Directory of Open Access Journals (Sweden)
Po-Chen Shih
2010-01-01
Full Text Available We have designed and fabricated a novel chemotactic gradient Labchip for studying cell migration quantitatively. Owing to the great potential of garlic and its preparations in developing antiinflammatory drugs, the aim of the present study is to investigate the effect of garlic oil on the locomotion of a neutrophil-like cell by measuring the dynamic features of cell migration including migration direction, average migration speed, chemotactic index (CI, and motility index (MI with the newly designed Labchip. We found that garlic oil treatment lowered the values of CI and MI and reduced the average speed of cell migration from 13 to 8 μm/min. The results indicate that garlic oil is a potential inhibitor for neutrophil-like cell migration and chemotactic responsiveness. By comparing with the effects of nocodazole and cytochalasin B, we also suggest that the antiinflammatory activity exhibited by garlic oil was mainly through inhibiting the assembly-disassembly processes of the cytoskeleton.
Gradient sensing in defined chemotactic fields.
Skoge, Monica; Adler, Micha; Groisman, Alex; Levine, Herbert; Loomis, William F; Rappel, Wouter-Jan
2010-11-01
Cells respond to a variety of secreted molecules by modifying their physiology, growth patterns, and behavior. Motile bacteria and eukaryotic cells can sense extracellular chemoattractants and chemorepellents and alter their movement. In this way fibroblasts and leukocytes can find their way to sites of injury and cancer cells can home in on sites that are releasing growth factors. Social amoebae such as Dictyostelium are chemotactic to cAMP which they secrete several hours after they have initiated development. These eukaryotic cells are known to be able to sense extremely shallow gradients but the processes underlying their exquisite sensitivity are still largely unknown. In this study we determine the responses of developed cells of Dictyostelium discoideum to stable linear gradients of cAMP of varying steepness generated in 2 μm deep gradient chambers of microfluidic devices. The gradients are generated by molecular diffusion between two 80 μm deep flow-through channels, one of which is perfused with a solution of cAMP and the other with buffer, serving as continuously replenished source and sink. These low ceiling gradient chambers constrained the cells in the vertical dimension, facilitating confocal imaging, such that subcellular localization of fluorescently tagged proteins could be followed for up to 30 min without noticeable phototoxicity. Chemotactic cells enter these low ceiling chambers by flattening and elongating and then move almost as rapidly as unconstrained cells. By following the localization of activated Ras (RasGTP) using a Ras Binding Domain fused to Green Fluorescent Protein (RBD-GFP), we observed the rapid appearance of membrane associated patches at the tips of pseudopods. These patches remained associated with pseudopods while they continued to extend but were rapidly disassembled when pseudopods stalled and the cell moved past them. Likewise, fluorescence associated with localized RasGTP rapidly disappeared when the gradient was turned
Dynamics of Chemotactic Droplets in Salt Concentration Gradients
DEFF Research Database (Denmark)
Cejkova, J.; Novak, M.; Stepanek, F.;
2014-01-01
The chemotactic movement of decanol droplets in aqueous solutions of sodium decanoate in response to concentration gradients of NaCl has been investigated. Key parameters of the chemotactic response, namely the induction time and the migration velocity, have been evaluated as a function of the so...
Gradient sensing in defined chemotactic fields
Skoge, Monica; Adler, Micha; Groisman, Alex; Levine, Herbert; Loomis, William F.; Rappel, Wouter-Jan
2010-01-01
Cells respond to a variety of secreted molecules by modifying their physiology, growth patterns, and behavior. Motile bacteria and eukaryotic cells can sense extracellular chemoattractants and chemorepellents and alter their movement. In this way fibroblasts and leukocytes can find their ways to sites of injury and cancer cells can home in on sites that are releasing growth factors. Social amoebae such as Dictyostelium are chemotactic to cAMP which they secrete several hours after they have i...
Harvey, R. W.; Ford, R. M.; Metge, D. W.; Wang, M.; Toepfer, A. A.; McGowan, S. B.
2008-05-01
Due to our increasing dependence upon groundwater resources, there is a growing need to remediate shallow aquifers contaminated with chlorinated solvents. Often, trichloroethene (TCE) travels into zones of low permeability thereby making removal difficult by traditional pump-and-treat technologies. In addition, degradation of TCE by native microbial communities can result in buildup of highly toxic intermediates such as vinyl chloride. Bioaugmentation, involving addition of specialized bacterial consortia to an aquifer, can facilitate more complete degradation into harmless byproducts. Also, it is believed that chemotaxis, the ability of bacteria to swim towards higher concentrations of a chemical perceived as beneficial to survival, may expedite movement of introduced bacteria to where they are needed. However, there is no quantitative information about chemotaxis at the field scale and the evidence for bacterial chemotaxis during bioaugmentation has been largely anecdotal. In this study, the chemotactic migration of the bacterium, Pseudomonas stutzeri in a TCE-contaminated, sand- and-gravel aquifer in Cape Cod, Massachusetts was measured. P. stutzeri is known to denitrify as well as degrade a variety of aromatic and chlorinated solvents and is often advocated as a candidate for bioaugmentation. This bacterium was genetically engineered to be resistant to ampicillin and produce blue- fluorescing protein (BFP) in order to facilitate maintaining the bacteria in pure culture and later to track them in the environment. The study involved a natural-gradient injection and recovery test in which vertical gradients of an electron donor (acetate) and acceptor (nitrate) were created within the sandy aquifer sediments above an amendment of the genetically engineered P. stutzeri. The bacteria, nitrate, and acetate were allowed to be advected with the natural flow of groundwater past close-interval, multi-level samplers that were installed downgradient from the points of
Hydrodynamical random walker with chemotactic memory
Mohammady, H.; Esckandariun, B.; Najafi, A.
2014-01-01
A three-dimensional hydrodynamical model for a micro random walker is combined with the idea of chemotactic signaling network of E. coli. Diffusion exponents, orientational correlation functions and their dependence on the geometrical and dynamical parameters of the system are analyzed numerically. Because of the chemotactic memory, the walker shows superdiffusing displacements in all directions with the largest diffusion exponent for a direction along the food gradient. Mean square displacem...
Identification of a chemotactic sensitivity in a coupled system
Fister, K Renee
2007-01-01
Chemotaxis is the process by which cells behave in a way that follows the chemical gradient. Applications to bacteria growth, tissue inflammation, and vascular tumors provide a focus on optimization strategies. Experiments can characterize the form of possible chemotactic sensitivities. This paper addresses the recovery of the chemotactic sensitivity from these experiments while allowing for nonlinear dependence of the parameter on the state variables. The existence of solutions to the forward problem is analyzed. The identification of a chemotactic parameter is determined by inverse problem techniques. Tikhonov regularization is investigated and appropriate convergence results are obtained. Numerical results of concentration dependent chemotactic terms are explored.
Chemotactic Behavior of Azotobacter vinelandii
Haneline, Stephen; Connelly, Carla J.; Melton, Thoyd
1991-01-01
Chemotaxis was exhibited by Azotobacter vinelandii motile cells. Exposure of cells to sudden increases in attractant concentration suppressed the frequency of tumbling and resulted in smooth swimming. Cells responded chemotactically to a chemical gradient produced during metabolism. Motility occurred over a temperature range of 25 to 37°C with an optimum pH range of between pH 7.0 and 8.0. The average speed of motile cells was determined to be 74 μm/s or 37 body lengths per s. The speed of ce...
Lushnikov, Pavel M.
2009-01-01
A Keller-Segel model describes macroscopic dynamics of bacterial colonies and biological cells. Bacteria secret chemical which attracts other bacteria so that they move towards chemical gradient creating nonlocal attraction between bacteria. If bacterial density exceeds a critical value then the density collapses (blows up) in a finite time which corresponds to bacterial aggregation. Collapse in the Keller-Segel model has striking qualitative similarities with a nonlinear Schrodinger equation...
Directory of Open Access Journals (Sweden)
Hyun-Ok Song
Full Text Available It is clinically important to be able to detect influenza A/H1N1 virus using a fast, portable, and accurate system that has high specificity and sensitivity. To achieve this goal, it is necessary to develop a highly specific primer set that recognizes only influenza A viral genes and a rapid real-time PCR system that can detect even a single copy of the viral gene. In this study, we developed and validated a novel fluidic chip-type real-time PCR (LabChip real-time PCR system that is sensitive and specific for the detection of influenza A/H1N1, including the pandemic influenza strain A/H1N1 of 2009. This LabChip real-time PCR system has several remarkable features: (1 It allows rapid quantitative analysis, requiring only 15 min to perform 30 cycles of real-time PCR. (2 It is portable, with a weight of only 5.5 kg. (3 The reaction cost is low, since it uses disposable plastic chips. (4 Its high efficiency is equivalent to that of commercially available tube-type real-time PCR systems. The developed disposable LabChip is an economic, heat-transferable, light-transparent, and easy-to-fabricate polymeric chip compared to conventional silicon- or glass-based labchip. In addition, our LabChip has large surface-to-volume ratios in micro channels that are required for overcoming time consumed for temperature control during real-time PCR. The efficiency of the LabChip real-time PCR system was confirmed using novel primer sets specifically targeted to the hemagglutinin (HA gene of influenza A/H1N1 and clinical specimens. Eighty-five human clinical swab samples were tested using the LabChip real-time PCR. The results demonstrated 100% sensitivity and specificity, showing 72 positive and 13 negative cases. These results were identical to those from a tube-type real-time PCR system. This indicates that the novel LabChip real-time PCR may be an ultra-fast, quantitative, point-of-care-potential diagnostic tool for influenza A/H1N1 with a high sensitivity and
Lushnikov, Pavel M.
2010-04-01
A Keller-Segel model describes macroscopic dynamics of bacterial colonies and biological cells as well as dynamics of a gas of self-gravitating Brownian particles. Bacteria secret chemical which attracts other bacteria so that they move towards chemical gradient creating nonlocal attraction between bacteria. If bacterial (or Brownian particle) density exceeds a critical value then the density collapses (blows up) in a finite time which corresponds to bacterial aggregation or gravitational collapse. Collapse in the Keller-Segel model has striking qualitative similarities with a nonlinear Schrödinger equation including critical collapse in two dimensions and supercritical collapse in three dimensions. A self-similar solution near blow up point is studied in the critical two-dimensional case and it has a form of a rescaled steady state solution which contains a critical number of bacteria. Time dependence of scaling of that solution has square root scaling law with logarithmic modification.
International Nuclear Information System (INIS)
A Keller-Segel model describes macroscopic dynamics of bacterial colonies and biological cells as well as dynamics of a gas of self-gravitating Brownian particles. Bacteria secret chemical which attracts other bacteria so that they move towards chemical gradient creating nonlocal attraction between bacteria. If bacterial (or Brownian particle) density exceeds a critical value then the density collapses (blows up) in a finite time which corresponds to bacterial aggregation or gravitational collapse. Collapse in the Keller-Segel model has striking qualitative similarities with a nonlinear Schroedinger equation including critical collapse in two dimensions and supercritical collapse in three dimensions. A self-similar solution near blow up point is studied in the critical two-dimensional case and it has a form of a rescaled steady state solution which contains a critical number of bacteria. Time dependence of scaling of that solution has square root scaling law with logarithmic modification.
Energy Technology Data Exchange (ETDEWEB)
Lushnikov, Pavel M., E-mail: plushnik@math.unm.ed [Department of Mathematics and Statistics, University of New Mexico, Albuquerque, NM 87131 (United States)
2010-04-05
A Keller-Segel model describes macroscopic dynamics of bacterial colonies and biological cells as well as dynamics of a gas of self-gravitating Brownian particles. Bacteria secret chemical which attracts other bacteria so that they move towards chemical gradient creating nonlocal attraction between bacteria. If bacterial (or Brownian particle) density exceeds a critical value then the density collapses (blows up) in a finite time which corresponds to bacterial aggregation or gravitational collapse. Collapse in the Keller-Segel model has striking qualitative similarities with a nonlinear Schroedinger equation including critical collapse in two dimensions and supercritical collapse in three dimensions. A self-similar solution near blow up point is studied in the critical two-dimensional case and it has a form of a rescaled steady state solution which contains a critical number of bacteria. Time dependence of scaling of that solution has square root scaling law with logarithmic modification.
Stability and dynamics of anisotropically-tumbling chemotactic swimmers
Lushi, Enkeleida
2016-01-01
Micro-swimmers such as bacteria E. coli are known to perform random walks known as run-and-tumbles to move up chemo-attractant gradients and as a result aggregate. It is also known that such micro-swimmers can self-organize into macroscopic patterns due to interactions with neighboring cells through the fluidic environment they live in. While the pattern formation resulting from chemotactic and hydrodynamic interactions separately and together have been previously investigated, the effect of the tumbling anisotropy in micro-swimmers has been unexplored. Here we show through linear analysis and full nonlinear simulations that the slight anisotropy in the individual swimmer tumbles can alter the collective pattern formation in non-trivial ways. We show that the tumbling anisotropy diminishes the magnitude of the chemotactic aggregates but may result in more such aggregation peaks.
Human sperm pattern of movement during chemotactic re-orientation towards a progesterone source
Institute of Scientific and Technical Information of China (English)
Cecilia Soledad Blengini; Maria Eugenia Teves; Diego Rafael Unates; Hector Alejandro Guidobaldi; Laura Virginia Gatica; Laura Cecilia Giojalas
2011-01-01
@@ Human spermatozoa may chemotactically find out the egg by following an increasing gradient of attractant molecules.Although human spermatozoa have been observed to show several of the physiological characteristics of chemotaxis,the chemotactic pattern of movement has not been easy to describe.However,it is apparent that chemotactic cells may be identified while returning to the attractant source.This study characterizes the pattern of movement of human spermatozoa during chemotactic re-orientation towards a progesterone source,which is a physiological attractant candidate.By means of videomicroscopy and image analysis,a chemotactic pattern of movement was identified as the spermatozoon returned towards the source of a chemotactic concentration of progesterone (10 pmol l-1).First,as a continuation of its original path,the spermatozoon swims away from the progesterone source with linear movement and then turns back with a transitional movement that can be characterized by an increased velocity and decreased linearity.This sperm behaviour may help the spermatozoon to re-orient itself towards a progesterone source and may be used to identify the few cells that are undergoing chemotaxis at a given time.
Jeans type analysis of chemotactic collapse
Chavanis, Pierre-Henri
2007-01-01
We perform a linear dynamical stability analysis of a general hydrodynamic model of chemotactic aggregation [Chavanis & Sire, Physica A, in press (2007)]. Specifically, we study the stability of an infinite and homogeneous distribution of cells against ``chemotactic collapse''. We discuss the analogy between the chemotactic collapse of biological populations and the gravitational collapse (Jeans instability) of self-gravitating systems. Our hydrodynamic model involves a pressure force which can take into account several effects like anomalous diffusion or the fact that the organisms cannot interpenetrate. We also take into account the degradation of the chemical which leads to a shielding of the interaction like for a Yukawa potential. Finally, our hydrodynamic model involves a friction force which quantifies the importance of inertial effects. In the strong friction limit, we obtain a generalized Keller-Segel model similar to the generalized Smoluchowski-Poisson system describing self-gravitating Langevi...
Totti, Noel; McCusker, Kevin T.; Campbell, Edward J.; Griffin, Gail L.; Senior, Robert M.
1984-01-01
Neutrophils contribute to chronic bronchitis and pulmonary emphysema associated with cigarette smoking. Nicotine was found to be chemotactic for human neutrophils but not monocytes, with a peak activity at ~ 31 micromolar. In lower concentrations (comparable to those in smokers' plasma), nicotine enhanced the response of neutrophils to two chemotactic peptides. In contrast to most other chemoattractants for neutrophils, however, nicotine did not affect degranulation or superoxide production. Nicotine thus may promote inflammation and consequent lung injury in smokers.
Study of the Chemotactic Response of Multicellular Spheroids in a Microfluidic Device
Jose M Ayuso; Basheer, Haneen A.; Rosa Monge; Pablo Sánchez-Álvarez; Manuel Doblaré; Shnyder, Steven D.; Victoria Vinader; Kamyar Afarinkia; Luis J Fernández; Ignacio Ochoa
2015-01-01
We report the first application of a microfluidic device to observe chemotactic migration in multicellular spheroids. A microfluidic device was designed comprising a central microchamber and two lateral channels through which reagents can be introduced. Multicellular spheroids were embedded in collagen and introduced to the microchamber. A gradient of fetal bovine serum (FBS) was established across the central chamber by addition of growth media containing serum into one of the lateral channe...
