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Sample records for chinook enhancement study

  1. Yakima River Spring Chinook Enhancement Study Appendices, 1991 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Fast, David E.

    1991-05-01

    This document consists of the appendices for annual report DOE/BP/39461--9 which is summarized as follows. The population of Yakima River spring chinook salmon (Oncorhynchus tschawytscha) has been drastically reduced from historic levels reported to be as high as 250,000 adults (Smoker 1956). This reduction is the result of a series of problems including mainstem Columbia dams, dams within the Yakima itself, severely reduced flows due to irrigation diversions, outmigrant loss in irrigation canals, increased thermal and sediment loading, and overfishing. Despite these problems, the return of spring chinook to the Yakima River has continued at levels ranging from 854 to 9,442 adults since 1958. In October 1982, the Bonneville Power Administration contracted the Yakima Indian Nation to develop methods to increase production of spring chinook in the Yakima system. The Yakima Nation's current enhancement policy attempts to maintain the genetic integrity of the spring chinook stock native to the Yakima Basin. Relatively small numbers of hatchery fish have been released into the basin in past years. The goal of this study was to develop data that will be used to present management alternatives for Yakima River spring chinook. A major objective of this study is to determine the distribution, abundance and survival of wild Yakima River spring chinook. The second major objective of this study is to determine the relative effectiveness of different methods of hatchery supplementation. The last three major objectives of the study are to locate and define areas in the watershed that may be used for the rearing of spring chinook; to define strategies for enhancing natural production of spring chinook in the Yakima River; and to determine the physical and biological limitations on production within the system.

  2. Yakima River Spring Chinook Enhancement Study, 1985 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Fast, David E.

    1986-02-01

    The purpose was to evaluate enhancement methodologies that can be used to rebuild runs of spring chinook salmon in the Yakima River basin. The objectives were to: (1) determine the abundance, distribution and survival of naturally produced fry and smolts in the Yakima River; (2) evaluate different methods of fry and smolt supplementation into the natural rearing environment while maintaining as much as possible the gentic integrity of naturally produced stocks; (3) locate and define areas in the watershed which may be used for the rearing of spring chinook; (4) define strategies for enhancing natural production of spring chinook in the Yakima River; and (5) determine physical and biological limitations for production within the system.

  3. Yakima River Spring Chinook Enhancement Study, Fisheries Resource Management, Yakima Indian Nation1983 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Wasserman, Larry

    1984-02-01

    The purpose was to evaluate enhancement methodologies that can be used to rebuild runs of spring chinook to the Yakima River system. In January, 1983, 100,000 fish raised at Leavenworth National Fish Hatchery were transported to Nile Springs Rearing Ponds on the Naches River. These fish were allowed a volitional release as smolts in April. An additional 100,000 smolts were transported from Leavenworth Hatchery in April and immediately released to the Upper Yakima River. Relative survival of smolts from their points of release to a trap at Prosser (RM48) was 1.69:1 for fish from Nile Springs, versus the trucked smolts. The fish from Nile Springs arrived at Prosser and McNary Dam approximately 1 week earlier than the transported fish. To better determine the magnitude and location of releases, distribution and abundance studies were undertaken. There is a decrease in abundance from upstream areas over time, indicating a general downstream movement. In the Naches System, the lower Naches River is heavily utilized by juvenile spring chinook during the early summer. A preliminary study evaluated physical limitations of production. On a single evening 67 fish were killed on diversion screens at Chandler Canal. This constituted 5.7% of the wild spring chinook entering the canal and 8.2% of the fall chinook. The larger hatchery spring chinook sustained a 2.3% loss. Adult returns resulted in 443 redds in the Yakima System, with 360 in the Yakima River and 83 in the Naches System.

  4. Cryptic female choice enhances fertilization success and embryo survival in chinook salmon.

    Science.gov (United States)

    Rosengrave, Patrice; Montgomerie, Robert; Gemmell, Neil

    2016-03-30

    In this study, we investigated two potentially important intersexual postcopulatory gametic interactions in a population of chinook salmon (Oncorhynchus tshawytscha): (i) the effect of female ovarian fluid (OF) on the behaviour of spermatozoa during fertilization and (ii) the effects of multilocus heterozygosity (MLH) (as an index of male quality) and female-male genetic relatedness on sperm behaviour and male fertilization success when there is sperm competition in the presence of that OF. To do this, we conducted a series of in vitro competitive fertilization experiments and found that, when ejaculates from two males are competing for access to a single female's unfertilized eggs, fertilization success was significantly biased towards the male whose sperm swam fastest in the female's OF. Embryo survival--a measure of fitness--was also positively correlated with both sperm swimming speed in OF and male MLH, providing novel evidence that cryptic female choice is adaptive for the female, enhancing the early survival of her offspring and potentially influencing her fitness.

  5. Evidence that coded-wire-tagging procedures can enhance transmission of Renibacterium salmoninarum in chinook salmon

    Science.gov (United States)

    Elliott, D.G.; Pascho, R.J.

    2001-01-01

    Binary coded wire tags (CWTs) are used extensively for identification and management of anadromous salmonid populations. A study of bacterial kidney disease (BKD) in two brood year groups of hatchery-reared spring chinook salmon Oncorhynchus tshawytscha provided strong evidence that horizontal transmission of Renibacterium salmoninarum, the causative agent of BKD, might be enhanced by CWT-marking procedures. About 4 months after CWTs were implanted in the snouts of juvenile fish, 14-16 different tissues were sampled from each of 60 fish per brood year group for histological analysis. Of the fish that were positive for R. salmoninarum by histological examination, 41% (7 of 17) of the 1988 brood year fish and 24% (10 of 42) of the 1989 brood year fish had BKD lesions confined to the head near the site of tag implantation. These lesions often resulted in the destruction of tissues of one or both olfactory organs. No focal snout infections were observed in fish that had not been marked with CWTs. Further data obtained from tissue analyses by use of an enzyme-linked immunosorbent assay and a fluorescent antibody test for detection of R. salmoninarum supported the hypothesis that infections of R. salmoninarum can be initiated in the snout tissues of CWT-marked fish and then spread to other organs. The tagging procedures might promote transmission of the pathogen among fish via contaminated tagging needles, by facilitating the entry of pathogens through the injection wound, or both. Limited evidence from this study suggested that implantation of passive integrated transponder tags in the peritoneal cavities of fish might also promote the transmission of R. salmoninarum or exacerbate existing infections. The results indicated a need for strict sanitary procedures during the tagging of fish in populations positive for R. salmoninarum to reduce the probability of enhanced horizontal transmission of the pathogen.

  6. Study of Wild Spring Chinook Salmon in the John Day River System, 1985 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Lindsay, Robert B.

    1986-02-01

    A study of wild spring chinook salmon was conducted in the John Day River, Oregon: (1) recommend harvest regulations to achieve escapement goals in the John Day River; (2) recommend adtustments in timing of fish passage operations at Columbia River dams that will increase survival of John Day migrants; (3) recommend habitat or environmental improvements that will increase production of spring chinook salmon; (4) determine escapement goals for wild spring chinook salmon in the John Day River; and (5) recommend procedures for hatchery supplementation in the John Day River in the event it becomes necessary to artificially maintain the run of spring chinook salmon. Juveniles were captured as smolts during migration and as fingerlings during summer rearing. Juveniles were coded-wire tagged, and recoveries of tagged adults were used to assess contribution to ocean and Columbia River fisheries, timing of adult migrations through the Columbia River in relation to fishing seasons, and age and size of fish in fisheries. Scoop traps and seines were used to determine timing of smolt migrations through the John Day River. In addition, recoveries of tagged smolts at John Day Dam, The Dalles Dam, and Jones Beach were used to determine migration timing through the Columbia River. We examined freshwater life history of spring chinook salmon in the John Day River and related it to environmental factors. We looked at adult holding areas, spawning, incubation and emergence, fingerling rearing distribution, size and growth of juveniles and scales. Escapement goals fo the John Day River as well as reasons for declines in John Day stocks were determiend by using stock-recruitment analyses. Recommendations for hatchery supplementation in the John Day were based on results from other study objectives.

  7. Spawning Habitat Studies of Hanford Reach Fall Chinook Salmon (Oncorhynchus tshawytscha), Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Geist, David R.; Arntzen, Evan V.; Chien, Yi-Ju (Pacific Northwest National Laboratory)

    2009-03-02

    The Pacific Northwest National Laboratory conducted this study for the Bonneville Power Administration (BPA) with funding provided through the Northwest Power and Conservation Council(a) and the BPA Fish and Wildlife Program. The study was conducted in the Hanford Reach of the Columbia River. The goal of study was to determine the physical habitat factors necessary to define the redd capacity of fall Chinook salmon that spawn in large mainstem rivers like the Hanford Reach and Snake River. The study was originally commissioned in FY 1994 and then recommissioned in FY 2000 through the Fish and Wildlife Program rolling review of the Columbia River Basin projects. The work described in this report covers the period from 1994 through 2004; however, the majority of the information comes from the last four years of the study (2000 through 2004). Results from the work conducted from 1994 to 2000 were covered in an earlier report. More than any other stock of Pacific salmon, fall Chinook salmon (Oncorhynchus tshawytscha) have suffered severe impacts from the hydroelectric development in the Columbia River Basin. Fall Chinook salmon rely heavily on mainstem habitats for all phases of their life cycle, and mainstem hydroelectric dams have inundated or blocked areas that were historically used for spawning and rearing. The natural flow pattern that existed in the historic period has been altered by the dams, which in turn have affected the physical and biological template upon which fall Chinook salmon depend upon for successful reproduction. Operation of the dams to produce power to meet short-term needs in electricity (termed power peaking) produces unnatural fluctuations in flow over a 24-hour cycle. These flow fluctuations alter the physical habitat and disrupt the cues that salmon use to select spawning sites, as well as strand fish in near-shore habitat that becomes dewatered. The quality of spawning gravels has been affected by dam construction, flood protection, and

  8. Using a Genetic mixture model to study Phenotypic traits: Differential fecundity among Yukon river Chinook Salmon

    Science.gov (United States)

    Bromaghin, J.F.; Evenson, D.F.; McLain, T.H.; Flannery, B.G.

    2011-01-01

    Fecundity is a vital population characteristic that is directly linked to the productivity of fish populations. Historic data from Yukon River (Alaska) Chinook salmon Oncorhynchus tshawytscha suggest that length-adjusted fecundity differs among populations within the drainage and either is temporally variable or has declined. Yukon River Chinook salmon have been harvested in large-mesh gill-net fisheries for decades, and a decline in fecundity was considered a potential evolutionary response to size-selective exploitation. The implications for fishery conservation and management led us to further investigate the fecundity of Yukon River Chinook salmon populations. Matched observations of fecundity, length, and genotype were collected from a sample of adult females captured from the multipopulation spawning migration near the mouth of the Yukon River in 2008. These data were modeled by using a new mixture model, which was developed by extending the conditional maximum likelihood mixture model that is commonly used to estimate the composition of multipopulation mixtures based on genetic data. The new model facilitates maximum likelihood estimation of stock-specific fecundity parameters without first using individual assignment to a putative population of origin, thus avoiding potential biases caused by assignment error.The hypothesis that fecundity of Chinook salmon has declined was not supported; this result implies that fecundity exhibits high interannual variability. However, length-adjusted fecundity estimates decreased as migratory distance increased, and fecundity was more strongly dependent on fish size for populations spawning in the middle and upper portions of the drainage. These findings provide insights into potential constraints on reproductive investment imposed by long migrations and warrant consideration in fisheries management and conservation. The new mixture model extends the utility of genetic markers to new applications and can be easily adapted

  9. Spawning Habitat Studies of Hanford Reach Fall Chinook Salmon (Oncorhynchus tshawytscha), Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Geist, David R.; Arntzen, Evan V.; Chien, Yi-Ju (Pacific Northwest National Laboratory)

    2009-03-02

    The Pacific Northwest National Laboratory conducted this study for the Bonneville Power Administration (BPA) with funding provided through the Northwest Power and Conservation Council(a) and the BPA Fish and Wildlife Program. The study was conducted in the Hanford Reach of the Columbia River. The goal of study was to determine the physical habitat factors necessary to define the redd capacity of fall Chinook salmon that spawn in large mainstem rivers like the Hanford Reach and Snake River. The study was originally commissioned in FY 1994 and then recommissioned in FY 2000 through the Fish and Wildlife Program rolling review of the Columbia River Basin projects. The work described in this report covers the period from 1994 through 2004; however, the majority of the information comes from the last four years of the study (2000 through 2004). Results from the work conducted from 1994 to 2000 were covered in an earlier report. More than any other stock of Pacific salmon, fall Chinook salmon (Oncorhynchus tshawytscha) have suffered severe impacts from the hydroelectric development in the Columbia River Basin. Fall Chinook salmon rely heavily on mainstem habitats for all phases of their life cycle, and mainstem hydroelectric dams have inundated or blocked areas that were historically used for spawning and rearing. The natural flow pattern that existed in the historic period has been altered by the dams, which in turn have affected the physical and biological template upon which fall Chinook salmon depend upon for successful reproduction. Operation of the dams to produce power to meet short-term needs in electricity (termed power peaking) produces unnatural fluctuations in flow over a 24-hour cycle. These flow fluctuations alter the physical habitat and disrupt the cues that salmon use to select spawning sites, as well as strand fish in near-shore habitat that becomes dewatered. The quality of spawning gravels has been affected by dam construction, flood protection, and

  10. Fall transport - A study to compare smolt-to-adult return rates (SARs) of Snake River fall Chinook salmon under alternative transport and dam operational strategies

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This U.S. Army Corps of Engineers (USACE)-funded study that began in 2005 compares the SARs of PIT tagged juvenile hatchery Snake River fall Chinook that are split...

  11. Otolith output - Project to study alternative life history types of fall Chinook based on otoliths

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The life-history complexity of Snake River fall Chinook salmon has hindered efforts to manage the ESU. In particular, the existence of an overwintering behavior in a...

  12. John Day Fall Chinook/Salmon Mitigation Plan Acclimation and Imprinting Site Feasibility Study: Summary Report : Completion Report.

    Energy Technology Data Exchange (ETDEWEB)

    U.S. Fish and Wildlife Service; Sverdrup Corporation; United States. Bonneville Power Administration.

    1987-09-01

    The purpose of this Plan is to replace upriver bright fall chinook salmon which were lost by construction of the John Day Dam. This will be accomplished by releasing salmon fry and smolts, incubated in the Spring Creek and Bonneville Hatcheries, at several upriver locations. Prior to release it is desired to feed and acclimate the juvenile fish to relieve the stress of truck transport, and to imprint them to the release site. This will ultimately produce adult chinook salmon that return to their historic spawning areas through traditional common property fisheries. It will also provide sexually mature broodstock fish that can be captured and spawned to supplement continued hatchery operation. This report summarizes results of an engineering feasibility study done for 10 potential acclimation sites on the Columbia, Yakima and Walla Walla Rivers. A detailed report has been prepared for each site and each is bound separately.

  13. Acoustic Telemetry Studies of Juvenile Chinook Salmon Survival at the Lower Columbia Projects in 2006

    Energy Technology Data Exchange (ETDEWEB)

    Ploskey, Gene R.; Weiland, Mark A.; Hughes, James S.; Zimmerman, Shon A.; Durham, Robin E.; Fischer, Eric S.; Kim, Jina; Townsend, Richard L.; Skalski, John R.; McComas, Roy L.

    2008-02-01

    The Portland District of the U.S. Army Corps of Engineers contracted with the Pacific Northwest National Laboratory (PNNL) to conduct three studies using acoustic telemetry to estimate detection probabilities and survival of juvenile Chinook salmon at three hydropower projects on the lower Columbia River. The primary goals were to estimate detection and survival probabilities based on sampling with JSATS equipment, assess the feasibility of using JSATS for survival studies, and estimate sample sizes needed to obtain a desired level of precision in future studies. The 2006 JSATS arrays usually performed as well or better than radio telemetry arrays in the JDA and TDA tailwaters, and underperformed radio arrays in the BON tailwater, particularly in spring. Most of the probabilities of detection on at least one of all arrays in a tailwater exceeded 80% for each method, which was sufficient to provide confidence in survival estimates. The probability of detection on one of three arrays includes survival and detection probabilities because fish may die or pass all three arrays undetected but alive.

  14. Fall Chinook Salmon Survival and Supplementation Studies in the Snake River Reservoirs, 1996 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Williams, John G.; Bjornn (Bjomn), Theodore C.

    1998-05-01

    In 1996, the National Marine Fisheries Service, the Nez Perce Tribe, and the U.S. Fish and Wildlife Service completed the second year of cooperative research to investigate migrational characteristics of subyearling fall chinook salmon in the Snake River Basin. In spring and early summer, we captured natural subyearling fall chinook salmon by beach seine, PIT tagged them, and released them in two reaches of the Snake River. Also, subyearling fall chinook salmon reared at Lyons Ferry Hatchery were PIT tagged at the hatchery, transported, and released weekly at Pittsburg Landing on the Snake River and Big Canyon Creek on the Clearwater River to collect data on survival detection probabilities, and travel time.

  15. Yakima River Spring Chinook Enhancement Study, 1988 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Fast, David E.

    1988-12-01

    Smolt outmigration was monitored at Wapatox on the Naches River and Prosser on the lower Yakima. The spring outmigration at Wapatox was estimated to be smolts. The survival from egg to smolt was calculated using the 1986 redd counts and the 1988 smolt outmigration at Prosser. The smolt to adult survival was calculated based on the 1983 smolt outmigration estimated at Prosser and the 1984 return of jacks (3 year old fish), the 1985 return of four year old adults, and the 1986 return of five year old fish to the Yakima River. 13 refs., 4 figs., 47 tabs.

  16. Comparative Survival Study (CSS) of PIT-Tagged Spring/Summer Chinook and Summer Steelhead : 2008 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Comparative Survival Study Oversight Committee and Fish Passage Center

    2008-12-02

    The Comparative Survival Study (CSS; BPA Project 199602000) began in 1996 with the objective of establishing a long term dataset of the survival rate of annual generations of salmon from their outmigration as smolts to their return to freshwater as adults to spawn (smolt-to-adult return rate; SAR). The study was implemented with the express need to address the question whether collecting juvenile fish at dams and transporting them downstream in barges and trucks and releasing them downstream of Bonneville Dam was compensating for the effect of the Federal Columbia River Power System (FCRPS) on survival of Snake Basin spring/summer Chinook salmon migrating through the hydrosystem. The Completion of this annual report for the CSS signifies the 12th outmigration year of hatchery spring/summer Chinook salmon marked with Passive Integrated Transponder (PIT) tags as part of the CSS and the 9th complete brood year return as adults of those PIT-tagged fish (report covers adult returns from 1997-2006 hatchery Chinook juvenile migrations). In addition, the CSS has provided PIT-tags to on-going tagging operations for wild Chinook since 2002 (report covers adult returns from 1994-2006 wild Chinook juvenile migrations). The CSS tags wild steelhead on the lower Clearwater River and utilized wild and hatchery steelhead from other tagging operations in evaluations of transportation (report covers adult returns from 1997-2005 wild and hatchery steelhead migrations). The primary purpose of this report is to update the time series of smolt-to-adult survival rate data and related parameters with additional years of data since the completion of the CSS 10-yr retrospective analysis report (Schaller et al 2007). The 10-yr report provided a synthesis of the results from this ongoing study, the analytical approaches employed, and the evolving improvements incorporated into the study as reported in CSS annual progress reports. This current report specifically addresses the constructive

  17. Comparative Survival Study (CSS) of PIT-Tagged Spring/Summer Chinook and Summer Steelhead : 2008 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Comparative Survival Study Oversight Committee and Fish Passage Center

    2008-12-02

    The Comparative Survival Study (CSS; BPA Project 199602000) began in 1996 with the objective of establishing a long term dataset of the survival rate of annual generations of salmon from their outmigration as smolts to their return to freshwater as adults to spawn (smolt-to-adult return rate; SAR). The study was implemented with the express need to address the question whether collecting juvenile fish at dams and transporting them downstream in barges and trucks and releasing them downstream of Bonneville Dam was compensating for the effect of the Federal Columbia River Power System (FCRPS) on survival of Snake Basin spring/summer Chinook salmon migrating through the hydrosystem. The Completion of this annual report for the CSS signifies the 12th outmigration year of hatchery spring/summer Chinook salmon marked with Passive Integrated Transponder (PIT) tags as part of the CSS and the 9th complete brood year return as adults of those PIT-tagged fish (report covers adult returns from 1997-2006 hatchery Chinook juvenile migrations). In addition, the CSS has provided PIT-tags to on-going tagging operations for wild Chinook since 2002 (report covers adult returns from 1994-2006 wild Chinook juvenile migrations). The CSS tags wild steelhead on the lower Clearwater River and utilized wild and hatchery steelhead from other tagging operations in evaluations of transportation (report covers adult returns from 1997-2005 wild and hatchery steelhead migrations). The primary purpose of this report is to update the time series of smolt-to-adult survival rate data and related parameters with additional years of data since the completion of the CSS 10-yr retrospective analysis report (Schaller et al 2007). The 10-yr report provided a synthesis of the results from this ongoing study, the analytical approaches employed, and the evolving improvements incorporated into the study as reported in CSS annual progress reports. This current report specifically addresses the constructive

  18. Quantifying Temperature Effects on Fall Chinook Salmon

    Energy Technology Data Exchange (ETDEWEB)

    Jager, Yetta [ORNL

    2011-11-01

    The motivation for this study was to recommend relationships for use in a model of San Joaquin fall Chinook salmon. This report reviews literature pertaining to relationships between water temperature and fall Chinook salmon. The report is organized into three sections that deal with temperature effects on development and timing of freshwater life stages, temperature effects on incubation survival for eggs and alevin, and temperature effects on juvenile survival. Recommendations are made for modeling temperature influences for all three life stages.

  19. Fall Chinook Salmon Survival and Supplementation Studies in the Snake River and Lower Snake River Reservoirs, 1997 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Muir, William D.; Connor, William P.; Arnsberg, Billy D.

    1999-03-01

    In 1997, the National Marine Fisheries Service, the U.S. Fish and Wildlife Service, and the Nez Perce Tribe completed the third year of research to investigate migrational characteristics of subyearling fall chinook salmon in the Snake River Basin.

  20. Comparative Survival Study (CSS) of Hatchery PIT-tagged Spring/Summer Chinook; Migration Years 1997-2000 Mark/Recapture Activities, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Bouwes, Nick (EcoLogical Research, Providence, UT); Petrosky, Charlie (Idaho Department of Fish and Game, Boise ID); Schaller, Howard (US Fish and Wildlife Service, Columbia River Fisheries Program Office, Vancouver, WA)

    2002-02-01

    The Comparative Survival Study (CSS) was initiated in 1996 as a multi-year program of the fishery agencies and tribes to estimate survival rates over different life stages for spring and summer chinook (hereafter, chinook) produced in major hatcheries in the Snake River basin and from selected hatcheries in the lower Columbia River. Much of the information evaluated in the CSS is derived from fish tagged with Passive Integrated Transponder (PIT) tags. A comparison of survival rates of chinook marked in two different regions (which differ in the number of dams chinook have to migrate through) provides insight into the effects of the Snake/Columbia hydroelectric system (hydrosystem). The CSS also compares the smolt-to-adult survival rates (SARs) for Snake River chinook that were transported versus those that migrated in-river to below Bonneville Dam. Additional comparisons can be made within in-river experiences as well comparison between the different collector projects from which smolts are transported. CSS also compares these survival rates for wild Snake River spring and summer chinook. These comparisons generate information regarding the relative effects of the current management actions used to recover this listed species.Scientists and managers have recently emphasized the importance of delayed hydrosystem mortality to long-term management decisions. Delayed hydrosystem mortality may be related to the smolts. experience in the Federal Columbia River Power System, and could occur for both smolts that migrate in-river and smolts that are transported. The CSS PIT tag information on in-river survival rates and smolt-to-adult survival rates (SARs) of transported and in-river fish are relevant to estimation of ''D'', which partially describes delayed hydrosystem mortality. ''D'', or differential delayed mortality, is the differential survival rate of transported fish relative to fish that migrate in-river, as measured from

  1. Early life history study of Grande Ronde River Basin chinook salmon. Annual progress report, September 1, 1994--August 31, 1995

    Energy Technology Data Exchange (ETDEWEB)

    Keefe, M.; Anderson, D.J.; Carmichasel, R.W.; Jonasson, B.C.

    1996-06-01

    The Grande Ronde River originates in the Blue Mountains in northeast Oregon and flows 334 kilometers to its confluence with the Snake River near Rogersburg, Washington. Historically, the Grande Ronde River produced an abundance of salmonids including stocks of spring, summer and fall chinook salmon, sockeye salmon, coho salmon, and summer steelhead. During the past century, numerous factors have caused the reduction of salmon stocks such that only stocks of spring chinook salmon and summer steelhead remain. The sizes of spring chinook salmon populations in the Grande Ronde basin also have been declining steadily and are substantially depressed from estimates of historic levels. It is estimated that prior to the construction of the Columbia and Snake River dams, more than 20,000 adult spring chinook salmon returned to spawn in the Grande Ronde River basin. A spawning escapement of 12,200 adults was estimated for the Grande Ronde River basin in 1957. Recent population estimates have been variable year to year, yet remain a degree of magnitude lower than historic estimates. In 1992, the escapement estimate for the basin was 1,022 adults (2.4 {times} number of redds observed). In addition to a decline in population abundance, a constriction of spring chinook salmon spawning distribution is evident in the Grande Ronde basin. Historically, 21 streams supported spawning chinook salmon, yet today the majority of production is limited to eight tributary streams and the mainstem upper Grande Ronde River. Numerous factors are thought to contribute to the decline of spring chinook salmon in the Snake River and its tributaries. These factors include passage problems and increased mortality of juvenile and adult migrants at mainstem Columbia and Snake river dams, overharvest, and habitat degradation associated with timber, agricultural, and land development practices. More than 80% of anadromous fish habitat in the upper Grande Ronde River is considered to be degraded.

  2. Intensive Evaluation and Monitoring of Chinook Salmon and Steelhead Trout Production, Crooked River and Upper Salmon River Sites, 1995 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Kiefer, Russell B.; Lockhart, Jerald N.

    1999-10-01

    The purpose of this intensive monitoring project is to determine the number of returning chinook salmon and steelhead trout adults necessary to achieve optimal smolt production and develop habitat enhancement mitigation accounting based on increases in wild/natural smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects. The project to date has developed good information on the relationship between chinook salmon adult escapement and smolt production at low to medium seeding levels. Adult chinook salmon escapements have been too low for us to test carrying capacity. For steelhead trout, they have developed a relationship between parr populations and smolt production at low to high seeding levels, with limited information on carrying capacity.

  3. Comparative Survival Study (CSS) of Hatchery PIT-tagged Spring/Summer Chinook; Migration Years 1997-2000 Mark/Recapture Activities and Bootstrap Analysis, 2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Berggren Thomas J.; Franzoni, Henry; Basham, Larry R. (Columbia Basin Fish and Wildlife Authority, Fish Passage Center, Portland, OR)

    2005-04-01

    The Comparative Survival Study (CSS) was initiated in 1996 as a multi-year program of the fishery agencies and tribes to estimate survival rates over different life stages for spring and summer chinook (hereafter, chinook) produced in major hatcheries in the Snake River basin and from selected hatcheries in the lower Columbia River. Much of the information evaluated in the CSS is derived from fish tagged with Passive Integrated Transponder (PIT) tags. A comparison of survival rates of chinook marked in two different regions (which differ in the number of dams chinook have to migrate through) provides insight into the effects of the Snake/Columbia hydroelectric system (hydrosystem). The CSS also compares the smolt-to-adult survival rates (SARs) for Snake River chinook that were transported versus those that migrated in-river to below Bonneville Dam. Additional comparisons can be made within in-river experiences as well comparison between the different collector projects from which smolts are transported. CSS also compares these survival rates for wild Snake River spring and summer chinook. These comparisons generate information regarding the relative effects of the current management actions used to recover this listed species. Scientists and managers have recently emphasized the importance of delayed hydrosystem mortality to long-term management decisions. Delayed hydrosystem mortality may be related to the smolts experience in the Federal Columbia River Power System, and could occur for both smolts that migrate in-river and smolts that are transported. The CSS PIT tag information on in-river survival rates and smolt-to-adult survival rates (SARs) of transported and in-river fish are relevant to estimation of ''D'', which partially describes delayed hydrosystem mortality. The parameter D is the differential survival rate of transported fish relative to fish that migrate in-river, as measured from below Bonneville Dam to adults returning to Lower

  4. Comparative Survival Study (CSS) of Hatchery PIT-tagged Spring/Summer Chinook; Migration Years 1997-2000 Mark/Recapture Activities and Bootstrap Analysis, 2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Berggren Thomas J.; Franzoni, Henry; Basham, Larry R. (Columbia Basin Fish and Wildlife Authority, Fish Passage Center, Portland, OR)

    2005-04-01

    The Comparative Survival Study (CSS) was initiated in 1996 as a multi-year program of the fishery agencies and tribes to estimate survival rates over different life stages for spring and summer chinook (hereafter, chinook) produced in major hatcheries in the Snake River basin and from selected hatcheries in the lower Columbia River. Much of the information evaluated in the CSS is derived from fish tagged with Passive Integrated Transponder (PIT) tags. A comparison of survival rates of chinook marked in two different regions (which differ in the number of dams chinook have to migrate through) provides insight into the effects of the Snake/Columbia hydroelectric system (hydrosystem). The CSS also compares the smolt-to-adult survival rates (SARs) for Snake River chinook that were transported versus those that migrated in-river to below Bonneville Dam. Additional comparisons can be made within in-river experiences as well comparison between the different collector projects from which smolts are transported. CSS also compares these survival rates for wild Snake River spring and summer chinook. These comparisons generate information regarding the relative effects of the current management actions used to recover this listed species. Scientists and managers have recently emphasized the importance of delayed hydrosystem mortality to long-term management decisions. Delayed hydrosystem mortality may be related to the smolts experience in the Federal Columbia River Power System, and could occur for both smolts that migrate in-river and smolts that are transported. The CSS PIT tag information on in-river survival rates and smolt-to-adult survival rates (SARs) of transported and in-river fish are relevant to estimation of ''D'', which partially describes delayed hydrosystem mortality. The parameter D is the differential survival rate of transported fish relative to fish that migrate in-river, as measured from below Bonneville Dam to adults returning to Lower

  5. Comparative Survival Study (CSS) of Hatchery PIT-tagged Spring/Summer Chinook; Migration Years 1997-2002 Mark/Recapture Activities and Bootstrap Analysis, 2003-2004 Biennial Report.

    Energy Technology Data Exchange (ETDEWEB)

    Berggren, Thomas J.; Franzoni, Henry; Basham, Larry R. (Columbia Basin Fish and Wildlife Authority, Fish Passage Center, Portland, OR)

    2003-11-01

    The Comparative Survival Study (CSS) was initiated in 1996 as a multi-year program of the fishery agencies and tribes to estimate survival rates over different life stages for spring and summer Chinook (hereafter, Chinook) produced in major hatcheries in the Snake River basin and from selected hatcheries in the lower Columbia River. Much of the information evaluated in the CSS is derived from fish tagged with Passive Integrated Transponder (PIT) tags. A comparison of survival rates of Chinook marked in two different regions (which differ in the number of dams Chinook have to migrate through) provides insight into the effects of the Snake/Columbia hydroelectric system (hydrosystem). The CSS also compares the smolt-to-adult survival rates (SARs) for Snake River Chinook that were transported versus those that migrated in-river to below Bonneville Dam. Additional comparisons can be made within in-river experiences as well as comparison between the different collector projects from which smolts are transported. CSS also compares survival rates for wild Snake River spring and summer Chinook. These comparisons generate information regarding the relative effects of the current management actions used to recover this listed species. Scientists and managers have recently emphasized the importance of delayed hydrosystem mortality to long-term management decisions. Delayed hydrosystem mortality may be related to the smolts experience in the Federal Columbia River Power System, and could occur for both smolts that migrate in-river and smolts that are transported. The CSS PIT tag information on in-river survival rates and smolt-to-adult survival rates (SARs) of transported and in-river fish are relevant to estimation of ''D'', which partially describes delayed hydrosystem mortality. The parameter D is the differential survival rate of transported fish relative to fish that migrate in-river, as measured from below Bonneville Dam to adults returning to Lower

  6. A test for the relative strength of maternal and stock effects in spring Chinook salmon (Oncorhynchus tshawytscha) from two different hatcheries (Study site: Warm Springs Hatchery; Stocks: Warm Springs Hatchery and Carson Hatchery; Year class: 1993): Chapter 10

    Science.gov (United States)

    Wetzel, Lisa A.; Rubin, Stephen P.; Reisenbichler, Reginald R.; Stenberg, Karl D.; Rubin, Stephen P.; Reisenbichler, Reginald R.; Wetzel, Lisa A.; Hayes, Michael C.

    2012-01-01

    An experiment was undertaken to determine the relative strength of maternal and stock effects in Chinook salmon (Oncorhynchus tshawytscha) reared in a common environment, as a companion study to our investigation of hatchery and wild Chinook salmon. Pure-strain and reciprocal crosses were made between two hatchery stocks (Carson and Warm Springs National Fish Hatcheries). The offspring were reared together in one of the hatcheries to the smolt stage, and then were transferred to a seawater rearing facility (USGS-Marrowstone Field Station). Differences in survival, growth and disease prevalence were assessed. Fish with Carson parentage grew to greater size at the hatchery and in seawater than the pure-strain Warm Springs fish, but showed higher mortality at introduction to seawater. The analyses of maternal and stock effects were inconclusive, but the theoretical responses to different combinations of maternal and stock effects may be useful in interpreting stock comparison studies.

  7. Color photographic index of fall Chinook salmon embryonic development and accumulated thermal units.

    Directory of Open Access Journals (Sweden)

    James W Boyd

    Full Text Available BACKGROUND: Knowledge of the relationship between accumulated thermal units and developmental stages of Chinook salmon embryos can be used to determine the approximate date of egg fertilization in natural redds, thus providing insight into oviposition timing of wild salmonids. However, few studies have documented time to different developmental stages of embryonic Chinook salmon and no reference color photographs are available. The objectives of this study were to construct an index relating developmental stages of hatchery-reared fall Chinook salmon embryos to time and temperature (e.g., degree days and provide high-quality color photographs of each identified developmental stage. METHODOLOGY/PRINCIPAL FINDINGS: Fall Chinook salmon eggs were fertilized in a hatchery environment and sampled approximately every 72 h post-fertilization until 50% hatch. Known embryonic developmental features described for sockeye salmon were used to describe development of Chinook salmon embryos. A thermal sums model was used to describe the relationship between embryonic development rate and water temperature. Mean water temperature was 8.0 degrees C (range; 3.9-11.7 degrees C during the study period. Nineteen stages of embryonic development were identified for fall Chinook salmon; two stages in the cleavage phase, one stage in the gastrulation phase, and sixteen stages in the organogenesis phase. The thermal sums model used in this study provided similar estimates of fall Chinook salmon embryonic development rate in water temperatures varying from 3.9-11.7 degrees C (mean=8 degrees C to those from several other studies rearing embryos in constant 8 degrees C water temperature. CONCLUSIONS/SIGNIFICANCE: The developmental index provides a reasonable description of timing to known developmental stages of Chinook salmon embryos and was useful in determining developmental stages of wild fall Chinook salmon embryos excavated from redds in the Columbia River. This index

  8. Habitat use by subyearling Chinook and coho salmon in Lake Ontario tributaries

    Science.gov (United States)

    Johnson, James H.

    2014-01-01

    The habitat use of subyearling Chinook salmon (Oncorhynchus tshawytscha) and coho salmon (Oncorhynchus kisutch) was examined in three tributaries of Lake Ontario. A total of 1781 habitat observations were made on Chinook salmon (698) and coho salmon (1083). During both spring and fall, subyearling coho salmon used pool habitat with abundant cover. During spring, principal component analysis revealed that water depth was the most important variable governing subyearling Chinook salmon habitat use. Substrate materials used by Chinook salmon in the spring and coho salmon in the fall were significantly smaller than were present on average within the study reaches. When the two species occurred sympatrically during spring they exhibited similar habitat selection. Although the habitat used by coho salmon in Lake Ontario tributaries was consistent with observations of habitat use in their native range, higher water velocities were less important to Chinook salmon than has previously been reported.

  9. Identification of the Spawning, Rearing and Migratory Requirements of Fall Chinook Salmon in the Columbia River Basin, Annual Report 1992.

    Energy Technology Data Exchange (ETDEWEB)

    Rondorf, Dennis W.; Miller, William H.

    1994-03-01

    This document is the 1992 annual progress report for selected studies of fall chinook Salmon Oncorhynchus tshawytscha conducted by the National Biological Survey (NBS) and the US Fish and Wildlife Service. The decline in abundance of fall chinook salmon in the Snake River basin has become a growing concern. Effective recovery efforts for fall chinook salmon cannot be developed until we increase our knowledge of the factors that are limiting the various life history stages. This study attempts to identify those physical and biological factors which influence spawning of fall chinook salmon in the free-flowing Snake River and their rearing and seaward migration through Columbia River basin reservoirs.

  10. Status and Monitoring of Natural and Supplemented Chinook Salmon in Johnson Creek, Idaho, 2006-2007 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rabe, Craig D.; Nelson, Douglas D. [Nez Perce Tribe

    2008-11-17

    The Nez Perce Tribe Johnson Creek Artificial Propagation Enhancement Project (JCAPE) has conducted juvenile and adult monitoring and evaluation studies for its 10th consecutive year. Completion of adult and juvenile Chinook salmon studies were conducted for the purpose of evaluating a small-scale production initiative designed to increase the survival of a weak but recoverable spawning aggregate of summer Chinook salmon Oncorhynchus tshawytscha. The JCAPE program evaluates the life cycle of natural origin (NOR) and hatchery origin (HOR) supplementation fish to quantify the key performance measures: abundance, survival-productivity, distribution, genetics, life history, habitat, and in-hatchery metrics. Operation of a picket style weir and intensive multiple spawning ground surveys were completed to monitor adult Chinook salmon and a rotary screw trap was used to monitor migrating juvenile Chinook salmon in Johnson Creek. In 2007, spawning ground surveys were conducted on all available spawning habitat in Johnson Creek and one of its tributaries. A total of 63 redds were observed in the index reach and 11 redds for all other reaches for a combined count of 74 redds. Utilization of carcass recovery surveys and adult captures at an adult picket weir yielded a total estimated adult escapement to Johnson Creek of 438 Chinook salmon. Upon deducting fish removed for broodstock (n=52), weir mortality/ known strays (n=12), and prespawning mortality (n=15), an estimated 359 summer Chinook salmon were available to spawn. Estimated total migration of brood year 2005 NOR juvenile Chinook salmon at the rotary screw trap was calculated for three seasons (summer, fall, and spring). The total estimated migration was 34,194 fish; 26,671 of the NOR migrants left in the summer (July 1 to August 31, 2005) as fry/parr, 5,852 left in the fall (September 1 to November 21, 2005) as presmolt, and only 1,671 NOR fish left in the spring (March 1 to June 30, 2006) as smolt. In addition, there

  11. Using remotely sensed imagery and GIS to monitor and research salmon spawning: A case study of the Hanford Reach fall chinook (Oncorhynchus Tshawytscha)

    Energy Technology Data Exchange (ETDEWEB)

    RH Visser

    2000-03-16

    The alteration of ecological systems has greatly reduced salmon populations in the Pacific Northwest. The Hanford Reach of the Columbia River, for example, is a component of the last ecosystem in eastern Washington State that supports a relatively healthy population of fall chinook salmon ([Oncorhynchus tshawytscha], Huntington et al. 1996). This population of fall chinook may function as a metapopulation for the Mid-Columbia region (ISG 1996). Metapopulations can seed or re-colonize unused habitat through the mechanism of straying (spawning in non-natal areas) and may be critical to the salmon recovery process if lost or degraded habitat is restored (i.e., the Snake, Upper Columbia, and Yakima rivers). For these reasons, the Hanford Reach fall chinook salmon population is extremely important for preservation of the species in the Columbia River Basin. Because this population is important to the region, non-intrusive techniques of analysis are essential for researching and monitoring population trends and spawning activities.

  12. Pilot Study of the Effects of Simulated Turbine Passage Pressure on Juvenile Chinook Salmon Acclimated with Access to Air at Absolute Pressures Greater than Atmospheric

    Energy Technology Data Exchange (ETDEWEB)

    Carlson, Thomas J.; Abernethy, Cary S.

    2005-04-28

    The impacts of pressure on juvenile salmon who pass through the turbines of hydroelectric dams while migrating downstream on the Columbia and Snake rivers has not been well understood, especially as these impacts relate to injury to the fish's swim bladder. The laboratory studies described here were conducted by Pacific Northwest National Laboratory for the US Army Corps of Engineers Portland District at PNNL's fisheries research laboratories in 2004 to investigate the impacts of simulated turbine passage pressure on fish permitted to achieve neutral buoyancy at pressures corresponding to depths at which they are typically observed during downstream migration. Two sizes of juvenile Chinook salmon were tested, 80-100mm and 125-145mm total length. Test fish were acclimated for 22 to 24 hours in hyperbaric chambers at pressures simulating depths of 15, 30, or 60 ft, with access to a large air bubble. High rates of deflated swim bladders and mortality were observed. Our results while in conclusive show that juvenile salmon are capable of drawing additional air into their swimbladder to compensate for the excess mass of implanted telemetry devices. However they may pay a price in terms of increased susceptibility to injury, predation, and death for this additional air.

  13. Comparative Survival [Rate] Study (CSS) of Hatchery PIT-tagged Chinook; Migration Years 1996-1998 Mark/Recapture Activities, 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Berggren, Thomas J.; Basham, Larry R. (Columbia Basin Fish and Wildlife Authority, Fish Passage Center, Portland, OR)

    2000-10-01

    The Comparative Survival Rate Study (CSS) is a multi-year program of the fishery agencies and tribes to measure the smolt-to-adult survival rates of hatchery spring and summer chinook at major production hatcheries in the Snake River basin and at selected hatcheries in the lower Columbia River. The CSS also compares the smolt-to-adult survival rates for Snake River basin chinook that were transported versus those that migrated in-river to below Bonneville Dam. Estimates of smolt-to-adult survival rates will be made both from Lower Granite Dam back to Lower Granite Dam (upriver stocks) and from the hatchery back to the hatchery (upriver and downriver stocks). This status report covers the first three migration years, 1996 to 1998, of the study. Study fish were implanted with a PIT (Passive Integrated Transponder) tag which allows unique identification of individual fish. Beginning in 1997, a predetermined proportion of the PIT tagged study fish in the collection/bypass channel at the transportation sites, such as Lower Granite and Little Goose dams, was purposely routed to the raceways for transportation and the rest was routed back to the river. Two categories of in-river migrating fish are used in this study. The in-river group most representative of the non-tagged fish are fish that migrate past Lower Granite, Little Goose, and Lower Monumental dams undetected in the bypass systems. This is because all non-tagged fish collected at these three dams are currently being transported. The other in-river group contains those fish remaining in-river below Lower Monumental Dam that had previously been detected at one or more dams. The number of fish starting at Lower Granite dam that are destined to one of these two in-river groups must be estimated. The Jolly-Seber capture-recapture methodology was used for that purpose. Adult (including jacks) study fish returning to the hatcheries in the Snake River basin were sampled at the Lower Granite Dam adult trap. There the PIT

  14. Intensive Evaluation and Monitoring of Chinook Salmon and Steelhead Trout Production, Crooked River and Upper Salmon River Sites, 1992 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Kiefer, Russell B.; Lockhart, Jerald N.

    1994-12-01

    The purpose of this intensive monitoring project is to determine the number of returning chinook salmon Oncorhynchus tshawytscha and steelhead trout 0. mykiss adults necessary to achieve optimal smolt production, and develop mitigation accounting based on increases in smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects.

  15. Detection of PIT-tagged subyearling Chinook salmon at a Snake River dam: Implications for summer flow augmentation

    Science.gov (United States)

    Connor, W.P.; Burge, H.L.; Bennett, D.H.

    1998-01-01

    Rearing subyearling chinook salmon Oncorhynchus tshawytscha (≥60 mm in fork length) were captured in the Snake River and tagged with passive integrated transponders to provide an index of their survival to Lower Granite Dam, the first of eight dams encountered by seaward migrants. Water was released from reservoirs upstream of Lower Granite Dam to augment summer flows and thereby increase subyearling chinook salmon survival. Mean summer flow and maximum summer water temperature in Lower Granite Reservoir were highly correlated (N = 4; r = −0.999). Acknowledging this correlation, we conducted two separate least-squares regressions using detection rate as the dependent variable. Detection rate at Lower Granite Dam was positively related to mean summer flow (N = 4; r 2 = 0.993; P = 0.003) and negatively related to maximum summer water temperature (N = 4; r 2 = 0.984; P = 0.008). Summer flow augmentation increased flow and decreased water temperature in Lower Granite Reservoir especially in low-flow years. Our results support summer flow augmentation as a beneficial interim recovery measure for enhancing survival of subyearling chinook salmon in the Snake River. Additional research should include replicate within-year releases of PIT-tagged subyearlings as well as studies of fish guidance efficiency.

  16. Evaluation of Juvenile Fall Chinook Stranding on the Hanford Reach, 1997-1999 Interim Report.

    Energy Technology Data Exchange (ETDEWEB)

    Wagner, Paul; Nugent, John; Price, William (Washington Department of Fish and Wildlife, Olympia, WA)

    1999-02-15

    Pilot work conducted in 1997 to aid the development of the study for the 1998 Evaluation of Juvenile Fall Chinook Stranding on The Hanford Reach. The objectives of the 1997 work were to: (1) identify juvenile chinook production and rearing areas..., (2) identify sampling sites and develop the statistical parameters necessary to complete the study, (3) develop a study plan..., (4) conduct field sampling activities...

  17. Emigration of Natural and Hatchery Chinook Salmon and Steelhead Smolts from the Imnaha River, Oregon, Progress Report 2000-2002.

    Energy Technology Data Exchange (ETDEWEB)

    Cleary, Peter; Kucera, Paul; Blenden, Michael

    2003-12-01

    This report summarizes the emigration studies of the Nez Perce Tribe in the Imnaha River subbasin during the 2001 and 2002 migration years. A migration year for the Imnaha River is defined here as beginning July 31 of the previous year and ending July 30 the following year. The conclusion of the studies at the end of migration year 2002 marked the 11th year of the Nez Perce Tribe's Lower Snake River Emigration Studies. The Nez Perce Tribe has participated in the Fish Passage Center's Smolt Monitoring Program for nine of the 11 years. These studies collect and tag juvenile chinook salmon and steelhead at two locations in the fall, rkm 74 and rkm 7, and at rkm 7 during the spring. Data from captured and tagged fish provide an evaluation of hatchery production and releases strategies, post release survival of hatchery chinook salmon, abundance of natural chinook salmon, and downstream survival and arrival timing of natural and hatchery chinook salmon and steelhead. The hydrologic conditions that migrating fish encountered in 2001 were characterized as a drought and conditions in 2002 were characterized as below average. Hatchery chinook salmon had a mean fork length that was 34 mm greater in 2001 and 35 mm greater in 2002 than the mean fork length of natural chinook smolts. Hatchery steelhead smolt mean fork lengths were 39 mm greater than natural steelhead smolts in 2001 and 44 mm greater than natural steelhead smolt fork lengths in 2002. A significant difference (p < 0.05) between hatchery and natural chinook salmon and steelhead fork lengths has been documented by these emigration studies from 1997 to 2002. Hatchery chinook salmon were volitionally released in 2001 and 2002 and the 90% arrivals for 2001 and 2002 at the lower rkm 7 trap were within the range of past observations of 22 to 38 days observed in 1999 and 2000. We estimated that 93.9% of the 123,014 hatchery chinook salmon released in 2001 survived to the lower trap and 90.2% of the 303

  18. Evaluation of Fall Chinook and Chum Salmon Spawning below Bonneville Dam; 2003-2004 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    van der Naald, Wayne; Duff, Cameron; Brooks, Robert (Oregon Department of Fish and Wildlife, Columbia River Section, John Day, OR)

    2005-01-01

    In 2003 a total of 253 adult fall chinook and 113 chum were sampled for biological data in the Ives and Pierce islands area below Bonneville Dam. Vital statistics were developed from 221 fall chinook and 109 chum samples. The peak redd count for fall chinook was 190. The peak redd count for chum was 262. Peak spawning time for fall chinook was set at approximately 24 November. Peak spawning time for chum occurred approximately 24 November. There were estimated to be a total of 1,533 fall chinook spawning below Bonneville Dam in 2003. The study area's 2003 chum population was estimated to be 688 spawning fish. Temperature unit data suggests that below Bonneville Dam 2003 brood bright stock, fall chinook emergence began on January 6, 2004 and ended 28 April 2004, with peak emergence occurring 13 April. 2003 brood juvenile chum emergence below Bonneville Dam began 22 February and continued through 15 April 2004. Peak chum emergence took place 25 March. A total of 25,433 juvenile chinook and 4,864 juvenile chum were sampled between the dates of 20 January and 28 June 2004 below Bonneville Dam. Juvenile chum migrated from the study area in the 40-55 mm fork length range. Migration of chum occurred during the months of March, April and May. Sampling results suggest fall chinook migration from rearing areas took place during the month of June 2004 when juvenile fall chinook were in the 65 to 80 mm fork length size range. Adult and juvenile sampling below Bonneville Dam provided information to assist in determining the stock of fall chinook and chum spawning and rearing below Bonneville Dam. Based on observed spawning times, adult age and sex composition, juvenile emergence timing, juvenile migration timing and juvenile size at the time of migration, it appears that in 2003 all of the fall chinook using the area below Bonneville Dam were of a late-spawning, bright stock. Observed spawning times, adult age and sex composition, GSI and DNA analysis, juvenile emergence

  19. Intensive Evaluation and Monitoring of Chinook Salmon and Steelhead Trout Production, Crooked River and Upper Salmon River Sites, 1994 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Kiefer, Russell B.; Lockhart, Jerald N.

    1997-06-01

    The purpose of this intensive monitoring project is to determine the number of returning chinook and steelhead adults necessary to achieve optimal smolt production, and develop mitigation accounting based on increases in smolt production. Two locations in Idaho are being intensively studied to meet these objectives. Information from this research will be applied to parr monitoring streams statewide to develop escapement objectives and determine success of habitat enhancement projects. This project to date has developed good information on the relationship between adult chinook salmon escapement and smolt production at low to medium seeding levels. This information for steelhead includes a fair estimate of carrying capacity. To date, we have been unable to accurately estimate egg-to-parr survival for steelhead. Future efforts will include determining the relationship between adult steelhead trout escapement and age 1 + parr production, determining environmental and habitat factors that affect smolt production, and developing project results to help the region make good management decisions for anadromous fish.

  20. Interim results from a study of the behavior of juvenile Chinook salmon at Cougar Reservoir and Dam, Oregon, March--August 2011

    Science.gov (United States)

    Beeman, John W.; Hansel, Hal C.; Hansen, Amy C.; Haner, Philip V.; Sprando, Jamie M.; Smith, Collin D.; Evans, Scott D.

    2012-01-01

    The movements and dam passage of yearling juvenile Chinook salmon implanted with acoustic transmitters and passive integrated transponder tags were studied at Cougar Reservoir and Dam, near Springfield, Oregon. A total of 411 hatchery fish and 26 wild fish were tagged and released between March 7 and May 21, 2011. A series of 16 autonomous hydrophones placed throughout the reservoir were used to determine general fish movements over the life of the acoustic transmitter, which was expected to be 91 days. Movements within the reservoir were directional, and it was common for fish to migrate repeatedly from the head of the reservoir downstream to the dam outlet and back. The dam passage rate was 11.2 percent (95-percent confidence interval 7.8–14.6 percent) for hatchery fish and 15.4 percent (95-percent confidence interval -1.0–31.8 percent) for wild fish within 91 days from release. Most fish passage occurred at night. The median time from release to dam passage was 34.5 days for hatchery fish and 34.2 days for wild fish. A system of hydrophones near the dam outlet, a temperature control tower, was used to estimate positions of fish in three dimensions to enable detailed analyses of fish behavior near the tower. Analyses of these data indicate that hourly averaged depths of fish within a distance of 74 m from the upstream face of the tower ranged from 0.6 to 9.6 meters, with a median depth of 3.6 meters for hatchery fish and 3.4 meters for wild fish. Dam discharge rates and the diurnal period affected the rates of dam passage. Rates of dam passage were similar when the dam discharge rate was less than 1,200 cubic feet per second, but increased sharply at higher discharges. The rate of dam passage at night was 4.4–7.8 times greater than during the day, depending on the distance of fish from the dam. This report is an interim summary of data collected as of August 3, 2011, for planning purposes.

  1. The influence of alewife year-class strength on prey selection and abundance of age-1 Chinook salmon in Lake Michigan

    Science.gov (United States)

    Warner, D.M.; Kiley, C.S.; Claramunt, R.M.; Clapp, D.F.

    2008-01-01

    We used growth and diet data from a fishery-independent survey of Chinook salmon Oncorhynchus tshawytscha, acoustic estimates of prey density and biomass, and statistical catch-at-age modeling to study the influence of the year-class strength of alewife Alosa pseudoharengus on the prey selection and abundance of age-1 Chinook salmon in Lake Michigan during the years 1992-1996 and 2001-2005. Alewives age 2 or younger were a large part of age-1 Chinook salmon diets but were not selectively fed upon by age-1 Chinook salmon in most years. Feeding by age-1 Chinook salmon on alewives age 2 or younger became selective as the biomass of alewives in that young age bracket increased, and age-1 Chinook salmon also fed selectively on young bloaters Coregonus hoyi when bloater density was high. Selection of older alewives decreased at high densities of alewives age 2 or younger and, in some cases, high densities of bloater. The weight and condition of age-1 Chinook salmon were not related to age-1 Chinook salmon abundance or prey abundance, but the abundance of age-1 Chinook salmon in year t was positively related to the density of age-0 alewives in year t - 1. Our results suggest that alewife year-class strength exerts a positive bottom-up influence on age-1 Chinook salmon abundance, prey switching behavior by young Chinook salmon contributing to the stability of the predator-prey relationship between Chinook salmon and alewives. ?? Copyright by the American Fisheries Society 2008.

  2. AFSC/ABL: 2009 Chinook Excluder Samples

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This project genetically analyzed 1,620 chinook salmon samples from the 2009 spring salmon excluder device test. These samples were collected over a short period of...

  3. AFSC/ABL: Chinook allozyme baseline

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Allozyme variation was used to examine population genetic structure of adult chinook salmon, Oncorhynchus tshawytscha, collected between 1988 and 1993 from 22...

  4. Chinook Abundance - Linear Features [ds181

    Data.gov (United States)

    California Department of Resources — The dataset 'ds181_Chinook_ln' is a product of the CalFish Adult Salmonid Abundance Database. Data in this shapefile are collected from stream sections or reaches...

  5. Trophic interactions and consumption rates of subyearling Chinook Salmon and nonnative juvenile American Shad in Columbia River reservoirs

    Science.gov (United States)

    Haskell, Craig A.; Beauchamp, David A.; Bollins, Stephen M

    2017-01-01

    We used a large lampara seine coupled with nonlethal gastric lavage to examine the diets and estimate consumption rates of subyearling Chinook Salmon Oncorhynchus tshawytscha during July and August 2013. During August we also examined the diet and consumption rates of juvenile American Shad Alosa sapidissima, a potential competitor of subyearling Chinook Salmon. Subyearling Chinook Salmon consumed Daphnia in July but switched to feeding on smaller juvenile American Shad in August. We captured no juvenile American Shad in July, but in August juvenile American Shad consumed cyclopoid and calanoid copepods. Stomach evacuation rates for subyearling Chinook Salmon were high during both sample periods (0.58 h−1 in July, 0.51 h−1 in August), and daily ration estimates were slightly higher than values reported in the literature for other subyearlings. By switching from planktivory to piscivory, subyearling Chinook Salmon gained greater growth opportunity. While past studies have shown that juvenile American Shad reduce zooplankton availability for Chinook Salmon subyearlings, our work indicates that they also become important prey after Daphnia abundance declines. The diet and consumption data here can be used in future bioenergetics modeling to estimate the growth of subyearling Chinook Salmon in lower Columbia River reservoirs.

  6. Grande Ronde Basin Chinook Salmon Captive Brood and Conventional Supplementation Program, 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Carmichael, Richard W. (Oregon Department of Fish and Wildlife, La Grande, OR)

    2003-03-01

    Endangered Species Permit Number 1011 (formerly Permit No. 973) authorizes ODFW to take listed spring chinook salmon juveniles from Catherine Creek (CC), Lostine River (LR) and Grande Ronde River (GR) for research and enhancement purposes. Modification 2 of this permit authorizes ODFW to take adults for spawning and the production and release of smolts for the Captive and Conventional broodstock programs. This report satisfies the requirement that an annual report be submitted. Herein we report on activities conducted and provide cursory data analyses for the Grande Ronde spring chinook salmon Captive and Conventional broodstock projects from 1 January-31 December 2000.

  7. Grande Ronde Basin Chinook Salmon Captive Brood and Conventional Supplementation Programs, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Carmichael, Richard W. (Oregon Department of Fish and Wildlife, La Grande, OR)

    2003-03-01

    Endangered Species Permit Number 1011 (formerly Permit No. 973) authorizes ODFW to take listed spring chinook salmon juveniles from Catherine Creek (CC), Lostine River (LR) and Grande Ronde River (GR) for research and enhancement purposes. Modification 2 of this permit authorizes ODFW to take adults for spawning and the production and release of smolts for the Captive and Conventional broodstock programs. This report satisfies the requirement that an annual report be submitted. Herein we report on activities conducted and provide cursory data analyses for the Grande Ronde spring chinook salmon Captive and Conventional broodstock projects from 1 January-31 December 2001.

  8. Chromium Toxicity Test for Fall Chinook Salmon (Oncorhynchus tshawytscha) Using Hanford Site Groundwater: Onsite Early Life-Stage Toxicity Evaluation

    Energy Technology Data Exchange (ETDEWEB)

    Patton, Gregory W.; Dauble, Dennis D.; Chamness, Michele A.; Abernethy, Cary S.; McKinstry, Craig A.

    2001-07-10

    The objective of this study was to evaluate site-specific effects for early life-stage (eyed eggs to free swimming juveniles) fall chinook salmon that might be exposed to hexavalent chromium from Hanford groundwater sources. Our exposure conditions included hexavalent chromium obtained from Hanford groundwater wells near the Columbia River, Columbia River water as the diluent, and locally adapted populations of fall chinook salmon. This report describes both a 96-hr pretest using rainbow trout eggs and an early life-stage test beginning with chinook salmon eggs.

  9. Grande Ronde Basin Chinook Salmon Captive Brood and Conventional Supplementation Programs, 1998 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Carmichael, Richard W. (Oregon Department of Fish and Wildlife, La Grande, OR)

    2003-03-01

    Permit Number 1011 (formerly Permit No. 973) authorized ODFW to take listed spring chinook salmon juveniles from Catherine Creek and the Lostine and Grande Ronde rivers for scientific research and enhancement purposes. Special condition 2a specified the need for an annual report prior to initiation of next years work.

  10. Grande Ronde Basin Chinook Salmon Captive Brood and Conventional Supplementation Programs, 1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Carmichael, Richard W. (Oregon Department of Fish And Wildlife, La Grande, OR)

    2003-03-01

    Permit Number 1011 (formerly Permit No. 973) authorized ODFW to take listed spring chinook salmon juveniles from Catherine Creek and the Lostine and Grande Ronde rivers for scientific research and enhancement purposes. Special condition 2a specified the need for an annual report prior to initiation of next year's work.

  11. Egg to Fry - Chinook Egg-to-Fry Survival

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Few estimates of Chinook egg-to-fry survival exist despite the fact that this is thought to be one of the life stages limiting production of many listed Chinook...

  12. Emigration of Natural and Hatchery Chinook Salmon and Steelhead Smolts from the Imnaha River, Oregon, Progress Report 2000-2002.

    Energy Technology Data Exchange (ETDEWEB)

    Cleary, Peter; Kucera, Paul; Blenden, Michael

    2003-12-01

    This report summarizes the emigration studies of the Nez Perce Tribe in the Imnaha River subbasin during the 2001 and 2002 migration years. A migration year for the Imnaha River is defined here as beginning July 31 of the previous year and ending July 30 the following year. The conclusion of the studies at the end of migration year 2002 marked the 11th year of the Nez Perce Tribe's Lower Snake River Emigration Studies. The Nez Perce Tribe has participated in the Fish Passage Center's Smolt Monitoring Program for nine of the 11 years. These studies collect and tag juvenile chinook salmon and steelhead at two locations in the fall, rkm 74 and rkm 7, and at rkm 7 during the spring. Data from captured and tagged fish provide an evaluation of hatchery production and releases strategies, post release survival of hatchery chinook salmon, abundance of natural chinook salmon, and downstream survival and arrival timing of natural and hatchery chinook salmon and steelhead. The hydrologic conditions that migrating fish encountered in 2001 were characterized as a drought and conditions in 2002 were characterized as below average. Hatchery chinook salmon had a mean fork length that was 34 mm greater in 2001 and 35 mm greater in 2002 than the mean fork length of natural chinook smolts. Hatchery steelhead smolt mean fork lengths were 39 mm greater than natural steelhead smolts in 2001 and 44 mm greater than natural steelhead smolt fork lengths in 2002. A significant difference (p < 0.05) between hatchery and natural chinook salmon and steelhead fork lengths has been documented by these emigration studies from 1997 to 2002. Hatchery chinook salmon were volitionally released in 2001 and 2002 and the 90% arrivals for 2001 and 2002 at the lower rkm 7 trap were within the range of past observations of 22 to 38 days observed in 1999 and 2000. We estimated that 93.9% of the 123,014 hatchery chinook salmon released in 2001 survived to the lower trap and 90.2% of the 303

  13. Economics of fishery failure the fall of the king-analysis of United States West Coast Chinook salmon (Oncorhyncus Tshawytscha)

    OpenAIRE

    Hoshlyk, Michael J.

    2011-01-01

    Approved for public release; distribution is unlimited. This study examines bio-economic trends within the West Coast wild salmon fishery, specifically the Chinook (King) salmon Oncorhyncus Tshawytscha species. This study will first review the historical management, policies, competing interests, and environment affecting the health of the wild Chinook that brought the fishery sector to its current status. It focuses on fisheries supply data derived from both farmed aquaculture and troll c...

  14. Foraging and growth potential of juvenile Chinook Salmon after tidal restoration of a large river delta

    Science.gov (United States)

    David, Aaron T.; Ellings, Christopher; Woo, Isa; Simenstad, Charles A.; Takekawa, John Y.; Turner, Kelley L.; Smith, Ashley L.; Takekawa, Jean E.

    2014-01-01

    We evaluated whether restoring tidal flow to previously diked estuarine wetlands also restores foraging and growth opportunities for juvenile Chinook Salmon Oncorhynchus tshawytscha. Several studies have assessed the value of restored tidal wetlands for juvenile Pacific salmon Oncorhynchus spp., but few have used integrative measures of salmon performance, such as habitat-specific growth potential, to evaluate restoration. Our study took place in the Nisqually River delta, Washington, where recent dike removals restored tidal flow to 364 ha of marsh—the largest tidal marsh restoration project in the northwestern contiguous United States. We sampled fish assemblages, water temperatures, and juvenile Chinook Salmon diet composition and consumption rates in two restored and two reference tidal channels during a 3-year period after restoration; these data were used as inputs to a bioenergetics model to compare Chinook Salmon foraging performance and growth potential between the restored and reference channels. We found that foraging performance and growth potential of juvenile Chinook Salmon were similar between restored and reference tidal channels. However, Chinook Salmon densities were significantly lower in the restored channels than in the reference channels, and growth potential was more variable in the restored channels due to their more variable and warmer (2°C) water temperatures. These results indicate that some—but not all—ecosystem attributes that are important for juvenile Pacific salmon can recover rapidly after large-scale tidal marsh restoration.

  15. Identification of the Spawning, Rearing, and Migratory Requirements of Fall Chinook Salmon in the Columbia River Basin, 1991 Annual Progress Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rondorf, Dennis W.; Miller, William H.

    1993-07-01

    This document is the 1991 annual progress report for selected studies of fall chinook salmon Oncorhynchus tshawytscha conducted by the US Fish and Wildlife Service. The decline in abundance of fall chinook salmon in the Snake River basin has become a growing concern. In April 1992, Snake River fall chinook salmon were listed as ``threatened`` under the Endangered Species Act. Effective recovery efforts for fall chinook salmon can not be developed until we increase our knowledge of the factors that are limiting the various life history stages. This study attempts to identify those physical and biological factors which influence spawning of fall chinook salmon in the free-flowing Snake River and their rearing and seaward migration through Columbia River basin reservoirs.

  16. Susceptibility of ocean- and stream-type Chinook salmon to isolates of the L, U, and M genogroups of infectious hematopoietic necrosis virus (IHNV).

    Science.gov (United States)

    Hernandez, Daniel G; Purcell, Maureen K; Friedman, Carolyn S; Kurath, Gael

    2016-08-31

    This study examined the susceptibility of Chinook salmon Oncorhynchus tshawytscha to viral strains from the L, U, and M genogroups of infectious hematopoietic necrosis virus (IHNV) present in western North America. The goal of this investigation was to establish a baseline understanding of the susceptibility of ocean- and stream-type Chinook salmon to infection and mortality caused by exposure to commonly detected strains of L, U, and M IHNV. The L IHNV strain tested here was highly infectious and virulent in both Chinook salmon populations, following patterns previously reported for Chinook salmon. Furthermore, ocean- and stream-type Chinook salmon fry at 1 g can also become subclinically infected with U and M strains of IHNV without experiencing significant mortality. The stream-type life history phenotype was generally more susceptible to infection and suffered greater mortality than the ocean-type phenotype. Between the U and M genogroup strains tested, the U group strains were generally more infectious than the M group strains in both Chinook salmon types. Substantial viral clearance occurred by 30 d post exposure, but persistent viral infection was observed with L, U, and M strains in both host populations. While mortality decreased with increased host size in stream-type Chinook salmon, infection prevalence was not lower for all strains at a greater size. These results suggest that Chinook salmon may serve as reservoirs and/or vectors of U and M genogroup IHNV.

  17. Migratory Characteristics of Spring Chinook Salmon in the Willamette River : Annual Report 1991.

    Energy Technology Data Exchange (ETDEWEB)

    Snelling, John C.

    1993-05-01

    This report documents our research to examine in detail the migration of juvenile and adult spring chinook salmon in the Willamette River. We seek to determine characteristics of seaward migration of spring chinook smolts in relation to oxygen supplementation practices at Willamette Hatchery, and to identify potential sources of adult spring chinook mortality in the Willamette River above Willamette Falls and use this information towards analysis of the study on efficiency of oxygen supplementation. The majority of juvenile spring chinook salmon released from Willamette hatchery in 1991 begin downstream movement immediately upon liberation. They travel at a rate of 1.25 to 3.5 miles per hour during the first 48 hours post-release. Considerably slower than the water velocities available to them. Juveniles feed actively during migration, primarily on aquatic insects. Na{sup +}/K{sup +} gill ATPase and cortisol are significantly reduced in juveniles reared in the third pass of the Michigan series with triple density and oxygen supplementation, suggesting that these fish were not as well developed as those reared under other treatments. Returning adult spring chinook salmon migrate upstream at an average rate of about 10 to 20 miles per day, but there is considerable between fish variation. Returning adults exhibit a high incidence of wandering in and out of the Willamette River system above and below Willamette Falls.

  18. Snake River Fall Chinook Salmon Life History Investigations, Annual Report 2008.

    Energy Technology Data Exchange (ETDEWEB)

    Tiffan, Kenneth F. [U.S. Geological Survey; Connor, William P. [U.S. Fish and Wildlife Service; Bellgraph, Brian J. [Pacific Northwest National Laboratory

    2009-09-15

    This study was initiated to provide empirical data and analyses on the dam passage timing, travel rate, survival, and life history variation of fall Chinook salmon that are produced in the Clearwater River. The area of interest for this study focuses on the lower four miles of the Clearwater River and its confluence with the Snake River because this is an area where many fish delay their seaward migration. The goal of the project is to increase our understanding of the environmental and biological factors that affect juvenile life history of fall Chinook salmon in the Clearwater River. The following summaries are provided for each of the individual chapters in this report.

  19. Analysis of Chinook Salmon in the Columbia River from an Ecosystem Perspective. Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Lichatowich, James A.; Mobrand, Lars E.

    1995-01-01

    Ecosystem Diagnosis and Treatment (EDT) methodology was applied to the analysis of chinook salmon in the mid-Columbia subbasins which flow through the steppe and steppe-shrub vegetation zones. The EDT examines historical changes in life history diversity related to changes in habitat. The emphasis on life history, habitat and historical context is consistent with and ecosystem perspective. This study is based on the working hypothesis that the decline in chinook salmon was at least in part due to a loss of biodiversity defined as the intrapopulation life history diversity. The mid Columbia subbasins included in the study are the Deschutes, John Day, Umatilla, Tucannon and Yakima.

  20. Evaluate the Restoration Potential of Snake River Fall Chinook Salmon Spawning Habitat, Status Report 2006.

    Energy Technology Data Exchange (ETDEWEB)

    Hanrahan, T.P. [Pacific Northwest National Laboratory

    2009-01-08

    The Bonneville Power Administration (BPA) Project 2003-038-00, Evaluate the restoration potential of Snake River fall Chinook salmon spawning habitat, began in FY04 (15 December 2003) and continues into FY06. This status report is intended to summarize accomplishments during FY04 and FY05. Accomplishments are summarized by Work Elements, as detailed in the Statement of Work (see BPA's project management database PISCES). This project evaluates the restoration potential of mainstem habitats for fall Chinook salmon. The studies address two research questions: 'Are there sections not currently used by spawning fall Chinook salmon within the impounded lower Snake River that possess the physical characteristics for potentially suitable fall Chinook spawning habitat?' and 'Can hydrosystem operations affecting these sections be adjusted such that the sections closely resemble the physical characteristics of current fall Chinook salmon spawning areas in similar physical settings?' Efforts are focused at two study sites: (1) the Ice Harbor Dam tailrace downstream to the Columbia River confluence, and (2) the Lower Granite Dam tailrace. Our previous studies indicated that these two areas have the highest potential for restoring Snake River fall Chinook salmon spawning habitat. The study sites will be evaluated under existing structural configurations at the dams (i.e., without partial removal of a dam structure), and alternative operational scenarios (e.g., varying forebay/tailwater elevations). The areas studied represent tailwater habitat (i.e., riverine segments extending from a dam downstream to the backwater influence from the next dam downstream). We are using a reference site, indicative of current fall Chinook salmon spawning areas in tailwater habitat, against which to compare the physical characteristics of each study site. The reference site for tailwater habitats is the section extending downstream from the Wanapum Dam tailrace on the

  1. Chinook salmon Genetic Stock Identification data - Genetic Stock Identification of Washington Chinook salmon

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This project evaluates data from coded wire tagging with that from parental based tagging to identify stock of origin for Chinook salmon landed in Washington state...

  2. Monitoring the Migrations of Wild Snake River Spring/Summer Chinook Salmon Smolts, 1994 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Achord, Stephen; Matthews, Gene M.; Kamikawa, Daniel J.

    1995-09-01

    The goals of this study are to (1) characterize the outmigration timing of different wild stocks of spring/summer chinook salmon smolts at dams on the Snake and Columbia Rivers, (2) determine if consistent patterns are apparent, and (3) determine what environmental factors influence outmigration timing. The authors PIT tagged wild spring/summer chinook salmon parr in the Snake River Basin in 1993, and subsequently monitored these fish during their smolt migration through Lower Granite, Little Goose, Lower Monumental, and McNary Dams during spring, summer, and fall 1994. This report details their findings.

  3. The Regional Salmon Outmigration Study--survival and migration routing of juvenile Chinook salmon in the Sacramento-San Joaquin River Delta during the winter of 2008-09

    Science.gov (United States)

    Romine, Jason G.; Perry, Russell W.; Brewer, Scott J.; Adams, Noah S.; Liedtke, Theresa L.; Blake, Aaron R.; Burau, Jon R.

    2013-01-01

    Juvenile Chinook salmon (Oncorhynchus tshawytscha) emigrating from natal tributaries of the Sacramento River may use a number of migration routes to navigate the Sacramento-San Joaquin River Delta (hereafter called “the Delta”), each of which may influence their probability of surviving. We applied a mark-recapture model to data from acoustically tagged juvenile late fall-run Chinook salmon that migrated through the Delta during the winter of 2008–09 to estimate route entrainment, survival, and migration times through the Delta. A tag-life study was conducted to determine the potential for premature tag failure. Tag failure began after 12 days and continued until the 45th day. Travel times of tagged fish exceeded minimum tag-failure times, indicating that survival estimates obtained from this study were negatively biased due to tag failure prior to fish exiting the Delta. Survival estimates were not adjusted and represent the joint probability of tag survival and fish survival. However, relative comparisons of survival among Chinook salmon choosing different routes appeared to be robust to tag failure, and migration-routing parameters were unaffected by tag failure. Migration-routing patterns were consistent among release groups. The Sacramento River was the primary migration route for all release groups except one. The percentage of fish entering the Sacramento River ranged from 33 to 55 percent. Sutter and Steamboat Sloughs were the secondary migration route for 9 of the 10 releases. The percentage of fish migrating through this route ranged from 10 to 35 percent. Entrainment into the interior Delta ranged from 15 to 33 percent. The Delta Cross Channel gates were open for 7 of the 10 releases. Entrainment into the interior Delta through the cross channel ranged from 1 to 27 percent. We estimated route-specific survival for 10 release groups that were released between November 14, 2008, and January 19, 2009. Population-level survival through the Delta

  4. A Virus-like disease of chinook salmon

    Science.gov (United States)

    Ross, A.J.; Pelnar, J.; Rucker, R.R.

