proteins and two genes (Lhcb4 and Lhcb5) encoding the minor LHC proteins of PSII (CP29 and CP26) were similar. The results indicate that the expression of these Lhc genes is coordinately repressed when the energy input through the antenna systems exceeds the requirement for CO(2) assimilation. The Lhc mRNA level repressed under high-light conditions was partially recovered by adding the electron transport inhibitor 3-(3,4-dichlorophenyl)-1,1-dimethylurea, suggesting that redox signaling via photosynthetic electron carriers is involved in the gene regulation. However, the mRNA level was still considerably lower under high-light than under low-light conditions even in the presence of 3-(3,4-dichlorophenyl)-1,1-dimethylurea. Repression of the Lhc genes by high light was prominent even in the mutants deficient in the reaction center(s) of PSII or both PSI and PSII. The results indicate that two alternative processes are involved in the repression of Lhc genes under high-light conditions, one of which is independent of the photosynthetic reaction centers and electron transport events.

  4. Vertical Patterns of Early Summer Chlorophyll a Concentration in the Indian Ocean with Special Reference to the Variation of Deep Chlorophyll Maximum

    Directory of Open Access Journals (Sweden)

    Gang Li

    2012-01-01

    Full Text Available Vertical patterns of early summer chlorophyll a (Chl a concentration from the Indian Ocean are presented, as well as the variations of depth and size-fractioned Chl a in the deep chlorophyll maximum (DCM. A total of 38 stations were investigated from 12 April to 5 May 2011, with 8 discrete-depth samples (7 fixed and 1 variable at real DCM measured at each station. Depth-integrated Chl a concentration (∑Chl a varied from 11.5 to 26.8 mg m−2, whereas Chl a content at DCM ranged from 0.17 to 0.57 μg L−1 with picophytoplankton (<3 μm accounting for 82% to 93%. The DCM depth varied from 55.6 to 91 m and shoaled latitudinally to northward. Moreover, our results indicated that the ∑Chl a could be underestimated by up to 9.3% with a routine sampling protocol of collecting samples only at 7 fixed depths as the real DCM was missed. The underestimation was negatively correlated to the DCM depth when it varied from 55.6 to 71.3 m (r=−0.63, P<0.05 but positively correlated when it ranged from 75.8 to 91 m (r=0.68, P<0.01. This indicates that in the Indian Ocean the greater the departure of the DCM from 75 m depth, the greater the underestimation of integrated Chl a concentration that could occur if the real DCM is missed.

  5. The potential impact of an inter-basin water transfer project on nutrients (nitrogen and phosphorous) and chlorophyll a of the receiving water system.

    Science.gov (United States)

    Zeng, Qinghui; Qin, Lihuan; Li, Xuyong

    2015-12-01

    Any inter-basin water transfer project would cause complex physical, chemical, hydrological and biological changes to the receiving system. The primary channel of the middle route of the South-to-North Water Transfer Project has a total length of 1267 km. There is a significant difference between the physical, chemical and biological characteristics of the originating and receiving drinking water conservation districts. To predict the impacts of this long-distance inter-basin water transfer project on the N&P (nitrogen and phosphorus) concentrations and eutrophication risk of the receiving system, an environmental fluid dynamics code (EFDC) model was applied. The calibrated model accurately reproduced the hydrodynamic, water quality and the entire algal bloom process. Thirteen scenarios were defined to fully understand the N&P and chlorophyll a (Chl a) variation among different hydrological years, different quantity and timing of water transfer, and different inflows of N&P concentrations. The results showed the following: (a) The water transfer project would not result in a substantial difference to the trophic state of the Miyun reservoir in any of the hydrological years. (b) The area affected by the water transfer did not involve the entire reservoir. To minimize the impact of water transfer on N&P nutrients and Chl a, water should be transferred as uniform as possible with small discharge. (c) The variation in Chl a was more sensitive to an increase in P than an increase in N for the transferred water. The increased percentages of the average Chl a concentration when water was transferred in the spring, summer and autumn were 7.76%, 16.67% and 16.45%. Our findings imply that special attention should be given to prevent P increment of the transferred water from May to October to prevent algal blooms. The results provide useful information for decision makers about the quantity and timing of water transfers.

  6. Assessment of chlorophyll-a variations in high- and low-flow seasons in Apalachicola Bay by MODIS 250-m remote sensing.

    Science.gov (United States)

    Huang, Wenrui; Chen, Shuisen; Yang, Xiaojun; Johnson, Elijah

    2014-12-01

    Chlorophyll-a (chl-a) is considered as a primary indicator for water quality and foods for oyster growth in Apalachicola estuarine ecosystem. Assessment of chl-a concentration variation in response to river inflow is important for estuarine environmental research and management. In this study, remote sensing analysis has been conducted to evaluate the effects of river inflow on chlorophyll concentrations in Apalachicola Bay of Florida in the northeast Gulf of Mexico. A remote sensing model for chl-a was improved and applied to map spatial distributions of chl-a by using Moderate Resolution Imaging Spectroradiometer (MODIS) 250-m resolution imageries in high-flow and low-flow seasons in 2001 and 2008. Chl-a values approximately ranged from the minimum 6 μg/l to the maximum 29 μg/l in the study period. Maximum chl-a concentration in high-flow season was almost twice above that in low-flow season. The averaged mean and minimum chl-a level in the high-flow season were approximately 42 and 28 % higher than those in low-flow season, respectively. The remote sensing mapping of chl-a was able to show spatial variations of chl-a in the entire bay under different flow conditions, which indicated its advantage over the traditional field data sampling for monitoring water quality over a large area of estuary. The MODIS 250-m remote sensing regression model presented from this study can be used to support monitoring and assessment of the spatial chl-a distribution in the bay for environmental research and management in Apalachicola Bay.

  7. Allelic variations of a light harvesting chlorophyll a/b-binding protein gene (Lhcb1 associated with agronomic traits in barley.

    Directory of Open Access Journals (Sweden)

    Yanshi Xia

    Full Text Available Light-harvesting chlorophyll a/b-binding protein (LHCP is one of the most abundant chloroplast proteins in plants. Its main function is to collect and transfer light energy to photosynthetic reaction centers. However, the roles of different LHCPs in light-harvesting antenna systems remain obscure. Exploration of nucleotide variation in the genes encoding LHCP can facilitate a better understanding of the functions of LHCP. In this study, nucleotide variations in Lhcb1, a LHCP gene in barley, were investigated across 292 barley accessions collected from 35 different countries using EcoTILLING technology, a variation of the Targeting Induced Local Lesions In Genomes (TILLING. A total of 23 nucleotide variations were detected including three insert/deletions (indels and 20 single nucleotide polymorphisms (SNPs. Among them, 17 SNPs were in the coding region with nine missense changes. Two SNPs with missense changes are predicted to be deleterious to protein function. Seventeen SNP formed 31 distinguishable haplotypes in the barley collection. The levels of nucleotide diversity in the Lhcb1 locus differed markedly with geographic origins and species of accessions. The accessions from Middle East Asia exhibited the highest nucleotide and haplotype diversity. H. spontaneum showed greater nucleotide diversity than H. vulgare. Five SNPs in Lhcb1 were significantly associated with at least one of the six agronomic traits evaluated, namely plant height, spike length, number of grains per spike, thousand grain weight, flag leaf area and leaf color, and these SNPs may be used as potential markers for improvement of these barley traits.

  8. Fluorescence of anthocyanin pigments in plant extracts at various pH

    Science.gov (United States)

    Pliszka, Barbara; Olszewska, Teresa; Drabent, Regina

    2001-07-01

    The fluorescence properties of anthocyanin pigments in extracts of red cabbage, Brassica oleracea, have been studied. The fluorescence spectra and fluorescence excitation spectra have been measured with absorption spectra of anthocyanins in extracts at pH 2 and pH 7. The results of the researches show that kinds of fluorescent anthocyanins (or/and other compounds) depend on pH conditions of red cabbage extracts. The properly chosen parameters of fluorescence measurement allow to distinguish spectrally two different fluorescent anthocyanin compounds in extract at pH 2 in comparison to pH 7, where three fluorescent compounds have been found.

  9. Performance of the fluorescence detectors of the pierre auger observatory

    Energy Technology Data Exchange (ETDEWEB)

    Bellido, Jose A.; /Adelaide U.

    2005-08-01

    Fluorescence detectors of the Pierre Auger Observatory have been operating in a stable manner since January 2004. After a brief review of the physical characteristics of the detectors, the associated atmospheric monitoring, the calibration infrastructure and the detector aperture, we will describe the steps required for the reconstruction of fluorescence event data, with emphasis on the shower profile parameters and primary energy.

  10. Water-quality assessment of part of the Upper Mississippi River Basin Study Unit, Minnesota and Wisconsin- Nutrients, chlorophyll a, phytoplankton, and suspended sediment in streams, 1996-98

    Science.gov (United States)

    Kroening, Sharon E.; Lee, Kathy E.; Goldstein, R.M.

    2003-01-01

    Stream water-quality data from part of the Upper Mississippi River Basin Study Unit (Study Unit) from 1995 through 1998 was used to describe the distribution of nutrients, chlorophyll a, phytoplankton, and suspended sediment; and the influence of natural and anthropogenic factors on reported concentrations, loads, and yields. During the study period, streamflows generally were near to greater than average. Agricultural land cover, particularly on tile-drained soils, had the most substantial influence on nutrients, chlorophyll a, and suspended sediment in the Study Unit. The greatest concentrations and yields of total nitrogen, dissolved nitrite plus nitrate nitrogen, dissolved nitrite nitrogen, total organic plus ammonia nitrogen, total phosphorus, and suspended sediment were measured in a stream representing agricultural land cover on tile-drained soils. Total nitrogen yields also were about 6 times greater in a stream representing agricultural land cover on tile-drained soils than in a stream representing agricultural land cover on naturally welldrained soils.

  11. Fluorescence antibunching microscopy

    CERN Document Server

    Schwartz, Osip

    2011-01-01

    Breaking the diffraction limit in microscopy by utilizing quantum properties of light has been the goal of intense research in the recent years. We propose a quantum superresolution technique based on non-classical emission statistics of fluorescent markers, routinely used as contrast labels for bio-imaging. The technique can be readily implemented using standard fluorescence microscopy equipment.

  12. LEDs for fluorescence microscopy

    NARCIS (Netherlands)

    Young, I.T.; Garini, Y.; Dietrich, H.R.C.; Van Oel, W.; Liqui Lung, G.

    2004-01-01

    Traditional light sources for fluorescence microscopy have been mercury lamps, xenon lamps, and lasers. These sources have been essential in the development of fluorescence microscopy but each can have serious disadvantages: lack of near monochromaticity, heat generation, cost, lifetime of the light

  13. Fluorescence of atopic allergens

    NARCIS (Netherlands)

    Berrens, L.

    1967-01-01

    Purified atopic allergens have been found to emit flue fluorescence upon irradiation with ultraviolet light of 365 mμ wavelength. The maximum of fluorescence is in the region 445–490 mμ and the intensity is of the same order of magnitude for different atopic allergens. Synthetic model compounds, inc

  14. Effect of carbon and nitrogen assimilation on chlorophyll fluorescence emission by the cyanobacterium Anacystis nidulans

    Energy Technology Data Exchange (ETDEWEB)

    Romero, J.M.; Lara, C. (Instituto de Bioquimica Vegetal y Fotosintesis, Univ. de Sevilla y CSIC, Sevilla (ES)); Sivak, M.N. (Dept. of Biochemistry, Michigan State Univ., East Lansing (US))

    1992-01-01

    O{sub 2} evolution and chlorophyll A fluorescence emission have been monitored in intact cells of the cyanobacterium Anacystis nidulans 1402-1 to study the influence of carbon and nitrogen assimilation on the operation of the photosynthetic apparatus. The pattern of fluorescence induction in dark-adapted cyanobacterial cells was different from that of higher plants. Cyanobacteria undergo large, rapid state transitions upon illumination, which lead to marked changes in the fluorescence yield, complicating the estimation of quenching coefficients. The Kautsky effect was not evident, although it could be masked by a state II-state I transition, upon illumination with actinic light. The use of inhibitors of carbon assimilation such as D,L-glyceraldehyde or iodoacetamide allowed us to relate changes in variable fluorescence to active CO{sub 2} fixation. Ammonium, but not nitrate, induced non-photochemical fluorescence quenching, in agreement with a previous report on green algae, indicative of an ammonium-induced state i transition. (au).