Kinetic and hydrodynamic models of chemotactic aggregation
Chavanis, Pierre-Henri
2007-01-01
We derive general kinetic and hydrodynamic models of chemotactic aggregation that describe certain features of the morphogenesis of biological colonies (like bacteria, amoebae, endothelial cells or social insects). Starting from a stochastic model defined in terms of N coupled Langevin equations, we derive a nonlinear mean field Fokker-Planck equation governing the evolution of the distribution function of the system in phase space. By taking the successive moments of this kinetic equation and using a local thermodynamic equilibrium condition, we derive a set of hydrodynamic equations involving a damping term. In the limit of small frictions, we obtain a hyperbolic model describing the formation of network patterns (filaments) and in the limit of strong frictions we obtain a parabolic model which is a generalization of the standard Keller-Segel model describing the formation of clusters (clumps). Our approach connects and generalizes several models introduced in the chemotactic literature. We discuss the anal...
Jeans type analysis of chemotactic collapse
Chavanis, Pierre-Henri; Sire, Clément
2008-07-01
We perform a linear dynamical stability analysis of a general hydrodynamic model of chemotactic aggregation [P.H. Chavanis, C. Sire, Physica A 384 (2007) 199]. Specifically, we study the stability of an infinite and homogeneous distribution of cells against “chemotactic collapse”. We discuss the analogy between the chemotactic collapse of biological populations and the gravitational collapse (Jeans instability) of self-gravitating systems. Our hydrodynamic model involves a pressure force which can take into account several effects like anomalous diffusion or the fact that the organisms cannot interpenetrate. We also take into account the degradation of the chemical which leads to a shielding of the interaction like for a Yukawa potential. Finally, our hydrodynamic model involves a friction force which quantifies the importance of inertial effects. In the strong friction limit, we obtain a generalized Keller-Segel model similar to the generalized Smoluchowski-Poisson system describing self-gravitating Langevin particles. For small frictions, we obtain a hydrodynamic model of chemotaxis similar to the Euler-Poisson system describing a self-gravitating barotropic gas. We show that an infinite and homogeneous distribution of cells is unstable against chemotactic collapse when the “velocity of sound” in the medium is smaller than a critical value. We study in detail the linear development of the instability and determine the range of unstable wavelengths, the growth rate of unstable modes and the damping rate, or the pulsation frequency, of the stable modes as a function of the friction parameter and shielding length. For specific equations of state, we express the stability criterion in terms of cell density.
Auto-chemotactic micro-swimmer suspensions: modeling, analysis and simulations
Lushi, Enkeleida; Shelley, Michael J
2013-01-01
Microorganisms can preferentially orient and move along gradients of a chemo-attractant (i.e., chemotax) while colonies of many microorganisms can collectively undergo complex dynamics in response to chemo-attractants that they themselves produce. For colonies or groups of micro-swimmers we investigate how an "auto-chemotactic" response that should lead to swimmer aggregation is affected by the non-trivial fluid flows that are generated by collective swimming. For this, we consider chemotaxis models based upon a hydrodynamic theory of motile suspensions that are fully coupled to chemo-attractant production, transport, and diffusion. Linear analysis of isotropically ordered suspensions reveals both an aggregative instability due to chemotaxis that occurs independently of swimmer type, and a hydrodynamic instability when the swimmers are "pushers". Nonlinear simulations show nonetheless that hydrodynamic interactions can significantly modify the chemotactically-driven aggregation dynamics in suspensions of "pus...
A chemotactic inhibitor in synovial fluid.
Matzner, Y; Partridge, R E; Babior, B M
1983-01-01
Synovial fluid was found to contain an inhibitor of neutrophil chemotaxis. The activity of this inhibitor was masked in native synovial fluid, but could be detected in fluid in which complement had been deactivated by mild heating. The inhibitor was most effective against the chemotactic activity of zymosan-activated serum (C5ades arg). It had little effect when N-formyl-methionyl-leucyl-phenylalanine served as chemoattractant. Inhibition was not the result of a direct effect on the neutrophils, since incubation of cells with synovial fluid did not alter their chemotactic response. The inhibitory activity was destroyed by boiling the synovial fluid or treating it with trypsin, suggesting that it is a protein (or proteins); it was not affected by hyaluronidase treatment. Gel filtration revealed that the inhibitor was present in native as well as decomplemented synovial fluid, and that its molecular weight was in the vicinity of 25,000. It is proposed that this inhibitory activity plays a role in the regulation of the inflammatory response in joints. PMID:6840801
The stability of a homogeneous suspension of chemotactic bacteria
Subramanian, G.; Koch, Donald L.; Fitzgibbon, Sean R.
2011-04-01
The linear stability of a homogeneous dilute suspension of chemotactic bacteria in a constant chemoattractant gradient is analyzed. The bacteria execute a run-and-tumble motion, typified by the species E. coli, wherein periods of smooth swimming (runs) are interrupted by abrupt uncorrelated changes in swimming direction (tumbles). Bacteria tumble less frequently when swimming toward regions of higher chemoattractant concentration, leading to a mean bacterial orientation and velocity in the base state. The stability of an unbounded suspension, both with and without a chemoattractant, is controlled by coupled long wavelength perturbations of the fluid velocity and bacterial orientation fields. In the former case, the most unstable perturbations have their wave vector oriented along the chemoattractant gradient. Chemotaxis reduces the critical bacteria concentration, for the onset of collective swimming, compared with that predicted by Subramanian and Koch ["Critical bacterial concentration for the onset of collective swimming," J. Fluid Mech. 632, 359 (2009)] in the absence of a chemoattractant. A part of this decrease may be attributed to the increase in the mean tumbling time in the presence of a chemoattractant gradient. A second destabilizing influence comes from the ability of the shearing motion, associated with a velocity perturbation in which the velocity and chemical gradients are aligned, to sweep prealigned bacteria into the local extensional quadrant thereby creating a stronger destabilizing active stress than in an initially isotropic suspension. The chemoattractant gradient also fundamentally alters the unstable spectrum for any finite wavenumber. In suspensions of bacteria that do not tumble, Saintillan and Shelley ["Instabilities and pattern formation in active particle suspensions: Kinetic theory and continuum simulations," Phys. Rev. Lett. 100, 178103 (2008); "Instabilities, pattern formation and mixing in active suspensions," Phys. Fluids 20
Mathematics of Experimentally Generated Chemoattractant Gradients
M. Postma; P.J.M. van Haastert
2016-01-01
Many eukaryotic cells move in the direction of a chemical gradient. Several assays have been developed to measure this chemotactic response, but no complete mathematical models of the spatial and temporal gradients are available to describe the fundamental principles of chemotaxis. Here we provide a
Automated Chemotactic Sorting and Single-cell Cultivation of Microbes using Droplet Microfluidics
Dong, Libing; Chen, Dong-Wei; Liu, Shuang-Jiang; Du, Wenbin
2016-04-01
We report a microfluidic device for automated sorting and cultivation of chemotactic microbes from pure cultures or mixtures. The device consists of two parts: in the first part, a concentration gradient of the chemoeffector was built across the channel for inducing chemotaxis of motile cells; in the second part, chemotactic cells from the sample were separated, and mixed with culture media to form nanoliter droplets for encapsulation, cultivation, enumeration, and recovery of single cells. Chemotactic responses were assessed by imaging and statistical analysis of droplets based on Poisson distribution. An automated procedure was developed for rapid enumeration of droplets with cell growth, following with scale-up cultivation on agar plates. The performance of the device was evaluated by the chemotaxis assays of Escherichia coli (E. coli) RP437 and E. coli RP1616. Moreover, enrichment and isolation of non-labelled Comamonas testosteroni CNB-1 from its 1:10 mixture with E. coli RP437 was demonstrated. The enrichment factor reached 36.7 for CNB-1, based on its distinctive chemotaxis toward 4-hydroxybenzoic acid. We believe that this device can be widely used in chemotaxis studies without necessarily relying on fluorescent labelling, and isolation of functional microbial species from various environments.
Watteaux, Romain; Stocker, Roman; Taylor, John R
2015-12-21
In this study, we use direct numerical simulations (DNS) to investigate the response of chemotactic bacteria to an isolated patch of chemoattractant in a turbulent environment. Previous work has shown that by stirring nutrients that are chemoattractants into a network of thin, elongated filaments, turbulence directly influences the rate at which chemotactic bacteria consume nutrients. However, the quantitative outcome of this process is influenced by a host of physical and biological factors, and many of these remain unexplored. Here, we analyse the sensitivity of nutrient uptake by chemotactic bacteria on a wide range of physical and biological parameters using a series of controlled DNS. Starting with uniformly distributed populations of motile and non-motile bacteria in a fully developed homogeneous, isotropic turbulent flow, we inject a patch of dissolved nutrients. We then assess the chemotactic advantage, defined as the difference between the nutrients consumed by motile and non-motile bacteria over the lifetime of the patch. We find that the chemotaxis can enhance the total uptake rate by a factor of 1.6 and allows the population of chemotactic bacteria to absorb nutrients 2.2 times faster than non-motile bacteria Results show that chemotactic bacteria are subject to a trade-off between swimming to leave regions devoid of nutrients and, once a nutrient gradient is detected, staying in regions of large nutrient concentration. These findings could help explain how the physical characteristics of turbulent marine ecosystems influence the optimal biological traits of bacteria through the competition for limited resources. PMID:26392215
Study of the Chemotactic Response of Multicellular Spheroids in a Microfluidic Device
Ayuso, Jose M.; Basheer, Haneen A.; Monge, Rosa; Sánchez-Álvarez, Pablo; Doblaré, Manuel; Shnyder, Steven D.; Vinader, Victoria; Afarinkia, Kamyar
2015-01-01
We report the first application of a microfluidic device to observe chemotactic migration in multicellular spheroids. A microfluidic device was designed comprising a central microchamber and two lateral channels through which reagents can be introduced. Multicellular spheroids were embedded in collagen and introduced to the microchamber. A gradient of fetal bovine serum (FBS) was established across the central chamber by addition of growth media containing serum into one of the lateral channels. We observe that spheroids of oral squamous carcinoma cells OSC–19 invade collectively in the direction of the gradient of FBS. This invasion is more directional and aggressive than that observed for individual cells in the same experimental setup. In contrast to spheroids of OSC–19, U87-MG multicellular spheroids migrate as individual cells. A study of the exposure of spheroids to the chemoattractant shows that the rate of diffusion into the spheroid is slow and thus, the chemoattractant wave engulfs the spheroid before diffusing through it. PMID:26444904
Study of the Chemotactic Response of Multicellular Spheroids in a Microfluidic Device.
Directory of Open Access Journals (Sweden)
Jose M Ayuso
Full Text Available We report the first application of a microfluidic device to observe chemotactic migration in multicellular spheroids. A microfluidic device was designed comprising a central microchamber and two lateral channels through which reagents can be introduced. Multicellular spheroids were embedded in collagen and introduced to the microchamber. A gradient of fetal bovine serum (FBS was established across the central chamber by addition of growth media containing serum into one of the lateral channels. We observe that spheroids of oral squamous carcinoma cells OSC-19 invade collectively in the direction of the gradient of FBS. This invasion is more directional and aggressive than that observed for individual cells in the same experimental setup. In contrast to spheroids of OSC-19, U87-MG multicellular spheroids migrate as individual cells. A study of the exposure of spheroids to the chemoattractant shows that the rate of diffusion into the spheroid is slow and thus, the chemoattractant wave engulfs the spheroid before diffusing through it.
Study of the Chemotactic Response of Multicellular Spheroids in a Microfluidic Device.
Ayuso, Jose M; Basheer, Haneen A; Monge, Rosa; Sánchez-Álvarez, Pablo; Doblaré, Manuel; Shnyder, Steven D; Vinader, Victoria; Afarinkia, Kamyar; Fernández, Luis J; Ochoa, Ignacio
2015-01-01
We report the first application of a microfluidic device to observe chemotactic migration in multicellular spheroids. A microfluidic device was designed comprising a central microchamber and two lateral channels through which reagents can be introduced. Multicellular spheroids were embedded in collagen and introduced to the microchamber. A gradient of fetal bovine serum (FBS) was established across the central chamber by addition of growth media containing serum into one of the lateral channels. We observe that spheroids of oral squamous carcinoma cells OSC-19 invade collectively in the direction of the gradient of FBS. This invasion is more directional and aggressive than that observed for individual cells in the same experimental setup. In contrast to spheroids of OSC-19, U87-MG multicellular spheroids migrate as individual cells. A study of the exposure of spheroids to the chemoattractant shows that the rate of diffusion into the spheroid is slow and thus, the chemoattractant wave engulfs the spheroid before diffusing through it. PMID:26444904
Chemotactic Behavior of Pathogenic and Nonpathogenic Leptospira Species
Lambert, Ambroise; Takahashi, Naoko; Charon, Nyles W.; Picardeau, Mathieu
2012-01-01
We have developed a capillary tube assay in combination with real-time PCR to quantitate the number of chemoattracted Leptospira cells. We identified Tween 80, glucose, sucrose, and pyruvate as attractants for Leptospira cells; amino acids and vitamin B12 were found to be nonchemotactic or weakly chemotactic. This assay has the general applicability to further our understanding of leptospiral chemotaxis.
Ford, R.; Boser, B.
2012-12-01
Bioremediation processes depend on contact between microbial populations and the groundwater contaminants that they biodegrade. Chemotaxis, the ability of bacteria to sense a chemical gradient and swim preferentially toward locations of higher concentration, can enhance the transport of bacteria toward contaminant sources that may not be readily accessible by advection and dispersion alone. A two-dimensional rectangular-shaped microcosm packed with quartz sand was used to quantify the effect of chemotaxis on the migration of bacteria within a saturated model aquifer system. Artificial groundwater was pumped through the microcosm at a rate of approximately 1 m/day. A plume of sodium benzoate was created by continuous injection into an upper port of the microcosm to generate a chemical gradient in the vertical direction transverse to flow. Chemotactic bacteria, Pseudomonas putida F1, or the nonchemotactic mutant, P. putida F1 CheA, were injected with a conservative tracer in a port several centimeters below the benzoate position. As the injectates traversed the one-meter length of the microcosm, samples were collected from a dozen effluent ports to determine vertical concentration distributions for the bacteria, benzoate and tracer. A moment analysis was implemented to estimate the center of mass, variance, and skewness of the concentration profiles. The transverse dispersion coefficient and the transverse dispersivity for chemotactic and nonchemotactic bacteria were also evaluated. Experiments performed with a continuous injection of bacteria showed that the center of mass for chemotactic bacteria was closer to the benzoate source on average than the nonchemotactic control (relative to the conservative tracer). These results demonstrated that chemotaxis can increase bacterial transport toward contaminants, potentially enhancing the effectiveness of in situ bioremediation. Experiments with 2 cm and 3 cm spacing between bacteria and benzoate injection locations were
Maternal circulating leukocytes display early chemotactic responsiveness during late gestation
Directory of Open Access Journals (Sweden)
Gomez-Lopez Nardhy
2013-01-01
Full Text Available Abstract Background Parturition has been widely described as an immunological response; however, it is unknown how this is triggered. We hypothesized that an early event in parturition is an increased responsiveness of peripheral leukocytes to chemotactic stimuli expressed by reproductive tissues, and this precedes expression of tissue chemotactic activity, uterine activation and the systemic progesterone/estradiol shift. Methods Tissues and blood were collected from pregnant Long-Evans rats on gestational days (GD 17, 20 and 22 (term gestation. We employed a validated Boyden chamber assay, flow cytometry, quantitative real time-polymerase chain reaction, and enzyme-linked immunosorbent assays. Results We found that GD20 maternal peripheral leukocytes migrated more than those from GD17 when these were tested with GD22 uterus and cervix extracts. Leukocytes on GD20 also displayed a significant increase in chemokine (C-C motif ligand 2 (Ccl2 gene expression and this correlated with an increase in peripheral granulocyte proportions and a decrease in B cell and monocyte proportions. Tissue chemotactic activity and specific chemokines (CCL2, chemokine (C-X-C motif ligand 1/CXCL1, and CXCL10 were mostly unchanged from GD17 to GD20 and increased only on GD22. CXCL10 peaked on GD20 in cervical tissues. As expected, prostaglandin F2α receptor and oxytocin receptor gene expression increased dramatically between GD20 and 22. Progesterone concentrations fell and estradiol-17β concentrations increased in peripheral serum, cervical and uterine tissue extracts between GD20 and 22. Conclusion Maternal circulating leukocytes display early chemotactic responsiveness, which leads to their infiltration into the uterus where they may participate in the process of parturition.