    1960-01-01

    Consideration is given to a recurring disease of early feeding chinook salmon fingerlings at the Coleman, California, Federal Fish Cultural Station. The infection becomes manifest in the early spring months at low water temperatures and abates as the water temperature rises. Bacteriological studies have failed to yield the presence of a disease agent, either by cultural or staining procedures. The disease has been successfully transmitted from infected fish to healthy fish by the injection of bacteria-free filtrates prepared from diseased fish tissue. The causative agent is therefore believed to be a virus-like entity.

  5. Chinook Salmon Adult Abundance Monitoring; Hydroacoustic Assessment of Chinook Salmon Escapement to the Secesh River, Idaho, 2002-2004 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, R.; McKinstry, C.; Mueller, R.

    2004-01-01

    Accurate determination of adult salmon spawner abundance is key to the assessment of recovery actions for wild Snake River spring/summer Chinook salmon (Onchorynchus tshawytscha), a species listed as 'threatened' under the Endangered Species Act (ESA). As part of the Bonneville Power Administration Fish and Wildlife Program, the Nez Perce Tribe operates an experimental project in the South Fork of the Salmon River subbasin. The project has involved noninvasive monitoring of Chinook salmon escapement on the Secesh River between 1997 and 2000 and on Lake Creek since 1998. The overall goal of this project is to accurately estimate adult Chinook salmon spawning escapement numbers to the Secesh River and Lake Creek. Using time-lapse underwater video technology in conjunction with their fish counting stations, Nez Perce researchers have successfully collected information on adult Chinook salmon spawner abundance, run timing, and fish-per-redd numbers on Lake Creek since 1998. However, the larger stream environment in the Secesh River prevented successful implementation of the underwater video technique to enumerate adult Chinook salmon abundance. High stream discharge and debris loads in the Secesh caused failure of the temporary fish counting station, preventing coverage of the early migrating portion of the spawning run. Accurate adult abundance information could not be obtained on the Secesh with the underwater video method. Consequently, the Nez Perce Tribe now is evaluating advanced technologies and methodologies for measuring adult Chinook salmon abundance in the Secesh River. In 2003, the use of an acoustic camera for assessing spawner escapement was examined. Pacific Northwest National Laboratory, in a collaborative arrangement with the Nez Perce Tribe, provided the technical expertise to implement the acoustic camera component of the counting station on the Secesh River. This report documents the first year of a proposed three-year study to determine

  6. Monitoring the Migrations of Wild Snake River Spring/Summer Chinook Salmon Smolts, 1993 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Achord, Stephen; Kamikawa, Daniel J.; Sandford, Benjamin P. (Northwest and Alaska Fisheries Science Center, Coastal Zone and Estuarine Studies Division, Seattle, WA)

    1995-01-01

    The goals of this study are to (1) characterize the outmigration timing of different wild stocks of spring/summer chinook salmon smolts at dams on the Snake and Columbia Rivers, (2) determine if consistent patterns are apparent, and (3) determine what environmental factors influence outmigration timing.

  7. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin, Volume V; Analysis of In-River Growth for PIT-Tagged Spring Chinook Smolt, 1999 Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Perez-Comas, Jose A.; Skalski, John R. (University of Washington, School Fisheries, Seattle, WA)

    1999-07-01

    The length of tagged fish is often measured at the release site and at least one downstream detection site for many PIT-tagged releases, enabling the study of growth of a particular salmonid species, run, year-class and rearing type, during their downstream migration. The purpose of this report is to suggest an approach to analyze the in-river growth of PIT-tagged salmonid yearlings. Since the age of the tagged fish is unknown, its growth must be assessed by means of the relationships between the release and recovery sizes of tagged fish, and between those and the time elapsed between release and recovery. Analyses of this type require adequate samples. A simple three-step protocol for selecting adequate data for unbiased samples is provided. Three methods: Walford's lines, Kolmogorov-Smirnov tests and one-tail paired t-tests, are suggested as analytical tools and applied to detect in-river growth from selected samples of PIT-tagged spring chinook yearlings. Finally, the between-sample comparison of growth rates by means of a simple linear model is discussed.

  8. Smolt Quality Assessment of Spring Chinook Salmon : Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Zaugg, Waldo S.

    1991-04-01

    The physiological development and physiological condition of spring chinook salmon are being studied at several hatcheries in the Columbia River Basin. The purpose of the study is to determine whether any or several smolt indices can be related to adult recovery and be used to improve hatchery effectiveness. The tests conducted in 1989 on juvenile chinook salmon at Dworshak, Leavenworth, and Warm Springs National Fish Hatcheries, and the Oregon State Willamette Hatchery assessed saltwater tolerance, gill ATPase, cortisol, insulin, thyroid hormones, secondary stress, fish morphology, metabolic energy stores, immune response, blood cell numbers, and plasma ion concentrations. The study showed that smolt development may have occurred before the fish were released from the Willamette Hatchery, but not from the Dworshak, Leavenworth, or Warm Springs Hatcheries. These results will be compared to adult recovery data when they become available, to determine which smolt quality indices may be used to predict adult recovery. The relative rankings of smolt quality at the different hatcheries do not necessarily reflect the competency of the hatchery managers and staff, who have shown a high degree of professionalism and expertise in fish rearing. We believe that the differences in smolt quality are due to the interaction of genetic and environmental factors. One aim of this research is to identify factors that influence smolt development and that may be controlled through fish husbandry to regulate smolt development. 35 refs., 27 figs., 5 tabs.

  9. Spawning Success of Hatchery Spring Chinook Salmon Outplanted as Adults in the Clearwater River Basin, Idaho, 2001.

    Energy Technology Data Exchange (ETDEWEB)

    Cramer, Steven P.; Ackerman, Nichlaus; Witty, Kenneth L.

    2002-04-16

    The study described in this report evaluated spawning distribution, overlap with naturally-arriving spawners, and pre-spawning mortality of spring chinook salmon, Oncorhynchus tshawytscha, outplanted as adults in the Clearwater River Subbasin in 2001. Returns of spring chinook salmon to Snake River Basin hatcheries and acclimation facilities in 2001 exceeded needs for hatchery production goals in Idaho. Consequently, management agencies including the U.S. Fish and Wildlife Service (FWS), Idaho Department of Fish and Game (IDFG) and Nez Perce Tribe (NPT) agreed to outplant chinook salmon adults as an adaptive management strategy for using hatchery adults. Adult outplants were made in streams or stream sections that have been typically underseeded with spawners. This strategy anticipated that outplanted hatchery chinook salmon would spawn successfully near the areas where they were planted, and would increase natural production. Outplanting of adult spring chinook salmon from hatcheries is likely to be proposed in years when run sizes are similar to those of the 2001 run. Careful monitoring of results from this year's outplanting can be used to guide decisions and methods for future adult outplanting. Numbers of spring chinook salmon outplanted was based on hatchery run size, hatchery needs, and available spawning habitat. Hatcheries involved in outplanting in the Clearwater Basin included Dworshak National Fish Hatchery, Kooskia National Fish Hatchery, Clearwater Anadromous Fish Hatchery, and Rapid River Fish Hatchery. The NPT, IDFG, FWS, and the National Marine Fisheries Service (NMFS) agreed upon outplant locations and a range of numbers of spring chinook salmon to be outplanted (Table 1). Outplanting occurred mainly in the Selway River Subbasin, but additional outplants were made in tributaries to the South Fork Clearwater River and the Lochsa River (Table 1). Actual outplanting activities were carried out primarily by the NPT with supplemental outplanting

  10. Water Temperature, Invertebrate Drift, and the Scope for Growth for Juvenile Spring Chinook Salmon.

    Science.gov (United States)

    Lovtang, J. C.; Li, H. W.

    2005-05-01

    We present a bioenergetic assessment of habitat quality based on the concept of the scope for growth for juvenile Chinook salmon. Growth of juvenile salmonids during the freshwater phase of their life history depends on a balance between two main factors: energy intake and metabolic costs. The metabolic demands of temperature and the availability of food play integral roles in determining the scope for growth of juvenile salmonids in stream systems. We investigated differences in size of juvenile spring Chinook salmon in relation to water temperature and invertebrate drift density in six unique study reaches in the Metolius River Basin, a tributary of the Deschutes River in Central Oregon. This project was initiated to determine the relative quality and potential productivity of habitat in the Metolius Basin prior to the reintroduction of spring Chinook salmon, which were extirpated from the middle Deschutes basin in the early 1970's due to the construction of a hydroelectric dam. Variations in the growth of juvenile Chinook salmon can be described using a multiple regression model of water temperature and invertebrate drift density. We also discuss the relationships between our bioenergetic model, variations of the ideal free distribution model, and physiological growth models.

  11. Assimilation efficiency of PBDE congeners in Chinook salmon.

    Science.gov (United States)

    Dietrich, Joseph P; Strickland, Stacy A; Hutchinson, Greg P; Van Gaest, Ahna L; Krupkin, Alex B; Ylitalo, Gina M; Arkoosh, Mary R

    2015-03-17

    Polybrominated diphenyl ether (PBDE) flame retardants are environmental contaminants that can accumulate in biota. PBDE accumulation in an organism depends on exposure, assimilation efficiency, and elimination/metabolism. Net assimilation efficiency represents the fraction of the contaminant that is retained in the organism after exposure. In the present study, congener-specific estimates of net PBDE assimilation efficiencies were calculated from dietary exposures of juvenile Chinook salmon. The fish were exposed to one to eight PBDE congeners up to 1500 ng total PBDEs/g food. Mean assimilation efficiencies varied from 0.32 to 0.50 for BDE congeners 28, 47, 99, 100, 153, and 154. The assimilation efficiency of BDE49 was significantly greater than 100%, suggesting biotransformation from higher brominated congeners. Whole body concentrations of BDE49 significantly increased with both exposure to increasing concentrations of BDE99 and decreasing fish lipid levels, implying lipid-influenced debromination of BDE99 to BDE49. Excluding BDE49, PBDE assimilation efficiency was not significantly related to the numbers of congeners in the diets, or congener hydrophobicity, but was greater in foods with higher lipid levels. Estimates of PBDE assimilation efficiency can be used in bioaccumulation models to assess threats from PBDE exposure to Chinook salmon health and recovery efforts, as well as to their predators.

  12. Ontogeny of the stress response in chinook salmon, Oncorhynchus tshawytscha

    Science.gov (United States)

    Feist, G.; Schreck, C.B.

    2001-01-01

    Whole body concentrations of cortisol were determined via radioimmunoassay in chinook salmon, Onchorynchus tshawytscha, during early development in both stressed and non-stressed fish to determine when the corticosteroidogenic stress response first appeared. Progeny from both pooled and individual females were examined to determine if differences existed in offspring from different females. Levels of cortisol were low in eyed eggs, increased at hatch, decreased 2 weeks later and then remained constant thereafter. Differences in cortisol between stressed and control fish were found 1 week after hatch and persisted for the remainder of the study. The magnitude of the stress response, or relative amount of cortisol produced, generally increased from the time when it was first detected, but a decrease in the ability to elicit cortisol was seen 4 weeks after hatching. Cortisol content of separate progeny from two individual females showed a similar pattern to that seen in pooled eggs. Our results indicate that chinook salmon are capable of producing cortisol following a stressful event approximately 1 week after the time of hatching. The decrease in endogenous cortisol content seen 2 weeks after hatching, and the decrease in the magnitude of the stress response seen 4 weeks after hatching may be comparable to developmental events documented in mammals where corticosteroid synthesis is inhibited to neutralize possible detrimental effects of these hormones during critical periods of development.

  13. Brood Year 2004: Johnson Creek Chinook Salmon Supplementation Report, June 2004 through March 2006.

    Energy Technology Data Exchange (ETDEWEB)

    Gebhards, John S.; Hill, Robert; Daniel, Mitch [Nez Perce Tribe

    2009-02-19

    The Nez Perce Tribe, through funding provided by the Bonneville Power Administration, has implemented a small scale chinook salmon supplementation program on Johnson Creek, a tributary in the South Fork of the Salmon River, Idaho. The Johnson Creek Artificial Propagation Enhancement project was established to enhance the number of threatened Snake River spring/summer chinook salmon (Oncorhynchus tshawytscha) returning to Johnson Creek to spawn through artificial propagation. This was the sixth season of adult chinook broodstock collection in Johnson Creek following collections in 1998, 2000, 2001, 2002, and 2003. Weir installation was completed on June 21, 2004 with the first chinook captured on June 22, 2004 and the last fish captured on September 6, 2004. The weir was removed on September 18, 2004. A total of 338 adult chinook, including jacks, were captured during the season. Of these, 211 were of natural origin, 111 were hatchery origin Johnson Creek supplementation fish, and 16 were adipose fin clipped fish from other hatchery operations and therefore strays into Johnson Creek. Over the course of the run, 57 natural origin Johnson Creek adult chinook were retained for broodstock, transported to the South Fork Salmon River adult holding and spawning facility and held until spawned. The remaining natural origin Johnson Creek fish along with all the Johnson Creek supplementation fish were released upstream of the weir to spawn naturally. Twenty-seven Johnson Creek females were artificially spawned with 25 Johnson Creek males. Four females were diagnosed with high bacterial kidney disease levels resulting in their eggs being culled. The 27 females produced 116,598 green eggs, 16,531 green eggs were culled, with an average eye-up rate of 90.6% resulting in 90,647 eyed eggs. Juvenile fish were reared indoors at the McCall Fish Hatchery until November 2005 and then transferred to the outdoor rearing facilities during the Visual Implant Elastomer tagging operation

  14. Characterization of estuary use by Nisqually Hatchery Chinook based on Otolith analysis

    Science.gov (United States)

    Lind-Null, Angie M.; Larsen, Kim A.; Reisenbichler, Reg

    2008-01-01

    INTRODUCTION The Nisqually Fall Chinook population is one of 27 stocks in the Puget Sound evolutionarily significant unit listed as threatened under the federal Endangered Species Act (ESA). Preservation and extensive restoration of the Nisqually delta ecosystem are planned to assist in recovery of the stock. A pre-restoration baseline including life history types, estuary residence time, growth rates, and habitat use are needed to evaluate the potential response of hatchery and wild Chinook salmon to restoration. Otolith analysis has been selected as a means to examine Chinook salmon life history, growth, and residence in the Nisqually estuary. Over time, the information from the otolith analyses will be used to: 1) determine if estuary restoration actions cause changes to the population structure (i.e. frequency of the different life history trajectories) for Nisqually River Chinook, 2) compare pre- and post- restoration residence times and growth rates, 3) suggest whether estuary restoration yields substantial benefits for Chinook salmon through (1) and (2), and 4) compare differences in habitat use between hatchery and wild Chinook to further protect ESA listed stock. Otoliths are calcium carbonate structures in the inner ear that grow in proportion to the overall growth of the fish. Daily growth increments can be measured so date and fish size at various habitat transitions can be back-calculated. Careful analysis of otolith microstructure can be used to determine the number of days that a fish resided in the estuary as a juvenile (increment counts), size at entrance to the estuary, size at egress, and the amount that the fish grew while in the estuary. Juvenile hatchery Chinook salmon are generally released as smolts that move quickly through the delta with much shorter residence times than for many wild fish and are not dependent on the delta as nursery habitat (Myers and Horton 1982; Mace 1983; Levings et al. 1986). The purpose of this study is to use and

  15. Pre-Restoration Habitat Use by Chinook Salmon in the Nisqually Estuary Using Otolith Analysis

    Science.gov (United States)

    Lind-Null, Angela; Larsen, Kimberly; Reisenbichler, Reginald

    2007-01-01

    purpose of this study is to evaluate and use analysis of otolith microstructure as a tool for characterizing the importance of the estuary to Chinook salmon in the Nisqually River before and after restoration efforts at the Nisqually National Wildlife Refuge (NNWR). This tool is used to quantify changes in habitat use and help assess restoration benefits to the federally threatened Nisqually River Chinook salmon population. Analysis of otolith microstructure typically is superior to the alternative of traditional mark-recapture methods. The latter are extremely expensive or inadequate in estuary habitats, typically are biased and substantially underestimate use, and do not directly reveal the importance or contribution to adult recruitment (i.e., they do not account for differential survival afterward in Puget Sound or the ocean). Analysis of otolith microstructure for these purposes, while new, is proving highly successful in a similar study that USGS and partners are conducting in the Skagit River estuary system located in northern Puget Sound. This work has been based on research by Neilson et al. (1985). We expect to use the Skagit River data as a reference for the before/after restoration comparison in the Nisqually River.

  16. Effects of hyporheic exchange flows on egg pocket water temperature in Snake River fall Chinook salmon spawning areas

    Energy Technology Data Exchange (ETDEWEB)

    Hanrahan, T. P. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Geist, D. R. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Arntzen, E. V. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Abernethy, C. S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2004-09-01

    The development of the Snake River hydroelectric system has affected fall Chinook salmon smolts by shifting their migration timing to a period (mid- to late-summer) when downstream reservoir conditions are unfavorable for survival. Subsequent to the Snake River Chinook salmon fall-run Evolutionary Significant Unit being listed as Threatened under the Endangered Species Act, recovery planning has included changes in hydrosystem operations (e.g., summer flow augmentation) to improve water temperature and flow conditions during the juvenile Chinook salmon summer migration period. In light of the limited water supplies from the Dworshak reservoir for summer flow augmentation, and the associated uncertainties regarding benefits to migrating fall Chinook salmon smolts, additional approaches for improved smolt survival need to be evaluated. This report describes research conducted by the Pacific Northwest National Laboratory (PNNL) that evaluated relationships among river discharge, hyporheic zone characteristics, and egg pocket water temperature in Snake River fall Chinook salmon spawning areas. This was a pilot-scale study to evaluate these relationships under existing operations of Hells Canyon Dam (i.e., without any prescribed manipulations of river discharge) during the 2002–2003 water year.

  17. Spatial variability of Chinook salmon spawning distribution and habitat preferences

    Science.gov (United States)

    Cram, Jeremy M.; Torgersen, Christian; Klett, Ryan S.; Pess, George R.; May, Darran; Pearsons, Todd N.; Dittman, Andrew H.

    2017-01-01

    We investigated physical habitat conditions associated with the spawning sites of Chinook Salmon Oncorhynchus tshawytscha and the interannual consistency of spawning distribution across multiple spatial scales using a combination of spatially continuous and discrete sampling methods. We conducted a census of aquatic habitat in 76 km of the upper main-stem Yakima River in Washington and evaluated spawning site distribution using redd survey data from 2004 to 2008. Interannual reoccupation of spawning areas was high, ranging from an average Pearson’s correlation of 0.62 to 0.98 in channel subunits and 10-km reaches, respectively. Annual variance in the interannual correlation of spawning distribution was highest in channel units and subunits, but it was low at reach scales. In 13 of 15 models developed for individual years (2004–2008) and reach lengths (800 m, 3 km, 6 km), stream power and depth were the primary predictors of redd abundance. Multiple channels and overhead cover were patchy but were important secondary and tertiary predictors of reach-scale spawning site selection. Within channel units and subunits, pool tails and thermal variability, which may be associated with hyporheic exchange, were important predictors of spawning. We identified spawning habitat preferences within reaches and channel units that are relevant for salmonid habitat restoration planning. We also identified a threshold (i.e., 2-km reaches) beyond which interannual spawning distribution was markedly consistent, which may be informative for prioritizing habitat restoration or conservation. Management actions may be improved through enhanced understanding of spawning habitat preferences and the consistency with which Chinook Salmon reoccupy spawning areas at different spatial scales.

  18. Abundance, stock origin, and length of marked and unmarked juvenile Chinook salmon in the surface waters of greater Puget Sound

    Science.gov (United States)

    Rice, C.A.; Greene, C.M.; Moran, P.; Teel, D.J.; Kuligowski, D.R.; Reisenbichler, R.R.; Beamer, E.M.; Karr, J.R.; Fresh, K.L.

    2011-01-01

    This study focuses on the use by juvenile Chinook salmon Oncorhynchus tshawytscha of the rarely studied neritic environment (surface waters overlaying the sublittoral zone) in greater Puget Sound. Juvenile Chinook salmon inhabit the sound from their late estuarine residence and early marine transition to their first year at sea. We measured the density, origin, and size of marked (known hatchery) and unmarked (majority naturally spawned) juveniles by means of monthly surface trawls at six river mouth estuaries in Puget Sound and the areas in between. Juvenile Chinook salmon were present in all months sampled (April-November). Unmarked fish in the northern portion of the study area showed broader seasonal distributions of density than did either marked fish in all areas or unmarked fish in the central and southern portions of the sound. Despite these temporal differences, the densities of marked fish appeared to drive most of the total density estimates across space and time. Genetic analysis and coded wire tag data provided us with documented individuals from at least 16 source populations and indicated that movement patterns and apparent residence time were, in part, a function of natal location and time passed since the release of these fish from hatcheries. Unmarked fish tended to be smaller than marked fish and had broader length frequency distributions. The lengths of unmarked fish were negatively related to the density of both marked and unmarked Chinook salmon, but those of marked fish were not. These results indicate more extensive use of estuarine environments by wild than by hatchery juvenile Chinook salmon as well as differential use (e.g., rearing and migration) of various geographic regions of greater Puget Sound by juvenile Chinook salmon in general. In addition, the results for hatchery-generated timing, density, and length differences have implications for the biological interactions between hatchery and wild fish throughout Puget Sound. ?? American

  19. Snake River Fall Chinook Salmon Brood-Stock Program, 1984 Annual Report of Research.

    Energy Technology Data Exchange (ETDEWEB)

    Harrell, Lee W.

    1985-02-01

    The objective is the enhancement of upriver stocks through research and development of an eggbank source. Viable gametes, produced from fish held to maturity in sea pens, will be made available for restoration purposes on the Snake River. Seawater entry trials with 0+-age and 1+-age fish have shown that 0+-age Snake River fall chinook salmon are not amenable to seawater entry and will either die or require up to 6 months to fully adapt to seawater. However, 1+-age smolts experience little problem at seawater entry; it is therefore suggested that Snake River fall chinook salmon be released as 1+ smolting fish in hatchery situations. Important marine mortalities occurring from osmoregulatory dysfunction, Bacterial Kidney Disease, and precocity at various life stages have been documented. Also, a previously unreported marine fungal pathogen has been identified. Mortality from this pathogen occurs from 3-years of age to maturity and can exceed 0.5% per day (resulting in losses to 90+%). At the end of December 1984, Snake River fall chinook salmon from 1980 (n = 67), 1981 (n = 876), 1982 (n = 4809), and 1983 (n = 7100) broods were under production. Because of the extensive mortality due to the marine fungal pathogen, only seven spawners were obtained from the 1980 stock in fall 1984. The 1980-brood spawners produced only minimal eggs and these will be used to investigate possible vertical transmission of the fungal pathogen. 4 figs.

  20. Concentrations of boron, molybdenum, and selenium in chinook salmon

    Science.gov (United States)

    Hamilton, Steven J.; Wiedmeyer, Raymond H.

    1990-01-01

    The concentrations of boron, molybdenum, and selenium in young chinook salmon Oncorhynchus tshawytscha were determined in three partial life cycle chronic toxicity studies. In each study, fish were exposed to a mixture of boron, molybdenum, selenate, and selenite in the proportions found in subsurface agricultural drainage water in the basin of the San Joaquin Valley, California. Tests were conducted in well water and in site-specific fresh and brackish waters. No boron or molybdenum was detected in fish exposed to concentrations as high as 6,046 μg boron/L and 193 μg molybdenum/L for 90 d in well water or fresh water; however, whole-body concentrations of selenium increased with increasing exposure concentrations in well water and fresh water, but not in brackish water. Concentrations of selenium in chinook salmon were strongly correlated with reduced survival and growth of fish in well water and with reduced survival in a 15-d seawater challenge test of fish from fresh water. Concentrations of selenium in fish seemed to reach a steady state after 60 d of exposure in well water or fresh water. Fish in brackish water had only background concentrations of selenium after 60 d of exposure, and no effects on survival and growth in brackish water or on survival in a 10-d seawater challenge test were exhibited. This lack of effect in brackish water was attributed to initiation of the study with advanced fry, which were apparently better able to metabolize the trace element mixture than were the younger fish used in studies with well water and fresh water. In all three experimental waters, concentration factors (whole-body concentration/waterborne concentration) for selenium decreased with increasing exposure concentrations, suggesting decreased uptake or increased excretion, or both, of selenium at the higher concentrations.

  1. Evaluation of Juvenile Fall Chinook Salmon Stranding on the Hanford Reach of the Columbia River, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Nugent, John; Nugent, Michael; Brock, Wendy (Washington Department of Fish and Wildlife, Olympia, WA)

    2002-05-29

    The Washington Department of Fish and Wildlife (WDFW) has been contracted through the Bonneville Power Administration (BPA) and the Grant County Public Utility District (GCPUD) to perform an evaluation of juvenile fall chinook salmon (Oncorhynchus tshawytscha) stranding on the Hanford Reach of the Columbia River. The evaluation, in the fifth year of a multi-year study, has been developed to assess the impacts of water fluctuations from Priest Rapids Dam on rearing juvenile fall chinook salmon, other fishes, and benthic macroinvertebrates of the Hanford Reach. This document provides the results of the 2001 field season.

  2. Evaluation of Juvenile Fall Chinook Salmon Stranding on the Hanford Reach of the Columbia River, 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Nugent, John; Nugent, Michael; Brock, Wendy (Washington Department of Fish and Wildlife, Olympia, WA)

    2002-05-29

    The Washington Department of Fish and Wildlife (WDFW) has been contracted through the Bonneville Power Administration (BPA) and the Grant County Public Utility District (GCPUD) to perform an evaluation of juvenile fall chinook salmon (Oncorhynchus tshawytscha) stranding on the Hanford Reach. The evaluation, in the fourth year of a multi-year study, has been developed to assess the impacts of water fluctuations from Priest Rapids Dam on rearing juvenile fall chinook salmon, other fishes, and benthic macroinvertebrates of the Hanford Reach. This document provides the results of the 2000 field season.

  3. Evaluation of Juvenile Fall Chinook Salmon Stranding on the Hanford Reach of the Columbia River, 1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Nugent, John

    2002-01-24

    The Washington Department of Fish and Wildlife (WDFW) has been contracted through the Bonneville Power Administration (BPA) and the Grant County Public Utility District (GCPUD) to perform an evaluation of juvenile fall chinook salmon (Oncorhynchus tshawytscha) stranding on the Hanford Reach. The evaluation, in the third year of a multi-year study, has been developed to assess the impacts of water fluctuations from Priest Rapids Dam on rearing juvenile fall chinook salmon, other fishes, and benthic macroinvertebrates of the Hanford Reach. This document provides the results of the 1999 field season.

  4. Evaluation of Juvenile Fall Chinook Salmon Stranding on the Hanford Reach in the Columbia River, 1998 Interim Report.

    Energy Technology Data Exchange (ETDEWEB)

    Nugent, John; Newsome, Todd; Nugent, Michael (Washington Department of Fish and Wildlife, Olympia, WA)

    2001-07-27

    The Washington Department of Fish and Wildlife (WDFW) has been contracted through the Bonneville Power Administration (BPA) and the Grant County Public Utility District (GCPUD) to perform an evaluation of juvenile fall chinook salmon (Oncorhynchus tshawytscha) stranding on the Hanford Reach. The evaluation, in the second year of a multi-year study, has been developed to assess the impacts of water fluctuations from Priest Rapids Dam on rearing juvenile fall chinook salmon, other fish species, and benthic macroinvertebrates of the Hanford Reach. This document provides the results of the 1998 field season.

  5. Pen rearing and Imprinting of Fall Chinook Salmon, 1994 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Beeman, John W.; Novotny, Jerry F.

    1994-06-01

    Results of rearing upriver bright fall chinook salmon juveniles in net pens and a barrier net enclosure in two backwater areas and a pond along the Columbia River were compared with traditional hatchery methods. Growth, smoltification, and general condition of pen-reared fish receiving supplemental feeding were better than those of fish reared using traditional methods. Juvenile fish receiving no supplemental feeding were generally in poor condition resulting in a net loss of production. Rearing costs using pens were generally lower than in the hatchery. However, low adult returns resulted in greater cost per adult recovery than fish reared and released using traditional methods. Much of the differences in recovery rates may have been due to differences in rearing locations, as study sites were as much as 128 mi upstream from the hatcheries and study fish may have incurred higher mortality associated with downstream migration than control fish. Fish reared using these methods could be a cost-effective method of enhancing salmon production in the Columbia River Basin.

  6. Compliance Monitoring of Subyearling Chinook Salmon Smolt Survival and Passage at Bonneville Dam, Summer 2012

    Energy Technology Data Exchange (ETDEWEB)

    Skalski, J. R.; Townsend, Richard L.; Seaburg, Adam; Ploskey, Gene R.; Weiland, Mark A.; Hughes, James S.; Woodley, Christa M.; Deng, Zhiqun; Carlson, Thomas J.

    2013-05-01

    The purpose of this compliance study was to estimate dam passage survival of subyearling Chinook salmon at Bonneville Dam during summer 2012, as required by the 2008 Federal Columbia River Power System Biological Opinion. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailrace 1 km below the dam, as well as forebay residence time, tailrace egress, and spill passage efficiency, as required in the 2008 Columbia Basin Fish Accords.

  7. Compliance Monitoring of Juvenile Subyearling Chinook Salmon Survival and Passage at The Dalles Dam, Summer 2010

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, Gary E.; Carlson, Thomas J.; Skalski, John R.

    2010-12-21

    The purpose of this compliance study was to estimate dam passage survival of subyearling Chinook salmon smolts at The Dalles Dam during summer 2010. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.93 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailrace 2 km below the dam The forebay-to-tailrace survival estimate satisfies the “BRZ-to-BRZ” survival estimate called for in the Fish Accords. , as well as the forebay residence time, tailrace egress time, and spill passage efficiency, as required in the Columbia Basin Fish Accords. The estimate of dam survival for subyearling Chinook salmon at The Dalles in 2010 was 0.9404 with an associated standard error of 0.0091.

  8. Summer Chinook Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for SUMMER CHINOOK contained in the StreamNet database. This feature class was created based on linear...

  9. AFSC/ABL: 2007-2013 Chinook Salmon Bycatch Sample

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A genetic analyses of samples from the Chinook salmon (Oncorhynchus tshawytscha) bycatch from the 2007-2013 Bering Sea-Aleutian Island and Gulf of Alaska trawl...

  10. Spring Chinook Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for SPRING CHINOOK contained in the StreamNet database. This feature class was created based on linear...

  11. Fall Chinook Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for FALL CHINOOK contained in the StreamNet database. This feature class was created based on linear event...

  12. AFSC/ABL: Movements of Yukon River Chinook salmon

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upriver movements were determined for Chinook salmon Oncorhynchus tshawytscha returning to the Yukon River, a large, relatively pristine river basin. A total of...

  13. Chinook Bycatch - Contemporary Salmon Genetic Stock Composition Estimates

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of this project is to measure and monitor impacts on ESA-listed populations and to estimate overall Chinook salmon stock composition in bycatch...

  14. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dalles Dam, Spring 2011

    Energy Technology Data Exchange (ETDEWEB)

    Skalski, John R.; Townsend, Richard L.; Seaburg, Adam; Johnson, Gary E.; Ploskey, Gene R.; Carlson, Thomas J.

    2012-06-12

    The study estimated dam passage survival at The Dalles Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and provided additional performance measures as stipulated in the Columbia Basin Fish Accords. This summary report focuses on spring run stocks, yearling Chinook salmon and steelhead.

  15. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dales Dam, Spring 2011

    Energy Technology Data Exchange (ETDEWEB)

    Skalski, John R.; Townsend, Richard L.; Seaburg, Adam; Johnson, Gary E.; Ploskey, Gene R.; Carlson, Thomas J.

    2012-02-01

    The study estimated dam passage survival at The Dalles Dam as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp) and provided additional performance measures as stipulated in the Columbia Basin Fish Accords. This summary report focuses on spring run stocks, yearling Chinook salmon and steelhead.

  16. Wenatchee Chinook Parentage - Evaluate the reproductive success of hatchery and wild Chinook salmon in the Wenatchee River

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — We are using genetic parentage analysis to measure the relative fitness of hatchery and wild spring run Chinook salmon that spawn in the Wenatchee River. In addition...

  17. Pathological and immunological responses associated with differential survival of Chinook salmon following Renibacterium salmoninarum challenge

    Science.gov (United States)

    Purcell, Maureen K.; Elliott, Diane G.; Metzger, C. David; Wargo, Andrew; Park, K. Linda

    2010-01-01

    Chinook salmon Oncorhynchus tshawytscha are highly susceptible to Renibacterium salmoninarum, the causative agent of bacterial kidney disease (BKD). Previously we demonstrated that introduced Chinook salmon from Lake Michigan, Wisconsin (WI), USA, have higher survival following R. salmoninarum challenge relative to the progenitor stock from Green River, Washington, USA. In the present study, we investigated the pathological and immunological responses that are associated with differential survival in the 2 Chinook salmon stocks following intra-peritoneal R. salmoninarum challenge of 2 different cohort years (2003 and 2005). Histological evaluation revealed delayed appearance of severe granulomatous lesions in the kidney and lower overall prevalence of membranous glomerulopathy in the higher surviving WI stock. The higher survival WI stock had a lower bacterial load at 28 d post-infection, as measured by reverse-transcriptase quantitative polymerase chain reaction (RT-qPCR). However, at all other time points, bacterial load levels were similar despite higher mortality in the more susceptible Green River stock, suggesting the possibility that the stocks may differ in their tolerance to infection by the bacterium. Interferon-y, inducible nitric oxide synthase (iNOS), Mx-1, and transferrin gene expression were up-regulated in both stocks following challenge. A trend of higher iNOS gene expression at later time points (≥28 d post-infection) was observed in the lower surviving Green River stock, suggesting the possibility that higher iNOS expression may contribute to greater pathology in that stock.

  18. Creel survey sampling designs for estimating effort in short-duration Chinook salmon fisheries

    Science.gov (United States)

    McCormick, Joshua L.; Quist, Michael C.; Schill, Daniel J.

    2013-01-01

    Chinook Salmon Oncorhynchus tshawytscha sport fisheries in the Columbia River basin are commonly monitored using roving creel survey designs and require precise, unbiased catch estimates. The objective of this study was to examine the relative bias and precision of total catch estimates using various sampling designs to estimate angling effort under the assumption that mean catch rate was known. We obtained information on angling populations based on direct visual observations of portions of Chinook Salmon fisheries in three Idaho river systems over a 23-d period. Based on the angling population, Monte Carlo simulations were used to evaluate the properties of effort and catch estimates for each sampling design. All sampling designs evaluated were relatively unbiased. Systematic random sampling (SYS) resulted in the most precise estimates. The SYS and simple random sampling designs had mean square error (MSE) estimates that were generally half of those observed with cluster sampling designs. The SYS design was more efficient (i.e., higher accuracy per unit cost) than a two-cluster design. Increasing the number of clusters available for sampling within a day decreased the MSE of estimates of daily angling effort, but the MSE of total catch estimates was variable depending on the fishery. The results of our simulations provide guidelines on the relative influence of sample sizes and sampling designs on parameters of interest in short-duration Chinook Salmon fisheries.

  19. Decreased mortality of lake michigan chinook salmon after bacterial kidney disease challenge: Evidence for pathogen-driven selection?

    Science.gov (United States)

    Purcell, M.K.; Murray, A.L.; Elz, A.; Park, L.K.; Marcquenski, S.V.; Winton, J.R.; Alcorn, S.W.; Pascho, R.J.; Elliott, D.G.

    2008-01-01

    In the late 1960s, Chinook salmon Oncorhynchus tshawytscha from the Green River, Washington, were successfully introduced into Lake Michigan. During spring from1988 to 1992, large fish die-offs affecting Chinook salmon occurred in the lake. Multiple ecological factors probably contributed to the severity of the fish kills, but the only disease agent found regularly was Renibacterium salmoninarum, the causative agent of bacterial kidney disease. in this study, survival after challenge by R. salmoninarum was compared between two Chinook salmon stocks: a Lake Michigan stock from Wisconsin (WI) and the progenitor stock from the Green River. We found that the WI stock had significantly greater survival than the Green River stock. Next, the WI and Green River stocks were exposed to the marine pathogen Listonella anguillarum (formerly Vibrio anguillarum), one of the causative agents of vibriosis; survival after this challenge was significantly poorer for the WI stock than for the Green River stock. A close genetic relationship between the Green River and WI stocks was confirmed by analyzing 13 microsatellite loci. These results collectively suggest that disease susceptibility of Lake Michigan Chinook salmon has diverged from that of the source population, possibly in response to pathogen-driven selection. ?? Copyright by the American Fisheries Society 2008.

  20. Chinook Salmon Adult Abundance Monitoring; Hydroacoustic Assessment of Chinook Salmon Escapement to the Secesh River, Idaho, 2002-2004 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, R.; McKinstry, C.; Mueller, R.

    2004-01-01

    Accurate determination of adult salmon spawner abundance is key to the assessment of recovery actions for wild Snake River spring/summer Chinook salmon (Onchorynchus tshawytscha), a species listed as 'threatened' under the Endangered Species Act (ESA). As part of the Bonneville Power Administration Fish and Wildlife Program, the Nez Perce Tribe operates an experimental project in the South Fork of the Salmon River subbasin. The project has involved noninvasive monitoring of Chinook salmon escapement on the Secesh River between 1997 and 2000 and on Lake Creek since 1998. The overall goal of this project is to accurately estimate adult Chinook salmon spawning escapement numbers to the Secesh River and Lake Creek. Using time-lapse underwater video technology in conjunction with their fish counting stations, Nez Perce researchers have successfully collected information on adult Chinook salmon spawner abundance, run timing, and fish-per-redd numbers on Lake Creek since 1998. However, the larger stream environment in the Secesh River prevented successful implementation of the underwater video technique to enumerate adult Chinook salmon abundance. High stream discharge and debris loads in the Secesh caused failure of the temporary fish counting station, preventing coverage of the early migrating portion of the spawning run. Accurate adult abundance information could not be obtained on the Secesh with the underwater video method. Consequently, the Nez Perce Tribe now is evaluating advanced technologies and methodologies for measuring adult Chinook salmon abundance in the Secesh River. In 2003, the use of an acoustic camera for assessing spawner escapement was examined. Pacific Northwest National Laboratory, in a collaborative arrangement with the Nez Perce Tribe, provided the technical expertise to implement the acoustic camera component of the counting station on the Secesh River. This report documents the first year of a proposed three-year study to determine

  1. The Design and Analysis of Salmonid Tagging Studies in the Columbia Basin : Volume XVII : Effects of Ocean Covariates and Release Timing on First Ocean-Year Survival of Fall Chinook Salmon from Oregon and Washington Coastal Hatcheries.

    Energy Technology Data Exchange (ETDEWEB)

    Burgess, Caitlin; Skalski, John R.

    2001-05-01

    Effects of oceanographic conditions, as well as effects of release-timing and release-size, on first ocean-year survival of subyearling fall chinook salmon were investigated by analyzing CWT release and recovery data from Oregon and Washington coastal hatcheries. Age-class strength was estimated using a multinomial probability likelihood which estimated first-year survival as a proportional hazards regression against ocean and release covariates. Weight-at-release and release-month were found to significantly effect first year survival (p < 0.05) and ocean effects were therefore estimated after adjusting for weight-at-release. Negative survival trend was modeled for sea surface temperature (SST) during 11 months of the year over the study period (1970-1992). Statistically significant negative survival trends (p < 0.05) were found for SST during April, June, November and December. Strong pairwise correlations (r > 0.6) between SST in April/June, April/November and April/December suggest the significant relationships were due to one underlying process. At higher latitudes (45{sup o} and 48{sup o}N), summer upwelling (June-August) showed positive survival trend with survival and fall (September-November) downwelling showed positive trend with survival, indicating early fall transition improved survival. At 45{sup o} and 48{sup o}, during spring, alternating survival trends with upwelling were observed between March and May, with negative trend occurring in March and May, and positive trend with survival occurring in April. In January, two distinct scenarios of improved survival were linked to upwelling conditions, indicated by (1) a significant linear model effect (p < 0.05) showing improved survival with increasing upwelling, and (2) significant bowl-shaped curvature (p < 0.05) of survival with upwelling. The interpretation of the effects is that there was (1) significantly improved survival when downwelling conditions shifted to upwelling conditions in January (i

  2. Thiamine and fatty acid content of Lake Michigan Chinook salmon

    Science.gov (United States)

    Honeyfield, D.C.; Peters, A.K.; Jones, M.L.

    2008-01-01

    Nutritional status of Lake Michigan Chinook salmon (Oncorhynchus tshawytscha) is inadequately documented. An investigation was conducted to determine muscle and liver thiamine content and whole body fatty acid composition in small, medium and large Chinook salmon. Muscle and liver thiamine concentrations were highest in small salmon, and tended to decrease with increasing fish size. Muscle thiamine was higher in fall than spring in large salmon. The high percentage of Chinook salmon (24-32% in fall and 58-71% in spring) with muscle thiamine concentration below 500 pmol/g, which has been associated with loss of equilibrium and death in other Great Lake salmonines, suggest that Chinook appear to rely less on thiamine than other Great Lakes species for which such low concentrations would be associated with thiamine deficiency (Brown et al. 2005b). A positive correlation was observed between liver total thiamine and percent liver lipids (r = 0.53, P saturated fatty acids (sum) were observed in whole body tissue lipid. In summary, thiamine, a dietary essential vitamin, and individual fatty acids were found to vary in Lake Michigan Chinook salmon by fish size and season of the year.

  3. Effects of Hydroelectric Dam Operations on the Restoration Potential of Snake River Fall Chinook Salmon (Oncorhynchus tshawytscha) Spawning Habitat Final Report, October 2005 - September 2007.

    Energy Technology Data Exchange (ETDEWEB)

    Hanrahan, Timothy P.; Richmond, Marshall C.; Arntzen, Evan V. [Pacific Northwest National Laboratory

    2007-11-13

    This report describes research conducted by the Pacific Northwest National Laboratory for the Bonneville Power Administration (BPA) as part of the Fish and Wildlife Program directed by the Northwest Power and Conservation Council. The study evaluated the restoration potential of Snake River fall Chinook salmon spawning habitat within the impounded lower Snake River. The objective of the research was to determine if hydroelectric dam operations could be modified, within existing system constraints (e.g., minimum to normal pool levels; without partial removal of a dam structure), to increase the amount of available fall Chinook salmon spawning habitat in the lower Snake River. Empirical and modeled physical habitat data were used to compare potential fall Chinook salmon spawning habitat in the Snake River, under current and modified dam operations, with the analogous physical characteristics of an existing fall Chinook salmon spawning area in the Columbia River. The two Snake River study areas included the Ice Harbor Dam tailrace downstream to the Highway 12 bridge and the Lower Granite Dam tailrace downstream approximately 12 river kilometers. These areas represent tailwater habitat (i.e., riverine segments extending from a dam downstream to the backwater influence from the next dam downstream). We used a reference site, indicative of current fall Chinook salmon spawning areas in tailwater habitat, against which to compare the physical characteristics of each study site. The reference site for tailwater habitats was the section extending downstream from the Wanapum Dam tailrace on the Columbia River. Fall Chinook salmon spawning habitat use data, including water depth, velocity, substrate size and channelbed slope, from the Wanapum reference area were used to define spawning habitat suitability based on these variables. Fall Chinook salmon spawning habitat suitability of the Snake River study areas was estimated by applying the Wanapum reference reach habitat

  4. Preliminary evaluation of the behavior and movements of adult spring Chinook salmon in the Chehalis River, southwestern Washington, 2014

    Science.gov (United States)

    Liedtke, Theresa L.; Hurst, William R.; Tomka, Ryan G.; Kock, Tobias J.; Zimmerman, Mara S.

    2017-01-30

    spawner and one fish with an unknown fate. Tagged fish showed limited movements during the peak water temperatures in July and August, and were not frequently detected at sites where water temperatures exceeded 21 °C. The mouths of the Skookumchuck and Newaukum Rivers were commonly used by tagged fish for extended periods during peak water temperatures and study fish with a fate of spawner were last detected in these tributaries.This pilot study represents a substantial contribution to the understanding of spring Chinook salmon in the Chehalis River Basin, and provides information for the design and execution of future evaluations. The water temperatures and flow conditions during the 2014 study period were not typical of the historical conditions in the basin and the numbers of tagged fish monitored was relatively low, so results should be interpreted with those cautions in mind.

  5. Monitoring of Subyearling Chinook Salmon Survival and Passage at Bonneville Dam, Summer 2010

    Energy Technology Data Exchange (ETDEWEB)

    Ploskey, Gene R.; Weiland, Mark A.; Carlson, Thomas J.

    2012-09-01

    The purpose of this study was to estimate dam passage and route specific survival rates for subyearling Chinook salmon smolts to a primary survival-detection array located 81 km downstream of the dam, evaluate a BGS located in the B2 forebay, and evaluate effects of two spill treatments. The 2010 study also provided estimates of forebay residence time, tailrace egress time, spill passage efficiency (SPE), and spill + B2 Corner Collector (B2CC) efficiency, as required in the Columbia Basin Fish Accords. In addition, the study estimated forebay passage survival and survival of fish traveling from the forebay entrance array, through the dam and downstream through 81 km of tailwater.

  6. Monitoring of Subyearling Chinook Salmon Survival and Passage at Bonneville Dam, Summer 2010

    Energy Technology Data Exchange (ETDEWEB)

    Ploskey, Gene R.; Weiland, Mark A.; Carlson, Thomas J.

    2011-02-01

    The purpose of this study was to estimate dam passage and route specific survival rates for subyearling Chinook salmon smolts to a primary survival-detection array located 81 km downstream of the dam, evaluate a BGS located in the B2 forebay, and evaluate effects of two spill treatments. The 2010 study also provided estimates of forebay residence time, tailrace egress time, spill passage efficiency (SPE), and spill + B2 Corner Collector (B2CC) efficiency, as required in the Columbia Basin Fish Accords. In addition, the study estimated forebay passage survival and survival of fish traveling from the forebay entrance array, through the dam and downstream through 81 km of tailwater.

  7. Identification of Saprolegnia Spp. Pathogenic in Chinook Salmon : Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Whisler, Howard C.

    1997-06-01

    This project has developed procedures to assess the role of the fungal parasite, Saprolegnia in the biology of salmon, particularly adult Chinook, in the Columbia River Basin. Both morphological and DNA ``fingerprinting`` surveys reveal that Saprolegnia parasitica (=S. diclina, Type I) is the most common pathogen of these fish. In the first phase of this study 92% of 620 isolates, from salmon lesions, conformed to this taxa of Saprolegnia. In the current phase, the authors have developed variants of DNA fingerprinting (RAPD and SWAPP analysis) that permit examination of the sub-structure of the parasite population. These results confirm the predominance of S. parasitica, and suggest that at least three different sub-groups of this fungus occur in the Pacific N.W., USA. The use of single and paired primers with PCR amplification permits identification of pathogenic types, and distinction from other species of the genus considered to be more saprophytic in character. A year`s survey of saprolegniaceous fungi from Lake Washington indicated that the fish-pathogen was not common in the water column. Where and how fish encounter this parasite can be approached with the molecular tags identified in this project.

  8. Compliance Monitoring of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, 2012

    Energy Technology Data Exchange (ETDEWEB)

    Skalski, J. R.; Townsend, Richard L.; Seaburg, Adam; Weiland, Mark A.; Woodley, Christa M.; Hughes, James S.; Ploskey, Gene R.; Deng, Zhiqun; Carlson, Thomas J.

    2013-05-01

    The purpose of this compliance study was to estimate dam passage survival of yearling and subyearling Chinook salmon and steelhead smolts at John Day Dam during the spring and summer outmigrations in 2012. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 for spring migrants and greater than or equal to 0.93 for summer migrants, estimated with a standard error (SE) less than or equal to 0.015. The study also estimated smolt passage survival from the forebay 2 km upstream of the dam to the tailrace 3 km downstream of the dam, as well as the forebay residence time, tailrace egress time, spill passage efficiency (SPE), and fish passage efficiency (FPE), as required in the Columbia Basin Fish Accords (Fish Accords). A virtual/paired-release design was used to estimate dam passage survival at John Day Dam. The approach included releases of smolts, tagged with acoustic micro-transmitters, above John Day Dam that contributed to the formation of a virtual release at the face of John Day Dam. A survival estimate from this release was adjusted by a paired release below John Day Dam. A total of 3376 yearling Chinook salmon, 5726 subyearling Chinook salmon, and 3239 steelhead smolts were used in the virtual releases. Sample sizes for the below-dam paired releases (R2 and R3, respectively) were 997 and 995 for yearling Chinook salmon smolts, 986 and 983 for subyearling Chinook salmon smolts, and 1000 and 1000 for steelhead smolts. The Juvenile Salmon Acoustic Telemetry System (JSATS) tags were manufactured by Advanced Telemetry Systems. Model SS300 tags, weighing 0.304 g in air, were surgically implanted in yearling and subyearling Chinook salmon, and Model SS130 tag, weighing 0.438 g in air, were surgically implanted in juvenile steelhead for this investigation. The intent of the spring study was to estimate dam passage survival during both 30% and 40% spill conditions. The two

  9. Emigration of Natural and Hatchery Chinook Salmon and Steelhead Smolts from the Imnaha River, Oregon, 1998-1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Cleary, Peter J.; Blenden, Michael L.; Kucera, Paul A.

    2002-08-01

    This report summarizes the results of the Lower Snake River Compensation Plan Hatchery Evaluation Studies (LSRCP) and the Imnaha Smolt Monitoring Program (SMP) for the 1999 smolt migration from the Imnaha River, Oregon. These studies were designed and closely coordinated to provide information about juvenile natural and hatchery chinook salmon (Oncorhynchus tshawytscha) and steelhead (Oncorhynchus mykiss) biological characteristics, behavior and emigrant timing, survival, arrival timing and travel time to the Snake River dams and McNary Dam on the Columbia River. Data collected from these studies are shared with the Fish Passage Center (FPC). These data are essential to quantify smolt survival rates under the current passage conditions and to evaluate the future recovery strategies that seek to optimize smolt survival through the hydroelectric system. Information shared with the FPC assists with in-season shaping of flow and spill management requests in the Snake River reservoirs. The Bonneville Power Administration and the United States Fish and Wildlife Service contracted the Nez Perce Tribe (NPT) to monitor emigration timing and tag 21,200 emigrating natural and hatchery chinook salmon and steelhead smolts from the Imnaha River during the spring emigration period (March 1-June 15) with passive integrated transponder (PIT) tags. The completion of trapping in the spring of 1999 marked the eighth year of emigration studies on the Imnaha River and the sixth year of participating in the FPC smolt monitoring program. Monitoring and evaluation objectives were to: (1) Determine spring emigration timing of chinook salmon and steelhead smolts collected at the Imnaha River trap. (2) Evaluate effects of flow, temperature and other environmental factors on emigration timing. (3) Monitor the daily catch and biological characteristics of juvenile chinook salmon and steelhead smolts collected at the Imnaha River screw trap. (4) Determine emigration timing, travel time, and in

  10. Assessment of High Rates of Precocious Male Maturation in a Spring Chinook Salmon Supplementation Hatchery Program, Annual Report 2002-2003.

    Energy Technology Data Exchange (ETDEWEB)

    Larsen, Donald; Beckman, Brian; Cooper, Kathleen

    2003-08-01

    The Yakima River Spring Chinook Salmon Supplementation Project in Washington State is currently one of the most ambitious efforts to enhance a natural salmon population in the United States. Over the past five years we have conducted research to characterize the developmental physiology of naturally- and hatchery-reared wild progeny spring chinook salmon (Oncorhynchus tshawytscha) in the Yakima River basin. Fish were sampled at the main hatchery in Cle Elum, at remote acclimation sites and, during smolt migration, at downstream dams. Throughout these studies the maturational state of all fish was characterized using combinations of visual and histological analysis of testes, gonadosomatic index (GSI), and measurement of plasma 11-ketotestosterone (11-KT). We established that a plasma 11-KT threshold of 0.8 ng/ml could be used to designate male fish as either immature or precociously maturing approximately 8 months prior to final maturation (1-2 months prior to release as 'smolts'). Our analyses revealed that 37-49% of the hatchery-reared males from this program undergo precocious maturation at 2 years of age and a proportion of these fish appear to residualize in the upper Yakima River basin throughout the summer. An unnaturally high incidence of precocious male maturation may result in loss of potential returning anadromous adults, skewing of female: male sex ratios, ecological, and genetic impacts on wild populations and other native species. Precocious male maturation is significantly influenced by growth rate at specific times of year and future studies will be conducted to alter maturation rates through seasonal growth rate manipulations.

  11. Survival of Juvenile Chinook Salmon Passing the Bonneville Dam Spillway in 2007

    Energy Technology Data Exchange (ETDEWEB)

    Ploskey, Gene R.; Weiland, Mark A.; Hughes, James S.; Zimmerman, Shon A.; Durham, Robin E.; Fischer, Eric S.; Kim, Jina; Townsend, R. L.; Skalski, J. R.; Buchanan, Rebecca A.; McComas, Roy L.

    2008-12-01

    The U.S. Army Corps of Engineers Portland District (CENWP) funds numerous evaluations of fish passage and survival on the Columbia River. In 2007, the CENWP asked Pacific Northwest National Laboratory to conduct an acoustic telemetry study to estimate the survival of juvenile Chinook salmon passing the spillway at Bonneville Dam. This report documents the study results which are intended to be used to improve the conditions juvenile anadromous fish experience when passing through the dams that the Corps operates on the river.

  12. Compliance Monitoring of Subyearling Chinook Salmon Survival and Passage at The Dalles Dam, Summer 2012

    Energy Technology Data Exchange (ETDEWEB)

    Skalski, J. R.; Townsend, Richard L.; Seaburg, Adam; Ploskey, Gene R.; Weiland, Mark A.; Hughes, James S.; Woodley, Christa M.; Deng, Zhiqun; Carlson, Thomas J.; Johnson, Gary E.

    2013-05-01

    The purpose of this compliance study was to estimate dam passage survival of subyearling Chinook salmon at The Dalles Dam during summer 2012. Under the 2008 Federal Columbia River Power System Biological Opinion, dam passage survival is required to be greater than or equal to 0.93 and estimated with a standard error (SE) less than or equal to 0.015. The study also estimated survival from the forebay 2 km upstream of the dam and through the tailrace to 2 km downstream of the dam, forebay residence time, tailrace egress time, spill passage efficiency (SPE), and fish passage efficiency (FPE), as required by the 2008 Columbia Basin Fish Accords.

  13. Survival and Passage of Yearling and Subyearling Chinook Salmon and Steelhead at The Dalles Dam, 2010

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, Gary E.; Skalski, J. R.; Carlson, Thomas J.; Ploskey, Gene R.; Weiland, Mark A.; Deng, Zhiqun; Fischer, Eric S.; Hughes, James S.; Khan, Fenton; Kim, Jin A.; Townsend, Richard L.

    2011-12-01

    The acoustic telemetry study reported here was conducted by researchers at Pacific Northwest National Laboratory (PNNL) and the University of Washington (UW) for the U.S. Army Corps of Engineers, Portland District (USACE). The purpose of the study was to estimate dam passage survival and other performance measures for yearling and subyearling Chinook salmon and steelhead at The Dalles Dam as stipulated by the 2008 Biological Opinion on operation of the Federal Columbia River Power System (FCRPS) and 2008 Columbia Basin Fish Accords.

  14. Genetic differences in growth, migration, and survival between hatchery and wild steelhead and Chinook salmon: Introduction and executive summary

    Science.gov (United States)

    Rubin, Steve P.; Reisenbichler, Reginald; Wetzel, Lisa A.; Hayes, Michael C.

    2012-01-01

    This report presents results of studies testing for genetically based differences in performance (growth, migration, and survival) between hatchery and wild populations of steelhead and Chinook salmon (Project Number 90-052). The report is organized into 10 chapters with a general study introduction preceding the first chapter. A growing body of data shows that domestication and a resulting loss of fitness for natural rearing occur in hatchery populations of anadromous salmonids; however, the magnitude of domestication will vary among species and hatchery programs. Better information on domestication is needed to accurately predict the consequences when hatchery and wild fish interbreed. The intent of hatchery supplementation is to increase natural production through introduction of hatchery fish into natural production areas. The goal of this study was to provide managers with information on the genetic risks of hatchery supplementation to wild populations of Columbia River Basin summer steelhead and spring Chinook salmon.

  15. Survival and Passage of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead at McNary Dam, 2012

    Energy Technology Data Exchange (ETDEWEB)

    Hughes, James S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Weiland, Mark A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Woodley, Christa M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Ploskey, Gene R. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Carpenter, Scott M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Hennen, Matthew J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Fischer, Eric S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Batton, George [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Carlson, Thomas J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Cushing, Aaron W. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Deng, Zhiqun [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Etherington, D. J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Fu, Tao [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Greiner, Michael J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Ingraham, John M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Kim, Jin A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Li, Xi [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Martinez, Jayson J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Mitchell, T. D. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Rayamajhi, Bishes [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Seaburg, Adam [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Skalski, J. R. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Townsend, Richard L. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Wagner, Katie A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Zimmerman, Shon A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2013-12-23

    The study was designed to evaluate the passage and survival of yearling and subyearling Chinook salmon and juvenile steelhead at McNary Dam as stipulated by the 2008 Biological Opinion and Fish Accords and to assess performance measures including route-specific fish passage proportions, travel times, and survival based upon a virtual/paired-release model. This study supports the USACE’s continual effort to improve conditions for juvenile anadromous fish passing through Columbia River dams.

  16. Chronic oral DDT toxicity in juvenile coho and chinook salmon

    Science.gov (United States)

    Buhler, Donald R.; Rasmusson, Mary E.; Shanks, W.E.

    1969-01-01

    Technical and p,p′-DDT was incorporated into test diets and fed to juvenile chinook and coho salmon for periods as long as 95 days. Pure p,p′-DDT was slightly more toxic to young salmon than was the technical DDT mixture. Chinook salmon appeared to be 2–3 times more sensitive to a given concentration of DDT in the diet than were coho salmon. The size of the fish greatly influenced toxicity, smaller younger fish being more susceptible to a given diet than larger older fish. The dose of DDT accumulated within the median survival time ranged from 27–73 mg/kg for chinook salmon and from 56–72 mg/kg for coho salmon. The extrapolated 90-dose LD50 (Hayes, 1967) for young chinook and coho salmon were 0.0275 and 0.064 mg/kg/day, respectively. Liver size decreased on prolonged feeding with DDT, and carcass lipid content was increased. A severe surface ulceration of the nose region appeared in coho salmon fed DDT over long periods. In addition, an interesting localized degeneration of the distal convoluted tubule was observed in the kidney of coho salmon receiving DDT.

  17. Identification of the Spawning, Rearing, and Migratory Requirements of Fall Chinook Salmon in the Columbia River Basin, Annual Report 1993.

    Energy Technology Data Exchange (ETDEWEB)

    Rondorf, Dennis W.; Tiffan, Kenneth F.

    1994-12-01

    Recovery efforts for the endangered fall chinook salmon necessitates knowledge of the factors limiting the various life history stages. This study attempts to identify those physical and biological factors which affect spawning of the fish in the free-flowing Snake River and their rearing seward migration through Columbia River basin reservoirs. The spawning was generally a November event in 1993, with some activity in late Oct. and early Dec. Spawning habitat availability was assessed by applying hydraulic and habitat models to known fall chinook salmon spawning sites. Juveniles were seined and PIT tagged in the free-flowing Snake River, and in the Columbia River in he Hanford Reach and in McNary Reservoir. Subyearling fish were marked at McNary Dam to relate river flow and migration patterns of juveniles to adult returns. Hydroacoustic surveys were conducted on McNary and John Day reservoirs and in net pens.

  18. Survival Estimates for the Passage of Juvenile Chinook Salmon through Snake River Dams and Reservoirs, 1993 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Iwamoto, Robert N.; Sandford, Benjamin P.; McIntyre, Kenneth W.

    1994-04-01

    A pilot study was conducted to estimate survival of hatchery-reared yearling chinook salmon through dams and reservoirs on the Snake River. The goals of the study were to: (1) field test and evaluate the Single-Release, Modified-Single-Release, and Paired-Release Models for the estimation of survival probabilities through sections of a river and hydroelectric projects; (2) identify operational and logistical constraints to the execution of these models; and (3) determine the usefulness of the models in providing estimates of survival probabilities. Field testing indicated that the numbers of hatchery-reared yearling chinook salmon needed for accurate survival estimates could be collected at different areas with available gear and methods. For the primary evaluation, seven replicates of 830 to 1,442 hatchery-reared yearling chinook salmon were purse-seined from Lower Granite Reservoir, PIT tagged, and released near Nisqually John boat landing (River Kilometer 726). Secondary releases of PIT-tagged smolts were made at Lower Granite Dam to estimate survival of fish passing through turbines and after detection in the bypass system. Similar secondary releases were made at Little Goose Dam, but with additional releases through the spillway. Based on the success of the 1993 pilot study, the authors believe that the Single-Release and Paired-Release Models will provide accurate estimates of juvenile salmonid passage survival for individual river sections, reservoirs, and hydroelectric projects in the Columbia and Snake Rivers.

  19. Identification of the Spawning, Rearing, and Migratory Requirements of Fall Chinook Salmon in the Columbia River Basin, Annual Report 1994.

    Energy Technology Data Exchange (ETDEWEB)

    Rondorf, Dennis W.; Tiffan, Kenneth F.

    1996-08-01

    Spawning ground surveys were conducted in 1994 as part of a five year study of Snake River chinook salmon Oncorhynchus tshawyacha begun in 1991. Observations of fall chinook salmon spawning in the Snake River were limited to infrequent aerial red counts in the years prior to 1987. From 1987-1990, red counts were made on a limited basis by an interagency team and reported by the Washington Department of Fisheries. Starting in 1991, the U.S. Fish and Wildlife Service (USFWS), and other cooperating agencies and organizations, expanded the scope of spawning ground surveys to include: (1) additional aerial surveys to improve red counts and provide data on the timing of spawning; (2) the validation (ground truthing) of red counts from aerial surveys to improve count accuracy; (3) underwater searches to locate reds in water too deep to allow detection from the air; and (4) bathymetric mapping of spawning sites for characterizing spawning habitat. This document is the 1994 annual progress report for selected studies of fall chinook salmon. The studies were undertaken because of the growing concern about the declining salmon population in the Snake River basin.

  20. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dalles Dam, Spring 2010

    Energy Technology Data Exchange (ETDEWEB)

    Carlson, Thomas J.; Skalski, John R.

    2010-10-01

    The purpose of this compliance study was to estimate dam passage survival of yearling Chinook salmon and steelhead smolts at The Dalles Dam during spring 2010. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated smolt passage survival from the forebay boat-restricted zone (BRZ) to the tailrace BRZ at The Dalles Dam, as well as the forebay residence time, tailrace egress, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. A virtual/paired-release design was used to estimate dam passage survival at The Dalles Dam. The approach included releases of acoustic-tagged smolts above John Day Dam that contributed to the formation of a virtual release at the face of The Dalles Dam. A survival estimate from this release was adjusted by a paired release below The Dalles Dam. A total of 4,298 yearling Chinook salmon and 4,309 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation. The dam passage survival results are summarized as follows: Yearling Chinook Salmon 0.9641 (SE = 0.0096) and Steelhead 0.9535 (SE = 0.0097).

  1. Advanced Hydraulic Studies on Enhancing Particle Removal

    DEFF Research Database (Denmark)

    He, Cheng

    The removal of suspended solids and attached pollutants is one of the main treatment processes in wastewater treatment. This thesis presents studies on the hydraulic conditions of various particle removal facilities for possible ways to increase their treatment capacity and performance by utilizing...... and improving hydraulic conditions. Unlike most traditional theses which usually focus only on one particular subject of study, this thesis contains four relatively independent studies which cover the following topics: a newly proposed particle settling enhancement plate, the redesign of the inlet zone......, introduction and conclusions as well as the study results. All studies were carried out with a combination of numerical model and measurements. In the first part of the thesis a new concept of using a vortex to increase particle removal from liquid was proposed and the new particle settling enhancement plates...

  2. Efficacy of an infectious hematopoietic necrosis (IHN) virus DNA vaccine in Chinook Oncorhynchus tshawytscha and sockeye O. nerka salmon.

    Science.gov (United States)

    Garver, Kyle A; LaPatra, Scott E; Kurath, Gael

    2005-04-06

    The level of protective immunity was determined for Chinook Oncorhynchus tshawytscha and sockeye/kokanee salmon (anadromous and landlocked) O. nerka following intramuscular vaccination with a DNA vaccine against the aquatic rhabdovirus, infectious hematopoietic necrosis virus (IHNV). A DNA vaccine containing the glycoprotein gene of IHNV protected Chinook and sockeye/kokanee salmon against waterborne or injection challenge with IHNV, and relative percent survival (RPS) values of 23 to 86% were obtained under a variety of lethal challenge conditions. Although this is significant protection, it is less than RPS values obtained in previous studies with rainbow trout (O. mykiss). In addition to the variability in the severity of the challenge and inherent host susceptibility differences, it appears that use of a cross-genogroup challenge virus strain may lead to reduced efficacy of the DNA vaccine. Neutralizing antibody titers were detected in both Chinook and sockeye that had been vaccinated with 1.0 and 0.1 pg doses of the DNA vaccine, and vaccinated fish responded to viral challenges with higher antibody titers than mock-vaccinated control fish.

  3. Salinity effects on activity and expression of glutathione S-transferases in white sturgeon and Chinook salmon.

    Science.gov (United States)

    Donham, Rachel T; Morin, Dexter; Tjeerdema, Ronald S

    2006-02-01

    This study evaluated the activity and expression of the glutathione S-transferase (GST) detoxification isoenzymes in juvenile white sturgeon (Acipenser transmontanus) and Chinook salmon (Oncorhynchus tshawytscha) during acclimation from freshwater (2 per thousand) to estuarine (15 per thousand) salinity conditions. In white sturgeon, GST activity toward 1-chloro-2,4-dinitrobenzene (CDNB) increased significantly (P = 0.005; n = 5) with elevated salinity, but not for the Chinook salmon (P = 0.174; n = 10). GST activity of both sturgeon and salmon toward ethacrynic acid (ETHA) did not significantly change with elevated salinity (P = 0.516 with n = 3, and P = 0.125 with n = 3, respectively). Expression of the GST classes, and hepatic glutathione (GSH) concentration, as determined by HPLC, also did not significantly change with increased salinity. In conclusion, overall GST activity in white sturgeon, but not Chinook salmon, is stimulated by elevated water salinity, thus electrophilic chemicals such as pesticides may be more effectively detoxified by sturgeon as they undergo seaward migration.

  4. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at Bonneville Dam, Spring 2010

    Energy Technology Data Exchange (ETDEWEB)

    Ploskey, Gene R.; Faber, Derrek M.; Weiland, Mark A.; Carlson, Thomas J.

    2011-02-01

    The purpose of this study was to estimate the survival for yearling Chinook salmon and steelhead smolts during spring 2010 in a portion of the Columbia River that includes Bonneville Dam. The study estimated smolt survival from a virtual release at Bonneville Dam to a survival array 81 km downstream of Bonneville Dam. We also estimated median forebay residence time, median tailrace egress time, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. A single release design was used to estimate survival from Bonneville Dam to a primary array located 81 km downstream of Bonneville. The approach did not include a reference tailrace release. Releases of acoustic-tagged smolts above John Day Dam to Hood River contributed to the formation of virtual releases at a Bonneville Dam forebay entrance array and at the face of the dam. A total of 3,880 yearling Chinook salmon and 3,885 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation.

  5. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at Bonneville Dam, Spring 2010

    Energy Technology Data Exchange (ETDEWEB)

    Ploskey, Gene R.; Faber, Derrek M.; Weiland, Mark A.; Carlson, Thomas J.

    2012-09-01

    The purpose of this study was to estimate the survival for yearling Chinook salmon and steelhead smolts during spring 2010 in a portion of the Columbia River that includes Bonneville Dam. The study estimated smolt survival from a virtual release at Bonneville Dam to a survival array 81 km downstream of Bonneville Dam. We also estimated median forebay residence time, median tailrace egress time, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. A single release design was used to estimate survival from Bonneville Dam to a primary array located 81 km downstream of Bonneville. The approach did not include a reference tailrace release. Releases of acoustic-tagged smolts above John Day Dam to Hood River contributed to the formation of virtual releases at a Bonneville Dam forebay entrance array and at the face of the dam. A total of 3,880 yearling Chinook salmon and 3,885 steelhead smolts were tagged and released in the investigation. The Juvenile Salmon Acoustic Telemetry System (JSATS) tag model number ATS-156dB, weighing 0.438 g in air, was used in this investigation.

  6. Nonlethal gill biopsy does not affect juvenile chinook salmon implanted with radio transmitters

    Science.gov (United States)

    Martinelli-Liedtke, T. L.; Shively, R.S.; Holmberg, G.S.; Sheer, M.B.; Schrock, R.M.

    1999-01-01

    Using gastric and surgical transmitter implantation, we compared radio-tagged juvenile chinook salmon Oncorhynchus tshawytscha (T(O)) with tagged fish also having a gill biopsy (T(B)) to determine biopsy effects on fish implanted with radio transmitters. We found no evidence during the 21-d period to suggest that a gill biopsy reduced survival, growth, or gross condition of the tagged-biopsy group, regardless of transmitter implantation technique. We recorded 100% survival of all treatment groups. Relative growth rates of T(O) and T(B) fish did not differ significantly. Leukocrit and lysozyme levels were not significantly different among groups, suggesting that no signs of infection were present. Our findings suggest that small chinook salmon can tolerate the combination of transmitter implantation and gill biopsy without compromising condition relative to fish receiving only the transmitter. We believe a gill biopsy can be used in field telemetry studies, especially when physiological data are needed in addition to behavioral data.

  7. Investigations into the [Early] Life History of Spring Chinook Salmon in the Grande Ronde River Basin : Fish Research Project, Oregon : Annual Report 1994 : Project Period 1 June 1993 to 31 May 1994.

    Energy Technology Data Exchange (ETDEWEB)

    Keefe, MaryLouise

    1996-04-01

    This study was designed to describe aspects of the life history strategies of spring chinook salmon in the Grande Ronde basin. During the past year we focused on rearing and migration patterns of juveniles and surveys of spawning adults. The specific objectives for the early life history portion of the study were: Objective 1, document the annual in-basin migration patterns for spring chinook salmon juveniles in the upper Grande Ronde River, including the abundance of migrants, migration timing and duration; Objective 2, estimate and compare smolt survival indices to mainstem Columbia and Snake River dams for fall and spring migrating spring chinook salmon; Objective 3 initiate study of the winter habitat utilized by spring chinook salmon in the Grande Ronde River basin. The specific objectives for the spawning ground surveys were: Objective 4, conduct extensive and supplemental spring chinook salmon spawning ground surveys in spawning streams in the Grande Ronde and Imnaha basin, Objective 5; determine how adequately historic index area surveys index spawner abundance by comparing index counts to extensive and supplemental redd counts; Objective 6, determine what changes in index areas and timing of index surveys would improve the accuracy of index surveys; Objective 7, determine the relationship between number of redds observed and fish escapement for the Grande Ronde and Imnaha river basins.

  8. 50 CFR 226.205 - Critical habitat for Snake River sockeye salmon, Snake River fall chinook salmon, and Snake River...

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 7 2010-10-01 2010-10-01 false Critical habitat for Snake River sockeye salmon, Snake River fall chinook salmon, and Snake River spring/summer chinook salmon. 226.205 Section... Snake River sockeye salmon, Snake River fall chinook salmon, and Snake River spring/summer...

  9. Adult Chinook Salmon Abundance Monitoring in the Secesh River and Lake Creek, Idaho, 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Faurot, Dave; Kucera, Paul A.