  15. COMPARACIÓN DE LA ESTIMACIÓN DE LA CLOROFILA-a MEDIANTE LOS MÉTODOS ESPECTROFOTOMÉTRICO Y FLUOROMÉTRICO Comparation of Spectrophotometric and Fluorometric Measurements of Chlorophyll-a

    Directory of Open Access Journals (Sweden)

    CARLOS RIVERA R.

    Full Text Available En cuatro ecosistemas acuáticos de montaña del altiplano Cundiboyacense, Colombia, se compararon mediante un análisis de regresión los datos de clorofila-a obtenidos a partir de los métodos espectrofotométrico (fórmula tricromática y fluorométrico (método de Welschmeyer. El análisis demostró que el método espectrofotométrico sobreestimó la concentración de clorofila-a , pero se puede utilizar con precaución en ambientes de baja trofia. Se halló una ecuación que permite relacionar las medidas de clorofila-a obtenidas con las dos metodologías.In four mountain aquatic ecosystems of altiplano Cundiboyacense, Colombia, we compared through analysis regression data set of chlorophyll-a obtained with spectorophotometric (tricromatic formula and fluorometric (Welschmeyer methods. The analysis showed that the spectrophotometric method overestimated the chlorophyll-a concentration, but it could be used with precaution in the lower trophic environments. An equation that relates the two chlorophyll-a measures was obtained.

  16. Interannual variability in temporal patterns of Chlorophyll-a and their potential influence on the supply of mussel larvae to inner waters in northern Patagonia (41-44°S)

    Science.gov (United States)

    Lara, Carlos; Saldías, Gonzalo S.; Tapia, Fabian J.; Iriarte, José Luis; Broitman, Bernardo R.

    2016-03-01

    Environmental forcing of biophysical processes can have deep influences on patterns of supply of planktonic larvae to benthic communities in coastal marine ecosystems. We investigated the role of environmental forcing following a recent interannual decrease in larval supply in the Inner Sea of Chiloé (41-45°S) using direct observations and environmental time series over the period 2003-2014. To examine the temporal structure of larval supply and potential associations with environmental forcing (approximated using satellite chlorophyll-a and sea surface temperature), we used wavelet analysis and lagged correlations to test the hypothesis of an association between larval availability and changes in the seasonal cycle of chlorophyll-a concentration, sea surface temperature, and relevant climate variability (Pacific Decadal Oscillation, El Niño-Southern Oscillation and Southern Annular Mode). Our results indicate that a weakening in the annual cycle of chlorophyll-a concentration and abnormally cold sea surface temperature during 2009-2010 can be related to the observed disruption in larval supply to the Inner Sea of Chiloé starting during the 2010-2011 season. The potential influence of climate variability is further discussed as the spatial extent and temporal persistence observed suggest that other ecological processes might have also been affected, and consequently, we suggest a link to transient large-scale climatic forcing.

  17. 湖泊富营养化因子对叶绿素a影响的SEM分析%Influences of Lake Eutrophication Factors on Chlorophyll a Using Structural Equation Model

    Institute of Scientific and Technical Information of China (English)

    刘巧红; 张浩; 吴开亚; 刘丽

    2012-01-01

    Taking Chaohu Lake basin for an example, this paper analyzes the influences of eutrophication factors on chlorophyll a by using structural equation model (SEM). According to the mechanism of lake eutrophication, four intrinsic variables including physical factors, nutrients, organism and phytoplankton are introduced in this model. Along with five eutrophication factors, the SEM-based eutrophication model is established. The results show that the SEM-based model demonstrates the relationship between eutrophication factors and chlorophyll a, and it can directly predict the concentration of chlorophyll a with combination of other methods.%根据湖泊富营养化成因机理,采用结构方程模型(SEM),引入物理环境、有机物、营养盐和浮游植物4个潜变量,并结合选取的5个影响因子,建立了富营养化结构方程模型,以便模拟各因子对巢湖流域南淝河入巢湖口水体中叶绿素a的影响.结果表明,该模型揭示了富营养化各要素与叶绿素a之间的复杂关系,与其他方法相结合可直接预测叶绿素a的浓度.

  18. Comparation of Spectrophotometric and Fluorometric Measurements of Chlorophyll-a Comparación de la estimación de la Clorofila-a mediante los métodos espectrofotométrico y fluorométrico

    Directory of Open Access Journals (Sweden)

    Jiménez Paola

    2005-12-01

    Full Text Available In four mountain aquatic ecosystems of altiplano Cundiboyacense, Colombia, we compared through analysis regression data set of chlorophyll-a obtained with spectoropho-tometric (tricromatic formula and fluorometric (Welschmeyer methods. The analysis showed that the spectrophotometric method overestimated the chlorophyll-a concen-tration, but it could be used with precaution in the lower trophic environments. An equation that relates the two chlorophyll-a measures was obteined.En cuatro ecosistemas acuáticos de montaña del altiplano Cundiboyacense, Colombia, se compararon mediante un análisis de regresión los datos de clorofila-a obtenidos a partir de los métodos espectrofotométrico (fórmula tricromática y fluorométrico
    (método de Welschmeyer. El análisis demostró que el método espectrofotométrico sobreestimó la concentración de clorofila-a, pero se puede utilizar con precaución en ambientes de baja trofia. Se halló una ecuación que permite relacionar las medidas de clorofila-a obtenidas con las dos metodologías.

  19. Zooplankton community composition of high mountain lakes in the Tatra Mts., the Alps in North Tyrol, and Scotland: relationship to pH, depth, organic carbon, and chlorophyll-a concentration

    Directory of Open Access Journals (Sweden)

    Skála Ivan

    2015-10-01

    Full Text Available The European EMERGE (European Mountain lake Ecosystems: Regionalisation, diaGnostic & socio-economic Evaluation project was a survey of high mountain lakes (above treeline across Europe using unified methods of sampling and analysis. The sampling was carried out in summer or autumn 2000, and comprised biological samples, and samples for chemical analysis. Data from three lake districts are used in this paper: the Tatra Mts. in Slovakia and Poland (45 lakes, the Alps in Tyrol in Austria (22 lakes, and Scotland (30 lakes. As it is shown by multiple regression analysis, DTOC (dissolved or total organic carbon is the key variable for most groups of zooplankton. With increasing DTOC and mostly with chlorophyll-a decreasing, pH increasing and depth decreasing, macrofitrators with coarse filter meshes are replaced by microfiltrators with fine filter meshes. Higher DTOC may increase bacterioplankton production and advantage species able to consume bacteria (microfiltrators. Other zooplankton species also differ in their preference for DTOC, chlorophyll-a, pH and depth, but DTOC being positively correlated with chlorophyll-a and pH positively correlated with depth. It may be caused by their different preference for food quality in terms of C:P ratio.

  20. Parameter Estimation

    DEFF Research Database (Denmark)

    Sales-Cruz, Mauricio; Heitzig, Martina; Cameron, Ian;

    2011-01-01

    of optimisation techniques coupled with dynamic solution of the underlying model. Linear and nonlinear approaches to parameter estimation are investigated. There is also the application of maximum likelihood principles in the estimation of parameters, as well as the use of orthogonal collocation to generate a set...

  1. Articulatory Parameters.

    Science.gov (United States)

    Ladefoged, Peter

    1980-01-01

    Summarizes the 16 parameters hypothesized to be necessary and sufficient for linguistic phonetic specifications. Suggests seven parameters affecting tongue shapes, three determining the positions of the lips, one controlling the position of the velum, four varying laryngeal actions, and one controlling respiratory activity. (RL)

  2. Horizontal and Vertical Distributions of Transparent Exopolymer Particles (TEP) in the NW Mediterranean Sea Are Linked to Chlorophyll a and O2 Variability

    Science.gov (United States)

    Ortega-Retuerta, Eva; Sala, Maria M.; Borrull, Encarna; Mestre, Mireia; Aparicio, Fran L.; Gallisai, Rachele; Antequera, Carolina; Marrasé, Cèlia; Peters, Francesc; Simó, Rafel; Gasol, Josep M.

    2017-01-01

    Transparent Exopolymer Particles (TEP) are relevant in particle and carbon fluxes in the ocean, and have economic impact in the desalination industry affecting reverse osmosis membrane fouling. However, general models of their occurrence and dynamics are not yet possible because of the poorly known co-variations with other physical and biological variables. Here, we describe TEP distributions in the NW Mediterranean Sea during late spring 2012, along perpendicular and parallel transects to the Catalan coast. The stations in the parallel transect were sampled at the surface, while the stations in the perpendicular transect were sampled from the surface to the bathypelagic, including the bottom nepheloid layers. We also followed the short-term TEP dynamics along a 2-day cycle in offshore waters. TEP concentrations in the area ranged from 4.9 to 122.8 and averaged 31.4 ± 12.0 μg XG eq L−1. The distribution of TEP measured in transects parallel to the Catalan Coast correlated those of chlorophyll a (Chla) in May but not in June, when higher TEP-values with respect to Chla were observed. TEP horizontal variability in epipelagic waters from the coast to the open sea also correlated to that of Chla, O2 (that we interpret as a proxy of primary production) and bacterial production (BP). In contrast, the TEP vertical distributions in epipelagic waters were uncoupled from those of Chla, as TEP maxima were located above the deep chlorophyll maxima. The vertical distribution of TEP in the epipelagic zone was correlated with O2 and BP, suggesting combined phytoplankton (through primary production) and bacterial (through carbon reprocessing) TEP sources. However, no clear temporal patterns arose during the 2-day cycle. In meso- and bathypelagic waters, where phytoplanktonic sources are minor, TEP concentrations (10.1 ± 4.3 μg XG eq l−1) were half those in the epipelagic, but we observed relative TEP increments coinciding with the presence of nepheloid layers. These TEP

  3. Horizontal transport and seasonal distribution of nutrients, dissolved oxygen and chlorophyll -a in the Gulf of Nicoya, Costa Rica: a tropical estuary

    Science.gov (United States)

    Kress, Nurit; Coto, Sandra Leon; Brenes, Carlos L.; Brenner, Stephen; Arroyo, Guillermo

    2002-01-01

    The distributions of salinity, temperature, nutrients, dissolved oxygen and chlorophyll -a (chl -a) concentrations in the Gulf of Nicoya, Costa Rica, during the rainy and dry seasons are presented. In the rainy season, the entire Gulf is strongly stratified due to high riverine discharge; surface temperature decreases and salinity increases towards the sea and most of the Gulf is undersaturated with dissolved oxygen. In the dry season, the Gulf is still stratified although without the strong fresh water signal identified in the rainy season. The lowest surface temperatures appear in the middle of the Gulf whilst the salinity generally decreases towards the upper Gulf. Only the deep waters (below 30 m depth) are undersaturated with dissolved oxygen. In the lower Gulf, oversaturation reaches up to 134% at the surface. The concentration of Si(OH) 4 in the Gulf is much higher during the rainy season than in the dry season, whilst PO 4 is not seasonally dependent. Surficial concentrations of NO 3+NO 2 in the upper Gulf are higher in the dry season than in the rainy season; whilst in most of the lower Gulf, the concentrations are lower in the dry season. Surficial chl -a concentrations in the Gulf are higher in the rainy season, in particular, close to the Tarcoles outflow. A three-component mixing diagram describes the spatial distribution of the nutrients, during both seasons. Riverine waters from the Tempisque (high nutrients and low salinity) are mixed with surface waters from the lower Gulf (higher salinity and lower nutrients). The resulting water then mixes with oceanic water. Salinity in relation to PO 4 is seasonally dependent in the upper Gulf; the riverine end member during the dry season is higher, by a factor of 4, than during the rainy season. There is a significant correlation between NO 3+NO 2 and salinity only during the dry season in the upper Gulf; this is probably a result of phytoplankton consumption of N, in the rainy season. The calculated NO 3+NO