Directory of Open Access Journals (Sweden)
Lili Jiang
2010-04-01
Full Text Available Escherichia coli chemotactic motion in spatiotemporally varying environments is studied by using a computational model based on a coarse-grained description of the intracellular signaling pathway dynamics. We find that the cell's chemotaxis drift velocity v(d is a constant in an exponential attractant concentration gradient [L] proportional, variantexp(Gx. v(d depends linearly on the exponential gradient G before it saturates when G is larger than a critical value G(C. We find that G(C is determined by the intracellular adaptation rate k(R with a simple scaling law: G(C infinity k(1/2(R. The linear dependence of v(d on G = d(ln[L]/dx directly demonstrates E. coli's ability in sensing the derivative of the logarithmic attractant concentration. The existence of the limiting gradient G(C and its scaling with k(R are explained by the underlying intracellular adaptation dynamics and the flagellar motor response characteristics. For individual cells, we find that the overall average run length in an exponential gradient is longer than that in a homogeneous environment, which is caused by the constant kinase activity shift (decrease. The forward runs (up the gradient are longer than the backward runs, as expected; and depending on the exact gradient, the (shorter backward runs can be comparable to runs in a spatially homogeneous environment, consistent with previous experiments. In (spatial ligand gradients that also vary in time, the chemotaxis motion is damped as the frequency omega of the time-varying spatial gradient becomes faster than a critical value omega(c, which is controlled by the cell's chemotaxis adaptation rate k(R. Finally, our model, with no adjustable parameters, agrees quantitatively with the classical capillary assay experiments where the attractant concentration changes both in space and time. Our model can thus be used to study E. coli chemotaxis behavior in arbitrary spatiotemporally varying environments. Further experiments are
Marangoni-driven chemotaxis, chemotactic collapse, and the Keller-Segel equation
Shelley, Michael; Masoud, Hassan
2013-11-01
Almost by definition, chemotaxis involves the biased motion of motile particles along gradients of a chemical concentration field. Perhaps the most famous model for collective chemotaxis in mathematical biology is the Keller-Segel model, conceived to describe collective aggregation of slime mold colonies in response to an intrinsically produced, and diffusing, chemo-attractant. Heavily studied, particularly in 2D where the system is ``super-critical'', it has been proved that the KS model can develop finite-time singularities - so-called chemotactic collapse - of delta-function type. Here, we study the collective dynamics of immotile particles bound to a 2D interface above a 3D fluid. These particles are chemically active and produce a diffusing field that creates surface-tension gradients along the surface. The resultant Marangoni stresses create flows that carry the particles, possibly concentrating them. Remarkably, we show that this system involving 3D diffusion and fluid dynamics, exactly yields the 2D Keller-Segel model for the surface-flow of active particles. We discuss the consequences of collapse on the 3D fluid dynamics, and generalizations of the fluid-dynamical model.
Directional memory arises from long-lived cytoskeletal asymmetries in polarized chemotactic cells.
Prentice-Mott, Harrison V; Meroz, Yasmine; Carlson, Andreas; Levine, Michael A; Davidson, Michael W; Irimia, Daniel; Charras, Guillaume T; Mahadevan, L; Shah, Jagesh V
2016-02-01
Chemotaxis, the directional migration of cells in a chemical gradient, is robust to fluctuations associated with low chemical concentrations and dynamically changing gradients as well as high saturating chemical concentrations. Although a number of reports have identified cellular behavior consistent with a directional memory that could account for behavior in these complex environments, the quantitative and molecular details of such a memory process remain unknown. Using microfluidics to confine cellular motion to a 1D channel and control chemoattractant exposure, we observed directional memory in chemotactic neutrophil-like cells. We modeled this directional memory as a long-lived intracellular asymmetry that decays slower than observed membrane phospholipid signaling. Measurements of intracellular dynamics revealed that moesin at the cell rear is a long-lived element that when inhibited, results in a reduction of memory. Inhibition of ROCK (Rho-associated protein kinase), downstream of RhoA (Ras homolog gene family, member A), stabilized moesin and directional memory while depolymerization of microtubules (MTs) disoriented moesin deposition and also reduced directional memory. Our study reveals that long-lived polarized cytoskeletal structures, specifically moesin, actomyosin, and MTs, provide a directional memory in neutrophil-like cells even as they respond on short time scales to external chemical cues. PMID:26764383
Adaptation and optimal chemotactic strategy for E. coli
International Nuclear Information System (INIS)
Extending the classic works of Berg and Purcell on the biophysics of bacterial chemotaxis, we find the optimal chemotactic strategy for the peritrichous bacterium E. coli in the high and low signal to noise ratio limits. The optimal strategy depends on properties of the environment and properties of the individual bacterium, and is therefore highly adaptive. We review experiments relevant to testing both the form of the proposed strategy and its adaptability, and propose extensions of them which could test the limits of the adaptability in this simplest sensory processing system. copyright 1998 The American Physical Society
Jeans type instability for a chemotactic model of cellular aggregation
Chavanis, Pierre-Henri
2008-01-01
We consider an inertial model of chemotactic aggregation generalizing the Keller-Segel model and we study the linear dynamical stability of an infinite and homogeneous distribution of cells (bacteria, amoebae, endothelial cells,...) when inertial effects are accounted for. These inertial terms model cells directional persistance. We determine the condition of instability and the growth rate of the perturbation as a function of the cell density and the wavelength of the perturbation. We discuss the differences between overdamped (Keller-Segel) and inertial models. Finally, we show the analogy between the instability criterion for biological populations and the Jeans instability criterion in astrophysics.
Mathematics of Experimentally Generated Chemoattractant Gradients.
Postma, Marten; van Haastert, Peter J M
2016-01-01
Many eukaryotic cells move in the direction of a chemical gradient. Several assays have been developed to measure this chemotactic response, but no complete mathematical models of the spatial and temporal gradients are available to describe the fundamental principles of chemotaxis. Here we provide analytical solutions for the gradients formed by release of chemoattractant from a point source by passive diffusion or forced flow (micropipettes) and gradients formed by laminar diffusion in a Zigmond chamber. The results show that gradients delivered with a micropipette are formed nearly instantaneously, are very steep close to the pipette, and have a steepness that is strongly dependent on the distance from the pipette. In contrast, gradients in a Zigmond chamber are formed more slowly, are nearly independent of the distance from the source, and resemble the temporal and spatial properties of the natural cAMP wave that Dictyostelium cells experience during cell aggregation. PMID:27271915
DETECTION OF A NEUTROPHIL CHEMOTACTIC FACTOR IN JAPANESE ENCEPHALITIS PATIENTS
Directory of Open Access Journals (Sweden)
Aditi Singh
2012-12-01
Full Text Available Japanese encephalitis (JE one of the most common cause of acute encephalitis in tropical regions, has generated much public anxiety in India. An early influx of macrophages followed by neutrophils at the site of injury in different organs in humans and mice has previously been reported. It correlated with production of a neutrophil chemotactic protein derived from macrophages. In the present study out of a total of 324 acute encephalitic patients, admitted in Gandhi memorial and associated hospitals, Lucknow, 121 patients with one or more indicators of JE virus infection were included. Significant pleocytosis (mean TLC value of 126+52 cells / mm3 in CSF and leucocytosis (>11,000 cells/mm3 in peripheral blood was observed at the time of admission. The leucocytosis increased significantly during second week in 67% of patients. The peripheral blood mononuclear cells culture done on alternate days was tested for chemotactic activity (hMDF, which was observed to be highest in second week of illness. The direct detection of hMDF in circulation by dot blot was positive in 92% of acute serum samples, with negligible (12.5% reactivity for convalescent sera. A correlation between the hMDF levels and severity of illness has also been observed.
Diversity of chemotactic heterotrophic bacteria associated with arctic cyanobacteria.
Prasad, Sathish; Pratibha, Mambatta Shankaranarayanan; Manasa, Poorna; Buddhi, Sailaja; Begum, Zareena; Shivaji, Sisinthy
2013-01-01
The abundance and diversity of chemotactic heterotrophic bacteria associated with Arctic cyanobacteria was determined. The viable numbers ranged between 10(4) and 10(6) cell g(-1) cyanobacterial biomass. A total of 112 morphotypes, representing 22 phylotypes based on their 16S rRNA sequence similarity were isolated from the samples. All the phylotypes were Gram-negative with affiliation to the proteobacterial and bacteroidetes divisions. Among the 22 phylotypes, 14 were chemotactic to glucose. Majority of the phylotypes were psychrotolerant showing growth up to 30 °C. Representatives of Alphaproteobacteria, the genus Flavobacterium and the gammaproteobacterial Alcanivorax sp, were psychrophilic with growth at or below 18 °C. A significant percentage of phylotypes were pigmented (~68 %), rich in unsaturated membrane fatty acids and tolerated pH values and NaCl concentrations between 5.0-8.0 and 0.15-1.0 M, respectively. The percentages of phylotypes producing extracellular cold-active enzymes at 4 °C were amylase (18.18 %), lipase and urease (45.45 %), caseinase (59.09 %) and gelatinase (31.8 %). PMID:23053490
Energy Technology Data Exchange (ETDEWEB)
Gallin, J.I.
1974-01-01
The above studies demonstrate that the /sup 51/Cr radiolabel chemotactic assay is a relatively simple and objective means for studying leukocyte chemotaxis in both normal and pathological conditions. Application of this method to studies of normal human chemotaxis revealed a relatively narrow range of normal and little day-to-day variability. Analysis of this variability revealed that there is more variability among the response of different granulocytes to a constant chemotactic stimulus than among the chemotactic activity of different sera to a single cell source. Utilizing the /sup 51/Cr radioassay, the abnormal granulocyte chemotactic behavior reported in Chediak-Higashi syndrome and a patient with recurrent pyogenic infections and mucocutaneous candidiasis has been confirmed. The /sup 51/Cr chemotactic assay has also been used to assess the generation of chemotactic activity from human serum and plasma. The in vitro generation of two distinct chemotactic factors were examined; the complement product (C5a) and kallikrein, an enzyme of the kinin-generating pathway. Kinetic analysis of complement-related chemotactic factor formation, utilizing immune complexes or endotoxin to activate normal sera in the presence or absence of EGTA as well as kinetic analysis of activation of C2-deficient human serum, provided an easy means of distinguishing the classical (antibody-mediated) complement pathway from the alternate pathway. Such kinetic analysis is necessary to detect clinically important abnormalities since, after 60 min of generation time, normal chemotactic activity may be present despite complete absence or inhibition of one complement pathway. The chemotactic factor generated by either pathway of complement activation appears to be predominately attributable to C5a.
Effect of selective phosphodiesterase inhibitors on the rat eosinophil chemotactic response in vitro
Directory of Open Access Journals (Sweden)
Alves Alessandra C
1997-01-01
Full Text Available In the present study, we have performed a comparative analysis of the effect of selective inhibitors of phosphodiesterase (PDE type III, IV and V on eosinophil chemotaxis triggered by platelet activating factor (PAF and leukotriene B4 (LTB4 in vitro. The effect of the analogues N6-2'-O-dibutyryladenosine 3':5' cyclic monophosphate (Bt2 cyclic AMP and N2-2'-O- dibutyrylguanosine 3':5' cyclic monophosphate (Bt2 cyclic GMP has also been determined. The eosinophils were obtained from the peritoneal cavity of naive Wistar rats and purified in discontinuous Percoll gradients to 85-95% purity. We observed that pre-incubation of eosinophils with the PDE type IV inhibitor rolipram suppressed the chemotactic response triggered by PAF and LTB4, in association with an increase in the intracellular levels of cyclic AMP. In contrast, neither zaprinast (type V inhibitor nor type III inhibitors milrinone and SK&F 94836 affected the eosinophil migration. Only at the highest concentration tested did the analogue Bt2 cyclic AMP suppress the eosinophil chemotaxis, under conditions where Bt2 cyclic GMP was ineffective. We have concluded that inhibition of PDE IV, but not PDE III or V, was able to block the eosinophil chemotaxis in vitro, suggesting that the suppressive activity of selective PDE IV inhibitors on tissue eosinophil accumulation may, at least, be partially dependent on their ability to directly inhibit the eosinophil migration.
Enhancement of Chemotactic Cell Aggregation by Haptotactic Cell-To-Cell Interaction.
Directory of Open Access Journals (Sweden)
Tae-Goo Kwon
Full Text Available The crawling of biological cell is a complex phenomenon involving various biochemical and mechanical processes. Some of these processes are intrinsic to individual cells, while others pertain to cell-to-cell interactions and to their responses to extrinsically imposed cues. Here, we report an interesting aggregation dynamics of mathematical model cells, when they perform chemotaxis in response to an externally imposed global chemical gradient while they influence each other through a haptotaxis-mediated social interaction, which confers intriguing trail patterns. In the absence of the cell-to-cell interaction, the equilibrium population density profile fits well to that of a simple Keller-Segal population dynamic model, in which a chemotactic current density [Formula: see text] competes with a normal diffusive current density [Formula: see text], where p and ρ refer to the concentration of chemoattractant and population density, respectively. We find that the cell-to-cell interaction confers a far more compact aggregation resulting in a much higher peak equilibrium cell density. The mathematical model system is applicable to many biological systems such as swarming microglia and neutrophils or accumulating ants towards a localized food source.
Ca2+ spikes in the flagellum control chemotactic behavior of sperm.
Böhmer, Martin; Van, Qui; Weyand, Ingo; Hagen, Volker; Beyermann, Michael; Matsumoto, Midori; Hoshi, Motonori; Hildebrand, Eilo; Kaupp, Ulrich Benjamin
2005-08-01
The events that occur during chemotaxis of sperm are only partly known. As an essential step toward determining the underlying mechanism, we have recorded Ca2+ dynamics in swimming sperm of marine invertebrates. Stimulation of the sea urchin Arbacia punctulata by the chemoattractant or by intracellular cGMP evokes Ca2+ spikes in the flagellum. A Ca2+ spike elicits a turn in the trajectory followed by a period of straight swimming ('turn-and-run'). The train of Ca2+ spikes gives rise to repetitive loop-like movements. When sperm swim in a concentration gradient of the attractant, the Ca2+ spikes and the stimulus function are synchronized, suggesting that precise timing of Ca2+ spikes controls navigation. We identified the peptide asterosap as a chemotactic factor of the starfish Asterias amurensis. The Ca2+ spikes and swimming behavior of sperm from starfish and sea urchin are similar, implying that the signaling pathway of chemotaxis has been conserved for almost 500 million years. PMID:16001082
A Worldwide Competition to Compare the Speed and Chemotactic Accuracy of Neutrophil-Like Cells
Wong, Elisabeth; Hamza, Bashar; Bae, Albert; Martel, Joseph; Kataria, Rama; Keizer-Gunnink, Ineke; Kortholt, Arjan; Van Haastert, Peter J. M.; Charras, Guillaume; Janetopoulos, Christopher; Irimia, Daniel
2016-01-01
Chemotaxis is the ability to migrate towards the source of chemical gradients. It underlies the ability of neutrophils and other immune cells to hone in on their targets and defend against invading pathogens. Given the importance of neutrophil migration to health and disease, it is crucial to understand the basic mechanisms controlling chemotaxis so that strategies can be developed to modulate cell migration in clinical settings. Because of the complexity of human genetics, Dictyostelium and HL60 cells have long served as models system for studying chemotaxis. Since many of our current insights into chemotaxis have been gained from these two model systems, we decided to compare them side by side in a set of winner-take-all races, the Dicty World Races. These worldwide competitions challenge researchers to genetically engineer and pharmacologically enhance the model systems to compete in microfluidic racecourses. These races bring together technological innovations in genetic engineering and precision measurement of cell motility. Fourteen teams participated in the inaugural Dicty World Race 2014 and contributed cell lines, which they tuned for enhanced speed and chemotactic accuracy. The race enabled large-scale analyses of chemotaxis in complex environments and revealed an intriguing balance of speed and accuracy of the model cell lines. The successes of the first race validated the concept of using fun-spirited competition to gain insights into the complex mechanisms controlling chemotaxis, while the challenges of the first race will guide further technological development and planning of future events. PMID:27332963
Bacterial chemotactic oligopeptides and the intestinal mucosal barrier
International Nuclear Information System (INIS)
Intestinal absorption and enterohepatic circulation of N-formyl-methionyl-leucyl-125I-tyrosine, a bioactive synthetic analog of the bacterial chemotactic peptide N-formyl-methionyl-leucyl-phenylalanine has been investigated in the rat. In ileum and proximal and distal colon, dithiothreitol, which increases mucosal permeability, increased peptide absorption and biliary recovery fourfold, 70-fold, and 20-fold over control values, respectively. When dithiothreitol was combined with d-l-benzyl succinate, a potent inhibitor of intestinal carboxypeptidase, absorption and biliary recovery from ileal loops increased markedly to 40-fold over control, whereas there was no further increase in absorption from colon loops. There was a strong correlation between biliary N-formyl-methionyl-leucyl-125I-tyrosine recovery and intestinal absorption of 51Cr-ethylenediaminetetraacetate, a marker of passive mucosal permeability (r = 0.97). We conclude that in the ileum both enzymic degradation and restricted mucosal permeability contribute to the intestinal barrier to luminal bacterial formyl oligopeptides. In the colon, however, enzymic mechanisms are less active and restricted mucosal permeability is the major factor. Abnormalities of the intestinal mucosal barrier to proinflammatory bacterial peptides could play a role in inflammatory disorders of the gut
Chemotactic Activity on Human Neutrophils to Streptococcus mutans
Directory of Open Access Journals (Sweden)
Tetiana Haniastuti
2013-07-01
Full Text Available Objective: The aim of this study was to evaluate chemotactic activity o neutrophil to S. mutans. Chemotaxis assay was performed in blind well chambers. Materials and Methods: Hanks balanced salt solution (HBSS containing 106 S. mutans, 108 S. mutans, 10-8 M fMLP, or HBSS alone were placed in the lower wells of the chamber and covered with polycorbonate membrane filter. Neutrophils suspension (2x105 cells was then placed in the upper compartment. After incubation for 60 mins at 37ºC in a humidified atmosphere with 5% CO2, the filters were removed and stained with Giemsa. Result: ANOVA revealed statistically significant differences among groups (p<0.05, indicating that S. mutans induced neutrophils chemotaxis. The number of neutrophils migration in response to 108 S. mutans and 106 S. mutans were signifiantly greater compared to fMLP (p<0.05. Conclusion: S. mutans may activate human neutrophils, resulting in the chemotaxis of the neutrophils.DOI: 10.14693/jdi.v16i2.99
Sonic hedgehog is a chemotactic neural crest cell guide that is perturbed by ethanol exposure.