    2001-05-01

    Underwater time-lapse video technology has been used to monitor adult spring and summer chinook salmon (Oncorhynchus tshawytscha) escapement into the Secesh River and Lake Creek, Idaho, since 1998. Underwater time-lapse videography is a passive methodology that does not trap or handle this Endangered Species Act listed species. Secesh River chinook salmon represent a wild spawning aggregate that has not been directly supplemented with hatchery fish. The Secesh River is also a control population under the Idaho Salmon Supplementation study. This project has demonstrated the successful application of underwater video adult salmon abundance monitoring technology in Lake Creek in 1998 and 1999. Emphasis of the project in 2000 was to determine if the temporary fish counting station could be installed early enough to successfully estimate adult spring and summer chinook salmon abundance in the Secesh River (a larger stream). Snow pack in the drainage was 93% of the average during the winter of 1999/2000, providing an opportunity to test the temporary count station structure. The temporary fish counting station was not the appropriate technology to determine adult salmon spawner abundance in the Secesh River. Due to its temporary nature it could not be installed early enough, due to high stream discharge, to capture the first upstream migrating salmon. A more permanent structure used with underwater video, or other technology needs to be utilized for accurate salmon escapement monitoring in the Secesh River. A minimum of 813 adult chinook salmon spawners migrated upstream past the Secesh River fish counting station to spawning areas in the Secesh River drainage. Of these fish, more than 324 migrated upstream into Lake Creek. The first upstream migrating adult chinook salmon passed the Secesh River and Lake Creek sites prior to operation of the fish counting stations on June 22. This was 17 and 19 days earlier than the first fish arrival at Lake Creek in 1998 and 1999

  10. Adult Chinook Salmon Abundance Monitoring in Lake Creek, Idaho, Annual Report 2001.

    Energy Technology Data Exchange (ETDEWEB)

    Faurot, Dave

    2002-12-01

    Underwater time-lapse video technology has been used to monitor adult spring and summer chinook salmon (Oncorhynchus tshawytscha) escapement into the Secesh River and Lake Creek, Idaho, since 1998. Underwater time- lapse videography is a passive methodology that does not trap or handle this Endangered Species Act listed species. Secesh River chinook salmon represent a wild spawning aggregate that has not been directly supplemented with hatchery fish. The Secesh River is also a control stream under the Idaho Salmon Supplementation study. This project has successfully demonstrated the application of underwater video monitoring to accurately quantify chinook salmon abundance in Lake Creek in 1998, 1999 and 2001. The adult salmon spawner escapement estimate into Lake Creek in 2001 was 697 fish, the largest escapement since the project began. Jack salmon comprised 10% of the spring migration. Snow pack in the drainage was 38% of the average during the winter of 2000/2001. The first fish passage on Lake Creek was recorded on June 9, 19 days after installation of the fish counting station and two weeks earlier than previously reported. Peak net upstream movement of 52 adults occurred on June 22. Peak of total movement activity was July 3. The last fish passed through the Lake Creek fish counting station on September 6. Redd count expansion methods were compared to underwater video determined salmon spawner abundance in Lake Creek in 2001. Expanded index area redd count point estimates and intensive area redd counts in 2001, estimated from 1.3 percent fewer to 56 percent greater number of spawners than underwater video determined spawner abundance. Redd count expansion values had unknown variation associated with the point estimates. Fish per redd numbers in Lake Creek have varied widely. In 2001 there were 2.07 fish per redd. In 1999, there were 3.58 fish per redd, and in 1998, with no jacks returning to spawn, there were 1.02 fish per redd. Migrating salmon in Lake Creek

  11. Investigations into the Early Life History of Naturally Produced Spring Chinook Salmon and Summer Steelhead in the Grande Ronde River Subbasin, Annual Report 2008 : Project Period 1 February 2008 to 31 January 2009.

    Energy Technology Data Exchange (ETDEWEB)

    Yanke, Jeffrey A.; Alfonse, Brian M.; Bratcher, Kyle W. [Oregon Department of Fish and Wildlife

    2009-07-31

    This study was designed to document and describe the status and life history strategies of spring Chinook salmon and summer steelhead in the Grande Ronde River Subbasin. We determined migration timing, abundance, and life-stage survival rates for juvenile spring Chinook salmon Oncorhynchus tshawytscha and summer steelhead O. mykiss in four streams during migratory year 2008 from 1 July 2007 through 30 June 2008. As observed in previous years of this study, spring Chinook salmon and steelhead exhibited fall and spring movements out of natal rearing areas, but did not begin their smolt migration through the Snake and lower Columbia River hydrosystem until spring. In this report we provide estimates of migrant abundance and migration timing for each study stream, and their survival and timing to Lower Granite Dam. We also document aquatic habitat conditions using water temperature and stream flow in four study streams in the subbasin.

  12. Effects of Hyporheic Exchange Flows on Egg Pocket Water Temperature in Snake River Fall Chinook Salmon Spawning Areas

    Energy Technology Data Exchange (ETDEWEB)

    Hanrahan, Timothy P.; Geist, David R.; Arntzen, Evan V.; Abernethy, Cary S.

    2004-09-24

    suggested that there was significant vertical hydrologic exchange during all time periods. The combined results of temperature monitoring and numerical modeling indicate that only two sites were significantly affected by short-term (hourly to daily) large magnitude changes in discharge. Although the two sites exhibited acute flux reversals between river water and hyporheic water resulting from short-term large magnitude changes in discharge, these flux reversals had minimal effect on emergence timing estimates. Indeed, the emergence timing estimates at all sites was largely unaffected by the changes in river stage resulting from hydropower operations at Hells Canyon Dam. Our results indicate that the range of emergence timing estimates due to differences among the eggs from different females can be as large as or larger than the emergence timing estimates due to site differences (i.e., bed temperatures within and among sites). We conclude that during the 2002-2003 fall chinook salmon incubation period, hydropower operations of Hells Canyon Dam had an insignificant effect on fry emergence timing at the study sites. It appears that short-term (i.e., hourly to daily) manipulations of discharge from the Hells Canyon Complex during the incubation period would not substantially alter egg pocket incubation temperatures, and thus would not affect fry emergence timing at the study sites. However, the use of hydropower operational manipulations at the Hells Canyon Complex to accelerate egg incubation and fry emergence should not be ruled out on the basis of only one water year's worth of study. Further investigation of the incubation environment of Snake River fall chinook salmon is warranted based on the complexity of hyporheic zone characteristics and the variability of surface/subsurface interactions among dry, normal, and wet water years.

  13. 50 CFR 226.204 - Critical habitat for Sacramento winter-run chinook salmon.

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 7 2010-10-01 2010-10-01 false Critical habitat for Sacramento winter-run chinook salmon. 226.204 Section 226.204 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL... § 226.204 Critical habitat for Sacramento winter-run chinook salmon. The following waterways, bottom...

  14. Behavior and movements of adult spring Chinook salmon (Oncorhynchus tshawytscha) in the Chehalis River Basin, southwestern Washington, 2015

    Science.gov (United States)

    Liedtke, Theresa L.; Zimmerman, Mara S.; Tomka, Ryan G.; Holt, Curt; Jennings, Lyle

    2016-09-14

    ). One fish released in the main-stem Chehalis River remained near the release location for 64 d before moving upstream.The final fates for the seven fish that moved upstream in the main-stem Chehalis River included two fish with unknown fates, two fish with a fate of pre-spawn mortality, and three fish that were assigned a fate of spawner. Four (36 percent) of the radio-tagged Chinook salmon released in the main-stem Chehalis River showed limited movement from their release sites, and were assigned fates of unknown (one fish), pre-spawn mortality (one fish), and spit/mortality (2 fish). The 12 spring Chinook salmon released in the South Fork Newaukum River remained in the South Fork Newaukum River throughout the study period. Five (42 percent) of these fish were actively moving through the spawning period and were assigned a fate of spawner. Seven (58 percent) of these fish were detected for a period following release, but their detection histories ended prior to the spawning period. The fates assigned to these seven fish included two fish with spit/mortality fates and five fish with fates of pre-spawn mortality. Tagged fish in both the Chehalis River and the South Fork Newaukum River showed limited movements during the peak water temperatures in July and August, and were not frequently detected at sites where water temperatures were greater than 21 °C. Pre-spawn mortality due to predation or harvest may be an important factor in the Chehalis River Basin as it was the assigned fate for 27 percent of the fish released in the main-stem Chehalis River and 42 percent of the fish released in the South Fork Newaukum River.This study represents a substantial contribution to the understanding of spring Chinook salmon in the Chehalis River Basin. The water temperatures and flow conditions during the 2015 study period were not typical of the historical conditions in the basin and the numbers of tagged fish monitored was relatively low, so results should be interpreted with those

  15. Redd Site Selection and Spawning Habitat Use by Fall Chinook Salmon, Hanford Reach, Columbia River : Final Report 1995 - 1998.

    Energy Technology Data Exchange (ETDEWEB)

    Geist, David R.

    1999-05-01

    year to year. The tendency to spawn in clusters suggests fall chinook salmon's use of spawning habitat is highly selective. Hydraulic characteristics of the redd clusters were significantly different than the habitat surrounding them. Velocity and lateral slope of the river bottom were the most important habitat variables in predicting redd site selection. While these variables explained a large proportion of the variance in redd site selection (86 to 96%), some unmeasured factors still accounted for a small percentage of actual spawning site selection. Chapter three describes the results from an investigation into the hyporheic characteristics of the two spawning areas studied in chapter two. This investigation showed that the magnitude and chemical characteristics of hyporheic discharge were different between and within two spawning areas. Apparently, fall chinook salmon used chemical and physical cues from the discharge to locate spawning areas. Finally, chapter four describes a unique method that was developed to install piezometers into the cobble bed of the Columbia River.

  16. Enhancing mathematics teachers' quality through Lesson Study.

    Science.gov (United States)

    Lomibao, Laila S

    2016-01-01

    The efficiency and effectivity of the learning experience is dependent on the teacher quality, thus, enhancing teacher's quality is vital in improving the students learning outcome. Since, the usual top-down one-shot cascading model practice for teachers' professional development in Philippines has been observed to have much information dilution, and the Southeast Asian Ministers of Education Organization demanded the need to develop mathematics teachers' quality standards through the Southeast Asia Regional Standards for Mathematics Teachers (SEARS-MT), thus, an intensive, ongoing professional development model should be provided to teachers. This study was undertaken to determine the impact of Lesson Study on Bulua National High School mathematics teachers' quality level in terms of SEARS-MT dimensions. A mixed method of quantitative-qualitative research design was employed. Results of the analysis revealed that Lesson Study effectively enhanced mathematics teachers' quality and promoted teachers professional development. Teachers positively perceived Lesson Study to be beneficial for them to become a better mathematics teacher.

  17. Estuarine chinook capacity - Estimating changes in juvenile Chinook rearing area and carrying capacity in estuarine and freshwater habitats of the Puget Sound region

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This project has two objectives: 1. Estimate the amount of rearing habitat available to juvenile Chinook salmon currently and historically (i.e., ~1850s) throughout...

  18. Monitoring of Juvenile Subyearling Chinook Salmon Survival and Passage at John Day Dam, Summer 2010

    Energy Technology Data Exchange (ETDEWEB)

    Weiland, Mark A.; Ploskey, Gene R.; Hughes, James S.; Woodley, Christa M.; Deng, Zhiqun; Carlson, Thomas J.; Skalski, J. R.; Townsend, Richard L.

    2012-11-15

    The purpose of this study was to evaluate dam passage survival of subyearling Chinook salmon (Oncorhynchus tshawytscha; CH0) at John Day Dam (JDA) during summer 2010. This study was conducted by researchers from the Pacific Northwest National Laboratory (PNNL) in collaboration with the Pacific States Marine Fisheries Commission (PSMFC) and the University of Washington (UW). The study was designed to estimate the effects of 30% and 40% spill treatment levels on single release survival rates of CH0 passing through two reaches: (1) the dam, and 40 km of tailwater, (2) the forebay, dam, and 40 km of tailwater. The study also estimated additional passage performance measures which are stipulated in the Columbia Basin Fish Accords.

  19. The effect of chronic chromium exposure on the health of Chinook salmon (Oncorhynchus tshawytscha)

    Energy Technology Data Exchange (ETDEWEB)

    Farag, Aida M. [United States Geological Survey, Columbia Environmental Research Center, Jackson Field Research Station, P.O. Box 1089, Jackson, WY 83001 (United States)]. E-mail: aida_farag@usgs.gov; May, Thomas [United States Geological Survey, Columbia Environmental Research Center, Columbia, MO 65201 (United States); Marty, Gary D. [Department of Anatomy, Physiology, and Cell Biology, School of Veterinary Medicine, University of California, 1 Shields Ave., Davis, CA 95616-8732 (United States); Easton, Michael [International EcoGen Inc., 2015 McLallen Court, North Vancouver, BC, Canada V7P 3H6 (Canada); Harper, David D. [United States Geological Survey, Columbia Environmental Research Center, Jackson Field Research Station, P.O. Box 1089, Jackson, WY 83001 (United States); Little, Edward E. [United States Geological Survey, Columbia Environmental Research Center, Columbia, MO 65201 (United States); Cleveland, Laverne [United States Geological Survey, Columbia Environmental Research Center, Columbia, MO 65201 (United States)

    2006-03-10

    This study was designed to determine fish health impairment of Chinook salmon (Oncorhynchus tshawytscha) exposed to chromium. Juvenile Chinook salmon were exposed to aqueous chromium concentrations (0-266 {mu}g l{sup -1}) that have been documented in porewater from bottom sediments and in well waters near salmon spawning areas in the Columbia River in the northwestern United States. After Chinook salmon parr were exposed to 24 and 54 {mu}g Cr l{sup -1} for 105 days, neither growth nor survival of parr was affected. On day 105, concentrations were increased from 24 to 120 {mu}g Cr l{sup -1} and from 54 to 266 {mu}g Cr l{sup -1} until the end of the experiment on day 134. Weight of parr was decreased in the 24/120 {mu}g Cr l{sup -1} treatment, and survival was decreased in the 54/266 {mu}g Cr l{sup -1} treatment. Fish health was significantly impaired in both the 24/120 and 54/266 {mu}g Cr l{sup -1} treatments. The kidney is the target organ during chromium exposures through the water column. The kidneys of fish exposed to the greatest concentrations of chromium had gross and microscopic lesions (e.g. necrosis of cells lining kidney tububules) and products of lipid peroxidation were elevated. These changes were associated with elevated concentrations of chromium in the kidney, and reduced growth and survival. Also, variations in DNA in the blood were associated with pathological changes in the kidney and spleen. These changes suggest that chromium accumulates and enters the lipid peroxidation pathway where fatty acid damage and DNA damage (expressed as chromosome changes) occur to cause cell death and tissue damage. While most of the physiological malfunctions occurred following parr exposures to concentrations {>=}120 {mu}g Cr l{sup -1}, nuclear DNA damage followed exposures to 24 {mu}g Cr l{sup -1}, which was the smallest concentration tested. The abnormalities measured during this study are particularly important because they are associated with impaired growth

  20. Performance Assessment of Suture Type in Juvenile Chinook Salmon Surgically Implanted with Acoustic Transmitters

    Energy Technology Data Exchange (ETDEWEB)

    Deters, Katherine A.; Brown, Richard S.; Carter, Kathleen M.; Boyd, James W.

    2009-02-27

    The objective of this study was to determine the best overall suture material to close incisions from the surgical implantation of Juvenile Salmon Acoustic Telemetry System (JSATS) acoustic microtransmitters in subyearling Chinook salmon Oncorhynchus tshawytscha. The effects of seven suture materials, four surgeons, and two water temperatures on suture retention, incision openness, tag retention, tissue inflammation, and tissue ulceration were quantified. The laboratory study, conducted by researchers at the Pacific Northwest National Laboratory, supports a larger effort under way for the U.S. Army Corps of Engineers, Portland District, aimed at determining the suitability of acoustic telemetry for estimating short- and longer-term (30-60 days) juvenile-salmonid survival at Columbia and Snake River dams and through the lower Columbia River.

  1. Effects of Hyporheic Exchange Flows on Egg Pocket Water Temperature in Snake River Fall Chinook Salmon Spawning Areas, 2002-2003 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hanrahan, T.; Geist, D.; Arntzen, C. (Pacific Northwest National Laboratory)

    2004-09-01

    The development of the Snake River hydroelectric system has affected fall Chinook salmon smolts by shifting their migration timing to a period (mid- to late-summer) when downstream reservoir conditions are unfavorable for survival. Subsequent to the Snake River Chinook salmon fall-run Evolutionary Significant Unit being listed as Threatened under the Endangered Species Act, recovery planning has included changes in hydrosystem operations (e.g., summer flow augmentation) to improve water temperature and flow conditions during the juvenile Chinook salmon summer migration period. In light of the limited water supplies from the Dworshak reservoir for summer flow augmentation, and the associated uncertainties regarding benefits to migrating fall Chinook salmon smolts, additional approaches for improved smolt survival need to be evaluated. This report describes research conducted by the Pacific Northwest National Laboratory (PNNL) that evaluated relationships among river discharge, hyporheic zone characteristics, and egg pocket water temperature in Snake River fall Chinook salmon spawning areas. This was a pilot-scale study to evaluate these relationships under existing operations of Hells Canyon Dam (i.e., without any prescribed manipulations of river discharge) during the 2002-2003 water year. The project was initiated in the context of examining the potential for improving juvenile Snake River fall Chinook salmon survival by modifying the discharge operations of Hells Canyon Dam. The potential for improved survival would be gained by increasing the rate at which early life history events proceed (i.e., incubation and emergence), thereby allowing smolts to migrate through downstream reservoirs during early- to mid-summer when river conditions are more favorable for survival. PNNL implemented this research project at index sites throughout 160 km of the Hells Canyon Reach (HCR) of the Snake River. The HCR extends from Hells Canyon Dam (river kilometer [rkm] 399

  2. Numerical Study of Electric Field Enhanced Combustion

    KAUST Repository

    Han, Jie

    2016-12-26

    Electric fields can be used to change and control flame properties, for example changing flame speed, enhancing flame stability, or reducing pollutant emission. The ions generated in flames are believed to play the primary role. Although experiments have been carried out to study electric field enhanced combustion, they are not sufficient to explain how the ions in a flame are affected by an electric field. It is therefore necessary to investigate the problem through numerical simulations. In the present work, the electric structure of stabilized CH4/air premixed flames at atmospheric pressure within a direct current field is studied using numerical simulations. This study consists of three parts. First, the transport equations are derived from the Boltzmann kinetic equation for each individual species. Second, a general method for computing the diffusivity and mobility of ions in a gas mixture is introduced. Third, the mechanisms for neutral and charged species are improved to give better predictions of the concentrations of charged species, based on experimental data. Following from this, comprehensive numerical results are presented, including the concentrations and fluxes of charged species, the distributions of the electric field and electric potential, and the electric current-voltage relation. Two new concepts introduced with the numerical results are the plasma sheath and dead zone in the premixed flame. A reactive plasma sheath and a Boltzmann relation sheath are discovered in the region near the electrodes. The plasma sheath penetrates into the flame gas when a voltage is applied, and penetrating further if the voltage is higher. The zone outside the region of sheath penetration is defined as the dead zone. With the two concepts, analytical solutions for the electric field, electric potential and current-voltage curve are derived. The solutions directly describe the electric structure of a premixed flame subject to a DC field. These analytical solutions

  3. Exoskeleton for Soldier Enhancement Systems Feasibility Study

    Energy Technology Data Exchange (ETDEWEB)

    Jansen, J.F.

    2000-09-28

    The development of a successful exoskeleton for human performance augmentation (EHPA) will require a multi-disciplinary systems approach based upon sound biomechanics, power generation and actuation systems, controls technology, and operator interfaces. The ability to integrate key components into a system that enhances performance without impeding operator mobility is essential. The purpose of this study and report are to address the issue of feasibility of building a fieldable EHPA. Previous efforts, while demonstrating progress and enhancing knowledge, have not approached the level required for a fully functional, fieldable system. It is doubtless that the technologies required for a successful exoskeleton have advanced, and some of them significantly. The question to be addressed in this report is have they advanced to the point of making a system feasible in the next three to five years? In this study, the key technologies required to successfully build an exoskeleton have been examined. The primary focus has been on the key technologies of power sources, actuators, and controls. Power sources, including internal combustion engines, fuel cells, batteries, super capacitors, and hybrid sources have been investigated and compared with respect to the exoskeleton application. Both conventional and non-conventional actuator technologies that could impact EHPA have been assessed. In addition to the current state of the art of actuators, the potential for near-term improvements using non-conventional actuators has also been addressed. Controls strategies, and their implication to the design approach, and the exoskeleton to soldier interface have also been investigated. In addition to these key subsystems and technologies, this report addresses technical concepts and issues relating to an integrated design. A recommended approach, based on the results of the study is also presented.

  4. Stock Identification of Columbia River Chinook Salmon and Steelhead Trout, 1986 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Schreck, Carl B.; Li, Hiran W.; Hjort, Randy C.

    1986-08-01

    For the first time genetic similarities among chinook salmon and among steelhead trout stocks of the Columbia River were determined using a holistic approach including analysis of life history, biochemical, body shape and meristic characters. We examined between year differences for each of the stock characteristics and we also correlated the habitat characteristics with the wild stock characteristics. The most important principle for managing stocks of Columbia River chinook salmon and steelhead trout is that geographically proximal stocks tend to be like each other. Run timing and similarity of the stream systems should be taken into account when managing stocks. There are similarities in the classifications derived for chinook salmon and steelhead trout. Steelhead trout or chinook salmon tend to be genetically similar to other steelhead or chinook stocks, respectively, that originate from natal streams that are geographically close, regardless of time of freshwater entry. The primary exception Lo this trend is between stocks of spring and fall chinook in the upper Columbia River where fish with the different run timings are dissimilar, though geographically proximate stocks within a run form are generally very similar. Spring chinook stocks have stronger affinities to other spring chinook stocks that originate in the same side of the Cascade Range than to these Spring chinook stock: spawned on the other side of the Cascade Range. Spring chinook from west of the Cascades are more closely related to fall chinook than they are to spring chinook from east of the Cascades. Summer chinook can be divided into two main groups: (1) populations in the upper Columbia River that smolt as subyearlings and fall chinook stocks; and (2) summer chinook stocks from the Salmon River, Idaho, which smolt as yearlings and are similar to spring chinook stocks from Idaho. Fall chinook appear to comprise one large diverse group that is not easily subdivided into smaller subgroups. In

  5. A dense linkage map for Chinook salmon (Oncorhynchus tshawytscha) reveals variable chromosomal divergence after an ancestral whole genome duplication event.

    Science.gov (United States)

    Brieuc, Marine S O; Waters, Charles D; Seeb, James E; Naish, Kerry A

    2014-03-20

    Comparisons between the genomes of salmon species reveal that they underwent extensive chromosomal rearrangements following whole genome duplication that occurred in their lineage 58-63 million years ago. Extant salmonids are diploid, but occasional pairing between homeologous chromosomes exists in males. The consequences of re-diploidization can be characterized by mapping the position of duplicated loci in such species. Linkage maps are also a valuable tool for genome-wide applications such as genome-wide association studies, quantitative trait loci mapping or genome scans. Here, we investigated chromosomal evolution in Chinook salmon (Oncorhynchus tshawytscha) after genome duplication by mapping 7146 restriction-site associated DNA loci in gynogenetic haploid, gynogenetic diploid, and diploid crosses. In the process, we developed a reference database of restriction-site associated DNA loci for Chinook salmon comprising 48528 non-duplicated loci and 6409 known duplicated loci, which will facilitate locus identification and data sharing. We created a very dense linkage map anchored to all 34 chromosomes for the species, and all arms were identified through centromere mapping. The map positions of 799 duplicated loci revealed that homeologous pairs have diverged at different rates following whole genome duplication, and that degree of differentiation along arms was variable. Many of the homeologous pairs with high numbers of duplicated markers appear conserved with other salmon species, suggesting that retention of conserved homeologous pairing in some arms preceded species divergence. As chromosome arms are highly conserved across species, the major resources developed for Chinook salmon in this study are also relevant for other related species.

  6. Effects of Handling and Crowding on the Stress Response and Viability of Chinook Salmon Parr and Smolts, 1984 Completion Report.

    Energy Technology Data Exchange (ETDEWEB)

    Congleton, James L.

    1985-02-01

    Transportation of migrating chinook salmon smolts from Snake River dams to the Columbia River estuary has not reversed a downward trend in Idaho stocks of this species that first became apparent in the late 1960s. Poor survival of transported smolts may be a consequence of physiological responses to stressful events during collection and transportation. This study was undertaken to evaluate the intensity of stress responses in transported smolts, to determine if stress responses decrease the viability of transported smolts, and to investigate ways of avoiding or mitigating stressful events during transportation. 34 refs., 58 figs., 13 tabs.

  7. Chinook Salmon Adult Abundance Monitoring in Lake Creek, Idaho, 2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Faurot, Dave; Kucera, Paul

    2003-11-01

    Underwater time- lapse video technology has been used to monitor adult spring and summer chinook salmon (Oncorhynchus tshawytscha) escapement into the Secesh River and Lake Creek, Idaho, since 1998. Underwater time-lapse videography is a passive methodology that does not trap or handle this Endangered Species Act listed species. Secesh River chinook salmon represent a wild spawning aggregate that has not been directly supplemented with hatchery fish. The Secesh River is also a control stream under the Idaho Salmon Supplementation study. This project has successfully demonstrated the application of underwater video monitoring to accurately quantify chinook salmon abundance in Lake Creek in 1998, 1999, 2001 and 2002. The adult salmon spawner escapement into Lake Creek in 2002 was 410 fish. Jack salmon comprised 7.1 percent of the run. Estimated hatchery composition was 6.1 percent of the spawning run. The first fish passage on Lake Creek was recorded on June 26, 15 days after installation of the fish counting station. Peak net upstream movement of 41 adults occurred on July 8. Peak of total movement activity was August 18. The last fish passed through the Lake Creek fish counting station on September 2. Snow pack in the drainage was 91% of the average during the winter of 2001/2002. Video determined salmon spawner abundance was compared to redd count expansion method point estimates in Lake Creek in 2002. Expanded index area redd count and extensive area redd count point estimates in 2002, estimated from one percent fewer to 56 percent greater number of spawners than underwater video determined spawner abundance. Redd count expansion methods varied from two percent fewer to 55 percent greater in 2001, 11 to 46 percent fewer in 1999 and 104 to 214 percent greater in 1998. Redd count expansion values had unknown variation associated with the point estimates. Fish per redd numbers determined by video abundance and multiple pass redd counts of the larger extensive survey

  8. Hydraulic Characteristics of the Lower Snake River During Periods of Juvenile Fall Chinook Migration

    Energy Technology Data Exchange (ETDEWEB)

    Cook, Chris B.; Dibrani, Berhon; Richmond, Marshall C.; Bleich, Matthew D.; Titzler, P. Scott; Fu, Tao

    2006-01-30

    This report documents a four-year study to assess hydraulic conditions in the lower Snake River. The work was conducted for the Bonneville Power Administration, U.S. Department of Energy, by the Pacific Northwest National Laboratory. Cold water released from the Dworshak Reservoir hypolimnion during mid- to late-summer months cools the Clearwater River far below equilibrium temperature. The volume of released cold water augments the Clearwater River, and the combined total discharge is on the order of the Snake River discharge when the two rivers meet at their confluence near the upstream edge of Lower Granite Reservoir. With typical temperature differences between the Clearwater and Snake rivers of 10°C or more during July and August, the density difference between the two rivers during summer flow augmentation periods is sufficient to stratify Lower Granite Reservoir as well as the other three reservoirs downstream. Because cooling of the river is desirable for migrating juvenile fall Chinook salmon (Oncorhynchus tshawytscha) during this same time period, the amount of mixing and cold water entrained into Lower Granite Reservoir’s epilimnion at the Clearwater/Snake River confluence is of key biological importance to juvenile fall Chinook salmon. Data collected during this project indicates the three reservoirs downstream of Lower Granite also stratify as direct result of flow augmentation from Dworshak Reservoir. These four lower Snake reservoirs are also heavily influenced by wind forcing at the water’s surface, and during periods of low river discharge, often behave like a two-layer lake. During these periods of stratification, lower river discharge, and wind forcing, the water in the upper layer of the reservoir is held in place or moves slightly upstream. This upper layer is also exposed to surface heating and may warm up to temperatures close to equilibrium temperature. The depth of this upper warm layer and its direction of travel may also be of key

  9. Productivity of Spring Chinook Salmon and Summer Steelhead in the John Day River Basin, 2008 Annual Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Wilson, Wayne H.; Schricker, Jaym' e; Ruzychi, James R. (Oregon Department of Fish and Wildlife)

    2009-02-13

    The John Day River subbasin supports one of the last remaining intact wild populations of spring Chinook salmon and summer steelhead in the Columbia River Basin. These populations remain depressed relative to historic levels and limited information is available for steelhead life history. Numerous habitat protection and rehabilitation projects have been implemented in the basin to improve salmonid freshwater production and survival. However, these projects often lack effectiveness monitoring. While our monitoring efforts outlined here will not specifically measure the effectiveness of any particular project, they will provide much needed programmatic or watershed (status and trend) information to help evaluate project-specific effectiveness monitoring efforts as well as meet some data needs as index stocks. Our continued monitoring efforts to estimate salmonid smolt abundance, age structure, SAR, smolts/redd, freshwater habitat use, and distribution of critical life states will enable managers to assess the long-term effectiveness of habitat projects and to differentiate freshwater and ocean survival. Because Columbia Basin managers have identified the John Day subbasin spring Chinook population as an index population for assessing the effects of alternative future management actions on salmon stocks in the Columbia Basin (Schaller et al. 1999) we continue our ongoing studies. This project is high priority based on the level of emphasis by the NWPPC Fish and Wildlife Program, Independent Scientific Advisory Board (ISAB), Independent Scientific Review Panel (ISRP), NOAA National Marine Fisheries Service (NMFS), and the Oregon Plan for Salmon and Watersheds (OWEB). Each of these groups have placed priority on monitoring and evaluation to provide the real-time data to guide restoration and adaptive management in the region. The objective is to estimate smolt-to-adult survival rates (SAR) and out-migrant abundance for spring Chinook Oncorhynchus tshawytscha and summer

  10. Evaluation of the Contribution of Fall Chinook Salmon Reared at Columbia River Hatcheries to the Pacific Salmon Fisheries, 1989 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Vreeland, Robert R.

    1989-10-01

    In 1979 this study was initiated to determine the distribution, contribution, and value of artificially propagated fall chinook salmon from the Columbia River. Coded wire tagging (CWT) of hatchery fall chinook salmon began in 1979 with the 1978 brood and was completed in 1982 with the 1981 brood of fish at rearing facilities on the Columbia River system. From 18 to 20 rearing facilities were involved in the study each brood year. Nearly 14 million tagged fish, about 4% of the production, were released as part of this study over the four years, 1979 through 1982. Sampling for recoveries of these tagged fish occurred from 1980 through 1986 in the sport and commercial marine fisheries from Alaska through California, Columbia River fisheries, and returns to hatcheries and adjacent streams. The National Marine Fisheries Service coordinated this study among three fishery agencies: US Fish and Wildfire Service, Oregon Department of Fish and Wildlife, and Washington Department of Fisheries. The objectives of this study were to determine the distribution, fishery contribution, survival, and value of the production of fall chinook salmon from each rearing facility on the Columbia River system to Pacific coast salmon fisheries. To achieve these objectives fish from each hatchery were given a distinctive CWT. 81 refs., 20 figs., 68 tabs.

  11. Recent studies of transform image enhancement

    Science.gov (United States)

    Aghagolzadeh, Sabzali; Ersoy, Okan K.

    1992-06-01

    Blockwise transform image enhancement techniques are discussed. It is shown that the best transforms for transform image coding, namely, the scrambled real discrete Fourier transform, the discrete cosine transform, and the discrete cosine-III transform, are also the best for image enhancement. Three techniques of enhancement discussed in detail are alpha- rooting, modified unsharp masking, and filtering motivated by the human visual system response (HVS). With proper modifications, it is observed that unsharp masking and HVS- motivated filtering without nonlinearities are basically equivalent. Block effects are completely removed by using an overlap-save technique in addition to the best transform.

  12. AFCI Safeguards Enhancement Study: Technology Development Roadmap

    Energy Technology Data Exchange (ETDEWEB)

    Smith, Leon E.; Dougan, A.; Tobin, Stephen; Cipiti, B.; Ehinger, Michael H.; Bakel, A. J.; Bean, Robert; Grate, Jay W.; Santi, P.; Bryan, Steven; Kinlaw, M. T.; Schwantes, Jon M.; Burr, Tom; Lehn, Scott A.; Tolk, K.; Chichester, David; Menlove, H.; Vo, D.; Duckworth, Douglas C.; Merkle, P.; Wang, T. F.; Duran, F.; Nakae, L.; Warren, Glen A.; Friedrich, S.; Rabin, M.

    2008-12-31

    The Advanced Fuel Cycle Initiative (AFCI) Safeguards Campaign aims to develop safeguards technologies and processes that will significantly reduce the risk of proliferation in the U.S. nuclear fuel cycle of tomorrow. The Safeguards Enhancement Study was chartered with identifying promising research and development (R&D) directions over timescales both near-term and long-term, and under safeguards oversight both domestic and international. This technology development roadmap documents recognized gaps and needs in the safeguarding of nuclear fuel cycles, and outlines corresponding performance targets for each of those needs. Drawing on the collective expertise of technologists and user-representatives, a list of over 30 technologies that have the potential to meet those needs was developed, along with brief summaries of each candidate technology. Each summary describes the potential impact of that technology, key research questions to be addressed, and prospective development milestones that could lead to a definitive viability or performance assessment. Important programmatic linkages between U.S. agencies and offices are also described, reflecting the emergence of several safeguards R&D programs in the U.S. and the reinvigoration of nuclear fuel cycles across the globe.

  13. PIT Tag data - Monitoring the migrations of wild Snake River spring/summer Chinook salmon juveniles

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is an ongoing Bonneville Power Administration funded project to annually collect, PIT tag, and release wild Chinook salmon parr in up to 17 streams of the...

  14. Water Quality - Monitoring the migrations of wild Snake River spring/summer Chinook salmon juveniles

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is an ongoing Bonneville Power Administration funded project to annually collect, PIT tag, and release wild Chinook salmon parr in up to 17 streams of the...

  15. AFSC/REFM: Amendment 91 Chinook Salmon Economic Data Report Dataset

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Annual series of economic data collected for years 2012 and forward for the Amendment 91 (A91) Chinook Salmon Economic Data Report (EDR). Reporting is required of...

  16. AFSC/ABL: Stock composition, timing, and spawning distribution of Yukon River Chinook salmon

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Radio telemetry was used to determine the distribution, locate spawning sites, and evaluate the tagging response of wild Chinook salmon Oncorhynchus tshawytscha...

  17. Survival of Hatchery Subyearling Fall Chinook Salmon in the Free-Flowing Snake River and Lower Snake River Reservoirs, 1998-2001 Summary Report.

    Energy Technology Data Exchange (ETDEWEB)

    Smith, Steven G.; Muir, William D. (National Marine Fisheries Service, Seattle, WA)

    2002-09-01

    We report results from four years (1998-2001) of an ongoing study of survival and travel time of subyearling fall chinook salmon in the Snake River. We report analyses of associations among river conditions and survival and travel time estimates, which include data from 1995 through 1997. At weekly intervals from early June to early July each year (mid-May to late June in 2001), hatchery-reared subyearling fall chinook salmon were PIT tagged at Lyons Ferry Hatchery, trucked upstream, acclimated, and released above Lower Granite Dam at Pittsburgh Landing and Billy Creek on the Snake River and at Big Canyon Creek on the Clearwater River. Each year, a small proportion of fish released were not detected until the following spring. However, the number that overwintered in the river and migrated seaward as yearlings the following spring was small and had minimal effect on survival estimates. Concurrent with our studies, a number of subyearling fall chinook salmon that reared naturally in the Snake River were caught by beach seine, PIT tagged, and released. We compared a number of characteristics of hatchery and wild fish. Hatchery and wild fish were similar in 2001, and from 1995 through 1997. Results for 1998 through 2000 showed some relatively large differences between hatchery and wild fish. However, recent information suggests that a considerable proportion of wild subyearling chinook salmon migrating in a given year may actually be stream-type (spring/summer), rather than ocean-type (fall) fish, which may account for some of the differences we have observed.

  18. ENHANCEMENTS TO NATURAL ATTENUATION: SELECTED CASE STUDIES

    Energy Technology Data Exchange (ETDEWEB)

    Vangelas, K; W. H. Albright, W; E. S. Becvar, E; C. H. Benson, C; T. O. Early, T; E. Hood, E; P. M. Jardine, P; M. Lorah, M; E. Majche, E; D. Major, D; W. J. Waugh, W; G. Wein, G; O. R. West, O

    2007-05-15

    In 2003 the US Department of Energy (DOE) embarked on a project to explore an innovative approach to remediation of subsurface contaminant plumes that focused on introducing mechanisms for augmenting natural attenuation to achieve site closure. Termed enhanced attenuation (EA), this approach has drawn its inspiration from the concept of monitored natural attenuation (MNA).

  19. Testing for genetic differences in survival and growth between hatchery and wild Chinook salmon from Warm Springs River, Oregon (Study sites: Warm Springs Hatchery and Little White Salmon River; Stocks: Warm Springs hatchery and Warm Springs River wild; Year classes: 1992 and 1996): Chapter 8

    Science.gov (United States)

    Rubin, Stephen P.; Reisenbichler, Reginald R.; Wetzel, Lisa A.; Leonetti,; Rubin, Stephen P.; Reisenbichler, Reginald R.; Wetzel, Lisa A.; Hayes, Michael C.

    2012-01-01

    The program at Warm Springs National Fish Hatchery in north - central Oregon was initiated with spring Chinook salmon Oncorhynchus tshawytscha from the Warm Springs River. Managers included wild fish in the broodstock most years and avoided artificial selection to minimize genetic divergence from the wild founder population. We tested for genetic differences in survival and growth between the hatchery and wild populations to ascertain whether this goal has been achieved. Progeny of hatchery x hatchery (HH), hatchery female x wild male (HW), and wild x wild (WW) crosses were genetically marked at the sSOD - 1* allozyme locus and released together as unfed fry in hatchery ponds in 1992 and 1996 and in the Little White Salmon River, in south - central Washington, in 1996. Fish were evaluated to returning adult at the hatchery and over their freshwater residence of 16 months in the stream. The three crosses differed on several measures including survival to outmigration in the stream (WW>HH>HW) and juvenile growth in the hatchery (1992 year - class; WW>HW>HH); however, results may have been confounded. The genetic marks were found to differentially effect survival in a companion study (HH mark favored over WW mark; HW mark intermediate). Furthermore, HW survival in the current study was neither intermediate, as would be expect ed from additive genetic effects, nor similar to that of HH fish as would be expected from maternal effects since HW and HH fish were maternal half - siblings. Finally, the unexpected performance of HW fish precludes ruling out maternal differences between hatchery and wild mothers as the cause of differences between HH and WW fish. The key finding that survival of HH fish in a stream was 0.91 that for WW fish, indicating a small loss of fitness for natural rearing in the hatchery population, is valid only if three conditions hold: (1) any selection on the genetic marks was in the same direction as in the companion study, (2) lower survival in

  20. Stock Identification of Columbia River Chinook Salmon and Steelhead Trout, 1984-1985 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Schreck, Carl B.; Sharpe, Cameron; Li, Hiram W. (Oregon State University, Oregon Cooperative Fishery Research Unit, Corvallis, OR)

    1985-09-21

    Fish were collected from 60 stocks of chinook salmon and 62 stocks of steelhead trout. Electrophoretic analyses were completed on 43 stocks of chinook salmon and 41 stocks of steelhead trout and meristic counts were completed on 43 stocks of chinook and 41 stocks of steelhead. Statistical comparisons between year classes of our electrophoretic data indicate that most enzyme systems are stable over time but some may be dynamic and should be used with caution in our analyses. We also compared neighboring stocks of both spring chinook and steelhead trout. These comparisons were between stocks of the same race from adjacent stream systems and/or hatcheries. Differences in isozyme gene frequencies can be used to estimate genetic segregation between pairs of stocks. Analysis of the chinook data suggests that, as expected, the number of statistically significant differences in isozyme gene frequencies increases as the geographic distance between stocks increases. The results from comparisons between adjacent steelhead stocks were inconclusive and must await final analysis with more data. Cluster analyses using either isozyme gene frequencies or meristic characters both tended to group the chinook and steelhead stocks by geographic areas and by race and both methods resulted in generally similar grouping patterns. However, cluster analyses using isozyme gene frequencies produced more clusters than the analyses using meristic characters probably because of the greater number of electrophoretic characters compared to the number of meristic characters. Heterozygosity values for each stock were computed using the isozyme gene frequencies. The highest heterozygosity values for chinook were observed in summer chinook and the hatchery stocks while the lowest values were observed in the spring chinook and wild stocks. The results of comparisons of heterozygosity values among areas were inconclusive. The steelhead heterozygosity values were higher in the winter stocks than in the

  1. Idaho Supplementation Studies : 1993 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Leitzinger, Eric J.; Plaster, Kurtis; Hassemer, Peter

    1996-12-01

    Idaho Supplementation Studies (ISS) will help determine the utility of supplementation as a potential recovery tool for decimated stocks of spring and summer chinook salmon, Oncorhynchus tshawytscha, in Idaho as part of a program to protect, mitigate, and enhance fish and wildlife affected by the development and operation of hydroelectric power plants on the Columbia River. The objectives are to: (1) monitor and evaluate the effects of supplementation on presmolt and smolt numbers and spawning escapements of naturally produced salmon; (2) monitor and evaluate changes in natural productivity and genetic composition of target and adjacent populations following supplementation; and (3) determine which supplementation strategies provide the quickest and highest response in natural production without adverse effects on productivity. Field work began in 1991 with the collection of baseline data from treatment and some control streams. Full implementation began in 1992 with baseline data collection on treatment and control streams and releases of supplementation fish into several treatment streams. Field methods included snorkeling to estimate chinook salmon parr populations, PIT tagging summer parr to estimate parr-to-smolt survival, multiple redd counts to estimate spawning escapement and collect carcass information. Screw traps were used to trap and PIT tag outmigrating chinook salmon during the spring and fall outmigration. Weirs were used to trap and enumerate returning adult salmon in select drainages.

  2. Impact of stressors on transmission potential of Renibacterium salmoninarum in Chinook salmon

    Science.gov (United States)

    Purcell, Maureen K.; Winton, James R.

    2014-01-01

    Renibacterium salmoninarum is the causative agent of bacterial kidney disease (BKD) affecting several species of Pacific salmon.  The severity of BKD can range from a chronic infection to overt disease with high mortality as in the case of large losses of adult Chinook salmon (Oncorhynchus tshawytscha) in the Great Lakes during late 1980s. The goal of this study was to empirically evaluate how environmental stressors relevant to the Great Lakes impact R. salmoninarum disease progression and bacterial shedding, the latter parameter being a proxy of horizontal transmission. In the first study (Aim 1), we focused on how endogenous host thiamine levels and dietary fatty acids impacted resistance of Chinook salmon to R. salmoninarum. Juvenile fish were fed one of four experimental diets, including a (1) thiamine replete diet formulated with fish oil, (2) thiamine deplete diet formulated with fish oil, (3) thiamine replete diet formulated with soybean oil, and (4) thiamine deplete diet formulated with soybean oil, before being challenged with buffer or R. salmoninarum. We observed significantly higher mortality in the R. salmoninarum infected groups relative to the corresponding mock controls in only the thiamine replete diet groups. We also observed a significant effect of time and diet on kidney bacterial load and bacterial shedding, with a significant trend towards higher shedding and bacterial load in the fish oil – thiamine replete diet group. However, during the course of the study, unexpected mortality occurred in all groups attributed to the myxozoan parasite Ceratomyxa shasta. Since the fish were dually-infected with C. shasta, we evaluated parasite DNA levels (parasitic load) in the kidney of sampled fish. We found that parasite load varied across time points but there was no significant effect of diet. However, parasite load did differ significantly between the mock and R. salmoninarum challenge groups with a trend towards longer persistence of C. shasta

  3. Identification of Enhancers In Human: Advances In Computational Studies

    KAUST Repository

    Kleftogiannis, Dimitrios A.

    2016-03-24

    Roughly ~50% of the human genome, contains noncoding sequences serving as regulatory elements responsible for the diverse gene expression of the cells in the body. One very well studied category of regulatory elements is the category of enhancers. Enhancers increase the transcriptional output in cells through chromatin remodeling or recruitment of complexes of binding proteins. Identification of enhancer using computational techniques is an interesting area of research and up to now several approaches have been proposed. However, the current state-of-the-art methods face limitations since the function of enhancers is clarified, but their mechanism of function is not well understood. This PhD thesis presents a bioinformatics/computer science study that focuses on the problem of identifying enhancers in different human cells using computational techniques. The dissertation is decomposed into four main tasks that we present in different chapters. First, since many of the enhancer’s functions are not well understood, we study the basic biological models by which enhancers trigger transcriptional functions and we survey comprehensively over 30 bioinformatics approaches for identifying enhancers. Next, we elaborate more on the availability of enhancer data as produced by different enhancer identification methods and experimental procedures. In particular, we analyze advantages and disadvantages of existing solutions and we report obstacles that require further consideration. To mitigate these problems we developed the Database of Integrated Human Enhancers (DENdb), a centralized online repository that archives enhancer data from 16 ENCODE cell-lines. The integrated enhancer data are also combined with many other experimental data that can be used to interpret the enhancers content and generate a novel enhancer annotation that complements the existing integrative annotation proposed by the ENCODE consortium. Next, we propose the first deep-learning computational

  4. Contrast-enhanced ultrasound study of primary hepatic angiosarcoma: A pitfall of non-enhancement

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Liang, E-mail: liangw_1983@yahoo.com.cn [Department of Ultrasound, Chinese Academy of Medical Sciences and Peking Union Medical College Hospital, 1 Shuaifuyuan Wangfujing, Beijing 100730 (China); Lv, Ke, E-mail: lvke@163.com [Department of Ultrasound, Chinese Academy of Medical Sciences and Peking Union Medical College Hospital, 1 Shuaifuyuan Wangfujing, Beijing 100730 (China); Chang, Xiao-Yan, E-mail: changxiaoyan@hotmail.com [Department of Ultrasound, Chinese Academy of Medical Sciences and Peking Union Medical College Hospital, 1 Shuaifuyuan Wangfujing, Beijing 100730 (China); Xia, Yu, E-mail: yuxiapumch@yahoo.com.cn [Department of Ultrasound, Chinese Academy of Medical Sciences and Peking Union Medical College Hospital, 1 Shuaifuyuan Wangfujing, Beijing 100730 (China); Yang, Zhi-Ying, E-mail: yangzhy@yahoo.com.cn [Department of Ultrasound, Chinese Academy of Medical Sciences and Peking Union Medical College Hospital, 1 Shuaifuyuan Wangfujing, Beijing 100730 (China); Jiang, Yu-Xin, E-mail: jiangyx@pumch.ac.cn [Department of Ultrasound, Chinese Academy of Medical Sciences and Peking Union Medical College Hospital, 1 Shuaifuyuan Wangfujing, Beijing 100730 (China); Dai, Qing, E-mail: qingdai_2000@yahoo.com [Department of Ultrasound, Chinese Academy of Medical Sciences and Peking Union Medical College Hospital, 1 Shuaifuyuan Wangfujing, Beijing 100730 (China); Tan, Li, E-mail: tanlixg@163.com [Department of Ultrasound, Chinese Academy of Medical Sciences and Peking Union Medical College Hospital, 1 Shuaifuyuan Wangfujing, Beijing 100730 (China); Li, Jian-Chu, E-mail: jianchu.li@163.com [Department of Ultrasound, Chinese Academy of Medical Sciences and Peking Union Medical College Hospital, 1 Shuaifuyuan Wangfujing, Beijing 100730 (China)

    2012-09-15

    Highlights: ► The contrast-enhanced ultrasound (CEUS) characteristics of primary hepatic angiosarcoma (PHA) in three patients were retrospectively analyzed. ► PHA appeared similar peripheral enhancement pattern in our series. ► Non-necrotic tumor tissue of PHA unexpectedly demonstrated non-enhancement on CEUS. ► It may be associated with the very low velocity of blood flow in the central region of tumors. ► This interesting finding warrants further investigations, particularly on intratumoral hemodynamics. -- Abstract: Objective: To investigate the contrast-enhanced ultrasound (CEUS) characteristics of primary hepatic angiosarcoma (PHA). Methods: The sonographic findings and CEUS images of PHA in three patients were retrospectively analyzed. Results: In our study, 3 cases of PHA (2 multiple nodules and 1 solitary mass) showed similar enhancement pattern on CEUS, characterized by remarkable central non-enhancement and peripheral irregular enhancement in the arterial and portal phase, and complete wash-out in the late phase. Furthermore, we unexpectedly found that abundant neoplastic tissues were present in the central area of non-enhancement on pathological evaluation. Based on literature review, we supposed that the unusual finding may be associated with the very low velocity of blood flow in the central region of tumors. Conclusion: CEUS could well depict PHA with some common features, which may provide valuable clues in diagnosis of this rare disease. And non-necrotic tumor tissue of PHA could also demonstrate non-enhancement on CEUS, which warrant further investigations.

  5. Northeast Oregon Hatchery Spring Chinook Master Plan, Technical Report 2000.

    Energy Technology Data Exchange (ETDEWEB)

    Ashe, Becky L.; Concannon, Kathleen; Johnson, David B.

    2000-04-01

    Spring chinook salmon populations in the Imnaha and Grande Ronde rivers are listed as threatened under the Endangered Species Act (ESA) and are at high risk of extirpation. The Nez Perce Tribe, the Confederated Tribes of the Umatilla Indian Reservation, and Oregon Department of Fish and Wildlife, are co-managers of conservation/restoration programs for Imnaha and Grande Ronde spring chinook salmon that use hatchery supplementation and conventional and captive broodstock techniques. The immediate goal of these programs is to prevent extirpation and provide the potential for restoration once factors limiting production are addressed. These programs redirect production occurring under the Lower Snake River Compensation Plan (LSRCP) from mitigation to conservation and restoration. Both the Imnaha and Grande Ronde conservation/restoration programs are described in ESA Section 10 permit applications and the co-managers refer to the fish production from these programs as the Currently Permitted Program (CPP). Recently, co-managers have determined that it is impossible to produce the CPP at Lookingglass Hatchery, the LSRCP facility intended for production, and that without additional facilities, production must be cut from these conservation programs. Development of new facilities for these programs through the Columbia Basin Fish and Wildlife Program is considered a new production initiative by the Northwest Power Planning Council (NPPC) and requires a master plan. The master plan provides the NPPC, program proponents and others with the information they need to make sound decisions about whether the proposed facilities to restore salmon populations should move forward to design. This master plan describes alternatives considered to meet the facility needs of the CPP so the conservation program can be fully implemented. Co-managers considered three alternatives: modify Lookingglass Hatchery; use existing facilities elsewhere in the Basin; and use new facilities in

  6. 78 FR 5162 - Designation of a Nonessential Experimental Population of Central Valley Spring-Run Chinook Salmon...

    Science.gov (United States)

    2013-01-24

    ... Experimental Population of Central Valley Spring-Run Chinook Salmon Below Friant Dam in the San Joaquin River..., published a proposed rule to designate a nonessential experimental population of Central Valley spring-run... population of Central Valley spring-run Chinook salmon under section 10(j) of the Endangered Species Act...

  7. Cryopreservation of Adult Male Spring and Summer Chinook Salmon Gametes in the Snake River Basin, 1997 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Faurot, Dave; Kucera, Paul A.; Armstrong, Robyn D. (Nez Perce Tribe, Lapwai, ID)

    1998-06-01

    Chinook salmon populations in the Northwest are decreasing in number. The Nez Perce Tribe was funded in 1997 by the Bonneville Power Administration to coordinate and initiate gene banking of adult male gametes from Endangered Species Act (ESA) listed spring and summer chinook salmon in the Snake River basin.

  8. 76 FR 42099 - Fisheries of the Exclusive Economic Zone Off Alaska; Chinook Salmon Bycatch Management in the...

    Science.gov (United States)

    2011-07-18

    ... caught during this period. A historic high of approximately 122,000 Chinook salmon were taken in the... cost of harvesting pollock; and Reduction of the annual bycatch of Chinook salmon. Current Data for..., along with other existing data (e.g., catch accounting and observer data) provide useful information...

  9. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin, Volume I; Assessment of Temporal Trends in Daily Survival Estimates of Spring Chinook, 1994-1996 Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Skalski, John R.; Perez-Comas, Jose A.; Lady, Jim

    1998-10-01

    This report if the first of a series of reports produced by the University of Washington for the Bonneville Power Administration under the title ''The Design and Analysis of Salmonid Tagging Studies in the Columbia Basin'', with the purpose of offering new and alternative methods to analyzing data from tagging studies in the Columbia Basin.

  10. Salmon Supplementation Studies in Idaho Rivers (Idaho Supplementation Studies) : Experimental Design, 1991 Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Bowles, Edward C.; Leitzinger, Eric J.

    1991-12-01

    The purpose of this study is to help determine the utility of supplementation as a potential recovery tool for decimated stocks of spring and summer chinook salmon in Idaho. The goals are to assess the use of hatchery chinook to restore or augment natural populations, and to evaluate the effects of supplementation on the survival and fitness of existing natural populations.

  11. Escapement and Productivity of Spring Chinook Salmon and Summer Steelhead in the John Day River Basin, 2005-2006 Annual Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Schultz, Terra Lang; Wilson, Wayne H.; Ruzycki, James R. [Oregon Department of Fish and Wildlife

    2009-04-10

    The objectives are: (1) Estimate number and distribution of spring Chinook salmon Oncorhynchus tshawytscha redds and spawners in the John Day River subbasin; and (2) Estimate smolt-to-adult survival rates (SAR) and out-migrant abundance for spring Chinook and summer steelhead O. mykiss and life history characteristics of summer steelhead. The John Day River subbasin supports one of the last remaining intact wild populations of spring Chinook salmon and summer steelhead in the Columbia River Basin. These populations, however, remain depressed relative to historic levels. Between the completion of the life history and natural escapement study in 1984 and the start of this project in 1998, spring Chinook spawning surveys did not provide adequate information to assess age structure, progeny-to-parent production values, smolt-to-adult survival (SAR), or natural spawning escapement. Further, only very limited information is available for steelhead life history, escapement, and productivity measures in the John Day subbasin. Numerous habitat protection and rehabilitation projects to improve salmonid freshwater production and survival have also been implemented in the basin and are in need of effectiveness monitoring. While our monitoring efforts outlined here will not specifically measure the effectiveness of any particular project, they will provide much needed background information for developing context for project-specific effectiveness monitoring efforts. To meet the data needs as index stocks, to assess the long-term effectiveness of habitat projects, and to differentiate freshwater and ocean survival, sufficient annual estimates of spawner escapement, age structure, SAR, egg-to-smolt survival, smolt-per-redd ratio, and freshwater habitat use are essential. We have begun to meet this need through spawning ground surveys initiated for spring Chinook salmon in 1998 and smolt PIT-tagging efforts initiated in 1999. Additional sampling and analyses to meet these goals

  12. Grande Ronde Endemic Spring Chinook Project - ODFW, 2008 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Patterson, Scott

    2009-04-10

    Core activities of the Grande Ronde Endemic Spring Chinook Supplementation Program (GRESCSP) are funded through the authority of the Lower Snake River Fish and Wildlife Compensation Plan (LSRCP). The LSRCP program was approved by the Water Resources Development Act of 1976, PL 94-587, Section 102, 94th Congress substantially in accordance with the Special Report, LSRCP, June 1975 on file with the Chief of Engineers. The LSRCP was prepared and submitted in compliance with the Fish and Wildlife Coordination Act of 1958, PL 85-624, 85th Congress, August 12, 1958 to mitigate for the losses of fish and wildlife caused by the construction of dams on lower Snake River. The GRESCSP is an artificial propagation program that was initiated by Bonneville Power Administrations Fish and Wildlife program in the mid 1990's. The intent of this program was to change the mitigation aspect of the LSRCP program (harvest mitigation) to an integrated supplementation program; inasmuch as, hatchery produced fish could be experimentally used as a recovery tool and fish surplus to mitigation would be available for in-place and in-kind harvest. Fish production is still authorized by the LSRCP with the original mitigation return goal of 5,860 adult spring Chinook to the project area. The GRESCSP was developed with two primary components: (1) conventional broodstock (projects 199800702; 199800703; 199800704) and (2) captive brood (projects 199801001; 199801006). The GRESCSP relies on cooperative M&E efforts from the LSRCP including setting aside the Wenaha and Minam tributaries as natural production reserves components used for reference streams. The GRESCSP, coordinated with federal and tribal partners, identifies production levels for both propagation components and weir management strategies for each of the three supplemented tributary areas within the Grande Ronde Sub-basin. The three supplemented areas are Catherine Creek, Lostine River, and upper Grande Ronde River. Lookingglass

  13. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin, Volume VI; Assessment of Season-Wide Survival of Snake River Yearling Chinook Salmon, 1994-1996 Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Skalski, John R.; Perez-Comas, Jose A. (University of Washington, School of Fisheries, Fisheries Research Institute, Seattle, WA); Smith, Steven G. (National Marine Fisheries Service, Northwest Fisheries Science Center, Seattle, WA)

    1998-06-01

    Project 8910700, Epidemiological Survival Methods, was developed to provide statistical guidance on design and analysis of PIT-tag (Passive Integrated Transponder) survival studies to the Northwest fisheries community.

  14. Threshold for onset of injury in Chinook salmon from exposure to impulsive pile driving sounds.

    Science.gov (United States)

    Halvorsen, Michele B; Casper, Brandon M; Woodley, Christa M; Carlson, Thomas J; Popper, Arthur N

    2012-01-01

    The risk of effects to fishes and other aquatic life from impulsive sound produced by activities such as pile driving and seismic exploration is increasing throughout the world, particularly with the increased exploitation of oceans for energy production. At the same time, there are few data that provide insight into the effects of these sounds on fishes. The goal of this study was to provide quantitative data to define the levels of impulsive sound that could result in the onset of barotrauma to fish. A High Intensity Controlled Impedance Fluid filled wave Tube was developed that enabled laboratory simulation of high-energy impulsive sound that were characteristic of aquatic far-field, plane-wave acoustic conditions. The sounds used were based upon the impulsive sounds generated by an impact hammer striking a steel shell pile. Neutrally buoyant juvenile Chinook salmon (Oncorhynchus tshawytscha) were exposed to impulsive sounds and subsequently evaluated for barotrauma injuries. Observed injuries ranged from mild hematomas at the lowest sound exposure levels to organ hemorrhage at the highest sound exposure levels. Frequency of observed injuries were used to compute a biological response weighted index (RWI) to evaluate the physiological impact of injuries at the different exposure levels. As single strike and cumulative sound exposure levels (SEL(ss), SEL(cum) respectively) increased, RWI values increased. Based on the results, tissue damage associated with adverse physiological costs occurred when the RWI was greater than 2. In terms of sound exposure levels a RWI of 2 was achieved for 1920 strikes by 177 dB re 1 µPa(2)⋅s SEL(ss) yielding a SEL(cum) of 210 dB re 1 µPa(2)⋅s, and for 960 strikes by 180 dB re 1 µPa(2)⋅s SEL(ss) yielding a SEL(cum) of 210 dB re 1 µPa(2)⋅s. These metrics define thresholds for onset of injury in juvenile Chinook salmon.

  15. Threshold for onset of injury in Chinook salmon from exposure to impulsive pile driving sounds.

    Directory of Open Access Journals (Sweden)

    Michele B Halvorsen

    Full Text Available The risk of effects to fishes and other aquatic life from impulsive sound produced by activities such as pile driving and seismic exploration is increasing throughout the world, particularly with the increased exploitation of oceans for energy production. At the same time, there are few data that provide insight into the effects of these sounds on fishes. The goal of this study was to provide quantitative data to define the levels of impulsive sound that could result in the onset of barotrauma to fish. A High Intensity Controlled Impedance Fluid filled wave Tube was developed that enabled laboratory simulation of high-energy impulsive sound that were characteristic of aquatic far-field, plane-wave acoustic conditions. The sounds used were based upon the impulsive sounds generated by an impact hammer striking a steel shell pile. Neutrally buoyant juvenile Chinook salmon (Oncorhynchus tshawytscha were exposed to impulsive sounds and subsequently evaluated for barotrauma injuries. Observed injuries ranged from mild hematomas at the lowest sound exposure levels to organ hemorrhage at the highest sound exposure levels. Frequency of observed injuries were used to compute a biological response weighted index (RWI to evaluate the physiological impact of injuries at the different exposure levels. As single strike and cumulative sound exposure levels (SEL(ss, SEL(cum respectively increased, RWI values increased. Based on the results, tissue damage associated with adverse physiological costs occurred when the RWI was greater than 2. In terms of sound exposure levels a RWI of 2 was achieved for 1920 strikes by 177 dB re 1 µPa(2⋅s SEL(ss yielding a SEL(cum of 210 dB re 1 µPa(2⋅s, and for 960 strikes by 180 dB re 1 µPa(2⋅s SEL(ss yielding a SEL(cum of 210 dB re 1 µPa(2⋅s. These metrics define thresholds for onset of injury in juvenile Chinook salmon.

  16. Physiological Stress Responses to Prolonged Exposure to MS-222 and Surgical Implantation in Juvenile Chinook Salmon

    Energy Technology Data Exchange (ETDEWEB)

    Wagner, Katie A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Woodley, Christa M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Seaburg, Adam [Univ. of Washington, Seattle, WA (United States); Skalski, John R. [Univ. of Washington, Seattle, WA (United States); Eppard, Matthew B. [U.S. Army Corps of Engineers, Portland, OR (United States)

    2014-07-17

    While many studies have investigated the effects of transmitters on fish condition, behavior, and survival, to our knowledge, no studies have taken into account anesthetic exposure time in addition to tag and surgery effects. We investigated stress responses to prolonged MS-222 exposure after stage 4 induction in surgically implanted juvenile Chinook salmon (Oncorhynchus tshawytscha). Survival, tag loss, plasma cortisol concentration, and blood Na+, K+, Ca2+, and pH were measured immediately following anesthetic exposure and surgical implantation and 1, 7, and 14 days post-treatment. Despite the prolonged anesthetic exposure, 3-15 minutes post Stage 4 induction, there were no mortalities or tag loss in any treatment. MS-222 was effective at delaying immediate cortisol release during surgical implantation; however, osmotic disturbances resulted, which were more pronounced in longer anesthetic time exposures. From day 1 to day 14, Na+, Ca2+, and pH significantly decreased, while cortisol significantly increased. The cortisol increase was exacerbated by surgical implantation. There was a significant interaction between MS-222 time exposure and observation day for Na+, Ca2+, K+, and pH; variations were seen in the longer time exposures, although not consistently. In conclusion, stress response patterns suggest stress associated with surgical implantation is amplified with increased exposure to MS-222.

  17. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at John Day Dam, Spring 2010

    Energy Technology Data Exchange (ETDEWEB)

    Weiland, Mark A.; Ploskey, Gene R.; Hughes, James S.; Woodley, Christa M.; Deng, Zhiqun; Carlson, Thomas J.; Skalski, J. R.; Townsend, Richard L.

    2012-11-15

    The purpose of this study was to compare dam passage survival, at two spill treatment levels, of yearling Chinook salmon and steelhead smolts at John Day Dam during spring 2010. The two treatments were 30% and 40% spill out of total project discharge. Under the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp), dam passage survival should be greater than or equal to 0.96 and estimated with a standard error (SE) less than or equal 0.015. The study also estimated forebay residence time, tailrace egress time, and spill passage efficiency (SPE), as required in the Columbia Basin Fish Accords. However, by agreement among the stakeholders, this study was not an official BiOp compliance test because the long-term passage measures at John Day Dam have yet to be finalized and another year of spill-treatment testing was desired.

  18. Additive and non-additive genetic components of the jack male life history in Chinook salmon (Oncorhynchus tshawytscha).

    Science.gov (United States)

    Forest, Adriana R; Semeniuk, Christina A D; Heath, Daniel D; Pitcher, Trevor E

    2016-08-01

    Chinook salmon, Oncorhynchus tshawytscha, exhibit alternative reproductive tactics (ARTs) where males exist in two phenotypes: large "hooknose" males and smaller "jacks" that reach sexual maturity after only 1 year in seawater. The mechanisms that determine "jacking rate"-the rate at which males precociously sexually mature-are known to involve both genetics and differential growth rates, where individuals that become jacks exhibit higher growth earlier in life. The additive genetic components have been studied and it is known that jack sires produce significantly more jack offspring than hooknose sires, and vice versa. The current study was the first to investigate both additive and non-additive genetic components underlying jacking through the use of a full-factorial breeding design using all hooknose sires. The effect of dams and sires descendant from a marker-assisted broodstock program that identified "high performance" and "low performance" lines using growth- and survival-related gene markers was also studied. Finally, the relative growth of jack, hooknose, and female offspring was examined. No significant dam, sire, or interaction effects were observed in this study, and the maternal, additive, and non-additive components underlying jacking were small. Differences in jacking rates in this study were determined by dam performance line, where dams that originated from the low performance line produced significantly more jacks. Jack offspring in this study had a significantly larger body size than both hooknose males and females starting 1 year post-fertilization. This study provides novel information regarding the genetic architecture underlying ARTs in Chinook salmon that could have implications for the aquaculture industry, where jacks are not favoured due to their small body size and poor flesh quality.

  19. The cerebral intravascular enhancement sign is not specific: a contrast-enhanced MRI study

    Energy Technology Data Exchange (ETDEWEB)

    Bakshi, R.; Kinkel, W.R.; Bates, V.E.; Mechtler, L.L.; Kinkel, P.R. [Lucy Dent Imaging Center, University at Buffalo, NY (United States)

    1999-02-01

    The intravascular enhancement (IVE) sign, also known as the ``arterial enhancement sign``, is an abnormal finding in the brain on contrast-enhanced MRI studies. IVE has been described in arterial cerebrovascular disorders, most commonly in acute or subacute arterial ischemic infarcts. However, the specificity of this sign has not been established. We describe four patients with disorders other than arterial strokes in whom gadolinium-enhanced high-field (1.5 T) MRI suggested IVE. The conditions were herpes simplex viral encephalitis, idiopathic cerebellitis, pneumococcal meningitis, and superior sagittal sinus thrombosis with venous infarction. IVE in these cases may be due to multiple factors, including arterial, venous, perivascular, and leptomeningeal or sulcal contrast medium accumulation. Our observations suggest that arterial ischemia, previously described as the cardinal cause of IVE, probably does not explain all instances, and urge caution in interpreting this sign as a specific MRI manifestation of acute arterial infarction or ischemia. (orig.) With 4 figs., 1 tab., 44 refs.

  20. Migratory Behavior of Adult Spring Chinook Salmon in the Willamette River and its Tributaries: Completion report

    Energy Technology Data Exchange (ETDEWEB)

    Schreck, Carl B.

    1994-01-01

    Migration patterns of adult spring chinook salmon above Willamette Falls differed depending on when the fish passed the Falls, with considerable among-fish variability. Early-run fish often terminated their migration for extended periods of time, in association with increased flows and decreased temperatures. Mid-run fish tended to migrate steadily upstream at a rate of 30-40 km/day. Late-run fish frequently ceased migrating or fell back downstream after migrating 10-200 km up the Willamette River or its tributaries; this appeared to be associated with warming water during summer and resulted in considerable mortality. Up to 40% of the adult salmon entering the Willamette River System above Willamette Falls (i.e. counted at the ladder) may die before reaching upriver spawning areas. Up to 10% of the fish passing up over Willamette Falls may fall-back below the Falls; some migrate to the Columbia River or lower Willamette River tributaries. If rearing conditions at hatcheries affect timing of adult returns because of different juvenile development rates and improper timing of smolt releases, then differential mortality in the freshwater segment of the adult migrations may confound interpretation of studies evaluating rearing practices.

  1. Spring Chinook Salmon Oncorhynchus tshawytscha Supplementation in the Clearwater Subbasin ; Nez Perce Tribal Hatchery Monitoring and Evaluation Project, 2007 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Backman, Thomas; Sprague, Sherman; Bretz, Justin [Nez Perce Tribe

    2009-06-10

    The Nez Perce Tribal Hatchery (NPTH) program has the following goals (BPA, et al., 1997): (1) Protect, mitigate, and enhance Clearwater Subbasin anadromous fish resources; (2) Develop, reintroduce, and increase natural spawning populations of salmon within the Clearwater Subbasin; (3) Provide long-term harvest opportunities for Tribal and non-Tribal anglers within Nez Perce Treaty lands within four generations (20 years) following project initiation; (4) Sustain long-term fitness and genetic integrity of targeted fish populations; (5) Keep ecological and genetic impacts to non-target populations within acceptable limits; and (6) Promote Nez Perce Tribal management of Nez Perce Tribal Hatchery Facilities and production areas within Nez Perce Treaty lands. The NPTH program was designed to rear and release 1.4 million fall and 625,000 spring Chinook salmon. Construction of the central incubation and rearing facility NPTH and spring Chinook salmon acclimation facilities were completed in 2003 and the first full term NPTH releases occurred in 2004 (Brood Year 03). Monitoring and evaluation plans (Steward, 1996; Hesse and Cramer, 2000) were established to determine whether the Nez Perce Tribal Hatchery program is achieving its stated goals. The monitoring and evaluation action plan identifies the need for annual data collection and annual reporting. In addition, recurring 5-year program reviews will evaluate emerging trends and aid in the determination of the effectiveness of the NPTH program with recommendations to improve the program's implementation. This report covers the Migratory Year (MY) 2007 period of the NPTH Monitoring & Evaluation (M&E) program. There are three NPTH spring Chinook salmon treatment streams: Lolo Creek, Newsome Creek, and Meadow Creek. In 2007, Lolo Creek received 140,284 Brood Year (BY) 2006 acclimated pre-smolts at an average weight of 34.9 grams per fish, Newsome Creek received 77,317 BY 2006 acclimated pre-smolts at an average of 24

  2. Behavior, passage, and downstream migration of juvenile Chinook salmon from Detroit Reservoir to Portland, Oregon, 2014–15

    Science.gov (United States)

    Kock, Tobias J.; Beeman, John W.; Hansen, Amy C.; Hansel, Hal C.; Hansen, Gabriel S.; Hatton, Tyson W.; Kofoot, Eric E.; Sholtis, Matthew D.; Sprando, Jamie M.

    2015-11-16

    An evaluation was conducted to estimate dam passage survival of juvenile Chinook salmon (Oncorhynchus tshawytscha) at Detroit Dam during a period of spill. To estimate dam passage survival, we used a paired-release recapture study design and released groups of tagged fish upstream (997 fish) and downstream (625 fish) of Detroit Dam. A total of 43 fish (6.8 percent) passed Detroit Dam from the upstream release group and passage occurred through regulating outlets (54.8 percent), spill bays (31.0 percent), and turbines (14.3 percent). We do not present dam passage survival estimates from 2014 because these estimates would have been highly uncertain due to the low number of fish that passed Detroit Dam during the study. Secondary objectives were addressed using data collected from tagged fish that were released at the downstream release site.

  3. Using Online Case Studies to Enhance Teacher Preparation

    Science.gov (United States)

    Richman, Laila

    2015-01-01

    The purpose of this study was to assess the impact interactive, online case studies have on learning for preservice teachers. More specifically, it evaluated whether the use of online case studies in instruction could enhance the level of knowledge the preservice teacher gained from the content material. This study utilized a nonequivalent group,…

  4. A Study of Digital Image Enlargement and Enhancement

    Directory of Open Access Journals (Sweden)

    Hsueh-Yi Lin

    2014-01-01

    Full Text Available Most image enlargement techniques suffer the problem of zigzagged edges and jagged images following enlargement. Humans are sensitive to the edges of objects; if the edges in the image are sharp, the visual is considered to be high quality. To solve this problem, this paper presents a new and effective method for image enlargement and enhancement based on adaptive inverse hyperbolic tangent (AIHT algorithm. Conventional image enlargement and enhancement methods enlarge the image using interpolation, and subsequently enhance the image without considering image features. However, this study presents the method based on Adaptive Inverse Hyperbolic Tangent algorithm to enhance images according to image features before enlarging the image. Experimental results indicate that the proposed algorithm is capable of adaptively enhancing the image and extruding object details, thereby improving enlargements by smoothing the edge of the objects in the image.

  5. Effects of Hyporheic Exchange Flows on Egg Pocket Water Temperature in Snake River Fall Chinook Salmon Spawning Areas, 2002-2003 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hanrahan, T.; Geist, D.; Arntzen, C. (Pacific Northwest National Laboratory)

    2004-09-01

    The development of the Snake River hydroelectric system has affected fall Chinook salmon smolts by shifting their migration timing to a period (mid- to late-summer) when downstream reservoir conditions are unfavorable for survival. Subsequent to the Snake River Chinook salmon fall-run Evolutionary Significant Unit being listed as Threatened under the Endangered Species Act, recovery planning has included changes in hydrosystem operations (e.g., summer flow augmentation) to improve water temperature and flow conditions during the juvenile Chinook salmon summer migration period. In light of the limited water supplies from the Dworshak reservoir for summer flow augmentation, and the associated uncertainties regarding benefits to migrating fall Chinook salmon smolts, additional approaches for improved smolt survival need to be evaluated. This report describes research conducted by the Pacific Northwest National Laboratory (PNNL) that evaluated relationships among river discharge, hyporheic zone characteristics, and egg pocket water temperature in Snake River fall Chinook salmon spawning areas. This was a pilot-scale study to evaluate these relationships under existing operations of Hells Canyon Dam (i.e., without any prescribed manipulations of river discharge) during the 2002-2003 water year. The project was initiated in the context of examining the potential for improving juvenile Snake River fall Chinook salmon survival by modifying the discharge operations of Hells Canyon Dam. The potential for improved survival would be gained by increasing the rate at which early life history events proceed (i.e., incubation and emergence), thereby allowing smolts to migrate through downstream reservoirs during early- to mid-summer when river conditions are more favorable for survival. PNNL implemented this research project at index sites throughout 160 km of the Hells Canyon Reach (HCR) of the Snake River. The HCR extends from Hells Canyon Dam (river kilometer [rkm] 399

  6. Comparing the survival rate of juvenile Chinook salmon migrating through hydropower systems using injectable and surgical acoustic transmitters

    Energy Technology Data Exchange (ETDEWEB)

    Deng, Z. D.; Martinez, J. J.; Li, H.; Harnish, R. A.; Woodley, C. M.; Hughes, J. A.; Li, X.; Fu, T.; Lu, J.; McMichael, G. A.; Weiland, M. A.; Eppard, M. B.; Skalski, J. R.; Townsend, R. L.

    2017-02-21

    Acoustic telemetry is one of the primary technologies for studying the behavior and survival of fishes throughout the world. The size and performance of the transmitters is still the key limiting factor despite that considerable effort has been expended to understand the biological effects of implantation of acoustic transmitters in yearling and subyearling Chinook salmon. The newly developed injectable transmitter is the first active acoustic tag that can be implanted via injection instead of surgery. It also lasts more than four times longer than the commercially-available transmitters. A two-part field study was conducted to evaluate the performance of the injectable transmitter and its effect on the survival of implanted fish. The injectable transmitter performed well and similarly to the other commercially-available transmitters tested. Snake River subyearling Chinook salmon smolts implanted with the injectable tag had a higher survival probability from release to each of 11 downstream detection arrays than concurrent releases of fish surgically implanted with commercially-available tags. In addition, reach-specific survival estimates were significantly higher for the injectable group in three of the eleven reaches examined. Overall, the injectable group had a 0.263 (SE = 0.017) survival probability over the entire 500 km study area compared to 0.199 (0.012) for the surgically implanted group. The differences in survival may have been caused by warm water temperatures and higher rates of infection experienced by the surgically implanted group due to the presence of sutures acting as an attachment site for pathogens. The reduction in size and ability to implant the new transmitter via injection has further reduced the tag or tagging effect bias associated with studying small fishes. The information gathered with this new technology is helping minimize the impact of dams on fish, leading to more environmentally sustainable energy systems.