  4. A minimal peach type II chlorophyll a/b-binding protein promoter retains tissue-specificity and light regulation in tomato

    Directory of Open Access Journals (Sweden)

    Scorza Ralph

    2007-08-01

    Full Text Available Abstract Background Promoters with tissue-specificity are desirable to drive expression of transgenes in crops to avoid accumulation of foreign proteins in edible tissues/organs. Several photosynthetic promoters have been shown to be strong regulators of expression of transgenes in light-responsive tissues and would be good candidates for leaf and immature fruit tissue-specificity, if expression in the mature fruit were minimized. Results A minimal peach chlorophyll a/b-binding protein gene (Lhcb2*Pp1 promoter (Cab19 was isolated and fused to an uidA (β-glucuronidase [GUS] gene containing the PIV2 intron. A control vector carrying an enhanced mas35S CaMV promoter fused to uidA was also constructed. Two different orientations of the Cab19::GUS fusion relative to the left T-DNA border of the binary vector were transformed into tomato. Ten independent regenerants of each construct and an untransformed control line were assessed both qualitatively and quantitatively for GUS expression in leaves, fruit and flowers, and quantitatively in roots. Conclusion The minimal CAB19 promoter conferred GUS activity primarily in leaves and green fruit, as well as in response to light. GUS activity in the leaves of both Cab19 constructs averaged about 2/3 that observed with mas35S::GUS controls. Surprisingly, GUS activity in transgenic green fruit was considerably higher than leaves for all promoter constructs; however, in red, ripe fruit activities were much lower for the Cab19 promoter constructs than the mas35S::GUS. Although GUS activity was readily detectable in flowers and roots of mas35S::GUStransgenic plants, little activity was observed in plants carrying the Cab19 promoter constructs. In addition, the light-inducibility of the Cab19::GUS constructs indicated that all the requisite cis-elements for light responsiveness were contained on the Cab19 fragment. The minimal Cab19 promoter retains both tissue-specificity and light regulation and can be used to

  5. Physical forcing mechanisms controlling the variability of chlorophyll-a over the Royal-Charlotte and Abrolhos Banks-Eastern Brazilian Shelf.

    Directory of Open Access Journals (Sweden)

    Renato David Ghisolfi

    Full Text Available The Abrolhos Bank is part of the so-called Eastern Brazilian Shelf and is an area of high ecological and economic importance. The bank supports the largest and richest coral reefs in the South Atlantic and the largest rhodolith bed in the world. The spatial and seasonal variation of phytoplankton concentration, however, and the dynamic processes controlling that variability have remained poorly known. The present study investigates the seasonal and spatial distributions of chlorophyll-a (Chl-a and water conditions by analyzing nine years (2003-2011 of level-3 Moderate-resolution Imaging Spectroradiometer (MODIS derived Chl-a, National Centers for Environmental Prediction (NCEP/ETA model-derived winds, NCEP model-derived heat fluxes, thermohaline and velocity results from the Hybrid Circulation Ocean Model (HYCOM 1/12o assimilated simulation. The results show that low/high concentrations occurred in austral spring-summer (wet season/autumn-winter (dry season, with the highest values observed in the northern portion of the Abrolhos Bank. The typical meteorological and oceanographic conditions during austral summer favor the development of strong stratification. These conditions are 1 N-NE winds that favor an upwelling-type Ekman circulation; 2 coupling between the open ocean and the continental shelf through the western boundary current, which promotes cooler subsurface water to rise onto the shelf break; and 3 positive net heat flux. In contrast, the S-SE winds during autumn are in the opposite direction of the predominant current system over the Abrolhos Bank, thus reducing their speed and inducing an inverse shear. The warmer ocean and a somewhat cool and dry atmosphere promote the evaporative cooling of the surface layer. The above processes drive mixed layer cooling and deepening that reaches its maximum in winter. The blooming of phytoplankton in the Abrolhos Bank waters appears to be regulated by changes in the mixed layer depth, with Chl

  6. A Novel approach to monitor chlorophyll-a concentration using an adaptive model from MODIS data at 250 metres spatial resolution

    Science.gov (United States)

    El Alem, A.; Chokmani, K.; Laurion, I.; El Adlouni, S.

    2013-12-01

    Occurrence and extent of Harmful Algal Bloom (HAB) has increased in inland water bodies around the world. The appearance of these blooms reflects the advanced state of eutrophication of several aquatic systems caused by urban, agricultural, and industrial development. Algal blooms, especially those cyanobacterial origins, are capable to produce and release toxins, threatening human and animal health, quality of drinking water, and recreational water bodies. Conventional monitoring networks, based on infrequent sampling in a few fixed monitoring stations, cannot provide the information needed as HABs are spatially and temporally heterogeneous. Remote sensing represents an interesting alternative to provide the required spatial and temporal coverage. The usefulness of air-borne and satellite remote sensing data to detect HABs was demonstrated since three decades ago, and since several empirical and semi-empirical models, using satellite imagery, were developed to estimate chlorophyll-a concentration [Chl-a] as a proxy to detect bloom proliferations. However, most of those models presented several weaknesses that are generally linked to the range of [Chl-a] to be estimated. Indeed, models originally calibrated for high [Chl-a] fail to estimate low concentrations and vice versa. In this study, an adaptive model to estimate [Chl-a], spread over a wide range of concentrations, is developed for optically complex inland water bodies based on combination of water spectral response classification and three developed semi-empirical algorithms using a multivariate regression. Three distinct water types (low, medium, and high [Chl-a]) are first identified using the Classification and Regression Tree (CART) method performed on remote sensing reflectance over a dataset of 44 [Chl-a] samples collected from Lakes over Quebec province. Based on the water classification, a specific multivariate model to each water type is developed using the same dataset and the MODIS data at 250-m

  7. Fluorescence and Spectral Imaging

    Directory of Open Access Journals (Sweden)

    Ralph S. DaCosta

    2007-01-01

    Full Text Available Early identification of dysplasia remains a critical goal for diagnostic endoscopy since early discovery directly improves patient survival because it allows endoscopic or surgical intervention with disease localized without lymph node involvement. Clinical studies have successfully used tissue autofluorescence with conventional white light endoscopy and biopsy for detecting adenomatous colonic polyps, differentiating benign hyperplastic from adenomas with acceptable sensitivity and specificity. In Barrett's esophagus, the detection of dysplasia remains problematic because of background inflammation, whereas in the squamous esophagus, autofluorescence imaging appears to be more dependable. Point fluorescence spectroscopy, although playing a crucial role in the pioneering mechanistic development of fluorescence endoscopic imaging, does not seem to have a current function in endoscopy because of its nontargeted sampling and suboptimal sensitivity and specificity. Other point spectroscopic modalities, such as Raman spectroscopy and elastic light scattering, continue to be evaluated in clinical studies, but still suffer the significant disadvantages of being random and nonimaging. A recent addition to the fluorescence endoscopic imaging arsenal is the use of confocal fluorescence endomicroscopy, which provides real-time optical biopsy for the first time. To improve detection of dysplasia in the gastrointestinal tract, a new and exciting development has been the use of exogenous fluorescence contrast probes that specifically target a variety of disease-related cellular biomarkers using conventional fluorescent dyes and novel potent fluorescent nanocrystals (i.e., quantum dots. This is an area of great promise, but still in its infancy, and preclinical studies are currently under way.

  8. 盐碱胁迫对2个葡萄品种光合及荧光特征的影响%Saline-alkaline Stress on Photosynthesis, Chlorophyll a Fluorescence of Two Cultivars of Grape

    Institute of Scientific and Technical Information of China (English)

    彭羽; 薛达元; 李熙萌; 王艳杰; 马帅; 冯金朝

    2012-01-01

    Soil salinization and alkalization is a worldwide problem limit productivity of horticultural crops.Many studies have focused on responses of crop to either salt or alkaline stress.However,seldom have studies focused on the effects of this mixed stress.In our experiment in Yinchuan,Northern China,the mixtures of three salts (NaCl,Na2SO4,Na2CO3 with proportion of 1∶0.5 ∶ 0.5) in various concentrations (0,100,200,400 mmol/L) were used to simulate a range of soil natural salt-alkaline conditions.Three-year-old seedlings of two grape cultivars,Crimson (CRS) and Moldova (MDW),widely spread in the world,were planted in open field conditions under the treatments.The results indicate that light saline-alkaline treatments enhanced the photosynthetic capability in two grape cultivars.For the high concentration,net photosynthetic rate (Pn) and stomatal conductance (Gs) of CRS or MDW increased.In Pn light response curves,the same tendency was observed.For CRS,the increase of Pn benefited from high Gs and transpiration rate (Tr),however,a low Fv/Fm decreased such impacts.For MDW,high Fv/Fm helpfully maintain a relatively stable Pn.The two cultivars demonstrated different suitability regime to saline-alkaline stress.%土壤盐碱胁迫是限制作物生产力的世界性问题.很多研究关注盐分胁迫或者碱胁迫单因子对作物的影响,盐碱混合胁迫的研究较少.本研究按照研究区自然土壤盐碱主要成分和组成比例(NaCl、Na2SO4 、Na2CO3质量混合比例为1∶0.5∶0.5),设置了不同浓度的盐碱处理(0,100,200,400 mmol/L),模拟无胁迫、轻度胁迫、中度胁迫和重度胁迫.试验材料为2个葡萄品种克瑞生和摩尔多瓦的3年生实生苗.研究结果表明,轻度盐碱处理能在一定程度上改善2个品种的光合能力.高浓度盐碱胁迫条件下,两品种的净光合速率和气孔导度数值均比对照提高,光合-光响应曲线趋势表现一致.对于克瑞生,光合速率的提高得益于气孔导度和蒸腾速率的提高,但是较低的PSⅡ光化学效率降低了这种惠益.对于摩尔多瓦,较高的PSⅡ光化学效率帮助了其保持较为稳定的净光合速率.2个品种显示了对盐碱胁迫的不同适应性机制.

  9. Highly thermostable fluorescent proteins

    Science.gov (United States)

    Bradbury, Andrew M.; Waldo, Geoffrey S.; Kiss, Csaba

    2011-03-22

    Thermostable fluorescent proteins (TSFPs), methods for generating these and other stability-enhanced proteins, polynucleotides encoding such proteins, and assays and method for using the TSFPs and TSFP-encoding nucleic acid molecules are provided. The TSFPs of the invention show extremely enhanced levels of stability and thermotolerance. In one case, for example, a TSFP of the invention is so stable it can be heated to 99.degree. C. for short periods of time without denaturing, and retains 85% of its fluorescence when heated to 80.degree. C. for several minutes. The invention also provides a method for generating stability-enhanced variants of a protein, including but not limited to fluorescent proteins.