Tolosa, Ezequiel J; Fernández-Zapico, Martín E; Battiato, Natalia L; Rovasio, Roberto A
2016-01-01
Our aim was to understand the involvement of Sonic hedgehog (Shh) morphogen in the oriented distribution of neural crest cells (NCCs) toward the optic vesicle and to look for potential disorders of this guiding mechanism after ethanol exposure. In vitro directional analysis showed the chemotactic response of NCCs up Shh gradients and to notochord co-cultures (Shh source) or to their conditioned medium, a response inhibited by anti-Shh antibody, receptor inhibitor cyclopamine and anti-Smo morpholino (MO). Expression of the Ptch-Smo receptor complex on in vitro NCCs was also shown. In whole embryos, the expression of Shh mRNA and protein was seen in the ocular region, and of Ptch, Smo and Gli/Sufu system on cephalic NCCs. Anti-Smo MO or Ptch-mutated plasmid (Ptch1(Δloop2)) impaired cephalic NCC migration/distribution, with fewer cells invading the optic region and with higher cell density at the homolateral mesencephalic level. Beads embedded with cyclopamine (Smo-blocking) or Shh (ectopic signal) supported the role of Shh as an in vivo guide molecule for cephalic NCCs. Ethanol exposure perturbed in vitro and in vivo NCC migration. Early stage embryos treated with ethanol, in a model reproducing Fetal Alcohol Syndrome, showed later disruptions of craniofacial development associated with abnormal in situ expression of Shh morphogen. The results show the Shh/Ptch/Smo-dependent migration of NCCs toward the optic vesicle, with the support of specific inactivation with genetic and pharmacological tools. They also help to understand mechanisms of accurate distribution of embryonic cells and of their perturbation by a commonly consumed teratogen, and demonstrate, in addition to its other known developmental functions, a new biological activity of cellular guidance for Shh. PMID:26979762
Chemotactic behavior of the sperm of chitons (Mollusca: Polyplacophora).
Miller, R L
1977-11-01
Observations of sperm behavior in the vicinity of gradients of egg-water or alcohol extracts of whole freshly-spawned eggs of several chitons reveal what appear to be directed movements of sperm up the gradient, resulting in the aggregation of motile sperm at the gradient source. Plots of the tracks of the sperm approaching the gradient source show that the cells increase the time during which they move toward the source and decrease the time spent moving away. Although this resembles the kinesis behavior shown by bacteria in a gradient, the path directions are markedly non-random. The reorientation behavior of thigmotactic sperm involves enlargement of the normal circular path diameter in the direction of the source and an alternation of tight loops and wide circular arcs, with the latter made in the direction of the source. The form of the path of attracted chiton sperm is like that observed during chemotaxis of the sperm of the hydroid Tubularia and the tunicate Ciona and resembles the behavior of Ciona sperm in that there is no increase in velocity as the cells move up the gradient. However, unlike the cnidarian and urochordate cases, the attracting substances extracted from chiton eggs do not act species-specifically. PMID:925668
Growth and chemosensory behavior of sulfate-reducing bacteria in oxygen-sulfide gradients
DEFF Research Database (Denmark)
Sass, Andrea M.; Wieland, Andrea Eschemann; Kühl, Michael; Thar, Roland Matthias; Sass, Henrik; Cypionka, H.
2002-01-01
actively change the extension and slope of the gradients by oxygen reduction with lactate or even sulfide as electron donor. Generally, the chemotactic behavior was in agreement with a defense strategy that re-establishes anoxic conditions, thus promoting anaerobic growth and, in a natural community...
Collective Chemotactic Dynamics in the Presence of Self-Generated Fluid Flows
Lushi, Enkeleida; Shelley, Michael J
2012-01-01
In micro-swimmer suspensions locomotion necessarily generates fluid motion, and it is known that such flows can lead to collective behavior from unbiased swimming. We examine the complementary problem of how chemotaxis is affected by self-generated flows. A kinetic theory coupling run-and-tumble chemotaxis to the flows of collective swimming shows separate branches of chemotactic and hydrodynamic instabilities for isotropic suspensions, the first driving aggregation, the second producing increased orientational order in suspensions of "pushers" and maximal disorder in suspensions of "pullers". Nonlinear simulations show that hydrodynamic interactions can limit and modify chemotactically-driven aggregation dynamics. In puller suspensions the dynamics form aggregates that are mutually-repelling due to the non-trivial flows. In pusher suspensions chemotactic aggregation can lead to destabilizing flows that fragment the regions of aggregation.
Nutrient exposure of chemotactic organisms in small-scale turbulent flows
Energy Technology Data Exchange (ETDEWEB)
Munoz-Garcia, Javier [Systems Biology Ireland and Grupo Interdisciplinar de Sistemas Complejos (GISC), University College Dublin, Belfield, Dublin 4 (Ireland); Neufeld, Zoltan [School of Mathematical Sciences and Complex and Adaptive Systems Laboratory, University College Dublin, Belfield, Dublin 4 (Ireland); Torney, Colin, E-mail: javiermunozgarcia@gmail.co [Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544 (United States)
2010-10-15
Micro-organisms living in a turbulent fluid environment often use directed motility to locate regions of higher than average nutrient concentrations. Here, we consider a simple continuum model for the distribution of such chemotactic particles when the particles and the chemoattractant are both advected by a turbulent flow. The influence of chemotactic sensitivity on the spatial distribution of the particles is characterized for different types of advected chemical fields. Using an effective diffusion approximation, we obtain an analytical expression for the nutrient exposure resulting from the chemotactic activity of the particles, generalizing previous results obtained for the case of phototaxis in flows. We show that the biological advantage of chemotaxis in such systems is determined by the spatial variability of the averaged chemoattractant field and the effective diffusivity of the turbulent flow.
DEFF Research Database (Denmark)
Benfield, T L; Kharazmi, A; Larsen, C G; Lundgren, J D
1997-01-01
been shown to confer a poor prognosis in PCP. We therefore investigated the potential of BAL fluid from 17 patients with PCP to induce neutrophil chemotaxis. BAL fluid from patients induced considerable neutrophil chemotactic activity compared to normal controls. Elevated levels of IL-8 were detected...... in patient samples as compared to controls. A specific anti-IL-8 antibody significantly reduced chemotactic activity of patient samples by more than 50%. In conclusion, IL-8 appears to be a significant participant of neutrophil chemotaxis in AIDS-associated PCP, and may participate in the recruitment...
Controlling Interneuron Activity in Caenorhabditis Elegans to Evoke Chemotactic Behaviour
Kocabas, Askin; Shen, Ching-Han; Guo, Zengcai V.; Ramanathan, Sharad
2012-01-01
Animals locate and track chemoattractive gradients in the environment to find food. With its small nervous system, Caenorhabditis elegans is a good model system in which to understand how the dynamics of neural activity control this search behaviour. Extensive work on the nematode has identified the neurons that are necessary for the different locomotory behaviours underlying chemotaxis through the use of laser ablation, activity recording in immobilized animals and the study of mutants. Howe...
DEFF Research Database (Denmark)
Vorum, H; Madsen, Peder; Rasmussen, H H;
1996-01-01
Psoriasin is a novel chemotactic inflammatory protein that possesses weak similarity to the S100 family members of Ca(2+)-binding proteins, and that is highly up-regulated in hyperproliferative psoriatic keratinocytes. Here we have used the psoriasin cDNA to express recombinant human (rh) psoriasin...
Draft Genome Sequence of Halomonas sp. KHS3, a Polyaromatic Hydrocarbon-Chemotactic Strain
Gasperotti, Ana Florencia; Studdert, Claudia Alicia; Revale, Santiago; Herrera Seitz, María Karina
2015-01-01
The draft genome sequence of Halomonas sp. KHS3, isolated from seawater from Mar del Plata harbor, is reported. This strain is able to grow using aromatic compounds as a carbon source and shows strong chemotactic response toward these substrates. Genes involved in motility, chemotaxis, and degradation of aromatic hydrocarbons were identified.
Stanczyk, Joanna; Kowalski, Marek L; Grzegorczyk, Janina; Szkudlinska, Barbara; Jarzebska, Marzanna; Marciniak, Marek; Synder, Marek
2005-12-14
A massive accumulation of inflammatory cells in synovial tissues is a major pathological feature of rheumatoid arthritis (RA). Neutrophiles dominate synovial fluid while rheumatoid synovium is infiltrated with mononuclear cells. Mechanisms regulating influx of particular subpopulations of leukocytes into articular cavity and synovium compartment are not completely defined. An increasing amount of data supports a crucial role of a C-C chemokine RANTES in the RA pathogenesis. Our objective is to evaluate chemotactic activity for neutrophils (NCA), lymphocytes (LCA), and monocytes (MoCA) in SFs obtained from patients with RA and osteoarthritis (OA). We also aimed to characterise the relation between chemotactic activity, RANTES, and percentage distribution of leukocytes in SF. SFs from 11 patients with RA and 6 with OA were included in the study. Modified microchamber Boyden method was employed to assess chemotactic activity. Cytological and biochemical analysis of SF was performed. RANTES was measured with ELISA. Rheumatoid SFs were rich in cells with predominance of neutrophiles while osteoarthritic fluids were lymphocytic. RA SFs were also characterised by increased lactoferrin level. Both NCA and LCA were higher in SF from patients with RA (62 +/- 12 and 24 +/- 6 cells/HPF, resp) as compared to patients with OA (23 +/- 6; P < .05 and 6 +/- 2 cells/HPF; P < 0.05). The chemoattractive effect of RA SF was more pronounced on neutrophiles than on lymphocytes. RA SF expressed high RANTES levels (145+/- 36 pg/mL), while OA SF was characterised by only trace amount of this chemokine (2 +/- 1 pg/mL). We found positive correlation of RANTES with chemotactic activity for mononuclear cells (LCA + MoCA; R = 0.61; P < .05). Surprisingly, RANTES correlated also positively with neutrophiles number (R = 0.77; P < 0.001). Rheumatoid SF possesses strong chemotactic potency for leukocytes. RANTES is overexpressed in RA SF and is a potential mediator influencing intensity and
An enzyme immunoassay for detection of Japanese encephalitis virus-induced chemotactic cytokine
Indian Academy of Sciences (India)
Aditi Singh; Rajesh Kulshreshtha; Asha Mathur
2000-03-01
Japanese encephalitis virus (JEV) induces human peripheral blood monocytes to secrete a chemotactic cytokine [human macrophage-derived factor (hMDF)] which causes chemotaxis of neutrophils. The only known assay for hMDF cannot quantify its level in samples, so an enzyme immunoassay has been standardized for detection of hMDF and hMDF-specific antibodies in test samples. The reported enzyme linked immunosorbent assay (ELISA) was found to be sensitive (89%), specific (91%), accurate (92·2%) and reproducible and was able to detect a minimum concentration of 23 ng hMDF/ml in test samples. The chemotactic factor could be detected in JEV inoculated mouse sera and JEV infected culture fluids. Significant finding of the test was the detection of hMDF in sera of human cases of JE.
International Nuclear Information System (INIS)
A potent chemotactic peptide, formyl-norleucyl-leucyl-phenylalanyl-norleucyl-tyrosyl-lysine was derivatized by reaction with N-succinimidyl 4-fluorobenzoate. This derivatized peptide bound to human polymorphonuclear leukocytes in vitro and exhibited biological activity in a superoxide production assay. Peptide labeling using N-succinimidyl 4-[18F]fluorobenzoate was accomplished in reasonable yields with 10-15 mCi of labeled peptide available per 100 Ci of [18F]fluoride. With the exception of the gastrointestinal tract, clearance of activity from tissues following injection of this peptide in normal mice was rapid. Although preliminary in nature, these results suggest that 18F-labeled chemotactic peptides should be investigated as potential agents for positron emission tomographic imaging of bacterial infections
VanEpps, D E; Tung, K S
1977-09-01
Fucose-binding L. tetragonolobus lectin to the surface of human polymorphonuclear leukocytes (PMN) and induces a chemotactic response. Both surface binding and chemotaxis are inhibited by free fucose but not by fructose, mannose, or galactose. The lectin-binding sites on PMN are unrelated to the A, B, or O blood group antigen. Utilization of this lectin should be a useful tool in isolating PMN membrane components and in analyzing the mechanism of neutrophil chemotaxis. PMID:330752
Park, Choon Sik; Cho, Seung Woo; Lee, Sei Young; Park, Tae Eung; Jeong, Seung Whan; Lee, Sang Moo; Kim, Hyeon Tae; Uh, Sootaek; Kim, Young Hoon
1995-01-01
Objectives To elucidate the presence of neutrophil chemotactic factor (NCF) and characterize them in the bronchial trees of symptomatic patients with bronchial asthma. Methods Bronchoalveolar lavage (BAL) fluids were concentrated by ultrafiltration. Differential counts of BAL cells was performed upto 500 cells on the cytocentrifuge-prepared slides. NCF activities in concentrated BAL fluids were measured by using microchemotactic chamber. These NCF activities were characterized by heat-stabili...
Málaga Iguiñiz, Carlos; Minzoni, Antonmaria Alessio; Plaza, Ramón Gabriel; Simeoni, Chiara
2013-01-01
International audience This paper studies a two-dimensional chemotactic model for two species in which one of them produces a chemo-repellent for the other. It is shown asymptotically and numerically how the chemical inhibits the invasion of a moving front for the second species and how stable steady states, which depend on the chemical concentration, can be reached. The results qualitatively explain experimental observations by Swain and Ray (Microbiol. Res. 164(2), 2009), where colonies ...
Chemotactic model for interaction of antagonistic microflora colonies and numerical simulations
Malaga, Carlos; Plaza, Ramon G; Simeoni, Chiara
2011-01-01
This paper studies a two-dimensional chemotactic model for two species in which one of them produces a chemo-repellent for the other. Under these circumstances, the chemical inhibits the invasion of a moving front for the second species. It is shown asymptotically and numerically how stable steady states, which depend on the chemical concentration, can be reached. The results qualitatively explain experimental observations by Swain and Ray, where colonies of bacteria produce metabolite agents which prevent the invasion of fungi.
Sandeep Bisht; Piyush Pandey; Anchal Sood; Shivesh Sharma; Bisht, N. S.
2010-01-01
Several naphthalene and anthracene degrading bacteria were isolated from rhizosphere of Populus deltoides, which were growing in non-contaminated soil. Among these, four isolates, i.e. Kurthia sp., Micrococcus varians, Deinococcus radiodurans and Bacillus circulans utilized chrysene, benzene, toluene and xylene, in addition to anthracene and naphthalene. Kurthia sp and B. circulans showed positive chemotactic response for naphthalene and anthracene. The mean growth rate constant (K) of isolat...
Bacteria are not too small for spatial sensing of chemical gradients: An experimental evidence
DEFF Research Database (Denmark)
Thar, Roland; Kühl, Michael
2003-01-01
By analyzing the chemotactic behavior of a recently described marine bacterial species, we provide experimental evidence that bacteria are not too small for sensing chemical gradients spatially. The bipolar flagellated vibrioid bacteria (typical size 2 × 6 µm) exhibit a unique motility pattern as...... oxygen concentration is rotating faster than the other bundle. A mathematical model based on these assumptions reproduces the observed swimming behavior of the bacteria....
Emergent Collective Chemotaxis without Single-Cell Gradient Sensing
Camley, Brian A.; Zimmermann, Juliane; Levine, Herbert; Rappel, Wouter-Jan
2016-03-01
Many eukaryotic cells chemotax, sensing and following chemical gradients. However, experiments show that even under conditions when single cells cannot chemotax, small clusters may still follow a gradient. This behavior is observed in neural crest cells, in lymphocytes, and during border cell migration in Drosophila, but its origin remains puzzling. Here, we propose a new mechanism underlying this "collective guidance," and study a model based on this mechanism both analytically and computationally. Our approach posits that contact inhibition of locomotion, where cells polarize away from cell-cell contact, is regulated by the chemoattractant. Individual cells must measure the mean attractant value, but need not measure its gradient, to give rise to directional motility for a cell cluster. We present analytic formulas for how the cluster velocity and chemotactic index depend on the number and organization of cells in the cluster. The presence of strong orientation effects provides a simple test for our theory of collective guidance.