  7. Monitoring the Migrations of Wild Snake River Spring/Summer Chinook Salmon Juveniles, 2003-2004 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Achord, Stephen; Hodge, Jacob M.; Sandford, Benjamin P.

    2005-06-01

    This report provides information on PIT-tagging of wild Chinook salmon parr in Idaho in 2003 and the subsequent monitoring of these fish and similarly tagged fish from Oregon. We report estimated parr-to-smolt survival and arrival timing of these fish at Lower Granite Dam, as well as interrogation data collected at several other sites throughout the Snake and Columbia River system. This research continues studies that began under Bonneville Power Administration (BPA) funding in 1991. Results from previous study years were reported by Achord et al. (1994; 1995a,b; 1996a; 1997; 1998; 2000; 2001a,b; 2002, 2003, 2004). Goals of this ongoing study are: (1) Characterize the migration timing and estimate parr-to-smolt survival of different stocks of wild Snake River spring/summer Chinook salmon smolts at Lower Granite Dam. (2) Determine whether consistent migration patterns are apparent. (3) Determine what environmental factors influence migration patterns. (4) Characterize the migration behavior and estimate survival of different wild juvenile fish stocks as they emigrate from their natal rearing areas. This study provides critical information for recovery planning, and ultimately recovery for these ESA-listed wild fish stocks. In 2003-2004, we also continued to measure water temperature, dissolved oxygen, specific conductance, turbidity, water depth, and pH at five monitoring stations in the Salmon River Basin, Idaho for the Baseline Environmental Monitoring Program. These data, along with parr/smolt migration, survival, and timing data, will help to discern patterns or characteristic relationships between fish movement/survival and environmental factors.

  8. Post-Release Attributes and Survival of Hatchery and Natural Fall Chinook Salmon in the Snake River : Annual Report 1999.

    Energy Technology Data Exchange (ETDEWEB)

    Tiffan, Kenneth F.; Rondorf, Dennis W.

    2001-01-01

    This report summarizes results of research activities conducted in 1999 and years previous. In an effort to provide this information to a wider audience, the individual chapters in this report have been submitted as manuscripts to peer-reviewed journals. These chapters communicate significant findings that will aid in the management and recovery of fall chinook salmon in the Columbia River Basin. Abundance and timing of seaward migration of Snake River fall chinook salmon was indexed using passage data collected at Lower Granite Dam for five years. We used genetic analyses to determine the lineage of fish recaptured at Lower Granite Dam that had been previously PIT tagged. We then used discriminant analysis to determine run membership of PIT-tagged smolts that were not recaptured to enable us to calculate annual run composition and to compared early life history attributes of wild subyearling fall and spring chinook salmon. Because spring chinook salmon made up from 15.1 to 44.4% of the tagged subyearling smolts that were detected passing Lower Granite Dam, subyearling passage data at Lower Granite Dam can only be used to index fall chinook salmon smolt abundance and passage timing if genetic samples are taken to identify run membership of smolts. Otherwise, fall chinook salmon smolt abundance would be overestimated and timing of fall chinook salmon smolt passage would appear to be earlier and more protracted than is the case.

  9. Seasonal use of shallow water habitat in the Lower Snake River reservoirs by juvenile fall Chinook salmon

    Science.gov (United States)

    Tiffan, Kenneth F.; Connor, William P.

    2012-01-01

    The U.S. Army Corps of Engineers (COE) is preparing a long term management plan for sediments that affect the authorized project purposes of the Lower Granite, Little Goose, Lower Monumental, and Ice Harbor reservoirs (hereafter, the lower Snake River reservoirs), and the area from the mouth of the Snake River to Ice Harbor Dam. We conducted a study from spring 2010 through winter 2011 to describe the habitat use by juvenile Chinook salmon within a selected group of shallow water habitat complexes (areas increased. Reservoir-type juveniles (or fish likely destined to become reservoir-type juveniles) were present in the lower Snake River reservoirs from fall 2010 through winter 2011; however, use of shallow water habitat by reservoir-type juveniles was limited during our study. We only collected 38 reservoir-type juveniles in shallow water habitat sites in beach and lampara seines during the fall. Radiotelemetry data revealed that though many tagged fish passed shallow water habitat sites, relatively few fish entered them and the median time fish spent within a given site was less than 1.4 h. Fish located by mobile tracking away from study sites were pelagically oriented, and generally not found over shallow water or close to shore. The findings in this report: (1) support the selection of natural fall Chinook subyearlings as the indicator group for determining the potential benefits of using dredge spoils to create shallow water habitat, (2) provide evidence for shallow water habitat use by natural subyearlings, (3) provide evidence against large-scale use of shallow water habitat by reservoir-type juveniles, (4) suggest that the depth criterion for defining shallow water habitat (i.e., competition would help to better inform the long-term management plan.

  10. Northeast Oregon Hatchery Spring Chinook Master Plan, Technical Report 2000.

    Energy Technology Data Exchange (ETDEWEB)

    Ashe, Becky L.; Concannon, Kathleen; Johnson, David B.

    2000-04-01

    Spring chinook salmon populations in the Imnaha and Grande Ronde rivers are listed as threatened under the Endangered Species Act (ESA) and are at high risk of extirpation. The Nez Perce Tribe, the Confederated Tribes of the Umatilla Indian Reservation, and Oregon Department of Fish and Wildlife, are co-managers of conservation/restoration programs for Imnaha and Grande Ronde spring chinook salmon that use hatchery supplementation and conventional and captive broodstock techniques. The immediate goal of these programs is to prevent extirpation and provide the potential for restoration once factors limiting production are addressed. These programs redirect production occurring under the Lower Snake River Compensation Plan (LSRCP) from mitigation to conservation and restoration. Both the Imnaha and Grande Ronde conservation/restoration programs are described in ESA Section 10 permit applications and the co-managers refer to the fish production from these programs as the Currently Permitted Program (CPP). Recently, co-managers have determined that it is impossible to produce the CPP at Lookingglass Hatchery, the LSRCP facility intended for production, and that without additional facilities, production must be cut from these conservation programs. Development of new facilities for these programs through the Columbia Basin Fish and Wildlife Program is considered a new production initiative by the Northwest Power Planning Council (NPPC) and requires a master plan. The master plan provides the NPPC, program proponents and others with the information they need to make sound decisions about whether the proposed facilities to restore salmon populations should move forward to design. This master plan describes alternatives considered to meet the facility needs of the CPP so the conservation program can be fully implemented. Co-managers considered three alternatives: modify Lookingglass Hatchery; use existing facilities elsewhere in the Basin; and use new facilities in

  11. Defenses of Susceptible and Resistant Chinook Salmon (Onchorhynchus tshawytscha) Against the Myxozoan Parasite Ceratomyxa shasta

    Science.gov (United States)

    Bjork, Sarah J.; Zhang, Yong-An; Hurst, Charlene N.; Alonso-Naveiro, Maria E.; Alexander, Julie D.; Sunyer, J. Oriol; Bartholomew, Jerri L.

    2014-01-01

    We investigated intra-specific variation in the response of salmon to infection with the myxozoan Ceratomyxa shasta by comparing the progress of parasite infection and measures of host immune response in susceptible and resistant Chinook salmon Oncorhynchus tshawytscha at days 12, 25 and 90 post exposure. There were no differences in invasion of the gills indicating that resistance does not occur at the site of entry. In the intestine on day 12, infection intensity and Ig+ cell numbers were higher in susceptible than resistant fish, but histological examination that timepoint showed more severe inflammation in resistant fish This suggests a role for the immune response in resistant fish that eliminates some parasites prior to or soon after reaching the intestine. Susceptible fish had a higher IFNγ, IL-6 and IL-10 response at day 12, but all died fatal enteronecrosis by day 25. The greatest fold change in IFNγ expression was detected at day 25 in resistant Chinook. In addition, the number of Ig+ cells in resistant Chinook also increased by day 25. By day 90, resistant Chinook had resolved the inflammation, cytokine expression had decreased and Ig+ cell numbers were similar to uninfected controls. Thus, it appears that the susceptible strain was incapable of containing or eliminating C. shasta but resistant fish: 1) reduced infection intensity during early intestinal infection 2) elicited an effective inflammatory response in the intestine that eliminated C. shasta 3) resolved the inflammation and recovered from infection. PMID:24412163

  12. Migratory Characteristics of Juvenile Spring Chinook Salmon in the Willamette River : Completion Report 1994.

    Energy Technology Data Exchange (ETDEWEB)

    Schreck, Carl B.; Snelling, J.C.; Ewing, R.E.; Bradford, C.S.; Davis, L.E.; Slater, C.H.

    1994-01-01

    The objective of this research was to examine in detail the migration of juvenile spring chinook salmon (Oncorhynchus tshawytscha) in the Willamette River, Oregon. The authors wanted to determine characteristics of seaward migration of spring chinook smolts in relation to the oxygen supplementation practices at the Oregon Department of Fish and Wildlife (ODFW) Willamette Hatchery and use this information to strengthen the design of the oxygen supplementation project. There is little information available on the effects of oxygen supplementation at hatcheries on the migratory characteristics of juvenile salmon. Such information is required to assess the use of oxygen supplementation as a means of improving hatchery production, its effect on imprinting of juveniles, and finally the return of adults. In the event that oxygen supplementation provides for improved production and survival of juvenile chinook salmon at Willamette Hatchery, background information on the migration characteristics of these fish will be required to effectively utilize the increased production within the goals of the Willamette Fish Management Plan. Furthermore this technology may be instrumental in the goal of doubling the runs of spring Chinook salmon in the Columbia River. While evaluation of success is dependent on evaluation of the return of adults with coded wire tags, examination of the migratory characteristics of hatchery smolts may prove to be equally informative. Through this research it is possible to determine the rate at which individuals from various oxygenation treatment groups leave the Willamette River system, a factor which may be strongly related to adult return rate.

  13. Physicochemical Characteristics of the Hyporheic Zone Affect Redd Site Selection of Chum and Fall Chinook Salmon, Columbia River.

    Energy Technology Data Exchange (ETDEWEB)

    Geist, David R.

    2001-10-01

    Chum salmon (Oncorhynchus keta) may historically have been the most abundant species of Columbia River salmon, contributing as much as 50% of the total biomass of all salmon in the Pacific Ocean prior to the 1940's (Neave 1961). By the 1950's, however, run sizes to the Columbia River dropped dramatically and in 1999 the National Marine Fisheries Service (NMFS) listed Columbia River chum salmon as threatened under the Endangered Species Act (ESA; NMFS 1999). Habitat degradation, water diversions, harvest, and artificial propagation are the major human-induced factors that have contributed to the species decline (NMFS 1998). Columbia River chum salmon spawn exclusively in the lower river below Bonneville Dam, including an area near Ives Island. The Ives Island chum salmon are part of the Columbia River evolutionary significant unit (ESU) for this species, and are included in the ESA listing. In addition to chum salmon, fall chinook salmon (O. tshawytscha) also spawn at Ives Island. Spawning surveys conducted at Ives Island over the last several years show that chum and fall chinook salmon spawned in clusters in different locations (US Fish and Wildlife Service and Washington Department of Fish and Wildlife, unpublished data). The presence of redd clusters suggested that fish were selecting specific habitat features within the study area (Geist and Dauble 1998). Understanding the specific features of these spawning areas is needed to quantify the amount of habitat available to each species so that minimum flows can be set to protect fish and maintain high quality habitat.

  14. Wildfire may increase habitat quality for spring Chinook salmon in the Wenatchee River subbasin, WA, USA

    Science.gov (United States)

    Flitcroft, Rebecca L; Falke, Jeffrey A.; Reeves, Gordon H.; Hessburg, Paul F.; McNyset, Kris M.; Benda, Lee E.

    2016-01-01

    Pacific Northwest salmonids are adapted to natural disturbance regimes that create dynamic habitat patterns over space and through time. However, human land use, particularly long-term fire suppression, has altered the intensity and frequency of wildfire in forested upland and riparian areas. To examine the potential impacts of wildfire on aquatic systems, we developed stream-reach-scale models of freshwater habitat for three life stages (adult, egg/fry, and juvenile) of spring Chinook salmon (Oncorhynchus tshawytscha) in the Wenatchee River subbasin, Washington. We used variables representing pre- and post-fire habitat conditions and employed novel techniques to capture changes in in-stream fine sediment, wood, and water temperature. Watershed-scale comparisons of high-quality habitat for each life stage of spring Chinook salmon habitat suggested that there are smaller quantities of high-quality juvenile overwinter habitat as compared to habitat for other life stages. We found that wildfire has the potential to increase quality of adult and overwintering juvenile habitat through increased delivery of wood, while decreasing the quality of egg and fry habitat due to the introduction of fine sediments. Model results showed the largest effect of fire on habitat quality associated with the juvenile life stage, resulting in increases in high-quality habitat in all watersheds. Due to the limited availability of pre-fire high-quality juvenile habitat, and increased habitat quality for this life stage post-fire, occurrence of characteristic wildfires would likely create a positive effect on spring Chinook salmon habitat in the Wenatchee River subbasin. We also compared pre- and post-fire model results of freshwater habitat for each life stage, and for the geometric mean of habitat quality across all life stages, using current compared to the historic distribution of spring Chinook salmon. We found that spring Chinook salmon are currently distributed in stream channels in

  15. How Chairpersons Enhance Faculty Research: A Grounded Theory Study.

    Science.gov (United States)

    Creswell, John W.; Brown, Martha L.

    1992-01-01

    A study examined how department chairpersons enhanced research performance of college and university faculty. By applying grounded theory methods to a corpus of 33 interviews with chairpersons, the study resulted in a typology of chair roles (administrative, advocacy, interpersonal), then assessed the process of assistance for faculty at four…

  16. Using Clinical Gait Case Studies to Enhance Learning in Biomechanics

    Science.gov (United States)

    Chester, Victoria

    2011-01-01

    Clinical case studies facilitate the development of clinical reasoning strategies through knowledge and integration of the basic sciences. Case studies have been shown to be more effective in developing problem-solving abilities than the traditional lecture format. To enhance the learning experiences of students in biomechanics, clinical case…

  17. Sandy beach surf zones: An alternative nursery habitat for 0-age Chinook salmon

    Science.gov (United States)

    Marin Jarrin, J. R.; Miller, J. A.

    2013-12-01

    The role of each habitat fish use is of great importance to the dynamics of populations. During their early marine residence, Chinook salmon (Oncorhynchus tshawytscha), an anadromous fish species, mostly inhabit estuaries but also use sandy beach surf zones and the coastal ocean. However, the role of surf zones in the early life history of Chinook salmon is unclear. We hypothesized that surf zones serve as an alternative nursery habitat, defined as a habitat that consistently provides a proportion of a population with foraging and growth rates similar to those experienced in the primary nursery. First, we confirmed that juvenile Chinook salmon cohorts are simultaneously using both habitats by combining field collections with otolith chemical and structural analysis to directly compare size and migration patterns of juveniles collected in two Oregon (USA) estuaries and surf zones during three years. We then compared juvenile catch, diet and growth in estuaries and surf zones. Juveniles were consistently caught in both habitats throughout summer. Catches were significantly higher in estuaries (average ± SD = 34.3 ± 19.7 ind. 100 m-2) than surf zones (1.0 ± 1.5 ind. 100 m-2) and were positively correlated (r = 0.92). Size at capture (103 ± 15 mm fork length, FL), size at marine entry (76 ± 13 mm FL), stomach fullness (2 ± 2% body weight) and growth rates (0.4 ± 0.0 mm day-1) were similar between habitats. Our results suggest that when large numbers of 0-age Chinook salmon inhabit estuaries, juveniles concurrently use surf zones, which serve as an alternative nursery habitat. Therefore, surf zones expand the available rearing habitat for Chinook salmon during early marine residence, a critical period in the life history.

  18. Partial migration in introduced wild chinook salmon (Oncorhynchus tshawytscha) of southern Chile

    Science.gov (United States)

    Araya, Miguel; Niklitschek, Edwin J.; Secor, Dave H.; Piccoli, Philip M.

    2014-08-01

    Partial migration, the incidence of opposing migration behaviors within the same population, has been a key factor in the invasive ecology of Pacific salmon within South America. Here, we examined such life-cycle variation in of an introduced chinook salmon population in the Aysén watershed, one of the largest fjord systems in NW Patagonia. The chinook salmon is the most successful invasive salmonid species in Patagonia and has recently colonized numerous Patagonian watersheds of the Pacific and Atlantic Oceans. Using analyses of fish scales and otolith strontium:calcium ratios, our results suggest the presence of two distinct ecotypes in the chinook population, an ocean type and a stream type, in a 3:2 ratio. The distribution of back-calculated length at the time of emigration from river to marine habitats showed a mode of 14 cm for the ocean ecotype and 30 cm for the stream ecotype. River residence time for the ocean ecotype ranged from 1 to 10 months, while that of the stream ecotype varied between 14 and 20 months. Returning adults reproduced in riverine habitats between August and March, but reproduction by the stream ecotype was limited to the period between October and February. Our results show that exotic chinook salmon populations established in NW Patagonia present a diversity of life-history strategies, which seems to be as large as the ones exhibited by the species in its native distribution range and in other invaded ecosystems. Chinook salmon have successfully invaded most major rivers in Patagonia, placing priority on science and conservation related to their ecological impact.

  19. Post-Release Attributes and Survival of Hatchery and Natural Fall Chinook Salmon in the Snake River, Annual Report 1998.

    Energy Technology Data Exchange (ETDEWEB)

    Tiffan, Kenneth F.; Rondorf, Dennis W.; Connor, William P.; Burge, Howard L.

    1999-12-01

    This report summarizes results of research activities conducted primarily in 1997 and 1998. This report communicates significant findings that will aid in the management and recovery of fall chinook salmon in the Columbia River Basin.

  20. Determine movement patterns and survival rates of Central Valley Chinook salmon, steelhead and their predators using acoustic tags.

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The project’s objective is to document movement patterns and survival rates of Chinook salmon, steelhead, green sturgeon, and other fish from several sources in...

  1. Relationships Between Landscape Habitat Variables and Chinook Salmon Production in the Columbia River Basin, 1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Thompson, William L.; Lee, Danny C.

    1999-09-01

    This publication concerns the investigation of potential relationships between various landscape habitat variables and estimates of fish production from 25 index stocks of spring/summer chinook salmon with the Columbia River Basin.

  2. Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Knudsen, Curtis M. (Oncorh Consulting, Olympia, WA); Schroder, Steven L. (Washington Department of Fish and Wildlife, Olympia, WA); Johnston, Mark V. (yakama Nation, Toppenish, WA)

    2005-05-01

    This report is intended to satisfy two concurrent needs: (1) provide a contract deliverable from Oncorh Consulting to the Washington Department of Fish and Wildlife (WDFW), with emphasis on identification of salient results of value to ongoing Yakima/Klickitat Fisheries Project (YKFP) planning and (2) summarize results of research that have broader scientific relevance. This is the fourth in a series of reports that address reproductive ecological research and monitoring of spring chinook populations in the Yakima River basin. This annual report summarizes data collected between April 1, 2004 and March 31, 2005 and includes analyses of historical baseline data, as well. Supplementation success in the Yakima Klickitat Fishery Project's (YKFP) spring chinook (Oncorhynchus tshawytscha) program is defined as increasing natural production and harvest opportunities, while keeping adverse ecological interactions and genetic impacts within acceptable bounds (Busack et al. 1997). Within this context demographics, phenotypic traits, and reproductive ecology have significance because they directly affect natural productivity. In addition, significant changes in locally adapted traits due to hatchery influence, i.e. domestication, would likely be maladaptive resulting in reduced population productivity and fitness (Taylor 1991; Hard 1995). Thus, there is a need to study demographic and phenotypic traits in the YKFP in order to understand hatchery and wild population productivity, reproductive ecology, and the effects of domestication (Busack et al. 1997). Tracking trends in these traits over time is also a critical aspect of domestication monitoring (Busack et al. 2004) to determine whether trait changes have a genetic component and, if so, are they within acceptable limits. The first chapter of this report compares first generation hatchery and wild upper Yakima River spring chinook returns over a suite of life-history, phenotypic and demographic traits. The second

  3. Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Knudsen, Curtis M. (Oncorh Consulting, Olympia, WA)

    2003-05-01

    This report is intended to satisfy two concurrent needs: (1) provide a contract deliverable from Oncorh Consulting to the Washington Department of Fish and Wildlife (WDFW), with emphasis on identification of salient results of value to ongoing Yakima/Klickitat Fisheries Project (YKFP) planning, and (2) summarize results of research that have broader scientific relevance. This is the second in a series of reports that address reproductive ecological research and monitoring of spring chinook in the Yakima River basin. In addition to within-year comparisons, between-year comparisons will be made to determine if traits of the wild Naches basin control population, the naturally spawning population in the upper Yakima River and the hatchery control population are diverging over time. This annual report summarizes data collected between April 1, 2002 and March 31, 2003. In the future, these data will be compared to previous years to identify general trends and make preliminary comparisons. Supplementation success in the Yakima Klickitat Fishery Project's (YKFP) spring chinook (Oncorhynchus tshawytscha) program is defined as increasing natural production and harvest opportunities, while keeping adverse ecological interactions and genetic impacts within acceptable bounds (Busack et al. 1997). Within this context demographics, phenotypic traits, and reproductive ecology have significance because they directly affect natural productivity. In addition, significant changes in locally adapted traits due to hatchery influence, i.e. domestication, would likely be maladaptive resulting in reduced population productivity and fitness (Taylor 1991; Hard 1995). Thus, there is a need to study demographic and phenotypic traits in the YKFP in order to understand hatchery and wild population productivity, reproductive ecology, and the effects of domestication (Busack et al. 1997). Tracking trends in these traits over time is also a critical aspect of domestication monitoring (Busack

  4. Medial tibial pain: a dynamic contrast-enhanced MRI study.

    Science.gov (United States)

    Mattila, K T; Komu, M E; Dahlström, S; Koskinen, S K; Heikkilä, J

    1999-09-01

    The purpose of this study was to compare the sensitivity of different magnetic resonance imaging (MRI) sequences to depict periosteal edema in patients with medial tibial pain. Additionally, we evaluated the ability of dynamic contrast-enhanced imaging (DCES) to depict possible temporal alterations in muscular perfusion within compartments of the leg. Fifteen patients with medial tibial pain were examined with MRI. T1-, T2-weighted, proton density axial images and dynamic and static phase post-contrast images were compared in ability to depict periosteal edema. STIR was used in seven cases to depict bone marrow edema. Images were analyzed to detect signs of compartment edema. Region-of-interest measurements in compartments were performed during DCES and compared with controls. In detecting periosteal edema, post-contrast T1-weighted images were better than spin echo T2-weighted and proton density images or STIR images, but STIR depicted the bone marrow edema best. DCES best demonstrated the gradually enhancing periostitis. Four subjects with severe periosteal edema had visually detectable pathologic enhancement during DCES in the deep posterior compartment of the leg. Percentage enhancement in the deep posterior compartment of the leg was greater in patients than in controls. The fast enhancement phase in the deep posterior compartment began slightly slower in patients than in controls, but it continued longer. We believe that periosteal edema in bone stress reaction can cause impairment of venous flow in the deep posterior compartment. MRI can depict both these conditions. In patients with medial tibial pain, MR imaging protocol should include axial STIR images (to depict bone pathology) with T1-weighted axial pre and post-contrast images, and dynamic contrast enhanced imaging to show periosteal edema and abnormal contrast enhancement within a compartment.

  5. Expression of a novel piscine growth hormone gene results in growth enhancement in transgenic tilapia (Oreochromis niloticus).

    Science.gov (United States)

    Rahman, M A; Mak, R; Ayad, H; Smith, A; Maclean, N

    1998-09-01

    Several lines of transgenic G1 and G2 tilapia fish (Oreochromis niloticus) have been produced following egg injection with gene constructs carrying growth hormone coding sequences of fish origin. Using a construct in which an ocean pout antifreeze promoter drives a chinook salmon growth hormone gene, dramatic growth enhancement has been demonstrated, in which the mean weight of the 7 month old G2 transgenic fish is more than three fold that of their non transgenic siblings. Somewhat surprisingly G1 fish transgenic for a construct consisting of a sockeye salmon metallothionein promoter spliced to a sockeye salmon growth hormone gene exhibited no growth enhancement, although salmon transgenic for this construct do show greatly enhanced growth. The growth enhanced transgenic lines were also strongly positive in a radio-immuno assay for the specific hormone in their serum, whereas the non growth enhanced lines were negative. Attempts to induce expression from the metallothionein promoter by exposing fish to increased levels of zinc were also unsuccessful. Homozygous transgenic fish have been produced from the ocean pout antifreeze/chinook salmon GH construct and preliminary trials suggest that their growth performance is similar to that of the hemizygous transgenics. No abnormalities were apparent in the growth enhanced fish, although minor changes to skull shape and reduced fertility were noted in some fish. There is also preliminary evidence for improved food conversion ratios when growth enhanced transgenic tilapia are compared to their non-transgenic siblings. The long term objective of this study is to produce lines of tilapia which are both growth enhanced and sterile, so offering improved strains of this important food fish for aquaculture.

  6. Cost studies of thermally enhanced in situ soil remediation technologies

    Energy Technology Data Exchange (ETDEWEB)

    Bremser, J.; Booth, S.R.

    1996-05-01

    This report describes five thermally enhanced technologies that may be used to remediate contaminated soil and water resources. The standard methods of treating these contaminated areas are Soil Vapor Extraction (SVE), Excavate & Treat (E&T), and Pump & Treat (P&T). Depending on the conditions at a given site, one or more of these conventional alternatives may be employed; however, several new thermally enhanced technologies for soil decontamination are emerging. These technologies are still in demonstration programs which generally are showing great success at achieving the expected remediation results. The cost savings reported in this work assume that the technologies will ultimately perform as anticipated by their developers in a normal environmental restoration work environment. The five technologies analyzed in this report are Low Frequency Heating (LF or Ohmic, both 3 and 6 phase AC), Dynamic Underground Stripping (DUS), Radio Frequency Heating (RF), Radio Frequency Heating using Dipole Antennae (RFD), and Thermally Enhanced Vapor Extraction System (TEVES). In all of these technologies the introduction of heat to the formation raises vapor pressures accelerating contaminant evaporation rates and increases soil permeability raising diffusion rates of contaminants. The physical process enhancements resulting from temperature elevations permit a greater percentage of volatile organic compound (VOC) or semi- volatile organic compound (SVOC) contaminants to be driven out of the soils for treatment or capture in a much shorter time period. This report presents the results of cost-comparative studies between these new thermally enhanced technologies and the conventional technologies, as applied to five specific scenarios.

  7. Feeding bionomics of juvenile chinook salmon relative to thermal discharges in the central Columbia River

    Energy Technology Data Exchange (ETDEWEB)

    Becker, C.D.

    1994-10-01

    Juvenile chinook salmon (Oncorhynchus tshawytscha) in the Hanford environs of the central Columbia River, Washington consumed almost entirely adult and larval stages of aquatic insects. The food organisms were dominated by midges (Diptera: Tendipedidae); by numbers, adult midges provided 64 and 58% of the diet and larval midges 17 and 18% of the diet, in 1968 and 1969, respectively. The families Hydropsychidae (Trichoptera), Notonectidae (Hemiptera) and Hypogastruridae (Collembola) were of secondary importance. Small fry fed almost exclusively on the small tendipedids. Over 95% of all food organisms originated within the river ecosystem. The distinctive features of food and feeding activity were fourfold: first, relatively few insect groups were utilized; second, the fish depended on drifting, floating, or swimming organisms; third, they visually selected living prey moving in or on the water; and fourth, they were habitat opportunists to a high degree. The 1969 data, were studied to reveal possible thermal effects of heated discharges from plutonium production reactors at Hanford on food and growth parameters. All data were characterized by considerable variation between and within stations. No discernable effects between coldwater and warmwater stations were revealed by analyses of: (1) groups of food organisms utilized, (2) food and feeding activity, (3) numbers of insects consumed, (4) seasonal increases in fish length, (5) fish length-weight relationships, (6) fish coefficients of condition, and (7) stomach biomass. The lack of detectable thermal effects was apparently due to the fact that the main effluent plumes discharge in midstream and the effluents are well mixed before reaching inshore feeding areas. The transient nature of fish groups at each station, influenced by changes in regulated river flows, and the availability of food organisms in the river drift were ecological factors affecting critical thermal evaluation in situ.

  8. Pen Rearing and Imprinting of Fall Chinook Salmon, 1985 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Novotny, Jerry F.; Macy, Thomas L.; Gardenier, James T.

    1985-05-01

    Upriver bright fall chinook salmon (Oncorhynchus tshawytscha) are being reared in a backwater and a pond along John Day Reservoir to evaluate the benefits of rearing fish and releasing them off-station compared to traditional hatchery procedures. Fish reared in net pens at a density/feeding combination judged to be the economic optimum of those used during 1984 rearing trials exhibited good growth and smolt development. Size of fish averaged 112 fish/lb (4.0g/fish), ATPase activities ranged from 16.4 to 29.5 micromoles Pi/mg prot/hr at release and total mortality of fish was low among pens, ranging from 0.3 to 1.1%. Poor growth and smolt development was observed in fish reared in a large barrier net, especially during the initial two weeks after stocking. In addition, mortality of fish in the barrier net was high (49%) in relation to any of the other treatments tested thus far. The combined effects of generally poor condition of fish at stocking, low zooplankton densities during the initial two weeks of rearing, and losses to predation were thought to be the primary causes of the slow growth rates and high mortality. Unfed fish in pens utilized the available natural food base, but zooplankton densities were apparently not sufficient for growth, and may have been marginal for sustenance, especially at higher density. ATPase activities at release were significantly higher in low-density pens than in higher density pens, but development at all densities was retarded when compared with ATPase activities of fed fish. Preliminary cost estimates for producing fish-using the rearing strategies developed in the current pen-rearing study compared favorably with the average costs of rearing salmonids in a Northwest hatchery.

  9. Grande Ronde Endemic Spring Chinook Salmon Supplementation Project; Lostine River Operations and Maintenance 2003 Smolt Acclimation and Adult Return Report.

    Energy Technology Data Exchange (ETDEWEB)

    Zollman, Richard L.; Eschler, Russell; Sealey, Shawn [Nez Perce Tribe

    2009-03-31

    The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the seventh season (1997-2003) of adult Chinook salmon broodstock collection in the Lostine River and the fifth season (1999-2003) of acclimating the resultant progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progeny for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies. In 2003, acclimation of

  10. Grande Ronde Endemic Spring Chinook Salmon Supplementation Project; Lostine River Operations and Maintenance 2006 Smolt Acclimation and Adult Return Report.

    Energy Technology Data Exchange (ETDEWEB)

    Zollman, Richard L.; Eschler, Russell; Sealey, Shawn [Nez Perce Tribe

    2009-03-31

    The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the tenth season (1997-2006) of adult Chinook salmon broodstock collection in the Lostine River and the eighth season (1999-2006) of acclimation of resulting Lostine River progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progeny for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies In 2006

  11. Grande Ronde Endemic Spring Chinook Salmon Supplementation Project; Lostine River Operations and Maintenance 2004 Smolt Acclimation and Adult Return Report.

    Energy Technology Data Exchange (ETDEWEB)

    Zollman, Richard L.; Eschler, Russell; Sealey, Shawn [Nez Perce Tribe

    2009-03-31

    The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the eighth season (1997-2004) of adult Chinook salmon broodstock collection in the Lostine River and the sixth season (1999-2004) of acclimation of resulting Lostine River progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progency for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies. In 2004

  12. A study on enhancing policy transparency in the nuclear field

    Energy Technology Data Exchange (ETDEWEB)

    Cheon, S. W. [Korea Institute for National Unification, Seoul (Korea)

    2000-11-01

    Enhancing transparency in the nuclear field is a pending issue for the South Korea's nuclear community. International suspicions and mistrust of ROK's nuclear activities have been obstacles to the developments of South Korea's nuclear industry. South Korea's efforts have not been sufficient enough to ensure international community that its nuclear program will be used solely for peaceful purposes. Therefore, the purpose of this study is to conduct a positive and creative research on the issue of transparency and provide policy options that are conducive to developing of South Korea's nuclear industry. Based on an in-depth study on transparency of national policies, this study presents a package of detail policy measures that can contribute to enhancing transparency in the nuclear filed. 75 refs., 2 tabs. (Author)

  13. Ultrasonographic contrast-enhanced study of sicca syndrome

    Energy Technology Data Exchange (ETDEWEB)

    Giuseppetti, Gian Marco [Institute of Radiology, University School of Medicine, Umberto I Hospital, Via Conca 1, Ancona (Italy)]. E-mail: gm.giuseppetti@ao-umbertoprimo.marche.it; Argalia, Giulio [Institute of Radiology, University School of Medicine, Umberto I Hospital, Via Conca 1, Ancona (Italy); Salera, Diego [Institute of Radiology, University School of Medicine, Umberto I Hospital, Via Conca 1, Ancona (Italy); Ranaldi, Roberto [Institute of Pathological Anatomy and Histopathology, University School of Medicine, Umberto I Hospital, Ancona (Italy); Danieli, Giovanna [Institute of Internal Medicine, University School of Medicine, Umberto I Hospital, Ancona (Italy); Cappelli, Marida [Institute of Internal Medicine, University School of Medicine, Umberto I Hospital, Ancona (Italy)

    2005-05-01

    Objective: To assess the ability of US contrast-enhanced time-intensity curves to depict the changes connected with sicca syndrome, a fairly common condition that is often associated with autoimmune disorders such as Sjogren's syndrome or other diseases. Diagnostic criteria are complex and controversial and although no single test can be considered the gold standard, salivary gland scintigraphy and biopsy are reliable diagnostic methods. Materials and methods: Sixty consecutive patients with sicca syndrome, 40 of whom had primary (n = 23) or secondary (n = 17) Sjogren's syndrome and 20 had non-Sjogren's sicca syndrome, selected according to European Community Study Group diagnostic criteria for Sjogren's syndrome and subjected to contrast-enhanced US imaging of the parotids using a second-generation contrast agent with analysis of time-intensity curves at rest and during salivary stimulation, Tc99m salivary gland scintigraphy and labial gland biopsy. Results: In the 40 Sjogren's patients, US enhancement values were significantly lower (P < 0.0001 and P < 0.00003, respectively) than in the 20 non-Sjogren's patients both at rest and during stimulation. In the 23 subjects with the primary syndrome, values during stimulation were significantly lower than in the 17 subjects with the secondary syndrome (P < 0.0006), whereas at rest differences were not significant. Contrast-enhanced US imaging allowed to discriminate Sjogren's from non-Sjogren's sicca patients with 87.5% sensitivity, 85% specificity and 86.7% accuracy and the primary from the secondary syndrome with 78.2% sensitivity, 70.5% specificity and 75% accuracy. Interestingly, in eight patients with the primary syndrome, i.e. those with the more severe gland involvement, enhancement values were lower during stimulation than at rest. Conclusion: Preliminary results indicate that contrast-enhanced US imaging can provide useful information on sicca characterisation and

  14. Assessment of Barotrauma Resulting from Rapid Decompression of Depth Acclimated Juvenile Chinook Salmon Bearing Radio Telemetry Transmitters

    Energy Technology Data Exchange (ETDEWEB)

    Brown, Richard S.; Carlson, Thomas J.; Welch, Abigail E.; Stephenson, John R.; Abernethy, Cary S.; McKinstry, Craig A.; Theriault, Marie-Helene

    2007-09-06

    A multifactor study was conducted by Battelle for the US Army Corps of Engineers to assess the significance of the presence of a radio telemetry transmitter on the effects of rapid decompression from simulated hydro turbine passage on depth acclimated juvenile run-of-the-river Chinook salmon. Study factors were: (1) juvenile chinook salmon age;, subyearling or yearling, (2) radio transmitter present or absent, (3) three transmitter implantation factors: gastric, surgical, and no transmitter, and (4) four acclimation depth factors: 1, 10, 20, and 40 foot submergence equivalent absolute pressure, for a total of 48 unique treatments. Exposed fish were examined for changes in behavior, presence or absence of barotrauma injuries, and immediate or delayed mortality. Logistic models were used to test hypotheses that addressed study objectives. The presence of a radio transmitter was found to significantly increase the risk of barotrauma injury and mortality at exposure to rapid decompression. Gastric implantation was found to present a higher risk than surgical implantation. Fish were exposed within 48 hours of transmitter implantation so surgical incisions were not completely healed. The difference in results obtained for gastric and surgical implantation methods may be the result of study design and the results may have been different if tested fish had completely healed surgical wounds. However, the test did simulate the typical surgical-release time frame for in-river telemetry studies of fish survival so the results are probably representative for fish passing through a turbine shortly following release into the river. The finding of a significant difference in response to rapid decompression between fish bearing radio transmitters and those not implies a bias may exist in estimates of turbine passage survival obtained using radio telemetry. However, the rapid decompression (simulated turbine passage) conditions used for the study represented near worst case exposure

  15. Tucannon River Spring Chinook Captive Broodstock Program Final Environmental Assessment and Finding of No Significant Impact

    Energy Technology Data Exchange (ETDEWEB)

    N/A

    2000-05-24

    Bonneville Power Administration (BPA) is proposing to fund the Tucannon River Spring Chinook Captive Broodstock Program, a small-scale production initiative designed to increase numbers of a weak but potentially recoverable population of spring chinook salmon in the Tucannon River in the State of Washington. BPA has prepared an Environmental Assessment (EA) (DOE/EA-l326) evaluating the proposed project. Based on the analysis in the EA, BPA has determined that the proposed action is not a major Federal action significantly affecting the quality of the human environment, within the meaning of the National Environmental Policy Act (NEPA) of 1969. Therefore, the preparation of an Environmental Impact Statement (EIS) is not required, and BPA is issuing this Finding of No Significant Impact (FONSI).

  16. Pathogen Screening of Naturally Produced Yakima River Spring Chinook Smolts; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Pearsons, Todd N.; Thomas, Joan B. (Washington Department of Fish and Wildlife, Olympia, WA)

    2003-01-01

    The change in pathogens prevalence to wild fish is probably the least studied ecological interaction associated with hatchery operations. In 1999, the Cle Elum Hatchery began releasing spring chinook smolts into the upper Yakima River to increase natural production. Part of the evaluation of this program is to evaluate whether introduction of hatchery produced smolts would impact the prevalence of specific pathogens in the naturally produced spring chinook smolts. Increases in prevalence of any of these pathogens could negatively impact the survival of these fish. Approximately 200 smolts were collected at the Chandler smolt collection facility on the lower Yakima River during 1998, 2000 and 2001 and monitored for specific pathogens. The pathogens monitored were infectious hematopoeitic necrosis virus, infectious pancreatic necrosis virus, viral hemorrhagic septicemia, Flavobacterium psychrophilum, Flavobacterium columnare, Aeromonas salmonicida, Yersinia ruckeri, Edwardsiella ictaluri, Renibacterium salmoninarum and Myxobolus cerebralis. In addition, the fish were tested for Ceratomyxa shasta spores in 2001. Not all testing has been completed for every year, but to date, there have only been minimal changes in levels of the bacterial pathogens in the naturally produced smolts. At this point, due to the limited testing so far, these changes are attributed to normal fluctuation of prevalence.

  17. Survival of juvenile chinook salmon and coho salmon in the Roza Dam fish bypass and in downstream reaches of the Yakima River, Washington, 2016

    Science.gov (United States)

    Kock, Tobias J.; Perry, Russell W.; Hansen, Amy C.

    2016-12-22

    Executive SummaryEstimates of juvenile salmon survival are important data for fishery managers in the Yakima River Basin. Radiotelemetry studies during 2012–14 showed that tagged juvenile Chinook salmon (Oncorhynchus tshawytscha) that passed through the fish bypass at Roza Dam had lower survival than fish that passed through other routes at the dam. That study also identified flow-survival relationships in the reaches between the Roza Dam tailrace and Sunnyside Dam. During 2012–14, survival also was estimated through reaches downstream of Sunnyside Dam, but generally, sample sizes were low and the estimates were imprecise. In 2016, we conducted an evaluation using acoustic cameras and acoustic telemetry to build on information collected during the previous study. The goal of the 2016 research was to identify areas where mortality occurs in the fish bypass at Roza Dam, and to estimate reach-specific survival in reaches downstream of the dam. The 2016 study included juvenile Chinook salmon and coho salmon (O. kisutch).Three acoustic cameras were used to observe fish behavior (1) near the entrances to the fish bypass, (2) at a midway point in the fish bypass (convergence vault), and (3) at the bypass outfall. In total, 504 hours of acoustic camera footage was collected at these locations. We determined that smolt-sized fish (95–170 millimeters [mm]) were present in the highest proportions at each location, but predator-sized fish (greater than 250 mm) also were present at each site. Fish presence generally peaked during nighttime hours and crepuscular periods, and was low during daytime hours. In the convergence vault, smolt-sized fish exhibited holding behavior patterns, which may explain why some fish delayed while passing through the bypass.Some of the acoustic-tagged fish were delayed in the fish bypass following release, but there was no evidence to suggest that they experienced higher mortality than fish that were released at the bypass outfall or

  18. Food and feeding of juvenile chinook salmon in the central Columbia River in relation to thermal discharges and other environmental features

    Energy Technology Data Exchange (ETDEWEB)

    Becker, C.D. [Pacific Northwest Labs., Richland, WA (United States). Ecosystems Dept.

    1970-08-01

    The relationship of thermal discharges from operating Hanford reactors to food and feeding of juvenile chinook salmon (Oncorhynchus tshawytscha) in the central Columbia River, Washington was studied in 1968 and 1969. The primary objectives were to (1) evaluate the food composition and feeding activities of the fish and (2) determine if heated effluents influenced their welfare. Environmental conditions (seasonal changes in river temperatures and flow volumes) in relation to thermal requirements of young chinook are detailed. Data on food organisms utilized by the fish in 1968 and 1969 are presented, whereas analyses for possible thermal effects are based on the more extensive 1969 data. No consistent differences attributable to thermal increments were evident. The lack of detectable effects apparently results from the fact that the main discharge plumes occur in midriver and the effluents are well mixed before reaching inshore feeding areas. The transient nature of fish at each sampling site and the availability of food organisms in the river drift are ecological factors affecting critical thermal evaluation.

  19. Spring Chinook Salmon Interactions Indices and Residual/Precocial Monitoring in the Upper Yakima Basin, 1998 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    James, Brenda B.; Pearsons, Todd N.; McMichael, Geoffrey A. (Washington Department of Fish and Wildlife, Olympia, WA)

    1999-12-01

    Select ecological interactions and spring chinook salmon residual/precocial abundance were monitored in 1998 as part of the Yakima/Klickitat Fisheries Project's supplementation monitoring program. Monitoring these variables is part of an effort to help evaluate the factors that contribute to, or limit supplementation success. The ecological interactions that were monitored were prey consumption, competition for food, and competition for space. The abundance of spring chinook salmon life-history forms that have the potential to be influenced by supplementation and that have important ecological and genetic roles were monitored (residuals and precocials). Residual spring chinook salmon do not migrate to the ocean during the normal emigration period and continue to rear in freshwater. Precocials are those salmon that precocially mature in freshwater. The purpose of sampling during 1998 was to collect baseline data one year prior to the release of hatchery spring chinook salmon which occurred during the spring of 1999. All sampling that the authors report on here was conducted in upper Yakima River during summer and fall 1998. The stomach fullness of juvenile spring chinook salmon during the summer and fall averaged 12%. The food competition index suggested that mountain whitefish (0.59), rainbow trout (0.55), and redside shiner (0.55) were competing for food with spring chinook salmon. The space competition index suggested that rainbow trout (0.31) and redside shiner (0.39) were competing for space with spring chinook salmon but mountain whitefish (0.05) were not. Age-0 spring chinook salmon selected a fairly narrow range of microhabitat parameters in the summer and fall relative to what was available. Mean focal depths and velocities for age 0 spring chinook salmon during the summer were 0.5 m {+-} 0.2 m and 0.26 m/s {+-} 0.19 m/s, and during the fall 0.5 m {+-} 0.2 m and 0.24 m/s {+-} 0.18 m/s. Among potential competitors, age 1+ rainbow trout exhibited the

  20. Physiological development and migratory behavior of subyearling fall chinook salmon in the Columbia River

    Science.gov (United States)

    Tiffan, K.F.; Rondorf, D.W.; Wagner, P.G.

    2000-01-01

    We describe the migratory behavior and physiological development of subyearling fall chinook salmon Oncorhynchus tshawytscha migrating through John Day Reservoir on the Columbia River, Washington and Oregon. Fish were freeze-branded and coded-wire-tagged at McNary Dam, Oregon, from 1991 to 1994, to determine travel time to John Day Dam and subsequent adult contribution. Stepwise multiple regression showed that 47% of the variation in subyearling fall chinook salmon travel time was explained by the reciprocal of minimum flow and fish size. Smoltification, as measured by gill Na+-K+ adenosine triphosphatase (ATPase) activity, was not important in explaining variability in travel time of subyearling chinook salmon. Fish marked early in the out-migration generally traveled faster than middle and late migrants. Seawater challenges were used to describe physiological development and showed that osmoregulatory competence of premigrants in the Hanford Reach of the Columbia River increased with fish size and gill ATPase activity. Once active migrants began passing McNary Dam, fish generally had survival exceeding 90% and were able to regulate their blood plasma Na+ in seawater. Gill ATPase activity increased as premigrants, reared in nearshore areas of the Hanford Reach, reached a peak among active migrants in late June and early July then decreased through the remainder of the out-migration. Salinity preference also peaked in subyearling fall chinook salmon during late June to mid July in 1995. Return of adults from marked groups showed no consistent patterns that would suggest a survival advantage for any portion of the juvenile out-migration. Presumed wild migrants from the middle and late portions of the out-migration were primary contributors to all fisheries, except the Priest Rapids Hatchery. As such, fishery managers should take action to ensure the survival of these fish, especially because they migrate under more unfavorable environmental conditions than early

  1. Surgically Implanted JSATS Micro-Acoustic Transmitters Effects on Juvenile Chinook Salmon and Steelhead Tag Expulsion and Survival, 2010

    Energy Technology Data Exchange (ETDEWEB)

    Woodley, Christa M.; Carpenter, Scott M.; Carter, Kathleen M.; Wagner, Katie A.; Royer, Ida M.; Knox, Kasey M.; Kim, Jin A.; Gay, Marybeth E.; Weiland, Mark A.; Brown, Richard S.

    2011-09-16

    The purpose of this study was to evaluate survival model assumptions associated with a concurrent study - Acoustic Telemetry Evaluation of Dam Passage Survival and Associated Metrics at John Day, The Dalles, and Bonneville Dams, 2010 by Thomas Carlson and others in 2010 - in which the Juvenile Salmonid Acoustic Telemetry System (JSATS) was used to estimate the survival of yearling and subyearling Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) migrating through the Federal Columbia River Power System (FCRPS). The micro-acoustic transmitter used in these studies is the smallest acoustic transmitter model to date (12 mm long x 5 mm wide x 4 mm high, and weighing 0.43 g in air). This study and the 2010 study by Carlson and others were conducted by researchers from the Pacific Northwest National Laboratory and the University of Washington for the U.S. Army Corps of Engineers, Portland District, to meet requirements set forth by the 2008 FCRPS Biological Opinion. In 2010, we compared survival, tag burden, and tag expulsion in five spring groups of yearling Chinook salmon (YCH) and steelhead (STH) and five summer groups of subyearling Chinook salmon (SYC) to evaluate survival model assumptions described in the concurrent study. Each tagging group consisted of approximately 120 fish/species, which were collected and implanted on a weekly basis, yielding approximately 600 fish total/species. YCH and STH were collected and implanted from late April to late May (5 weeks) and SYC were collected and implanted from mid-June to mid-July (5 weeks) at the John Day Dam Smolt Monitoring Facility. The fish were collected once a week, separated by species, and assigned to one of three treatment groups: (1) Control (no surgical treatment), (2) Sham (surgical implantation of only a passive integrated transponder [PIT] tag), and (3) Tagged (surgical implantation of JSATS micro-acoustic transmitter [AT] and PIT tags). The test fish were held for 30 days in indoor

  2. Impact of Redd Loss at Vernita Bar on Hanford Reach Chinook Salmon Production: Final Report 1988.

    Energy Technology Data Exchange (ETDEWEB)

    Rogers, Donald E.

    1988-10-01

    This report describes the effect on chinook salmon production within the Hanford Reach of redd loss at Vernita Bar. The current target escapement of 40,000 chinook past McNary dam has no real biological justification because the wrong data were used in the analysis and the methods used are now known to be very unreliable for the type of data available. The escapement that maximizes MSY may be lower than 40,000, or much higher, and reliable estimates of optimum escapement are unlikely to be available for several more years. If the optimum escapement is truly 40,000 (or less), then loss of a few hundred redds on Vernita Bar would have no detrimental, and possibly beneficial consequences on total chinook production from the Hanford Reach, so long as escapements are in excess of 40,000. If the optimal escapement is actually much higher (60,000+), the biological cost of redd loss when escapements are in excess of 40,000 would be about two fish in the adult return for every redd lost. So long as escapements exceed 40,000, the issue of redd loss at Vernita Bar is simply a question of losing a few dozen or hundred adult fish in the next brood and is not an issue of stock conservation. 12 refs., 6 figs., 12 tabs.

  3. Self-reporting bias in Chinook salmon sport fisheries in Idaho: implications for roving creel surveys

    Science.gov (United States)

    McCormick, Joshua L.; Quist, Michael C.; Schill, Daniel J.

    2013-01-01

    Self-reporting bias in sport fisheries of Chinook Salmon Oncorhynchus tshawytscha in Idaho was quantified by comparing observed and angler-reported data. A total of 164 observed anglers fished for 541 h and caught 74 Chinook Salmon. Fifty-eight fish were harvested and 16 were released. Anglers reported fishing for 604 h, an overestimate of 63 h. Anglers reported catching 66 fish; four less harvested and four less released fish were reported than observed. A Monte Carlo simulation revealed that when angler-reported data were used, total catch was underestimated by 14–15 fish (19–20%) using the ratio-of-means estimator to calculate mean catch rate. Negative bias was reduced to six fish (8%) when the means-of-ratio estimator was used. Multiple linear regression models to predict reporting bias in time fished had poor predictive value. However, actual time fished and a categorical covariate indicating whether the angler fished continuously during their fishing trip were two variables that were present in all of the top a priori models evaluated. Underreporting of catch and overreporting of time fished by anglers present challenges when managing Chinook Salmon sport fisheries. However, confidence intervals were near target levels and using more liberal definitions of angling when estimating effort in creel surveys may decrease sensitivity to bias in angler-reported data.

  4. Grande Ronde Basin Chinook Salmon Captive Brood and Conventional Supplementation Programs, 2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hoffnagle, Timothy L.; Hair, Don; Carmichael, Richard W. (Oregon Department of Fish and Wildlife, La Grande, OR)

    2004-07-01

    BPA Fish and Wildlife Program Project Number 1998-01-001 provides funding for the Grande Ronde Basin Spring Chinook Salmon Captive Broodstock Program. This report satisfies the requirement that an annual report be submitted for FY 2003. The Grande Ronde Basin Spring Chinook Salmon Captive Broodstock Project is designed to rapidly increase numbers of salmon in stocks that are in imminent danger of extirpation. Parr are captured in Catherine Creek, upper Grande Ronde River and Lostine River and reared to adulthood in captivity. Upon maturation, these fish are spawned (within stocks) and their progeny reared to smoltification before being released into the natal stream of their parents. This program is co-managed by ODFW, National Marine Fisheries Service, Nez Perce Tribe and Confederated Tribes of the Umatilla Indian Reservation. This report covers activities conducted and provides data analyses for the Grande Ronde Spring Chinook Salmon Captive broodstock Program from 1 January--31 December 2003. Since the fiscal year ends in the middle of the spawning period, an annual report based on calendar year is more logical. This document is the FY 2003 annual report. Detailed information on historic and present population status, project background, goals and objectives, significance to regional programs and relationships to other programs, methods and previous results are available in the 1995-2002 Project Status Report (Hoffnagle et al 2003).

  5. Re-estimating temperature-dependent consumption parameters in bioenergetics models for juvenile Chinook salmon

    Science.gov (United States)

    Plumb, John M.; Moffitt, Christine M.

    2015-01-01

    Researchers have cautioned against the borrowing of consumption and growth parameters from other species and life stages in bioenergetics growth models. In particular, the function that dictates temperature dependence in maximum consumption (Cmax) within the Wisconsin bioenergetics model for Chinook Salmon Oncorhynchus tshawytscha produces estimates that are lower than those measured in published laboratory feeding trials. We used published and unpublished data from laboratory feeding trials with subyearling Chinook Salmon from three stocks (Snake, Nechako, and Big Qualicum rivers) to estimate and adjust the model parameters for temperature dependence in Cmax. The data included growth measures in fish ranging from 1.5 to 7.2 g that were held at temperatures from 14°C to 26°C. Parameters for temperature dependence in Cmax were estimated based on relative differences in food consumption, and bootstrapping techniques were then used to estimate the error about the parameters. We found that at temperatures between 17°C and 25°C, the current parameter values did not match the observed data, indicating that Cmax should be shifted by about 4°C relative to the current implementation under the bioenergetics model. We conclude that the adjusted parameters for Cmax should produce more accurate predictions from the bioenergetics model for subyearling Chinook Salmon.

  6. Imaging fall Chinook salmon redds in the Columbia River with a dual-frequency identification sonar

    Science.gov (United States)

    Tiffan, K.F.; Rondorf, D.W.; Skalicky, J.J.

    2004-01-01

    We tested the efficacy of a dual-frequency identification sonar (DIDSON) for imaging and enumeration of fall Chinook salmon Oncorhynchus tshawytscha redds in a spawning area below Bonneville Dam on the Columbia River. The DIDSON uses sound to form near-video-quality images and has the advantages of imaging in zero-visibility water and possessing a greater detection range and field of view than underwater video cameras. We suspected that the large size and distinct morphology of a fall Chinook salmon redd would facilitate acoustic imaging if the DIDSON was towed near the river bottom so as to cast an acoustic shadow from the tailspill over the redd pocket. We tested this idea by observing 22 different redds with an underwater video camera, spatially referencing their locations, and then navigating to them while imaging them with the DIDSON. All 22 redds were successfully imaged with the DIDSON. We subsequently conducted redd searches along transects to compare the number of redds imaged by the DIDSON with the number observed using an underwater video camera. We counted 117 redds with the DIDSON and 81 redds with the underwater video camera. Only one of the redds observed with the underwater video camera was not also documented by the DIDSON. In spite of the DIDSON's high cost, it may serve as a useful tool for enumerating fall Chinook salmon redds in conditions that are not conducive to underwater videography.

  7. Innate and adaptive immune responses in migrating spring-run adult chinook salmon, Oncorhynchus tshawytscha

    Science.gov (United States)

    Dolan, Brian P.; Fisher, Kathleen M.; Colvin, Michael E.; Benda, Susan E.; Peterson, James T.; Kent, Michael L.; Schreck, Carl B.

    2016-01-01

    Adult Chinook salmon (Oncorhynchus tshawytscha) migrate from salt water to freshwater streams to spawn. Immune responses in migrating adult salmon are thought to diminish in the run up to spawning, though the exact mechanisms for diminished immune responses remain unknown. Here we examine both adaptive and innate immune responses as well as pathogen burdens in migrating adult Chinook salmon in the Upper Willamette River basin. Messenger RNA transcripts encoding antibody heavy chain molecules slightly diminish as a function of time, but are still present even after fish have successfully spawned. In contrast, the innate anti-bacterial effector proteins present in fish plasma rapidly decrease as spawning approaches. Fish also were examined for the presence and severity of eight different pathogens in different organs. While pathogen burden tended to increase during the migration, no specific pathogen signature was associated with diminished immune responses. Transcript levels of the immunosuppressive cytokines IL-10 and TGF beta were measured and did not change during the migration. These results suggest that loss of immune functions in adult migrating salmon are not due to pathogen infection or cytokine-mediated immune suppression, but is rather part of the life history of Chinook salmon likely induced by diminished energy reserves or hormonal changes which accompany spawning.

  8. Enhanced sludge properties and distribution study of sludge components in electrically-enhanced membrane bioreactor.

    Science.gov (United States)

    Giwa, Adewale; Ahmed, Iftikhar; Hasan, Shadi Wajih

    2015-08-15

    This study investigated the impact of electric field on the physicochemical and biological characteristics of sludge wasted from an electrically-enhanced membrane bioreactor treating medium-strength raw wastewater. This method offers a chemical-free electrokinetic technique to enhance sludge properties and remove heavy metals. For example, sludge volume index (SVI), time-to-filter (TTF), mean sludge particle diameter (PSD), viscosity, and oxidation-reduction potential (ORP) of 21.7 mL/g, 7 min, 40.2 μm, 3.22 mPa s, and -4.9 mV were reported, respectively. Also, X-ray fluorescence (XRF) and X-ray diffraction (XRD) analyses provided mechanisms for heavy metal removal so as to establish relevant pathways for nutrient recovery. Furthermore, variations in dissolved oxygen (DO), conductivity, viscosity, ORP, total suspended solids (MLSS), and volatile suspended solids (MLVSS) were interrelated to evaluate the quality of wasted sludge. A pathway study on the transport and chemical distribution of nutrients and metals in sludge showed great potential for metal removal and nutrient recovery.

  9. A comparative study of Raman enhancement in capillaries

    Science.gov (United States)

    Eftekhari, Fatemeh; Irizar, Juan; Hulbert, Laila; Helmy, Amr S.

    2011-06-01

    This work reports on the comparative studies of Raman enhancement in liquid core waveguides (LCWs). The theoretical considerations that describe Raman enhancement in LCWs is adapted to analyze and compare the performance of hollow core photonic crystal fibers (HCPCFs) to conventional Teflon capillary tubes. The optical losses in both platforms are measured and used to predict their performance for different lengths. The results show that for an optimal waveguide length, two orders of magnitude enhancement in the Raman signal can be achieved for aqueous solutions using HCPCFs. This length, however, cannot be achieved using normal capillary effects. By integrating the interface of the fluidic pump and the HCPCF into a microfluidic chip, we are able to control fluid transport and fill longer lengths of HCPCFs regardless of the viscosity of the sample. The long-term stability and reproducibility of Raman spectra attained through this platform are demonstrated for naphthalenethiol, which is a well-studied organic compound. Using the HCPCF platform, the detection limit of normal Raman scattering in the range of micro-molars has been achieved. In addition to the higher signal-to-noise ratio of the Raman signal from the HCPCF-platform, more Raman modes of naphthalenethiol are revealed using this platform.

  10. Emigration of Natural and Hatchery Naco x (Chinook salmon; Oncorhynchus tshawytscha) and Heeyey (Steelhead; Oncorhynchus mykiss) Smolts from the Imnaha River, Oregon from 5 October 2006 to 21 June 2007, Annual Report 2007.

    Energy Technology Data Exchange (ETDEWEB)

    Michaels, Brian; Espinosa, Neal (Nez Perce Tribe)

    2009-02-18

    This report summarizes the Nez Perce Tribe (NPT) Department of Fisheries Resources Management (DFRM) results for the Lower Snake River Compensation Plan (LSRCP) Hatchery Evaluation studies and the Imnaha River Smolt Monitoring Program (SMP) for the 2007 smolt migration from the Imnaha River, Oregon. These studies are closely coordinated and provide information about juvenile natural and hatchery spring/summer Naco x (Chinook Salmon; Oncorhynchus tshawytscha) and Heeyey (steelhead; O. mykiss) biological characteristics, emigrant timing, survival, arrival timing and travel time to the Snake River dams and McNary Dam (MCD) on the Columbia River. These studies provide information on listed Naco x (Chinook salmon) and Heeyey (steelhead) for the Federal Columbia River Power System (FCRPS) Biological Opinion (NMFS 2000). The Lower Snake River Compensation Plan program's goal is to maintain a hatchery production program of 490,000 Naco x (Chinook salmon) and 330,000 Heeyey (steelhead) for annual release in the Imnaha River (Carmichael et al. 1998, Whitesel et al. 1998). These hatchery releases occur to compensate for fish losses due to the construction and operation of the four lower Snake River hydroelectric facilities. One of the aspects of the LSRCP hatchery evaluation studies in the Imnaha River is to determine natural and hatchery Naco x (Chinook salmon) and Heeyey (steelhead) smolt performance, emigration characteristics and survival (Kucera and Blenden 1998). A long term monitoring effort was established to document smolt emigrant timing and post release survival within the Imnaha River, estimate smolt survival downstream to McNary Dam, compare natural and hatchery smolt performance, and collect smolt-to-adult return information. This project collects information for, and is part of, a larger effort entitled Smolt Monitoring by Federal and Non-Federal Agencies (BPA Project No. 198712700). This larger project provides data on movement of smolts out of major

  11. Experimental study on CHF enhancement of plate by ultrasonic

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Dae Hun; Kweon, Young Chel [Sunmoon Univ., Asan (Korea, Republic of); Jeong, Ji Hwan [Chonan College of Foreign Studies, Chonan (Korea, Republic of)

    2003-07-01

    Augmentation of CHF by ultrasonic is experimentally studied under subcooling pool boiling condition. Experiment is carried out for downward-facing plate with and without the ultrasonic. The working fluid is distilled water. Experimental apparatus is composed of a bath, power supply, test section, ultrasonic generator, DAQ system. Experiment is performed with the subcooling temperature of 5 .deg. C, 20 .deg. C, 40 .deg. C and the inclined angle of 0 .deg., 10 .deg., 20 .deg., 45 .deg., 90 .deg.. From the experimental results, it is found that ultrasonic effect enhances CHF of the downward-facing plate. As increasing the degree of subcooling, the rate of CHF increase is enhanced. As increasing the inclined angle, the rate of CHF increase decreases. Also, we can see that the heat transfer mechanism of CHF augmentation is closely connected with the dynamic behavior of bubble generation and departure.

  12. Safety Culture Enhancement Project. Final Report. A Field Study on Approaches to Enhancement of Safety Culture

    Energy Technology Data Exchange (ETDEWEB)

    Lowe, Andrew; Hayward, Brent (Dedale Asia Pacific, Albert Park VIC 3206 (Australia))

    2006-08-15

    This report documents a study with the objective of enhancing safety culture in the Swedish nuclear power industry. A primary objective of this study was to ensure that the latest thinking on human factors principles was being recognised and applied by nuclear power operators as a means of ensuring optimal safety performance. The initial phase of the project was conducted as a pilot study, involving the senior management group at one Swedish nuclear power-producing site. The pilot study enabled the project methodology to be validated after which it was repeated at other Swedish nuclear power industry sites, providing a broad-ranging analysis of opportunities across the industry to enhance safety culture. The introduction to this report contains an overview of safety culture, explains the background to the project and sets out the project rationale and objectives. The methodology used for understanding and analysing the important safety culture issues at each nuclear power site is then described. This section begins with a summary of the processes used in the information gathering and data analysis stage. The six components of the Management Workshops conducted at each site are then described. These workshops used a series of presentations, interactive events and group exercises to: (a) provide feedback to site managers on the safety culture and safety leadership issues identified at their site, and (b) stimulate further safety thinking and provide 'take-away' information and leadership strategies that could be applied to promote safety culture improvements. Section 3, project Findings, contains the main observations and output from the project. These include: - a brief overview of aspects of the local industry operating context that impinge on safety culture; - a summary of strengths or positive attributes observed within the safety culture of the Swedish nuclear industry; - a set of identified opportunities for further improvement; - the aggregated

  13. Determination of Swimming Speeds and Energetic Demands of Upriver Migrating Fall Chinook Salmon (Oncorhynchus Tshawytscha) in the Klickitat River, Washington.

    Energy Technology Data Exchange (ETDEWEB)

    Brown, Richard S.; Geist, David R.; Confederated Tribes and Bands of the Yakama Nation, Washington

    2002-08-30

    This report describes a study conducted by Pacific Northwest National Laboratory for the Bonneville Power Administration's Columbia Basin Fish and Wildlife Program during the fall of 2001. The objective was to study the migration and energy use of adult fall chinook salmon (Oncorhynchus tshawytscha) traveling up the Klickitat River to spawn. The salmon were tagged with either surgically implanted electromyogram (EMG) transmitters or gastrically implanted coded transmitters and were monitored with mobile and stationary receivers. Swim speed and aerobic and anaerobic energy use were determined for the fish as they attempted passage of three waterfalls on the lower Klickitat River and as they traversed free-flowing stretches between, below, and above the falls. Of the 35 EMG-tagged fish released near the mouth of the Klickitat River, 40% passed the first falls, 24% passed the second falls, and 20% made it to Lyle Falls. None of the EMG-tagged fish were able to pass Lyle Falls, either over the falls or via a fishway at Lyle Falls. Mean swimming speeds ranged from as low as 52.6 centimeters per second (cm s{sup -1}) between falls to as high as 189 (cm s{sup -1}) at falls passage. Fish swam above critical swimming speeds while passing the falls more often than while swimming between the falls (58.9% versus 1.7% of the transmitter signals). However, fish expended more energy swimming the stretches between the falls than during actual falls passage (100.7 to 128.2 kilocalories [kcals] to traverse areas between or below falls versus 0.3 to 1.0 kcals to pass falls). Relationships between sex, length, and time of day on the success of falls passage were also examined. Average swimming speeds were highest during the day in all areas except at some waterfalls. There was no apparent relationship between either fish condition or length and successful passage of waterfalls in the lower Klickitat River. Female fall chinook salmon, however, had a much lower likelihood of

  14. Emigration of Natural and Hatchery Naco x (Chinook salmon; Oncorhynchus tshawytscha) and Heeyey (Steelhead; Oncorhynchus mykiss) Smolts from the Imnaha River, Oregon from 5 October 2006 to 21 June 2007, Annual Report 2007.

    Energy Technology Data Exchange (ETDEWEB)

    Michaels, Brian; Espinosa, Neal (Nez Perce Tribe)

    2009-02-18

    This report summarizes the Nez Perce Tribe (NPT) Department of Fisheries Resources Management (DFRM) results for the Lower Snake River Compensation Plan (LSRCP) Hatchery Evaluation studies and the Imnaha River Smolt Monitoring Program (SMP) for the 2007 smolt migration from the Imnaha River, Oregon. These studies are closely coordinated and provide information about juvenile natural and hatchery spring/summer Naco x (Chinook Salmon; Oncorhynchus tshawytscha) and Heeyey (steelhead; O. mykiss) biological characteristics, emigrant timing, survival, arrival timing and travel time to the Snake River dams and McNary Dam (MCD) on the Columbia River. These studies provide information on listed Naco x (Chinook salmon) and Heeyey (steelhead) for the Federal Columbia River Power System (FCRPS) Biological Opinion (NMFS 2000). The Lower Snake River Compensation Plan program's goal is to maintain a hatchery production program of 490,000 Naco x (Chinook salmon) and 330,000 Heeyey (steelhead) for annual release in the Imnaha River (Carmichael et al. 1998, Whitesel et al. 1998). These hatchery releases occur to compensate for fish losses due to the construction and operation of the four lower Snake River hydroelectric facilities. One of the aspects of the LSRCP hatchery evaluation studies in the Imnaha River is to determine natural and hatchery Naco x (Chinook salmon) and Heeyey (steelhead) smolt performance, emigration characteristics and survival (Kucera and Blenden 1998). A long term monitoring effort was established to document smolt emigrant timing and post release survival within the Imnaha River, estimate smolt survival downstream to McNary Dam, compare natural and hatchery smolt performance, and collect smolt-to-adult return information. This project collects information for, and is part of, a larger effort entitled Smolt Monitoring by Federal and Non-Federal Agencies (BPA Project No. 198712700). This larger project provides data on movement of smolts out of major

  15. Monitoring and Evaluation of Yearling Fall Chinook Salmon (Oncorhynchus tshawytscha) Released from Acclimation Facilities Upstream of Lower Granite Dam; 2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rocklage, Stephen J.; Kellar, Dale S. (Nez Perce Tribe, Department of Fisheries Resource Management, ID)

    2005-07-01

    The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fall Chinook salmon Oncorhynchus tshawytscha that were acclimated and released at three Fall Chinook Acclimation Project sites upstream of Lower Granite Dam in 2002. This was the seventh year of a long-term project to supplement natural spawning populations of Snake River stock fall Chinook salmon upstream of Lower Granite Dam. The 479,358 yearlings released from the Fall Chinook Acclimation Project facilities exceeded the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 7,545 PIT tagged yearlings from Pittsburg Landing, 7,482 from Big Canyon and 2,487 from Captain John Rapids. Fish health sampling indicated that, overall, bacterial kidney disease levels at the acclimation facilities could be considered medium to high with 43-62% of fish sampled rating medium to very high. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 146.7 mm (146.2-147.2 mm) at Captain John Rapids to 164.8 mm (163.5-166.1 mm) at Lyons Ferry Hatchery. Mean condition factors ranged from 1.06 at Lyons Ferry Hatchery to 1.14 at Pittsburg Landing and Captain John Rapids. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 88.6% (86.0-91.1%) for Pittsburg Landing to 97.0% (92.4-101.7%) for Captain John Rapids. Estimated survival from release to McNary Dam ranged from 54.3% (50.2-58.3%) for Big Canyon to 70.5% (65.4-75.5%) for Pittsburg Landing. Median migration rates to Lower Granite Dam, based on all observations of PIT tagged yearlings from the FCAP facilities, ranged from 8.1 river kilometers per

  16. Fall Chinook Acclimation Project; Pittsburg Landing, Captain John Rapids, and Big Canyon, Annual Report 2003.

    Energy Technology Data Exchange (ETDEWEB)

    McLeod, Bruce

    2004-01-01

    Fisheries co-managers of U.S. v Oregon supported and directed the construction and operation of acclimation and release facilities for Snake River fall Chinook from Lyons Ferry Hatchery at three sites above Lower Granite Dam. In 1996, Congress instructed the U.S. Army Corps of Engineers (USCOE) to construct, under the Lower Snake River Compensation Plan (LSRCP), final rearing and acclimation facilities for fall Chinook in the Snake River basin to complement their activities and efforts in compensating for fish lost due to construction of the lower Snake River dams. The Nez Perce Tribe (NPT) played a key role in securing funding and selecting acclimation sites, then assumed responsibility for operation and maintenance of the facilities. In 1997, Bonneville Power Administrative (BPA) was directed to fund operations and maintenance (O&M) for the facilities. Two acclimation facilities, Captain John Rapids and Pittsburg Landing, were located on the Snake River between Asotin, WA and Hells Canyon Dam and one facility, Big Canyon, was located on the Clearwater River at Peck. The Capt. John Rapids facility is a single pond while the Pittsburg Landing and Big Canyon sites consist of portable fish rearing tanks assembled and disassembled each year. Acclimation of 450,000 yearling smolts (150,000 each facility) begins in March and ends 6 weeks later. When available, an additional 2,400,000 fall Chinook sub-yearlings may be acclimated for 6 weeks, following the smolt release. The project goal is to increase the naturally spawning population of Snake River fall Chinook salmon upstream of Lower Granite Dam. This is a supplementation project; in that hatchery produced fish are acclimated and released into the natural spawning habitat for the purpose of returning a greater number of spawners to increase natural production. Only Snake River stock is used and production of juveniles occurs at Lyons Ferry Hatchery. This is a long-term project, targeted to work towards achieving

  17. Monitoring the Migrations of Wild Snake River Spring/Summer Chinook Salmon Smolts, 2002-2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Achord, Stephen; McNatt, Regan A.; Hockersmith, Eric E. (National Marine Fisheries Service, Northwest Fisheries Science Center, Fish Ecology Division, Seattle, WA)

    2004-04-01

    Prior to 1992, decisions on dam operations and use of stored water relied on recoveries of branded hatchery fish, index counts at traps and dams, and flow patterns at the dams. The advent of PIT-tag technology provided the opportunity to precisely track the smolt migrations of many wild stocks as they pass through the hydroelectric complex and other monitoring sites on their way to the ocean. With the availability of the PIT tag, a more complete approach to these decisions was undertaken starting in 1992 with the addition of PIT-tag detections of several wild spring and summer chinook salmon stocks at Lower Granite Dam. Using data from these detections, we initiated development of a database on wild fish, addressing several goals of the Columbia River Basin Fish and Wildlife Program of the Pacific Northwest Electric Power Planning Council and Conservation Act (NPPC 1980). Section 304(d) of the program states, ''The monitoring program will provide information on the migrational characteristics of the various stocks of salmon and steelhead within the Columbia Basin.'' Further, Section 201(b) urges conservation of genetic diversity, which will be possible only if wild stocks are preserved. Section 5.9A.1 of the 1994 Fish and Wildlife Program states that field monitoring of smolt movement will be used to determine the best timing for water storage releases and Section 5.8A.8 states that continued research is needed on survival of juvenile wild fish before they reach the first dam with special attention to water quantity, quality, and several other factors. The goals of this ongoing study are as follows (1) Characterize the migration timing and estimate parr-to-smolt survival of different stocks of wild Snake River spring/summer chinook salmon smolts at Lower Granite Dam. (2) Determine whether consistent migration patterns are apparent. (3) Determine what environmental factors influence these patterns. (4) Characterize the migrational behavior and

  18. [Study on cine view of relative enhancement ratio map in O2-enhanced MRI].