  10. 利用高光谱植被指数监测紧凑型玉米叶绿素荧光参数Fv/Fm%Monitoring the Chlorophyll Fluorescence Parameter Fv/Fm in Compact Corn Based on Different Hyperspectral Vegetation Indices

    Institute of Scientific and Technical Information of China (English)

    谭昌伟; 黄文江; 金秀良; 王君婵; 童璐; 王纪华; 郭文善

    2012-01-01

    为进一步评价遥感监测紧凑型玉米叶绿素荧光参数Fv/Fm的可行性,通过开展小区紧凑型玉米试验,分析紧凑型玉米整个生育期Fv/Fm与高光谱植被指数的相关关系,建立紧凑型玉米Fv/Fm高光谱监测模型.结果表明,紧凑型玉米Fv/Fm与选取的高光谱植被指数均呈极显著正相关,其中结构敏感色素指数(SIPI)与Fv/Fm的相关性最好,相关系数(r)为0.88.用SIPI建立紧凑型玉米Fv/Fm的监测模型,其决定系数(R2)为0.812 6,均方根误差(RMSE)为0.082.研究表明,利用高光谱植被指数可以有效地监测紧凑型玉米整个生育期的Fv/Fm.%In order to further assess the feasibility of monitoring the chlorophyll fluorescence parameter Fv/Fm in compact corn by hyperspectral remote sensing data, in the present study, hyperspectral vegetation indices from in-situ remote sensing measurements were utilized to monitor the chlorophyll fluorescence parameter Fv/Fm measured in the compact corn experiment. The relationships were analyzed between hyperspectral vegetation indices and Fv/Fm and the monitoring models were established for Fv/Fm in the whole growth stages of compact corn. The results indicated that Fv/Fm was significantly correlated to the hyperspectral vegetation indices. Among them, structure-sensitive pigment index (SIPI) was the most sensitive remote sensing variable for monitoring Fv/Fm with correlation coefficient (r) of 0. 88. The monitoring model of Fv/Fm was established on the base of SIPI, and the determination coefficients (r2) and the root mean square errors (RMSE) were 0. 812 6 and 0. 082 respectively. The overall results suggest that hyperspectral vegetation indices can be potential indicators to monitor Fv/Fm during growth stages of compact corn.

  11. pH dependence of the fluorescence lifetime of FAD in solution and in cells.

    Science.gov (United States)

    Islam, Md Serajul; Honma, Masato; Nakabayashi, Takakazu; Kinjo, Masataka; Ohta, Nobuhiro

    2013-01-18

    We have studied physiological parameters in a living cell using fluorescence lifetime imaging of endogenous chromophores. In this study, pH dependence of the fluorescence lifetime of flavin adenine dinucleotide (FAD), that is a significant cofactor exhibiting autofluorescence, has been investigated in buffer solution and in cells. The fluorescence lifetime of FAD remained unchanged with pH 5 to 9 in solution. However, the fluorescence lifetime in HeLa cells was found to decrease with increasing intracellular pH, suggesting that pH in a single cell can be estimated from the fluorescence lifetime imaging of FAD without adding exogenous fluorescent probes.

  12. Short-term variability and transport of nutrients and Chlorophyll-a in Bertioga Channel, São Paulo State, Brazil

    Directory of Open Access Journals (Sweden)

    Sônia Maria Flores Gianesella

    2005-12-01

    Full Text Available Short-term variability of nutrients, chlorophyll-a (Chl-a and seston (TSS concentrations were followed up at a fixed station in the Bertioga Channel (BC, Southeastern Brazil, over two full tidal cycles of neap and spring tides, during the winter of 1991. Simultaneous data on hydrographic structure, tidal level and currents allowed the computation of the net transport of those properties. Tidal advection and freshwater flow were the main forcing agents on the water column structure, nutrient availability and Chl-a distribution. Dissolved inorganic nitrogen and phosphate average values were high (16.88 and 0.98 ¼M, respectively, at neap tide and 10.18 and 0.77¼M at spring tide. Despite N and P availability, Chl-a average values were low: 1.13 in the neap and 3.11 mg m-3 in the spring tide, suggesting that the renovation rate of BC waters limits phytoplankton accumulation inside the estuary. The highest Chl-a was associated with the entrance of saltier waters, while the high nutrient concentrations were associated with brackish waters. Nutrients were exported on both tides, TSS and Chl-a were exported on the spring tide and Chl-a was imported on the neap tide. The study of the main transport components indicated that this system is susceptible to the occasional introduction of pollutants from the coastal area, thus presenting a facet of potential fragility.Variações de curta escala das concentrações de nutrientes, clorofila-a (Cl-a e séston foram acompanhadas em uma estação fixa no canal de Bertioga (CB, sudeste do Brasil, em dois ciclos completos de maré de quadratura e sizígia, no inverno de 1991. Dados simultâneos da estrutura hidrográfica, marés e correntes permitiram calcular o transporte resultante daquelas propriedades. A advecção por maré e o fluxo de água doce foram as principais forçantes da estrutura hidrográfica e da distribuição de nutrientes e Cl-a. As concentrações médias de NID e fosfato foram altas

  13. A comparative study of chlorophyll-a concentration during different tropical cyclones in the Bay of Bengal based on measurements and model simulations

    Science.gov (United States)

    Pandey, Suchita; Bhagawati, Chirantan; Patel, Ramkrushnbhai; Chakraborty, Arun; Jayanarayanan, Kuttippurath

    2016-04-01

    Chlorophyll-a (chl-a) pigments derived from ocean color can be used as a tool for estimating phytoplankton distribution in the observed oceanic region. This study aims at providing new insights on the variability of chl-a concentration during the occurrences of different cyclones in the Bay of Bengal (BoB). We consider two tropical cyclones of different intensities observed in the BOB; MALA and NILAM. MALA was a cyclonic storm and was formed on 24 April 2006 and dissipated by 30 April 2006. The wind speed and lowest pressure during the MALA have been recorded as 185‒220 Km/h and 950 hp, respectively. Multi-satellite observations are used for chl-a (SeaWiFS, MODIS, OCM-2), winds (QuickSCAT) and sea surface height (SSH) (TOPEX/POSEIDON) analyses in this study. Argo data taken from CORIOLIS (along the cyclone track) are used for temperature and salinity, from which Mixed Layer Depth (MLD), Isothermal Layer Depth (ILD), Barrier Layer Thickness (BLT) is calculated. A case study for MALA cyclone using daily forcing of winds and surface net heat flux in 'Regional Ocean Modeling System' (ROMS) with NPCHLZD (Nitrate, Phytoplankton, Chlorophyll, Zooplankton and Detritus), five components ecosystem model is used for study the chl-a variability during the cyclone. The results show high chl-a concentration along the track as well as in the right side of the track of the cyclone. The daily variations of MLD, BLT, SSH and wind stress curl (WSC) are compared with the daily time series of chl-a for pre-cyclone, during cyclone and post cyclone period. During and after the passage of cyclone average chl-a values increased from 0.2 mg/l to 0.4 mg/l and greater. It shows good agreement with MLD (30‒40 m), negligible BLT and strong WSC (4*10-6n/m3). It implies the strong winds has initiated upwelling, which subsequently triggered phytoplankton bloom during and after the cyclonic storm. The cyclone NILAM was formed on 28 October 2012 and dissipated by 1 November 2012, which had a

  14. Coupled external cavity photonic crystal enhanced fluorescence.

    Science.gov (United States)

    Pokhriyal, Anusha; Lu, Meng; Ge, Chun; Cunningham, Brian T

    2014-05-01

    We report a fundamentally new approach to enhance fluorescence in which surface adsorbed fluorophore-tagged biomolecules are excited on a photonic crystal surface that functions as a narrow bandwidth and tunable mirror of an external cavity laser. This scheme leads to ∼10× increase in the electromagnetic enhancement factor compared to ordinary photonic crystal enhanced fluorescence. In our experiments, the cavity automatically tunes its lasing wavelength to the resonance wavelength of the photonic crystal, ensuring optimal on-resonance coupling even in the presence of variable device parameters and variations in the density of surface-adsorbed capture molecules. We achieve ∼10(5) × improvement in the limit of detection of a fluorophore-tagged protein compared to its detection on an unpatterned glass substrate. The enhanced fluorescence signal and easy optical alignment make cavity-coupled photonic crystals a viable approach for further reducing detection limits of optically-excited light emitters that are used in biological assays.

  15. [Investigation of quantitative detection of water quality using spectral fluorescence signature].

    Science.gov (United States)

    He, Jun-hua; Cheng, Yong-jin; Han, Yan-ling; Zhang, Hao; Yang, Tao

    2008-08-01

    A method of spectral analysis, which can simultaneously detect dissolved organic matter (DOM) and chlorophyll a (Chl-a) in natural water, was developed in the present paper with the intention of monitoring water quality fast and quantitatively. Firstly, the total luminescence spectra (TLS) of water sample from East Lake in Wuhan city were measured by the use of laser (532 nm) induced fluorescence (LIF). There were obvious peaks of relative intensity at the wavelength value of 580, 651 and 687 nm in the TLS of the sample, which correspond respectively to spectra of DOM, and the Raman scattering of water and Chl-a in the water. Then the spectral fluorescence signature (SFS) technique was adopted to analyze and distinguish spectral characteristics of DOM and Chl-a in natural water. The calibration curves and function expressions, which indicate the relation between the normalized fluorescence intensities of DOM and Chl-a in water and their concentrations, were obtained respectively under the condition of low concentration( 40 mg x L(-1)), the Raman scattering signal is totally absorbed by the molecules of humic acid being on the ground state, so the normalization technique can not be adopted. However the function expression between the concentration of the solution with humic acid and its relative fluorescence peak intensity can be acquired directly with the aid of experiment of fluorescence spectrum. It is concluded that although the expression is non-linearity as a whole, there is a excellent linear relation between the fluorescence intensity and concentration of DOM when the concentration is less than 200 mg x L(-1). The method of measurement based on spectral fluorescence signature technique and the calibration curves gained will have prospects of broad application. It can recognize fast what pollutants are and detect quantitatively their contents in water. It is realizable to monitor the quality of natural water with real time, dynamics and inlarge area.

  16. The Use of Chlorophyll Fluorescence Lifetime to Assess Phytoplankton Physiology within a River-Dominated Environment

    Science.gov (United States)

    Hall, Callie M.; Miller, Richard L.; Redalje, Donald G.; Fernandez, Salvador M.

    2002-01-01

    Chlorophyll a fluorescence lifetime was measured for phytoplankton populations inhabiting the three physical zones surrounding the Mississippi River's terminus in the Gulf of Mexico. Observations of river discharge volume, nitrate + nitrite, silicate, phosphate, PAR (Photosynthetically Active Radiation) diffuse attenuation within the water column, salinity, temperature, SPM, and chl a concentration were used to characterize the distribution of chl fluorescence lifetime within a given region within restricted periods of time. 33 stations extending from the Mississippi River plume to the shelf break of the Louisiana coast were surveyed for analysis of chlorophyll fluorescence lifetime during two cruises conducted March 31 - April 6, 2000, and October 24 - November 1, 2000. At each station, two to three depths were chosen for fluorescence lifetime measurement to represent the vertical characteristics of the water column. Where possible, samples were taken from just below the surface and from just above and below the pycnocline. All samples collected were within the 1% light level of the water column (the euphotic zone). Upon collection, samples were transferred to amber Nalgene bottles and left in the dark for at least 15 minutes to reduce the effects of non-photochemical quenching and to insure that photosynthetic reaction centers were open. Before measurements within the phase fluorometer were begun, the instrument was allowed to warm up for no less than one hour.

  17. Chemical bonding of chlorophylls and plant aminic axial ligands impact harvesting of visible light and quenching of fluorescence.

    Science.gov (United States)

    Ioannidis, Nikolaos E; Tsiavos, Theodoros; Kotzabasis, Kiriakos

    2012-01-01

    In the present work, we tested the mode of interaction of all three polyamines (putrescine, spermidine and spermine) with chlorophyll a and b, as well as pheophytin a and b. The results showed that all three polyamines bind to the Mg ion of chlorophyll ring as probed by Raman spectroscopy. The coordination of spermine with Chl b has the most interesting features from all pigments tested. Spermine induces reversible increases and decreases of the fluorescence yield of Chl b at about 661 nm. Interestingly, equilibrium between a high-fluorescence yield conformation and a low yield is feasible by the interaction of chlorophyll b and aminic ligands. Furthermore, absorption data for the diagnostic regions of 518 and 535 nm are provided for all combinations of pigments and ligands. The significance and consistence of these results with respect to photochemical and bioenergetic principles are discussed.