On a competitive system under chemotactic effects with non-local terms
International Nuclear Information System (INIS)
In this paper, we study a system of partial differential equations describing the evolution of a population under chemotactic effects with non-local reaction terms. We consider an external application of chemoattractant in the system and study the cases of one and two populations in competition. By introducing global competitive/cooperative factors in terms of the total mass of the populations, we obtain, for a range of parameters, that any solution with positive and bounded initial data converges to a spatially homogeneous state with positive components. The proofs rely on the maximum principle for spatially homogeneous sub- and super-solutions. (paper)
Modeling of chemotactic steering of bacteria-based microrobot using a population-scale approach.
Cho, Sunghoon; Choi, Young Jin; Zheng, Shaohui; Han, Jiwon; Ko, Seong Young; Park, Jong-Oh; Park, Sukho
2015-09-01
The bacteria-based microrobot (Bacteriobot) is one of the most effective vehicles for drug delivery systems. The bacteriobot consists of a microbead containing therapeutic drugs and bacteria as a sensor and an actuator that can target and guide the bacteriobot to its destination. Many researchers are developing bacteria-based microrobots and establishing the model. In spite of these efforts, a motility model for bacteriobots steered by chemotaxis remains elusive. Because bacterial movement is random and should be described using a stochastic model, bacterial response to the chemo-attractant is difficult to anticipate. In this research, we used a population-scale approach to overcome the main obstacle to the stochastic motion of single bacterium. Also known as Keller-Segel's equation in chemotaxis research, the population-scale approach is not new. It is a well-designed model derived from transport theory and adaptable to any chemotaxis experiment. In addition, we have considered the self-propelled Brownian motion of the bacteriobot in order to represent its stochastic properties. From this perspective, we have proposed a new numerical modelling method combining chemotaxis and Brownian motion to create a bacteriobot model steered by chemotaxis. To obtain modeling parameters, we executed motility analyses of microbeads and bacteriobots without chemotactic steering as well as chemotactic steering analysis of the bacteriobots. The resulting proposed model shows sound agreement with experimental data with a confidence level <0.01. PMID:26487902
Institute of Scientific and Technical Information of China (English)
HOU Li; LIU Qi; JIAO Yu-lian; ZHANG Jie; WANG Lai-cheng; MA Chun-yan; CUI Bin; ZHANG Xue; ZHAO Yue-ran
2006-01-01
Objective: To obtain recombinant human CCL21 with biological activity from eukaryotic expression system for further use in cancer gene therapy. Methods: A fragment of human CCL21 gene was obtained from pSK-hCCL21 plasmid digested by Xho I and BamH I, inserted into the responding sites of eukaryotic expression vector pVAX1, and then transfected into COS-7 cells by electroporation method. The expression of hCCL21 protein was detected by western blotting analysis. The in vitro chemotaxis assay was used to test the chemotactic function of the expression product to lymphocytes. Results: Human CCL21 protein was expressed by transfected COS-7 cells with recombinant plasmid containing hCCL21 gene, and was verified by western blotting. The in vitro chemotaxis assay demonstrated that human CCL21 protein had a potent chemotactic function to lymphocytes. Conclusion: Human CCL21 was successfully and transiently expressed in eukaryotic cells, which lays some foundation for the study of CCL21 gene therapy in murine tumor models.
Energy Technology Data Exchange (ETDEWEB)
Lopez de Victoria, G. (Puerto Rico Univ., Rio Piedras (Puerto Rico). Dept. of Biology)
1989-02-01
The chemotactic behavior of deep terrestrial subsurface bacteria toward amino acids, carbohydrates and trichloroethylene was assayed using a modification of the capillary method and bacterial enumeration by acridine orange direct counts. Eleven isolates of bacteria isolated from six different geological formations were investigated. A bimodal response rather than an absolute positive or negative response was observed in most assays. Most of the isolates were positively chemotactic to low concentrations of substrates and were repelled by high concentrations of the same substrate. However, this was not the case for trichloroethylene (TCE) which was mostly an attractant and elicited the highest responses in all the isolates when compared with amino acids and carbohydrates. The movement rates of these isolates in aseptic subsurface sediments in the absence and presence of TCE were also determined using a laboratory model. All of the isolates showed distinct response range, peak, and threshold concentrations when exposed to the same substrates suggesting that they are possibly different species as has been inferred from DNA homology studies. 101 refs., 4 figs., 57 tabs.
Effect of Monocyte Chemotactic Protein-1 on the Intraperitoneal Adhesion Formation
Institute of Scientific and Technical Information of China (English)
无
2000-01-01
In order to study the role of monocyte chemotactic protein-1 (MCP-1) in the intra-peritoneal adhesion formation, 23 infertile patients undergoing laparoscopic operation were divided into two groups: experimental group including 12 patients with intra-peritoneal adhesion and control group including 11 patients without intra-peritoneal adhesion. Peritoneal fluid (PF) and peritoneum were collected from these patients during laparoscopic examination. The expression levels of MCP-l protein and MCP-1 mRNA were detected by using enzyme-linked immunosorbent assay (ELISA) and dot blot analysis method respectively. It was found that the levels of MCP-1 protein in PF of the patients with peritoneal adhesion were significantly higher than in the control group (0. 44±0.11 ng/ml vs 0. 19+0. 09 ng/ml respectively, P＜0. 01 ). The level of MCP-1 mRNA in the peritoneum of the patients with peritoneal adhesion was significantly higher than in the control group (48.61±3.72 vs 19. 87±2.54 respectively, P＜0. 01). It was suggested that MCP-1 might play a role in the adhesion formation, and chemotactic cytokines expressing in the peritoneal mesothelial cells might be take part in the process.
On gradient field theories: gradient magnetostatics and gradient elasticity
Lazar, Markus
2014-01-01
In this work the fundamentals of gradient field theories are presented and reviewed. In particular, the theories of gradient magnetostatics and gradient elasticity are investigated and compared. For gradient magnetostatics, non-singular expressions for the magnetic vector gauge potential, the Biot-Savart law, the Lorentz force and the mutual interaction energy of two electric current loops are derived and discussed. For gradient elasticity, non-singular forms of all dislocation key-formulas (...
Indian Academy of Sciences (India)
Ira N Feit; Jeffrey Pawlikowski; Caroline Zawilski
2007-03-01
The three basic cell types in the migrating slug of Dictyostelium discoideum show differential chemotactic response to cyclic AMP (cAMP) and differential sensitivity to suppression of the chemotaxis by ammonia. The values of these parameters indicate a progressive maturation of chemotactic properties during the transdifferentiation of slug cell types. We present a model that explains the localization of the three cell types within the slug based on these chemotactic differences and on the maturation of their chemotactic properties.
Emergent collective chemotaxis without single-cell gradient sensing
Camley, Brian A; Levine, Herbert; Rappel, Wouter-Jan
2015-01-01
Many eukaryotic cells chemotax, sensing and following chemical gradients. However, even if single cells do not chemotax significantly, small clusters may still follow a gradient; this behavior is observed in neural crest cells and during border cell migration in Drosophila, but its origin remains puzzling. Here, we study this "collective guidance" analytically and computationally. We show collective chemotaxis can exist without single-cell chemotaxis if contact inhibition of locomotion (CIL), where cells polarize away from cell-cell contact, is regulated by the chemoattractant. We present explicit formulas for how cluster velocity and chemotactic index depend on the number and organization of cells in the cluster. Pairs of cells will have velocities that are strongly dependent on the cell pair's orientation: this provides a simple test for the presence of collective guidance in neural crest cells and other systems. We also study cluster-level adaptation, amplification, and cohesion via co-attraction.
How many consumer levels can survive in a chemotactic food chain?
Institute of Scientific and Technical Information of China (English)
Jing LIU; Chunhua OU
2009-01-01
We investigate the effect and the impact of predator-prey interactions, diffusivity and chemotaxis on the ability of survival of multiple consumer levels in a predator-prey microbial food chain. We aim at answering the question of how many consumer levels can survive from a dynamical system point of view. To solve this standing issue on food-chain length, first we construct a chemotactic food chain model. A priori bounds of the steady state populations are obtained. Then under certain sufficient conditions combining the effect of conversion efficiency, diffusivity and chemotaxis parameters, we derive the co-survival of all consumer levels, thus obtaining the food chain length of our model. Numerical simulations not only confirm our theoretical results, but also demonstrate the impact of conversion efficiency, diffusivity and chemotaxis behavior on the survival and stability of various consumer levels.
Directory of Open Access Journals (Sweden)
Sandeep Bisht
2010-12-01
Full Text Available Several naphthalene and anthracene degrading bacteria were isolated from rhizosphere of Populus deltoides, which were growing in non-contaminated soil. Among these, four isolates, i.e. Kurthia sp., Micrococcus varians, Deinococcus radiodurans and Bacillus circulans utilized chrysene, benzene, toluene and xylene, in addition to anthracene and naphthalene. Kurthia sp and B. circulans showed positive chemotactic response for naphthalene and anthracene. The mean growth rate constant (K of isolates were found to increase with successive increase in substrate concentration (0.5 to 1.0 mg/50ml. B. circulans SBA12 and Kurthia SBA4 degraded 87.5% and 86.6% of anthracene while, Kurthia sp. SBA4, B. circulans SBA12, and M. varians SBA8 degraded 85.3 %, 95.8 % and 86.8 % of naphthalene respectively after 6 days of incubation as determined by HPLC analysis.
International Nuclear Information System (INIS)
Four DTPA-derivatized chemotactic peptide analogs: ForNleLFNleYK-DTPA (P1), ForMLFNH(CH2)6NH-DTPA (P2), ForNleLFK(NH2)-DTPA (P3), and ForNleLFK-DTPA (P4), were synthesized and evaluated for in vitro bioactivity and receptor binding. The peptides were radiolabeled with 111In by transchelation and their biodistribution determined in rats at 5, 30, 60 and 120 min after injection. Localization at sites of infection was determined by scintillation camera imaging in animals with deep-thigh infection due to Escherichia coli. Images were recorded from 5 min to 2 hr after injection. All peptides maintained biologic activity (EC50 for O2-production by human PMN's: 3-150 nM) and the ability to bind to the oligopeptide chemoattractant receptor on human PMN's (EC50 for binding: 7.5-50 nM); biologic activity and receptor binding were highly correlated (r = 0.99). For all the peptides, blood clearance was rapid (half-lives: 21.5, 33.1, 31.6, and 28.7 min for P1, P2, P3, and P4, respectively). Biodistributions of the individual peptides were similar with low levels of accumulation in the heart, lung, liver, spleen, and gastrointestinal tract. In the kidney, P1 had much greater accumulation than other organs. All peptides yielded high quality images of the infection sites within 1 hr of injection. This study demonstrates that 111In-labeled chemotactic peptide analogs were effective agents for the external imaging of focal sites of infection
Sharma, Rati; Roberts, Elijah
2016-06-01
Many vital eukaryotic cellular functions require the cell to respond to a directional gradient of a signaling molecule. The first two steps in any eukaryotic chemotactic/chemotropic pathway are gradient detection and cell polarization. Like many processes, such chemotactic and chemotropic decisions are made using a relatively small number of molecules and are thus susceptible to internal and external fluctuations during signal transduction. Large cell-to-cell variations in the magnitude and direction of a response are therefore possible and do, in fact, occur in natural systems. In this work we use three-dimensional probabilistic modeling of a simple gradient sensing pathway to study the capacity for individual cells to accurately determine the direction of a gradient, despite fluctuations. We include a stochastic external gradient in our simulations using a novel gradient boundary condition modeling a point emitter a short distance away. We compare and contrast three different variants of the pathway, one monostable and two bistable. The simulation data show that an architecture combining bistability with spatial positive feedback permits the cell to both accurately detect and internally amplify an external gradient. We observe strong polarization in all individual cells, but in a distribution of directions centered on the gradient. Polarization accuracy in our study was strongly dependent upon a spatial positive feedback term that allows the pathway to trade accuracy for polarization strength. Finally, we show that additional feedback links providing information about the gradient to multiple levels in the pathway can help the cell to refine initial inaccuracy in the polarization direction.
Direct and indirect radioiodination of protein: comparative study of chemotactic peptide labeling
International Nuclear Information System (INIS)
The development of simple methods for protein radioiodination have stimulated the use of radioiodinated peptides in vivo. There are two basic methods for labeling proteins with radioiodine: direct labeling, reaction of an electrophilic radioiodine with functional activated groups on protein, like the phenol ring in the tyrosine residue, and the conjugation of a previously radioiodinated molecule to the protein, referred as indirect method. The great problem related to the direct radioiodination of proteins is the in vivo dehalogenation. This problem can be minimized if a non-phenolic prosthetic group is used in the indirect radioiodination of the peptide. The ATE prosthetic group, N-succinimidyl 3-(tri-n-butylstannyl) benzoate, when radioiodinated by electrophilic iododestannilation produces N-succinimidyl 3-[123l/131l] iodine benzoate (SIB) that is subsequently conjugated to the protein by the acylation of the lysine group. There are many radiopharmaceuticals employed in scintigraphic images of infection and inflammation used with some limitations. These limitations stimulated the improvement of a new class of radiopharmaceuticals, the receptor-specific related labeled peptides, as the mediators of the inflammatory response, that presents high affinity by receptors expressed in the inflammation process, and fast clearance from blood and non-target tissues. One of these molecules is the synthetic chemotactic peptide fNleLFNIeYK that presents potent chemotaxis for leukocytes, with high affinity by the receptors presented in polymorphonuclear leukocytes and mononuclear phagocytes. The objective of this work included the synthesis of ATE prosthetic group and comparative radioiodination of the chemotactic peptide fNleLFNIeYK by direct and indirect methods, with radiochemical purity determination and evaluation of in vivo and in vitro stability of the compounds. This work presented an original contribution in the comparative biological distribution studies of the
International Nuclear Information System (INIS)
Childhood chronic neutropenia with decreased numbers of chemotactic factor receptors as well as defective chemotaxis was first demonstrated in an 8-month-old girl. Chemotactic factor receptors on neutrophils were assayed using tritiated N-formyl-methionyl-leucyl-phenylalanine (3H-FMLP). The patient's neutrophils had decreased numbers of the receptors: numbers of the receptors were 20,000 (less than 3 SD) as compared with those of control cells of 52,000 +/- 6000 (mean +/- SD) (n = 10). The neutropenia disappeared spontaneously by 28 months of age parallel with the improvement of chemotaxis and increase in numbers of chemotactic factor receptors. These results demonstrate a transient decrease of neutrophil chemotactic factor receptors as one of the pathophysiological bases of a transient defect of neutrophil chemotaxis in this disorder
Wang, Hong; Zhang, Qiongwen; Kong, Hongyu; Zeng, Yunhui; Hao, Meiqin; Yu, Ting; Peng, Jing; Xu, Zhao; Chen, Jingquan; Shi, Huashan
2014-01-01
Purpose: A great deal of studies have been performed on the prognostic value of monocyte chemotactic protein-1 (MCP-1) in solid tumors in recent years. However, no consistent outcomes are reported. Therefore, the prognostic value of MCP-1 still remains controversial in patients with solid tumors. Here we aimed to evaluate the prognostic value of MCP-1 expression for patients with solid tumors. Methods: Comprehensive literature was selected from PUBMED and EMBASE and clinical studies which rep...