    Science.gov (United States)

    Fujii, Keita; Watanabe, Yasushi; Hanaoka, Shouhei; Motoyoshi, Kouichi; Goto, Masami; Amemiya, Shiori; Ino, Kenji; Akahane, Masaaki; Yano, Keiichi; Ohtomo, Kuni

    2014-11-01

    Magnetic resonance imaging (MRI) enables the evaluation of organ structure and function. Oxygen-enhanced MRI (O2-enhanced MRI) is a method for evaluating the pulmonary ventilation function using oxygen as a contrast agent. We created the Cine View of Relative Enhancement Ratio Map (Cine RER map) in O2-enhanced MRI to easily observe the contrast effect for clinical use. Relative enhancement ratio (RER) was determined as the pixel values of the Cine RER map. Moreover, six healthy volunteers underwent O2-enhanced MRI to determine the appropriate scale width of the Cine RER map. We calculated each RER and set 0 to 1.27 as the scale width of the Cine RER map based on the results. The Cine RER map made it possible to observe the contrast effect over time and thus is a convenient tool for evaluating the pulmonary ventilation function in O2-enhanced MRI.

  19. Safety Culture Enhancement Project. Final Report. A Field Study on Approaches to Enhancement of Safety Culture

    Energy Technology Data Exchange (ETDEWEB)

    Lowe, Andrew; Hayward, Brent (Dedale Asia Pacific, Albert Park VIC 3206 (Australia))

    2006-08-15

    This report documents a study with the objective of enhancing safety culture in the Swedish nuclear power industry. A primary objective of this study was to ensure that the latest thinking on human factors principles was being recognised and applied by nuclear power operators as a means of ensuring optimal safety performance. The initial phase of the project was conducted as a pilot study, involving the senior management group at one Swedish nuclear power-producing site. The pilot study enabled the project methodology to be validated after which it was repeated at other Swedish nuclear power industry sites, providing a broad-ranging analysis of opportunities across the industry to enhance safety culture. The introduction to this report contains an overview of safety culture, explains the background to the project and sets out the project rationale and objectives. The methodology used for understanding and analysing the important safety culture issues at each nuclear power site is then described. This section begins with a summary of the processes used in the information gathering and data analysis stage. The six components of the Management Workshops conducted at each site are then described. These workshops used a series of presentations, interactive events and group exercises to: (a) provide feedback to site managers on the safety culture and safety leadership issues identified at their site, and (b) stimulate further safety thinking and provide 'take-away' information and leadership strategies that could be applied to promote safety culture improvements. Section 3, project Findings, contains the main observations and output from the project. These include: - a brief overview of aspects of the local industry operating context that impinge on safety culture; - a summary of strengths or positive attributes observed within the safety culture of the Swedish nuclear industry; - a set of identified opportunities for further improvement; - the aggregated

  20. Hydraulic Characteristics of the Lower Snake River during Periods of Juvenile Fall Chinook Salmon Migration, 2002-2006 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Cook, C.; Dibrani, B.; Richmond, M.; Bleich, M.; Titzler, P..; Fu, T. [Pacific Northwest National Laboratory

    2006-01-01

    This report documents a four-year study to assess hydraulic conditions in the lower Snake River. The work was conducted for the Bonneville Power Administration, U.S. Department of Energy, by the Pacific Northwest National Laboratory. Cold water released from the Dworshak Reservoir hypolimnion during mid- to late-summer months cools the Clearwater River far below equilibrium temperature. The volume of released cold water augments the Clearwater River, and the combined total discharge is on the order of the Snake River discharge when the two rivers meet at their confluence near the upstream edge of Lower Granite Reservoir. With typical temperature differences between the Clearwater and Snake rivers of 10 C or more during July and August, the density difference between the two rivers during summer flow augmentation periods is sufficient to stratify Lower Granite Reservoir as well as the other three reservoirs downstream. Because cooling of the river is desirable for migrating juvenile fall Chinook salmon (Oncorhynchus tshawytscha) during this same time period, the amount of mixing and cold water entrained into Lower Granite Reservoir's epilimnion at the Clearwater/Snake River confluence is of key biological importance. Data collected during this project indicates the three reservoirs downstream of Lower Granite also stratify as direct result of flow augmentation from Dworshak Reservoir. These four reservoirs are also heavily influenced by wind forcing at the water's surface and during periods of low river discharge often behave like a two-layer lake. During these periods of stratification, lower river discharge, and wind forcing, the water in the upper layer of the reservoir is held in place or moves slightly upstream. This upper layer is also exposed to surface heating and may warm up to temperatures close to equilibrium temperature. The thickness (depth) of this upper warm layer and its direction of travel may be of key biological importance to juvenile

  1. Pen Rearing and Imprinting of Fall Chinook Salmon, 1986 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Novotny, Jerry F.; Macy, Thomas L.; Gardenier, James T.; Beeman, John W.

    1986-12-01

    Pen rearing studies during 1986 completed the second of three years intended for rearing and releasing upriver bright fall chinook salmon (Oncorhynchus tshawytscha) from two study sites, a backwater and a pond, adjacent to the Columbia River; both areas are located in the Jonn Day Reservoir. Results of this study in 1984 and 1985 showed that fish could be successfully reared in net pens and that growth and physiological development of the off-station reared fish proceeded at a faster rate than in fish reared at a hatchery. Transfer of fish from the hatchery to off-station sites at Social Security Pond (pond) and Rock Creek (backwater) during early March increased the period of rearing in 1986 by about four weeks. The increased period of rearing allowed all treatments of fed fish to reach a minimum weight of YU fish/lb by release. Differences in growth of fed fish between regular density treatments and additional, high density treatments (double and triple the regular densities) were not significantly different (P > 0.05), but growth of all fed fish reared off-station was again significantly better than that of hatchery reared fish (P < 0.05), Mortalities in all groups of fed fish were low. Physiological development of fed fish was similar in all treatments. At release, development of fish at Social Security Pond appeared to be somewhat ahead of fish at Rock Creek on the same dates however, none of the groups of fed fish achieved a high state of smoltification by release. Unfed fish grew poorly over the redring period, and at release were significantly smaller than either fed groups at the off-station sites, or the control groups reared at the hatchery (P < 0.05). Development of unfed fish toward smoltification was much slower than of fed fish. Mortality of all groups of unfed fish, including the barrier net, was relatively low. Health of all fish reared off-station remained good over the rearing period, and no outbreaks of disease were noted. On-site marking and

  2. Enhanced MRI in patients with facial palsy; Study of time-related enhancement

    Energy Technology Data Exchange (ETDEWEB)

    Yanagida, Masahiro; Kato, Tsutomu; Ushiro, Koichi; Kitajiri, Masanori; Yamashita, Toshio; Kumazawa, Tadami; Tanaka, Yoshimasa (Kansai Medical School, Moriguchi, Osaka (Japan))

    1991-03-01

    We performed Gd-DTPA-enhanced magnetic resonance imaging (MRI) examinations at several stages in 40 patients with peripheral facial nerve palsy (Bell's palsy and Ramsay-Hunt syndrome). In 38 of the 40 patients, one and more enhanced region could be seen in certain portion of the facial nerve in the temporal bone on the affected side, whereas no enhanced regions were seen on the intact side. Correlations between the timing of the MRI examination and the location of the enhanced regions were analysed. In all 6 patients examined by MRI within 5 days after the onset of facial nerve palsy, enhanced regions were present in the meatal portion. In 3 of the 8 patients (38%) examined by MRI 6 to 10 days after the onset of facial palsy, enhanced areas were seen in both the meatal and labyrinthine portions. In 8 of the 9 patients (89%) tested 11 to 20 days after the onset of palsy, the vertical portion was enhanced. In the 12 patients examined by MRI 21 to 40 days after the onset of facial nerve palsy, the meatal portion was not enhanced while the labyrinthine portion, the horizontal portion and the vertical portion were enhanced in 5 (42%), 8 (67%) and 11 (92%), respectively. Enhancement in the vertical portion was observed in all 5 patients examined more than 41 days after the onset of facial palsy. These results suggest that the central portion of the facial nerve in the temporal bone tends to be enhanced in the early stage of facial nerve palsy, while the peripheral portion is enhanced in the late stage. These changes of Gd-DTPA enhanced regions in the facial nerve may suggest dromic degeneration of the facial nerve in peripheral facial nerve palsy. (author).

  3. Comparing the survival rate of juvenile Chinook salmon migrating through hydropower systems using injectable and surgical acoustic transmitters

    Science.gov (United States)

    Deng, Z. D.; Martinez, J. J.; Li, H.; Harnish, R. A.; Woodley, C. M.; Hughes, J. A.; Li, X.; Fu, T.; Lu, J.; McMichael, G. A.; Weiland, M. A.; Eppard, M. B.; Skalski, J. R.; Townsend, R. L.

    2017-02-01

    Acoustic telemetry is one of the primary technologies for studying the behavior and survival of fishes throughout the world. The size and performance of the transmitter are key limiting factors. The newly developed injectable transmitter is the first acoustic transmitter that can be implanted via injection instead of surgery. A two-part field study was conducted to evaluate the performance of the injectable transmitter and its effect on the survival of implanted fish. The injectable transmitter performed well and similarly to the proceeding generation of commercially-available JSATS transmitters tested concurrently. Snake River subyearling Chinook salmon smolts implanted with the injectable transmitter had a higher survival probability from release to each of eleven downstream detection arrays, because reach-specific survival estimates were significantly higher for the injectable group in three of the eleven reaches examined. Overall, the injectable group had a 0.263 (SE = 0.017) survival probability over the entire 500 km study area compared to 0.199 (0.012) for the surgically implanted group. The reduction in size and ability to implant the new transmitter via injection has reduced the tag or tagging effect bias associated with studying small fishes. The information gathered with this new technology is helping to evaluate the impacts of dams on fishes.

  4. Comparing the survival rate of juvenile Chinook salmon migrating through hydropower systems using injectable and surgical acoustic transmitters

    Science.gov (United States)

    Deng, Z. D.; Martinez, J. J.; Li, H.; Harnish, R. A.; Woodley, C. M.; Hughes, J. A.; Li, X.; Fu, T.; Lu, J.; McMichael, G. A.; Weiland, M. A.; Eppard, M. B.; Skalski, J. R.; Townsend, R. L.

    2017-01-01

    Acoustic telemetry is one of the primary technologies for studying the behavior and survival of fishes throughout the world. The size and performance of the transmitter are key limiting factors. The newly developed injectable transmitter is the first acoustic transmitter that can be implanted via injection instead of surgery. A two-part field study was conducted to evaluate the performance of the injectable transmitter and its effect on the survival of implanted fish. The injectable transmitter performed well and similarly to the proceeding generation of commercially-available JSATS transmitters tested concurrently. Snake River subyearling Chinook salmon smolts implanted with the injectable transmitter had a higher survival probability from release to each of eleven downstream detection arrays, because reach-specific survival estimates were significantly higher for the injectable group in three of the eleven reaches examined. Overall, the injectable group had a 0.263 (SE = 0.017) survival probability over the entire 500 km study area compared to 0.199 (0.012) for the surgically implanted group. The reduction in size and ability to implant the new transmitter via injection has reduced the tag or tagging effect bias associated with studying small fishes. The information gathered with this new technology is helping to evaluate the impacts of dams on fishes. PMID:28220850

  5. Sexual selection for genetic compatibility: the role of the major histocompatibility complex on cryptic female choice in Chinook salmon (Oncorhynchus tshawytscha).

    Science.gov (United States)

    Gessner, C; Nakagawa, S; Zavodna, M; Gemmell, N J

    2017-05-01

    Cryptic female choice (CFC), a form of sexual selection during or post mating, describes processes of differential sperm utilization by females to bias fertilization outcomes towards certain males. In Chinook salmon (Oncorhynchus tshawytscha) the ovarian fluid surrounding the ova of a given female differently enhances the sperm velocity of males. Sperm velocity is a key ejaculate trait that determines fertilization success in externally fertilizing fishes, thus the differential effect on sperm velocity might bias male fertilization outcomes and represent a mechanism of CFC. Once sperm reach the oocyte, CFC could potentially be further facilitated by sperm-egg interactions, which are well understood in externally fertilizing marine invertebrates. Here, we explored the potential genetic basis of both possible mechanisms of CFC by examining whether the genotypic combinations of mates (amino-acid divergence, number of shared alleles) at the major histocompatibility complex (MHC) class I and II explain the variation in sperm velocity and/or male fertilization success that is not explained by sperm velocity, which might indicate MHC-based sperm-egg interactions. We recorded sperm velocity in ovarian fluid, employed paired-male fertilization trials and evaluated the fertilization success of each male using microsatellite-based paternity assignment. We showed that relative sperm velocity was positively correlated with fertilization success, confirming that the differential effect on sperm velocity may be a mechanism of CFC in Chinook salmon. The variation in sperm velocity was independent of MHC class I and II. However, the MHC class II divergence of mates explained fertilization success, indicating that this locus might influence sperm-egg interactions.

  6. Enhancing Patient Safety Using Clinical Nursing Data: A Pilot Study.

    Science.gov (United States)

    Choi, Jeeyae; Choi, Jeungok E

    2016-01-01

    To enhance patient safety from falls, many hospital information systems have been implemented to collect clinical data from the bedside and have used the information to improve fall prevention care. However, most of them use administrative data not clinical nursing data. This necessitated the development of a web-based Nursing Practice and Research Information Management System (NPRIMS) that processes clinical nursing data to measure nurses' delivery of fall prevention care and its impact on patient outcomes. This pilot study developed computer algorithms based on a falls prevention protocol and programmed the prototype NPRIMS. It successfully measured the performance of nursing care delivered and its impact on patient outcomes using clinical nursing data from the study site. Results of the study revealed that NPRIMS has the potential to pinpoint components of nursing processes that are in need of improvement for preventing patient from falls.

  7. Individual variability in esterase activity and CYP1A levels in Chinook salmon (Oncorhynchus tshawytscha) exposed to esfenvalerate and chlorpyrifos

    Science.gov (United States)

    Wheelock, C.E.; Eder, K.J.; Werner, I.; Huang, H.; Jones, P.D.; Brammell, B.F.; Elskus, A.A.; Hammock, B.D.

    2005-01-01

    Acetylcholinesterase (AChE) activity has traditionally been monitored as a biomarker of organophosphate (OP) and/or carbamate exposure. However, AChE activity may not be the most sensitive endpoint for these agrochemicals, because OPs can cause adverse physiological effects at concentrations that do not affect AChE activity. Carboxylesterases are a related family of enzymes that have higher affinity than AChE for some OPs and carbamates and may be more sensitive indicators of environmental exposure to these pesticides. In this study, carboxylesterase and AChE activity, cytochrome P4501A (CYP1A) protein levels, and mortality were measured in individual juvenile Chinook salmon (Oncorhynchus tshawytscha) following exposure to an OP (chlorpyrifos) and a pyrethroid (esfenvalerate). As expected, high doses of chlorpyrifos and esfenvalerate were acutely toxic, with nominal concentrations (100 and 1 ??g/l, respectively) causing 100% mortality within 96 h. Exposure to chlorpyrifos at a high dose (7.3 ??g/l), but not a low dose (1.2 ??g/l), significantly inhibited AChE activity in both brain and muscle tissue (85% and 92% inhibition, respectively), while esfenvalerate exposure had no effect. In contrast, liver carboxylesterase activity was significantly inhibited at both the low and high chlorpyrifos dose exposure (56% and 79% inhibition, respectively), while esfenvalerate exposure still had little effect. The inhibition of carboxylesterase activity at levels of chlorpyrifos that did not affect AChE activity suggests that some salmon carboxylesterase isozymes may be more sensitive than AChE to inhibition by OPs. CYP1A protein levels were ???30% suppressed by chlorpyrifos exposure at the high dose, but esfenvalerate had no effect. Three teleost species, Chinook salmon, medaka (Oryzias latipes) and Sacramento splittail (Pogonichthys macrolepidotus), were examined for their ability to hydrolyze a series of pyrethroid surrogate substrates and in all cases hydrolysis activity was

  8. Influence of Incision Location on Transmitter Loss, Healing, Incision Lengths, Suture Retention, and Growth of Juvenile Chinook Salmon

    Energy Technology Data Exchange (ETDEWEB)

    Panther, Jennifer L.; Brown, Richard S.; Gaulke, Greggory L.; Woodley, Christa M.; Deters, Katherine A.

    2010-05-11

    In this study, conducted by Pacific Northwest National Laboratory for the U.S. Army Corps of Engineers, Portland District, we measured differences in survival and growth, incision openness, transmitter loss, wound healing, and erythema among abdominal incisions on the linea alba, lateral and parallel to the linea alba (muscle-cutting), and following the underlying muscle fibers (muscle-sparing). A total of 936 juvenile Chinook salmon were implanted with both Juvenile Salmon Acoustic Tracking System transmitters (0.43 g dry) and passive integrated transponder tags. Fish were held at 12°C (n = 468) or 20°C (n = 468) and examined once weekly over 98 days. We found survival and growth did not differ among incision groups or between temperature treatment groups. Incisions on the linea alba had less openness than muscle-cutting and muscle-sparing incisions during the first 14 days when fish were held at 12°C or 20°C. Transmitter loss was not different among incision locations by day 28 when fish were held at 12°C or 20°C. However, incisions on the linea alba had greater transmitter loss than muscle-cutting and muscle-sparing incisions by day 98 at 12°C. Results for wound closure and erythema differed among temperature groups. Results from our study will be used to improve fish-tagging procedures for future studies using acoustic or radio transmitters.

  9. Enhanced Orographic Tropical Rainfall: An Study of the Colombia's rainfall

    Science.gov (United States)

    Peñaranda, V. M.; Hoyos Ortiz, C. D.; Mesa, O. J.

    2015-12-01

    Convection in tropical regions may be enhanced by orographic barriers. The orographic enhancement is an intensification of rain rates caused by the forced lifting of air over a mountainous structure. Orographic heavy rainfall events, occasionally, comes along by flooding, debris flow and substantial amount of looses, either economics or human lives. Most of the heavy convective rainfall events, occurred in Colombia, have left a lot of victims and material damages by flash flooding. An urgent action is required by either scientific communities or society, helping to find preventive solutions against these kind of events. Various scientific literature reports address the feedback process between the convection and the local orographic structures. The orographic enhancement could arise by several physical mechanism: precipitation transport on leeward side, convection triggered by the forcing of air over topography, the seeder-feeder mechanism, among others. The identification of the physical mechanisms for orographic enhancement of rainfall has not been studied over Colombia. As far as we know, orographic convective tropical rainfall is just the main factor for the altitudinal belt of maximum precipitation, but the lack of detailed hydro-meteorological measurements have precluded a complete understanding of the tropical rainfall in Colombia and its complex terrain. The emergence of the multifractal theory for rainfall has opened a field of research which builds a framework for parsimonious modeling of physical process. Studies about the scaling behavior of orographic rainfall have found some modulating functions between the rainfall intensity probability distribution and the terrain elevation. The overall objective is to advance in the understanding of the orographic influence over the Colombian tropical rainfall based on observations and scaling-analysis techniques. We use rainfall maps, weather radars scans and ground-based rainfall data. The research strategy is

  10. Behavior patterns and fates of adult steelhead, Chinook salmon, and coho salmon released into the upper Cowlitz River Basin, 2005–09 and 2012, Washington

    Science.gov (United States)

    Kock, Tobias J.; Ekstrom, Brian K.; Liedtke, Theresa L.; Serl, John D.; Kohn, Mike

    2016-08-26

    A multiyear radiotelemetry evaluation was conducted to monitor adult steelhead (Oncorhynchus mykiss), Chinook salmon (O. tshawytscha), and coho salmon (O. kisutch) behavior and movement patterns in the upper Cowlitz River Basin. Volitional passage to this area was eliminated by dam construction in the mid-1960s, and a reintroduction program began in the mid-1990s. Fish are transported around the dams using a trap-and-haul program, and adult release sites are located in Lake Scanewa, the uppermost reservoir in the system, and in the Cowlitz and Cispus Rivers. Our goal was to estimate the proportion of tagged fish that fell back downstream of Cowlitz Falls Dam before the spawning period and to determine the proportion that were present in the Cowlitz and Cispus Rivers during the spawning period. Fallback is important because Cowlitz Falls Dam does not have upstream fish passage, so fish that pass the dam are unable to move back upstream and spawn. A total of 2,051 steelhead and salmon were tagged for the study, which was conducted during 2005–09 and 2012, and 173 (8.4 percent) of these regurgitated their transmitter prior to, or shortly after release. Once these fish were removed from the dataset, the final number of fish that was monitored totaled 1,878 fish, including 647 steelhead, 770 Chinook salmon, and 461 coho salmon.Hatchery-origin (HOR) and natural-origin (NOR) steelhead, Chinook salmon, and coho salmon behaved differently following release into Lake Scanewa. Detection records showed that the percentage of HOR fish that moved upstream and entered the Cowlitz River or Cispus River after release was relatively low (steelhead = 38 percent; Chinook salmon = 67 percent; coho salmon = 41 percent) compared to NOR fish (steelhead = 84 percent; Chinook salmon = 82 percent; coho salmon = 76 percent). The elapsed time from release to river entry was significantly lower for NOR fish than for HOR fish for all three species. Tagged fish entered the Cowlitz River in

  11. Captive Rearing Program for Salmon River Chinook Salmon : Project Progress Report, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Venditti, David A.

    2003-10-01

    During 2001, the Idaho Department of Fish and Game continued to develop techniques to rear chinook salmon Oncorhynchus tshawytscha to sexual maturity in captivity and to monitor their reproductive performance under natural conditions. Eyed-eggs were hydraulically collected from redds in the East Fork Salmon River (EFSR; N = 311) and the West Fork Yankee Fork Salmon River (WFYF; N = 272) to establish brood year 2001 culture cohorts. The eyed-eggs were incubated and reared by family group at the Eagle Fish Hatchery (Eagle). Juveniles collected the previous summer were PIT and elastomer tagged and vaccinated against vibrio Vibrio spp. and bacterial kidney disease prior to the majority of them being transferred to the National Marine Fisheries Service, Manchester Marine Experimental Station for saltwater rearing through maturity. Smolt transfers included 210 individuals from the Lemhi River (LEM), 242 from the WFYF, and 178 from the EFSR. Maturing fish transfers from Manchester to Eagle included 62 individuals from the LEM, 72 from the WFYF, and 27 from the EFSR. Additional water chilling capacity was added at Eagle in 2001 to test if spawn timing could be advanced by temperature manipulations, and adults from the LEM and WFYF were divided into chilled ({approx} 9 C) and ambient ({approx} 13.5 C) water temperature groups while at Eagle. Twenty-five mature females from the LEM (11 chilled, 14 ambient) were spawned in captivity with 23 males with the same temperature history in 2001. Water temperature group was not shown to affect the spawn timing of these females, but males did mature earlier. Egg survival to the eyed stage of development averaged 37.9% and did not differ significantly between the two temperature groups. A total of 8,154 eyed-eggs from these crosses were placed in in-stream incubators by personnel from the Shoshone-Bannock Tribe. Mature adults (N = 89) were released into the WFYF to evaluate their reproductive performance. After release, fish

  12. FTIR Study of Enhanced Polymeric Blend Membrane with Amines

    Directory of Open Access Journals (Sweden)

    Asim Mushtaq

    2014-03-01

    Full Text Available In this study, research will be carried out to identify the functional group behavior of glassy and rubbery polymeric blend membrane with amines. Polymeric blend membranes with different blending ratios were prepared and the developed membranes were characterized by FTIR to see the effect of blend ratio on different functional groups. The developed membranes are flat dense sheet membrane of 20% wt/wt. The pure and blend membrane polysulfone, polyethersulfone, polyvinyl acetate with different composition, with 10% methyl diethanol amine, mono ethanol amine, diethanol amine are developed with dimethyl acetamide solvent. Fourier Transform Infrared (FTIR spectroscopy was utilized to study the interaction between two polymers and to analyze the type of bonding present. To observed frequencies were assigned to various mode of vibration in terms of fundamentals and combination. These spectral changes indicated the existence of molecular interaction among the enhanced polymeric blends; highlight the compatible nature among each other.

  13. Estimating Common Growth Patterns in Juvenile Chinook Salmon (Oncorhynchus tshawytscha) from Diverse Genetic Stocks and a Large Spatial Extent

    Science.gov (United States)

    Scheuerell, Mark D.; Simenstad, Charles A.; Bottom, Daniel L.

    2016-01-01

    Life history variation in Pacific salmon (Oncorhynchus spp.) supports species resilience to natural disturbances and fishery exploitation. Within salmon species, life-history variation often manifests during freshwater and estuarine rearing, as variation in growth. To date, however, characterizing variability in growth patterns within and among individuals has been difficult via conventional sampling methods because of the inability to obtain repeated size measurements. In this study we related otolith microstructures to growth rates of individual juvenile Chinook salmon (O. tshawytscha) from the Columbia River estuary over a two-year period (2010–2012). We used dynamic factor analysis to determine whether there were common patterns in growth rates within juveniles based on their natal region, capture location habitat type, and whether they were wild or of hatchery origin. We identified up to five large-scale trends in juvenile growth rates depending on month and year of capture. We also found that hatchery fish had a narrower range of trend loadings for some capture groups, suggesting that hatchery fish do not express the same breadth of growth variability as wild fish. However, we were unable to resolve a relationship between specific growth patterns and habitat transitions. Our study exemplifies how a relatively new statistical analysis can be applied to dating or aging techniques to summarize individual variation, and characterize aspects of life history diversity. PMID:27695094

  14. Study of Valproic Acid-Enhanced Hepatocyte Steatosis

    Directory of Open Access Journals (Sweden)

    Renin Chang

    2016-01-01

    Full Text Available Valproic acid (VPA is one of the most widely used antiepilepsy drugs. However, several side effects, including weight gain and fatty liver, have been reported in patients following VPA treatment. In this study, we explored the molecular mechanisms of VPA-induced hepatic steatosis using FL83B cell line-based in vitro model. Using fluorescent lipid staining technique, we found that VPA enhanced oleic acid- (OLA- induced lipid accumulation in a dose-dependent manner in hepatocytes; this may be due to upregulated lipid uptake, triacylglycerol (TAG synthesis, and lipid droplet formation. Real-time PCR results showed that, following VPA treatment, the expression levels of genes encoding cluster of differentiation 36 (Cd36, low-density lipoprotein receptor-related protein 1 (Lrp1, diacylglycerol acyltransferase 2 (Dgat2, and perilipin 2 (Plin2 were increased, that of carnitine palmitoyltransferase I a (Cpt1a was not affected, and those of acetyl-Co A carboxylase α (Acca and fatty acid synthase (Fasn were decreased. Furthermore, using immunofluorescence staining and flow cytometry analyses, we found that VPA also induced peroxisome proliferator-activated receptor γ (PPARγ nuclear translocation and increased levels of cell-surface CD36. Based on these results, we propose that VPA may enhance OLA-induced hepatocyte steatosis through the upregulation of PPARγ- and CD36-dependent lipid uptake, TAG synthesis, and lipid droplet formation.

  15. John Day Basin Spring Chinook Salmon Escapement and Productivity Monitoring; Fish Research Project Oregon, 2000-2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Carmichael, Richard W.; Claire, Glenda M.; Seals, Jason

    2002-01-01

    The four objectives of this report are: (1) Estimate annual spawner escapement and number of spring chinook salmon redds in the John Day River basin; (2) Determine sex ratio, age composition, length-at-age of spawners, and proportion of natural spawners that are hatchery origin strays; (3) Determine adequacy of historic index surveys for indexing spawner abundance and for detecting changes in spawner distribution through time; and (4) Estimate smolt-to-adult survival for spring chinook salmon emigrating from the John Day River basin.

  16. Students’ Motivations for Social Media Enhanced Studying and Learning

    Directory of Open Access Journals (Sweden)

    Kirsi Silius

    2010-03-01

    Full Text Available Solutions of social media enhanced learning are widely studied in Hypermedia Laboratory at Tampere University of Technology (TUT. In recent years Web 2.0 based social media services (e.g., Facebook®, LinkedIn®, Last.fm®, etc. have become popular, especially among young people. Based on this phenomenon TUT Hypermedia researchers have developed a social networking site for TUT freshmen aiming to provide convenient tools for interaction and study support. The first idea was to offer a free-of-charge social web site in the context of learning Basic Engineering Mathematics at TUT. This was thought to be an efficient tool to get new students studies off to a good start as mathematics courses play a significant role. However, the prediction failed, which caused us to study students‟ motivations for social network site usage in the study context. This paper describes research conducted in 2009. Moreover, a description of subsequent measures accomplished (e.g., web site development and social network analysis at TUT is included.

  17. Effects of Coded-Wire Tagging on the Survival of Spring Chinook Salmon : Annual Report FY 1990-1991.

    Energy Technology Data Exchange (ETDEWEB)

    Blankenship, H. Lee; Volk, Eric

    1991-09-01

    The second study year encompassed similar activities to the first, with some modification. In terms of otolith marking, all spring chinook at each facility were marked by a series of scheduled incubation water depressions. Modifications to our work plan included a somewhat later initiation of otolith marking, a shortening of cold water exposure duration for Cowlitz fish at the alevin stage, and the use of on-station personnel for conducting actual water manipulations for otolith marking. Protocols for efficient computerized collection of otolith band data were established and exploratory data collections initiated. Most of this was aimed at documentation of variability in the induced otolith pattern as a result of measurement technique and inherent biological variation in growth rates of individual otoliths. When fish has reached their appropriate size, Coded-Wire Tags were applied in specific proportions to untagged fish at each hatchery, and all untagged fish were electronically counted. Separate tag codes were applied to groups representing various rearing or release strategies at each hatchery. 11 refs., 3 tabs.

  18. The influence of hydrology and waterway distance on population structure of Chinook salmon Oncorhynchus tshawytscha in a large river.

    Science.gov (United States)

    Olsen, J B; Beacham, T D; Wetklo, M; Seeb, L W; Smith, C T; Flannery, B G; Wenburg, J K

    2010-04-01

    Adult Chinook salmon Oncorhynchus tshawytscha navigate in river systems using olfactory cues that may be influenced by hydrologic factors such as flow and the number, size and spatial distribution of tributaries. Thus, river hydrology may influence both homing success and the level of straying (gene flow), which in turn influences population structure. In this study, two methods of multivariate analysis were used to examine the extent to which four indicators of hydrology and waterway distance explained population structure of O. tshawytscha in the Yukon River. A partial Mantel test showed that the indicators of hydrology were positively associated with broad-scale (Yukon basin) population structure, when controlling for the influence of waterway distance. Multivariate multiple regression showed that waterway distance, supplemented with the number and flow of major drainage basins, explained more variation in broad-scale population structure than any single indicator. At an intermediate spatial scale, indicators of hydrology did not appear to influence population structure after accounting for waterway distance. These results suggest that habitat changes in the Yukon River, which alter hydrology, may influence the basin-wide pattern of population structure in O. tshawytscha. Further research is warranted on the role of hydrology in concert with waterway distance in influencing population structure in Pacific salmon.

  19. Intracochlear Bleeding Enhances Cochlear Fibrosis and Ossification: An Animal Study.

    Directory of Open Access Journals (Sweden)

    Kyeung A Ryu

    Full Text Available The aim of this study was to investigate the effects of intracochlear bleeding during cochleostomy on cochlear inflammatory response and residual hearing in a guinea pig animal model. Auditory brainstem response threshold shifts were greater in blood injected ears (p<0.05. Interleukin-1β, interleukin-10, tumor necrosis factor-α and nitric oxide synthase 2, cytokines that are related to early stage inflammation, were significantly increased in blood injected ears compared to normal and cochleostomy only ears at 1 day after surgery; with the increased IL-1β being sustained until 3 days after the surgery (p<0.05. Hair cells were more severely damaged in blood injected ears than in cochleostomy only ears. Histopathologic examination revealed more extensive fibrosis and ossification in blood injected ears than cochleostomy only ears. These results show that intracochlear bleeding enhanced cochlear inflammation resulting in increased fibrosis and ossification in an experimental animal model.

  20. Concentrative meditation enhances preattentive processing: a mismatch negativity study.

    Science.gov (United States)

    Srinivasan, Narayanan; Baijal, Shruti

    2007-10-29

    The mismatch negativity (MMN) paradigm that is an indicator of preattentive processing was used to study the effects of concentrative meditation. Sudarshan Kriya Yoga meditation is a yogic exercise practiced in an ordered sequence beginning with breathing exercises, and ending with concentrative (Sahaj Samadhi) meditation. Auditory MMN waveforms were recorded at the beginning and after each of these practices for meditators, and equivalently after relaxation sessions for the nonmeditators. Overall meditators were found to have larger MMN amplitudes than nonmeditators. The meditators also exhibited significantly increased MMN amplitudes immediately after meditation suggesting transient state changes owing to meditation. The results indicate that concentrative meditation practice enhances preattentive perceptual processes, enabling better change detection in auditory sensory memory.

  1. Surface enhanced raman spectroscopy studies on triglycine sulphate single crystals

    Science.gov (United States)

    Parameswari, A.; Mohamed Asath, R.; Premkumar, R.; Milton Franklin Benial, A.

    2017-01-01

    Adsorption characteristics of triglycine sulphate (TGS) on silver (Ag) surface were investigated based on density functional theory calculations and surface enhanced Raman spectroscopy (SERS) technique. The single crystals of TGS were grown by slow evaporation method. Ag nanoparticles (Ag NPs) were prepared by solution combustion method and characterized. The calculated and observed structural parameters of TGS molecule were compared. Raman and SERS spectra for TGS single crystal were studied experimentally and validated theoretically. Frontier molecular orbitals (FMOs) analysis was carried out for TGS and TGS adsorbed on Ag surface. The second harmonic generation measurements confirm the nonlinear optical (NLO) activity of the TGS molecule. SERS spectral analysis reveals that the TGS adsorbed as tilted orientation on the silver surface. The theoretical and experimental results evidence the suitability of the grown TGS single crystal for optoelectronic applications.

  2. Feasibility Study: Potential Enhancements for the LLNL Renewables Website

    Energy Technology Data Exchange (ETDEWEB)

    Kearns, F; Krawchuk, M; Moritz, M; Stephens, S; Goldstein, N

    2008-01-25

    This feasibility study investigates additional improvements/extensions to the LLNL Renewables Website. Currently, the Renewables Website focuses on wind energy in California. Future enhancements will include other renewable energy sources. The extensions described below are focused along two separate yet related avenues: (1) Forecasting wildfire risk in the regions of California where new development may occur, as a part of the 'Million Solar Roofs' program. (2) Gaining a better understanding of the ecological components and potential of biofuels from forests in California. These two avenues are further described in the report. Following is a technical description of the Center for Fire Research and Outreach computing and web service capabilities.

  3. Coronary ligation reduces maximum sustained swimming speed in Chinook salmon, Oncorhynchus tshawytscha

    DEFF Research Database (Denmark)

    Farrell, A P; Steffensen, J F

    1987-01-01

    The maximum aerobic swimming speed of Chinook salmon (Oncorhynchus tshawytscha) was measured before and after ligation of the coronary artery. Coronary artery ligation prevented blood flow to the compact layer of the ventricular myocardium, which represents 30% of the ventricular mass, and produced...... a statistically significant 35.5% reduction in maximum swimming speed. We conclude that the coronary circulation is important for maximum aerobic swimming and implicit in this conclusion is that maximum cardiac performance is probably necessary for maximum aerobic swimming performance....

  4. Tucannon River Spring Chinook Salmon Captive Brood Program, FY 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Bumgarner, Joseph D.; Gallinat, Michael P.

    2001-06-01

    This report summarizes the objectives, tasks, and accomplishments of the Tucannon River spring chinook captive brood program from program inception (1997) through April 2001. The WDFW initiated a captive broodstock program in 1997. The overall goal of the Tucannon River captive broodstock program is for the short-term, and eventually long-term, rebuilding of the Tucannon River spring chinook salmon run, with the hope that natural production will eventually sustain itself. The project goal is to rear captive salmon to adults, spawn them, rear their progeny, and release approximately 150,000 smolts annually into the Tucannon River between 2003-2007. These smolt releases, in combination with the current hatchery supplementation program (132,000 smolts), and wild production, is expected to produce 600-700 returning adult spring chinook to the Tucannon River each year from 2005-2010. The Master Plan, Environmental Assessment, and most facility modifications at LFH were completed for the Tucannon River spring chinook captive broodstock program during FY2000 and FY2001. DNA samples collected since 1997 have been sent to the WDFW genetics lab in Olympia for baseline DNA analysis. Results from the genetic analysis are not available at this time. The captive broodstock program is planned to collect fish from five (1997-2001) brood years (BY). The captive broodstock program was initiated with 1997 BY juveniles, and the 2000 BY fish have been selected. As of April 30, 2001, WDFW has 172 BY 1997, 262 BY 1998, 407 BY 1999, and approximately 1,190 BY 2000 fish on hand at LFH. Twelve of 13 mature 97 BY females were spawned in 2000. Total eggtake was 14,813. Mean fecundity was 1,298 eggs/female based on 11 fully spawned females. Egg survival to eye-up was 47.3%. This low survival was expected for three year old captive broodstock females. As of April 30, 2001, WDFW has 4,211 captive broodstock progeny on hand. These fish will be tagged with blank wire tag without fin clips and

  5. Investigations of Bull Trout (Salvelinus Confluentus), Steelhead Trout (Oncorhynchus Mykiss), and Spring Chinook Salmon (O. Tshawytscha) Interactions in Southeast Washington Streams. Final Report 1992.

    Energy Technology Data Exchange (ETDEWEB)

    Underwood, Keith D.

    1995-01-01

    The goal of this two year study was to determine if supplementation with hatchery reared steelhead trout (Oncorhynchus mykiss) and spring chinook salmon (O. tshawytscha) negatively impacted wild native bull trout (Salvelinus confluentus) through competitive interactions. Four streams with varying levels of fish supplementation activity were sampled in Southeast Washington. Tasks performed during this study were population density, relative abundance, microhabitat utilization, habitat availability, diet analysis, bull trout spawning ground surveys, radio telemetry of adult bull trout, and growth analysis. Results indicate that bull trout overlapped geographically with the supplemented species in each of the study streams suggesting competition among species was possible. Within a stream, bull trout and the supplemented species utilized dissimilar microhabitats and microhabitat utilization by each species was the same among streams suggesting that there was no shifts in microhabitat utilization among streams. The diet of bull trout and O. mykiss significantly overlapped in each of the study streams. The stream most intensely supplemented contained bull trout with the slowest growth and the non-supplemented stream contained bull trout with the fastest growth. Conversely, the stream most intensely supplemented contain steelhead with the fastest growth and the non-supplemented stream contained steelhead with the slowest growth. Growth indicated that bull trout may have been negatively impacted from supplementation, although other factors may have contributed. At current population levels, and current habitat quantity and quality, no impacts to bull trout as a result of supplementation with hatchery reared steelhead trout and spring chinook salmon were detected. Project limitations and future research recommendations are discussed.

  6. Study on analysis of ionic wind for heat transfer enhancement .

    Science.gov (United States)

    Ko, Han Seo; Shin, Dong Ho

    2016-11-01

    Local heat transfer technology was investigated using ionic wind generation in this study. Characteristics of ionic wind using wire and plate electrodes were studied by experimental and numerical methods. A particle image velocitimetry (PIV) test was conducted for a study of a boundary layer controlled by the ionic wind on the heated surface in the wind tunnel. It was found that the coulombic force consistently acted on the surface to reduce the effect of the viscous boundary layer. The boundary layer was formed on the heated surface and controlled by the ionic wind regardless of the Reynolds number of the bulk flow. The heat transfer coefficient increased and decreased, 11% and 19% in average on the heated surface by the ionic wind, for the condition of lower (100 200) and higher (2500 3500) Reynolds numbers of the bulk flow, respectively. It was concluded that the ionic wind can be used for enhancing the convection heat transfer rate or insulating the local surface according to its operating condition. The results of the local heat transfer controlled by the ionic wind were applied for the heat exchanger and the performance was confirmed by the experimental and numerical methods.

  7. Enhanced Soundings for Local Coupling Studies Field Campaign Report

    Energy Technology Data Exchange (ETDEWEB)

    Ferguson, Craig R [University at Albany, State University of New York; Santanello, Joseph A [NASA Goddard Space Flight Center (GSFC), Greenbelt, MD (United States); Gentine, Pierre [Columbia Univ., New York, NY (United States)

    2016-04-01

    This document presents initial analyses of the enhanced radiosonde observations obtained during the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Climate Research Facility Enhanced Soundings for Local Coupling Studies Field Campaign (ESLCS), which took place at the ARM Southern Great Plains (SGP) Central Facility (CF) from June 15 to August 31, 2015. During ESLCS, routine 4-times-daily radiosonde measurements at the ARM-SGP CF were augmented on 12 days (June 18 and 29; July 11, 14, 19, and 26; August 15, 16, 21, 25, 26, and 27) with daytime 1-hourly radiosondes and 10-minute ‘trailer’ radiosondes every 3 hours. These 12 intensive operational period (IOP) days were selected on the basis of prior-day qualitative forecasts of potential land-atmosphere coupling strength. The campaign captured 2 dry soil convection advantage days (June 29 and July 14) and 10 atmospherically controlled days. Other noteworthy IOP events include: 2 soil dry-down sequences (July 11-14-19 and August 21-25-26), a 2-day clear-sky case (August 15-16), and the passing of Tropical Storm Bill (June 18). To date, the ESLCS data set constitutes the highest-temporal-resolution sampling of the evolution of the daytime planetary boundary layer (PBL) using radiosondes at the ARM-SGP. The data set is expected to contribute to: 1) improved understanding and modeling of the diurnal evolution of the PBL, particularly with regard to the role of local soil wetness, and (2) new insights into the appropriateness of current ARM-SGP CF thermodynamic sampling strategies.

  8. Performance Assessment of Bi-Directional Knotless Tissue-Closure Device in Juvenile Chinook Salmon Surgically Implanted with Acoustic Transmitters, 2010 - Final Report

    Energy Technology Data Exchange (ETDEWEB)

    Woodley, Christa M.; Bryson, Amanda J.; Carpenter, Scott M.; Knox, Kasey M.; Gay, Marybeth E.; Wagner, Katie A.

    2012-09-10

    In 2010, researchers at Pacific Northwest National Laboratory (PNNL) and the University of Washington (UW) conducted a compliance monitoring study—the Lower Columbia River Acoustic Transmitter Investigations of Dam Passage Survival and Associated Metrics 2010 (Carlson et al. in preparation)—for the U.S. Army Corps of Engineers (USACE), Portland District. The purpose of the compliance study was to evaluate juvenile Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) passage routes and survival through the lower three Columbia River hydroelectric facilities as stipulated by the 2008 Federal Columbia River Power System (FCRPS) Biological Opinion (BiOp; NOAA Fisheries 2008) and the Columbia Basin Fish Accords (Fish Accords; 3 Treaty Tribes and Action Agencies 2008).

  9. Tissue-specific induction of Hsp90 mRNA and plasma cortisol response in chinook salmon following heat shock, seawater challenge, and handling challenge

    Science.gov (United States)

    Palmisano, Aldo N.; Winton, J.R.; Dickhoff, Walton W.

    2000-01-01

    In studying the whole-body response of chinook salmon (Oncorhynchus tshawytscha) to various stressors, we found that 5-hour exposure to elevated temperature (mean 21.6??C; + 10.6??C over ambient) induced a marked increase in Hsp90 messenger RNA accumulation in heart, brain, gill, muscle, liver, kidney, and tail fin tissues. The most vital tissues (heart, brain, gill, and muscle) showed the greatest Hsp90-mRNA response, with heart tissue increasing approximately 35-fold, Heat shock induced no increase in plasma cortisol. In contrast, a standard handling challenge induced high plasma cortisol levels, but no elevation in Hsp90 mRNA in any tissue, clearly separating the physiological and cellular stress responses. We saw no increase either in tissue Hsp90 mRNA levels or in plasma cortisol concentrations after exposing the fish to seawater overnight.

  10. Interaction of magnetic resonators studied by the magnetic field enhancement

    Science.gov (United States)

    Hou, Yumin

    2013-12-01

    It is the first time that the magnetic field enhancement (MFE) is used to study the interaction of magnetic resonators (MRs), which is more sensitive than previous parameters-shift and damping of resonance frequency. To avoid the coherence of lattice and the effect of Bloch wave, the interaction is simulated between two MRs with same primary phase when the distance is changed in the range of several resonance wavelengths, which is also compared with periodic structure. The calculated MFE oscillating and decaying with distance with the period equal to resonance wavelength directly shows the retardation effect. Simulation also shows that the interaction at normal incidence is sensitive to the phase correlation which is related with retardation effect and is ultra-long-distance interaction when the two MRs are strongly localized. When the distance is very short, the amplitude of magnetic resonance is oppressed by the strong interaction and thus the MFE can be much lower than that of single MR. This study provides the design rules of metamaterials for engineering resonant properties of MRs.

  11. Interaction of magnetic resonators studied by the magnetic field enhancement

    Directory of Open Access Journals (Sweden)

    Yumin Hou

    2013-12-01

    Full Text Available It is the first time that the magnetic field enhancement (MFE is used to study the interaction of magnetic resonators (MRs, which is more sensitive than previous parameters–shift and damping of resonance frequency. To avoid the coherence of lattice and the effect of Bloch wave, the interaction is simulated between two MRs with same primary phase when the distance is changed in the range of several resonance wavelengths, which is also compared with periodic structure. The calculated MFE oscillating and decaying with distance with the period equal to resonance wavelength directly shows the retardation effect. Simulation also shows that the interaction at normal incidence is sensitive to the phase correlation which is related with retardation effect and is ultra-long-distance interaction when the two MRs are strongly localized. When the distance is very short, the amplitude of magnetic resonance is oppressed by the strong interaction and thus the MFE can be much lower than that of single MR. This study provides the design rules of metamaterials for engineering resonant properties of MRs.

  12. Interaction of magnetic resonators studied by the magnetic field enhancement

    Energy Technology Data Exchange (ETDEWEB)

    Hou, Yumin, E-mail: ymhou@pku.edu.cn [State Key Laboratory for Mesoscopic Physics, School of Physics, Peking University, Beijing 100871 (China)

    2013-12-15

    It is the first time that the magnetic field enhancement (MFE) is used to study the interaction of magnetic resonators (MRs), which is more sensitive than previous parameters–shift and damping of resonance frequency. To avoid the coherence of lattice and the effect of Bloch wave, the interaction is simulated between two MRs with same primary phase when the distance is changed in the range of several resonance wavelengths, which is also compared with periodic structure. The calculated MFE oscillating and decaying with distance with the period equal to resonance wavelength directly shows the retardation effect. Simulation also shows that the interaction at normal incidence is sensitive to the phase correlation which is related with retardation effect and is ultra-long-distance interaction when the two MRs are strongly localized. When the distance is very short, the amplitude of magnetic resonance is oppressed by the strong interaction and thus the MFE can be much lower than that of single MR. This study provides the design rules of metamaterials for engineering resonant properties of MRs.

  13. 77 FR 5389 - Fisheries of the Exclusive Economic Zone Off Alaska; Chinook Salmon Bycatch Management in the...

    Science.gov (United States)

    2012-02-03

    ... sectors as well as representatives for the six western Alaska Community Development Quota Program... the Exclusive Economic Zone Off Alaska; Chinook Salmon Bycatch Management in the Bering Sea Pollock Fishery; Economic Data Collection AGENCY: National Marine Fisheries Service (NMFS), National Oceanic...

  14. 77 FR 42629 - Fisheries of the Exclusive Economic Zone Off Alaska; Chinook Salmon Bycatch Management in the...

    Science.gov (United States)

    2012-07-20

    ... to manage the hard caps for Chinook salmon PSC. For the GOA, the data will be more variable and less... effects of the rule fall primarily on a distinct segment of the industry, or portion thereof (e.g., user group, gear type, geographic area), that segment would be considered the universe for purposes of...

  15. Grande Ronde Endemic Spring Chinook Salmon Supplementation Program : Facility Operation and Maintenance Facilities, Annual Report 2003.

    Energy Technology Data Exchange (ETDEWEB)

    McLean, Michael L.; Seeger, Ryan; Hewitt, Laurie (Confederated Tribes of the Umatilla Indian Reservation, Department of Natural Resources, Pendleton, OR)

    2004-01-01

    Anadromous salmonid stocks have declined in both the Grande Ronde River Basin (Lower Snake River Compensation Plan (LSRCP) Status Review Symposium 1998) and in the entire Snake River Basin (Nehlsen et al. 1991), many to the point of extinction. The Grande Ronde River Basin historically supported large populations of fall and spring chinook (Oncorhynchus tshawytscha), sockeye (O. nerka), and coho (O. kisutch) salmon and steelhead trout (O. mykiss) (Nehlsen et al. 1991). The decline of chinook salmon and steelhead populations and extirpation of coho and sockeye salmon in the Grande Ronde River Basin was, in part, a result of construction and operation of hydroelectric facilities, over fishing, and loss and degradation of critical spawning and rearing habitat in the Columbia and Snake River basins (Nehlsen et al. 1991). Hatcheries were built in Oregon, Washington and Idaho under the Lower Snake River Compensation Plan (LSRCP) to compensate for losses of anadromous salmonids due to the construction and operation of the lower four Snake River dams. Lookingglass Hatchery (LGH) on Lookingglass Creek, a tributary of the Grande Ronde River, was completed under LSRCP in 1982 and has served as the main incubation and rearing site for chinook salmon programs for Grande Ronde and Imnaha rivers in Oregon. Despite these hatchery programs, natural spring chinook populations continued to decline resulting in the National Marine Fisheries Service (NMFS) listing Snake River spring/summer chinook salmon as ''threatened'' under the federal Endangered Species Act (1973) on 22 April 1992. Continuing poor escapement levels and declining population trends indicated that Grande Ronde River basin spring chinook salmon were in imminent danger of extinction. These continuing trends led fisheries co-managers in the basin to initiate the Grande Ronde Endemic Spring Chinook Salmon Supplementation Program (GRESCSSP) in order to prevent extinction and preserve options for use of

  16. Food and growth parameters of juvenile chinook in the central Columbia River

    Energy Technology Data Exchange (ETDEWEB)

    Becker, C.D.

    1994-10-01

    Juvenile chinook, salmon (Oncorhynchus tshawytscha) in the Hanford area of the free-flowing central Columbia River, Washington consume almost entirely adult and larval stages of aquatic insects. The diet is dominated by midges (Diptera: Chironomidae). By numbers, adult midges provided 64 and 58% of the diet and larval midges 17 and 18% of the diet, in 1968 and 1969, respectively. The families Hydropsychidae (Trichoptera), Notonectidae (Hemiptera) and Hypogastruridae (Collembola) are of minor numerical importance with a combined utilization of 7% in 1968 and 15% in 1969. Distinctive features of food and feeding activity of juvenile chinook at Hanford are fourfold: (1) the fish utilize relatively few insect groups, predominantly Chironomidae; (2) they depend largely upon autochthonous river organisms; (3) they visually select living prey drifting, floating or swimming in the water; and (4) they are apparently habitat opportunists to a large extent. Analyses were made of variations in diet and numbers of insects consumed between six sampling stations distributed along a 38 km section of the river. Data are provided on feeding intensity, fish lengths, length-weight relationships, and coefficients of condition. Seasonal changes in river temperature and discharge, as well as variations in regulated flow levels are environmental features influencing feeding, growth, and emigration of fish in the Hanford environs.

  17. An Ethical Study on the Uses of Enhancement Genetic Engineering

    Science.gov (United States)

    Kawakita, Koji

    A variety of biomedical technologies are being developed that can be used for purposes other than treating diseases. Such “enhancement technologies” can be used to improve our own and future generation's life-chances. While these technologies can help people in many ways, their use raises important ethical issues. Some arguments for anti-enhancement as well as pro-enhancement seem to rest, however, on shaky foundation. Both company engineers and the general public had better learn more from technological, economical and philosophical histories. For such subjects may provide engineers with less opportunities of technological misuses and more powers of self-esteem in addition to self-control.

  18. Effect of dietary α-tocopherol + ascorbic acid, selenium, and iron on oxidative stress in sub-yearling Chinook salmon (Oncorhynchus tshawytscha Walbaum)

    Science.gov (United States)

    Welker, T.L.; Congleton, J.L.

    2009-01-01

    A three-variable central composite design coupled with surface-response analysis was used to examine the effects of dietary ??-tocopherol + ascorbic acid (TOCAA), selenium (Se), and iron (Fe) on indices of oxidative stress in juvenile spring Chinook salmon. Each dietary factor was tested at five levels for a total of fifteen dietary combinations (diets). Oxidative damage in liver and kidney (lipid peroxidation, protein carbonyls) and erythrocytes (erythrocyte resistance to peroxidative lysis, ERPL) was determined after feeding experimental diets for 16 (early December) and 28 (early March) weeks. Only TOCAA influenced oxidative stress in this study, with most measures of oxidative damage decreasing (liver lipid peroxidation in December and March; ERPL in December; liver protein carbonyl in March) with increasing levels of TOCAA. We also observed a TOCAA-stimulated increase in susceptibility of erythrocytes to peroxidative lysis in March at the highest levels of TOCAA. The data suggest that under most circumstances a progressive decrease in oxidative stress occurs as dietary TOCAA increases, but higher TOCAA concentrations can stimulate oxidative damage in some situations. Higher levels of TOCAA in the diet were required in March than in December to achieve comparable levels of protection against oxidative damage, which may have been due to physiological changes associated with the parr-smolt transformation. Erythrocytes appeared to be more sensitive to variation in dietary levels of TOCAA than liver and kidney tissues. Using the March ERPL assay results as a baseline, a TOCAA level of approximately 350-600 mg/kg diet would provide adequate protection against lipid peroxidation under most circumstances in juvenile Chinook salmon. ?? 2008 The Authors.

  19. Monitoring and Evaluation of Yearling Fall Chinook Salmon (Oncorhynchus tshawytscha) Released from Acclimation Facilities Upstream of Lower Granite Dam; 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rocklage, Stephen J.; Kellar, Dale S. (Nez Perce Tribe, Department of Fisheries Resource Management, ID)

    2005-07-01

    The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fall Chinook salmon Oncorhynchus tshawytscha that were acclimated and released at three Fall Chinook Acclimation Project sites upstream of Lower Granite Dam along with yearlings released on-station from Lyons Ferry Hatchery in 2001. This was the sixth year of a long-term project to supplement natural spawning populations of Snake River stock fall Chinook salmon upstream of Lower Granite Dam. The 318,932 yearlings released from the Fall Chinook Acclimation Project facilities were short of the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 7,503 PIT tagged yearlings from Pittsburg Landing, 7,499 from Big Canyon and 2,518 from Captain John Rapids. The Washington Department of Fish and Wildlife released 991 PIT tagged yearlings from Lyons Ferry Hatchery. Fish health sampling indicated that, overall, bacterial kidney disease levels could be considered relatively low. Compared to prior years, Quantitative Health Assessment Indices were relatively low at Big Canyon and Captain John Rapids and about average at Pittsburg Landing and Lyons Ferry Hatchery. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 155.4 mm (154.7-156.1 mm) at Captain John Rapids to 171.6 mm (170.7-172.5 mm) at Lyons Ferry Hatchery. Mean condition factors ranged from 1.02 at Lyons Ferry Hatchery to 1.16 at Big Canyon and Captain John Rapids. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 74.4% (73.2-75.5%) for Big Canyon to 85.2% (83.5-87.0%) for Captain John Rapids. Estimated survival from release

  20. Monitoring and Evaluation of Yearling Fall Chinook Salmon (Oncorhynchus tshawytscha) Released from Acclimation Facilities Upstream of Lower Granite Dam; 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rocklage, Stephen J.; Kellar, Dale S. (Nez Perce Tribe, Department of Fisheries Resource Management, ID)

    2005-07-01

    The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fall Chinook salmon Oncorhynchus tshawytscha that were acclimated and released at three Fall Chinook Acclimation Project sites upstream of Lower Granite Dam along with yearlings released on-station from Lyons Ferry Hatchery in 2000. This was the fifth year of a long-term project to supplement natural spawning populations of Snake River stock fall Chinook salmon upstream of Lower Granite Dam. The 397,339 yearlings released from the Fall Chinook Acclimation Project facilities were short of the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 7,477 PIT tagged yearlings from Pittsburg Landing, 7,421 from Big Canyon and 2,488 from Captain John Rapids. The Washington Department of Fish and Wildlife released 980 PIT tagged yearlings from Lyons Ferry Hatchery. Fish health sampling indicated that, overall, bacterial kidney disease levels could be considered relatively low. Compared to prior years, Quantitative Health Assessment Indices were relatively low at Big Canyon and Captain John Rapids and about average at Pittsburg Landing and Lyons Ferry Hatchery. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 157.7 mm (157.3-158.1 mm) at Big Canyon to 172.9 mm (172.2-173.6 mm) at Captain John Rapids. Mean condition factors ranged from 1.06 at Captain John Rapids and Lyons Ferry Hatchery to 1.12 at Big Canyon. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 87.0% (84.7-89.4%) for Pittsburg Landing to 95.2% (91.5-98.9%) for Captain John Rapids. Estimated survival from release to

  1. Monitoring and Evaluation of Yearling Fall Chinook Salmon (Oncorhynchus tshawytscha) Released from Acclimation Facilities Upstream of Lower Granite Dam; 1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rocklage, Stephen J.; Kellar, Dale S. (Nez Perce Tribe, Department of Fisheries Resource Management, ID)

    2005-07-01

    The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fall Chinook salmon Oncorhynchus tshawytscha that were acclimated and released at three Fall Chinook Acclimation Project (FCAP) sites upstream of Lower Granite Dam along with yearlings released on-station from Lyons Ferry Hatchery in 1999. This was the fourth year of a long-term project to supplement natural spawning populations of Snake River stock fall Chinook salmon upstream of Lower Granite Dam. The 453,117 yearlings released from the Fall Chinook Acclimation Project facilities not only slightly exceeded the 450,000 fish quota, but a second release of 76,386 yearlings (hereafter called Surplus) were acclimated at the Big Canyon facility and released about two weeks after the primary releases. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 9,941 PIT tagged yearlings from Pittsburg Landing, 9,583 from Big Canyon, 2,511 Big Canyon Surplus and 2,494 from Captain John Rapids. The Washington Department of Fish and Wildlife released 983 PIT tagged yearlings from Lyons Ferry Hatchery. Fish health sampling indicated that, overall, bacterial kidney disease levels could be considered relatively low and did not appear to increase after transport to the acclimation facilities. Compared to prior years, Quantitative Health Assessment Indices were relatively low at Pittsburg Landing and Lyons Ferry Hatchery and relatively high at Big Canyon and Captain John Rapids. Mean fork lengths (95% confidence interval) of the release groups ranged from 147.4 mm (146.7-148.1 mm) at Captain John Rapids to 163.7 mm (163.3-164.1 mm) at Pittsburg Landing. Mean condition factors ranged from 1.04 at

  2. Monitoring and Evaluation of Yearling Fall Chinook Salmon (Oncorhynchus tshawytscha) Released from Acclimation Facilities Upstream of Lower Granite Dam; 2004 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rocklage, Stephen J. Nez Perce Tribe, Department of Fisheries Resource Management, Lapawi, ID)

    2005-07-01

    The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fall Chinook salmon Oncorhynchus tshawytscha that were acclimated and released at three Fall Chinook Acclimation Project (FCAP) sites upstream of Lower Granite Dam in 2004. This was the ninth year of a long-term project to supplement natural spawning populations of Snake River stock fall Chinook salmon upstream of Lower Granite Dam. The 414,452 yearlings released from the Fall Chinook Acclimation Project facilities were short of the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 4,983 PIT tagged yearlings from Pittsburg Landing, 4,984 from Big Canyon and 4,982 from Captain John Rapids. Fish health sampling indicated that, overall, bacterial kidney disease levels could be considered low with 53-94% rating not detected to low. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 154.6 mm (154.0-155.2 mm) at Pittsburg Landing to 163.0 mm (162.6-163.4 mm) at Captain John Rapids. Mean condition factors ranged from 1.06 at Lyons Ferry Hatchery to 1.16 at Big Canyon. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 74.7% (72.9-76.5%) for Big Canyon to 88.1% (85.7-90.6%) for Captain John Rapids. Estimated survival from release to McNary Dam ranged from 45.3% (39.2-51.5%) for Pittsburg Landing to 52.1% (42.9-61.2%) for Big Canyon. Median migration rates to Lower Granite Dam, based on all observations of PIT tagged yearlings from the FCAP facilities, ranged from 5.5 river kilometers per day (rkm/d) for Captain John Rapids to 12.8 rkm/d for Pittsburg Landing. Median migration

  3. Monitoring and Evaluation of Yearling Fall Chinook Salmon (Oncorhynchus tshawytscha) Released from Acclimation Facilities Upstream of Lower Granite Dam; 2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rocklage, Stephen J. (Nez Perce Tribe, Department of Fisheries Resource Management, Lapwai, ID)

    2005-07-01

    The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery reared yearling fall Chinook salmon Oncorhynchus tshawytscha that were acclimated and released at three Fall Chinook Acclimation Project (FCAP) sites upstream of Lower Granite Dam in 2003. This was the eighth year of a long-term project to supplement natural spawning populations of Snake River stock fall Chinook salmon upstream of Lower Granite Dam. The 437,633 yearlings released from the Fall Chinook Acclimation Project facilities were short of the 450,000 fish quota. We use Passive Integrated Transponder (PIT) tag technology to monitor the primary performance measures of survival to mainstem dams and migration timing. We also monitor size, condition and tag/mark retention at release. We released 7,492 PIT tagged yearlings from Pittsburg Landing, 7,494 from Big Canyon and 2,497 from Captain John Rapids. Fish health sampling indicated that, overall, bacterial kidney disease levels at the acclimation facilities could be considered medium with 37-83% of the fish sampled rating medium to very high. Mean fork lengths (95% confidence interval) of the PIT tagged groups ranged from 153.7 mm (153.2-154.2 mm) at Captain John Rapids to 164.2 mm (163.9-164.5 mm) at Pittsburg Landing. Mean condition factors ranged from 1.06 at Lyons Ferry Hatchery to 1.22 at Captain John Rapids. Estimated survival (95% confidence interval) of PIT tagged yearlings from release to Lower Granite Dam ranged from 83.1% (80.7-85.5%) for Big Canyon to 91.7% (87.7-95.7%) for Captain John Rapids. Estimated survival from release to McNary Dam ranged from 59.9% (54.6-65.2%) for Big Canyon to 69.4% (60.5-78.4%) for Captain John Rapids. Median migration rates to Lower Granite Dam, based on all observations of PIT tagged yearlings from the FCAP facilities, ranged from 5.8 river kilometers per day (rkm/d) for Captain

  4. Grande Ronde Basin Spring Chinook Salmon Captive Broodstock Program, 1995-2002 Summary Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hoffnagle, Timothy; Carmichael, Richard; Noll, William

    2003-12-01

    The Grande Ronde Basin once supported large runs of chinook salmon Oncorhynchus tshawytscha and estimated peak escapements in excess of 10,000 occurred as recently as the late 1950's (U.S. Army Corps of Engineers 1975). Natural escapement declines in the Grande Ronde Basin have been severe and parallel those of other Snake River populations. Reduced productivity has primarily been attributed to increased mortality associated with downstream and upstream migration past eight dams and reservoirs in the Snake and Columbia rivers. Reduced spawner numbers, combined with human manipulation of previously important spawning and rearing habitat in the Grande Ronde Basin, have resulted in decreased spawning distribution and population fragmentation of chinook salmon in the Grande Ronde Basin (Figure 1; Table 1). Escapement of spring/summer chinook salmon in the Snake River basin included 1,799 adults in 1995, less than half of the previous record low of 3,913 adults in 1994. Catherine Creek, Grande Ronde River and Lostine River were historically three of the most productive populations in the Grande Ronde Basin (Carmichael and Boyce 1986). However, productivity of these populations has been poor for recent brood years. Escapement (based on total redd counts) in Catherine Creek and Grande Ronde and Lostine rivers dropped to alarmingly low levels in 1994 and 1995. A total of 11, 3 and 16 redds were observed in 1994 in Catherine Creek, upper Grande Ronde River and Lostine River, respectively, and 14, 6 and 11 redds were observed in those same streams in 1995. In contrast, the maximum number of redds observed in the past was 505 in Catherine Creek (1971), 304 in the Grande Ronde River (1968) and 261 in 1956 in the Lostine River (Tranquilli et al 2003). Redd counts for index count areas (a standardized portion of the total stream) have also decreased dramatically for most Grande Ronde Basin streams from 1964-2002, dropping to as low as 37 redds in the 119.5 km in the index

  5. Fall Chinook Acclimation Project; Pittsburg Landing, Captain John Rapids, and Big Canyon, Annual Report 2002.

    Energy Technology Data Exchange (ETDEWEB)

    McLeod, Bruce

    2003-01-01

    Fisheries co-managers of U.S. v Oregon supported and directed the construction and operation of acclimation and release facilities for Snake River fall Chinook from Lyons Ferry Hatchery at three sites above Lower Granite Dam. In 1996, Congress instructed the U.S. Army Corps of Engineers (USCOE) to construct, under the Lower Snake River Compensation Plan (LSRCP), final rearing and acclimation facilities for fall Chinook in the Snake River basin to complement their activities and efforts in compensating for fish lost due to construction of the lower Snake River dams. The Nez Perce Tribe (NPT) played a key role in securing funding and selecting acclimation sites, then assumed responsibility for operation and maintenance of the facilities. In 1997, Bonneville Power Administrative (BPA) was directed to fund operations and maintenance (O&M) for the facilities. Two acclimation facilities, Captain John Rapids and Pittsburg Landing, are located on the Snake River between Asotin, WA and Hells Canyon Dam and one facility, Big Canyon, is located on the Clearwater River at Peck. The Capt. John Rapids facility is a single pond while the Pittsburg Landing and Big Canyon sites consist of portable fish rearing tanks assembled and disassembled each year. Acclimation of 450,000 yearling smolts (150,000 each facility) begins in March and ends 6 weeks later. When available, an additional 2,400,000 fall Chinook sub-yearlings may be acclimated for 6 weeks, following the smolt release. The project goal is to increase the naturally spawning population of Snake River fall Chinook salmon upstream of Lower Granite Dam. This is a supplementation project; in that hatchery produced fish are acclimated and released into the natural spawning habitat for the purpose of returning a greater number of spawners to increase natural production. Only Snake River stock is used and production of juveniles occurs at Lyons Ferry Hatchery. This is a long-term project, targeted to work towards achieving

  6. Scalable nanohelices for predictive studies and enhanced 3D visualization.

    Science.gov (United States)

    Meagher, Kwyn A; Doblack, Benjamin N; Ramirez, Mercedes; Davila, Lilian P

    2014-11-12

    Spring-like materials are ubiquitous in nature and of interest in nanotechnology for energy harvesting, hydrogen storage, and biological sensing applications. For predictive simulations, it has become increasingly important to be able to model the structure of nanohelices accurately. To study the effect of local structure on the properties of these complex geometries one must develop realistic models. To date, software packages are rather limited in creating atomistic helical models. This work focuses on producing atomistic models of silica glass (SiO₂) nanoribbons and nanosprings for molecular dynamics (MD) simulations. Using an MD model of "bulk" silica glass, two computational procedures to precisely create the shape of nanoribbons and nanosprings are presented. The first method employs the AWK programming language and open-source software to effectively carve various shapes of silica nanoribbons from the initial bulk model, using desired dimensions and parametric equations to define a helix. With this method, accurate atomistic silica nanoribbons can be generated for a range of pitch values and dimensions. The second method involves a more robust code which allows flexibility in modeling nanohelical structures. This approach utilizes a C++ code particularly written to implement pre-screening methods as well as the mathematical equations for a helix, resulting in greater precision and efficiency when creating nanospring models. Using these codes, well-defined and scalable nanoribbons and nanosprings suited for atomistic simulations can be effectively created. An added value in both open-source codes is that they can be adapted to reproduce different helical structures, independent of material. In addition, a MATLAB graphical user interface (GUI) is used to enhance learning through visualization and interaction for a general user with the atomistic helical structures. One application of these methods is the recent study of nanohelices via MD simulations for

  7. Toxicity of agricultural subsurface drainwater from the San Joaquin Valley, California to juvenile chinook salmon and striped bass

    Science.gov (United States)

    Saiki, Michael K.; Jennings, Mark R.; Wiedmeyer, Raymond H.

    1992-01-01

    Juvenile chinook salmon Oncorhynchus tshawytscha (40-50 mm total length, TL) and striped bass Morone saxatilis (30-40 mm TL) were exposed to serial dilutions (100, 50, 25, and 12.5%) of agricultural subsurface drainwater (WWD), reconstituted drainwater (RWWD), and reconstituted seawater (IO). Agricultural subsurface drainwater contained naturally elevated concentrations of major ions (such as sodium and sulfate) and trace elements (especially boron and selenium), RWWD contained concentrations of major ions that mimicked those in WWD but trace elements were not elevated, and IO contained concentrations of total dissolved salt that were similar to those in WWD and RWWD but chloride replaced sulfate as the dominant anion. After 28 d of static exposure, over 75% of the chinook salmon in 100% WWD had died, whereas none had died in other dilutions and water types. Growth of chinook salmon in WWD and RWWD, but not in IO, exhibited dilution responses. All striped bass died in 100% WWD within 23 d, whereas 19 of 20 striped bass had died in 100% RWWD after 28 d. In contrast, none died in 100% IO. Growth of striped bass was impaired only in WWD. Fish in WWD accumulated as much as 200 μg/g (dry-weight basis) of boron, whereas fish in control water accumulated less than 3.1 μg/g. Although potentially toxic concentrations of selenium occurred in WWD (geometric means, 158-218 μg/L), chinook salmon and striped bass exposed to this water type accumulated 5.7 μg Se/g or less. These findings indicate that WWD was toxic to chinook salmon and striped bass. Judging from available data, the toxicity of WWD was due primarily to high concentrations of major ions present in atypical ratios, to high concentrations of sulfate, or to both. High concentrations of boron and selenium also may have contributed to the toxicity of WWD, but their effects were not clearly delineated.

  8. Grande Ronde Endemic Spring Chinook Salmon Supplementation Project; Lostine River Operations and Maintenance 2007 Smolt Acclimation and Adult Return Report.

    Energy Technology Data Exchange (ETDEWEB)

    Zollman, Richard L.; Eschler, Russell; Sealey, Shawn [Nez Perce Tribe

    2009-03-31

    The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the eleventh season (1997-2007) of adult Chinook salmon broodstock collection in the Lostine River and the ninth season (1999-2007) of acclimation of resulting Lostine River progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progeny for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies In 2007

  9. Grande Ronde Endemic Spring Chinook Salmon Supplementation Project; Lostine River Operations and Maintenance 2006 Smolt Acclimation and Adult Return Report.

    Energy Technology Data Exchange (ETDEWEB)

    Zollman, Richard L.; Eschler, Russell; Sealey, Shawn [Nez Perce Tribe

    2009-03-31

    The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the tenth season (1997-2006) of adult Chinook salmon broodstock collection in the Lostine River and the eighth season (1999-2006) of acclimation of resulting Lostine River progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progeny for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies In 2006

  10. Grande Ronde Endemic Spring Chinook Salmon Supplementation Project; Lostine River Operations and Maintenance 2004 Smolt Acclimation and Adult Return Report.

    Energy Technology Data Exchange (ETDEWEB)

    Zollman, Richard L.; Eschler, Russell; Sealey, Shawn [Nez Perce Tribe

    2009-03-31

    The Nez Perce Tribe (NPT), through funding provided by the Bonneville Power Administration (BPA), has implemented a Chinook salmon supplementation program (250,000 smolts) on the Lostine River, a tributary to the Grande Ronde River of Oregon. The Grande Ronde Endemic Spring Chinook Salmon Supplementation project, which involves supplementation of the Upper Grande Ronde River and Catherine Creek in addition to the Lostine River, was established to prevent extirpation and increase the number of threatened Snake River spring/summer Chinook salmon (Oncorhynchus tshawytscha) returning to the Grande Ronde River. This report covers the eighth season (1997-2004) of adult Chinook salmon broodstock collection in the Lostine River and the sixth season (1999-2004) of acclimation of resulting Lostine River progeny. Production of Lostine River spring Chinook salmon smolts currently occurs at Lookingglass Fish Hatchery (LGH). The Lostine River supplementation program utilizes two strategies to obtain egg source for production of smolts for supplementation: captive broodstock and conventional broodstock. The captive broodstock strategy involves (1) capture of natural juvenile spring Chinook salmon smolts from the Lostine River, (2) rearing those to adult and spawning them, and (3) rearing the resultant progeny for eventual acclimation and release back into the Lostine River. The conventional broodstock strategy involves (1) capture of natural and hatchery origin adults returning to the Lostine River, (2) holding those adults and spawning them, and (3) rearing the resultant progency for acclimation and release back into the Lostine River. This report focuses on (1) the trapping and collection of adult spring Chinook salmon that return to the Lostine River, which provides the broodstock source for the conventional strategy and (2) the acclimation and release of juvenile spring Chinook salmon produced from the captive broodstock and conventional broodstock strategies. In 2004

  11. Captive Rearing Program for Salmon River Chinook Salmon, 2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Venditti, David; Willard, Catherine; James, Chris

    2003-11-01

    During 2002, the Idaho Department of Fish and Game continued to develop techniques to rear Chinook salmon Oncorhynchus tshawytscha to sexual maturity in captivity and to monitor their reproductive performance under natural conditions. Eyed-eggs were hydraulically collected from redds in the East Fork Salmon River (EFSR; N = 328) and the West Fork Yankee Fork Salmon River (WFYF; N = 308) to establish brood year 2002 culture cohorts. The eyed-eggs were incubated and reared at the Eagle Fish Hatchery, Eagle, Idaho (Eagle). Juveniles collected in 2000 were PIT and elastomer tagged and vaccinated against vibrio Vibrio spp. and bacterial kidney disease prior to being transferred to the NOAA Fisheries, Manchester Marine Experimental Station, Manchester, Washington (Manchester) for saltwater rearing through maturity. Smolt transfers included 203 individuals from the WFYF and 379 from the EFSR. Maturing fish transfers from Manchester to Eagle included 107 individuals from the LEM, 167 from the WFYF, and 82 from the EFSR. This was the second year maturing adults were held on chilled water at Eagle to test if water temperature manipulations could advance spawn timing. Adults from the LEM and WFYF were divided into chilled ({approx} 9 C) and ambient ({approx} 13.5 C) temperature groups while at Eagle. Forty-seven mature females from the LEM (19 chilled, 16 ambient, and 12 ambient not included in the temperature study) were spawned at Eagle with 42 males in 2002. Water temperature group was not shown to affect the spawn timing of these females, but males did mature earlier. Egg survival to the eyed stage averaged 66.5% and did not differ significantly between the temperature groups. Personnel from the Shoshone-Bannock Tribe placed a total of 47,977 eyed-eggs from these crosses in in-stream incubators. Mature adults (N = 215 including 56 precocial males) were released into the WFYF to evaluate their reproductive performance. After release, fish distributed themselves throughout

  12. Evaluation of two release operations at Bonneville Dam on the smolt-to-adult survival of Spring Creek National Fish Hatchery fall Chinook salmon

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — In March 2004, two groups of coded wire tagged subyearling fall Chinook were released from Spring Creek National Fish Hatchery to directly evaluate the effects of...