  18. Fluorescent halite from Bochnia salt mine, Poland

    Science.gov (United States)

    Waluś, Edyta; Głąbińska, Dobrochna; Puławska, Aleksandra; Flasza, Michał; Manecki, Maciej

    2016-04-01

    The photoluminescence of selected halite crystals from Bochnia Salt Mine (Bochnia, Poland) were discovered in 2014. This is a result of contemporary precipitation from percolating waters. In most cases the fluorescence is observed in whole crystals or in zones of crystals. Only clear parts of transparent crystals are orange-red fluorescent in short UV light (320 nm). Chemical microanalysis by scanning electron microscopy/energy dispersive spectroscopy SEM/EDS indicates that this is activated by Mn and Pb. The concentration of Mn is similar in fluorescent and inactive salt and equals to 0.13 - 0.27 wt.%. The concentration of Pb, however, averages to 3.8 wt.% in fluorescent parts reaching only 1.9 wt.% elsewhere. There is no difference in the unit cell parameters determined by powder X-ray diffraction. The percolating waters contain some Mn (ca. 3.9 ppm) but the concentration of Pb is below the detection limits. The experiments of precipitation of halite from the solutions containing various concentrations of Mn and Pb were performed to simulate this fenomenon using solutions containing: 1 mg Pb/L and 80 mg Mn/L; 1 mg Pb/L and 0.8 mg Mn/L; 1 mg Pb/L and 0.6 mg Mn/L; and 0 mg Pb/L and 80 mg Mn/L. The results indicate that fluorescence is apparent when halite forms from solutions containing more than 0.8 mg Mn/L and more than 1 mg Pb/L. The presence of lead as co-activator is necessary requirement: Mn alone does not activate the fluorescence of halite. This is in accordance with the results of previous work (Murata et al., 1946; Sidike et al., 2002). Rock salt in the mine does not show fluorescence at all. Fluorescence of contemporary salt in Bochnia salt mine is a result of mining activity and slight, sporadic contamination with traces of Mn and Pb. This work is partially funded by AGH research grant no 11.11.140.319. Murata K. J., Smith R. L., 1946. Manganese and lead as coactivators of red fluorescence in halite, American Mineralogist, Volume 31, pages 527

  19. Biological applications of confocal fluorescence polarization microscopy

    Science.gov (United States)

    Bigelow, Chad E.

    Fluorescence polarization microscopy is a powerful modality capable of sensing changes in the physical properties and local environment of fluorophores. In this thesis we present new applications for the technique in cancer diagnosis and treatment and explore the limits of the modality in scattering media. We describe modifications to our custom-built confocal fluorescence microscope that enable dual-color imaging, optical fiber-based confocal spectroscopy and fluorescence polarization imaging. Experiments are presented that indicate the performance of the instrument for all three modalities. The limits of confocal fluorescence polarization imaging in scattering media are explored and the microscope parameters necessary for accurate polarization images in this regime are determined. A Monte Carlo routine is developed to model the effect of scattering on images. Included in it are routines to track the polarization state of light using the Mueller-Stokes formalism and a model for fluorescence generation that includes sampling the excitation light polarization ellipse, Brownian motion of excited-state fluorophores in solution, and dipole fluorophore emission. Results from this model are compared to experiments performed on a fluorophore-embedded polymer rod in a turbid medium consisting of polystyrene microspheres in aqueous suspension. We demonstrate the utility of the fluorescence polarization imaging technique for removal of contaminating autofluorescence and for imaging photodynamic therapy drugs in cell monolayers. Images of cells expressing green fluorescent protein are extracted from contaminating fluorescein emission. The distribution of meta-tetrahydroxypheny1chlorin in an EMT6 cell monolayer is also presented. A new technique for imaging enzyme activity is presented that is based on observing changes in the anisotropy of fluorescently-labeled substrates. Proof-of-principle studies are performed in a model system consisting of fluorescently labeled bovine

  20. Nine New Fluorescent Probes

    Science.gov (United States)

    Lin, Tsung-I.; Jovanovic, Misa V.; Dowben, Robert M.

    1989-06-01

    Absorption and fluorescence spectroscopic studies are reported here for nine new fluorescent probes recently synthesized in our laboratories: four pyrene derivatives with substituents of (i) 1,3-diacetoxy-6,8-dichlorosulfonyl, (ii) 1,3-dihydroxy-6,8-disodiumsulfonate, (iii) 1,3-disodiumsulfonate, and (iv) l-ethoxy-3,6,8-trisodiumsulfonate groups, and five [7-julolidino] coumarin derivatives with substituents of (v) 3-carboxylate-4-methyl, (vi) 3- methylcarboxylate, (vii) 3-acetate-4-methyl, (viii) 3-propionate-4-methyl, and (ix) 3-sulfonate-4-methyl groups. Pyrene compounds i and ii and coumarin compounds v and vi exhibit interesting absorbance and fluorescence properties: their absorption maxima are red shifted compared to the parent compound to the blue-green region, and the band width broadens considerably. All four blue-absorbing dyes fluoresce intensely in the green region, and the two pyrene compounds emit at such long wavelengths without formation of excimers. The fluorescence properties of these compounds are quite environment-sensitive: considerable spectral shifts and fluorescence intensity changes have been observed in the pH range from 3 to 10 and in a wide variety of polar and hydrophobic solvents with vastly different dielectric constants. The high extinction and fluorescence quantum yield of these probes make them ideal fluorescent labeling reagents for proteins, antibodies, nucleic acids, and cellular organelles. The pH and hydrophobicity-dependent fluorescence changes can be utilized as optical pH and/or hydrophobicity indicators for mapping environmental difference in various cellular components in a single cell. Since all nine probes absorb in the UV, but emit at different wavelengths in the visible, these two groups of compounds offer an advantage of utilizing a single monochromatic light source (e.g., a nitrogen laser) to achieve multi-wavelength detection for flow cytometry application. As a first step to explore potential application in

  1. FAA Fluorescent Penetrant Laboratory Inspections

    Energy Technology Data Exchange (ETDEWEB)

    WINDES,CONNOR L.; MOORE,DAVID G.

    2000-08-02

    The Federal Aviation Administration Airworthiness Assurance NDI Validation Center currently assesses the capability of various non-destructive inspection (NDI) methods used for analyzing aircraft components. The focus of one such exercise is to evaluate the sensitivity of fluorescent liquid penetrant inspection. A baseline procedure using the water-washable fluorescent penetrant method defines a foundation for comparing the brightness of low cycle fatigue cracks in titanium test panels. The analysis of deviations in the baseline procedure will determine an acceptable range of operation for the steps in the inspection process. The data also gives insight into the depth of each crack and which step(s) of the inspection process most affect penetrant sensitivities. A set of six low cycle fatigue cracks produced in 6.35-mm thick Ti-6Al-4V specimens was used to conduct the experiments to produce sensitivity data. The results will document the consistency of the crack readings and compare previous experiments to find the best parameters for water-washable penetrant.

  2. 低氮胁迫对耐低氮玉米品种苗期光合及叶绿素荧光特性的影响%Effects of low nitrogen stress on photosynthetic characteristics and chlorophyll fluorescence parameters of maize cultivars tolerant to low nitrogen stress at the seedling stage

    Institute of Scientific and Technical Information of China (English)

    李强; 罗延宏; 余东海; 孔凡磊; 杨世民; 袁继超

    2015-01-01

    Objectives] Chlorophyll fluorescence parameters are often used to evaluate the function of photosynthetic organs and the influence of the environment pressure. Tolerance to low nitrogen stress are largely different with different maize genotypes, which can be reflected through photosynthesis and chlorophyll fluorescence characteristics. In this paper, the response of four maize cultivars to low nitrogen stress were compared at the seedling stage for the purpose of further understanding of the mechanism of their low nitrogen tolerance.[Methods]A completely random two-factor pot experiment was conducted in greenhouse. The main factor was maize cultivars, two tolerant cultivars of Zhenghong 311 and Chengdan 30 , two non-tolerant cultivars of Xianyu 508 and Beisan 2;The second factor was N levels: N 15 mmol/L ( CK, Hoagland nutrition solution ) , 0. 5 mmol/L ( low N stress, LN1), N:0. 05 mmol/L(extremely low N stress, LN2). The items were measured, including individual plant dry matter and nitrogen accumulation, relative chlorophyll content ( SPAD ) of leaves, and the photosynthesis parameters. [Results]The dry matter and nitrogen accumulation amounts of per plant, relative chlorophyll content (SPAD)of leaves, net photosynthetic rate(Pn), stomatal conductance(Gs), transpiration rate(Tr), variable fluorescence( Fv ) , maximum fluorescence ( Fm ) , potential activity of PSⅡ( Fv/F0 ) , the primary maximum photochemical efficiency of PSⅡ( Fv/Fm) , effective light quantum yield of PSⅡ( Fv′/Fm′) and photochemical quenching coefficient( qP ) of the four maize hybrids are declined sharply under the low nitrogen stress conditions. Compared with the low nitrogen sensitive maize cultivars, the reduced ranges of these parameters of the low nitrogen tolerant maize cultivars are much lower. In contrast to the above parameters, the intercellular CO2 concentrations are remarkably increased in the tested maize hybrids, and the concentration increases of the low nitrogen

  3. Evaluation the vigour of urban green lawn grown under long-term shade conditions by the use of chlorophyll fluorescence technique

    Directory of Open Access Journals (Sweden)

    Dąbrowski Piotr

    2015-09-01

    Full Text Available Unfavorable light conditions in urban areas are one of the most important cause of inappropriate grass communities condition. The possibility to detect the plant stress caused by shade is an important element in shaping the environment. The answer to following questions: what is the ability to detect the stress caused by shade in chosen lawn varieties of Perennial ryegrass by using the chlorophyll a fluorescence (O-J-I-P test and which of tested varieties has the best properties to create grasslands in reduced light conditions is the aim of this work. Two-factor experimental micro-plot was conducted with three varieties and three different shadowing variants. Chlorophyll a fluorescence measurements were provided and were compared to leaf density. Our results explored significant difference between selected varieties in the terms of their photosynthetic apparatus adaption to light conditions. During May, all tested varieties were characterized by the rise of all fluorescence curve points under lower light intensity. The largest changes under shade conditions were noticed for the variety ‘Taya’. During next months a declining trend of photosynthetic efficiency for this variety was observed. On the basis of our results, we assume that each variety has unique threshold and needs of light intensity.

  4. Uso de sensoriamento remoto orbital para avaliação da distribuição espacial de Clorofila_a na Lagoa da Conceição - Florianópolis, SC Use of orbital remote sensing in the assessment of spatial distribution of Chlorophyll_a in Lagoa da Conceição - Florianópolis, SC

    Directory of Open Access Journals (Sweden)

    Luiz C. P. Martini

    2006-12-01

    Full Text Available O trabalho buscou identificar a possibilidade do uso de sensoriamento remoto orbital no monitoramento da qualidade da água na Lagoa da Conceição, Florianópolis (SC, em especial do parâmetro Clorofila_a e suas implicações à cor da água, propriedade que pode ser avaliada a partir de imagens de satélite. No estudo, procurou-se obter uma correlação entre os níveis de Clorofila_a medidos em amostras de água da lagoa e o padrão de resposta espectral detectado por sensores embarcados no satélite comercial Landsat TM5. Os resultados do estudo revelaram que sistemas orbitais como o Landsat TM5 podem ser utilizados na investigação de parâmetros de qualidade da água que alteram a cor superficial de corpos hídricos e a partir de imagens de satélite é possível obter distribuição espacial da concentração substâncias tais como a Clorofila_a.This work searches to identify the possibility to use orbital remote sensing in the monitoring of water quality in Lagoa da Conceição, Florianópolis, SC, specifically regarding levels of Chlorophyll_a and its implications in water color, a property which can be evaluated through satelite imagery. The aim of his study was to obtain a correlation between the levels of Chlorophylla_a found in water samples from Lagoa da Conceição and the spectral response pattern detected by sensors built into the commercial satellite TM5. The results show that orbital systems like Landsat TM5 can be utilized in the investigation of water quality parameters that effect surface color in bodies of water. Through satellite imagery it is possible to obtain the spatial distribution of concentrated substances such as Chlorophyll_a.