Giverso, Chiara; Verani, Marco; Ciarletta, Pasquale
2016-06-01
Biological experiments performed on living bacterial colonies have demonstrated the microbial capability to develop finger-like shapes and highly irregular contours, even starting from an homogeneous inoculum. In this work, we study from the continuum mechanics viewpoint the emergence of such branched morphologies in an initially circular colony expanding on the top of a Petri dish coated with agar. The bacterial colony expansion, based on either a source term, representing volumetric mitotic processes, or a nonconvective mass flux, describing chemotactic expansion, is modeled at the continuum scale. We demonstrate that the front of the colony is always linearly unstable, having similar dispersion curves to the ones characterizing branching instabilities. We also perform finite element simulations, which not only prove the emergence of branching, but also highlight dramatic differences between the two mechanisms of colony expansion in the nonlinear regime. Furthermore, the proposed combination of analytical and numerical analysis allowed studying the influence of different model parameters on the selection of specific patterns. A very good agreement has been found between the resulting simulations and the typical structures observed in biological assays. Finally, this work provides a new interpretation of the emergence of branched patterns in living aggregates, depicted as the results of a complex interplay among chemical, mechanical and size effects. PMID:26296713
International Nuclear Information System (INIS)
Genes induced or suppressed by oxidized low-density lipoproteins (oxLDL) in human monocytic THP-1 cells were searched using the differential display reverse transcriptase polymerase chain reaction. One of the differentially expressed (up-regulated) cDNA fragments was found to contain sequences corresponding to monocyte chemotactic protein-3 (MCP-3). The stimulatory effect of the oxLDL on the expression of MCP-3 mRNA was both time- and dose-dependent. Treatment with GF109203X and genistein, inhibitors of protein kinase C and tyrosine kinase, respectively, had no effect on the induction of MCP-3 mRNA by oxLDL, while treatment with cycloheximide inhibited the induction. The induction was reproduced by the lipid components in oxLDL such as 9-HODE and 13-HODE, which are known to activate the peroxisome proliferator-activated receptor γ (PPARγ). Introduction of an endogenous PPARγ ligand, 15d-PGJ2, in the culture of THP-1 cells resulted in the induction of MCP-3 gene expression. Furthermore, analyses of human atherosclerotic plaques revealed that the expressional pattern of MCP-3 in the regions of neointimal and necrotic core overlapped with that of PPARγ. These results suggest that oxLDL delivers its signal for MCP-3 expression via PPARγ, which may be further related to the atherogenesis
Hein, R; Mauch, C; Hatamochi, A; Krieg, T
1988-07-15
Following chronic administration of corticosteroids in vivo, a number of complications occur, which mainly involve the metabolism of connective tissue cells. Therefore, several attempts have been made to develop corticosteroids, which show less pronounced side effects. Fibroblasts were kept in monolayer cultures and were exposed to corticosteroids demonstrating similar anti-inflammatory activity (prednicarbate, desoximetasone). Chemotaxis of fibroblasts was studied over 4 hr, protein and collagen synthesis were estimated using proteinchemical methods and also by dot blot hybridization. Corticosteroids used in a high dosage (10 microM) affected all biosynthetic capacities of the investigated fibroblasts. Protein synthesis and production of collagen types I and III were reduced and a similar decrease of mRNA levels for collagen type I could be found indicating an influence on the pretranslational control. In the same concentrations desoximetasone was much more active than prednicarbate. Fibroblast migration was dosage dependently inhibited from 10(-9) M to 10(-5) M for desoximetasone, while incubation with prednicarbate did not cause a reduction of the chemotactic response at concentrations lower than 10(-7) M. These data suggest that modifications of corticosteroids might result in a dissociation of some of their biological activities and can specifically influence their effects on biosynthetic capacities of fibroblasts. PMID:3395353
Enterohepatic circulation of bacterial chemotactic peptide in rats with experimental colitis
International Nuclear Information System (INIS)
The association of hepatobiliary disorders with colonic inflammation is well recognized. Although the pathophysiology is obscure, increased permeation of toxic bacterial products across the inflamed gut to the portal circulation might be one mechanism. Potentially toxic metabolites include N-formylated chemotactic peptides that are produced by several species of intestinal bacteria and can be detected in colonic fluid in vivo. To investigate the metabolic fate of one of these low molecular weight proinflammatory peptides, N-formyl L-methionine L-leucine 125I-L-tyrosine was introduced into colon loops of healthy rats (n = 10) and rats with experimental colitis (n = 15) induced by rectal instillation of 15% (vol/vol) acetic acid. Gut, liver, and blood radioactivity were monitored by external gamma-counting and radioactivity in bile was measured by biliary catheter drainage into a well counter. Bile was processed by high-performance liquid chromatography to determine the amount of intact, bioactive peptide excreted over 3 h. After colonic instillation of 1 nmol of peptide, the mean (+/- SEM) biliary excretion of intact peptide was 6.4 +/- 2.0 pmol in normal rats and 49.0 +/- 20 pmol in rats with colitis (p less than 0.01). An enterohepatic circulation of synthetic N-formyl L-methionine L-leucine L-tyrosine has been demonstrated in the rat. Experimental colitis was associated with an eightfold increase in biliary excretion of this proinflammatory bacterial peptide. Proinflammatory bacterial peptides synthesized by colonic bacteria could be important in the pathophysiology of colon inflammation and its frequently associated hepatobiliary complications
Moreira, Leandro Marcio; Facincani, Agda Paula; Ferreira, Cristiano Barbalho; Ferreira, Rafael Marine; Ferro, Maria Inês Tiraboshi; Gozzo, Fabio Cesar; de Oliveira, Julio Cezar Franco; Ferro, Jesus Aparecido; Soares, Márcia Regina
2015-03-01
The genome of Xanthomonas citri subsp. Citri strain 306 pathotype A (Xac) was completely sequenced more than 10 years; to date, few studies involving functional genomics Xac and its host compatible have been developed, specially related to adaptive events that allow the survival of Xac within the plant. Proteomic analysis of Xac showed that the processes of chemotactic signal transduction and phosphate metabolism are key adaptive strategies during the interaction of a pathogenic bacterium with its plant host. The results also indicate the importance of a group of proteins that may not be directly related to the classical virulence factors, but that are likely fundamental to the success of the initial stages of the infection, such as methyl-accepting chemotaxis protein (Mcp) and phosphate specific transport (Pst). Furthermore, the analysis of the mutant of the gene pstB which codifies to an ABC phosphate transporter subunit revealed a complete absence of citrus canker symptoms when inoculated in compatible hosts. We also conducted an in silico analysis which established the possible network of genes regulated by two-component systems PhoPQ and PhoBR (related to phosphate metabolism), and possible transcriptional factor binding site (TFBS) motifs of regulatory proteins PhoB and PhoP, detaching high degree of conservation of PhoB TFBS in 84 genes of Xac genome. This is the first time that chemotaxis signal transduction and phosphate metabolism were therefore indicated to be fundamental to the process of colonization of plant tissue during the induction of disease associated with Xanthomonas genus bacteria. PMID:25403594
Functional characterization of ferret CCL20 and CCR6 and identification of chemotactic inhibitors.
Qin, Shulin; Klamar, Cynthia R; Fallert Junecko, Beth A; Craigo, Jodi; Fuller, Deborah H; Reinhart, Todd A
2013-03-01
CCL20 is currently the only known chemokine ligand for the receptor CCR6, and is a mucosal chemokine involved in normal and pathological immune responses. Although nucleotide sequence data are available for ccl20 and ccr6 sequences from multiple species, the ferret ccl20 and ccr6 sequences have not been determined. To increase our understanding of immune function in ferret models of infection and vaccination, we have used RT-PCR to obtain the ferret ccl20 and ccr6 cDNA sequences and functionally characterize the encoded proteins. The open reading frames of both genes were highly conserved across species and mostly closely related to canine sequences. For functional analyses, single cell clones expressing ferret CCR6 were generated, a ferret CCL20/mouse IgG(2a) fusion protein (fCCL20-mIgG(2a)) was produced, and fCCL20 was chemically synthesized. Cell clones expressing ferret CCR6 responded chemotactically to fCCL20-mIgG2a fusion protein and synthetic ferret CCL20. Chemotaxis inhibition studies identified the polyphenol epigallocatechin-3-gallate and the murine γ-herpesvirus 68 M3 protein as inhibitors of fCCL20. Surface plasmon resonance studies revealed that EGCG bound directly to fCCL20. These results provide molecular characterization of previously unreported ferret immune gene sequences and for the first time identify a broad-spectrum small molecule inhibitor of CCL20 and reveal CCL20 as a target for the herpesviral M3 protein. PMID:23360828
Directory of Open Access Journals (Sweden)
Cheng-Yuk Lee
Full Text Available Coccidioides spp. are dimorphic pathogenic fungi whose parasitic forms cause coccidioidomycosis (Valley fever in mammalian hosts. We use an innovative interdisciplinary approach to analyze one-on-one encounters between human neutrophils and two forms of Coccidioides posadasii. To examine the mechanisms by which the innate immune system coordinates different stages of the host response to fungal pathogens, we dissect the immune-cell response into chemotaxis, adhesion, and phagocytosis. Our single-cell technique reveals a surprisingly strong response by initially quiescent neutrophils to close encounters with C. posadasii, both from a distance (by complement-mediated chemotaxis as well as upon contact (by serum-dependent adhesion and phagocytosis. This response closely resembles neutrophil interactions with Candida albicans and zymosan particles, and is significantly stronger than the neutrophil responses to Cryptococcus neoformans, Aspergillus fumigatus, and Rhizopus oryzae under identical conditions. The vigorous in vitro neutrophil response suggests that C. posadasii evades in vivo recognition by neutrophils through suppression of long-range mobilization and recruitment of the immune cells. This observation elucidates an important paradigm of the recognition of microbes, i.e., that intact immunotaxis comprises an intricate spatiotemporal hierarchy of distinct chemotactic processes. Moreover, in contrast to earlier reports, human neutrophils exhibit vigorous chemotaxis toward, and frustrated phagocytosis of, the large spherules of C. posadasii under physiological-like conditions. Finally, neutrophils from healthy donors and patients with chronic coccidioidomycosis display subtle differences in their responses to antibody-coated beads, even though the patient cells appear to interact normally with C. posadasii endospores.
Energy Technology Data Exchange (ETDEWEB)
Korchak, H.M.; Vosshall, L.B.; Lundquist, K.F.
1987-05-01
Neutrophils activated by ligands such as the chemotactic peptide f-Met-Leu-Phe (FMLP) generate superoxide anion (O/sub 2//sup -/) and release specific and azurophil granule contents. The signalling for this response is thought to involve both elevated cytosolic Ca and protein kinase C activity. Receptor-occupation triggers a phospholipase C to cleave phosphatidyl inositol 4,5 bisphosphate (PIP/sub 2/) yielding inositol 1,4,5 trisphosphate, (IP/sub 3/), a trigger for intracellular Ca release, and diacyl glycerol (DG), which together with Ca activates protein kinase C. The DG can be metabolized to phosphatidic acid (PA). FMLP triggered a rapid increase in cytosolic Ca (fura-2). Loading cells with MAPTAM, and intracellular Ca buffer, suppressed this Ca transient in FMLP activated cells and inhibited O/sub 2//sup -/ generation to 12.5% of control, beta-glucuronidase release to 40.3% of control and lysozyme release to 55.1% of control. FMLP triggered a prompt decrease in PIP/sub 2/ in cells pre-labelled with /sup 32/P or /sup 3/H-inositol and an increase in PA and release of /sup 3/H-IP/sub 3/. A rapid increase in /sup 14/C-DG levels was also observed in /sup 14/C-glycerol pre-loaded cells activated by FMLP. Suppression of the Ca transient by buffering with MAPTAM inhibited elevation of /sup 14/C-DG. Breakdown of PIP/sub 2/ was not inhibited and elevation of /sup 32/P-PA was enhanced in MAPTAM loaded cells. Conversely, 200nM ionomycin which elevated cytosolic Ca to an equivalent level to 10/sup -7/M FMLP, triggered a rise in /sup 14/C-DG but not in PA.
International Nuclear Information System (INIS)
The mechanism of amplification of the splenic macrophages' population was investigated using mice infected with malaria as a model of an obligate intravascular infection. It was observed that these macrophages derived from blood monocytes rather than by local proliferation in the spleen. A factor, chemotactic for blood mononuclear cells, was present in spleen cells shortly after infection and preceded detectable increases in spleen macrophage number by 48 hours. This factor, in concert with spleen derived macrophage migration inhibition factor, may be important in the amplification of splenic macrophage population in intravascular infections
Gupta Sood, Sushma
2003-08-01
The chemotactic responses of the plant-growth-promoting rhizobacteria Azotobacter chroococcum and Pseudomonas fluorescens to roots of vesicular-arbuscular mycorrhizal (Glomus fasciculatum) tomato plants were determined. A significantly (P=0.05) greater number of bacterial cells of wild strains were attracted towards vesicular-arbuscular mycorrhizal tomato roots compared to non-vesicular-arbuscular mycorrhizal tomato roots. Substances exuded by roots served as chemoattractants for these bacteria. P. fluorescens was strongly attracted towards citric and malic acids, which were predominant constituents in root exudates of tomato plants. A. chroococcum showed a stronger response towards sugars than amino acids, but the response was weakest towards organic acids. The effects of temperature, pH, and soil water matric potential on bacterial chemotaxis towards roots were also investigated. In general, significantly (P=0.05) greater chemotactic responses of bacteria were observed at higher water matric potentials (0, -1, and -5 kPa), slightly acidic to neutral pH (6, 6.5 and 7), and at 20-30 degrees C (depending on the bacterium) than in other environmental conditions. It is suggested that chemotaxis of P. fluorescens and A. chroococcum towards roots and their exudates is one of the several steps in the interaction process between bacteria and vesicular-arbuscular mycorrhizal roots. PMID:19719591
Vongsak, Boonyadist; Gritsanapan, Wandee; Wongkrajang, Yuvadee; Jantan, Ibrahim
2013-11-01
The ethanol extract of Moringa oleifera Lam. leaves and its major constituents, crypto-chlorogenic acid, quercetin 3-O-glucoside and kaempferol 3-O-glucoside, were investigated on the respiratory burst of human whole blood and isolated human polymorphonuclear leukocytes (PMNs) using a luminol-based chemiluminescence assay. The chemotactic migration of PMNs was also investigated using the Boyden chamber technique. The ethanol extract demonstrated inhibitory activities on the oxidative burst and the chemotactic migration of PMNs. Quercetin 3-O-glucoside, crypto-chlorogenic acid, and kaempferol 3-O-glucoside, isolated from the extract, expressed relatively strong inhibitory activity on the oxidative burst of PMNs with IC50 values of 4.1, 6.7 and 7.0 microM, respectively, comparable with that of aspirin. They also demonstrated strong inhibition of chemotatic migration of PMNs with IC50 values of 9.5, 15.9 and 18.2 microM, respectively. The results suggest that M. oleifera leaves could modulate the immune response of human phagocytes, linking to its ethnopharmacological use as an anti-inflammatory agent. The immunomodulating activity of the plant was mainly due to its major components. PMID:24427941
Institute of Scientific and Technical Information of China (English)
Kang Soo Lee; Ji Hyung Chung; Kyung Hye Lee; Min-Jeong Shin; Byoung Hoon Oh; Soo Hyung Lee; Chang Hyung Hong
2009-01-01
A number of studies have investigated peripheral inflammatory indices, including plasma cytokines and related molecules according to subtypes of dementia, but not in mild cognitive impairment (MCI). In this study, we used multiplex cytokine assay to assess the plasma levels of 22 cytokines in patients with MCI subtyped as amnestic and non-amnestic, according to cognitive features. When comparing the levels of plasma growth factors, chemokines and cytokines, plasma levels of monocyte chemotactic protein 3 (MCP-3), and beta-nerve growth factor (β-NGF) in these two groups, they were found to be significantly higher in amnestic MCI patients than in non-amnestic MCI patients, after adjusting for age and gender. This suggests that plasma MCP-3 and β-NGF may be useful in differentiating subtypes of MCI. Cellular & Molecular Immunology.
Alber, M; Glimm, T; Lushnikov, P M; Alber, Mark; Chen, Nan; Glimm, Tilmann; Lushnikov, Pavel M.
2006-01-01
The Cellular Potts Model (CPM) has been used for simulating various biological phenomena such as differential adhesion, fruiting body formation of the slime mold Dictyostelium discoideum, angiogenesis, cancer invasion, chondrogenesis in embryonic vertebrate limbs, and many others. In this paper, we derive continuous limit of discrete one dimensional CPM with the chemotactic interactions between cells in the form of a Fokker-Planck equation for the evolution of the cell probability density function. This equation is then reduced to the classical macroscopic Keller-Segel model. In particular, all coefficients of the Keller-Segel model are obtained from parameters of the CPM. Theoretical results are verified numerically by comparing Monte Carlo simulations for the CPM with numerics for the Keller-Segel model.
Larsen, Christopher P; Beggs, Marjorie L; Wilson, Jon D; Lathrop, Sarah L
2016-06-01
Leukocyte chemotactic factor 2 (LECT2) amyloidosis is one of the most recently described types of amyloidosis. Since its description, it has been found to be one the most common types of amyloidosis in large series of amyloid cases involving the kidney and liver in the United States, where it primarily affects patients of Hispanic ethnicity. We sought to investigate the prevalence of this disease among Hispanic adult decedents who had an autopsy performed at the New Mexico Office of the Medical Investigator and determine the organ distribution of amyloid deposition. LECT2 amyloid deposits were identified within the kidney in 3.1% of Hispanic decedents. It was consistently deposited in the liver, spleen, adrenals, and lungs but did not involve the myocardium or brain. LECT2 amyloidosis is likely not rare among Hispanics in the Southwest United States and could represent an important but under-recognized etiology of chronic kidney disease in this population. PMID:26912093
Directory of Open Access Journals (Sweden)
Farman Ullah Dawar
2016-08-01
Full Text Available Fish skin mucus is a dynamic barrier for invading pathogens with a variety of anti-microbial enzymes, including cyclophilin A (CypA, a multi-functional protein with peptidyl-prolyl cis/trans isomerase (PPIase activity. Beside various other immunological functions, CypA induces leucocytes migration in vitro in teleost. In the current study, we have discovered several novel immune-relevant proteins in yellow catfish skin mucus by mass spectrometry (MS. The CypA present among them was further detected by Western blot. Moreover, the CypA present in the skin mucus displayed strong chemotactic activity for yellow catfish leucocytes. Interestingly, asparagine (like arginine in mammals at position 69 was the critical site in yellow catfish CypA involved in leucocyte attraction. These novel efforts do not only highlight the enzymatic texture of skin mucus, but signify CypA to be targeted for anti-inflammatory therapeutics.