  13. Distribution and survival of adult hatchery spring Chinook Salmon radio-tagged and released upstream of Warm Springs National Fish Hatchery in 2008: Progress report

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Warm Springs River supports the largest population of wild spring Chinook salmon (Oncorhynchus tshawytscha) in the Deschutes River Basin. Located on the Warm...

  14. Assessment of the Flow-Survival Relationship Obtained by Sims and Ossiander (1981) for Snake River Spring/Summer Chinook Salmon Smolts, Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Steward, C.R. (Cleveland R.)

    1994-04-01

    There has been much debate recently among fisheries professionals over the data and functional relationships used by Sims and Ossiander to describe the effects of flow in the Snake River on the survival and travel time of chinook salmon and steelhead smolts. The relationships were based on mark and recovery experiments conducted at various Snake and Columbia River sites between 1964 and 1979 to evaluate the effects of dams and flow regulation on the migratory characteristic`s chinook sa mon and steelhead trout smolts. The reliability of this information is crucial because it forms the logical basis for many of the flow management options being considered today to protect,upriver populations of chinook salmon and steelhead trout. In this paper I evaluate the primary data, assumptions, and calculations that underlie the flow-survival relationship derived by Sims and Ossiander (1981) for chinook salmon smolts.

  15. Relationships Between Landscape Habitat Characteristics and Relative Density Categories of Steelhead Trout and Chinook Salmon Parr in Idaho, 1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Thompson, William L.; Lee, Danny C.

    1999-09-01

    This paper is an investigation into possible relationships between landscape habitat characteristics and density categories of steelhead and spring/summer chinook parr within index streams in the Snake River drainage in Idaho.

  16. STUDIES ON ENHANCED CONDUCTIVITY OF STRETCHED CONDUCTING POLYMERS

    Institute of Scientific and Technical Information of China (English)

    WAN Meixiang

    1995-01-01

    A physical model of series of the conductivity on chain and the interchain conductivity between chains is proposed to explain enhanced conductivity of stretched conducting polymers.This model suggests that the enhanced conductivity for stretched conducting polymers might be due to increasing of the interchain conductivity between chains along the elongation direction after drawing processes if the conductivity on chain is assumed much larger than that of the interchain conductivity between chains. According to this model, it is expected that the temperature dependence of conductivity measured by four-probe method for stretched conducting polymers is controlled by a variation of the interchain conductivity between chains with temperature, which can be used to explain that a metallic temperature dependence of conductivity for stretched conducting polymers is not observed although the conductivity along the elongation direction is enhanced by two or three orders of magnitude.

  17. Unusual aerobic performance at high temperatures in juvenile Chinook salmon, Oncorhynchus tshawytscha

    Science.gov (United States)

    Poletto, Jamilynn B.; Cocherell, Dennis E.; Baird, Sarah E.; Nguyen, Trinh X.; Cabrera-Stagno, Valentina; Farrell, Anthony P.; Fangue, Nann A.

    2017-01-01

    Understanding how the current warming trends affect fish populations is crucial for effective conservation and management. To help define suitable thermal habitat for juvenile Chinook salmon, the thermal performance of juvenile Chinook salmon acclimated to either 15 or 19°C was tested across a range of environmentally relevant acute temperature changes (from 12 to 26°C). Swim tunnel respirometers were used to measure routine oxygen uptake as a measure of routine metabolic rate (RMR) and oxygen uptake when swimming maximally as a measure of maximal metabolic rate (MMR) at each test temperature. We estimated absolute aerobic scope (AAS = MMR − RMR), the capacity to supply oxygen beyond routine needs, as well as factorial aerobic scope (FAS = MMR/RMR). All fish swam at a test temperature of 23°C regardless of acclimation temperature, but some mortality occurred at 25°C during MMR measurements. Overall, RMR and MMR increased with acute warming, but aerobic capacity was unaffected by test temperatures up to 23°C in both acclimation groups. The mean AAS for fish acclimated and tested at 15°C (7.06 ± 1.76 mg O2 kg−1 h−1) was similar to that measured for fish acclimated and tested at 19°C (8.80 ± 1.42 mg O2 kg−1 h−1). Over the entire acute test temperature range, while MMR and AAS were similar for the two acclimation groups, RMR was significantly lower and FAS consequently higher at the lower test temperatures for the fish acclimated at 19°C. Thus, this stock of juvenile Chinook salmon shows an impressive aerobic capacity when acutely warmed to temperatures close to their upper thermal tolerance limit, regardless of the acclimation temperature. These results are compared with those for other salmonids, and the implications of our findings for informing management actions are discussed. PMID:28078086

  18. Captive Rearing Initiative for Salmon River Chinook Salmon, 1998-1999 Progress Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hassemer, Peter F.

    2001-04-01

    During 1999, the Idaho Department of Fish and Game (IDFG) continued developing techniques for the captive rearing of chinook salmon Oncorhynchus tshawytscha. Techniques under development included protocols for rearing juveniles in freshwater and saltwater hatchery environments, and fieldwork to collect brood year 1998 and 1999 juveniles and eggs and to investigate the ability of these fish to spawn naturally. Fish collected as juveniles were held for a short time at the Sawtooth Fish Hatchery and later transferred to the Eagle Fish Hatchery for rearing. Eyed-eggs were transferred immediately to the Eagle Fish Hatchery where they were disinfected and reared by family groups. When fish from either collection method reached approximately 60 mm, they were PIT tagged and reared separately by brood year and source stream. Sixteen different groups were in culture at IDFG facilities in 1999. Hatchery spawning activities of captive-reared chinook salmon produced eyed-eggs for outplanting in streamside incubation chambers in the West Fork Yankee Fork Salmon River (N=2,297) and the East Fork Salmon River (N=1,038). Additionally, a number of these eggs were maintained at the Eagle Fish Hatchery to ensure adequate brood year 1999 representation from these systems, and produced 279 and 87 juveniles from the West Fork Yankee Fork and East Fork Salmon River, respectively. Eyed-eggs were not collected from the West Fork Yankee Fork due to low adult escapement. Brood year 1998 juveniles were collected from the Lemhi River (N=191), West Fork Yankee Fork Salmon River (N=229), and East Fork Salmon River (N=185). Additionally, brood year 1999 eyed-eggs were collected from the Lemhi River (N=264) and East Fork Salmon River (N=143). Sixty-two and seven maturing adults were released into Bear Valley Creek (Lemhi River system) and the East Fork Salmon River, respectively, for spawning evaluation in 1999. Nine female carcasses from Bear Valley Creek were examined for egg retention, and of

  19. Population Structure of Columbia River Basin Chinook Salmon and Steelhead Trout, Technical Report 2001.

    Energy Technology Data Exchange (ETDEWEB)

    Brannon, E.L.; National Science Foundation (U.S.)

    2002-08-01

    The population structure of chinook salmon and steelhead trout is presented as an assimilation of the life history forms that have evolved in synchrony with diverse and complex environments over their Pacific range. As poikilotherms, temperature is described as the overwhelming environmental influence that determines what life history options occur and where they are distributed. The different populations represent ecological types referred to as spring-, summer-, fall, and winter-run segments, as well as stream- and ocean-type, or stream- and ocean-maturing life history forms. However, they are more correctly described as a continuum of forms that fall along a temporal cline related to incubation and rearing temperatures that determine spawn timing and juvenile residence patterns. Once new habitats are colonized, members of the founding populations spread through adaptive evolution to assume complementary life history strategies. The related population units are collectively referred to as a metapopulation, and members most closely associated within common temporal and geographic boundaries are designated as first-order metapopulations. Population structure of chinook salmon and steelhead in the Columbia Basin, therefore, is the reflection of the genetic composition of the founding source or sources within the respective region, shaped by the environment, principally temperature, that defines life history evolutionary strategy to maximize fitness under the conditions delineated. The complexity of structure rests with the diversity of opportunities over the elevations that exist within the Basin. Consistent with natural selection, rather than simply attempting to preserve populations, the challenge is to provide opportunities to expand their range to new or restored habitat that can accommodate genetic adaptation as directional environmental changes are elaborated. Artificial propagation can have a critical role in this process, and the emphasis must be placed on

  20. Captive Rearing Initiative for Salmon River Chinook Salmon, 1999 Progress Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hassemer, Peter F.

    2001-04-01

    During 1999, the Idaho Department of Fish and Game (IDFG) continued developing techniques for the captive rearing of chinook salmon Oncorhynchus tshawytscha. Techniques under development included protocols for rearing juveniles in freshwater and saltwater hatchery environments, and fieldwork to collect brood year 1998 and 1999 juveniles and eggs and to investigate the ability of these fish to spawn naturally. Fish collected as juveniles were held for a short time at the Sawtooth Fish Hatchery and later transferred to the Eagle Fish Hatchery for rearing. Eyed-eggs were transferred immediately to the Eagle Fish Hatchery where they were disinfected and reared by family groups. When fish from either collection method reached approximately 60 mm, they were PIT tagged and reared separately by brood year and source stream. Sixteen different groups were in culture at IDFG facilities in 1999. Hatchery spawning activities of captive-reared chinook salmon produced eyed-eggs for outplanting in streamside incubation chambers in the West Fork Yankee Fork Salmon River (N=2,297) and the East Fork Salmon River (N=1,038). Additionally, a number of these eggs were maintained at the Eagle Fish Hatchery to ensure adequate brood year 1999 representation from these systems, and produced 279 and 87 juveniles from the West Fork Yankee Fork and East Fork Salmon River, respectively. Eyed-eggs were not collected from the West Fork Yankee Fork due to low adult escapement. Brood year 1998 juveniles were collected from the Lemhi River (N=191), West Fork Yankee Fork Salmon River (N=229), and East Fork Salmon River (N=185). Additionally, brood year 1999 eyed-eggs were collected from the Lemhi River (N=264) and East Fork Salmon River (N=143). Sixty-two and seven maturing adults were released into Bear Valley Creek (Lemhi River system) and the East Fork Salmon River, respectively, for spawning evaluation in 1999. Nine female carcasses from Bear Valley Creek were examined for egg retention, and of

  1. Post-mortem sporulation of Ceratomyxa shasta (Myxozoa) after death in adult Chinook salmon

    Science.gov (United States)

    Kent, Michael L.; Soderlund, K.; Thomann, E.; Schreck, Carl B.; Sharpton, T.J.

    2014-01-01

    Ceratomyxa shasta (Myxozoa) is a common gastrointestinal pathogen of salmonid fishes in the Pacific Northwest of the United States. We have been investigating this parasite in adult Chinook salmon (Oncorhynchus tshawytscha) in the Willamette River, Oregon. In prior work, we observed differences in the pattern of development of C. shasta in adult salmon compared to juvenile salmon. Adult salmon consistently had large numbers of prespore stages in many of the fish that survived to spawn in the fall. However, myxospores were rarely observed, even though they were exposed and presumably infected for months before spawning. We evaluated the ability of C. shasta to sporulate following fish death because it is reported that myxosores are common in carcasses of Chinook salmon. We collected the intestine from 30 adult salmon immediately after artificial spawning and death (T0). A total of 23 fish were infected with C. shasta based on histology, but only a few myxospores were observed in 1 fish by histology. Intestines of these fish were examined at T0 and T7 (latter held at 17 C for 7 days) using quantified wet mount preparations. An increase in myxospore concentrations was seen in 39% of these fish, ranging between a 1.5- to a 14.5-fold increase. The most heavily infected fish exhibited a 4.6-fold increase from 27,841 to 129,352 myxospores/cm. This indicates, supported by various statistical analyses, that under certain conditions presporogonic forms are viable and continue to sporulate after death in adult salmon. Considering the life cycle of C. shasta and anadromous salmon, the parasite may have evolved 2, non-mutually exclusive developmental strategies. In young fish (parr and smolts), the parasite sporulates shortly after infection and is released into freshwater from either live or dead fish before their migration to seawater, where the alternate host is absent. The second strategy occurs in adult salmon, particularly spring Chinook salmon, which become infected upon

  2. Escapement and Productivity of Spring Chinook and Summer Steelhead in the John Day River Basin, Technical Report 2004-2005.

    Energy Technology Data Exchange (ETDEWEB)

    Wilson, Wayne

    2007-04-01

    The objectives are: (1) Estimate number and distribution of spring Chinook salmon Oncorhynchus tshawytscha redds and spawners in the John Day River subbasin; and (2) Estimate smolt-to-adult survival rates (SAR) and out-migrant abundance for spring Chinook and summer steelhead O. mykiss and life history characteristics of summer steelhead. Spawning ground surveys for spring (stream-type) Chinook salmon were conducted in four main spawning areas (Mainstem, Middle Fork, North Fork, and Granite Creek System) and seven minor spawning areas (South Fork, Camas Creek, Desolation Creek, Trail Creek, Deardorff Creek, Clear Creek, and Big Creek) in the John Day River basin during August and September of 2005. Census surveys included 298.2 river kilometers (88.2 rkm within index, 192.4 rkm additional within census, and 17.6 rkm within random survey areas) of spawning habitat. We observed 902 redds and 701 carcasses including 227 redds in the Mainstem, 178 redds in the Middle Fork, 420 redds in the North Fork, 62 redds in the Granite Creek System, and 15 redds in Desolation Creek. Age composition of carcasses sampled for the entire basin was 1.6% age 3, 91.2% age 4, and 7.1% age 5. The sex ratio was 57.4% female and 42.6% male. Significantly more females than males were observed in the Granite Creek System. During 2005, 82.3% of female carcasses sampled had released all of their eggs. Significantly more pre-spawn mortalities were observed in Granite Creek. Nine (1.3%) of 701 carcasses were of hatchery origin. Of 298 carcasses examined, 4.0% were positive for the presence of lesions. A significantly higher incidence of gill lesions was found in the Granite Creek System when compared to the rest of the basin. Of 114 kidney samples tested, two (1.8%) had clinical BKD levels. Both infected fish were age-4 females in the Middle Fork. All samples tested for IHNV were negative. To estimate spring Chinook and summer steelhead smolt-to-adult survival (SAR) we PIT tagged 5,138 juvenile

  3. Physicochemical characterization and solubility enhancement studies of allopurinol solid dispersions

    Directory of Open Access Journals (Sweden)

    Jagdale Swati Changdeo

    2011-09-01

    Full Text Available Allopurinol is a commonly used drug in the treatment of chronic gout or hyperuricaemia associated with treatment of diuretic conditions. One of the major problems with the drug is that it is practically insoluble in water, which results in poor bioavailability after oral administration. In the present study, solid dispersions of allopurinol were prepared by solvent evaporation, kneading method, co-precipitation method, co-grinding method and closed melting methods to increase its water solubility. Hydrophilic carriers such as polyvinylpyrrolidone, polyethylene glycol 6000 were used in the ratio of 1:1, 1:2 and 1:4 (drug to carrier ratio. The aqueous solubility of allopurinol was favored by the presence of both polymers. These new formulations were characterized in the liquid state by phase solubility studies and in the solid state by differential scanning calorimetry, powder X-ray diffraction, UV and Fourier Transform Infrared spectroscopy. Solid state characterizations indicated that allopurinol was present as an amorphous material and entrapped in polymer matrix. In contrast to the very slow dissolution rate of pure allopurinol, the dispersion of the drug in the polymers considerably enhanced the dissolution rate. Solid dispersion prepared with polyvinylpyrrolidone showed highest improvement in wettability and dissolution rate of allopurinol. Mathematical modeling of in vitro dissolution data indicated the best fitting with Korsemeyer-Peppas model and the drug release kinetics primarily as Non-Fickian diffusion. Therefore, the present study showed that polyvinylpyrrolidone and polyethylene glycol 6000 have a significant solubilizing effect on allopurinol.Alopurinol é fármaco comumente utilizado no tratamento de gota crônica ou hiperuricemia associada com o tratamento em condições diuréticas. Um dos maiores problemas com o fármaco é que este é praticamente insolúvel em água, o que resulta em baixa biodisponibilidade na administra

  4. A comparison of implantation methods for large PIT tags or injectable acoustic transmitters in juvenile Chinook salmon

    Energy Technology Data Exchange (ETDEWEB)

    Cook, Katrina V.; Brown, Richard S.; Deng, Zhiqun; Klett, Ryan S.; Li, Huidong; Seaburg, Adam; Eppard, M. B.

    2014-04-15

    The miniaturization of acoustic transmitters may allow greater flexibility in terms of the size and species of fish available to tag. New downsized injectable acoustic tags similar in shape to passive integrated transponder tags can be rapidly injected rather than surgically implanted through a sutured incision, as is current practice. Before wide-scale field use of these injectable transmitters, standard protocols to ensure the most effective and least damaging methods of implantation must be developed. Three implantation methods were tested in various sizes of juvenile Chinook salmon Oncorhynchus tschawytscha. Methods included a needle bevel-down injection, a needle bevel-up injection with a 90-degree rotation, and tag implantation through an unsutured incision. Tagged fish were compared to untagged control groups. Weight and wound area were measured at tagging and every week for 3 weeks; holding tanks were checked daily for mortalities and tag losses. No differences among treatments were found in growth, tag loss, or survival, but wound area was significantly reduced among incision-treated fish. The bevel-up injection had the worst results in terms of tag loss and wound area and also had high mortality. Implantation through an incision resulted in the lowest tag loss but the highest mortality. Fish from the bevel-down treatment group had the least mortality; wound areas also were smaller than the bevel-up treatment group. Cumulatively, the data suggest that the unsutured incision and bevel-down injection methods were the most effective; the drawbacks of both methods are described in detail. However, we further recommend larger and longer studies to find more robust thresholds for tagging size that include more sensitive measures.

  5. Escapement Monitoring of Adult Chinook Salmon in the Secesh River and Lake Creek, Idaho, 1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Faurot, Dave; Kucera, Paul A. (Nez Perce Tribe, Lapwai, ID)

    2001-04-01

    Underwater time-lapse video technology was used to monitor adult spring and summer chinook salmon abundance in spawning areas in Lake Creek and the Secesh River, Idaho, in 1999. This technique is a passive methodology that does not trap or handle this Endangered Species Act listed species. This was the third year of testing the remote application of this methodology in the Secesh River drainage. Secesh River chinook salmon represent a wild salmon spawning aggregate that has not been directly supplemented with hatchery fish. Adult chinook salmon spawner abundance was estimated in Lake Creek with the remote time-lapse video application. Adult spawner escapement into Lake Creek in 1999 was 67 salmon. Significant upstream and downstream spawner movement affected the ability to determine the number of fish that contributed to the spawning population. The first passage on Lake Creek was recorded on July 11, two days after installation of the fish counting station. Peak net upstream adult movement occurred at the Lake Creek site on July 20, peak of total movement activity was August 19 with the last fish observed on August 26. A minimum of 133 adult chinook salmon migrated upstream past the Secesh River fish counting station to spawning areas in the Secesh River drainage. The first upstream migrating adult chinook salmon passed the Secesh River site prior to the July 15 installation of the fish counting station. Peak net upstream adult movement at the Secesh River site occurred July 19, peak of total movement was August 15, 17 and 18 and the last fish passed on September 10. Migrating salmon in the Secesh River and Lake Creek exhibited two behaviorally distinct segments of fish movement. Mainly upstream only, movement characterized the first segment. The second segment consisted of upstream and downstream movement with very little net upstream movement. Estimated abundance was compared to single and multiple-pass redd count surveys within the drainage. There were

  6. MAMSYADI KWATHA AS LEARNING ENHANCER: AN EXPERIMENTAL STUDY

    Directory of Open Access Journals (Sweden)

    Shreevathsa

    2011-05-01

    Full Text Available Mamsyadi kwatha, an Ayurvedic formulation mentioned in siddha yoga sangraha is highly effective in minor mental disorders. The ingredients are Jatamamsi (Nordostachys jatamamsi DC, Ashwagandha (Withania somnifera Linn. and Parasika yavani (Hyoscymus niger Linn. in 8:4:1 ratio respectively.The test formulation was subjected to assess its effect on learning phenomenon. The model selected for the evaluation was Rotarod performance. The test formulation enhanced learning ability in Mice.

  7. Competing conservation objectives for predators and prey: estimating killer whale prey requirements for Chinook salmon.

    Directory of Open Access Journals (Sweden)

    Rob Williams

    Full Text Available Ecosystem-based management (EBM of marine resources attempts to conserve interacting species. In contrast to single-species fisheries management, EBM aims to identify and resolve conflicting objectives for different species. Such a conflict may be emerging in the northeastern Pacific for southern resident killer whales (Orcinus orca and their primary prey, Chinook salmon (Oncorhynchus tshawytscha. Both species have at-risk conservation status and transboundary (Canada-US ranges. We modeled individual killer whale prey requirements from feeding and growth records of captive killer whales and morphometric data from historic live-capture fishery and whaling records worldwide. The models, combined with caloric value of salmon, and demographic and diet data for wild killer whales, allow us to predict salmon quantities needed to maintain and recover this killer whale population, which numbered 87 individuals in 2009. Our analyses provide new information on cost of lactation and new parameter estimates for other killer whale populations globally. Prey requirements of southern resident killer whales are difficult to reconcile with fisheries and conservation objectives for Chinook salmon, because the number of fish required is large relative to annual returns and fishery catches. For instance, a U.S. recovery goal (2.3% annual population growth of killer whales over 28 years implies a 75% increase in energetic requirements. Reducing salmon fisheries may serve as a temporary mitigation measure to allow time for management actions to improve salmon productivity to take effect. As ecosystem-based fishery management becomes more prevalent, trade-offs between conservation objectives for predators and prey will become increasingly necessary. Our approach offers scenarios to compare relative influence of various sources of uncertainty on the resulting consumption estimates to prioritise future research efforts, and a general approach for assessing the extent of

  8. Snake River Spring/Summer Chinook Captive Broodstock Rearing and Research, 2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Maynard, Desmond J.; McAuley, W. Carlin (National Marine Fisheries Service, Northwest Fisheries Science Center, Resource Enhancement and Utilization, Seattle, WA)

    2004-08-01

    In 1995, the National Marine Fisheries Service (NMFS), in cooperation with the Idaho Department of Fish and Game (IDFG), the Oregon Department of Fish and Wildlife (ODFW), and the Bonneville Power Administration (BPA) established captive broodstock programs to aid in the recovery of Snake River spring/summer chinook salmon (Oncorhynchus tshawytscha) listed as endangered under the U.S. Endangered Species Act (ESA). These programs are intended to provide safety nets for Salmon and Grande Ronde River Basins spring/summer chinook salmon stocks. They also provide a basis of examining the efficacy of captive rearing and captive breeding programs as tools for recovering listed salmonid populations. In years when no or few naturally produced fish return from the sea, captive fish and their progeny can be used to maintain populations in these two Snake River Basin tributaries. The NMFS facility at Manchester, WA provides the crucial seawater environment needed to culture anadromous salmonids during the marine phase of their life cycle. At the Manchester Research Station, the fish are cultured in 6.1m diameter circular tanks housed in a fully enclosed and secure building. The tanks are supplied with seawater that has been processed to eliminate most marine pathogens. The fish are fed a commercially prepared diet and held at densities and loading rates intended to maximize fish quality. When fish begin to mature, they are transferred to ODFW or IDFG freshwater facilities in Oregon and Idaho for final maturation. The states then release the mature fish (Idaho) or their progeny (Oregon) back into their native Snake River tributary waters in restoration efforts. In FY 2003, NMFS cultured 1998, 1999, 2000, and 2001 broodyear fish at its Manchester Facility. This report addresses program activities from September 1, 2002 to August 31, 2003.

  9. Effects of a Novel Fish Transport System on the Health of Adult Fall Chinook Salmon

    Energy Technology Data Exchange (ETDEWEB)

    Geist, David R.; Colotelo, Alison H.; Linley, Timothy J.; Wagner, Katie A.; Miracle, Ann L.

    2016-12-01

    Movement past hydroelectric dams and related in-river structures has important implications for habitat connectivity and population persistence in migratory fish. A major problem is that many of these structures lack effective fish passage facilities, which can fragment spawning and rearing areas and negatively impact recruitment. While traditional fish passage facilities (e.g., ladders, trap and haul) can effectively enable fish to pass over barriers, their capital or operational costs can be significant. We evaluated the utility of a novel transport device that utilizes a flexible tube with differential internal air pressure to pass fish around in-river barriers. Three treatments and a control group were tested. In two of the treatments, adult fall Chinook Salmon nearing maturation were transported through the device via two lengths of tube (12 or 77 m) and their injury, stress, and immune system responses and reproductive function were compared to a third treatment where fish were moved by a standard trap and haul method and also to a control group. We observed no significant differences among the treatment or control groups in post-treatment adult survival, injury or stress. Indicators of immune system response and reproductive readiness were also not significantly different among the four groups. Egg survival was significantly different among the groups, but the differences were highly variable within groups and not consistent with the duration of treatment or degree of handling. Taken together, the results suggest the device did not injure or alter normal physiological functioning of adult fall Chinook Salmon nearing maturation and may provide an effective method for transporting such fish around in-river barriers during their spawning migration. Keywords: Whooshh, transport, in-stream barriers, hydropower

  10. Relationships between metabolic rate, muscle electromyograms and swim performance of adult chinook salmon

    Science.gov (United States)

    Geist, D.R.; Brown, R.S.; Cullinan, V.I.; Mesa, M.G.; VanderKooi, S.P.; McKinstry, C.A.

    2003-01-01

    Oxygen consumption rates of adult spring chinook salmon Oncorhynchus tshawytscha increased with swim speed and, depending on temperature and fish mass, ranged from 609 mg O2 h-1 at 30 cm s-1 (c. 0.5 BLs-1) to 3347 mg O2 h-1 at 170 cm s -1 (c. 2.3 BLs-1). Corrected for fish mass, these values ranged from 122 to 670 mg O2 kg-1 h-1, and were similar to other Oncorhynchus species. At all temperatures (8, 12.5 and 17??C), maximum oxygen consumption values levelled off and slightly declined with increasing swim speed >170 cm s-1, and a third-order polynomial regression model fitted the data best. The upper critical swim speed (Ucrit) of fish tested at two laboratories averaged 155 cm s -1 (2.1 BLs-1), but Ucrit of fish tested at the Pacific Northwest National Laboratory were significantly higher (mean 165 cm s-1) than those from fish tested at the Columbia River Research Laboratory (mean 140 cm s-1). Swim trials using fish that had electromyogram (EMG) transmitters implanted in them suggested that at a swim speed of c. 135 cm s-1, red muscle EMG pulse rates slowed and white muscle EMG pulse rates increased. Although there was significant variation between individual fish, this swim speed was c. 80% of the Ucrit for the fish used in the EMG trials (mean Ucrit 168.2 cm s-1). Bioenergetic modelling of the upstream migration of adult chinook salmon should consider incorporating an anaerobic fraction of the energy budget when swim speeds are ???80% of the Ucrit. ?? 2003 The Fisheries Society of the British Isles.

  11. FDA Approved Registration of Erythromycin for Treatment of Bacterial Kidney Disease (BKD) in Juvenile and Adult Chinook Salmon : Annual Report, Reporting Period March 10, 1989 to March 9, 1990.

    Energy Technology Data Exchange (ETDEWEB)

    Moffitt, Christine A.

    1991-04-01

    Erythromycin is a therapeutic substance useful against bacterial kidney disease in salmon. In 1989 we began a multi year project to learn more about erythromycin applied to juvenile and adult salmon, with the goal of achieving registration of erythromycin with the US Food and Drug Administration. To begin the study, we studied the pharmacokinetics of erythromycin administered to both adult and juvenile chinook salmon. We monitored blood plasmas time curves from individual adult fish injected with two forms of injectable erythromycin using one of three routes of administration. In addition, we began experiments to evaluate hatchery applications of erythromycin to individually marked adult salmon, and we recovered blood tissues from these fish at the time of spawning. To determine how to use erythromycin in juvenile salmon, we evaluated the adsorption and elimination of erythromycin applied arterially and orally to individual juvenile fish. In feeding trials we determined the palatability to juvenile chinook salmon of feed made with one of two different carriers for erythromycin thiocyanate. 35 refs., 4 figs. , 3 tabs.

  12. Grande Ronde Endemic Spring Chinook Salmon Supplementation Program; Satellite Facilities Operation and Maintenance, 2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    McLean, Michael L.; Seeger, Ryan; Hewitt, Laurie (Confederated Tribes of the Umatilla Indian Reservation, Department of Natural Resources, Pendleton, OR)

    2006-01-01

    prompting an early release. The total mortality for the acclimation period was 49 (0.05 %). The total number of fish released from the acclimation facility during the late period was 105,369. Maintenance and repair activities were conducted at the acclimation facilities in 2005. Facility maintenance work consisted of snow removal, installation of drainage lines, removal of gravel from intake area, installation of new gate at the CCAF, and complete overhaul of 2 travel trailers. The Catherine Creek Adult Capture Facility (CCACF) was put into operation on 11 February 2005. The first adult summer steelhead was captured on 4 March. A total of 190 adult summer steelhead were trapped and released from 4 March to 16 May 2005. Peak arrival at the trap was the week of 8 April. The first adult spring Chinook salmon was captured at CCACF on 6 May 2005. A total of 226 spring Chinook salmon were trapped from 6 May to 8 July 2005. There were 56 adults and 4 jacks unmarked and 136 adult and 30 jack marked spring Chinook salmon trapped. Peak arrival at the trap was the week of 10 June for the unmarked and marked fish. None of the captive broodstock returns were collected for broodstock. Broodstock was collected systematically over the entire return from 31 May to 6 July 2005. Ten of the 34 broodstock collected and transported from CCACF to LGH were unmarked fish trapped. About 18% of the naturally produced adult males and females trapped were taken to LGH for broodstock. One jack was collected for every 5 adult males that were taken to LGH. A total of 30 age 4 and 5 and 4 age 3 fish were transported to LGH for broodstock. The hatchery component of the broodstock was 66.7%. Five weekly spawning surveys were conducted below the weir on Catherine Creek beginning 30 June 2005. During these surveys no live or dead fish were observed. The trap was removed from Catherine Creek on 3 August 2005. Temperatures at the CCACF ranged from -0.1 C on 14 February to 23.7 C on 21 July. The hourly

  13. ALTERNATIVE AND ENHANCED CHEMICAL CLEANING: CORROSION STUDIES RESULTS: FY2010

    Energy Technology Data Exchange (ETDEWEB)

    Wiersma, B.

    2010-09-29

    Due to the need to close High Level Waste storage tanks, chemical cleaning methods are needed for the removal of sludge heel materials remaining at the completion of mechanical tank cleaning efforts. Oxalic acid is considered the preferred cleaning reagent for heel dissolution of iron-based sludge. However, the large quantity of chemical reagents added to the tank farm from oxalic acid based cleaning has significant downstream impacts. Optimization of the oxalic acid cleaning process can potentially reduce the downstream impacts from chemical cleaning. To optimize oxalic acid usage, a detailed understanding of the chemistry of oxalic acid based sludge dissolution is required. Additionally, other acidic systems may be required for specific waste components that have low solubility in oxalic acid, and as a means to reduce oxalic acid usage in general. Electrochemical corrosion studies were conducted with 1 wt. % oxalic acid at mineral acid concentrations above and below the optimal conditions for this oxalic acid concentration. Testing environments included pure reagents, pure iron and aluminum phases, and sludge simulants. Mineral acid concentrations greater than 0.2 M and temperatures greater than 50 C result in unacceptably high corrosion rates. Results showed that manageable corrosion rates of carbon steel can be achieved at dilute mineral acid concentrations (i.e. less than 0.2 M) and low temperatures based on the contact times involved. Therefore, it is recommended that future dissolution and corrosion testing be performed with a dilute mineral acid and a less concentrated oxalic acid (e.g., 0.5 wt.%) that still promotes optimal dissolution. This recommendation requires the processing of greater water volumes than those for the baseline process during heel dissolution, but allows for minimization of oxalic acid additions. The following conclusions can be drawn from the test results: (1) In both nitric and sulfuric acid based reagents, the low temperature and

  14. Enhanced Landfill Mining case study: Innovative separation techniques

    Science.gov (United States)

    Cuyvers, Lars; Moerenhout, Tim; Helsen, Stefan; Van de Wiele, Katrien; Behets, Tom; Umans, Luk; Wille, Eddy

    2014-05-01

    In 2011, a corporate vision on Enhanced Landfill Mining (ELFM)1 was approved by the OVAM Board of directors, which resulted in an operational programme over the period 2011-2015. OVAM (Public Waste Agency of Flanders) is the competent authority in charge of waste, Sustainable Materials Management (SMM) and contaminated soil management in Flanders. The introduction of the ELFM concept needs to be related with the concept of SMM and the broader shift to a circular economy. Within the concept of ELFM, landfills are no longer considered to be a final and static situation, but a dynamic part of the materials cycle. The main goal of this research programme is to develop a comprehensive policy on resource management to deal with the issue of former landfills. In order to investigate the opportunities of ELFM, the OVAM is applying a three step approach including mapping, surveying and mining of these former landfills. As a result of the mapping part over 2,000 landfill sites, that will need to be dealt with, were revealed. The valorisation potential of ELFM could be assigned to different goals, according to the R³P-concept : Recycling of Materials, Recovery of Energy, Reclamation of Land and Protection of drinking water supply. . On behalf of the OVAM, ECOREM was assigned to follow-up a pilot case executed on a former landfill, located in Zuienkerke, Flanders. Within this case study some technical tests were carried out on the excavated waste material to investigate the possibilities for a waste to resource conversion. The performance of both on site and off site techniques were evaluated. These testings also contribute to the mapping part of OVAM's research programme on ELFM and reveal more information on the composition of former landfills dating from different era's. In order to recover as many materials as possible, five contractors were assigned to perform separation tests on the bulk material from the Zuienkerke landfill. All used techniques were described

  15. ENHANCED RANDOM WALK WITH CHOICE: AN EMPIRICAL STUDY

    Directory of Open Access Journals (Sweden)

    John Alexandris

    2014-03-01

    Full Text Available The Random Walk with d Choice RWC d( is a recently proposed variation of the simple Random Walk that first selects a subset of d neighbor nodes and then decides to move to the node which minimizes the value of a certain parameter; this parameter captures the number of past visits of the walk to that node. In this paper, we propose the Enhanced Random Walk with d Choice algorithm ERWC d h ( , which first selects a subset of d neighbor nodes and then decides to move to the node which minimizes a value H defined at every node; this H value depends on a parameter h and captures information about past visits of the walk to that node and - with a certain weight - to its neighbors. Simulations of the Enhanced Random Walk with d Choice algorithm on various types of graphs indicate beneficial results with respect to Cover Time and Load Balancing. The graph types used are the Random Geometric Graph, Torus, Grid, Hypercube, Lollipop and Bernoulli.

  16. Mitochondrial DNA variation in chinook salmon and chum salmon detected by restriction enzyme analysis of polymerase chain reaction products

    Science.gov (United States)

    Cronin, M.; Spearman, R.; Wilmot, R.; Patton, J.; Bickman, J.

    1993-01-01

    We analyze intraspecific mitochondrial DNA variation in chinook salmon from drainages in the Yukon River, the Kenai River, and Oregon and California rivers; and chum salmon from the Yukon River and vancouver Island, and Washington rivers. For each species, three different portions of the mtDNA molecule were amplified seperately using the polymerase chain reaction and then digested with at least 19 restrictions enzymes. Intraspecific sequence divergences between haplotypes were less than 0.01 base subsitution per nucleotide. Nine chum salmon haplotypes were identified. Yukon River chum salmon stocks displayed more haplotypes (8) occurred in all areas. Seven chinook salmon haplotypes were identified. Four haplotypes occurred in the Yukon and Kenai rviers and four occured in the Oregon/California, with only one haplotype shared between the regions. Sample sizes were too small to quantify the degree of stock seperation among drainages, but the patterns of variation that we observed suggest utility of the technique in genetic stock identification.

  17. Spawning and abundance of fall chinook salmon (Oncorhynchus tshawytscha) in the Hanford Reach of the Columbia River, 1948--1988

    Energy Technology Data Exchange (ETDEWEB)

    Dauble, D.D.; Watson, D.G.

    1990-03-01

    The Hanford Reach of the Columbia River provides the only major spawning habitat for the upriver bright (URB) race of fall chinook salmon in the mainstem Columbia River. Hanford Site biologists have conducted aerial surveys of spawning salmon in the Hanford Reach since 1948. This report summarizes data on fall chinook salmon spawning in the Hanford Reach and presents a discussion of factors that may affect population trends. Most data are limited to fisheries agency reports and other working documents. Fisheries management practices in the Columbia River system have changed rapidly over the last decade, particularly under requirements of the Pacific Northwest Power Planning and Conservation Act of 1980. New information has been generated and included in this report. 75 refs., 17 figs., 11 tabs.

  18. TREATMENT TANK CORROSION STUDIES FOR THE ENHANCED CHEMICAL CLEANING PROCESS

    Energy Technology Data Exchange (ETDEWEB)

    Wiersma, B.

    2011-08-24

    Radioactive waste is stored in high level waste tanks on the Savannah River Site (SRS). Savannah River Remediation (SRR) is aggressively seeking to close the non-compliant Type I and II waste tanks. The removal of sludge (i.e., metal oxide) heels from the tank is the final stage in the waste removal process. The Enhanced Chemical Cleaning (ECC) process is being developed and investigated by SRR to aid in Savannah River Site (SRS) High-Level Waste (HLW) as an option for sludge heel removal. Corrosion rate data for carbon steel exposed to the ECC treatment tank environment was obtained to evaluate the degree of corrosion that occurs. These tests were also designed to determine the effect of various environmental variables such as temperature, agitation and sludge slurry type on the corrosion behavior of carbon steel. Coupon tests were performed to estimate the corrosion rate during the ECC process, as well as determine any susceptibility to localized corrosion. Electrochemical studies were performed to develop a better understanding of the corrosion mechanism. The tests were performed in 1 wt.% and 2.5 wt.% oxalic acid with HM and PUREX sludge simulants. The following results and conclusions were made based on this testing: (1) In 1 wt.% oxalic acid with a sludge simulant, carbon steel corroded at a rate of less than 25 mpy within the temperature and agitation levels of the test. No susceptibility to localized corrosion was observed. (2) In 2.5 wt.% oxalic acid with a sludge simulant, the carbon steel corrosion rates ranged between 15 and 88 mpy. The most severe corrosion was observed at 75 C in the HM/2.5 wt.% oxalic acid simulant. Pitting and general corrosion increased with the agitation level at this condition. No pitting and lower general corrosion rates were observed with the PUREX/2.5 wt.% oxalic acid simulant. The electrochemical and coupon tests both indicated that carbon steel is more susceptible to localized corrosion in the HM/oxalic acid environment than

  19. TREATMENT TANK CORROSION STUDIES FOR THE ENHANCED CHEMICAL CLEANING PROCESS

    Energy Technology Data Exchange (ETDEWEB)

    Wiersma, B.

    2011-08-24

    Radioactive waste is stored in high level waste tanks on the Savannah River Site (SRS). Savannah River Remediation (SRR) is aggressively seeking to close the non-compliant Type I and II waste tanks. The removal of sludge (i.e., metal oxide) heels from the tank is the final stage in the waste removal process. The Enhanced Chemical Cleaning (ECC) process is being developed and investigated by SRR to aid in Savannah River Site (SRS) High-Level Waste (HLW) as an option for sludge heel removal. Corrosion rate data for carbon steel exposed to the ECC treatment tank environment was obtained to evaluate the degree of corrosion that occurs. These tests were also designed to determine the effect of various environmental variables such as temperature, agitation and sludge slurry type on the corrosion behavior of carbon steel. Coupon tests were performed to estimate the corrosion rate during the ECC process, as well as determine any susceptibility to localized corrosion. Electrochemical studies were performed to develop a better understanding of the corrosion mechanism. The tests were performed in 1 wt.% and 2.5 wt.% oxalic acid with HM and PUREX sludge simulants. The following results and conclusions were made based on this testing: (1) In 1 wt.% oxalic acid with a sludge simulant, carbon steel corroded at a rate of less than 25 mpy within the temperature and agitation levels of the test. No susceptibility to localized corrosion was observed. (2) In 2.5 wt.% oxalic acid with a sludge simulant, the carbon steel corrosion rates ranged between 15 and 88 mpy. The most severe corrosion was observed at 75 C in the HM/2.5 wt.% oxalic acid simulant. Pitting and general corrosion increased with the agitation level at this condition. No pitting and lower general corrosion rates were observed with the PUREX/2.5 wt.% oxalic acid simulant. The electrochemical and coupon tests both indicated that carbon steel is more susceptible to localized corrosion in the HM/oxalic acid environment than

  20. Study of parameters affecting enhanced coal bed methane

    Energy Technology Data Exchange (ETDEWEB)

    Katyal, S.; Valix, M.; Thambimuthu, K. [University of Sydney, Sydney, NSW (Australia). Dept. of Chemical Engineering

    2007-02-15

    Laboratory and field scale trials conducted so far indicate that injection of CO{sub 2} and N{sub 2} into deep coalbeds has the potential to enhance coalbed methane (ECBM) recovery while simultaneously sequestering CO{sub 2}. The work has identified that the fundamental processes involved in CO{sub 2} sequestration/CBM recovery in deep coalbeds are not fully understood and further research is needed to advance this technology. ECBM is affected by several parameters; prominent among them are coal characteristics, in-situ conditions prevailing in deep coalbeds, and changes arising from the interaction of coal with various fluids. These parameters do not act independently, thereby making it difficult to isolate their impacts separately. An attempt has been made in this article to classify these parameters and understand their role in ECBM. Past work in this area is reviewed and the future work that is critical for an improved understanding of ECBM recovery is discussed.

  1. Nitrate and phosphate removal through enhanced bioretention media: mesocosm study.

    Science.gov (United States)

    Palmer, Eric T; Poor, Cara J; Hinman, Curtis; Stark, John D

    2013-09-01

    Bioretention is an evolving type of Green Stormwater Infrastructure (GSI) designed to attenuate peak flows, reduce stormwater volume, and treat stormwater. This article examines the capabilities of a bioretention soil mixture of sand and compost enhanced with aluminum-based drinking water treatment residuals to reduce nutrients from stormwater runoff. Columns with and without a saturation zone and vegetation were compared to examine their role in removing nitrate and ortho-phosphate from stormwater. Results show that utilization of a saturation zone can significantly reduce nitrate in effluent water (71% compared to 33% without a saturated zone), even in a newly constructed system. However, ortho-phosphate reduction was significantly better in the columns without a saturated zone (80%) compared to columns with (67%). Plants did not significantly improve removal. This suggests amendments such as aluminum-based water treatment residuals for phosphorus removal and a saturation zone for nitrogen removal are needed during the initial establishment period.

  2. Enhancing cognition with video games: a multiple game training study.

    Directory of Open Access Journals (Sweden)

    Adam C Oei

    Full Text Available BACKGROUND: Previous evidence points to a causal link between playing action video games and enhanced cognition and perception. However, benefits of playing other video games are under-investigated. We examined whether playing non-action games also improves cognition. Hence, we compared transfer effects of an action and other non-action types that required different cognitive demands. METHODOLOGY/PRINCIPAL FINDINGS: We instructed 5 groups of non-gamer participants to play one game each on a mobile device (iPhone/iPod Touch for one hour a day/five days a week over four weeks (20 hours. Games included action, spatial memory, match-3, hidden- object, and an agent-based life simulation. Participants performed four behavioral tasks before and after video game training to assess for transfer effects. Tasks included an attentional blink task, a spatial memory and visual search dual task, a visual filter memory task to assess for multiple object tracking and cognitive control, as well as a complex verbal span task. Action game playing eliminated attentional blink and improved cognitive control and multiple-object tracking. Match-3, spatial memory and hidden object games improved visual search performance while the latter two also improved spatial working memory. Complex verbal span improved after match-3 and action game training. CONCLUSION/SIGNIFICANCE: Cognitive improvements were not limited to action game training alone and different games enhanced different aspects of cognition. We conclude that training specific cognitive abilities frequently in a video game improves performance in tasks that share common underlying demands. Overall, these results suggest that many video game-related cognitive improvements may not be due to training of general broad cognitive systems such as executive attentional control, but instead due to frequent utilization of specific cognitive processes during game play. Thus, many video game training related improvements to

  3. Passage and survival probabilities of juvenile Chinook salmon at Cougar Dam, Oregon, 2012

    Science.gov (United States)

    Beeman, John W.; Evans, Scott D.; Haner, Philip V.; Hansel, Hal C.; Hansen, Amy C.; Smith, Collin D.; Sprando, Jamie M.

    2014-01-01

    This report describes studies of juvenile-salmon dam passage and apparent survival at Cougar Dam, Oregon, during two operating conditions in 2012. Cougar Dam is a 158-meter tall rock-fill dam used primarily for flood control, and passes water through a temperature control tower to either a powerhouse penstock or to a regulating outlet (RO). The temperature control tower has moveable weir gates to enable water of different elevations and temperatures to be drawn through the dam to control water temperatures downstream. A series of studies of downstream dam passage of juvenile salmonids were begun after the National Oceanic and Atmospheric Administration determined that Cougar Dam was impacting the viability of anadromous fish stocks. The primary objectives of the studies described in this report were to estimate the route-specific fish passage probabilities at the dam and to estimate the survival probabilities of fish passing through the RO. The first set of dam operating conditions, studied in November, consisted of (1) a mean reservoir elevation of 1,589 feet, (2) water entering the temperature control tower through the weir gates, (3) most water routed through the turbines during the day and through the RO during the night, and (4) mean RO gate openings of 1.2 feet during the day and 3.2 feet during the night. The second set of dam operating conditions, studied in December, consisted of (1) a mean reservoir elevation of 1,507 ft, (2) water entering the temperature control tower through the RO bypass, (3) all water passing through the RO, and (4) mean RO gate openings of 7.3 feet during the day and 7.5 feet during the night. The studies were based on juvenile Chinook salmon (Oncorhynchus tshawytscha) surgically implanted with radio transmitters and passive integrated transponder (PIT) tags. Inferences about general dam passage percentage and timing of volitional migrants were based on surface-acclimated fish released in the reservoir. Dam passage and apparent

  4. Epigenomic model of cardiac enhancers with application to genome wide association studies.

    Science.gov (United States)

    Sahu, Avinash Das; Aniba, Radhouane; Chang, Yen-Pei Christy; Hannenhalli, Sridhar

    2013-01-01

    Mammalian gene regulation is often mediated by distal enhancer elements, in particular, for tissue specific and developmental genes. Computational identification of enhancers is difficult because they do not exhibit clear location preference relative to their target gene and also because they lack clearly distinguishing genomic features. This represents a major challenge in deciphering transcriptional regulation. Recent ChIP-seq based genome-wide investigation of epigenomic modifications have revealed that enhancers are often enriched for certain epigenomic marks. Here we utilize the epigenomic data in human heart tissue along with validated human heart enhancers to develop a Support Vector Machine (SVM) model of cardiac enhancers. Cross-validation classification accuracy of our model was 84% and 92% on positive and negative sets respectively with ROC AUC = 0.92. More importantly, while P300 binding has been used as gold standard for enhancers, our model can distinguish P300-bound validated enhancers from other P300-bound regions that failed to exhibit enhancer activity in transgenic mouse. While GWAS studies reveal polymorphic regions associated with certain phenotypes, they do not immediately provide causality. Next, we hypothesized that genomic regions containing a GWAS SNP associated with a cardiac phenotype might contain another SNP in a cardiac enhancer, which presumably mediates the phenotype. Starting with a comprehensive set of SNPs associated with cardiac phenotypes in GWAS studies, we scored other SNPs in LD with the GWAS SNP according to its probability of being an enhancer and choose one with best score in the LD as enhancer. We found that our predicted enhancers are enriched for known cardiac transcriptional regulator motifs and are likely to regulate the nearby gene. Importantly, these tendencies are more favorable for the predicted enhancers compared with an approach that uses P300 binding as a marker of enhancer activity.

  5. Salmon River Habitat Enhancement, 1989 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rowe, Mike

    1989-04-01

    This project was funded by the Bonneville Power Administration (BPA). The annual report contains three individual subproject papers detailing tribal fisheries work completed during the summer and fall of 1989. Subproject 1 contains summaries of evaluation/monitoring efforts associated with the Bear Valley Creek, Idaho enhancement project. Subproject 2 contains an evaluation of the Yankee Fork of the Salmon River habitat enhancement project. This report has been sub-divided into two parts: Part 1; stream evaluation and Part 2; pond series evaluation. Subproject 3 concerns the East Fork of the Salmon River, Idaho. This report summarizes the evaluation of the project to date including the 1989 pre-construction evaluation conducted within the East Fork drainage. Dredge mining has degraded spawning and rearing habitat for chinook salmon and steelhead trout in the Yankee Fork drainage of the Salmon River and in Bear Valley Creek. Mining, agricultural, and grazing practices degraded habitat in the East Fork of the Salmon River. Biological monitoring of the success of habitat enhancement for Bear Valley Creek and Yankee Fork are presented in this report. Physical and biological inventories prior to habitat enhancement in East Fork were also conducted. Four series of off-channel ponds of the Yankee Fork are shown to provide effective rearing habitat for chinook salmon. 45 refs., 49 figs., 24 tabs.

  6. Juvenile Chinook Salmon abundance in the northern Bering Sea: Implications for future returns and fisheries in the Yukon River

    Science.gov (United States)

    Murphy, James M.; Howard, Kathrine G.; Gann, Jeanette C.; Cieciel, Kristin C.; Templin, William D.; Guthrie, Charles M.

    2017-01-01

    Juvenile Chinook Salmon (Oncorhynchus tshawytscha) abundance in the northern Bering Sea is used to provide insight into future returns and fisheries in the Yukon River. The status of Yukon River Chinook Salmon is of concern due to recent production declines and subsequent closures of commercial, sport, and personal use fisheries, and severe restrictions on subsistence fisheries in the Yukon River. Surface trawl catch data, mixed layer depth adjustments, and genetic stock mixtures are used to estimate juvenile abundance for the Canadian-origin stock group from the Yukon River. Abundance ranged from a low of 0.62 million in 2012 to a high of 2.58 million in 2013 with an overall average of 1.5 million from 2003 to 2015. Although abundance estimates indicate that average survival is relatively low (average of 5.2%), juvenile abundance was significantly correlated (r=0.87, p=0.005) with adult returns, indicating that much of the variability in survival occurs during early life-history stages (freshwater and initial marine). Juvenile abundance in the northern Bering Sea has increased since 2013 due to an increase in early life-history survival (average juveniles-per-spawner increased from 29 to 59). The increase in juvenile abundance is projected to produce larger runs and increased subsistence fishing opportunities for Chinook Salmon in the Yukon River as early as 2016.

  7. Modeling Fall Run Chinook Salmon Populations in the San Joaquin River Basin Using an Artificial Neural Network

    Science.gov (United States)

    Keyantash, J.; Quinn, N. W.; Hidalgo, H. G.; Dracup, J. A.

    2002-12-01

    The number of chinook salmon returning to spawn during the fall run (September-November) were separately modeled for three San Joaquin River tributaries-the Stanislaus, Tuolumne, and Merced Rivers-to determine the sensitivity of salmon populations to hydrologic alterations associated with potential climate change. The modeling was accomplished using a feed-forward artificial neural network (ANN) with error backpropagation. Inputs to the ANN included modeled monthly river temperature and streamflow data for each tributary, and were lagged multiple years to include the effects of antecedent environmental conditions upon populations of salmon throughout their life histories. Temperature and streamflow conditions at downstream locations in each tributary were computed using the California Dept. of Water Resources' DSM-2 model. Inputs to the DSM-2 model originated from regional climate modeling under a CO2 doubling scenario. Annual population data for adult chinook salmon (1951-present) were provided by the California Dept. of Fish and Game, and were used for supervised training of the ANN. It was determined that Stanislaus, Tuolumne and Merced River chinook runs could be impacted by alterations to the hydroclimatology of the San Joaquin basin.

  8. Survey of pathogens in hatchery Chinook salmon with different out-migration histories through the Snake and Columbia rivers.

    Science.gov (United States)

    Van Gaest, A L; Dietrich, J P; Thompson, D E; Boylen, D A; Strickland, S A; Collier, T K; Loge, F J; Arkoosh, M R

    2011-06-01

    The operation of the Federal Columbia River Power System (FCRPS) has negatively affected threatened and endangered salmonid populations in the Pacific Northwest. Barging Snake River spring Chinook salmon Oncorhynchus tshawytscha through the FCRPS is one effort to mitigate the effect of the hydrosystem on juvenile salmon out-migration. However, little is known about the occurrence and transmission of infectious agents in barged juvenile salmon relative to juvenile salmon that remain in-river to navigate to the ocean. We conducted a survey of hatchery-reared spring Chinook salmon at various points along their out-migration path as they left their natal hatcheries and either migrated in-river or were barged through the FCRPS. Salmon kidneys were screened by polymerase chain reaction for nine pathogens and one family of water molds. Eight pathogens were detected; the most prevalent were Renibacterium salmoninarum and infectious hematopoietic necrosis virus. Species in the family Saprolegniaceae were also commonly detected. Pathogen prevalence was significantly greater in fish that were barged through the FCRPS than in fish left to out-migrate in-river. These results suggest that the transmission of infectious agents to susceptible juvenile salmon occurs during the barging process. Therefore, management activities that reduce pathogen exposure during barging may increase the survival of juvenile Chinook salmon after they are released.

  9. Warm Springs National Fish Hatchery evaluation and anadromous fish study on the Warm Springs Indian Reservation of Oregon: 1975-1989

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — In 1975 the USFWS began studies designed to define the biological characteristics of wild spring chinook (Oncorhynchus tshawytscha) and steelhead (O. mykiss) in the...

  10. 2005 Evaluation of Chum, Chinook and Coho Salmon Entrapment near Ives Island in the Columbia River; 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Wilson, Jeremy; Duston, Reed A. (Pacific States Marine Fisheries Commission, Vancouver, WA)

    2006-01-01

    During mid-1990s, Pacific States Marine Fisheries Commission (PSMFC) and Washington Department of Fish and Wildlife (WDFW) identified several populations of salmon spawning approximately three miles downstream of Bonneville Dam on the Columbia River. These populations are exposed to rapidly changing flow regimes associated with Bonneville Dam's operation. This study investigated the relationship between changing water levels and stranding or entrapment of juvenile salmon in the Ives Island area. Walking surveys of the Ives Island and Pierce Island shorelines were conducted every one to three days throughout the juvenile emigration period. The nearby shorelines of the Washington and Oregon mainland were also surveyed. Between January and June of 2005, surveyors examined 21 substantial entrapments and 20 stranding sites. A total of 14,337 salmonids, made up of three species, were found either entrapped or stranded. Nearly 92% of the salmonids were chinook salmon (Oncorhynchus tshawytscha), 4.5% were federally listed chum salmon (Oncorhynchus keta), and 3.8% were coho salmon (Oncorhynchus kisutch). When compared to the 2004 study year, 2005 showed an 83% increase in the overall number of observed entrapped or stranded juvenile salmon. Much of this increase can be attributed to one entrapment found along the north shore of Pierce Island (identified as E501). E501 has historically been known to contain relatively large numbers of entrapped salmon. Even so, the number of entrapped salmon observed during 2005 was a 732% increase (5926) over any prior study years. Over 83% of all chum, 63.1% of all chinook, and 63.2% of all coho sampled during 2005 were retrieved from entrapments that were likely to have formed when Bonneville Dam tailwater levels dropped to elevations between 11.5 and 12.9 feet. Peak numbers of chum and chinook were sampled in mid-April when tailwater levels ranged between 11.6ft and 15.6ft. Peak numbers of coho were sampled during the last week of

  11. 重组鱼类生长激素对中国对虾成活率及促生长作用的研究%STUDIES OF THE EFFECTS OF RECOMBINANT FISH GROWTH HORMONE ON SURVIVAL AND GROWTH ENHANCEMENT OF CHINESE PRAWN Penaeus chinensis

    Institute of Scientific and Technical Information of China (English)

    徐斌; 苗宏志; 麦康森; 张培军; 徐永立

    2000-01-01

    The diet containing yeast expressing recombinant Chinook salmon growth hormone (rcsGH) was fed to juvenile Chinese prawn (Penaeus chinensis) for 50 days in the experiment. The results first indicated that the additions of both 10 ng and 100 ng rcsGH/g diet significantly promoted the growth of juvenile prawn (weight gains significantly increased compared to controls and the effect was dose-dependent). In addition, the prawn fed the diet containing rcsGH exhibited the improved survival rate (with 2-fold survival rate that of controls) . The experiments provided the basis of application of recombinant fish growth hormone on growth and survival enhancements of cultured Chinese prawn.

  12. CASE STUDY FOR ENHANCED ACCIDENT TOLERANCE DESIGN CHANGES

    Energy Technology Data Exchange (ETDEWEB)

    Prescott, Steven [Idaho National Laboratory; Smith, Curtis [Idaho National Laboratory; Koonce, Tony

    2014-09-01

    The ability to better characterize and quantify safety margin is important to improved decision making about Light Water Reactor (LWR) design, operation, and plant life extension. A systematic approach to characterization of safety margins and the subsequent margin management options represents a vital input to the licensee and regulatory analysis and decision making that will be involved. In addition, as research and development in the LWR Sustainability (LWRS) Program and other collaborative efforts yield new data, sensors, and improved scientific understanding of physical processes that govern the aging and degradation of plant SSCs needs and opportunities to better optimize plant safety and performance will become known. To support decision making related to economics, readability, and safety, the Risk Informed Safety Margin Characterization (RISMC) Pathway provides methods and tools that enable mitigation options known as risk informed margins management (RIMM) strategies. The methods and tools provided by RISMC are essential to a comprehensive and integrated RIMM approach that supports effective preservation of margin for both active and passive SSCs. In this report, we discuss the methods and technologies behind RIMM for an application focused on enhanced accident tolerance design changes for a representative nuclear power plant. We look at a variety of potential plant modifications and evaluate, using the RISMC approach, the implications to safety margin for the various strategies.

  13. Enhanced Component Performance Study: Emergency Diesel Generators 1998–2014

    Energy Technology Data Exchange (ETDEWEB)

    Schroeder, John Alton [Idaho National Lab. (INL), Idaho Falls, ID (United States)

    2015-11-01

    This report presents an enhanced performance evaluation of emergency diesel generators (EDGs) at U.S. commercial nuclear power plants. This report evaluates component performance over time using (1) Institute of Nuclear Power Operations (INPO) Consolidated Events Database (ICES) data from 1998 through 2014 and (2) maintenance unavailability (UA) performance data from Mitigating Systems Performance Index (MSPI) Basis Document data from 2002 through 2014. The objective is to show estimates of current failure probabilities and rates related to EDGs, trend these data on an annual basis, determine if the current data are consistent with the probability distributions currently recommended for use in NRC probabilistic risk assessments, show how the reliability data differ for different EDG manufacturers and for EDGs with different ratings; and summarize the subcomponents, causes, detection methods, and recovery associated with each EDG failure mode. Engineering analyses were performed with respect to time period and failure mode without regard to the actual number of EDGs at each plant. The factors analyzed are: sub-component, failure cause, detection method, recovery, manufacturer, and EDG rating. Six trends with varying degrees of statistical significance were identified in the data.

  14. Enhanced Component Performance Study. Emergency Diesel Generators 1998–2013

    Energy Technology Data Exchange (ETDEWEB)

    Schroeder, John Alton [Idaho National Lab. (INL), Idaho Falls, ID (United States)

    2014-11-01

    This report presents an enhanced performance evaluation of emergency diesel generators (EDGs) at U.S. commercial nuclear power plants. This report evaluates component performance over time using Institute of Nuclear Power Operations (INPO) Consolidated Events Database (ICES) data from 1998 through 2013 and maintenance unavailability (UA) performance data using Mitigating Systems Performance Index (MSPI) Basis Document data from 2002 through 2013. The objective is to present an analysis of factors that could influence the system and component trends in addition to annual performance trends of failure rates and probabilities. The factors analyzed for the EDG component are the differences in failures between all demands and actual unplanned engineered safety feature (ESF) demands, differences among manufacturers, and differences among EDG ratings. Statistical analyses of these differences are performed and results showing whether pooling is acceptable across these factors. In addition, engineering analyses were performed with respect to time period and failure mode. The factors analyzed are: sub-component, failure cause, detection method, recovery, manufacturer, and EDG rating.

  15. Technology-Enhanced Mathematics Education for Creative Engineering Studies

    OpenAIRE

    Triantafyllou, Eva; Timcenko, Olga

    2014-01-01

    This project explores the opportunities and challenges of integrating digital technologies in mathematics education in creative engineering studies. Students in such studies lack motivation and do not perceive the mathematics the same way as mathematics students do. Digital technologies offer new possibilities for mathematics representation, for interacting with mathematical concepts, and for positioning mathematics in the context of their studies. First, we are going to investigate how mathe...

  16. Enhancing Information Systems Students' Soft Skill – a Case Study

    Directory of Open Access Journals (Sweden)

    Aharon Yadin

    2012-10-01

    Full Text Available Information Systems (IS curricula should provide students with both technical and non-technical (soft skills. The technical aspects are covered by various courses. However, soft skills like teamwork, interpersonal communication, presentation delivery, and others are hardly covered. Employers, who consider both technical and soft skills to be equally important, search for professional Information Systems employees possessing both sets of skills. These employers often complain that finding an IS graduate with both types of skills is quite difficult. The IS 2010 Model Curriculum refers to both types of skills, considering them an essential part of the graduate knowledge base. However, in many cases the soft skills are not sufficiently addressed, and even if they are, it is not necessarily in the context of software development projects. The Systems Analysis and Design (SAD course provides an important foundation for the IS profession. This is especially true due to the emerging role of the programmer-analyst who is responsible not only for programming but also for some analysis work. In order to strengthen the soft skills in the context of system analysis and design, we suggest a workshop structure emphasizing these soft skills while students analyze and design a complete information system. Our SAD workshop includes some face to face lectures and team-based collaborations. The students undertake many online activities, including teamwork, interviews with simulated clients, team-based peer reviews, presentation delivery, and so forth. The workshop employs a grade difference calculation mechanism that revealed, along with the students' reflections, that the workshop structure enhanced the students' ability to cope with the workshop assignments while strengthening their soft skills and preparing them for their future analysis and design challenges.

  17. Study on Enhancing nuclear security cooperation in Northeast Asia

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Jounghoon; Heo, Chul [Korea Institute of Nuclear Non-proliferation and Control, Daejeon (Korea, Republic of)

    2015-10-15

    Regional and global cooperation in nuclear security was urged. Nevertheless, it is hard to seek a successful example of regional cooperation in nuclear security, with the exception of EURATOM. Northeast Asia which includes China, Russia, Japan, ROK and, DPRK has many nuclear issues. For example, the concerns of the international community were raised when the DPRK has conducted three nuclear tests. Countries in this region also possess many nuclear power plants and materials. However, there has been no attempt at creating a community or organization for multinational security in this region. In this paper, we discuss various ways of enhancing nuclear security cooperation in Northeast Asia. We begin with an examination of current global, regional and national nuclear security cooperation efforts. We then discuss directions and strategies for nuclear security cooperation in Northeast Asia, and offer some detailed cooperation agendas to be considers. Northeast Asia countries have tried to cooperate in many areas such as energy, environment, economy, and policy. However, nuclear security issues have not been discussed seriously. We need to start cooperating on nuclear security issues, because a nuclear security event may affect several countries. One country may not be able to respond to such an event independently. In order to gain cooperate in nuclear security, we have to be able to suggest pertinent agendas to Northeast Asia countries. R and D, education and training of nuclear security may be a good suggestion for starting cooperation. And more practical and detailed agendas such as joint response and information sharing may be suggested for cooperation strengthening.

  18. Implementing enhanced recovery after bariatric surgery protocol: a retrospective study.

    Science.gov (United States)

    Proczko, Monika; Kaska, Lukasz; Twardowski, Pawel; Stepaniak, Pieter

    2016-02-01

    While the demand for bariatric surgery is increasing, hospital capacity remains limited. The ERABS (Enhanced Recovery After Bariatric Surgery) protocol has been implemented in a number of bariatric centers. We retrospectively compared the operating room logistics and postoperative complications between pre-ERABS and ERABS periods in an academic hospital. The primary endpoint was the length of stay in hospital. The secondary endpoints were turnover times-the time required for preparing the operating room for the next case, induction time (from induction of anesthesia until a patient is ready for surgery), surgical time (duration of surgery), procedure time (duration of stay in the operating room), and the incidence of re-admissions, re-operations and complications during admission and within 30 days after surgery. Of a total of 374 patients, 228 and 146 received surgery following the pre-ERABS and ERABS protocols, respectively. The length of hospital stay was significantly shortened from 3.7 (95 % confidence interval [CI] 3.1-4.7) days to 2.1 (95 % CI 1.6-2.6) days (P surgery, respectively (P < 0.001 for both), by introducing the ERABS protocol. Induction times were reduced from 15.2 (95 % CI 14.3-16.1) min to 12.5 (95 % CI 11.7-13.3) min (P < 0.001).Turnover times were shortened significantly from 38 (95 % CI 44-32) min to 11 (95 % CI 8-14) min. The incidence of re-operations, re-admissions and complications did not change.

  19. Snake River Fall Chinook Salmon Life History Investigations, Annual Report 2007.

    Energy Technology Data Exchange (ETDEWEB)

    Tiffan, Kenneth F. [U.S. Geological Survey; Connor, William P. [U.S. Fish and Wildlife Service; McMichael, Geoffrey A. [Pacific Northwest National Laboratory

    2009-08-21

    In 2007, we used radio and acoustic telemetry to evaluate the migratory behavior, survival, mortality, and delay of subyearling fall Chinook salmon in the Clearwater River and Lower Granite Reservoir. Monthly releases of radio-tagged fish ({approx}95/month) were made from May through October and releases of 122-149/month acoustic-tagged fish per month were made from August through October. We compared the size at release of our tagged fish to that which could have been obtained at the same time from in-river, beach seine collections made by the Nez Perce Tribe. Had we relied on in-river collections to obtain our fish, we would have obtained very few in June from the free-flowing river but by late July and August over 90% of collected fish in the transition zone were large enough for tagging. Detection probabilities of radio-tagged subyearlings were generally high ranging from 0.60 (SE=0.22) to 1.0 (SE=0) in the different study reaches and months. Lower detection probabilities were observed in the confluence and upper reservoir reaches where fewer fish were detected. Detection probabilities of acoustic-tagged subyearlings were also high and ranged from 0.86 (SE=0.09) to 1.0 (SE=0) in the confluence and upper reservoir reaches during August through October. Estimates of the joint probability of migration and survival generally declined in a downstream direction for fish released from June through August. Estimates were lowest in the transition zone (the lower 7 km of the Clearwater River) for the June release and lowest in the confluence area for July and August releases. The joint probability of migration and survival in these reaches was higher for the September and October releases, and were similar to those of fish released in May. Both fish weight and length at tagging were significantly correlated with the joint probability of migrating and surviving for both radio-tagged and acoustic-tagged fish. For both tag types, fish that were heavier at tagging had a

  20. Snake River Fall Chinook Salmon Life History Investigations, Annual Report 2007.

    Energy Technology Data Exchange (ETDEWEB)

    Tiffan, Kenneth F. [U.S. Geological Survey; Connor, William P. [U.S. Fish and Wildlife Service; McMichael, Geoffrey A. [Pacific Northwest National Laboratory

    2009-08-21

    In 2007, we used radio and acoustic telemetry to evaluate the migratory behavior, survival, mortality, and delay of subyearling fall Chinook salmon in the Clearwater River and Lower Granite Reservoir. Monthly releases of radio-tagged fish ({approx}95/month) were made from May through October and releases of 122-149/month acoustic-tagged fish per month were made from August through October. We compared the size at release of our tagged fish to that which could have been obtained at the same time from in-river, beach seine collections made by the Nez Perce Tribe. Had we relied on in-river collections to obtain our fish, we would have obtained very few in June from the free-flowing river but by late July and August over 90% of collected fish in the transition zone were large enough for tagging. Detection probabilities of radio-tagged subyearlings were generally high ranging from 0.60 (SE=0.22) to 1.0 (SE=0) in the different study reaches and months. Lower detection probabilities were observed in the confluence and upper reservoir reaches where fewer fish were detected. Detection probabilities of acoustic-tagged subyearlings were also high and ranged from 0.86 (SE=0.09) to 1.0 (SE=0) in the confluence and upper reservoir reaches during August through October. Estimates of the joint probability of migration and survival generally declined in a downstream direction for fish released from June through August. Estimates were lowest in the transition zone (the lower 7 km of the Clearwater River) for the June release and lowest in the confluence area for July and August releases. The joint probability of migration and survival in these reaches was higher for the September and October releases, and were similar to those of fish released in May. Both fish weight and length at tagging were significantly correlated with the joint probability of migrating and surviving for both radio-tagged and acoustic-tagged fish. For both tag types, fish that were heavier at tagging had a

  1. DBT-Enhanced Cognitive Behavioral Therapy for Adolescent Trichotillomania: An Adolescent Case Study

    Science.gov (United States)

    Welch, Stacy Shaw; Kim, Junny

    2012-01-01

    Results and a case study for a DBT-enhanced habit reversal treatment (HRT) for adult trichotillomania (TTM) (Keuthen & Sprich, 2012) is adapted for use with adolescents. Trichotillomania in adolescence is a very important but understudied problem. Onset often occurs in adolescence, and yet very little treatment research exists. DBT-enhanced habit…

  2. Lakewide estimates of alewife biomass and Chinook salmon abundance and consumption in Lake Ontario, 1989–2005: implications for prey fish sustainability

    Science.gov (United States)

    Murry, Brent A.; Connerton, Michael J.; O'Gorman, Robert; Stewart, Donald J.; Ringlerd, Neil H.

    2010-01-01

    Stocking levels of Chinook salmon Oncorhynchus tshawytscha for Lake Ontario have been highly controversial since the early 1990s, largely because of uncertainties about lakewide abundance and rates of prey consumption. Previous estimates have focused on years before 1995; since then, however, the Lake Ontario ecosystem has undergone substantial changes, and there is new evidence of extensive natural recruitment. Presented here are new abundance estimates of Chinook salmon and alewives Alosa pseudoharengus in Lake Ontario and a reevaluation of the potential risk of alewife population collapse. We found that Lake Ontario has been supporting, on average (1989–2005), 1.83 × 106 (range, 1.08 × 106 to 3.24 × 106) Chinook salmon of ages 1–4, amounting to a mean annual biomass of 11.33 × 103 metric tons (range, 5.83 × 103 to 23.04 × 103 metric tons). During the same period (1989–2005), the lake supported an alewife biomass of 173.66 × 103 metric tons (range, 62.37 × 103 to 345.49 × 103 metric tons); Chinook salmon of ages 1–4 consumed, on average, 22% (range, 11–44%) of the alewife biomass annually. Because our estimates probably underestimate total consumption and because Chinook salmon are only one of several salmonine species that depend on alewives, predation pressure on the Lake Ontario alewife population may be high enough to raise concerns about long-term stability of this predator–prey system.

  3. A Successful International Cooperation-Enhancing Oil Recovery Feasibility Study

    Institute of Scientific and Technical Information of China (English)

    Wang Dechen

    1994-01-01

    @@ In 1985 Yumen Petroleum Administration Bureau and Institute Francais du Petrole signed a science-technology cooperation agreement on surface active agent-polymer flood feasibility study in the reservoir L of Laojunmiao Oilfield.

  4. Technology-Enhanced Mathematics Education for Creative Engineering Studies

    DEFF Research Database (Denmark)

    Triantafyllou, Eva; Timcenko, Olga

    2014-01-01

    This project explores the opportunities and challenges of integrating digital technologies in mathematics education in creative engineering studies. Students in such studies lack motivation and do not perceive the mathematics the same way as mathematics students do. Digital technologies offer new...... possibilities for mathematics representation, for interacting with mathematical concepts, and for positioning mathematics in the context of their studies. First, we are going to investigate how mathematics is used in their professional and academic work, and how important mathematical concepts...... are conceptualized. Then, we are going to apply this field data in designing learning technologies, which will be introduced in university classrooms. The effect of this introduction will be evaluated through educational design experiments....