  5. Stroboscopic fluorescence lifetime imaging.

    Science.gov (United States)

    Holton, Mark D; Silvestre, Oscar R; Errington, Rachel J; Smith, Paul J; Matthews, Daniel R; Rees, Paul; Summers, Huw D

    2009-03-30

    We report a fluorescence lifetime imaging technique that uses the time integrated response to a periodic optical excitation, eliminating the need for time resolution in detection. A Dirac pulse train of variable period is used to probe the frequency response of the total fluorescence per pulse leading to a frequency roll-off that is dependent on the relaxation rate of the fluorophores. The technique is validated by demonstrating wide-field, realtime, lifetime imaging of the endocytosis of inorganic quantum dots by a cancer cell line. Surface charging of the dots in the intra-cellular environment produces a switch in the fluorescence lifetime from approximately 40 ns to technique offers lifetime based imaging at video rates with standard CCD cameras and has application in probing millisecond cell dynamics and in high throughput imaging assays.

  6. Photoacoustic-fluorescence in vitro flow cytometry for quantification of absorption, scattering and fluorescence properties of the cells

    Science.gov (United States)

    Nedosekin, D. A.; Sarimollaoglu, M.; Foster, S.; Galanzha, E. I.; Zharov, V. P.

    2013-03-01

    Fluorescence flow cytometry is a well-established analytical tool that provides quantification of multiple biological parameters of cells at molecular levels, including their functional states, morphology, composition, proliferation, and protein expression. However, only the fluorescence and scattering parameters of the cells or labels are available for detection. Cell pigmentation, presence of non-fluorescent dyes or nanoparticles cannot be reliably quantified. Herewith, we present a novel photoacoustic (PA) flow cytometry design for simple integration of absorbance measurements into schematics of conventional in vitro flow cytometers. The integrated system allow simultaneous measurements of light absorbance, scattering and of multicolor fluorescence from single cells in the flow at rates up to 2 m/s. We compared various combinations of excitation laser sources for multicolor detection, including simultaneous excitation of PA and fluorescence using a single 500 kHz pulsed nanosecond laser. Multichannel detection scheme allows simultaneous detection of up to 8 labels, including 4 fluorescent tags and 4 PA colors. In vitro PA-fluorescence flow cytometer was used for studies of nanoparticles uptake and for the analysis of cell line pigmentation, including genetically encoded melanin expression in breast cancer cell line. We demonstrate that this system can be used for direct nanotoxicity studies with simultaneous quantification of nanoparticles content and assessment of cell viability using a conventional fluorescent apoptosis assays.

  7. Fluorescent fingerprints of edible oils and biodiesel by means total synchronous fluorescence and Tucker3 modeling

    Science.gov (United States)

    Insausti, Matías; de Araújo Gomes, Adriano; Camiña, José Manuel; de Araújo, Mario Cesar Ugulino; Band, Beatriz Susana Fernández

    2017-03-01

    The present work proposes the use of total synchronous fluorescence spectroscopy (TSFS) as a discrimination methodology for fluorescent compounds in edible oils, which are preserved after the transesterification processes in the biodiesel production. In the same way, a similar study is presented to identify fluorophores that do not change in expired vegetal oils, to associate physicochemical parameters to fluorescent measures, as contribution to a fingerprint for increasing the chemical knowledge of these products. The fluorescent fingerprints were obtained by Tucker3 decomposition of a three-way array of the total synchronous fluorescence matrices. This chemometric method presents the ability for modeling non-bilinear data, as Total Synchronous Fluorescence Spectra data, and consists in the decomposition of the three way data arrays (samples × Δλ × λ excitation), into four new data matrices: A (scores), B (profile in Δλ mode), C (profile in spectra mode) and G (relationships between A, B and C). In this study, 50 samples of oil from soybean, corn and sunflower seeds before and after its expiration time, as well as 50 biodiesel samples obtained by transesterification of the same oils were measured by TSFS. This study represents an immediate application of chemical fingerprint for the discrimination of non-expired and expired edible oils and biodiesel. This method does not require the use of reagents or laborious procedures for the chemical characterization of samples.

  8. Polyester Fabric's Fluorescent Dyeing in Supercritical Carbon Dioxide and its Fluorescence Imaging.

    Science.gov (United States)

    Xiong, Xiaoqing; Xu, Yanyan; Zheng, Laijiu; Yan, Jun; Zhao, Hongjuan; Zhang, Juan; Sun, Yanfeng

    2017-03-01

    As one of the most important coumarin-like dyes, disperse fluorescent Yellow 82 exhibits exceptionally large two-photon effects. Here, it was firstly introduced into the supercritical CO2 dyeing polyester fabrics in this work. Results of the present work showed that the dyeing parameters such as the dyeing time, pressure and temperature had remarkable influences on the color strength of fabrics. The optimized dyeing condition in supercritical CO2 dyeing has been proposed that the dyeing time was 60 min; the pressure was 25 MPa and the temperature was 120 °C. As a result, acceptable products were obtained with the wash and rub fastness rating at 5 or 4-5. The polyester fabrics dyed with fluorescent dyes can be satisfied for the requirement of manufacturing warning clothing. Importantly, the confocal microscopy imaging technology was successfully introduced into textile fields to observe the distribution and fluorescence intensity of disperse fluorescent Yellow 82 on polyester fabrics. As far as we know, this is the first report about supercritical CO2 dyeing polyester fabrics based on disperse fluorescent dyes. It will be very helpful for the further design of new fluorescent functional dyes suitable for supercritical CO2 dyeing technique.

  9. Optimized Time-Gated Fluorescence Spectroscopy for the Classification and Recycling of Fluorescently Labeled Plastics.

    Science.gov (United States)

    Fomin, Petr; Zhelondz, Dmitry; Kargel, Christian

    2016-08-29

    For the production of high-quality parts from recycled plastics, a very high purity of the plastic waste to be recycled is mandatory. The incorporation of fluorescent tracers ("markers") into plastics during the manufacturing process helps overcome typical problems of non-tracer based optical classification methods. Despite the unique emission spectra of fluorescent markers, the classification becomes difficult when the host plastics exhibit (strong) autofluorescence that spectrally overlaps the marker fluorescence. Increasing the marker concentration is not an option from an economic perspective and might also adversely affect the properties of the plastics. A measurement approach that suppresses the autofluorescence in the acquired signal is time-gated fluorescence spectroscopy (TGFS). Unfortunately, TGFS is associated with a lower signal-to-noise (S/N) ratio, which results in larger classification errors. In order to optimize the S/N ratio we investigate and validate the best TGFS parameters-derived from a model for the fluorescence signal-for plastics labeled with four specifically designed fluorescent markers. In this study we also demonstrate the implementation of TGFS on a measurement and classification prototype system and determine its performance. Mean values for a sensitivity of [Formula: see text] = 99.93% and precision [Formula: see text] = 99.80% were achieved, proving that a highly reliable classification of plastics can be achieved in practice.

  10. γ-氨基丁酸(GABA)对低氧胁迫下甜瓜幼苗光合作用和叶绿素荧光参数的影响%Effects of γ-aminobutyric acid on the photosynthesis and chlorophyll fluorescence parameters of muskmelon seedlings under hypoxia stress

    Institute of Scientific and Technical Information of China (English)

    夏庆平; 高洪波; 李敬蕊

    2011-01-01

    By the method of hydroponic culture, this paper studied the effects of exogenous γ-aminobutyric acid ( GABA) on the photosynthetic pigment contents, photosynthesis. and chlorophyll fluorescence parameters of muskmelon seedlings under hypoxia stress. Hypoxia stress induced a significant decrease of photosynthetic pigment contents, resulting in the decrease of photosynthesis.Applying GABA could significantly increase the photosynthetic pigment contents, net photosynthetic rate (Pn) , stomatal conductance ( Gs ) , intercellular CO2 concentration ( Ci) , carboxylation efficiency ( CE ) . maximal photochemical efficiency of Ps Ⅱ ( Fv/Fm ) , photochemical quenching (qP) , apparent photosynthetic electron transfer rate ( ETR) , and quantum yield of PS Ⅱ electron transport ( ΦPSⅡ ) , and decrease the stomatal limitation value (Ls ) , minimal fluorescence ( F0) ,and non-photochemical quenching ( NPQ) under both hypoxic and normal conditions. The alleviation effect of GABA on photosynthetic characteristics was more obvious under hypoxia stress. However. simultaneously applying GABA and VGB could significantly decrease the alleviation effect of GABA under hypoxia stress.%采用营养液水培方法,研究了低氧胁迫下外源γ-氨基丁酸(GABA)对甜瓜幼苗光合色素含量、光合作用及叶绿素荧光参数的影响.结果表明:低氧胁迫导致甜瓜幼苗光合色素含量显著下降,光合作用降低;外源GABA能显著提高正常通气和低氧胁迫下甜瓜幼苗的光合色素含量、净光合速率、气孔导度、胞间CO2浓度、CO2羧化效率、最大光化学效率、光化学猝灭系数、表观光合电子传递速率和PSⅡ光合电子传递量子效率,而气孔限制值、初始荧光和非光化学猝灭系数显著降低,GABA在低氧胁迫下的提高效果更明显;同时添加GABA和GABA转氨酶抑制剂γ-乙烯基-γ-氨基丁酸(VGB)处理显著降低了低氧胁迫下GABA对甜瓜幼苗光合特性的缓解效果.

  11. 利用叶绿素含量及荧光动力学参数评价青贮玉米耐旱关键指标研究%Evaluation of drought tolerance in silage maize based on chlorophyll content and fluorescence kinetics parameters

    Institute of Scientific and Technical Information of China (English)

    何文铸; 张彪; 王培; 杨俊品; 冷益丰; 康继伟; 唐海涛; 陈洁; 谭君

    2013-01-01

    In attempt to provide a reliable theoretical basis for breeding of drought tolerance in silage maize in the arid hilly areas,the drought tolerance in silage maize were determined.The chlorophyll content and chlorophyll fluorescence kinetics parameters of 26 silage maize inbred lines and 105 crosses were measured using chlorophyll fluorometer.The principal component and correlation analysis were conducted against their key indices of drought tolerance,combining ability and genetic parameters.The order of influencing factors of Fv/Fm was:leaf Fv > leaf Fm > leaf Fo > leaf Area > leaf SPAD > bracteal leaf Fv/Fm > bracteal leaf SPAD.9 inbred lines which had higher general combining ability (GCA) and 19 crosses which had higher specific combining ability (SCA) were screened from the present study for 5 traits including leaf Fm,leaf Fv,leaf Area,leaf Fv/Fm and leaf SPAD.At silking stage in F1,the additive variation was principal in leaf Fo and leaf Area; leaf Fm and leaf Fv were commonly controlled by additive and no-additive effects; non-additive variation was principal in leaf Fv/Fm and leaf SPAD.The order of narrow heritability (h2N) was:leaf SPAD > leaf Area > leaf Fo > leaf Fv > leaf Fm> leaf Fv/Fm.It could increase biological yield of silage maize in the arid areas through early generation positive direct selection for leaf Fv,early generation negative direct selection for leaf Fo,and utilization of heterosis for leaf Fv/Fm.Chlorophyll content and chlorophyll fluorescence kinetics parameters could be employed for screening of drought tolerance in silage maize.%利用叶绿素荧光仪测定了26份青贮玉米自交系和105个组合的叶绿素含量及荧光动力学参数,对其生理性状关键耐旱指标进行主成分及相关分析,并进行配合力及遗传参数分析.青贮玉米Fv/Fm的影响因素大小依次为:叶片Fv>叶片Fm>叶片Fo>叶片Area>叶片SPAD>苞叶Fv/Fm>苞叶SPAD.筛选出了5个关键指标(叶

  12. FLEX: fluorescence explorer

    NARCIS (Netherlands)

    Stoll, M.Ph.; Court, A.J.; Smorenburg, C.; Visser, H.; Crocco, L.; Heilimo, J.; Honig, A.