Directory of Open Access Journals (Sweden)
J. Grzegorczyk
2000-01-01
Full Text Available The goal of our study was to assess the chemotactic activity for eosinophils (ECA and neutrophils (NCA and histamine releasing activity (HRA in crude supernatants of mononuclear cells in monosensitized atopic asthmatics and healthy controls. Chemotactic activity for ECA and neutrophils was measured in supernatants of cultured mononuclear cells with modified Boyden’s chamber and HRA was assessed on healthy donor basophils. With respect to ECA generation two distinct subgroups of subjects were distinguished: releasers [ECA (+] and non-releasers [ECA (–]. In atopic and non-atopic ECA (+ the mean ECA index was 3.78 ± 0.49 and 2.47 ± 0.27 respectively (P > 0.05. Supernatants from the remaining subjects (seven of 22 atopic and five of 11 non-atopic did not express ECA, but revealed significant inhibitory activity for chemokinesis of eosinophils (mean chemotactic index 0.25 ± 0.16 and 0.48 ± 0.22 for atopic and non-atopic non-releasers respectively. Stimulation with antigen of MNC from atopic and with PHA from non-atopic ECA (– restored cells ability to release ECA. Sephadex gel chromatography revealed that supernatants of MNC contained chemotactic and chemokinesis inhibitory activity in different fractions. The spontaneous productions of NCA and HRA by mononuclear cells was sim ilar in ECA releasers and non-releasers, although the HRA was higher following stimulation with PHA in the non-atopic ECA (+ subgroup. Our study demonstrated, for the first time, that MNC are capable of generating not only chemotactic activity but also chemokinesis inhibitory activity for eosinophils.
Laser textured surface gradients
Ta, Van Duong; Dunn, Andrew; Wasley, Thomas J.; Li, Ji; Kay, Robert W.; Stringer, Jonathan; Smith, Patrick J.; Esenturk, Emre; Connaughton, Colm; Shephard, Jonathan D.
2016-05-01
This work demonstrates a novel technique for fabricating surfaces with roughness and wettability gradients and their subsequent applications for chemical sensors. Surface roughness gradients on brass sheets are obtained directly by nanosecond laser texturing. When these structured surfaces are exposed to air, their wettability decreases with time (up to 20 days) achieving both spatial and temporal wettability gradients. The surfaces are responsive to organic solvents. Contact angles of a series of dilute isopropanol solutions decay exponentially with concentration. In particular, a fall of 132° in contact angle is observed on a surface gradient, one order of magnitude higher than the 14° observed for the unprocessed surface, when the isopropanol concentration increased from 0 to 15.6 wt%. As the wettability changes gradually over the surface, contact angle also changes correspondingly. This effect offers multi-sensitivity at different zones on the surface and is useful for accurate measurement of chemical concentration.
Quaternion Gradient and Hessian
Xu, Dongpo; Mandic, Danilo P.
2014-01-01
The optimization of real scalar functions of quaternion variables, such as the mean square error or array output power, underpins many practical applications. Solutions often require the calculation of the gradient and Hessian, however, real functions of quaternion variables are essentially non-analytic. To address this issue, we propose new definitions of quaternion gradient and Hessian, based on the novel generalized HR (GHR) calculus, thus making possible efficient derivation of optimizati...
Gradient Particle Magnetohydrodynamics
Maron, Jason L.; Howes, Gregory G.
2001-01-01
We introduce Gradient Particle Magnetohydrodynamics (GPM), a new Lagrangian method for magnetohydrodynamics based on gradients corrected for the locally disordered particle distribution. The development of a numerical code for MHD simulation using the GPM algorithm is outlined. Validation tests simulating linear and nonlinear sound waves, linear MHD waves, advection of magnetic fields in a magnetized vortex, hydrodynamical shocks, and three-dimensional collapse are presented, demonstrating th...
High Gradient Accelerator Research
Energy Technology Data Exchange (ETDEWEB)
Temkin, Richard [Massachusetts Inst. of Technology (MIT), Cambridge, MA (United States). Dept. of Physics. Plasma Science and Fusion Center
2016-07-12
The goal of the MIT program of research on high gradient acceleration is the development of advanced acceleration concepts that lead to a practical and affordable next generation linear collider at the TeV energy level. Other applications, which are more near-term, include accelerators for materials processing; medicine; defense; mining; security; and inspection. The specific goals of the MIT program are: • Pioneering theoretical research on advanced structures for high gradient acceleration, including photonic structures and metamaterial structures; evaluation of the wakefields in these advanced structures • Experimental research to demonstrate the properties of advanced structures both in low-power microwave cold test and high-power, high-gradient test at megawatt power levels • Experimental research on microwave breakdown at high gradient including studies of breakdown phenomena induced by RF electric fields and RF magnetic fields; development of new diagnostics of the breakdown process • Theoretical research on the physics and engineering features of RF vacuum breakdown • Maintaining and improving the Haimson / MIT 17 GHz accelerator, the highest frequency operational accelerator in the world, a unique facility for accelerator research • Providing the Haimson / MIT 17 GHz accelerator facility as a facility for outside users • Active participation in the US DOE program of High Gradient Collaboration, including joint work with SLAC and with Los Alamos National Laboratory; participation of MIT students in research at the national laboratories • Training the next generation of Ph. D. students in the field of accelerator physics.
A hybrid computational model to predict chemotactic guidance of growth cones
Roccasalvo, Iolanda Morana; Micera, Silvestro; Sergi, Pier Nicola
2015-06-01
The overall strategy used by growing axons to find their correct paths during the nervous system development is not yet completely understood. Indeed, some emergent and counterintuitive phenomena were recently described during axon pathfinding in presence of chemical gradients. Here, a novel computational model is presented together with its ability to reproduce both regular and counterintuitive axonal behaviours. In this model, the key role of intracellular calcium was phenomenologically modelled through a non standard Gierer-Meinhardt system, as a crucial factor influencing the growth cone behaviour both in regular and complex conditions. This model was able to explicitly reproduce neuritic paths accounting for the complex interplay between extracellular and intracellular environments, through the sensing capability of the growth cone. The reliability of this approach was proven by using quantitative metrics, numerically supporting the similarity between in silico and biological results in regular conditions (control and attraction). Finally, the model was able to qualitatively predict emergent and counterintuitive phenomena resulting from complex boundary conditions.
Stepanenko, Svetlana; Engels, Bernd
2007-01-30
This paper presents a modification of the tabu search called gradient tabu search (GTS). It uses analytical gradients for a fast minimization to the next local minimum and analytical diagonal elements of the Hessian to escape local minima. For an efficient blocking of already visited areas tabu regions and tabu directions are introduced into the tabu list (TL). Trials with various well-known test functions indicate that the GTS is a very promising approach to determine local and global minima of differentiable functions. Possible application areas could be optimization routines for force field parameters or conformational searches for large molecules. PMID:17186482
High gradient superconducting quadrupoles
International Nuclear Information System (INIS)
Prototype superconducting quadrupoles with a 5 cm aperture and gradient of 16 kG/cm have been built and tested as candidate magnets for the final focus at SLC. The magnets are made from NbTi Tevatron style cable with 10 inner and 14 outer turns per quadrant. Quench performance and multipole data are presented. Design and data for a low current, high gradient quadrupole, similar in cross section but wound with a cable consisting of five insulated conductors are also discussed
Gu, Naibing; Kang, Guannan; Jin, Chang'E; Xu, Yongjian; ZHANG, ZHENXIANG; Erle, David J.; Zhen, Guohua
2009-01-01
Asthma is characterized by airway inflammation, mucus overproduction, airway hyperreactivity, and peribronchial fibrosis. Intelectin has been shown to be increased in airway epithelium of asthmatics. However, the role of intelectin in the pathogenesis of asthma is unknown. Airway epithelial cells can secrete chemokines such as monocyte chemotactic protein (MCP)-1 and -3 that play crucial roles in asthmatic airway inflammation. We hypothesized that intelectin plays a role in allergic airway in...
Takashiba, S; Takigawa, M; Takahashi, K; Myokai, F; Nishimura, F.; Chihara, T.; Kurihara, H.; Nomura, Y.; Murayama, Y.
1992-01-01
Inflammatory mediators produced by cells in the gingiva have been implicated in the initiation and progression of periodontal disease, a common infectious disease. In this study, we examined the biological activity of neutrophil chemotactic factors and the kinetics of expression of interleukin-8 (IL-8) mRNA derived from normal gingival fibroblasts in response to inflammatory mediators in an in vitro model. Gingival fibroblasts stimulated by either recombinant human interleukin-1 beta or recom...
Gaze, Eric C.
2005-01-01
We introduce a cooperative learning, group lab for a Calculus III course to facilitate comprehension of the gradient vector and directional derivative concepts. The lab is a hands-on experience allowing students to manipulate a tangent plane and empirically measure the effect of partial derivatives on the direction of optimal ascent. (Contains 7…
Bonfield, Tracey L; John, Nejimol; Malur, Anagha; Barna, Barbara P; Culver, Daniel A; Kavuru, Mani S; Thomassen, Mary Jane
2005-01-01
Pulmonary alveolar proteinosis (PAP) is a rare autoimmune lung disease characterized by abnormal surfactant accumulation within alveolar macrophages, and circulating auto-antibodies against granulocyte-macrophage colony stimulating factor (GM-CSF) resulting in functional GM-CSF deficiency. Monocyte/macrophage chemotactic protein-1 (MCP-1) is elevated in PAP, suggesting association with the pathophysiology. Because PAP has been associated with inflammatory pulmonary changes, we hypothesized that other MCP family chemokines would be present and that Chemokine Chemotaxis Receptor 2 (CCR2) would be elevated on PAP mononuclear cells. Here we show for the first time that MCP-2 and MCP-3, like MCP-1, are highly elevated in PAP. We also confirm that PAP alveolar macrophages and not epithelial cells produce MCP-1, and that MCP-1 from PAP lung has functional chemoattractant activity. Surprisingly, CCR2 expression is diminished in PAP lymphocytes and alveolar macrophages compared to controls. Further, MCP-1 from PAP lung suppresses CCR2 expression in vitro, suggesting that in PAP, MCP-1 participates in an autocrine regulatory network in vivo. PMID:15596412
Jantan, Ibrahim; Harun, Nurul Hikmah; Septama, Abdi Wira; Murad, Shahnaz; Mesaik, M A
2011-04-01
The methanol extracts of 20 selected medicinal plants were investigated for their effects on the respiratory burst of human whole blood, isolated human polymorphonuclear leukocytes (PMNs) and isolated mice macrophages using a luminol/lucigenin-based chemiluminescence assay. We also tested the effect of the extracts on chemotactic migration of PMNs using the Boyden chamber technique. The extracts of Curcuma domestica L., Phyllanthus amarus Schum & Thonn and C. xanthorrhiza Roxb. were the samples producing the strongest oxidative burst of PMNs with luminol-based chemiluminescence, with IC(50) values ranging from 0.5 to 0.7 μg/ml. For macrophage cells, the extracts which showed strong suppressive activity for luminol-based chemiluminescence were C. xanthorrhiza and Garcinia mangostana L. Among the extracts studied, C. mangga Valton & Vazsjip, Piper nigrum L. and Labisia pumila var. alata showed strong inhibitory activity on lucigenin-amplified oxidative burst of PMNs, with IC(50) values ranging from 0.9 to 1.5 μg/ml. The extracts of Zingiber officinale Rosc., Alpinia galangal (L.) Willd and Averrhoa bilimbi Linn showed strong inhibition on the chemotaxic migration of cells, with IC(50) values comparable to that of ibuprofen (1.5 μg/ml). The results suggest that some of these plants were able to modulate the innate immune response of phagocytes at different steps, emphasizing their potential as a source of new immunomodulatory agents. PMID:21184195
International Nuclear Information System (INIS)
The biochemistry and subcellular source of new formyl peptide chemotactic receptor appearing at the human neutrophil and differentiated HL-60 (d-HL-60) cell surface after stimulation with phorbol myristate acetate (PMA) were examined. Formyl peptide receptor was analyzed by affinity labeling with formyl-norleu-leu-phe-norleu- [125I]iodotyr-lys and ethylene glycol bis(succinimidyl succinate) followed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and densitometric analysis of autoradiographs. PMA, a specific granule secretagogue, increases affinity labeling of formyl peptide receptors on the neutrophil surface by 100%, and on d-HL-60, which lack specific granule markers, by 20%. Papain treatment markedly reduces surface labeling of formyl peptide receptor in both neutrophils and d-HL-60, and results in the appearance of a lower m.w. membrane-bound receptor fragment. PMA stimulation of papain-treated cells increases uncleaved surface receptor on neutrophils by 400%, and on D-HL-60 by only 45%. This newly appearing receptor is the same apparent m.w. (55,000 to 75,000 for neutrophils; 62,000 to 80,000 for d-HL-60) and yields the same papain cleavage product as receptor on the surface of unstimulated cells. These observations suggest that specific granule membranes contain large amounts of formyl peptide receptor, which is biochemically identical to that found on the cell surface and can be mobilized to the cell surface with appropriate stimulation
Directory of Open Access Journals (Sweden)
Toni Valković
2016-01-01
Full Text Available The aim of this pilot study was to determine the plasma levels of monocyte chemotactic protein-1 (MCP-1 and possible associations with angiogenesis and the main clinical features of untreated patients with multiple myeloma (MM. ELISA was used to determine plasma MCP-1 levels in 45 newly diagnosed MM patients and 24 healthy controls. The blood vessels were highlighted by immunohistochemical staining, and computer-assisted image analysis was used for more objective and accurate determination of two parameters of angiogenesis: microvessel density (MVD and total vascular area (TVA. The plasma levels of MCP-1 were compared to these parameters and the presence of anemia, renal dysfunction, and bone lesions. A significant positive correlation was found between plasma MCP-1 concentrations and TVA (p=0.02. The MCP-1 levels were significantly higher in MM patients with evident bone lesions (p=0.01, renal dysfunction (p=0.02, or anemia (p=0.04. Therefore, our preliminary results found a positive association between plasma MCP-1 levels, angiogenesis (expressed as TVA, and clinical features in patients with MM. However, additional prospective studies with a respectable number of patients should be performed to authenticate these results and establish MCP-1 as a possible target of active treatment.
Beygelzimer, Alina; Hazan, Elad; Kale, Satyen; Luo, Haipeng
2015-01-01
We extend the theory of boosting for regression problems to the online learning setting. Generalizing from the batch setting for boosting, the notion of a weak learning algorithm is modeled as an online learning algorithm with linear loss functions that competes with a base class of regression functions, while a strong learning algorithm is an online learning algorithm with convex loss functions that competes with a larger class of regression functions. Our main result is an online gradient b...
Gradient structures in hardmetals
International Nuclear Information System (INIS)
Functionally graded materials enable combinations of properties like hardness and toughness that can not be achieved with homogeneous materials. The formation of gradients in tungsten carbides correlates with the migration of binder which is caused by differences in the composition of the green body, gas-phase treatment during sintering or the mean particle size and particle-size distribution of the hard phase. In order to examine the gradient formation fracture bars were made of differently fine-grained WC powders and variable additions of Co and carbon black. Beside homogeneous samples two-layer samples were manufactured by step-wise pressing of powders with different composition and/or grain size. The densification behavior of the green bodies and the magnetic and mechanical properties of the sintered compacts were measured. On two-layer samples with full density the concentration profiles of Co, C and W was determined parallel to the pressing direction over the entire sample height (≤ 10 mm) by ESMA. Additionally, hardness and fracture toughness were measured along this line. Differences in cobalt contents are rapidly homogenized in liquid-phase sintering. But large Co gradients can be generated by differences in particle sizes of the hard phase, the non-metal content (carbon, oxygen) and impurities in the ppm range (influence of the wetting and solubility conditions). After sintering the binder content of the finer grained layer is generally higher than in the coarser layer independent of the starting composition. In two-layer samples Co gradients up to 10 mm in thickness and hardness differences to 500 units (HV10) could be produced. (author)
Fixed field alternating gradient
Machida, Shinji
2013-01-01
The concept of a fixed field alternating gradient (FFAG) accelerator was invented in the 1950s. Although many studies were carried out up to the late 1960s, there has been relatively little progress until recently, when it received widespread attention as a type of accelerator suitable for very fast acceleration and for generating high-power beams. In this paper, we describe the principles and design procedure of a FFAG accelerator.
Vranjes, J.; Kono, M
2015-01-01
Inhomogeneous plasmas and fluids contain energy stored in inhomogeneity and they naturally tend to relax into lower energy states by developing instabilities or by diffusion. But the actual amount of energy in such inhomogeneities has remained unknown. In the present work the amount of energy stored in a density gradient is calculated for several specific density profiles in a cylindric configuration. This is of practical importance for drift wave instability in various plasmas, and in partic...