  5. Instructional Set, Deep Relaxation and Growth Enhancement: A Pilot Study

    Science.gov (United States)

    Leeb, Charles; And Others

    1976-01-01

    This study provides experimental evidence that instructional set can influence access to altered states of consciousness. Fifteen male subjects were randomly assigned to three groups, each of which received the same autogenic biofeedback training in hand temperature control, but each group received a different attitudinal set. (Editor)

  6. Study Abroad: Enhanced Learning Experience in Cultural Diversity

    Science.gov (United States)

    Jaoko, Japheth

    2010-01-01

    This paper examines how a study abroad experiential learning course in diversity provided a cultural immersion experience for a group of social work students from a small private university in central Kentucky. The students participated in a three-week international education experience in Kenya and reported this experience helped them become more…

  7. Enhancing Personal and Family Finance Courses Using Case Studies

    Science.gov (United States)

    Gudmunson, Clinton G.; Zuiker, Virginia Solis; Katras, Mary Jo; Sabri, Mohamad Fazli

    2015-01-01

    Growing financial concerns among college students and on college campuses suggests urgency in teaching personal finance more effectively. Active learning approaches to teaching, including the use of case studies, problem-based learning, group work, in-class writing, demonstrations, and so forth, may be more appropriate and useful when used to…

  8. A Case Study of Technology-Enhanced Historical Inquiry

    Science.gov (United States)

    Yang, Shu Ching

    2009-01-01

    The paper describes the integration of web resources and technology as instructional and learning tools in oral history projects. The computer-mediated oral history project centred around interviews with community elders combined with new technologies to engage students in authentic historical inquiry. The study examined learners' affective…

  9. Educator Study Groups: A Professional Development Tool to Enhance Inclusion

    Science.gov (United States)

    Herner-Patnode, Leah

    2009-01-01

    Professional development can take many forms. The most effective development includes individual educators in the formation and planning process. Educator study groups are one form of professional development that allows major stakeholders in the education process the autonomy to develop individual and group goals. This often translates into an…

  10. Isotopically modified nanoparticles for enhanced detection in bioaccumulation studies

    Science.gov (United States)

    Misra, S.K.; Dybowska, A.; Berhanu, D.; Croteau, M.-N.; Luoma, S.N.; Boccaccini, A.R.; Valsami-Jones, E.

    2012-01-01

    This work presents results on synthesis of isotopically enriched (99% 65Cu) copper oxide nanoparticles and its application in ecotoxicological studies. 65CuO nanoparticles were synthesized as spheres (7 nm) and rods (7 ?? 40 nm). Significant differences were observed between the reactivity and dissolution of spherical and rod shaped nanoparticles. The extreme sensitivity of the stable isotope tracing technique developed in this study allowed determining Cu uptake at exposure concentrations equivalent to background Cu concentrations in freshwater systems (0.2-30 ??g/L). Without a tracer, detection of newly accumulated Cu was impossible, even at exposure concentrations surpassing some of the most contaminated water systems (>1 mg/L). ?? 2011 American Chemical Society.

  11. Pulmonary functional MRI:an animal model study of oxygen-enhanced ventilation combined with Gd-DTPA-enhanced perfusion

    Institute of Scientific and Technical Information of China (English)

    杨健; 万明习; 郭佑民

    2004-01-01

    Background The assessment of regional pulmonary ventilation and perfusion is essential for the evaluation of a variety of lung disorders. Pulmonary ventilation MRI using inhaled oxygen as a contrast medium can be obtained with a clinical MR scanner, without additional equipment, and has been demonstrated to be a feasible means of assessing ventilation in animal models and some clinical patients. However, few studies have reported on MR ventilation-perfusion imaging. In this study, we evaluated the usefulness of oxygen-enhanced ventilation in combination with first-pass Gd-DTPA-enhanced perfusion MRI in a canine model of pulmonary embolism and airway obstruction.Methods Peripheral pulmonary embolisms were produced in eight dogs by intravenous injection of gelfoam strips at the pulmonary segmental arterial level, and airway obstructions were created in five of the dogs by inserting a self-designed balloon catheter into a secondary bronchus. Oxygen-enhanced MR ventilation images were produced by subtracting images from before and after inhalation of pure oxygen. Pulmonary perfusion MR images were acquired with a dynamic three-dimensional fast gradient-echo sequence. MR ventilation and perfusion images were read and contrasted with results from general examinations of pathological anatomy, ventilation-perfusion scintigraphy, and pulmonary angiography. Results Regions identified as having airway obstructions matched using both MR ventilation and perfusion imaging, but regions of pulmonary embolisms were mismatched. The area of airway obstruction defects was smaller using MR ventilation imagery than that using ventilation scintigraphy. Abnormal perfusion regions due to pulmonary embolisms were divided into defective regions and reduced regions based on the time course of signal intensity changes. In the diagnosis of pulmonary embolisms with the technique of ventilation and perfusion MRI, sensitivity and specificity were 75.0% and 98.1%, respectively, and the diagnostic

  12. Data Quality Studies of Enhanced Interferometric Gravitational Wave Detectors

    CERN Document Server

    McIver, Jessica

    2012-01-01

    Data quality assessment plays an essential role in the quest to detect gravitational wave signals in data from the LIGO and Virgo interferometric gravitational wave detectors. Interferometer data contains a high rate of noise transients from the environment, the detector hardware, and the detector control systems. These transients severely limit the statistical significance of gravitational wave candidates of short duration and/or poorly modeled waveforms. This paper describes the data quality studies that have been performed in recent LIGO and Virgo observing runs to mitigate the impact of transient detector artifacts on the gravitational wave searches.

  13. Nanostructured interfaces for enhancing mechanical properties of composites: Computational micromechanical studies

    DEFF Research Database (Denmark)

    Mishnaevsky, Leon

    2015-01-01

    Computational micromechanical studies of the effect of nanostructuring and nanoengineering of interfaces, phase and grain boundaries of materials on the mechanical properties and strength of materials and the potential of interface nanostructuring to enhance the materials properties are reviewed....

  14. Spring Chinook Salmon Interactions Indices and Residual/Precocial Monitoring in the Upper Yakima Basin; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Pearsons, Todd N.; James, Brenda B.; Johnson, Christopher L. (Washington Department of Fish and Wildlife, Olympia, WA)

    2003-05-01

    This report examines some of the factors that can influence the success of supplementation, which is currently being tested in the Yakima Basin using upper Yakima stock of spring chinook salmon. Supplementation success in the Yakima Basin is defined relative to four topic areas: natural production, genetics, ecological interactions, and harvest (Busack et al. 1997). The success of spring chinook salmon supplementation in the Yakima Basin is dependent, in part, upon fish culture practices and favorable physical and biological conditions in the natural environment (Busack et al. 1997). Shortfalls in either of these two topics (i.e., failure in culturing many fish that have high long-term fitness or environmental conditions that constrain spring chinook salmon production) will cause supplementation success to be limited. For example, inadvertent selection or propagation of spring chinook that residualize or precocially mature may hinder supplementation success. Spring chinook salmon that residualize (do not migrate during the normal migration period) may have lower survival rates than migrants and, additionally, may interact with wild fish and cause unacceptable impacts to non-target taxa. Large numbers of precocials (nonanadromous spawners) may increase competition for females and significantly skew ratios of offspring sired by nonanadromous males, which could result in more nonanadromous spring chinook in future generations. Conditions in the natural environment may also limit the success of spring chinook supplementation. For example, intra or interspecific competition may constrain spring chinook salmon production. Spring chinook salmon juveniles may compete with each other for food or space or compete with other species that have similar ecological requirements. Monitoring of spring chinook salmon residuals, precocials, prey abundance, carrying capacity, and competition will help researchers interpret why supplementation is working or not working (Busack et al

  15. Performance enhancement study of an electrostatic Faraday cup detector

    Energy Technology Data Exchange (ETDEWEB)

    Thomas, J.D. [Department of Physics and Astronomy, University of Toledo, Toledo, OH 43606-3390 (United States); Hodges, G.S. [Department of Physics and Astronomy, University of Toledo, Toledo, OH 43606-3390 (United States); Seely, D.G. [Department of Physics, Albion College, Albion, MI 49224 (United States); Moroz, N.A. [Department of Physics, Albion College, Albion, MI 49224 (United States); Kvale, T.J. [Department of Physics and Astronomy, University of Toledo, Toledo, OH 43606-3390 (United States)]. E-mail: tkvale@physics.utoledo.edu

    2005-01-01

    Faraday cups (FCs) have long been used to measure charged particle beam currents in experiments that seek to determine cross-sections in energetic particle collisions. The reliable operation of a FC as a detector depends on the ability of the device to recapture the electrons ejected when energetic particles strike its interior metal surfaces. We have conducted comparative performance studies of a traditional cylindrically-symmetric, electrostatic-based FC versus an alternative design in which the cylindrical symmetry is broken. The purpose of the alternative design is to generate a transverse electric field to recapture the ejected (secondary and tertiary) electrons. The alternate FC design is shown to be superior in its ability to recapture these electrons, including those having kinetic energies greater than the potential energy barrier determined by the repeller voltage applied to the FC.

  16. PRACTICAL STRATEGIES FOR ENHANCING INTERDISCIPLINARY COLLABORATION IN NEUROEDUCATIONAL STUDIES

    Directory of Open Access Journals (Sweden)

    Ali Nouri

    2013-12-01

    Full Text Available The need to overcome artificial obstructions and limitations in our scientific understanding of the complexity of educational issues is the major driver of interdisciplinary collaboration in the field of Neuroeducational Studies. To get full advantage of interdisciplinary collaboration therefore, it would be necessary to identify and develop a number of practical strategies that facilitate such endeavor. The relevance literature suggests that making effective interdisciplinary collaboration in the field is dependent on a number of factors, including: creating a common language and conceptual vocabulary; developing graduate educational programs; providing training programs for neuroscientists and educators; and developing neuroeducational research organizations. It is concluded that, interdisciplinary collaboration is a potential key that ensures a more prosperous future for the field and it will be best realized based on authentic dialogue among scientists and educators.

  17. ALTERNATIVE AND ENHANCED CHEMICAL CLEANING: BASIC STUDIES RESULTS FY2010

    Energy Technology Data Exchange (ETDEWEB)

    King, W.; Hay, M.

    2011-01-24

    In an effort to develop and optimize chemical cleaning methods for the removal of sludge heels from High Level Waste tanks, solubility tests have been conducted using nonradioactive, pure metal phases. The metal phases studied included the aluminum phase gibbsite and the iron phases hematite, maghemite, goethite, lepidocrocite, magnetite, and wustite. Many of these mineral phases have been identified in radioactive, High Level Waste sludge at the Savannah River and Hanford Sites. Acids evaluated for dissolution included oxalic, nitric, and sulfuric acids and a variety of other complexing organic acids. The results of the solubility tests indicate that mixtures of oxalic acid with either nitric or sulfuric acid are the most effective cleaning solutions for the dissolution of the primary metal phases in sludge waste. Based on the results, optimized conditions for hematite dissolution in oxalic acid were selected using nitric or sulfuric acid as a supplemental proton source. Electrochemical corrosion studies were also conducted (reported separately; Wiersma, 2010) with oxalic/mineral acid mixtures to evaluate the effects of these solutions on waste tank integrity. The following specific conclusions can be drawn from the test results: (1) Oxalic acid was shown to be superior to all of the other organic acids evaluated in promoting the dissolution of the primary sludge phases. (2) All iron phases showed similar solubility trends in oxalic acid versus pH, with hematite exhibiting the lowest solubility and the slowest dissolution. (3) Greater than 90% hematite dissolution occurred in oxalic/nitric acid mixtures within one week for two hematite sources and within three weeks for a third hematite sample with a larger average particle size. This dissolution rate appears acceptable for waste tank cleaning applications. (4) Stoichiometric dissolution of iron phases in oxalic acid (based on the oxalate concentration) and the formation of the preferred 1:1 Fe to oxalate complex

  18. ALTERNATIVE AND ENHANCED CHEMICAL CLEANING: BASIC STUDIES RESULTS FY2010

    Energy Technology Data Exchange (ETDEWEB)

    King, W.; Hay, M.

    2011-01-24

    In an effort to develop and optimize chemical cleaning methods for the removal of sludge heels from High Level Waste tanks, solubility tests have been conducted using nonradioactive, pure metal phases. The metal phases studied included the aluminum phase gibbsite and the iron phases hematite, maghemite, goethite, lepidocrocite, magnetite, and wustite. Many of these mineral phases have been identified in radioactive, High Level Waste sludge at the Savannah River and Hanford Sites. Acids evaluated for dissolution included oxalic, nitric, and sulfuric acids and a variety of other complexing organic acids. The results of the solubility tests indicate that mixtures of oxalic acid with either nitric or sulfuric acid are the most effective cleaning solutions for the dissolution of the primary metal phases in sludge waste. Based on the results, optimized conditions for hematite dissolution in oxalic acid were selected using nitric or sulfuric acid as a supplemental proton source. Electrochemical corrosion studies were also conducted (reported separately; Wiersma, 2010) with oxalic/mineral acid mixtures to evaluate the effects of these solutions on waste tank integrity. The following specific conclusions can be drawn from the test results: (1) Oxalic acid was shown to be superior to all of the other organic acids evaluated in promoting the dissolution of the primary sludge phases. (2) All iron phases showed similar solubility trends in oxalic acid versus pH, with hematite exhibiting the lowest solubility and the slowest dissolution. (3) Greater than 90% hematite dissolution occurred in oxalic/nitric acid mixtures within one week for two hematite sources and within three weeks for a third hematite sample with a larger average particle size. This dissolution rate appears acceptable for waste tank cleaning applications. (4) Stoichiometric dissolution of iron phases in oxalic acid (based on the oxalate concentration) and the formation of the preferred 1:1 Fe to oxalate complex

  19. Alternative Enhanced Chemical Cleaning Basic Studies Results FY09

    Energy Technology Data Exchange (ETDEWEB)

    Hay, M.; King, W.

    2010-05-05

    Due to the need to close waste storage tanks, chemical cleaning methods are needed for the effective removal of the heels. Oxalic acid is the preferred cleaning reagent for sludge heel dissolution, particularly for iron-based sludge, due to the strong complexing strength of the oxalate. However, the large quantity of oxalate added to the tank farm from oxalic acid based chemical cleaning has significant downstream impacts. Optimization of the oxalic acid cleaning process can potentially reduce the downstream impacts from chemical cleaning. To optimize oxalic acid usage, a detailed understanding of the chemistry of oxalic acid based sludge dissolution is required. Additionally, other acid systems may be required for specific waste components with low solubility in oxalic acid and as a means to reduce oxalic acid usage in general. Solubility tests were conducted using non-radioactive, pure metal phases known to be the primary phases present in High Level Waste sludge. The metal phases studied included the aluminum phases gibbsite and boehmite and the iron phases magnetite and hematite. Hematite and boehmite are expected to be the most difficult iron and aluminum phases to dissolve. These mineral phases have been identified in both SRS and Hanford High Level Waste sludge. Acids evaluated for dissolution included oxalic, nitric, and sulfuric acids. The results of the solubility tests indicate that oxalic and sulfuric acids are more effective for the dissolution of the primary sludge phases. For boehmite, elevated temperature will be required to promote effective phase dissolution in the acids studied. Literature reviews, thermodynamic modeling, and experimental results have all confirmed that pH control using a supplemental proton source (additional acid) is critical for minimization of oxalic acid usage during the dissolution of hematite. These results emphasize the importance of pH control in optimizing hematite dissolution in oxalic acid and may explain the somewhat

  20. Monitoring and Evaluation of Yearling Fall Chinook Salmon Released from Acclimation Facilities Upstream of Lower Granite Dam; 1998 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rocklage, Stephen J. (Nez Perce Tribe, Department of Fisheries Resource Management, Lapwai, ID)

    2004-01-01

    The Nez Perce Tribe, in cooperation with the U.S. Fish and Wildlife Service and Washington Department of Fish and Wildlife, conducted monitoring and evaluation studies on Lyons Ferry Hatchery (Snake River stock) yearling fall chinook salmon that were acclimated and released at three Fall Chinook Acclimation Project sites upstream of Lower Granite Dam along with yearlings released on-station from Lyons Ferry Hatchery in 1998. The three fall chinook acclimation facilities are operated by the Nez Perce Tribe and located at Pittsburg Landing and Captain John Rapids on the Snake River and at Big Canyon Creek on the Clearwater River. Yearlings at the Big Canyon facility consisted of two size classes that are referred to in this report as 9.5 fish per pound (fpp) and 30 fpp. The Big Canyon 9.5 fpp were comparable to the yearlings at Pittsburg Landing, Captain John Rapids and Lyons Ferry Hatchery. A total of 9,942 yearlings were PIT tagged and released at Pittsburg Landing. PIT tagged yearlings had a mean fork length of 159.9 mm and mean condition factor of 1.19. Of the 9,942 PIT tagged fish released, a total of 6,836 unique tags were detected at mainstem Snake and Columbia River dams (Lower Granite, Little Goose, Lower Monumental and McNary). A total of 4,926 9.5 fpp and 2,532 30 fpp yearlings were PIT tagged and released at Big Canyon. PIT tagged 9.5 fpp yearlings had a mean fork length of 156.9 mm and mean condition factor of 1.13. PIT tagged 30 fpp yearlings had a mean fork length of 113.1 mm and mean condition factor of 1.18. Of the 4,926 PIT tagged 9.5 fpp yearlings released, a total of 3,042 unique tags were detected at mainstem Snake and Columbia River dams. Of the 2,532 PIT tagged 30 fpp yearlings released, a total of 1,130 unique tags were detected at mainstem Snake and Columbia River dams. A total of 1,253 yearlings were PIT tagged and released at Captain John Rapids. PIT tagged yearlings had a mean fork length of 147.5 mm and mean condition factor of 1.09. Of

  1. Study on the Release of Grouper Epinephelus for Stock Enhancement

    Institute of Scientific and Technical Information of China (English)

    Bo Zhili; Zhou Wanxia

    2003-01-01

    Two methods, tagging and ink injection, are used in the grouper releasing experiment. The studied fishes are the juvenile of Epinephelus akaara and Epinephelus awoara both artificially cultivated and caught from natural waters, and their wild adults. Experimental results show that the inhabiting behaviours for both juvenile and adult fishes show distinct regionality, which move within an area of 2 n mile diameter 651 days and 48 days after being released, respectively. With the tagging method, the tagged fishes could only be recaptured in the year of release while, with the injection method, they could be caught in the lst, 2nd and 3rd years. It is confirmed that in the cement tank, the tagged fishes lose their 1/3 tags. That means that the tagging method is not fit for the release research while the injection method is. Generally, the recaptured rates of injected fishes are 1.4 ~ 4.5 %, 3.1 ~ 13.4 % and 2.7 % for the 1st, 2nd and 3rd years, respectively.

  2. Microwave Imaging of Human Forearms: Pilot Study and Image Enhancement

    Directory of Open Access Journals (Sweden)

    Colin Gilmore

    2013-01-01

    Full Text Available We present a pilot study using a microwave tomography system in which we image the forearms of 5 adult male and female volunteers between the ages of 30 and 48. Microwave scattering data were collected at 0.8 to 1.2 GHz with 24 transmitting and receiving antennas located in a matching fluid of deionized water and table salt. Inversion of the microwave data was performed with a balanced version of the multiplicative-regularized contrast source inversion algorithm formulated using the finite-element method (FEM-CSI. T1-weighted MRI images of each volunteer’s forearm were also collected in the same plane as the microwave scattering experiment. Initial “blind” imaging results from the utilized inversion algorithm show that the image quality is dependent on the thickness of the arm’s peripheral adipose tissue layer; thicker layers of adipose tissue lead to poorer overall image quality. Due to the exible nature of the FEM-CSI algorithm used, prior information can be readily incorporated into the microwave imaging inversion process. We show that by introducing prior information into the FEM-CSI algorithm the internal anatomical features of all the arms are resolved, significantly improving the images. The prior information was estimated manually from the blind inversions using an ad hoc procedure.

  3. Studies to Enhance Superconductivity in Thin Film Carbon

    Science.gov (United States)

    Pierce, Benjamin; Brunke, Lyle; Burke, Jack; Vier, David; Steckl, Andrew; Haugan, Timothy

    2012-02-01

    With research in the area of superconductivity growing, it is no surprise that new efforts are being made to induce superconductivity or increase transition temperatures (Tc) in carbon given its many allotropic forms. Promising results have been published for boron doping in diamond films, and phosphorus doping in highly oriented pyrolytic graphite (HOPG) films show hints of superconductivity.. Following these examples in the literature, we have begun studies to explore superconductivity in thin film carbon samples doped with different elements. Carbon thin films are prepared by pulsed laser deposition (PLD) on amorphous SiO2/Si and single-crystal substrates. Doping is achieved by depositing from (C1-xMx) single-targets with M = B4C and BN, and also by ion implantation into pure-carbon films. Previous research had indicated that Boron in HOPG did not elicit superconducting properties, but we aim to explore that also in thin film carbon and see if there needs to be a higher doping in the sample if trends were able to be seen in diamond films. Higher onset temperatures, Tc , and current densities, Jc, are hoped to be achieved with doping of the thin film carbon with different elements.

  4. Surface plasmon enhanced interfacial electron transfer and resonance Raman, surface-enhanced resonance Raman studies of cytochrome C mutants

    Energy Technology Data Exchange (ETDEWEB)

    Zheng, Junwei [Iowa State Univ., Ames, IA (United States)

    1999-11-08

    Surface plasmon resonance was utilized to enhance the electron transfer at silver/solution interfaces. Photoelectrochemical reductions of nitrite, nitrate, and CO2 were studied on electrochemically roughened silver electrode surfaces. The dependence of the photocurrent on photon energy, applied potential and concentration of nitrite demonstrates that the photoelectrochemical reduction proceeds via photoemission process followed by the capture of hydrated electrons. The excitation of plasmon resonances in nanosized metal structures resulted in the enhancement of the photoemission process. In the case of photoelectrocatalytic reduction of CO2, large photoelectrocatalytic effect for the reduction of CO2 was observed in the presence of surface adsorbed methylviologen, which functions as a mediator for the photoexcited electron transfer from silver metal to CO2 in solution. Photoinduced reduction of microperoxidase-11 adsorbed on roughened silver electrode was also observed and attributed to the direct photoejection of free electrons of silver metal. Surface plasmon assisted electron transfer at nanostructured silver particle surfaces was further determined by EPR method.

  5. Surface plasmon enhanced interfacial electron transfer and resonance Raman, surface-enhanced resonance Raman studies of cytochrome C mutants

    Energy Technology Data Exchange (ETDEWEB)

    Zheng, Junwei

    1999-11-08

    Surface plasmon resonance was utilized to enhance the electron transfer at silver/solution interfaces. Photoelectrochemical reductions of nitrite, nitrate, and CO{sub 2} were studied on electrochemically roughened silver electrode surfaces. The dependence of the photocurrent on photon energy, applied potential and concentration of nitrite demonstrates that the photoelectrochemical reduction proceeds via photoemission process followed by the capture of hydrated electrons. The excitation of plasmon resonances in nanosized metal structures resulted in the enhancement of the photoemission process. In the case of photoelectrocatalytic reduction of CO{sub 2}, large photoelectrocatalytic effect for the reduction of CO{sub 2} was observed in the presence of surface adsorbed methylviologen, which functions as a mediator for the photoexcited electron transfer from silver metal to CO{sub 2} in solution. Photoinduced reduction of microperoxidase-11 adsorbed on roughened silver electrode was also observed and attributed to the direct photoejection of free electrons of silver metal. Surface plasmon assisted electron transfer at nanostructured silver particle surfaces was further determined by EPR method.

  6. Response of ecosystem metabolism to low densities of spawning Chinook salmon

    Science.gov (United States)

    Benjamin, Joseph R.; Bellmore, James R.; Watson, Grace A.

    2016-01-01

    Marine derived nutrients delivered by large runs of returning salmon are thought to subsidize the in situ food resources that support juvenile salmon. In the Pacific Northwest, USA, salmon have declined to web. Understanding how recipient ecosystems respond to low levels of marine derived nutrients may inform nutrient augmentation studies aimed at enhancing fish populations.

  7. Effects of a Novel Acoustic Transmitter on Swimming Performance and Predator Avoidance of Juvenile Chinook Salmon: Determination of a Size Threshold

    Energy Technology Data Exchange (ETDEWEB)

    Walker, Ricardo W.; Ashton, Neil K.; Brown, Richard S.; Liss, Stephanie A.; Colotelo, Alison HA; Do Vale Beirao, Bernardo; Townsend, Richard L.; Deng, Zhiqun; Eppard, M. B.

    2016-01-04

    Abstract Telemetry studies are used worldwide to investigate the behavior and migration of fishes. The miniaturization of acoustic transmitters enables researchers to tag smaller fish, such as the juvenile life stages of salmon, thus representing a greater proportion of the population of interest. The development of an injectable acoustic transmitter has led to research determining the least invasive and quickest method of tag implantation. Swimming performance and predator avoidance were examined. To quantify critical swimming speed (Ucrit; an index of prolonged swimming performance) and predator avoidance for juvenile Chinook salmon (Oncorhynchus tshawytscha), fish were split into three groups: (1) fish implanted with a dummy injectable acoustic transmitter (IAT treatment), (2) fish implanted with a dummy injectable acoustic transmitter and passive integrated transponder (PIT) tag (IAT+PIT treatment), and (3) an untagged control group. The Ucrits and predator avoidance capability of tagged fish were compared with untagged fish to determine if carrying an IAT adversely affected swimming performance or predator avoidance. Fish implanted with only an IAT had lower Ucrit values than untagged fish and a size threshold at 79 mm fork length was found. Conversely, Ucrit values for fish implanted with an IAT+PIT were not significantly different from untagged controls and no size threshold was found. Predator avoidance testing showed no significant difference for fish implanted with an IAT compared to untagged individuals, nor was there a significant difference for IAT+PIT fish compared to untagged fish.

  8. A comparative study on preprocessing techniques in diabetic retinopathy retinal images: illumination correction and contrast enhancement.

    Science.gov (United States)

    Rasta, Seyed Hossein; Partovi, Mahsa Eisazadeh; Seyedarabi, Hadi; Javadzadeh, Alireza

    2015-01-01

    To investigate the effect of preprocessing techniques including contrast enhancement and illumination correction on retinal image quality, a comparative study was carried out. We studied and implemented a few illumination correction and contrast enhancement techniques on color retinal images to find out the best technique for optimum image enhancement. To compare and choose the best illumination correction technique we analyzed the corrected red and green components of color retinal images statistically and visually. The two contrast enhancement techniques were analyzed using a vessel segmentation algorithm by calculating the sensitivity and specificity. The statistical evaluation of the illumination correction techniques were carried out by calculating the coefficients of variation. The dividing method using the median filter to estimate background illumination showed the lowest Coefficients of variations in the red component. The quotient and homomorphic filtering methods after the dividing method presented good results based on their low Coefficients of variations. The contrast limited adaptive histogram equalization increased the sensitivity of the vessel segmentation algorithm up to 5% in the same amount of accuracy. The contrast limited adaptive histogram equalization technique has a higher sensitivity than the polynomial transformation operator as a contrast enhancement technique for vessel segmentation. Three techniques including the dividing method using the median filter to estimate background, quotient based and homomorphic filtering were found as the effective illumination correction techniques based on a statistical evaluation. Applying the local contrast enhancement technique, such as CLAHE, for fundus images presented good potentials in enhancing the vasculature segmentation.

  9. Enhancing Pre-Service Secondary Mathematics Teachers' Skills of Using the Geometer's Sketchpad through Lesson Study

    Science.gov (United States)

    Meng, Chew Cheng; Sam, Lim Chap

    2011-01-01

    The purpose of this study was to enhance pre-service secondary mathematics teachers' skills of using the Geometer's Sketchpad (GSP) through Lesson Study. Twenty-four Lesson Study groups each comprising four or five pre-service secondary mathematics teachers who attended a mathematics teaching methods course in a local public university were set up…

  10. Smallmouth bass and largemouth bass predation on juvenile Chinook salmon and other salmonids in the Lake Washington basin

    Science.gov (United States)

    Tabor, R.A.; Footen, B.A.; Fresh, K.L.; Celedonia, M.T.; Mejia, F.; Low, D.L.; Park, L.

    2007-01-01

    We assessed the impact of predation by smallmouth bass Micropterus dolomieu and largemouth bass M. salmoides on juveniles of federally listed Chinook salmon Oncorhynchus tshawytscha and other anadromous salmonid populations in the Lake Washington system. Bass were collected with boat electrofishing equipment in the south end of Lake Washington (February-June) and the Lake Washington Ship Canal (LWSC; April-July), a narrow waterway that smolts must migrate through to reach the marine environment. Genetic analysis was used to identify ingested salmonids to obtain a more precise species-specific consumption estimate. Overall, we examined the stomachs of 783 smallmouth bass and 310 largemouth bass greater than 100 mm fork length (FL). Rates of predation on salmonids in the south end of Lake Washington were generally low for both black bass species. In the LWSC, juvenile salmonids made up a substantial part of bass diets; consumption of salmonids was lower for largemouth bass than for smallmouth bass. Smallmouth bass predation on juvenile salmonids was greatest in June, when salmonids made up approximately 50% of their diet. In the LWSC, overall black bass consumption of salmonids was approximately 36,000 (bioenergetics model) to 46,000 (meal turnover consumption model) juveniles, of which about one-third was juvenile Chinook salmon, one-third was coho salmon O. kisutch, and one-third was sockeye salmon O. nerka. We estimated that about 2,460,000 juvenile Chinook salmon (hatchery and wild sources combined) were produced in the Lake Washington basin in 1999; thus, the mortality estimates in the LWSC range from 0.5% (bioenergetics) to 0.6% (meal turnover). Black bass prey mostly on subyearlings of each salmonid species. The vulnerability of subyearlings to predation can be attributed to their relatively small size; their tendency to migrate when water temperatures exceed 15??C, coinciding with greater black bass activity; and their use of nearshore areas, where overlap

  11. 2002 Evaluation of Chum, Chinook and Coho Salmon Entrapment near Ives Island in the Columbia River; 2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Duston, Reed A.; Wilson, Jeremy (Pacific States Marine Fisheries Commission, Vancouver, WA)

    2003-10-01

    From January to July of 2002, 79 entrapments and 22 stranding sites were examined on the Columbia River near Ives Island, downstream of Bonneville Dam. A total of 2,272 salmonids, consisting of three different species, were collected at these sites (Table 1). The fish sampled during this time were chinook salmon (49%), chum salmon (29%), and coho salmon (22%). The following analysis of the relationship between environmental factors and salmon placed at risk by river level fluctuations focuses on each of these three salmon species.

  12. 2004 Evaluation of Chum, Chinook and Coho Salmon Entrapment near Ives Island in the Columbia River; 2004 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Duston, Reed A.; Wilson, Jeremy (Pacific States Marine Fisheries Commission, Vancouver, WA)

    2005-08-01

    From January to July of 2004, 33 entrapments and 56 stranding sites were examined on the Columbia River near Ives Island, downstream of Bonneville Dam. A total of 7,834 salmonids, made up of three species, were collected (Table 1). The fish sampled during this time were chinook salmon (85%), chum salmon (8%), and coho salmon (7%). The following analysis of the relationship between environmental factors and salmon placed at risk by river level fluctuations focuses on each of these three species of salmon.

  13. 2003 Evaluation of Chum, Chinook and Coho Salmon Entrapment near Ives Island in the Columbia River; 2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Duston, Reed A.; Wilson, Jeremy (Pacific States Marine Fisheries Commission, Vancouver, WA)

    2004-09-01

    From January to July of 2003, 42 entrapments and 25 stranding sites were examined on the Columbia River near Ives Island, downstream of Bonneville Dam. A total of 6,122 salmonids, consisting of three different species, were collected at these sites (Table 1). The fish sampled during this time were chinook salmon (69%), chum salmon (7%), and coho salmon (24%). The following analysis of the relationship between environmental factors and salmon placed at risk by river level fluctuations focuses on each of these three salmon species.

  14. Alkyl polyglycoside/1-naphthol formulations. A case study of surfactant enhanced oil recovery

    Energy Technology Data Exchange (ETDEWEB)

    Iglauer, Stefan; Wu, Yongfu; Shuler, Patrick; Tang, Yongchun [California Institute of Technology, Covina, CA (United States). Div. of Chemistry and Chemical Engineering; Goddard, William A. III [California Institute of Technology, Pasadena, CA (United States). Div. of Chemistry and Chemical Engineering

    2011-03-15

    We present a case study of surfactant enhanced oil recovery using Alkyl polyglucoside/1-naphthol formulations. Alkyl polyglucosides are a green, non-toxic and renewable surfactant class synthesized out of agricultural raw materials. We measured interfacial tensions versus n-octane and viscosities of these formulations and conducted one coreflood enhanced oil recovery (EOR) experiment where we recovered 82.6 % of initial oil in place demonstrating that these formulations are efficient EOR agents. (orig.)

  15. Raman and surface-enhanced Raman scattering (SERS) studies of the thrombin-binding aptamer.

    Science.gov (United States)

    Wu, Tsai-Chin; Vasudev, Milana; Dutta, Mitra; Stroscio, Michael A

    2013-06-01

    Surface-enhanced Raman scattering is used to study the Raman spectra and peak shifts the thrombin-binding aptamer (TBA) on substrates having two different geometries; one with a single stranded sequence and one with double stranded sequence. The Raman signals of the deoxyribonucleic acids on both substrates are enhanced and specific peaks of bases are identified. These results are highly reproducible and have promising applications in low cost nucleic acid detection.

  16. Monitoring the Reproductive Success of Naturally Spawning Hatchery and Natural Spring Chinook Salmon in the Wenatchee River, 2008-2009 Progress Report.

    Energy Technology Data Exchange (ETDEWEB)

    Ford, Michael J.; Williamson, Kevin S. [Northwest Fisheries Science Center

    2009-05-28

    . To better understand this trend, redd microhabitat data was collected from spring Chinook salmon that spawned in the Chiwawa River and Nason Creek, the primary spawning tributaries in the Wenatchee Basin. The objective of the study was to examine the influence of habitat and spawner density on spawning site and redd structure characteristics. We analyzed 27 variables of redd microhabitat data collected from the upper and lower most reaches of each study stream. In both streams, we found redds in the upper most reaches to be significantly larger (length and width) and deeper (bowl depth). Spawner density was significantly greater in the lower Chiwawa River compared to the upper reach. No difference in spawner density was detected between reaches in Nason Creek (P = 0.54). Data should be considered preliminary until sample size goals are achieved.

  17. Changes in Habitat and Populations of Steelhead Trout, Coho Salmon, and Chinook Salmon in Fish Creek, Oregon; Habitat Improvement, 1983-1987 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Everest, Fred H. (Oregon State University, Pacific Northwest Forest and Range Experiment Station, Corvallis, OR); Hohler, David B.; Cain, Thomas C. (Mount Hood National Forest, Clackamas River Ranger District, Estacada, OR)

    1988-03-01

    Construction and evaluation of salmonid habitat improvements on Fish Creek, a tributary of the upper Clackamas River, began in 1982 as a cooperative venture between the Estacada Ranger District, Mt. Hood National Forest, and the Anadromous Fish Habitat Research Unit of the Pacific Northwest Research Station (PNW), USDA Forest Service. The project was initially conceived as a 5-year effort (1982-1987) to be financed with Forest Service funds. The habitat improvement program and the evaluation of improvements were both expanded in mid-1983 when the Bonneville Power Administration (BPA) entered into an agreement with the Mt. Hood National Forest to cooperatively fund work on Fish Creek. Habitat improvement work in the basin is guided by the Fish Creek Habitat Rehabilitation-Enhancement Framework developed cooperatively by the Estacada Ranger District, the Oregon Department of Fish and Wildlife, and the Pacific Northwest Research Station. The framework examines potential factors limiting production of salmonids in the basin, and the appropriate habitat improvement measures needed to address the limiting factors. Habitat improvement work in the basin has been designed to: (1) improve quantity, quality, and distribution of spawning habitat for coho and spring chinook salmon and steelhead trout, (2) increase low flow rearing habitat for steelhead trout and coho salmon, (3) improve overwintering habitat for coho salmon and steelhead trout, (4) rehabilitate riparian vegetation to improve stream shading to benefit all species, and (5) evaluate improvement projects from a drainage wide perspective. The objectives of the evaluation include: (1) Drainage-wide evaluation and quantification of changes in salmonid spawning and rearing habitat resulting from a variety of habitat improvements. (2) Evaluation and quantification of changes in fish populations and biomass resulting from habitat improvements. (3) Benefit-cost analysis of habitat improvements.

  18. Conceptual Spawning Habitat Model to Aid in ESA Recovery Plans for Snake River Fall Chinook Salmon, 2002-2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Geist, David (Pacific Northwest National Laboratory)

    2005-09-01

    The goal of this project is to develop a spawning habitat model that can be used to determine the physical habitat factors that are necessary to define the production potential for fall chinook salmon that spawn in large mainstem rivers like the Columbia River's Hanford Reach and Snake River. This project addresses RPA 155 in the NMFS 2000 Biological Opinion: Action 155: BPA, working with BOR, the Corps, EPA, and USGS, shall develop a program to: (1) Identify mainstem habitat sampling reaches, survey conditions, describe cause-and-effect relationships, and identify research needs; (2) Develop improvement plans for all mainstem reaches; and (3) Initiate improvements in three mainstem reaches. During FY 2003 we continued to collect and analyze information on fall chinook salmon spawning habitat characteristics in the Hanford Reach that will be used to address RPA 155, i.e., items 1-3 above. For example, in FY 2003: (1) We continued to survey spawning habitat in the Hanford Reach and develop a 2-dimensional hydraulic and habitat model that will be capable of predicting suitability of fall chinook salmon habitat in the Hanford Reach; (2) Monitor how hydro operations altered the physical and chemical characteristics of the river and the hyporheic zone within fall chinook salmon spawning areas in the Hanford Reach; (3) Published a paper on the impacts of the Columbia River hydroelectric system on main-stem habitats of fall chinook salmon (Dauble et al. 2003). This paper was made possible with data collected on this project; (4) Continued to analyze data collected in previous years that will ultimately be used to identify cause-and-effect relationships and identify research needs that will assist managers in the improvement of fall chinook habitat quality in main-stem reaches. During FY 2004 we plan to: (1) Complete preliminary reporting and submit papers based on the results of the project through FY 2004. Although we have proposed additional analysis of data be

  19. Effects of multiple acute stressors on the predator avoidance ability and physiology of juvenile Chinook salmon

    Science.gov (United States)

    Mesa, Matthew G.

    1994-01-01

    Northern squaw fish Ptychocheilus oregonensis are the predominant predators of juvenile Pacific salmonids Oncorhynchus spp. in the Columbia River, and their predation rates are greatest just below dams. Because juvenile salmonids are commonly subjected to multiple stressors at dams in the course of their seaward migration, high predation rates below dams may be due in part to an increase in the vulnerability of stressed fish. I conducted laboratory experiments to examine the predator avoidance ability and physiological stress responses of juvenile chinook salmon O. tshawytscha subjected to treatments (stressors) designed to simulate routine hatchery practices (multiple handlings) or dam passage (multiple agitations). Both stressors resulted in lethargic behavior in the fish, and agitation also caused disorieniation and occasional injury. When equal numbers of stressed and unstressed fish were exposed to northern squawfish for up to 1 h, significantly more stressed fish were eaten, but this effect was not evident during longer exposures. The lack of differential predation in trials lasting up to 24 h can be explained by the rapid development of schooling behavior in the prey, but other possibilities exist, such as changing ratios of stressed and unstressed prey over time. Concentrations of plasma cortisol, glucose, and lactate in fish subjected to multiple stressors were similar and sometimes cumulative, returned to prestress levels within 6-24 h, and correlated poorly with predator avoidance ability. My results suggest that juvenile salmonids are capable of avoiding predators within 1 h after being subjected to multiple acute stressors even though physiological homeostasis may be altered for up to 24 h. Therefore, because juvenile salmonids typically reside in lailrace areas for only a short time after dam passage, measures aimed at reducing physical stress or protecting them as they migrate through dam tailraces may help alleviate the relatively intense predation

  20. Cost-effective management alternatives for Snake river chinook salmon: A biological-economic synthesis

    Science.gov (United States)

    Halsing, D.L.; Moore, M.R.

    2008-01-01

    The mandate to increase endangered salmon populations in the Columbia River Basin of North America has created a complex, controversial resource-management issue. We constructed an integrated assessment model as a tool for analyzing biological-economic trade-offs in recovery of Snake River spring- and summer-run chinook salmon (Oncorhynchus tshawytscha). We merged 3 frameworks: a salmon-passage model to predict migration and survival of smolts; an age-structured matrix model to predict long-term population growth rates of salmon stocks; and a cost-effectiveness analysis to determine a set of least-cost management alternatives for achieving particular population growth rates. We assessed 6 individual salmon-management measures and 76 management alternatives composed of one or more measures. To reflect uncertainty, results were derived for different assumptions of effectiveness of smolt transport around dams. Removal of an estuarine predator, the Caspian Tern (Sterna caspia), was cost-effective and generally increased long-term population growth rates regardless of transport effectiveness. Elimination of adult salmon harvest had a similar effect over a range of its cost estimates. The specific management alternatives in the cost-effective set depended on assumptions about transport effectiveness. On the basis of recent estimates of smolt transport effectiveness, alternatives that discontinued transportation or breached dams were prevalent in the cost-effective set, whereas alternatives that maximized transportation dominated if transport effectiveness was relatively high. More generally, the analysis eliminated 80-90% of management alternatives from the cost-effective set. Application of our results to salmon management is limited by data availability and model assumptions, but these limitations can help guide research that addresses critical uncertainties and information. Our results thus demonstrate that linking biology and economics through integrated models can

  1. Monitoring the Migrations of Wild Snake River Spring/Summer Chinook Salmon Juveniles, 2007-2008

    Energy Technology Data Exchange (ETDEWEB)

    Achord, Stephen; Sandford, Benjamin P.; Hockersmith, Eric E. [Fish Ecology Division, Northwest Fisheries Science Center

    2009-07-09

    This report provides results from an ongoing project to monitor the migration behavior and survival of wild juvenile spring/summer Chinook salmon in the Snake River Basin. Data reported is from detections of PIT tagged fish during late summer 2007 through mid-2008. Fish were tagged in summer 2007 by the National Marine Fisheries Service (NMFS) in Idaho and by the Oregon Department of Fish and Wildlife (ODFW) in Oregon. Our analyses include migration behavior and estimated survival of fish at instream PIT-tag monitors and arrival timing and estimated survival to Lower Granite Dam. Principal results from tagging and interrogation during 2007-2008 are: (1) In July and August 2007, we PIT tagged and released 7,390 wild Chinook salmon parr in 12 Idaho streams or sample areas. (2) Overall observed mortality from collection, handling, tagging, and after a 24-hour holding period was 1.4%. (3) Of the 2,524 Chinook salmon parr PIT tagged and released in Valley Creek in summer 2007, 218 (8.6%) were detected at two instream PIT-tag monitoring systems in lower Valley Creek from late summer 2007 to the following spring 2008. Of these, 71.6% were detected in late summer/fall, 11.9% in winter, and 16.5% in spring. Estimated parr-to-smolt survival to Lower Granite Dam was 15.5% for the late summer/fall group, 48.0% for the winter group, and 58.5% for the spring group. Based on detections at downstream dams, the overall efficiency of VC1 (upper) or VC2 (lower) Valley Creek monitors for detecting these fish was 21.1%. Using this VC1 or VC2 efficiency, an estimated 40.8% of all summer-tagged parr survived to move out of Valley Creek, and their estimated survival from that point to Lower Granite Dam was 26.5%. Overall estimated parr-to-smolt survival for all summer-tagged parr from this stream at the dam was 12.1%. Development and improvement of instream PIT-tag monitoring systems continued throughout 2007 and 2008. (4) Testing of PIT-tag antennas in lower Big Creek during 2007

  2. Enhanced brain connectivity in math-gifted adolescents: An fMRI study using mental rotation.

    Science.gov (United States)

    Prescott, James; Gavrilescu, Maria; Cunnington, Ross; O'Boyle, Michael W; Egan, Gary F

    2010-12-01

    Mathematical giftedness is a form of intelligence related to enhanced mathematical reasoning that can be tested using a variety of numerical and spatial tasks. A number of neurobiological mechanisms related to exceptional mathematical reasoning ability have been postulated, including enhanced brain connectivity. We aimed to further investigate this possibility by comparing a group of mathematically gifted adolescents with an average math ability control group performing mental rotation of complex three-dimensional block figures. Functional magnetic resonance imaging (fMRI) data were collected and differences in intrahemispheric and interhemispheric connectivity between the groups were assessed using structural equation modeling (SEM). The math-gifted showed heightened intrahemispheric frontoparietal connectivity, as well as enhanced interhemispheric frontal connectivity between the dorsolateral prefrontal and premotor cortex. These enhanced connectivity patterns are consistent with previous studies linking increased activation of the frontal and parietal regions with high fluid intelligence, and may be a unique neural characteristic of the mathematically gifted brain.

  3. Comparative study of electrochromic enhancement of latent fingerprints with existing development techniques.

    Science.gov (United States)

    Beresford, Ann L; Brown, Rachel M; Hillman, A Robert; Bond, John W

    2012-01-01

    To address the challenge of capturing latent fingerprint evidence from metal surfaces, a new method of latent fingerprint enhancement based on electrochromic polymer films has recently been developed. Here, we present a study comparing the development and visualization of nonvisible fingerprints on stainless steel substrates using this electrochromic enhancement approach with three classical methods (dusting, wet powder, and cyanoacrylate fuming). Two variants of the electrochromic enhancement method were utilized with polyaniline and poly(3,4-ethylenedioxythiophene) as the electrochromic materials. Fingerprint samples were taken from different donors (varying in age and gender) and were exposed to different environments for systematically varied periods of time (up to 28 days). The environments represent plausible evidential scenarios: left under ambient conditions, washed with aqueous soap solution, washed with acetone, submerged in water, and maintained at elevated temperature. The electrochromic enhancement procedure frequently outperformed the traditional methods, particularly for samples exposed to more challenging histories.

  4. A Delphi Study on Technology Enhanced Learning (TEL) Applied on Computer Science (CS) Skills

    Science.gov (United States)

    Porta, Marcela; Mas-Machuca, Marta; Martinez-Costa, Carme; Maillet, Katherine

    2012-01-01

    Technology Enhanced Learning (TEL) is a new pedagogical domain aiming to study the usage of information and communication technologies to support teaching and learning. The following study investigated how this domain is used to increase technical skills in Computer Science (CS). A Delphi method was applied, using three-rounds of online survey…

  5. The Effects of Anchored Instruction for Teaching Social Studies: Enhancing Comprehension of Setting Information.

    Science.gov (United States)

    Vye, Nancy J.; And Others

    A study examined an experimental curriculum developed to enhance students' literacy and social studies skills. Videodisc and text materials (the films "Young Sherlock Holmes" and "Oliver" and stories by Charles Dickens and Conan Doyle) were used to create a "macrocontext" for learning. The curriculum evaluation…

  6. Outplanting Anadromous Salmonids, A Lilterature Study.

    Energy Technology Data Exchange (ETDEWEB)

    Smith, Eugene M.

    1985-10-01

    This paper presents a list of more than 200 references on topics associated with offstation releases of hatchery stocks of anadromous fish used to supplement or reestablish wild rearing. The narrative briefly reviews influences of genetics, rearing density of fish in the natural environment, survival rates observed from outplanted stocks, and estimation procedures for stocking rates and rearing densities. We have attempted to summarize guidelines and recommendations for fishery managers to consider. Based on tagging studies, a typical smolt release from a Willamette River hatchery would return 0.29% of the smolts to the stream of release as adults. Catch to escapement ratios for adult Willamette chinook vary widely between broods, but on average two fish are caught for each fish that escapes. The catch is about evenly divided between offshore and freshwater harvest. British Columbia is the primary location of offshore harvest, and the lower Willamette River is the primary location of freshwater harvest. Review of departmental policy indicates that only Willamette stock spring chinook are currently acceptable for use in a proposed outplant study within the Willamette basin. Further, most Oregon Department of Fish and Wildlife district management biologists would prefer not to transfer any stocks of spring chinook between drainage subbasins. State fishery managers identified 16 Willamette basin streams as being suitable for supplementation with spring chinook from hatcheries. We reviewed the potential for rearing salmon in reservoirs throughout the basin. Use of the Carmen-Smith spawning channel, which was constructed on the upper McKenzie River in 1960, has generally declined with the decline in populations of chinook salmon in this river. The Carmen-Smith channel still provides a spawning place for those relatively few adult chinook that still return each year, but more fishery benefits may result from other uses of this facility. 7 figs., 8 tabs.

  7. An operando surface enhanced Raman spectroscopy (SERS) study of carbon deposition on SOFC anodes.

    Science.gov (United States)

    Li, Xiaxi; Liu, Mingfei; Lee, Jung-pil; Ding, Dong; Bottomley, Lawrence A; Park, Soojin; Liu, Meilin

    2015-09-07

    Thermally robust and chemically inert Ag@SiO2 nanoprobes are employed to provide the surface enhanced Raman scattering (SERS) effect for an in situ/operando study of the early stage of carbon deposition on nickel-based solid oxide fuel cell (SOFC) anodes. The enhanced sensitivity to carbon enables the detection of different stages of coking, offering insights into intrinsic coking tolerance of material surfaces. Application of a thin coating of gadolinium doped ceria (GDC) enhances the resistance to coking of nickel surfaces. The electrochemically active Ni-YSZ interface appears to be more active for hydrocarbon reforming, resulting in the accumulation of different hydrocarbon molecules, which can be readily removed upon the application of an anodic current. Operando SERS is a powerful tool for the mechanistic study of coking in SOFC systems. It is also applicable to the study of other catalytic and electrochemical processes in a wide range of conditions.

  8. Assignment of Chinook salmon (Oncorhynchus tshawytscha) linkage groups to specific chromosomes reveals a karyotype with multiple rearrangements of the chromosome arms of rainbow trout (Oncorhynchus mykiss).

    Science.gov (United States)

    Phillips, Ruth B; Park, Linda K; Naish, Kerry A

    2013-12-09

    The Chinook salmon genetic linkage groups have been assigned to specific chromosomes using fluorescence in situ hybridization with bacterial artificial chromosome probes containing genetic markers mapped to each linkage group in Chinook salmon and rainbow trout. Comparison of the Chinook salmon chromosome map with that of rainbow trout provides strong evidence for conservation of large syntenic blocks in these species, corresponding to entire chromosome arms in the rainbow trout as expected. In almost every case, the markers were found at approximately the same location on the chromosome arm in each species, suggesting conservation of marker order on the chromosome arms of the two species in most cases. Although theoretically a few centric fissions could convert the karyotype of rainbow trout (2N = 58-64) into that of Chinook salmon (2N = 68) or vice versa, our data suggest that chromosome arms underwent multiple centric fissions and subsequent new centric fusions to form the current karyotypes. The morphology of only approximately one-third of the chromosome pairs have been conserved between the two species.

  9. Assessing the suitability of a partial water reuse system for rearing juvenile Chinook salmon Oncorhynchus tshawytscha for stocking in Washington State

    Science.gov (United States)

    Health and welfare of juvenile Chinook salmon Oncorhynchus tshawytsha reared in a pilot circular tank-based partial water reuse system in Washington State were evaluated in comparison to fish from the same spawn reared in a flow-through raceway, in order to assess the suitability of using water reus...

  10. Effects of acute thermal stress on the survival, predator avoidance, and physiology of juvenile fall Chinook salmon

    Science.gov (United States)

    Mesa, M.G.; Weiland, L.K.; Wagner, P.

    2002-01-01

    We subjected juvenile fall chinook salmon from the Hanford Reach of the Columbia River to acute thermal stressors in the laboratory that were derived from field data. We assessed the effects of thermal stress on: (1) the extent of direct mortality; (2) the vulnerability of fish to predation by smallmouth bass; and (3) some general physiological stress responses and synthesis of heat shock protein 70 (hsp70). Thermally-stressed fish showed little direct mortality and no increases in vulnerability to predation. However, these fish showed transient increases in plasma concentrations of cortisol, glucose, and lactate, and a dramatic (25-fold higher than controls) and persistent (lasting 2 wk) increase in levels of liver hsp70. Our results indicate that exposure of Hanford Reach juvenile fall chinook salmon to such stressors did not lead to significant increases in direct mortality or vulnerability to predation, but did alter physiological homeostasis, which should be of concern to those managing this resource. Because our fish received only a single exposure to one of the stressors we examined, we are also concerned about the consequences of exposing fish to multiple, cumulative stressors - a likely scenario for fish in the wild.

  11. Snake River fall Chinook salmon life history investigations, 1/1/2013 – 12/31/2013

    Science.gov (United States)

    Tiffan, Kenneth F.; Connor, William P.

    2015-01-01

    Smallmouth bass predation on subyearling fall Chinook salmon was examined in the upper portion of Lower Granite Reservoir during 2013. During the time subyearlings were present in the reservoir, smallmouth bass were collected, their stomach contents removed for diet analysis, and their abundance estimated with mark-recapture techniques. In 2013, the greatest consumption of subyearlings by smallmouth bass occurred in late May and early June—as much as 50% of their diet by weight. Sand rollers were the most common non-salmonid fish consumed by smallmouth bass. In the section of the reservoir above the confluence with the Clearwater River, the abundance of bass was higher in non-riprap habitat than in riprap, but the opposite was true in the section below the confluence. We estimated that over 168,000 subyearlings were lost to smallmouth bass predation in 2013. Given the predominance of sand rollers in the diet of smallmouth bass, we believe this species reduces predation on subyearling fall Chinook salmon. A complete report of our findings is provided in the Appendix.

  12. Monitoring the Migrations of Wild Snake River Spring/Summer Chinook Salmon Smolts, 2001-2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Achond, Stephen; Hockersmith, Eric E.; Sandford, Benjamin P. (National Marine Fisheries Service, Northwest Fisheries Science Center, Seattle, WA)

    2003-07-01

    This report details the 2002 results from an ongoing project to monitor the migration behavior of wild spring/summer chinook salmon smolts in the Snake River Basin. The report also discusses trends in the cumulative data collected for this project from Oregon and Idaho streams since 1989. The project was initiated after detection data from passive-integrated-transponder tags (PIT tags) had shown distinct differences in migration patterns between wild and hatchery fish for three consecutive years. National Marine Fisheries Service (NMFS) investigators first observed these differences in 1989. The data originated from tagging and interrogation operations begun in 1988 to evaluate smolt transportation for the U.S. Army Corps of Engineers. In 1991, the Bonneville Power Administration began a cooperative effort with NMFS to expand tagging and interrogation of wild fish. Project goals were to characterize the outmigration timing of these fish, to determine whether consistent migration patterns would emerge, and to investigate the influence of environmental factors on the timing and distribution of these migrations. In 1992, the Oregon Department of Fish and Wildlife (ODFW) began an independent program of PIT tagging wild chinook salmon parr in the Grande Ronde and Imnaha River Basins in northeast Oregon. Since then, ODFW has reported all tagging, detection, and timing information on fish from these streams. However, with ODFW concurrence, NMFS will continue to report arrival timing of these fish at Lower Granite Dam.

  13. Spectroscopic study of surface enhanced Raman scattering of caffeine on borohydride-reduced silver colloids

    Science.gov (United States)

    Chen, Xiaomin; Gu, Huaimin; Shen, Gaoshan; Dong, Xiao; Kang, Jian

    2010-06-01

    The surface enhanced Raman scattering (SERS) of caffeine on borohydride-reduced silver colloids system under different aqueous solution environment has been studied in this paper. The relative intensity of SERS of caffeine significantly varies with different concentrations of sodium chloride and silver particles. However, at too high or too low concentration of sodium chloride and silver particle, the enhancement of SERS spectra is not evident. The SERS spectra of caffeine suggest that the contribution of the charge transfer mechanism to SERS may be dominant. The chloride ions can significantly enhance the efficiency of SERS, while the enhancement is selective, as the efficiency in charge transfer enhancement is higher than in electromagnetic enhancement. Therefore, it can be concluded that the active site of chloride ion locates on the bond between the caffeine and the silver surface. In addition, the SERS spectra of caffeine on borohydride-reduced and citrate-reduced silver colloids are different, which may be due to different states caffeine adsorbed on silver surface under different silver colloids.

  14. Microbial enhanced oil recovery—a modeling study of the potential of spore-forming bacteria

    DEFF Research Database (Denmark)

    Nielsen, Sidsel Marie; Nesterov, Igor; Shapiro, Alexander

    2016-01-01

    Microbial enhanced oil recovery (MEOR) utilizes microbes for enhancing the recovery by several mechanisms, among which the most studied are the following: (1) reduction of oil-water interfacial tension (IFT) by the produced biosurfactant and (2) selective plugging by microbes and metabolic products...... is modification of the relative permeabilities by decreasing the interfacial tension. Attachment of bacteria reduces the pore space available for flow, i.e., the effective porosity and permeability. Clogging of specific areas may occur. An extensive study of the MEOR on the basis of the developed model has...

  15. Melting of nanoparticles-enhanced phase change material (NEPCM) in vertical semicircle enclosure: numerical study

    Energy Technology Data Exchange (ETDEWEB)

    Jourabian, Mahmoud [University of Trieste, Piazzale (Italy); Farhadi, Mousa [Babol Noshirvani University of Technology, Shariati Avenue (Iran, Islamic Republic of)

    2015-09-15

    Convection melting of ice as a Phase change material (PCM) dispersed with Cu nanoparticles, which is encapsulated in a semicircle enclosure is studied numerically. The enthalpy-based Lattice Boltzmann method (LBM) combined with a Double distribution function (DDF) model is used to solve the convection-diffusion equation. The increase in solid concentration of nanoparticles results in the enhancement of thermal conductivity of PCM and the decrease in the latent heat of fusion. By enhancing solid concentration of nanoparticles, the viscosity of nanofluid increases and convective heat transfer dwindles. For all Rayleigh numbers investigated in this study, the insertion of nanoparticles in PCM has no effect on the average Nusselt number.

  16. HEAD INJURY ASSESSMENT IN JUVENILE CHINOOK USING THE ALPHA II-SPECTRIN BIOMARKER: EFFECTS OF PRESSURE CHANGES AND PASSAGE THROUGH A REMOVABLE SPILLWAY WEIR

    Energy Technology Data Exchange (ETDEWEB)

    Jonason, C.; Miracle, A.

    2009-01-01

    The cytoskeletal protein alpha II-spectrin has specifi c neurodegenerative mechanisms that allow the necrotic (injury-induced) and apoptotic (non-injury-induced) pathways of proteolysis to be differentiated in an immunoblot. Consequently, αII-spectrin breakdown products (SBDPs) are potential biomarkers for diagnosing traumatic brain injury (TBI). The purpose of the following investigation, consisting of two studies, was to evaluate the utility of the spectrin biomarker in diagnosing TBI in fi sh that travel through hydroelectric dams in the Columbia and Snake Rivers. The fi rst study used hyperbaric pressure chambers to simulate the pressure changes that affect fi sh during passage through a Federal Columbia River Power System (FCRPS) Kaplan turbine. The second study tested the effect of a removable spillway weir (RSW) on the passage of juvenile chinook (Oncorhynchus tshawytscha). This study was conducted in tandem with a balloon-tag study by the U.S. Army Corps of Engineers. Brain samples from fi sh were collected and analyzed using an immunoblot for SBDPs, and imaging software was used to quantify the protein band density and determine the ratio of cleaved protein to total protein. The biomarker analyses found higher SBDP expression levels in fi sh that were exposed to lower pressure nadirs and fi sh that passed through the RSW at a deep orientation. In general, the incidence of injuries observed after treatment positively correlated with expression levels, suggesting that the biomarker method of analysis is comparable to traditional methods of injury assessment. It was also found that, for some treatments, the 110 kDa spectrin fragment (SBDP 110) correlated more strongly with necrotic head injury incidence and mortality rates than did the total cleaved protein or the 120 kDa fragment. These studies will be informative in future decisions regarding the design of turbines and fi sh passage structures in hydroelectric dams and will hopefully contribute to the

  17. Emigration of Natural and Hatchery Chinook Salmon and Steelhead Smolts from the Imnaha River, Oregon, October 20, 1999 to June 15, 2000 : 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Cleary, Peter J.

    2002-12-01

    This report details the smolt performance of natural and hatchery chinook salmon and steelhead from the Imnaha River to the Snake River and Columbia River dams during migration year 2000. Flow conditions in the Imnaha River and Snake River were appreciably lower during May and June in 2000, compared to historic levels at gauging stations, but flow conditions in the Imnaha and Snake River were above average during April. Overall, water conditions for the entire Columbia River were characterized by the Fish Passage Center as below normal levels. Spill occurred continuously at Lower Granite Dam (LGR), Little Goose Dam (LGO), and Lower Monumental Dam (LMO) from April 5, April 10, and April 4, respectively, to June 20, and encompassed the periods of migration of Imnaha River juvenile chinook salmon and steelhead, with a few exceptions. Outflow in the tailraces of LGR, LGO, and LMO decreased in May and June while temperatures increased. Chinook salmon and steelhead were captured using rotary screw traps at river kilometer (rkm) 74 and 7 during the fall from October 20 to November 24, 1999, and during the spring period from February 26 to June 15, 2000, at rkm 7. Spring trapping information was reported weekly to the Fish Passage Center's Smolt Monitoring Program. A portion of these fish were tagged weekly with passive integrated transponder (PIT) tags and were detected migrating past interrogation sites at Snake River and Columbia River dams. Survival of PIT tagged fish was estimated with the Survival Using Proportional Hazards model (SURPH model). Estimated survival of fall tagged natural chinook (with {+-} 95% confidence intervals in parenthesis) from the upper Imnaha (rkm 74) to LGR was 29.6% ({+-} 2.8 ). Natural chinook salmon tagged in the fall in the lower Imnaha River at rkm 7, which over wintered in the Snake River, had an estimated survival of 36.8% ({+-} 2.9%) to LGR. Spring tagged natural chinook salmon from the lower site had an estimated survival of 84

  18. Image enhancement based on in vivo hyperspectral gastroscopic images: a case study

    Science.gov (United States)

    Gu, Xiaozhou; Han, Zhimin; Yao, Liqing; Zhong, Yunshi; Shi, Qiang; Fu, Ye; Liu, Changsheng; Wang, Xiguang; Xie, Tianyu

    2016-10-01

    Hyperspectral imaging (HSI) has been recognized as a powerful tool for noninvasive disease detection in the gastrointestinal field. However, most of the studies on HSI in this field have involved ex vivo biopsies or resected tissues. We proposed an image enhancement method based on in vivo hyperspectral gastroscopic images. First, we developed a flexible gastroscopy system capable of obtaining in vivo hyperspectral images of different types of stomach disease mucosa. Then, depending on a specific object, an appropriate band selection algorithm based on dependence of information was employed to determine a subset of spectral bands that would yield useful spatial information. Finally, these bands were assigned to be the color components of an enhanced image of the object. A gastric ulcer case study demonstrated that our method yields higher color tone contrast, which enhanced the displays of the gastric ulcer regions, and that it will be valuable in clinical applications.

  19. Mass Transfer Limited Enhanced Bioremediation at Dnapl Source Zones: a Numerical Study

    Science.gov (United States)

    Kokkinaki, A.; Sleep, B. E.

    2011-12-01

    The success of enhanced bioremediation of dense non-aqueous phase liquids (DNAPLs) relies on accelerating contaminant mass transfer from the organic to the aqueous phase, thus enhancing the depletion of DNAPL source zones compared to natural dissolution. This is achieved by promoting biological activity that reduces the contaminant's aqueous phase concentration. Although laboratory studies have demonstrated that high reaction rates are attainable by specialized microbial cultures in DNAPL source zones, field applications of the technology report lower reaction rates and prolonged remediation times. One possible explanation for this phenomenon is that the reaction rates are limited by the rate at which the contaminant partitions from the DNAPL to the aqueous phase. In such cases, slow mass transfer to the aqueous phase reduces the bioavailability of the contaminant and consequently decreases the potential source zone depletion enhancement. In this work, the effect of rate limited mass transfer on bio-enhanced dissolution of DNAPL chlorinated ethenes is investigated through a numerical study. A multi-phase, multi-component groundwater transport model is employed to simulate DNAPL mass depletion for a range of source zone scenarios. Rate limited mass transfer is modeled by a linear driving force model, employing a thermodynamic approach for the calculation of the DNAPL - water interfacial area. Metabolic reductive dechlorination is modeled by Monod kinetics, considering microbial growth and self-inhibition. The model was utilized to identify conditions in which mass transfer, rather than reaction, is the limiting process, as indicated by the bioavailability number. In such cases, reaction is slower than expected, and further increase in the reaction rate does not enhance mass depletion. Mass transfer rate limitations were shown to affect both dechlorination and microbial growth kinetics. The complex dynamics between mass transfer, DNAPL transport and distribution, and

  20. A mixed methods study of foreign language teachers implementing technology-enhanced multimedia instructio

    Directory of Open Access Journals (Sweden)

    Olha Ketsman

    2014-08-01

    Full Text Available Technology-enhanced multimedia instruction offers benefits for foreign language learners. Despite having much potential, technology itself is neither effective or nor effective, but teachers play a key role in determining its effectiveness because they are in charge of making instructional decisions and choose whether and how to use technology. This article fills a gap in the literature by reporting findings of a mixed methods study of technology- enhanced multimedia instruction in middle and high school foreign language classrooms. Convergent parallel mixed methods design was applied in this study and data was collected through quantitative survey and qualitative semi-structured interviews with teachers. Results from the study indicated a significant positive correlation between variables that contribute to the use of technology-enhanced multimedia instruction in foreign language classrooms and described effective technology-enhanced multimedia practices. The findings of the study have implications for teachers, administrators and faculty of teacher preparation programs as well as state teacher education policy makers.

  1. The Use of Enhanced Guided Notes in an Electric Circuit Class: An Exploratory Study

    Science.gov (United States)

    Lawanto, O.

    2012-01-01

    This study was conducted to evaluate students' (n=70) learning performance after their participation in lectures using enhanced guided notes (EGN) in an electric circuits course for non-electrical engineering students. Unlike traditional guided notes, EGN include questions that prompt students to evaluate their metacognitive knowledge. The results…

  2. Cognitive Enhancement Therapy for Adults with Autism Spectrum Disorder: Results of an 18-Month Feasibility Study

    Science.gov (United States)

    Eack, Shaun M.; Greenwald, Deborah P.; Hogarty, Susan S.; Bahorik, Amber L.; Litschge, Maralee Y.; Mazefsky, Carla A.; Minshew, Nancy J.

    2013-01-01

    Adults with autism experience significant impairments in social and non-social information processing for which few treatments have been developed. This study conducted an 18-month uncontrolled trial of Cognitive Enhancement Therapy (CET), a comprehensive cognitive rehabilitation intervention, in 14 verbal adults with autism spectrum disorder to…

  3. Enhancing engagement with a digital intervention using email and text message prompts: a usability study

    Directory of Open Access Journals (Sweden)

    Ghadah ALKHALDI

    2015-10-01

    Findings will inform health behaviour researchers and DI providers about the optimal content of prompt that can lead to enhanced engagement with DIs. Findings will also be used to test the effectiveness of different prompt content and delivery mode on engagement in a randomised controlled study.

  4. Enhancing Literacy in the Second Grade: Five Related Studies Using the Register Music/Reading Curriculum

    Science.gov (United States)

    Darrow, Alice-Ann; Cassidy, Jane W.; Flowers, Patricia J.; Register, Dena; Sims, Wendy; Standley, Jayne M.; Menard, Elizabeth; Swedberg, Olivia

    2009-01-01

    The purpose of these five related studies was to ascertain the effects of a music curriculum designed to enhance reading skills of second-grade students. The dependent variables were subtest scores on the Gates-MacGinitie Reading Test administered pre and post the music/reading intervention. Results showed that the total test gain scores of…

  5. Using Facebook to Enhance Independent Student Engagement: A Case Study of First-Year Undergraduates

    Science.gov (United States)

    Clements, Jeff C.

    2015-01-01

    A case study was conducted to assess the efficacy of online communication tools for enhancing independent student engagement in a first-year undergraduate class. Material relevant to course topics was shared with students through three communication platforms and data were extracted to measure student engagement. A questionnaire was also used to…

  6. Teachers as Participatory Designers: Two Case Studies with Technology-Enhanced Learning Environments

    Science.gov (United States)

    Cober, Rebecca; Tan, Esther; Slotta, Jim; So, Hyo-Jeong; Könings, Karen D.

    2015-01-01

    Teachers are not typically involved as participatory designers in the design of technology-enhanced learning environments. As they have unique and valuable perspectives on the role of technology in education, it is of utmost importance to engage them in a participatory design process. Adopting a case study methodology, we aim to reveal in what…

  7. Adsorption of vapreotide on gold colloids studied by surface enhanced Raman spectroscopy

    Science.gov (United States)

    Gómez, J. A.; Cabanzo, R.; Mejia Ospino, E.

    2016-02-01

    Surface Enhanced Raman Spectroscopy (SERS) has been used to investigate the somatostatin (SST) analogue Vapreotide (VAP) in gold colloids. The optimum conditions to detect SERS signals of VAP have been studied. The observed SERS bands correspond to different vibrational modes of the peptide; being the most dominant SERS signals the ones derived from the aromatic amino acids Tryptophan (Trp), Phenylalanine (Phe) and Tyrosine (Tyr). Changes in enhancement and wavenumber of the proper bands upon adsorption on gold colloid are consistent with VAP adsorption, primarily through Tryptophan residues.

  8. Assessments to determine the effect of current and alternate ladder operations on brood stock collection and behavior of hatchery fall Chinook Salmon at Spring Creek National Fish Hatchery during 2003-2005

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Spring Creek National Fish Hatchery traditionally operates an adult ladder, without closure, from the start of the tule fall Chinook salmon run in late August until...

  9. Assessments to determine the effect of current and alternate ladder operations on brood stock collection and behavior of hatchery fall Chinook Salmon at Little White Salmon National Fish Hatchery during 2004-05

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Production of upriver bright fall Chinook salmon at Little White Salmon National Fish Hatchery was introduced as part of the John Day Dam mitigation program in the...

  10. Oceanographic profile data collected aboard Chinook and Locator as part of project OPR-K977-FU-08 in the Gulf of Mexico from 2008-08-16 to 2008-10-16 (NCEI Accession 0130764)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0130764 includes physical and profile data collected aboard the Chinook and Locator during project OPR-K977-FU-08 in the Gulf of Mexico from...

  11. OBJECTIVE QUALITY ASSESSMENT OF IMAGE ENHANCEMENT METHODS IN DIGITAL MAMMOGRAPHY-A COMPARATIVE STUDY

    Directory of Open Access Journals (Sweden)

    Sheba K.U

    2016-08-01

    Full Text Available Mammography is the primary and most reliable technique for detection of breast cancer. Mammograms are examined for the presence of malignant masses and indirect signs of malignancy such as micro calcifications, architectural distortion and bilateral asymmetry. However, Mammograms are X-ray images taken with low radiation dosage which results in low contrast, noisy images. Also, malignancies in dense breast are difficult to detect due to opaque uniform background in mammograms. Hence, techniques for improving visual screening of mammograms are essential. Image enhancement techniques are used to improve the visual quality of the images. This paper presents the comparative study of different preprocessing techniques used for enhancement of mammograms in mini-MIAS data base. Performance of the image enhancement techniques is evaluated using objective image quality assessment techniques. They include simple statistical error metrics like PSNR and human visual system (HVS feature based metrics such as SSIM, NCC, UIQI, and Discrete Entropy

  12. Enhanced oral absorption of insulin-loaded liposomes containing bile salts: a mechanistic study.

    Science.gov (United States)

    Niu, Mengmeng; Tan, Ya'nan; Guan, Peipei; Hovgaard, Lars; Lu, Yi; Qi, Jianping; Lian, Ruyue; Li, Xiaoyang; Wu, Wei

    2014-01-01

    Liposomes containing bile salts (BS-liposomes) significantly enhanced the oral bioavailability of insulin (rhINS). However, the underlying absorption mechanisms have not been well understood yet. In this study, the transiting fate of the liposomes was first investigated using fluorescent imaging tools to confirm the effect of enhanced gastrointestinal stability. In order to obtain evidence of enhanced transcellular permeation, the interaction between BS-liposomes and the biomembrane was investigated in Caco-2 cell lines. BS-liposomes were found to be more stable in the gastrointestinal tract by showing prolonged residence time in comparison with conventional liposomes. BS-liposomes were significantly more effective for cellular uptake and transport of rhINS; and this effect was found to be size- and concentration-dependent. A good linear correlation was observed between the concentration of the liposomes and uptake/transport of rhINS. Confocal laser scanning microscopy visualization further validated the transcellular transit of BS-liposomes. The BS-liposomes showed little effect on cytotoxicity and did not induce apoptosis within 24h investigation. It was concluded that BS-liposomes showed improved in vivo residence time and enhanced permeation across the biomemebranes. Mechanisms of trans-enterocytic internalization could be proposed as an interpretation for enhanced absorption of insulin-loaded liposomes.

  13. A Study of explicit and implicit Enhancement on L2 Vocabulary Acquisition in Senor High School

    Institute of Scientific and Technical Information of China (English)

    郭晓云

    2015-01-01

    Vocabulary plays a prominent role in the second language acquisition of high school students. The new Curriculum Standard requires that students should master as many as 3300 words as well as 400-500 useful expressions and fixed collocation, which brings a great challenge to our vocabulary teaching in high schools. The present study aims at investigating differential effects of explicit and implicit enhancement on L2 vocabulary acquisition in senor high school in order to help teachers realize how to select and apply the most suitable way to the vocabulary instruction so as to improve students’ efficiency in the vocabulary retention.Based on the theory of depth of information processing by Craik and Lockhart (1972), the thesis mainly deals with 3 main aspects just as follows:First,the different effects of explicit enhancement and implicit enhancement on high school students’ vocabulary acquisition. Second, the different effects of explicit enhancement and implicit enhancement on the receptive vocabulary knowledge and productive knowledge.Third,the different effects on vocabulary retention, especially in short-term memory and long-term memory.