    1999-01-01

    FLEX is a scientifically driven space mission to provide demonstration/validation of the instrumentation and technique for measuring the natural fluorescence of vegetation in the Fraunhofer lines. The payload consists of high spectral resolution (0.1-0.3 nm) CCD imaging grating spectrometer with two

  13. Fluorescence Experiments with Quinine

    Science.gov (United States)

    O'Reilly, James E.

    1975-01-01

    Describes a series of experiments which illustrate the analytical capabilities of fluorescence, and outlines two straightforward analyses involving real analyses. These experiments are suitable for an undergraduate instrumental analysis course and require approximately six to seven hours of laboratory time. (MLH)

  14. SIMULTANEOUS MEASUREMENT OF CIRCULAR DICHROISM AND FLUORESCENCE POLARIZATION ANISOTROPY.

    Energy Technology Data Exchange (ETDEWEB)

    SUTHERLAND,J.C.

    2002-01-19

    Circular dichroism and fluorescence polarization anisotropy are important tools for characterizing biomolecular systems. Both are used extensively in kinetic experiments involving stopped- or continuous flow systems as well as titrations and steady-state spectroscopy. This paper presents the theory for determining circular dichroism and fluorescence polarization anisotropy simultaneously, thus insuring the two parameters are recorded under exactly the same conditions and at exactly the same time in kinetic experiments. The approach to measuring circular dichroism is that used in almost all conventional dichrographs. Two arrangements for measuring fluorescence polarization anisotropy are described. One uses a single fluorescence detector and signal processing with a lock-in amplifier that is similar to the measurement of circular dichroism. The second approach uses classic ''T'' format detection optics, and thus can be used with conventional photon-counting detection electronics. Simple extensions permit the simultaneous measurement of the absorption and excitation intensity corrected fluorescence intensity.

  15. Thermodynamic analysis of fluorescence enhancement and Quenching theory equations

    Institute of Scientific and Technical Information of China (English)

    Manman YANG; Xiaoli XI; Pin YANG

    2008-01-01

    The action of the three kinds of new third generation cephalosporin,class drugs,cefepime hydrochroride,cefpiramide and ceftizoxime with HSA and BSA was studied at different temperatures through the fluorescence method. First,the binding constants were calculated by using fluorescence quenching and enhancement theoretical equations. Their thermodynamic functions were also calculated. Because the KA corresponding to the different theoretical equations are not completely the same,the thermodynamic parameters calculated are also different. In this paper,the differences among these thermodynamic data obtained from the different theoretical equations were analyzed and the results show that the thermodynamic data deduced from fluorescence enhancement are more reasonable. Thus,we propose that even when the fluorescence quenching action of the acceptorsubstrate is studied,more realistic data can be obtained by using the fluorescence enhancement equation.

  16. Supergranular Parameters

    Science.gov (United States)

    Udayashankar, Paniveni

    2016-07-01

    I study the complexity of supergranular cells using intensity patterns from Kodaikanal solar observatory. The chaotic and turbulent aspect of the solar supergranulation can be studied by examining the interrelationships amongst the parameters characterizing supergranular cells namely size, horizontal flow field, lifetime and physical dimensions of the cells and the fractal dimension deduced from the size data. The findings are supportive of Kolmogorov's theory of turbulence. The Data consists of visually identified supergranular cells, from which a fractal dimension 'D' for supergranulation is obtained according to the relation P α AD/2 where 'A' is the area and 'P' is the perimeter of the supergranular cells. I find a fractal dimension close to about 1.3 which is consistent with that for isobars and suggests a possible turbulent origin. The cell circularity shows a dependence on the perimeter with a peak around (1.1-1.2) x 105 m. The findings are supportive of Kolmogorov's theory of turbulence.

  17. Effects of five kinds of antibiotics stressed on chlorophyll fluorescence parameters of Isochrysis sp.CCMMS001%五种抗生素对等鞭金藻(Isochrysis sp. CCMMS001)叶绿素荧光特性的影响

    Institute of Scientific and Technical Information of China (English)

    郑明刚; 郑立; 王玲; 韩笑天; 李海东; 崔志松

    2011-01-01

    利用PHYTO-PAM测定了抗生素胁迫下等鞭金藻(Isochrysis sp.CMMS001)叶绿素荧光参数Fv/ Fm(PSⅡ的最大光能转化效率)的变化规律.结果表明:不同抗生素对等鞭金藻Fv/ Fm的影响存在很大差异,氯霉素、G-418能显著抑制其最大光能转化效率;潮霉素抑制作用次之;卡那霉素、氨苄青霉素没有抑制作用.在f/2培养基中,浓度为600 mg/L氯霉素胁迫下,第3d测得Fv/ Fm值下降97%.在f/2培养基中,浓度为1 200 mg/L潮霉素和500 mg/L G-418胁迫下,第6d测得Fv/Fm值分别下降52%、98%.在淡化5倍f/2培养基中,浓度为1200 mg/L潮霉素和500 mg/L G-418胁迫下,第6d测得的Fv Fm值分别下降77%、100%.卡那霉素、氨苄青霉素胁迫下,Fv/ Fm随着两种抗生素浓度的增加没有降低,反而上升.%The different concentrations of antibiotics stressing on chlorophyll fluorescence parameters Fv/Fm ( PS II maximum solar energy conversion efficiency) of Isochrysis sp. Were determined by Phyto-PAM. The results showed that there was large difference in the impact of different antibiotics on chlorophyll fluorescence parameters Fv/Fm of Isochrysis sp.. Chloramphenicol,C-418 could significantly inhibit the maximum solar energy conversion efficiency of Isochrysis sp. The effect followed by the hygromycin. The effect was not observed by kanamycin and ampicilin for the maximum solar energy conversion efficency of Isochrysis sp. In the f/2 medium, stressed by chloramphenicol with concentration of 600 mg/L,Fv/Fm of Isochrysis sp. Decreased by 97% on the third day. In f/2 medium,stressed by hygromycin with the concentrations of 1 200 mg/L and 500 mg/L G-418 ,Fv/Fm of Isochrysis sp. Decreased by 52% and 98% on the 6th day. In f/2 medium diluted S times,stressed by hygromycin with the concentration of 1 200 mg/L and G-418 with the concentration of 500 mg/L,Fv/Fm of Isochrysis sp. Decreased by 77% and 100% on 6th day. With increasing concentrations of Kanamycin and ampicillin

  18. Fluorescence enhancement with the optical (bi-) conical antenna

    CERN Document Server

    Mohammadi, Ahmad; Sandoghdar, Vahid; Agio, Mario

    2010-01-01

    We investigate the properties of finite gold nanocones as optical antennas for enhancing molecular fluorescence. We compute the modification of the excitation rate, spontaneous emission rate, and quantum efficiency as a function of the nanocone base and length, showing that the maximum field and fluorescence enhancements do not occur for the same nanocone parameters. We compare the results with those for nanorods and nanospheroids and find that nanocones perform better.

  19. Detachment of the fucoxanthin chlorophyll a/c binding protein (FCP) antenna is not involved in the acclimative regulation of photoprotection in the pennate diatom Phaeodactylum tricornutum.

    Science.gov (United States)

    Giovagnetti, Vasco; Ruban, Alexander V

    2017-03-01

    When grown under intermittent light (IL), the pennate diatom Phaeodactylum tricornutum forms 'super' non-photochemical fluorescence quenching (NPQ) in response to excess light. The current model of diatom NPQ mechanism involves two quenching sites, one of which detaches from photosystem II reaction centres (RCIIs) and aggregates into oligomeric complexes. Here we addressed how antenna reorganisation controls NPQ kinetics in P. tricornutum cells grown under continuous light (CL) and IL. Overall, IL acclimation induced: (i) reorganisation of chloroplasts, containing greater pigment pools without a strongly enhanced operation of the xanthophyll cycle, and (ii) 'super NPQ' causing a remarkable reduction of the chlorophyll excited state lifetime at Fm'. Regardless of different levels of NPQ formed in both culture conditions, its dark recovery was rapid and similar fractions of their antenna uncoupled (~50%). Although antenna detachment relieved excitation pressure, it provided a minor protective contribution equivalent to NPQ~1, while the largest NPQ was 4.4±0.2 (CL) and 13±0.8 (IL). The PSII cross-section decrease took place only at relatively low NPQ values, beyond which the cross-section remained constant whilst NPQ continued to rise. This finding suggests that the energy trapping efficiency of diatom antenna quenchers cannot over-compete that of RCIIs, similarly to what has been observed on higher plants. We conclude that such 'economic photoprotection' operates to flexibly adjust the overall efficiency of diatom light harvesting.

  20. Synthesis and Fluorescence Spectra of Triazolylcoumarin Fluorescent Dyes

    Institute of Scientific and Technical Information of China (English)

    PENG Xian-fu; LI Hong-qi

    2009-01-01

    Much attention is devoted to fluorescent dyes especially those with potential in versatile applications. Reactions under "click" conditions between nonfluorescent 3 - azidocoumarins and terminal alkynes produced 3 -(1, 2, 3- triazol- 1 - yl)cournarins, a novel type of fluorescent dyes with intense fluorescence. The structures of the new coumarins were characterized by 1H NMR, MS, and IR spectra. Fluorescence spectra measurement demonstrated excellent fluorescence performance of the triazolylcoumarins and this click reaction is a promising candidate for bioconjugation and bioimaging applications since both azide and alkynes are quite inert to biological systems.

  1. Fluorescence nanoscopy. Methods and applications

    OpenAIRE

    Requejo-Isidro, Jose

    2013-01-01

    Fluorescence nanoscopy refers to the experimental techniques and analytical methods used for fluorescence imaging at a resolution higher than conventional, diffraction-limited, microscopy. This review explains the concepts behind fluorescence nanoscopy and focuses on the latest and promising developments in acquisition techniques, labelling strategies to obtain highly detailed super-resolved images and in the quantitative methods to extract meaningful information from them.

  2. Monte Carlo simulation of zinc protoporphyrin fluorescence in the retina

    Science.gov (United States)

    Chen, Xiaoyan; Lane, Stephen

    2010-02-01

    We have used Monte Carlo simulation of autofluorescence in the retina to determine that noninvasive detection of nutritional iron deficiency is possible. Nutritional iron deficiency (which leads to iron deficiency anemia) affects more than 2 billion people worldwide, and there is an urgent need for a simple, noninvasive diagnostic test. Zinc protoporphyrin (ZPP) is a fluorescent compound that accumulates in red blood cells and is used as a biomarker for nutritional iron deficiency. We developed a computational model of the eye, using parameters that were identified either by literature search, or by direct experimental measurement to test the possibility of detecting ZPP non-invasively in retina. By incorporating fluorescence into Steven Jacques' original code for multi-layered tissue, we performed Monte Carlo simulation of fluorescence in the retina and determined that if the beam is not focused on a blood vessel in a neural retina layer or if part of light is hitting the vessel, ZPP fluorescence will be 10-200 times higher than background lipofuscin fluorescence coming from the retinal pigment epithelium (RPE) layer directly below. In addition we found that if the light can be focused entirely onto a blood vessel in the neural retina layer, the fluorescence signal comes only from ZPP. The fluorescence from layers below in this second situation does not contribute to the signal. Therefore, the possibility that a device could potentially be built and detect ZPP fluorescence in retina looks very promising.