  14. A study of colloid-enhanced ultrafiltration. Final report, March 1984--December 1993

    Energy Technology Data Exchange (ETDEWEB)

    Scamehorn, J.F.; Christian, S.D.

    1994-02-01

    Over the past nine years of funding by DOE Office of Basic Energy Sciences, the authors have developed a whole family of methods under the umbrella of colloid-enhanced ultrafiltration techniques. These methods can be used for removal of either dissolved organics or multivalent ions from water or both simultaneously. They have gone from very fundamental studies of the ultrafiltration process to a field test using actual polluted groundwater. The orientation of this research has been the ultimate development of a workable, economical process. To do this, the authors have tried to understand the underlying fundamental phenomena involved in the separation and in potential solutions to technological bottlenecks and developed new scientific knowledge in the process. However, the thrust of the investigations have been focused on bringing the technology to a successful adoption by industry. This report summarizes the following: micellar-enhanced ultrafiltration; polyelectrolyte-enhanced ultrafiltration; ion-expulsion ultrafiltration; ligand-modified micellar-enhanced ultrafiltration; polyelectrolyte/surfactant-enhanced ultrafiltration, supporting research, and relation to energy. 61 refs.

  15. Investigations of Bull Trout (Salvelinus Confluentus), Steelhead Trout (Oncorhynchus Mykiss), and Spring Chinook Salmon (O. Tshawytscha) Interactions in Southeast Washington Streams : 1991 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Martin, Steven W.

    1992-07-01

    Bull trout (Salvelinus confluentus) are native to many tributaries of the Snake River in southeast Washington. The Washington Department of Wildlife (WDW) and the American Fisheries Society (AFS) have identified bull trout as a species of special concern which means that they may become threatened or endangered by relatively, minor disturbances to their habitat. Steelhead trout/rainbow trout (Oncorhynchus mykiss) and spring chinook salmon (O.tshawytscha) are also native to several tributaries of the Snake river in southeast Washington. These species of migratory fishes are depressed, partially due to the construction of several dams on the lower Snake river. In response to decreased run size, large hatchery program were initiated to produce juvenile steelhead and salmon to supplement repressed tributary stocks, a practice known as supplementation. There is a concern that supplementing streams with artificially high numbers of steelhead and salmon may have an impact on resident bull trout in these streams. Historically, these three species of fish existed together in large numbers, however, the amount of high-quality habitat necessary for reproduction and rearing has been severely reduced in recent years, as compared to historic amounts. The findings of the first year of a two year study aimed at identifying species interactions in southeast Washington streams are presented in this report. Data was collected to assess population dynamics; habitat utilization and preference, feeding habits, fish movement and migration, age, condition, growth, and the spawning requirements of bull trout in each of four streams. A comparison of the indices was then made between the study streams to determine if bull trout differ in the presence of the putative competitor species. Bull trout populations were highest in the Tucannon River (supplemented stream), followed by Mill Creek (unsupplemented stream). Young of the year bull trout utilized riffle and cascade habitat the most in all

  16. Post-Release Performance of Natural and Hatchery Subyearling Fall Chinook Salmon in the Snake and Clearwater Rivers.

    Energy Technology Data Exchange (ETDEWEB)

    Connor, William P.

    2008-04-01

    In 2006, we continued a multi-year study to compare smolt-to-adult return rate (SAR) ratios between two groups of Snake River Basin fall Chinook salmon Oncorhynchus tshawytscha that reached the sea through a combination of either (1) transportation and inriver migration or (2) bypass and inriver migration. We captured natural subyearlings rearing along the Snake and Clearwater rivers and implanted them with passive integrated transponder (PIT) tags, but knew in advance that sample sizes of natural fish would not be large enough for precise comparisons of SAR ratios. To increase sample sizes, we also cultured Lyons Ferry Hatchery subyearlings under a surrogate rearing strategy, implanted them with PIT tags, and released them into the Snake and Clearwater rivers to migrate seaward. The surrogate rearing strategy involved slowing growth at Dworshak National Fish Hatchery to match natural subyearlings in size at release as closely as possible, while insuring that all of the surrogate subyearlings were large enough for tagging (i.e., 60-mm fork length). Surrogate subyearlings were released from late May to early July 2006 to coincide with the historical period of peak beach seine catch of natural parr in the Snake and Clearwater rivers. We also PIT tagged a large representative sample of hatchery subyearlings reared under a production rearing strategy and released them into the Snake and Clearwater rivers in 2006 as part of new research on dam passage experiences (i.e., transported from a dam, dam passage via bypass, dam passage via turbine intakes or spillways). The production rearing strategy involved accelerating growth at Lyons Ferry Hatchery, sometimes followed by a few weeks of acclimation at sites along the Snake and Clearwater rivers before release from May to June. Releasing production subyearlings has been suggested as a possible alternative for making inferences on the natural population if surrogate fish were not available. Smoltto-adult return rates are not

  17. Retrospective cohort study of an enhanced recovery programme in oesophageal and gastric cancer surgery.

    Science.gov (United States)

    Gatenby, P A C; Shaw, C; Hine, C; Scholtes, S; Koutra, M; Andrew, H; Hacking, M; Allum, W H

    2015-10-01

    Introduction Enhanced recovery programmes have been established in some areas of elective surgery. This study applied enhanced recovery principles to elective oesophageal and gastric cancer surgery. Methods An enhanced recovery programme for patients undergoing open oesophagogastrectomy, total and subtotal gastrectomy for oesophageal and gastric malignancy was designed. A retrospective cohort study compared length of stay on the critical care unit (CCU), total length of inpatient stay, rates of complications and in-hospital mortality prior to (35 patients) and following (27 patients) implementation. Results In the cohort study, the median total length of stay was reduced by 3 days following oesophagogastrectomy and total gastrectomy. The median length of stay on the CCU remained the same for all patients. The rates of complications and mortality were the same. Conclusions The standardised protocol reduced the median overall length of stay but did not reduce CCU stay. Enhanced recovery principles can be applied to patients undergoing major oesophagogastrectomy and total gastrectomy as long as they have minimal or reversible co-morbidity.

  18. Video game training enhances cognition of older adults: a meta-analytic study.

    Science.gov (United States)

    Toril, Pilar; Reales, José M; Ballesteros, Soledad

    2014-09-01

    It has been suggested that video game training enhances cognitive functions in young and older adults. However, effects across studies are mixed. We conducted a meta-analysis to examine the hypothesis that training healthy older adults with video games enhances their cognitive functioning. The studies included in the meta-analysis were video game training interventions with pre- and posttraining measures. Twenty experimental studies published between 1986 and 2013, involving 474 trained and 439 healthy older controls, met the inclusion criteria. The results indicate that video game training produces positive effects on several cognitive functions, including reaction time (RT), attention, memory, and global cognition. The heterogeneity test did not show a significant heterogeneity (I(2) = 20.69%) but this did not preclude a further examination of moderator variables. The magnitude of this effect was moderated by methodological and personal factors, including the age of the trainees and the duration of the intervention. The findings suggest that cognitive and neural plasticity is maintained to a certain extent in old age. Training older adults with video games enhances several aspects of cognition and might be a valuable intervention for cognitive enhancement.

  19. A study on the enhancement of the international environment for nuclear Rand D in Korea

    Energy Technology Data Exchange (ETDEWEB)

    Choi, Young Myung; Lee, K. S.; Oh, B. Y.; Lee, H. S.; Yang, M. H.; Kim, H. J.; Song, K. D

    1999-08-01

    The objectives of this study are to identify international environmental factors which could hamper the successful implementation of national nuclear R and D programs and to derive measures of enhancing international nuclear environments confident for Korea's nuclear program to resolve or mitigate possible constraints due to those international factors. To accomplish these objectives, first, this study identifies national needs in the energy field and then in the nuclear field. Second, this study identifies international environmental factors which could hamper the successful implementation of national nuclear R and D programs. Third, this study suggests goals, strategies and measures of enhancing international nuclear environments confident for Korea's nuclear program to resolve possible constraints due to those international factors. (author)

  20. Synthesis of carbon nanotubes by plasma-enhanced CVD process: gas phase study of synthesis conditions

    OpenAIRE

    Guláš, Michal; Cojocaru, Costel Sorin; Fleaca, Claudiu; Farhat, Samir; Veis, Pavel; Le Normand, Francois

    2008-01-01

    International audience; To support experimental investigations, a model based on ChemkinTM software was used to simulate gas phase and surface chemistry during plasma-enhanced catalytic CVD of carbon nanotubes. According to these calculations, gas phase composition, etching process and growth rates are calculated. The role of several carbon species, hydrocarbon molecules and ions in the growth mechanism of carbon nanotubes is presented in this study. Study of different conditions of gas phase ...

  1. Synthesis of carbon nanbotubes by plasma-enhanced CVD process: gas phase study of synthesis conditions

    Science.gov (United States)

    Guláš, M.; Cojocaru, C. S.; Fleaca, C. T.; Farhat, S.; Veis, P.; Le Normand, F.

    2008-09-01

    To support experimental investigations, a model based on Chemkin^TM software was used to simulate gas phase and surface chemistry during plasma-enhanced catalytic CVD of carbon nanotubes. According to these calculations, gas phase composition, etching process and growth rates are calculated. The role of several carbon species, hydrocarbon molecules and ions in the growth mechanism of carbon nanotubes is presented in this study. Study of different conditions of gas phase activation sources and pressure is performed.

  2. Profile of microflora of the posterior intestine of Chinook salmon before, during, and after administration of rations with and without erythromycin

    Science.gov (United States)

    Moffitt, C.M.; Mobin, S.M.A.

    2006-01-01

    We describe the resident heterotrophic aerobic microflora of the salmonid posterior intestine before, during, and after the administration of rations with erythromycin in a hatchery raceway environment. We compare the profiles of medicated Chinook salmon Oncorhynchus tshawytscha with those of control fish that were not fed erythromycin. The combined counts of bacteria and yeasts per gram of fish intestine originating from four upstream raceways ranged from 3.0 ?? 102 to 9.6 ?? 105 colony-forming units (CFU) over the study period. Yeasts were commonly identified in the gut, and abundances ranged from 0% to more than 80% of the CFU. Erythromycin therapy decreased the total microbial population and altered the bacterial diversity in the gut during treatment. The intestinal microbial populations in fish medicated with erythromycin increased rapidly after treatment ceased, and by 25 d after treatment the CFU were similar in samples from both medicated and control fish populations. Of 325 isolates from fish selected for biochemical profiles, we identified a total of eight gram-positive and eight gram-negative genera. Bacillus spp. were common throughout sampling and were identified in samples of fish feed. Erythromycin-resistant, gram-positive bacteria were observed throughout the sampling in medicated and control fish. We identified seven gram-positive and two gram-negative genera in 74 selected isolates from control and erythromycin feeds. Our studies suggest that the aerobic microflora of the posterior intestine varies over time, and it is likely that few resistant genera of concern to human health are present.

  3. Grande Ronde Basin Spring Chinook Salmon Captive Broodstock Program, 2008 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hoffnagle, Timothy L.; Hair, Donald; Gee, Sally

    2009-03-31

    The Grande Ronde Basin Spring Chinook Salmon Captive Broodstock Program is designed to rapidly increase numbers of Chinook salmon in stocks that are in imminent danger of extirpation in Catherine Creek (CC), Lostine River (LR) and upper Grande Ronde River (GR). Natural parr are captured and reared to adulthood in captivity, spawned (within stocks) and their progeny reared to smoltification before being released into the natal stream of their parents. This program is co-managed by ODFW, National Marine Fisheries Service, Nez Perce Tribe and Confederated Tribes of the Umatilla Indian Reservation. Presmolt rearing was initially conducted at Lookingglass Fish Hatchery (LFH) but parr collected in 2003 and later were reared at Wallowa Fish Hatchery (WFH). Post-smolt rearing is conducted at Bonneville Fish Hatchery (BOH - freshwater) and at Manchester Research Station (MRS - saltwater). The CC and LR programs are being terminated, as these populations have achieved the goal of a consistent return of 150 naturally spawning adults, so the 2005 brood year was the last brood year collected for theses populations. The Grande Ronde River program continued with 300 fish collected each year. Currently, we are attempting to collect 150 natural parr and incorporate 150 parr collected as eggs from females with low ELISA levels from the upper Grande Ronde River Conventional Hatchery Program. This is part of a comparison of two methods of obtaining fish for a captive broodstock program: natural fish vs. those spawned in captivity. In August 2007, we collected 152 parr (BY 2006) from the upper Grande Ronde River and also have 155 Grande Ronde River parr (BY 2006) that were hatched from eyed eggs at LFH. During 2008, we were unable to collect natural parr from the upper Grande Ronde River. Therefore, we obtained 300 fish from low ELISA females from the upper Grande Ronde River Conventional Program. In October 2008 we obtained 170 eyed eggs from the upper Grande Ronde river Conventional

  4. Grande Ronde Basin Spring Chinook Salmon Captive Broodstock Program, 2008 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hoffnagle, Timothy L.; Hair, Donald; Gee, Sally

    2009-03-31

    The Grande Ronde Basin Spring Chinook Salmon Captive Broodstock Program is designed to rapidly increase numbers of Chinook salmon in stocks that are in imminent danger of extirpation in Catherine Creek (CC), Lostine River (LR) and upper Grande Ronde River (GR). Natural parr are captured and reared to adulthood in captivity, spawned (within stocks) and their progeny reared to smoltification before being released into the natal stream of their parents. This program is co-managed by ODFW, National Marine Fisheries Service, Nez Perce Tribe and Confederated Tribes of the Umatilla Indian Reservation. Presmolt rearing was initially conducted at Lookingglass Fish Hatchery (LFH) but parr collected in 2003 and later were reared at Wallowa Fish Hatchery (WFH). Post-smolt rearing is conducted at Bonneville Fish Hatchery (BOH - freshwater) and at Manchester Research Station (MRS - saltwater). The CC and LR programs are being terminated, as these populations have achieved the goal of a consistent return of 150 naturally spawning adults, so the 2005 brood year was the last brood year collected for theses populations. The Grande Ronde River program continued with 300 fish collected each year. Currently, we are attempting to collect 150 natural parr and incorporate 150 parr collected as eggs from females with low ELISA levels from the upper Grande Ronde River Conventional Hatchery Program. This is part of a comparison of two methods of obtaining fish for a captive broodstock program: natural fish vs. those spawned in captivity. In August 2007, we collected 152 parr (BY 2006) from the upper Grande Ronde River and also have 155 Grande Ronde River parr (BY 2006) that were hatched from eyed eggs at LFH. During 2008, we were unable to collect natural parr from the upper Grande Ronde River. Therefore, we obtained 300 fish from low ELISA females from the upper Grande Ronde River Conventional Program. In October 2008 we obtained 170 eyed eggs from the upper Grande Ronde river Conventional

  5. Enhancing Teachers' Technological Knowledge and Assessment Practices to Enhance Student Learning in Technology: A Two-year Classroom Study

    Science.gov (United States)

    Moreland, Judy; Jones, Alister; Northover, Ann

    2001-02-01

    This paper reports on a two-year classroom investigation of primary school (Years 1-8) technology education. The first year of the project explored emerging classroom practices in technology. In the second year intervention strategies were developed to enhance teaching, learning and assessment practices. Findings from the first year revealed that assessment was often seen in terms of social and managerial aspects, such as teamwork, turn taking and co-operative skills, rather than procedural and conceptual technological aspects. Existing formative interactions with students distorted the learning away from the procedural and conceptual aspects of the subject. The second year explored the development of teachers' technological knowledge in order to enhance formative assessment practices in technology, to inform classroom practice in technology, and to enhance student learning. Intervention strategies were designed to enhance the development of procedural, conceptual, societal and technical aspects of technology for teachers and students. The results from this intervention were very positive. This paper highlights the importance of developing teacher expertise pertaining to broad concepts of technology, detailed concepts in different technological areas and general pedagogical knowledge. The findings from this research therefore have implications for thinking about teaching, learning and assessment in technology.

  6. Investigations into the Early Life-history of Naturally Produced Spring Chinook Salmon and Summer Steelhead in the Grande Ronde River Basin, Annual Report 2001.

    Energy Technology Data Exchange (ETDEWEB)

    Reischauer, Alyssa; Monzyk, Frederick; Van Dyke, Erick

    2003-06-01

    We determined migration timing and abundance of juvenile spring chinook salmon Oncorhynchus tshawytscha and juvenile steelhead/rainbow trout Oncorhynchus mykiss using rotary screw traps on four streams in the Grande Ronde River basin during the 2001 migratory year (MY 2001) from 1 July 2000 through 30 June 2001. Based on migration timing and abundance, two distinct life-history strategies of juvenile spring chinook and O. mykiss could be distinguished. An 'early' migrant group left upper rearing areas from 1 July 2000 through 29 January 2001 with a peak in the fall. A 'late' migrant group descended from upper rearing areas from 30 January 2001 through 30 June 2001 with a peak in the spring. The migrant population of juvenile spring chinook salmon in the upper Grande Ronde River in MY 2001 was very low in comparison to previous migratory years. We estimated 51 juvenile spring chinook migrated out of upper rearing areas with approximately 12% of the migrant population leaving as early migrants to overwinter downstream. In the same migratory year, we estimated 16,067 O. mykiss migrants left upper rearing areas with approximately 4% of these fish descending the upper Grande Ronde River as early migrants. At the Catherine Creek trap, we estimated 21,937 juvenile spring chinook migrants in MY 2001. Of these migrants, 87% left upper rearing areas early to overwinter downstream. We also estimated 20,586 O. mykiss migrants in Catherine Creek with 44% leaving upper rearing areas early to overwinter downstream. At the Lostine River trap, we estimated 13,610 juvenile spring chinook migrated out of upper rearing areas with approximately 77% migrating early. We estimated 16,690 O. mykiss migrated out of the Lostine River with approximately 46% descending the river as early migrants. At the Minam River trap, we estimated 28,209 juvenile spring chinook migrated out of the river with 36% migrating early. During the same period, we estimated 28,113 O. mykiss with

  7. Critical thinking instruction and technology enhanced learning from the student perspective: A mixed methods research study.

    Science.gov (United States)

    Swart, Ruth

    2017-03-01

    Critical thinking is acclaimed as a valuable asset for graduates from higher education programs. Technology has advanced in quantity and quality; recognized as a requirement of 21st century learners. A mixed methods research study was undertaken, examining undergraduate nursing student engagement with critical thinking instruction, platformed on two technology-enhanced learning environments: a classroom response system face-to-face in-class and an online discussion forum out-of-class. The Community of Inquiry framed the study capturing constructivist collaborative inquiry to support learning, and facilitate critical thinking capability. Inclusion of quantitative and qualitative data sources aimed to gather a comprehensive understanding of students' development of critical thinking and engagement with technology-enhanced learning. The findings from the students' perspectives were positive toward the inclusion of technology-enhanced learning, and use in supporting their development of critical thinking. Students considered the use of two forms of technology beneficial in meeting different needs and preferences, offering varied means to actively participate in learning. They valued critical thinking instruction being intentionally aligned with subject-specific content facilitating understanding, application, and relevance of course material. While the findings are limited to student participants, the instructional strategies and technology-enhanced learning identified as beneficial can inform course design for the development of critical thinking.

  8. Contractors’ Attitude towards Enhancing Safety Performance: Case Study on Construction Firms in Penang

    Directory of Open Access Journals (Sweden)

    Ulang N. Md

    2014-01-01

    Full Text Available A qualitative study was conducted to investigate the contractors’ attitude towards enhancing the safety performance in construction site. Despite the fact that there are many safety initiatives established by the government, the rates of accidents are still in a critically high condition. Thus the purpose of this research is to study the contractors’ attitude towards enhancing the implementation of safety management system in construction site in order to increase the safety awareness of construction practitioners in construction site and improve the safety condition of construction sites. This study is conducted through oral interviews with the construction practitioners, and visual inspection of construction sites. The attitudes of contractors are evaluated from 3 aspects: Contractors’ efforts in implement and enforce the safety rules, Contractors efforts in overcoming the rate of accidents, and Reasons given by the contractors for not implement safety law.

  9. An enhanced Bayesian fingerprinting framework for studying sediment source dynamics in intensively managed landscapes

    Science.gov (United States)

    Abban, B.; (Thanos) Papanicolaou, A. N.; Cowles, M. K.; Wilson, C. G.; Abaci, O.; Wacha, K.; Schilling, K.; Schnoebelen, D.

    2016-06-01

    An enhanced revision of the Fox and Papanicolaou (hereafter referred to as "F-P") (2008a) Bayesian, Markov Chain Monte Carlo fingerprinting framework for estimating sediment source contributions and their associated uncertainties is presented. The F-P framework included two key deterministic parameters, α and β, that, respectively, reflected the spatial origin attributes of sources and the time history of eroded material delivered to and collected at the watershed outlet. However, the deterministic treatment of α and β is limited to cases with well-defined spatial partitioning of sources, high sediment delivery, and relatively short travel times with little variability in transport within the watershed. For event-based studies in intensively managed landscapes, this may be inadequate since landscape heterogeneity results in variabilities in source contributions, their pathways, delivery times, and storage within the watershed. Thus, probabilistic treatments of α and β are implemented in the enhanced framework to account for these variabilities. To evaluate the effects of the treatments of α and β on source partitioning, both frameworks are applied to the South Amana Subwatershed (SASW) in the U.S. midwest. The enhanced framework is found to estimate mean source contributions that are in good agreement with estimates from other studies in SASW. The enhanced framework is also able to produce expected trends in uncertainty during the study period, unlike the F-P framework, which does not perform as expected. Overall, the enhanced framework is found to be less sensitive to changes in α and β than the F-P framework, and, therefore, is more robust and desirable from a management standpoint.

  10. Effect of dactyloscopic powders on DNA profiling from enhanced fingerprints: results from an experimental study.

    Science.gov (United States)

    Tozzo, Pamela; Giuliodori, Alice; Rodriguez, Daniele; Caenazzo, Luciana

    2014-03-01

    We conducted a study on the effect of fingerprint enhancement methods on subsequent short tandem repeat profiling. First, we performed a study typing blood traces deposited on 5 different surfaces, treated with 8 types of dactyloscopic powders. Three different DNA extraction methods were used. Subsequently, we analyzed latent fingerprints on the same 5 surfaces enhanced with the 8 different powders used in the first part of the study. This study has demonstrated that DNA profiling can be performed on fingerprints left on different substrates, and the substrate will affect the amount of DNA that can be recovered for DNA typing. In the first phase of the study, a profile was obtained in 92% of the 120 samples analyzed; in the second part, in 55% of the 80 samples analyzed, we obtained a profile complete in 32.5% of the cases. From the results obtained, it seems that the powders used in latent fingerprints enhancement, rather than having a direct inhibitory effect on extraction and amplification of DNA, may cause partial degradation of DNA, reducing the efficiency of amplification reaction. It should not be forgotten that these results were obtained under laboratory conditions, and in real caseworks, there may still be different problems involved.

  11. Monte Carlo study of radiation dose enhancement by gadolinium in megavoltage and high dose rate radiotherapy.

    Directory of Open Access Journals (Sweden)

    Daniel G Zhang

    Full Text Available MRI is often used in tumor localization for radiotherapy treatment planning, with gadolinium (Gd-containing materials often introduced as a contrast agent. Motexafin gadolinium is a novel radiosensitizer currently being studied in clinical trials. The nanoparticle technologies can target tumors with high concentration of high-Z materials. This Monte Carlo study is the first detailed quantitative investigation of high-Z material Gd-induced dose enhancement in megavoltage external beam photon therapy. BEAMnrc, a radiotherapy Monte Carlo simulation package, was used to calculate dose enhancement as a function of Gd concentration. Published phase space files for the TrueBeam flattening filter free (FFF and conventional flattened 6MV photon beams were used. High dose rate (HDR brachytherapy with Ir-192 source was also investigated as a reference. The energy spectra difference caused a dose enhancement difference between the two beams. Since the Ir-192 photons have lower energy yet, the photoelectric effect in the presence of Gd leads to even higher dose enhancement in HDR. At depth of 1.8 cm, the percent mean dose enhancement for the FFF beam was 0.38±0.12, 1.39±0.21, 2.51±0.34, 3.59±0.26, and 4.59±0.34 for Gd concentrations of 1, 5, 10, 15, and 20 mg/mL, respectively. The corresponding values for the flattened beam were 0.09±0.14, 0.50±0.28, 1.19±0.29, 1.68±0.39, and 2.34±0.24. For Ir-192 with direct contact, the enhanced were 0.50±0.14, 2.79±0.17, 5.49±0.12, 8.19±0.14, and 10.80±0.13. Gd-containing materials used in MRI as contrast agents can also potentially serve as radiosensitizers in radiotherapy. This study demonstrates that Gd can be used to enhance radiation dose in target volumes not only in HDR brachytherapy, but also in 6 MV FFF external beam radiotherapy, but higher than the currently used clinical concentration (>5 mg/mL would be needed.

  12. Monte Carlo study of radiation dose enhancement by gadolinium in megavoltage and high dose rate radiotherapy.

    Science.gov (United States)

    Zhang, Daniel G; Feygelman, Vladimir; Moros, Eduardo G; Latifi, Kujtim; Zhang, Geoffrey G

    2014-01-01

    MRI is often used in tumor localization for radiotherapy treatment planning, with gadolinium (Gd)-containing materials often introduced as a contrast agent. Motexafin gadolinium is a novel radiosensitizer currently being studied in clinical trials. The nanoparticle technologies can target tumors with high concentration of high-Z materials. This Monte Carlo study is the first detailed quantitative investigation of high-Z material Gd-induced dose enhancement in megavoltage external beam photon therapy. BEAMnrc, a radiotherapy Monte Carlo simulation package, was used to calculate dose enhancement as a function of Gd concentration. Published phase space files for the TrueBeam flattening filter free (FFF) and conventional flattened 6MV photon beams were used. High dose rate (HDR) brachytherapy with Ir-192 source was also investigated as a reference. The energy spectra difference caused a dose enhancement difference between the two beams. Since the Ir-192 photons have lower energy yet, the photoelectric effect in the presence of Gd leads to even higher dose enhancement in HDR. At depth of 1.8 cm, the percent mean dose enhancement for the FFF beam was 0.38±0.12, 1.39±0.21, 2.51±0.34, 3.59±0.26, and 4.59±0.34 for Gd concentrations of 1, 5, 10, 15, and 20 mg/mL, respectively. The corresponding values for the flattened beam were 0.09±0.14, 0.50±0.28, 1.19±0.29, 1.68±0.39, and 2.34±0.24. For Ir-192 with direct contact, the enhanced were 0.50±0.14, 2.79±0.17, 5.49±0.12, 8.19±0.14, and 10.80±0.13. Gd-containing materials used in MRI as contrast agents can also potentially serve as radiosensitizers in radiotherapy. This study demonstrates that Gd can be used to enhance radiation dose in target volumes not only in HDR brachytherapy, but also in 6 MV FFF external beam radiotherapy, but higher than the currently used clinical concentration (>5 mg/mL) would be needed.

  13. Integrating subsistence practice and species distribution modeling: assessing invasive elodea’s potential impact on Native Alaskan subsistence of Chinook salmon and whitefish

    Science.gov (United States)

    Luizza, Matthew; Evangelista, Paul; Jarnevich, Catherine S.; West, Amanda; Stewart, Heather

    2016-01-01

    Alaska has one of the most rapidly changing climates on earth and is experiencing an accelerated rate of human disturbance, including resource extraction and transportation infrastructure development. Combined, these factors increase the state’s vulnerability to biological invasion, which can have acute negative impacts on ecological integrity and subsistence practices. Of growing concern is the spread of Alaska’s first documented freshwater aquatic invasive plant Elodea spp. (elodea). In this study, we modeled the suitable habitat of elodea using global and state-specific species occurrence records and environmental variables, in concert with an ensemble of model algorithms. Furthermore, we sought to incorporate local subsistence concerns by using Native Alaskan knowledge and available statewide subsistence harvest data to assess the potential threat posed by elodea to Chinook salmon (Oncorhynchus tshawytscha) and whitefish (Coregonus nelsonii) subsistence. State models were applied to future climate (2040–2059) using five general circulation models best suited for Alaska. Model evaluations indicated that our results had moderate to strong predictability, with area under the receiver-operating characteristic curve values above 0.80 and classification accuracies ranging from 66 to 89 %. State models provided a more robust assessment of elodea habitat suitability. These ensembles revealed different levels of management concern statewide, based on the interaction of fish subsistence patterns, known spawning and rearing sites, and elodea habitat suitability, thus highlighting regions with additional need for targeted monitoring. Our results suggest that this approach can hold great utility for invasion risk assessments and better facilitate the inclusion of local stakeholder concerns in conservation planning and management.

  14. Integrating subsistence practice and species distribution modeling: assessing invasive elodea's potential impact on Native Alaskan subsistence of Chinook salmon and whitefish

    Science.gov (United States)

    Luizza, Matthew W.; Evangelista, Paul H.; Jarnevich, Catherine S.; West, Amanda; Stewart, Heather

    2016-07-01

    Alaska has one of the most rapidly changing climates on earth and is experiencing an accelerated rate of human disturbance, including resource extraction and transportation infrastructure development. Combined, these factors increase the state's vulnerability to biological invasion, which can have acute negative impacts on ecological integrity and subsistence practices. Of growing concern is the spread of Alaska's first documented freshwater aquatic invasive plant Elodea spp. (elodea). In this study, we modeled the suitable habitat of elodea using global and state-specific species occurrence records and environmental variables, in concert with an ensemble of model algorithms. Furthermore, we sought to incorporate local subsistence concerns by using Native Alaskan knowledge and available statewide subsistence harvest data to assess the potential threat posed by elodea to Chinook salmon ( Oncorhynchus tshawytscha) and whitefish ( Coregonus nelsonii) subsistence. State models were applied to future climate (2040-2059) using five general circulation models best suited for Alaska. Model evaluations indicated that our results had moderate to strong predictability, with area under the receiver-operating characteristic curve values above 0.80 and classification accuracies ranging from 66 to 89 %. State models provided a more robust assessment of elodea habitat suitability. These ensembles revealed different levels of management concern statewide, based on the interaction of fish subsistence patterns, known spawning and rearing sites, and elodea habitat suitability, thus highlighting regions with additional need for targeted monitoring. Our results suggest that this approach can hold great utility for invasion risk assessments and better facilitate the inclusion of local stakeholder concerns in conservation planning and management.

  15. Copper, cadmium, and zinc concentrations in juvenile Chinook salmon and selected fish-forage organisms (aquatic insects) in the upper Sacramento River, California

    Science.gov (United States)

    Saiki, Michael K.; Martin, Barbara A.; Thompson, Larry D.; Walsh, Daniel

    2001-01-01

    This study assessed the downstream extent andseverity of copper (Cu), cadmium (Cd), and zinc (Zn)contamination from acid mine drainage on juvenile chinook salmon(Oncorhynchus tshawytscha) and aquatic insects over aroughly 270-km reach of the Sacramento River below KeswickReservoir. During April–May 1998, salmon were collected fromfour sites in the river and from a fish hatchery that receiveswater from Battle Creek. Salmon from river sites were examinedfor gut contents to document their consumption of variousinvertebrate taxa, whereas salmon from river sites and thehatchery were used for metal determinations. Midge(Chironomidae) and caddisfly (Trichoptera) larvae and mayfly(Ephemeroptera) nymphs were collected for metal determinationsduring April–June from river sites and from Battle and Buttecreeks. The fish hatchery and Battle and Butte creeks served asreference sites because they had no history of receiving minedrainage. Salmon consumed mostly midge larvae and pupae (44.0%,damp-dry biomass), caddisfly larvae (18.9%), Cladocera (5.8%),and mayfly nymphs (5.7%). These results demonstrated thatinsects selected for metal determinations were important as fishforage. Dry-weight concentrations of Cu, Cd, and Zn weregenerally far higher in salmon and insects from the river thanfrom reference sites. Within the river, high metalconcentrations persisted as far downstream as South Meridian (thelowermost sampling site). Maximum concentrations of Cd (30.7 μg g-1) and Zn (1230 μg g-1),but not Cu (87.4 μg g-1), in insects exceeded amounts that other investigators reported as toxic when fed for prolonged periods to juvenile salmonids.

  16. Comparing the Reproductive Success of Yakima River Hatchery- and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Schroder, Steven L. (Washington Department of Fish and Wildlife, Olympia, WA); Knudsen, Curtis M. (Oncorh Consulting, Olympia, WA); Watson, Bruce D. (Yakima Nation, Toppenish, WA)

    2003-05-01

    4 and 5. In addition, male reproductive success was more than twice as variable as that seen in females. Some males apparently never spawned and others produced more than 7,000 offspring an amount that was more than double the quantity generated by the most successful female. Behavioral observations showed that a number of factors besides male origin influenced their reproductive success. One was relative body size; larger males tended to dominate smaller opponents and therefore had greater access to females. However, male dominance was not always related to relative size. The ability to attack and chase opponents was, however, positively related to reproductive success. We also discovered that the reproductive status of females and the social status of males were often reflected by their nuptial coloration. Territorial females typically had a single broad purple black stripe, light green or brown backs and white or gray ventral surfaces. Dominate males on the other hand, were generally a uniform dark brown or black color. The percentage of time that a male possessed a dark color pattern was positively linked to his reproductive success, as was the percentage of time he was observed courting or defending a female. The number of times a male was chased or attacked by a female also affected his reproductive success, in this situation the greater the frequency of such attacks the lower the reproductive success of the male. The pedigree analyses also disclosed that both hatchery and wild precocious males were able to fertilize eggs and produce offspring under natural spawning conditions. In conclusion we found differences in the reproductive competency of hatchery- and wild origin spring chinook. Wild females were better at depositing their eggs and having those eggs produce fry. In one study group wild males were more successful at producing offspring than hatchery males. Additional replications of such evaluations are being carried out to determine if the differences

  17. Monitoring the Migrations of Wild Snake River Spring/Summer Chinook Salmon Smolts, 2000-2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Achord, Stephen; Axel, Gordon A.; Hockersmith, Eric E.

    2002-07-01

    This report details the 2001 results from an ongoing project to monitor the migration behavior of wild spring/summer chinook salmon smolts in the Snake River Basin. The report also discusses trends in the cumulative data collected for this project from Oregon and Idaho streams since 1989. The project was initiated after detection data from passive-integrated-transponder tags (PIT tags) had shown distinct differences in migration patterns between wild and hatchery fish for three consecutive years. National Marine Fisheries Service (NMFS) investigators first observed these data in 1989. The data originated from tagging and interrogation operations begun in 1988 to evaluate smolt transportation for the U.S. Army Corps of Engineers.

  18. Comparing the Reproductive Success of Yakima River Hatchery- and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Schroder, S.L.; Pearsons, T.N. (Washington Department of Fish and Wildlife, Olympia, WA); Knudsen, C.M. (Oncorh Consulting, Olympia, WA)

    2005-05-01

    A growing body of literature suggests that adult salmon produced by artificial culture are not as reproductively successful as wild fish when they spawn under natural conditions. Behavioral, morphological, and physiological divergences have been observed between hatchery and wild fish. These disparities are the likely proximate causes of the differences seen in the reproductive success of hatchery and wild salmonids. Two evolutionary paradigms have been proposed to explain why salmonids cultured in hatcheries are genetically and phenotypically different from wild cohorts. The first proposes that natural selection has been significantly relaxed in hatcheries. Consequently, fish that normally would have perished because of the possession of unsuitable traits are able to survive. If these traits have a genetic basis, they may become established in a hatchery population and cause its productivity to be less than expected if the fish are once again exposed to natural selection pressures. The second theorizes that environmental and social conditions in hatcheries are less variable than in the natural environment and that these conditions will remain relatively constant from one generation to the next. In this circumstance, selection for genetic traits that adapt fish to artificial culture will become prevalent in the population. Such traits may be mal-adaptive under natural conditions. Many of the studies that have compared the reproductive success (RS) of hatchery and wild fish, however, have used non-local hatchery fish that have experienced multiple generations of hatchery culture. Few efforts have been made where both the hatchery and wild fish have originated from the same population. When such studies have been performed differences in the competency of the fish to produce offspring have not been detected or are not as great as those expressed when non-local hatchery fish have been used. The hatchery spring Chinook produced by the Yakima Fisheries Project

  19. Measuring the effect of enhanced cleaning in a UK hospital: a prospective cross-over study

    Directory of Open Access Journals (Sweden)

    Dancer Stephanie J

    2009-06-01

    Full Text Available Abstract Background Increasing hospital-acquired infections have generated much attention over the last decade. There is evidence that hygienic cleaning has a role in the control of hospital-acquired infections. This study aimed to evaluate the potential impact of one additional cleaner by using microbiological standards based on aerobic colony counts and the presence of Staphylococcus aureus including meticillin-resistant S. aureus. Methods We introduced an additional cleaner into two matched wards from Monday to Friday, with each ward receiving enhanced cleaning for six months in a cross-over design. Ten hand-touch sites on both wards were screened weekly using standardised methods and patients were monitored for meticillin-resistant S. aureus infection throughout the year-long study. Patient and environmental meticillin-resistant S. aureus isolates were characterised using molecular methods in order to investigate temporal and clonal relationships. Results Enhanced cleaning was associated with a 32.5% reduction in levels of microbial contamination at hand-touch sites when wards received enhanced cleaning (P S. aureus/S. aureus than sites further from the patient (P = 0.065. Genotyping identified indistinguishable strains from both hand-touch sites and patients. There was a 26.6% reduction in new meticillin-resistant S. aureus infections on the wards receiving extra cleaning, despite higher meticillin-resistant S. aureus patient-days and bed occupancy rates during enhanced cleaning periods (P = 0.032: 95% CI 7.7%, 92.3%. Adjusting for meticillin-resistant S. aureus patient-days and based upon nine new meticillin-resistant S. aureus infections seen during routine cleaning, we expected 13 new infections during enhanced cleaning periods rather than the four that actually occurred. Clusters of new meticillin-resistant S. aureus infections were identified 2 to 4 weeks after the cleaner left both wards. Enhanced cleaning saved the hospital £30

  20. Effects of dam removal on Tule Fall Chinook salmon spawning habitat in the White Salmon River, Washington

    Science.gov (United States)

    Hatten, James R.; Batt, Thomas R.; Skalicky, Joseph J.; Engle, Rod; Barton, Gary J.; Fosness, Ryan L.; Warren, Joe

    2016-01-01

    Condit Dam is one of the largest hydroelectric dams ever removed in the USA. Breached in a single explosive event in October 2011, hundreds-of-thousands of cubic metres of sediment washed down the White Salmon River onto spawning grounds of a threatened species, Columbia River tule fall Chinook salmon Oncorhynchus tshawytscha. We investigated over a 3-year period (2010–2012) how dam breaching affected channel morphology, river hydraulics, sediment composition and tule fall Chinook salmon (hereafter ‘tule salmon’) spawning habitat in the lower 1.7 km of the White Salmon River (project area). As expected, dam breaching dramatically affected channel morphology and spawning habitat due to a large load of sediment released from Northwestern Lake. Forty-two per cent of the project area that was previously covered in water was converted into islands or new shoreline, while a large pool near the mouth filled with sediments and a delta formed at the mouth. A two-dimensional hydrodynamic model revealed that pool area decreased 68.7% in the project area, while glides and riffles increased 659% and 530%, respectively. A spatially explicit habitat model found the mean probability of spawning habitat increased 46.2% after dam breaching due to an increase in glides and riffles. Shifting channels and bank instability continue to negatively affect some spawning habitat as sediments continue to wash downstream from former Northwestern Lake, but 300 m of new spawning habitat (river kilometre 0.6 to 0.9) that formed immediately post-breach has persisted into 2015. Less than 10% of tule salmon have spawned upstream of the former dam site to date, but the run sizes appear healthy and stable. Published 2015. This article is a U.S. Government work and is in the public domain in the USA.

  1. Mortality and kidney histopathology of Chinook salmon Oncorhynchus tshawytscha exposed to virulent and attenuated Renibacterium salmoninarum strains

    Science.gov (United States)

    O'Farrell, Caroline L.; Elliott, Diane G.; Landolt, Marsha L.

    2001-01-01

    An isolate of Renibacterium salmoninarum (strain MT 239) exhibiting reduced virulence in rainbow trout Oncorhynchus mykiss was tested for its ability to cause bacterial kidney disease (BKD) in chinook salmon Oncorhynchus tshawytscha, a salmonid species more susceptible to BKD. Juvenile chinook salmon were exposed to either 33209, the American Type Culture Collection type strain of R. salmoninarum, or to MT 239, by an intraperitoneal injection of 1 x 10(3) or 1 x 10(6) bacteria fish(-1), or by a 24 h immersion in 1 x 10(5) or 1 x 10(7) bacteria ml(-1). For 22 wk fish were held in 12 degrees C water and monitored for mortality. Fish were sampled periodically for histological examination of kidney tissues. In contrast to fish exposed to the high dose of strain 33209 by either injection or immersion, none of the fish exposed to strain MT 239 by either route exhibited gross clinical signs or histopathological changes indicative of BKD. However, the MT 239 strain was detected by the direct fluorescent antibody technique in 4 fish that died up to 11 wk after the injection challenge and in 5 fish that died up to 20 wk after the immersion challenge. Viable MT 239 was isolated in culture from 3 fish that died up to 13 wk after the immersion challenge. Total mortality in groups injected with the high dose of strain MT 239 (12%) was also significantly lower (p < 0.05) than mortality in groups injected with strain 33209 (73 %). These data indicate that the attenuated virulence observed with MT 239 in rainbow trout also occurs in a salmonid species highly susceptible to BKD. The reasons for the attenuated virulence of MT 239 were not determined but may be related to the reduced levels of the putative virulence protein p57 associated with this strain.

  2. Interactive effects of water diversion and climate change for juvenile chinook salmon in the lemhi river basin (USA.).

    Science.gov (United States)

    Walters, Annika W; Bartz, Krista K; McClure, Michelle M

    2013-12-01

    The combined effects of water diversion and climate change are a major conservation challenge for freshwater ecosystems. In the Lemhi Basin, Idaho (U.S.A.), water diversion causes changes in streamflow, and climate change will further affect streamflow and temperature. Shifts in streamflow and temperature regimes can affect juvenile salmon growth, movement, and survival. We examined the potential effects of water diversion and climate change on juvenile Chinook salmon (Oncorhynchus tshawytscha), a species listed as threatened under the U.S. Endangered Species Act (ESA). To examine the effects for juvenile survival, we created a model relating 19 years of juvenile survival data to streamflow and temperature and found spring streamflow and summer temperature were good predictors of juvenile survival. We used these models to project juvenile survival for 15 diversion and climate-change scenarios. Projected survival was 42-58% lower when streamflows were diverted than when streamflows were undiverted. For diverted streamflows, 2040 climate-change scenarios (ECHO-G and CGCM3.1 T47) resulted in an additional 11-39% decrease in survival. We also created models relating habitat carrying capacity to streamflow and made projections for diversion and climate-change scenarios. Habitat carrying capacity estimated for diverted streamflows was 17-58% lower than for undiverted streamflows. Climate-change scenarios resulted in additional decreases in carrying capacity for the dry (ECHO-G) climate model. Our results indicate climate change will likely pose an additional stressor that should be considered when evaluating the effects of anthropogenic actions on salmon population status. Thus, this type of analysis will be especially important for evaluating effects of specific actions on a particular species. Efectos Interactivos de la Desviación del Agua y el Cambio Climático en Individuos Juveniles de Salmón Chinook en la Cuenca del Río Lemhi (E.U.A.).

  3. Tuberculosis versus lymphoma in the abdominal lymph nodes: A comparative study using contrast-enhanced MRI

    Energy Technology Data Exchange (ETDEWEB)

    Shao, Heng, E-mail: shaoheng617@126.com [Department of Radiology, West China Hospital, Sichuan University, 37 GuoXue Street, Chengdu, Sichuan 610041 (China); Yang, Zhi-gang, E-mail: yangzg6666@yahoo.com.cn [Department of Radiology, West China Hospital, Sichuan University, 37 GuoXue Street, Chengdu, Sichuan 610041 (China); State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, 37 GuoXue Street, Chengdu, Sichuan 610041 (China); Deng, Wen, E-mail: dengwen0913@163.com [Department of Radiology, West China Hospital, Sichuan University, 37 GuoXue Street, Chengdu, Sichuan 610041 (China); Chen, Jing, E-mail: yzqdcj@126.com [Department of Radiology, West China Hospital, Sichuan University, 37 GuoXue Street, Chengdu, Sichuan 610041 (China); Tang, Si-shi, E-mail: cecilalucky@126.com [Department of Radiology, West China Hospital, Sichuan University, 37 GuoXue Street, Chengdu, Sichuan 610041 (China); Wen, Ling-yi, E-mail: lizzievane@126.com [Department of Radiology, West China Hospital, Sichuan University, 37 GuoXue Street, Chengdu, Sichuan 610041 (China)

    2012-10-15

    Purpose: The purpose of this study was to determine the differential characteristics on MRI between tuberculosis and lymphoma in abdominal lymph nodes. Materials and methods: We conducted a retrospective analysis for the counter, size, signal intensity, enhancement patterns, and anatomic distribution of lymph nodes in 57 consecutive patients with documented tuberculosis (28 patients; 49.1%) and newly diagnosed, untreated lymphoma (29 patients; 50.9%). Results: Twenty-four cases (85.7%) in the tuberculosis group were hyperintense on T2-weighted images and either hypointense or isointense on T1-weighted images with respect to the abdominal wall muscle. All cases in the lymphoma group were hyperintense on T2-weighted images and isointense on T1-weighted images with respect to the abdominal wall muscle. Concerning the main anatomic distribution of lymph nodes, the lymph nodes in the lower paraaortic region were more frequently involved in the lymphoma group (48.3%) than in tuberculosis (17.9%, p < 0.05). Moreover, mesenteric lymph nodes were more often involved in tuberculosis (32.1%) than in lymphoma (6.9%, p < 0.05). Tuberculous lymphadenopathy showed predominantly peripheral enhancement, frequently with a multilocular appearance; whereas lymphomatous adenopathy often demonstrated uniform homogeneous enhancement (all p < 0.001). Conclusion: Contrast-enhanced MRI can be useful in differentiation between these two entities.

  4. Yakima/Klickitat Fisheries Project: Short Project Overview of Spring Chinook Salmon Supplementation in the Upper Yakima Basin; Washington Department of Fish and Wildlife Policy/Technical Involvement and Planning, 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Fast, David E.; Bosch, William J.

    2005-09-01

    were outside of containment objectives were not caused by supplementation activities. Some fish and bird piscivores have been estimated to consume large numbers of salmonids in the Yakima Basin. Natural production of Chinook salmon in the upper Yakima Basin appears to be density dependent under current conditions and may constrain the benefits of supplementation. However, such constraints (if they exist) could be countered by YKFP habitat actions that have resulted in: the protection of over 900 acres of prime floodplain habitat, reconnection and screening of over 15 miles of tributary habitat, substantial water savings through irrigation improvements, and restoration of over 80 acres of floodplain and side channels. Harvest opportunities for tribal and non-tribal fishers have also been enhanced, but are variable among years. The YKFP is still in the early stages of evaluation, and as such the data and findings presented in this report should be considered preliminary until further data is collected and analyses completed. Nonetheless, the YKFP has produced significant findings, and produced methodologies that can be used to evaluate and improve supplementation. A summary table of topical area performance is presented.

  5. Laser-enhanced cavitation during high intensity focused ultrasound: An in vivo study

    OpenAIRE

    Cui, Huizhong; Zhang, Ti; Yang, Xinmai

    2013-01-01

    Laser-enhanced cavitation during high intensity focused ultrasound (HIFU) was studied in vivo using a small animal model. Laser light was employed to illuminate the sample concurrently with HIFU radiation. The resulting cavitation was detected with a passive cavitation detector. The in vivo measurements were made under different combinations of HIFU treatment depths, laser wavelengths, and HIFU durations. The results demonstrated that concurrent light illumination during HIFU has the potentia...

  6. A Nanocomplex System as Targeted Contrast Agent Delivery Vehicle for MRI Dynamic Contrast Enhancement Study

    OpenAIRE

    Korotcov, Alexandru; Shan, Liang; Meng, Huan; Wang, Tongxin; Sridhar, Rajagopalan; Zhao, Yuliang; Liang, Xing-Jie; Wang, Paul C.

    2010-01-01

    We have developed and tested a liposomal nanocomplex system, which contains Gd-DTPA as a payload and transferrin on the surface, as a tumor specific targeting MRI contrast agent for studying prostate cancer tumors in mice. In vivo, the probe significantly enhanced the MRI signal. The image contrast between the peripheral region of the tumor and the non-involved muscle was nearly 50% higher two hours after administration of the nanocomplex. The liposomal nanocomplex increased the amount of Gd ...

  7. Instability strips of main sequence B stars: a parametric study of iron enhancement

    CERN Document Server

    Miglio, A; Montalban, J; Dupret, M A

    2006-01-01

    The discovery of beta Cephei stars in low metallicity environments, as well as the difficulty to theoretically explain the excitation of the pulsation modes observed in some beta Cephei and SPB stars, suggest that the iron opacity ``bump'' provided by standard models could be underestimated. We investigate, by means of a parametric study, the effect of a local iron enhancement on the location of the beta Cephei and SPB instability strips.

  8. Test-Enhanced Learning in Competence-Based Predoctoral Orthodontics: A Four-Year Study.

    Science.gov (United States)

    Freda, Nicolas M; Lipp, Mitchell J

    2016-03-01

    Dental educators intend to promote integration of knowledge, skills, and values toward professional competence. Studies report that retrieval, in the form of testing, results in better learning with retention than traditional studying. The aim of this study was to evaluate test-enhanced experiences on demonstrations of competence in diagnosis and management of malocclusion and skeletal problems. The study participants were all third-year dental students (2011 N=88, 2012 N=74, 2013 N=91, 2014 N=85) at New York University College of Dentistry. The 2013 and 2014 groups received the test-enhanced method emphasizing formative assessments with written and dialogic delayed feedback, while the 2011 and 2012 groups received the traditional approach emphasizing lectures and classroom exercises. The students received six two-hour sessions, spaced one week apart. At the final session, a summative assessment consisting of the same four cases was administered. Students constructed a problem list, treatment objectives, and a treatment plan for each case, scored according to the same criteria. Grades were based on the number of cases without critical errors: A=0 critical errors on four cases, A-=0 critical errors on three cases, B+=0 critical errors on two cases, B=0 critical errors on one case, F=critical errors on four cases. Performance grades were categorized as high quality (B+, A-, A) and low quality (F, B). The results showed that the test-enhanced groups demonstrated statistically significant benefits at 95% confidence intervals compared to the traditional groups when comparing low- and high-quality grades. These performance trends support the continued use of the test-enhanced approach.

  9. Enhancement of Brain Functions During Aging Through Various Exercises: a Review Study

    Directory of Open Access Journals (Sweden)

    Bijay Kumar Bhagat

    2016-09-01

    Full Text Available Introduction: Decline of brain and mental functions with aging is a natural biological phenomenon. Scientists have engaged themselves to find out the different ways to protect degeneration and enhance brain functions. Regular exercise is one of the potential area. However, there are controversial and inconclusive results which create further interest of research. Aim: To review scientific literature related to exercise effect on brain and mental function during aging. Methods: Searches were conducted through electronic databases- PubMed, Medline, Springer link, Elsevier, and Google Scholar. The searching terms were: brain function (brain function or cognition or memory or processing speed or learning or executive function and physical exercise (physical exercise or exercise or stretching exercise or strength exercise. Initial search were 11 review studies and 57 randomized control trials. The current study selected 03 review and 08 randomized control trials studies after fulfillment of its requirement. Findings: Long term (>24 weeks combination exercise (aerobic, strength and stretching training can improve memory functions and processing speed in elderly people. Aerobic exercise training and strength training together can contribute to the improvement of episodic memory, executive functions and processing speed in healthy elderly people. Memory can be enhanced through aerobic exercise training and also by doing strength exercise training in healthy older adults. Interpretations: Changes in different brain and mental functions may be occurred due to structural and functional variations. The structural changes may include change in the volume of hippocampus, neurogenesis, angiogenesis, and so on. The physiological variations can include brain plasticity, increase in brain-derived neurotrophic factor (BDNF, enhancement of Default Mode Network (DMN, increase the activity of proteasome and neprilysin. Conclusions: Aging brain and mental functions

  10. Differentiation of the various lesions causing an abnormality of the endometrial cavity using MR imaging: emphasis on enhancement patterns on dynamic studies and late contrast-enhanced T1-weighted images

    Energy Technology Data Exchange (ETDEWEB)

    Park, Byung Kwan; Kim, Bohyun; Park, Jong Min; Ryu, Jeong Ah [Samsung Medical Center, Sungkyunkwan University School of Medicine, Department of Radiology, Center for Imaging Science, Seoul (Korea); Kim, Mi Sung [Kwandong University College of Medicine, Department of Radiology, Myongji Hospital, Seoul (Korea); Bae, Duk Soo [Samsung Medical Center, Sungkyunkwan University School of Medicine, Department of Obstetrics and Gynecology, Seoul (Korea); Ahn, Geung Hwan [Samsung Medical Center, Sungkyunkwan University School of Medicine, Department of Pathology, Seoul (Korea)

    2006-07-15

    The objectives of this study were to determine the usefulness of magnetic resonance (MR) imaging in the differentiation of various lesions causing an abnormality of the endometrial cavity by evaluating the imaging features on dynamic contrast-enhanced study and late contrast-enhanced T1-weighted images (T1WI). Contrast-enhanced MR imaging of 59 pathologically proven lesions that showed an abnormality of the endometrial cavity, including 32 endometrial cancers, five sarcomas, nine hyperplastic polyps, nine submucosal myomas, three hyperplasia, and one adenomyoma, were retrospectively reviewed. The enhancement degree and patterns on dynamic contrast-enhanced study and late contrast-enhanced T1WI were compared among different pathologies. On dynamic contrast-enhanced study, 72% (23/32) of endometrial cancers showed early peak enhancement to be reached within 1 min following intravenous administration of contrast material. On late-contrast-enhanced T1WI, lesions showed weak enhancement with gradual washout. Ninety-five percent (21/22) of benign lesions and 100% (5/5) of sarcomas showed late peak enhancement to be reached in 2-3 min following intravenous administration of contrast material. On late contrast-enhanced T1WI, both of these lesions showed persistent strong enhancement. Different enhancement patterns on dynamic contrast-enhanced MR imaging and late contrast-enhanced T1WI can provide a useful clue in the differentiation of various lesions causing an abnormality of the endometrial cavity. (orig.)

  11. Effects of summer flow augmentation on the migratory behavior and survival of juvenile Snake River fall Chinook salmon. Annual report 2005

    Science.gov (United States)

    Tiffan, Kenneth F.; Connor, William P.

    2006-01-01

    This report summarizes results of research activities conducted in 2004 and years previous to aid in the management and recovery of fall Chinook salmon Oncorhynchus tshawytscha in the Columbia River basin. For detailed summaries, we refer the reader to the abstracts given on the second page of each chapter. The Annual Reporting section includes information provided to fishery managers in-season and post-season, and it contains a detailed summary of life history and survival statistics on wild Snake River fall Chinook salmon juveniles for the years 1992-2004. Publication is a high priority of our staff. Publication provides our results to a wide audience, and it insures that our work meets high scientific standards. The Bibliography of Published Journal Articles section provides citations for peer-reviewed papers co-authored by personnel of project 1991-02900 that were written or published from 1998 to 2005.

  12. Effects of Summer Flow Augmentation on the Migratory Behavior and Survival of Juvenile Snake River Fall Chinook Salmon; 2002-2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Tiffan, Kenneth F.; Haskell, Craig A. (US Geological Survey, Western Fisheries Research Center, Columbia River Research Laboratory, Cook, WA); Connor, William P. (US Fish and Wildlife Service, Idaho Fishery Resource Office, Ahsahka, ID)

    2003-10-01

    This report summarizes results of research activities conducted in 2002 and years previous to aid in the management and recovery of fall chinook salmon Oncorhynchus tshawytscha in the Columbia River basin. The report is divided into self-standing chapters. For detailed summaries, we refer the reader to the abstracts given on the second page of each chapter. The Annual Reporting section includes information provided to fishery managers in-season and post-season, and it contains a detailed summary of life history and survival statistics on wild Snake River fall chinook salmon juveniles for the years 1992-2002. Peer-review publication remains a high priority of this research project, and it insures that our work meets high scientific standards. The Bibliography of Published Journal Articles section provides citations for peer-reviewed papers coauthored by personnel of project 199102900 that were written or published from 1998 to 2003.

  13. Effects of Summer Flow Augmentation on the Migratory Behavior and Survival of Juvenile Snake River Fall Chinook Salmon; 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Tiffan, Kenneth F. (US Geological Survey, Western Fisheries Research Center, Columbia River Research Laboratory, Cook, WA); Connor, William P. (US Fish and Wildlife Service, Idaho Fishery Resource Office, Ahsahka, ID)

    2006-03-01

    This report summarizes results of research activities conducted in 2004 and years previous to aid in the management and recovery of fall Chinook salmon Oncorhynchus tshawytscha in the Columbia River basin. For detailed summaries, we refer the reader to the abstracts given on the second page of each chapter. The Annual Reporting section includes information provided to fishery managers in-season and post-season, and it contains a detailed summary of life history and survival statistics on wild Snake River fall Chinook salmon juveniles for the years 1992-2004. Publication is a high priority of our staff. Publication provides our results to a wide audience, and it insures that our work meets high scientific standards. The Bibliography of Published Journal Articles section provides citations for peer-reviewed papers co-authored by personnel of project 1991-02900 that were written or published from 1998 to 2005.

  14. Fundamental studies on enhancing heat transfer in contact zone during high efficiency grinding

    Institute of Scientific and Technical Information of China (English)

    XU; Hongjun(徐鸿钧); FU; Yucan(傅玉灿); XU; Xipeng(徐西鹏); XU; Xipeng

    2002-01-01

    On the basis of research on the thermal effect in grinding contact zone during high effi-ciency grinding, an idea of enhancing heat transfer in contact zone using high pressure water jetimpinging is advanced. Fundamental heat transfer experiments on enhancing heat transfer withhigh pressure water jet impinging were completed. The maximum speed of jet impinging reaches110m/s. The experimental results of transient and steady-state experiment prove that the criticalheat flux and the heat-transfer coefficient of water jet impinging are 70 and 30 times those of thepool boiling, respectively. Furthermore, a new grinding fluid supply system was employed to en-hance heat transfer in grinding zone by high-pressure water jet impingement during creep feedgrinding. The experimental results show that high-pressure water jet impinging has remarkablecooling effect. The temperature of the workpiece surface can be steadily kept below 100℃, whilethe workpiece is badly burnt with conventional coolant supply. The study will exploit an importantresearch orientation that has great potentialities in the high efficiency grinding. Further perfectionof this study will not only enable us to increase the available material removal rate to a new levelbut also solve the workpiece burn problem of the difficult-to-machining materials in high efficiencygrinding,

  15. Studies on mechanism of enhanced dissolution of albendazole solid dispersions with crystalline carriers

    Directory of Open Access Journals (Sweden)

    Kalaiselvan R

    2006-01-01

    Full Text Available The main purpose of this research was to study the mechanism of drug release from solid dispersions of albendazole, giving special emphasis to particle size of the drug in solid dispersions. Solid dispersions were prepared using three different carriers, mixing ratios and methods in an attempt to improve the solubility and dissolution rate of albendazole. The mechanism of enhanced dissolution was investigated by a novel dissolution technique as an adjunct to phase solubility study, wettability test, differential scanning calorimetry, X-ray diffractometry, infrared spectroscopy and scanning electron microscopy. The solubility of albendazole was greater with albendazole-poloxamer 407 system, while polyethylene glycol dispersions showed predominant wettability. Physical mixtures showed enhanced dissolution compared with the pure drug, due to improved wetting and solubilization of drug in the diffusion layer offering carrier-rich microenvironment. Preparation of solid dispersion further improved the dissolution compared to the physical mixture, owing to increased surface area for mass transfer, thermodynamically enhanced dissolution of a higher energy amorphous form from the carrier, in addition to improved wetting and solubilization. All carriers showed comparable degree of drug particle size reduction, whereas mixing ratio and method of preparation substantially affected the particle size. Intermolecular association of drug with the carrier led to inhibition of drug recrystallization.

  16. Enhanced ergonomics approaches for product design: a user experience ecosystem perspective and case studies.

    Science.gov (United States)

    Xu, Wei

    2014-01-01

    This paper first discusses the major inefficiencies faced in current human factors and ergonomics (HFE) approaches: (1) delivering an optimal end-to-end user experience (UX) to users of a solution across its solution lifecycle stages; (2) strategically influencing the product business and technology capability roadmaps from a UX perspective and (3) proactively identifying new market opportunities and influencing the platform architecture capabilities on which the UX of end products relies. In response to these challenges, three case studies are presented to demonstrate how enhanced ergonomics design approaches have effectively addressed the challenges faced in current HFE approaches. Then, the enhanced ergonomics design approaches are conceptualised by a user-experience ecosystem (UXE) framework, from a UX ecosystem perspective. Finally, evidence supporting the UXE, the advantage and the formalised process for executing UXE and methodological considerations are discussed. Practitioner Summary: This paper presents enhanced ergonomics approaches to product design via three case studies to effectively address current HFE challenges by leveraging a systematic end-to-end UX approach, UX roadmaps and emerging UX associated with prioritised user needs and usages. Thus, HFE professionals can be more strategic, creative and influential.

  17. Study of Co-Located and Distant Collaboration with Symbolic Support via a Haptics-Enhanced Virtual Reality Task

    Science.gov (United States)

    Yeh, Shih-Ching; Hwang, Wu-Yuin; Wang, Jin-Liang; Zhan, Shi-Yi

    2013-01-01

    This study intends to investigate how multi-symbolic representations (text, digits, and colors) could effectively enhance the completion of co-located/distant collaborative work in a virtual reality context. Participants' perceptions and behaviors were also studied. A haptics-enhanced virtual reality task was developed to conduct…

  18. A comprehensive HIV stigma-reduction and wellness-enhancement community intervention: a case study.

    Science.gov (United States)

    French, Heleen; Greeff, Minrie; Watson, Martha J; Doak, Coleen M

    2015-01-01

    We describe the implementation of a comprehensive HIV stigma-reduction and wellness-enhancement community intervention that focused on people living with HIV (PLWH), as well as people living close to them (PLC) from six designated groups. A holistic multiple case study design was used in urban and rural settings in the North West Province, South Africa. Purposive voluntary sampling was used to recruit the PLWH group; snowball sampling was used for the PLCs. Data were analyzed by means of open coding and text document analysis. The comprehensive nature of the intervention ensured enhancement in relationships in all groups. The increase in knowledge about stigma, coping with it, and improved relationships led to PLWH feeling less stigmatized and more willing to disclose. PLCs became aware of their stigmatizing behaviors and were empowered to lead stigma reduction in their communities. Many community members were reached through these initiatives.

  19. Enhanced heating of salty ice and water under microwaves: molecular dynamics study.

    Science.gov (United States)

    Tanaka, Motohiko; Sato, Motoyasu

    2008-01-01

    Through the use of molecular dynamics simulations, we have studied the enhanced heating of salty ice and water by the electric field of applied microwaves at 2.5 GHz, and in the range of 2.5-10 GHz for the frequency dependence. We show that water molecules in salty ice are allowed to rotate in response to the microwave electric field to the extent comparable to those in pure water because the molecules in salty ice are loosely tied by hydrogen bonds with adjacent molecules unlike rigidly bonded pure ice. The weakening of hydrogen-bonded network of molecules in salty ice is mainly due to the electrostatic effect of salt ions rather than the short-range geometrical (size) effect of salt since the presence of salt ions with small radii causes similar enhanced heating.

  20. Study on Enhancement in Gibbsite Precipitation of Bayer Process under 33 kHz Ultrasound

    Institute of Scientific and Technical Information of China (English)

    Jihua ZHAO; Qiyuan CHEN

    2003-01-01

    The enhancement of gibbsite precipitation in Bayer process by 33 kHz ultrasound has been studied. From orthomethod experiment, the optimized operating parameters of treatment under 33 kHz ultrasonic cleaner have obtained.Compared with crystallization of Al(OH)3 without treatment of ultrasound, the precipitation time is reduced by 15 h when the precipitation ratio is 45%. From the results of grain size distribution and SEM photographs of gibbsite, it is found that secondary nucleation and agglomeration could be enhanced under 33 kHz ultrasound. The products are same from comparison of X-ray powder diffraction, but the Raman spectrum of sodium aluminate solution under 33 kHz ultrasound is different from that without ultrasound.

  1. A Study on Enhancement of Filtration Process with Filter Aids Diatomaceous Earth and Wood Pulp Cellulose

    Institute of Scientific and Technical Information of China (English)

    都丽红; 陈旭; 李文苹; 朱企新

    2011-01-01

    In this paper, a study to enhance the filtration for solid/liquid materials difficult to be filtered, such as highly viscous, highly compactible or gel like materials, is presented. Filter aids diatomaceous earth and wood pulp cellulose are used to enhance the filtration by improving filter cake structure and properties in the filtration of a biological health product and a highly viscous chemical fiber polymer melt product. The property of solid/liquidsystems, filtration at different flow rates, specitic cake resistance, cake wetness, filtration rate, filtrate turbidity for filter aid selection and evaluation, and operation optimization are investigated. The results are successfully applied to industrial process, .and can be used as a reference for similar filtration applications.

  2. Study on CO{sub 2} absorption enhancement by adding active carbon particles into MEA solution

    Energy Technology Data Exchange (ETDEWEB)

    Qian, Juan; Sun, Rui; Ma, Lian; Sun, Shaozeng [Harbin Institute of Technology, Harbin (China). School of Energy Science and Engineering

    2013-07-01

    The chemical absorption of CO{sub 2} is generally recognized as the most efficient post-combustion technology of CO{sub 2} separation at present. A study on CO{sub 2} absorption enhancement by adding small particles of active carbon into MEA solution is investigated within a self-designed glass stirring tank. Experiments of different particle loadings and different particle sizes have been conducted. When active carbon particle concentration is fewer, compared to the absorption rate of CO{sub 2} gas absorbed by MEA aqueous solution, the role of active carbon adsorption CO{sub 2} gas is negligible. The enhancement efficiency of CO{sub 2} absorption could be improved by 10% to the upmost in this liquid-particle system.

  3. Enhancing research quality and reporting: why the Journal of Comorbidity is now publishing study protocols

    Directory of Open Access Journals (Sweden)

    Susan Smith

    2014-08-01

    Full Text Available The Journal of Comorbidity was launched in 2011 and has since become established as a high-quality journal that publishes open-access, peer-reviewed articles, with a focus on advancing the clinical management of patients with comorbidity/multimorbidity. To further enhance research quality and reporting of studies in this field, the journal is now offering authors the opportunity to publish a summary of their study protocols – a move designed to generate interest and raise awareness in ongoing clinical research and to enable researchers to detail their methodologies in order that replication by scientific peers is possible.

  4. A salty-congruent odor enhances saltiness: functional magnetic resonance imaging study.

    Science.gov (United States)

    Seo, Han-Seok; Iannilli, Emilia; Hummel, Cornelia; Okazaki, Yoshiro; Buschhüter, Dorothee; Gerber, Johannes; Krammer, Gerhard E; van Lengerich, Bernhard; Hummel, Thomas

    2013-01-01

    Excessive intake of dietary salt (sodium chloride) may increase the risk of chronic diseases. Accordingly, various strategies to reduce salt intake have been conducted. This study aimed to investigate whether a salty-congruent odor can enhance saltiness on the basis of psychophysical (Experiment 1) and neuroanatomical levels (Experiment 2). In Experiment 1, after receiving one of six stimulus conditions: three odor conditions (odorless air, congruent, or incongruent odor) by two concentrations (low or high) of either salty or sweet taste solution, participants were asked to rate taste intensity and pleasantness. In Experiment 2, participants received the same stimuli during the functional magnetic resonance imaging scan. In Experiment 1, compared with an incongruent odor and/or odorless air, a congruent odor enhanced not only taste intensity but also either pleasantness of sweetness or unpleasantness of saltiness. In Experiment 2, a salty-congruent combination of odor and taste produced significantly higher neuronal activations in brain regions associated with odor-taste integration (e.g., insula, frontal operculum, anterior cingulate cortex, and orbitofrontal cortex) than an incongruent combination and/or odorless air with taste solution. In addition, the congruent odor-induced saltiness enhancement was more pronounced in the low-concentrated tastant than in the high-concentrated one. In conclusion, this study demonstrates the congruent odor-induced saltiness enhancement on the basis of psychophysical and neuroanatomical results. These findings support an alternative strategy to reduce excessive salt intake by adding salty-congruent aroma to sodium reduced food. However, there are open questions regarding the salty-congruent odor-induced taste unpleasantness.

  5. Photo-enhanced field emission study of TiO{sub 2} nanotubes array

    Energy Technology Data Exchange (ETDEWEB)

    Chavan, Padmakar G.; Shende, Sugat V.; Joag, Dilip S. [Center for Advanced Studies in Materials Science and Condensed Matter Physics, Department of Physics, University of Pune, Pune 411007 (India); More, Mahendra A., E-mail: mam@physics.unipune.ac.in [Center for Advanced Studies in Materials Science and Condensed Matter Physics, Department of Physics, University of Pune, Pune 411007 (India)

    2011-05-15

    Aligned TiO{sub 2} nanotubes were synthesized by simple anodization of the Ti foil surface. The as-anodized product is further characterized by SEM, XRD, and PL. The tube inner diameter is found to be {approx}60-80 nm with the average wall thickness {approx}30 nm and areal density {approx}15x10{sup 6}/ cm{sup 2}. FE studies of the aligned TiO{sub 2} nanotubes are carried out at base pressure of {approx}1x10{sup -8} mbar. The turn-on field observed for an emission current density of {approx}10 {mu}A/cm{sup 2} is found to be {approx}1.7 V/{mu}m and current density of {approx}44 {mu}A/cm{sup 2} is obtained at an applied field of {approx}2.3 V/{mu}m. Photo-enhanced FE study is carried out by shining visible and UV light on the cathode. The aligned TiO{sub 2} nanotubes show sensitivity to both the light sources. The FE current shows fast switching response to the visible light. The increment in the preset current upon UV illumination can be attributed to the band edge excitation of the electrons. The free excitons associated with band gap of the TiO{sub 2} nanotubes array may be responsible for the visible light sensitivity. TiO{sub 2} nanotubes are also grown on the Ti wire and exhibit similar photo-enhanced behavior. The FE and photo-enhanced FE properties demonstrate the applicability of the aligned TiO{sub 2} nanotubes in the FE based micro/nanoelectronic devices. -- Research Highlights: {yields} TiO{sub 2} nanotubes array is easily synthesized by simple anodization method. {yields} Field emission results are found to be superior. {yields} Good correlation is found between photoluminescence, photo-enhanced field emission, and photoconductivity of the TiO{sub 2}.

  6. Economics of Fishery Failure: The Fall of the King-Analysis of U.S. West Coast Chinook Salmon (Oncorhyncus Tshawytscha)

    Science.gov (United States)

    2011-09-01

    economic resources and strategic implications. Sovereignty and exclusive economic fisheries ownership were effectively banned by the Magna Carta in 1215...limited catch allowed, fishers move toward or actually operate at a loss for effort expended. Figure 19. Stock size growth replenishment capacity...catch was obtained from PFMC All Species Reports, for the years 1981 to 2007, for California, Oregon and Washington. Actual catch in the Chinook

  7. A mesocasm study of enhanced anaerobic biodegradation of petroleum hydrocarbons in groundwater

    Energy Technology Data Exchange (ETDEWEB)

    Fan, X.; Guigard, S.; Biggar, K. [Alberta Univ., Edmonton, AB (Canada). Dept. of Civil and Environmental Engineering; Foght, J.; Semple, K. [Alberta Univ., Edmonton, AB (Canada). Dept. of Biological Sciences

    2005-07-01

    Under certain conditions, Natural Attenuation (NA) processes can act to reduce the mass, toxicity, mobility, volume or concentrations of contaminants in soil or groundwater within a reasonable time frame. NA processes are considered to be a more cost-effective remediation approach than engineered processes. However, the rates of biodegradation in cold regions are slower and occasionally the processes are nutrient or Terminal Electron Acceptor (TEA) limited. These limitations may make NA less viable due to slower rates of biological activity. This paper discusses the results of a mesocasm study conducted in laboratory-controlled conditions to investigate the TEA and nutrient enhanced anaerobic biodegradation of petroleum hydrocarbons in groundwater from two sites in Alberta. Target compounds for the study were BTEX and the CCME F1 fraction. Samples taken from the site were used to set up 11 L mesocasms with a water to soil ratio of 10:1 under anaerobic conditions. The samples were amended with nitrate and sulfate and then incubated. Sub-sampling was carried out once a month to monitor substrate consumption, TEA depletion and evolution of biogenic gases. Microbial enumeration and metabolite analysis were also done. No final conclusions could be drawn from the study, which had only been carried out for 6 months at the time that this paper was written. However, results to date have indicated that the method of mesocasms and sub-sampling are applicable to anaerobic biodegradation studies. In addition, nutrient supplementation appears to enhance nitrate and sulfate reduction. However, the TEA depletion was greater than expected and could not be explained by the substrate consumption. Results also indicated that the groundwater from site 1 was sulfate-limited, suggesting that sulfate amendment could enhance anaerobic biodegradation of CCME F1 petroleum hydrocarbons. Data from the ongoing study may provide additional insi