  3. Fluorescence emission of pyrene in surfactant solutions.

    Science.gov (United States)

    Piñeiro, Lucas; Novo, Mercedes; Al-Soufi, Wajih

    2015-01-01

    The systematic description of the complex photophysical behaviour of pyrene in surfactant solutions in combination with a quantitative model for the surfactant concentrations reproduces with high accuracy the steady-state and the time resolved fluorescence intensity of pyrene in surfactant solutions near the cmc, both in the monomer and in the excimer emission bands. We present concise model equations that can be used for the analysis of the pyrene fluorescence intensity in order to estimate fundamental parameters of the pyrene-surfactant system, such as the binding equilibrium constant K of pyrene to a given surfactant micelle, the rate constant of excimer formation in micelles, and the equilibrium constant of pyrene-surfactant quenching. The values of the binding equilibrium constant K(TX100)=3300·10³ M⁻¹ and K(SDS)=190·10³ M⁻¹ for Triton X-100 (TX100) and SDS micelles, respectively, show that the partition of pyrene between bulk water and micelles cannot be ignored, even at relatively high surfactant concentrations above the cmc. We apply the model to the determination of the cmc from the pyrene fluorescence intensity, especially from the intensity ratio at two vibronic bands in the monomer emission or from the ratio of excimer to monomer emission intensity. We relate the finite width of the transition region below and above the cmc with the observed changes in the pyrene fluorescence in this region.

  4. Temporal and spatial variations of chlorophyll a concentration and primary production in Jiulongjiang Estuary waters%九龙江河口水体叶绿素a含量和初级生产力的时空变化

    Institute of Scientific and Technical Information of China (English)

    李荣欣; 王雨; 康建华; 陈兴群

    2011-01-01

    A comprehensive survey of hydrological, chemical and biological resources was conducted in Jiulongjiang Estuary waters in spring, summer and autumn of 2009, for the ecological management of the estuarine safety. This paper studied the seasonal and spatial variation of chlorophyll a concentration and primary production, with their relation to environmental factors. The results showed that the chlorophyll a concentration varied from 0.77 to 15. 89 mg/m3 with a mean of 3.11 mg/m3. The primary production varied from 19.05 to 332.91 mg/(m2 ? D) with a mean of 103. 51 mg/(m2 ? D). Chlorophyll a concentration was the highest in summer and the lowest in autumn. Primary production was the highest in spring and the lowest in autumn.' Compared with literature data chlorophyll a concentration in surface water increased 1.3 to 1.6 times higher than that in 1990. While the primary production in surface water dropped 32% less than that in 1990. Pearson correlate analysis of chlorophyll a concentration with theprimary production and environmental factors indicated that the chlorophyll a concentration correlated positively to the primary production, SiO3-Si concentration and temperature, while correlated insignificantly to phytoplankton density. When the concentrations of DIN and SiO3-Si were high, the water temperature and PO4-P concentration became important in controlling the chlorophyll a concentration and primary production in Jiulongjiang Estuary waters.%根据2009年春(5月)、夏(8月)、秋(11月)在九龙江河口水域进行的生态安全示范区综合外业调查资料,研究了九龙江河口水体叶绿素a含量和初级生产力的时空变化.结果表明,九龙江河口水体叶绿素a含量变化范围为0.77~ 15.89 mg/m3,平均含量为3.11 mg/m3;初级生产力变化范围为19.05~332.91 mg/( m2·d),平均值为103.51 mg/(m2·d).叶绿素a含量均值以夏季的为最高(4.01 mg/m3),其季节变化呈夏季>春季>秋季;初级生产

  5. Variabilidad mensual de la velocidad de surgencia y clorofila a en la región del Panama Bight (Monthly rate variation upwelling and chlorophyll a in the region of Panama Bight

    Directory of Open Access Journals (Sweden)

    Nancy Villegas

    2016-09-01

    Full Text Available Las zonas de surgencia y la presencia de clorofila a en la región del Panamá Bight (golfo de Panamá fueron comparadas en una escala mensual. Las variables utilizadas fueron la velocidad vertical de surgencia estimada mediante el software EVA. V.2.0 y la concentración de clorofila a obtenida de imágenes satelitales SeaWifs. El estudio fue realizado para el área costera entre 6° 30’ y 2° N y en los tres principales focos de ascenso de agua, el primero ubicado entre 83-84° W y 1° 30’-2° 30’ N, el segundo entre 81-82° W y 1° 30’-2° 30’ N, y el tercero entre 82-83° W y 2° 30’-3° 30’ N. Los resultados muestran la asociación directa entre la concentración de clorofila a y la surgencia durante todo el año. El estudio también resalta que el desplazamiento de la zona de convergencia intertropical ZCIT determina la variabilidad estacional del proceso de ascenso, atenuándolo cuando pasa sobre el área de estudio y reforzándolo mientras se aleja. El análisis de correlación entre las variables bajo estudio dio como resultado coeficientes estadísticamente significativos entre 0.5 y 0.9 en los tres focos principales y valores no significativos en la zona costera. (Abstract. The influence of the migration of the ITCZ on the climatic variability of the upwelling vertical velocity (Vz and the spatial-temporal behavior of upwelling spots over the CPO was determined. This influence was corroborated by the presence of chlorophyll a in the upwelling zones. Vz values were calculated with EVA . V.2.0 software. The chlorophyll a content was extracted from satellite images for 1997-2000. A comparison between the upwelling zones distribution, the migration of ITCZ and chlorophyll a was made. This comparison was based on the correlation between variables of three upwelling focuses and a coastal upwelling. The first focus was located between 83-84° W and 1° 30’-2° 30’ N, the second one between 81-82° W and 1° 30’- 2° 30

  6. Hydrolysis of a mixture of saccharides by cellulase from Aspergillus niger and its application for visible-light-induced hydrogen gas production system using Mg chlorophyll-a and platinum nanoparticles

    Energy Technology Data Exchange (ETDEWEB)

    Amao, Yutaka; Hirakawa, Takamasa [Department of Applied Chemistry, Oita University, Dannoharu 700, Oita 870-1192 (Japan)

    2010-07-15

    Cellulase obtained from Aspergillus niger was used to hydrolyze a mixture of saccharides containing sucrose, maltose, and cellobiose; the reduced form of nicotinamide-adenine dinucleotide (NAD{sup +}), which is NADH, was produced during hydrolysis of the mixture of saccharides in the presence of NAD{sup +} and glucose dehydrogenase (GDH). We have developed a visible-light-induced enzymatic biohydrogen production system involving the combination of cellulase-mediated hydrolysis of the mixture of saccharides and hydrogen production by platinum nanoparticles using photosensitization of Mg chlorophyll-a (Mg Chl-a). Continuous production of hydrogen gas was observed when the reaction mixture containing saccharides, cellulase, GDH, NAD{sup +}, Mg Chl-a, methylviologen (MV{sup 2+}, an electron donor), and platinum nanoparticles was irradiated by visible light. After 120 min of irradiation, the amount of hydrogen produced from the mixture of saccharides was approximately 2.8 {mu}mol. (author)

  7. Introduction to fluorescence probing of biological membranes.

    Science.gov (United States)

    Demchenko, Alexander P; Duportail, Guy; Oncul, Sule; Klymchenko, Andrey S; Mély, Yves

    2015-01-01

    Fluorescence is one of the most powerful and commonly used tools in biophysical studies of biomembrane structure and dynamics that can be applied on different levels, from lipid monolayers and bilayers to living cells, tissues, and whole animals. Successful application of this method relies on proper design of fluorescence probes with optimized photophysical properties. These probes are efficient for studying the microscopic analogs of viscosity, polarity, and hydration, as well as the molecular order, environment relaxation, and electrostatic potentials at the sites of their location. Being smaller than the membrane width they can sense the gradients of these parameters across the membrane. We present examples of novel dyes that achieve increased spatial resolution and information content of the probe responses. In this respect, multiparametric environment-sensitive probes feature considerable promise.

  8. Estimating phytoplankton photosynthesis by active fluorescence

    Energy Technology Data Exchange (ETDEWEB)

    Falkowski, P.G.; Kolber, Z.

    1992-01-01

    Photosynthesis can be described by target theory, At low photon flux densities, photosynthesis is a linear function of irradiance (I), The number of reaction centers (n), their effective absorption capture cross section {sigma}, and a quantum yield {phi}. As photosynthesis becomes increasingly light saturated, an increased fraction of reaction centers close. At light saturation the maximum photosynthetic rate is given as the product of the number of reaction centers (n) and their maximum electron transport rate (I/{tau}). Using active fluorometry it is possible to measure non-destructively and in real time the fraction of open or closed reaction centers under ambient irradiance conditions in situ, as well as {sigma} and {phi} {tau} can be readily, calculated from knowledge of the light saturation parameter, I{sub k} (which can be deduced by in situ by active fluorescence measurements) and {sigma}. We built a pump and probe fluorometer, which is interfaced with a CTD. The instrument measures the fluorescence yield of a weak probe flash preceding (f{sub 0}) and succeeding (f{sub 0}) a saturating pump flash. Profiles of the these fluorescence yields are used to derive the instantaneous rate of gross photosynthesis in natural phytoplankton communities without any incubation. Correlations with short-term simulated in situ radiocarbon measurements are extremely high. The average slope between photosynthesis derived from fluorescence and that measured by radiocarbon is 1.15 and corresponds to the average photosynthetic quotient. The intercept is about 15% of the maximum radiocarbon uptake and corresponds to the average net community respiration. Profiles of photosynthesis and sections showing the variability in its composite parameters reveal a significant effect of nutrient availability on biomass specific rates of photosynthesis in the ocean.

  9. Estimating phytoplankton photosynthesis by active fluorescence

    Energy Technology Data Exchange (ETDEWEB)

    Falkowski, P.G.; Kolber, Z.

    1992-10-01

    Photosynthesis can be described by target theory, At low photon flux densities, photosynthesis is a linear function of irradiance (I), The number of reaction centers (n), their effective absorption capture cross section {sigma}, and a quantum yield {phi}. As photosynthesis becomes increasingly light saturated, an increased fraction of reaction centers close. At light saturation the maximum photosynthetic rate is given as the product of the number of reaction centers (n) and their maximum electron transport rate (I/{tau}). Using active fluorometry it is possible to measure non-destructively and in real time the fraction of open or closed reaction centers under ambient irradiance conditions in situ, as well as {sigma} and {phi} {tau} can be readily, calculated from knowledge of the light saturation parameter, I{sub k} (which can be deduced by in situ by active fluorescence measurements) and {sigma}. We built a pump and probe fluorometer, which is interfaced with a CTD. The instrument measures the fluorescence yield of a weak probe flash preceding (f{sub 0}) and succeeding (f{sub 0}) a saturating pump flash. Profiles of the these fluorescence yields are used to derive the instantaneous rate of gross photosynthesis in natural phytoplankton communities without any incubation. Correlations with short-term simulated in situ radiocarbon measurements are extremely high. The average slope between photosynthesis derived from fluorescence and that measured by radiocarbon is 1.15 and corresponds to the average photosynthetic quotient. The intercept is about 15% of the maximum radiocarbon uptake and corresponds to the average net community respiration. Profiles of photosynthesis and sections showing the variability in its composite parameters reveal a significant effect of nutrient availability on biomass specific rates of photosynthesis in the ocean.

  10. On the absolute value of the air-fluorescence yield

    CERN Document Server

    Rosado, J; Arqueros, F

    2014-01-01

    The absolute value of the air-fluorescence yield is a key parameter for the energy reconstruction of extensive air showers registered by fluorescence telescopes. In previous publications, we reported a detailed Monte Carlo simulation of the air-fluorescence generation that allowed the theoretical evaluation of this parameter. This simulation has been upgraded in the present work. As a result, we determined an updated absolute value of the fluorescence yield of 7.9+-2.0 ph/MeV for the band at 337 nm in dry air at 800 hPa and 293 K, in