Czech Academy of Sciences Publication Activity Database
Segeth, Karel
Liberec : Technická univerzita v Liberci, 2006, s. 335-341. ISBN 80-7372-055-8. [International Conference Presentation of Mathematics ICPM ´05. Liberec (CZ), 20.09.2005-23.09.2005] R&D Projects: GA ČR(CZ) GA201/04/1503 Institutional research plan: CEZ:AV0Z10190503 Keywords : linear algebraic system * conjugate gradient method * preconditioning Subject RIV: BA - General Mathematics
Directory of Open Access Journals (Sweden)
Kohei Shobayashi
Full Text Available To evaluate the postoperative changes in blebs and levels of aqueous monocyte chemotactic protein-1 (MCP-1 after trabeculectomy vs. Ex-PRESS tube shunt surgery.Rabbits were subjected to trabeculectomy or Ex-PRESS tube shunt surgery and observed for up to 3 months. Intraocular pressure (IOP was measured using a rebound tonometer. The MCP-1 level was measured by enzyme-linked immunosorbent assay (ELISA. Bleb morphology was evaluated using photos and anterior-segment optical coherence tomography (OCT.There were no differences in bleb appearance or IOP at any time between the groups. Bleb wall density in the anterior-segment OCT image was significantly lower 1 week after surgery in the Ex-PRESS group than the trabeculectomy group. The MCP-1 level in control eyes was 304.1 ± 45.2 pg/mL. In the trabeculectomy group, the mean aqueous MCP-1 level was 1444.9, 1914.3, 1899.8, 516.4, 398.3, 427.3, 609.5, 1612.7, 386.2, and 167.9 pg/mL at 3, 6, and 12 h, and 1, 2, 5, 7, 14, 30, and 90 days after surgery, respectively. In the Ex-PRESS group, the corresponding values were 1744.0, 1372.0, 932.5, 711.7, 396.1, 487.3, 799.5, 1327.9, 293.6, and 184.0 pg/mL. There were no significant differences in the aqueous MCP-1 level between the groups at any time point.The postoperative changes were similar in the Ex-PRESS and trabeculectomy groups, except for bleb wall density in the anterior-segment OCT image. The postoperative aqueous MCP-1 level had bimodal peaks in both groups.
Generalized quasi Yamabe gradient solitons
Neto, Benedito Leandro; de Oliveira, Hudson Pina
2016-01-01
We prove that a nontrivial complete generalized quasi Yamabe gradient soliton (M; g) must be a quasi Yamabe gradient soliton on each connected component of M and that a nontrivial complete locally conformally at generalized quasi Yamabe gradient soliton has a special warped product structure.
Nonlinear Conjugate Gradient Methods
Czech Academy of Sciences Publication Activity Database
Lukšan, Ladislav; Vlček, Jan
Praha: Matematický ústav AV ČR, v.v.i, 2015 - (Chleboun, J.; Přikryl, P.; Segeth, K.; Šístek, J.; Vejchodský, T.), s. 130-135 ISBN 978-80-85823-64-6. [Programs and Algorithms of Numerical Mathematics /17./. Dolní Maxov (CZ), 08.06.2014-13.06.2014] Institutional support: RVO:67985807 Keywords : minimization * nonlinear conjugate gradient methods * comparison of methods * efficiency of methods Subject RIV: BA - General Mathematics http://dml.cz/handle/10338.dmlcz/702674
Roberts, Christian K; Won, Dean; Pruthi, Sandeep; Kurtovic, Silvia; Sindhu, Ram K; Vaziri, Nosratola D; Barnard, R James
2006-05-01
The present study was designed to examine the effects of lifestyle modification on key contributing factors to atherogenesis, including oxidative stress, inflammation, chemotaxis, and cell adhesion. Obese men (n = 31), 15 of whom had metabolic syndrome, were placed on a high-fiber, low-fat diet in a 3-wk residential program where food was provided ad libitum and daily aerobic exercise was performed. In each subject, pre- and postintervention fasting blood was drawn for circulating levels of serum lipids, glucose and insulin (for estimation of insulin sensitivity), oxidative stress-generating enzyme myeloperoxidase and marker 8-isoprostaglandin F2alpha, the inflammatory protein C-reactive protein, soluble ICAM-1 as an indicator of endothelial activation, sP-selectin as a marker of platelet activation, the chemokine macrophage inflammatory protein-1alpha, and total matrix metalloproteinase-9. Using subject sera and human aortic endothelial cell culture systems, we measured VCAM-1 cell surface abundance and monocyte chemotactic protein-1, nitric oxide, superoxide, and hydrogen peroxide production in vitro by fluorometric detection. Also determined in vitro was serum-induced, monocyte adhesion and monocyte chemotactic activity. After 3 wk, significant reductions (P fasting glucose, insulin, homeostasis model assessment for insulin resistance, myeloperoxidase, 8-isoprostaglandin F2alpha, C-reactive protein, soluble ICAM-1, soluble P-selectin, macrophage inflammatory protein-1alpha, and matrix metalloproteinase-9 were noted. In vitro, serum-stimulated cellular VCAM-1 expression, monocyte chemotactic protein-1 production, and fluorometric detection of superoxide and hydrogen peroxide production decreased, whereas a concomitant increase in NO production was noted (all P < 0.01). Additionally, both monocyte adhesion (P < 0.05) and MCA (P < 0.01) decreased. Nine of 15 were no longer positive for metabolic syndrome postintervention. Intensive lifestyle modification may
Generalized conjugate gradient squared
Energy Technology Data Exchange (ETDEWEB)
Fokkema, D.R.; Sleijpen, G.L.G. [Utrecht Univ. (Netherlands)
1994-12-31
In order to solve non-symmetric linear systems of equations, the Conjugate Gradient Squared (CGS) is a well-known and widely used iterative method. In practice the method converges fast, often twice as fast as the Bi-Conjugate Gradient method. This is what you may expect, since CGS uses the square of the BiCG polynomial. However, CGS may suffer from its erratic convergence behavior. The method may diverge or the approximate solution may be inaccurate. BiCGSTAB uses the BiCG polynomial and a product of linear factors in an attempt to smoothen the convergence. In many cases, this has proven to be very effective. Unfortunately, the convergence of BiCGSTAB may stall when a linear factor (nearly) degenerates. BiCGstab({ell}) is designed to overcome this degeneration of linear factors. It generalizes BiCGSTAB and uses both the BiCG polynomial and a product of higher order factors. Still, CGS may converge faster than BiCGSTAB or BiCGstab({ell}). So instead of using a product of linear or higher order factors, it may be worthwhile to look for other polynomials. Since the BiCG polynomial is based on a three term recursion, a natural choice would be a polynomial based on another three term recursion. Possibly, a suitable choice of recursion coefficients would result in method that converges faster or as fast as CGS, but less erratic. It turns out that an algorithm for such a method can easily be formulated. One particular choice for the recursion coefficients leads to CGS. Therefore one could call this algorithm generalized CGS. Another choice for the recursion coefficients leads to BiCGSTAB. It is therefore possible to mix linear factors and some polynomial based on a three term recursion. This way one may get the best of both worlds. The authors will report on their findings.
Rigidity of gradient Ricci Solitons
Petersen, Peter; Wylie, William
2007-01-01
We define a gradient Ricci soliton to be rigid if it is a flat bundle $% N\\times_{\\Gamma}\\mathbb{R}^{k}$ where $N$ is Einstein. It is known that not all gradient solitons are rigid. Here we offer several natural conditions on the curvature that characterize rigid gradient solitons. Other related results on rigidity of Ricci solitons are also explained in the last section.
Gradient boosting machines, a tutorial.
Natekin, Alexey; Knoll, Alois
2013-01-01
Gradient boosting machines are a family of powerful machine-learning techniques that have shown considerable success in a wide range of practical applications. They are highly customizable to the particular needs of the application, like being learned with respect to different loss functions. This article gives a tutorial introduction into the methodology of gradient boosting methods with a strong focus on machine learning aspects of modeling. A theoretical information is complemented with descriptive examples and illustrations which cover all the stages of the gradient boosting model design. Considerations on handling the model complexity are discussed. Three practical examples of gradient boosting applications are presented and comprehensively analyzed. PMID:24409142
Gradient Boosting Machines, A Tutorial
Directory of Open Access Journals (Sweden)
Alexey eNatekin
2013-12-01
Full Text Available Gradient boosting machines are a family of powerful machine-learning techniques that have shown considerable success in a wide range of practical applications. They are highly customizable to the particular needs of the application, like being learned with respect to different loss functions. This article gives a tutorial introduction into the methodology of gradient boosting methods. A theoretical information is complemented with many descriptive examples and illustrations which cover all the stages of the gradient boosting model design. Considerations on handling the model complexity are discussed. A set of practical examples of gradient boosting applications are presented and comprehensively analyzed.
Denaturing gradient gel electrophoresis
International Nuclear Information System (INIS)
It is worthwhile considering that only some 30 species make up the bulk of the bacterial population in human faeces at any one time based on the classical cultivation-based approach. The situation in the rumen is similar. Thus, it is practical to focus on specific groups of interest within the complex community. These may be the predominant or the most active species, specific physiological groups or readily identifiable (genetic) clusters of phylogenetically related organisms. Several 16S rDNA fingerprinting techniques can be invaluable for selecting and monitoring sequences or phylogenetic groups of interest and are described below. Over the past few decades, considerable attention was focussed on the identification of pure cultures of microbes on the basis of genetic polymorphisms of DNA encoding rRNA such as ribotyping, amplified fragment length polymorphism and randomly amplified polymorphic DNA. However, many of these methods require prior cultivation and are less suitable for use in analysis of complex mixed populations although important in describing cultivated microbial diversity in molecular terms. Much less attention was given to molecular characterization of complex communities. In particular, research into diversity and community structure over time has been revolutionized by the advent of molecular fingerprinting techniques for complex communities. Denaturing or temperature gradient gel electrophoresis (DGGE/TGGE) methods have been successfully applied to the analysis of human, pig, cattle, dog and rodent intestinal populations
Electric field gradients in metals
International Nuclear Information System (INIS)
A review of the recent works on electric field gradient in metals is given. The main emphasis is put on the temperature dependence of the electric field gradient in nonmagnetic metals. Some methods of investigation of this effect using nuclear probes are described. One of them is nuclear accoustic resonance method. (S.B.)
Computational Strain Gradient Crystal Plasticity
DEFF Research Database (Denmark)
Niordson, Christian Frithiof; Kysar, Jeffrey W.
2011-01-01
A model for strain gradient crystal visco-plasticity is formulated along the lines proposed by Fleck andWillis (2009) for isotropic plasticity. Size-effects are included in the model due to the addition of gradient terms in both the free energy as well as through a dissipation potential. A finite...
Combining Step Gradients and Linear Gradients in Density.
Kumar, Ashok A; Walz, Jenna A; Gonidec, Mathieu; Mace, Charles R; Whitesides, George M
2015-06-16
Combining aqueous multiphase systems (AMPS) and magnetic levitation (MagLev) provides a method to produce hybrid gradients in apparent density. AMPS—solutions of different polymers, salts, or surfactants that spontaneously separate into immiscible but predominantly aqueous phases—offer thermodynamically stable steps in density that can be tuned by the concentration of solutes. MagLev—the levitation of diamagnetic objects in a paramagnetic fluid within a magnetic field gradient—can be arranged to provide a near-linear gradient in effective density where the height of a levitating object above the surface of the magnet corresponds to its density; the strength of the gradient in effective density can be tuned by the choice of paramagnetic salt and its concentrations and by the strength and gradient in the magnetic field. Including paramagnetic salts (e.g., MnSO4 or MnCl2) in AMPS, and placing them in a magnetic field gradient, enables their use as media for MagLev. The potential to create large steps in density with AMPS allows separations of objects across a range of densities. The gradients produced by MagLev provide resolution over a continuous range of densities. By combining these approaches, mixtures of objects with large differences in density can be separated and analyzed simultaneously. Using MagLev to add an effective gradient in density also enables tuning the range of densities captured at an interface of an AMPS by simply changing the position of the container in the magnetic field. Further, by creating AMPS in which phases have different concentrations of paramagnetic ions, the phases can provide different resolutions in density. These results suggest that combining steps in density with gradients in density can enable new classes of separations based on density. PMID:25978093
DEFF Research Database (Denmark)
Koenigs, Volker; Jennings, Richard; Vogl, Thomas;
2014-01-01
RhoA is thought to be essential for coordination of the membrane protrusions and retractions required for immune cell motility and directed migration. Whether the subfamily of Rho (Ras homolog) GTPases (RhoA, RhoB and RhoC) is actually required for the directed migration of primary cells is...... dKO cells, which developed extremely elongated tails. Surprisingly, velocity (of the cell body) was increased, while chemotactic efficiency was preserved, compared to wild-type (WT) macrophages. Randomly migrating RhoA/RhoB dKO macrophages exhibited multiple small protrusions and developed large...... involved in pulling up the rear end and resorbing lamellipodial membrane protrusions. Macrophages lacking Rho proteins migrate faster in vitro, which, in the case of the peritoneum, translates to more rapid in vivo monocyte/macrophage recruitment....
Spatial gradient tuning in metamaterials
Driscoll, Tom; Goldflam, Michael; Jokerst, Nan; Basov, Dimitri; Smith, David
2011-03-01
Gradient Index (GRIN) metamaterials have been used to create devices inspired by, but often surpassing the potential of, conventional GRIN optics. The unit-cell nature of metamaterials presents the opportunity to exert much greater control over spatial gradients than is possible in natural materials. This is true not only during the design phase but also offers the potential for real-time reconfiguration of the metamaterial gradient. This ability fits nicely into the picture of transformation-optics, in which spatial gradients can enable an impressive suite of innovative devices. We discuss methods to exert control over metamaterial response, focusing on our recent demonstrations using Vanadium Dioxide. We give special attention to role of memristance and mem-capacitance observed in Vanadium Dioxide, which simplify the demands of stimuli and addressing, as well as intersecting metamaterials with the field of memory-materials.
Flame Propagation Through Concentration Gradient
Institute of Scientific and Technical Information of China (English)
JunyaIINO; MitsuakiTANABE; 等
2000-01-01
The experiment was carried out in homogeneous propane-air mixture and in several concentration gradient of mixture.Igniter is put on the upper side of the combustion chamber,In concentration gradient experiment.ixture was ignited from lean side.An experimental study was conducted in a combustion chamber.The combustion chamber has glass windows for optical measurements at any side.For the measurement of distribution of fuel concentration,infraed absorption method using 3.39μm He-Ne laser was used,and for the observation of proagating flams,Schlieren method was employed.As a measurment result of flame propagation velocity and flammable limit,for a mixture of an identical local equivalence ratio.flame propagation velocity in concentration gradient is faster than that in homogeneous mixture,and rich flammable limit in concentration gradient shows a tendency to be higher than that in homogeneous mixture.
Sobolev gradients and differential equations
Neuberger, John William
1997-01-01
A Sobolev gradient of a real-valued functional is a gradient of that functional taken relative to the underlying Sobolev norm. This book shows how descent methods using such gradients allow a unified treatment of a wide variety of problems in differential equations. Equal emphasis is placed on numerical and theoretical matters. Several concrete applications are made to illustrate the method. These applications include (1) Ginzburg-Landau functionals of superconductivity, (2) problems of transonic flow in which type depends locally on nonlinearities, and (3) minimal surface problems. Sobolev gradient constructions rely on a study of orthogonal projections onto graphs of closed densely defined linear transformations from one Hilbert space to another. These developments use work of Weyl, von Neumann and Beurling.
Gradient boosting machines, a tutorial
Natekin, Alexey; Knoll, Alois
2013-01-01
Gradient boosting machines are a family of powerful machine-learning techniques that have shown considerable success in a wide range of practical applications. They are highly customizable to the particular needs of the application, like being learned with respect to different loss functions. This article gives a tutorial introduction into the methodology of gradient boosting methods with a strong focus on machine learning aspects of modeling. A theoretical information is complemented with de...
Gradient Boosting Machines, A Tutorial
Alexey Natekin; Alois Knoll
2013-01-01
Gradient boosting machines are a family of powerful machine-learning techniques that have shown considerable success in a wide range of practical applications. They are highly customizable to the particular needs of the application, like being learned with respect to different loss functions. This article gives a tutorial introduction into the methodology of gradient boosting methods. A theoretical information is complemented with many descriptive examples and illustrations which cover all th...
The influence of ALN-Al gradient material gradient index on ballistic performance
International Nuclear Information System (INIS)
Ballistic performance of the gradient material is superior to laminated material, and gradient materials have different gradient types. Using ls-dyna to simulate the ballistic performance of ALN-AL gradient target plates which contain three gradient index (b = 1, b = 0.5, b = 2). Through Hopkinson bar numerical simulation to the target plate materials, we obtained the reflection stress wave and transmission stress wave state of gradient material to get the best gradient index. The internal stress state of gradient material is simulated by amplification processing of the target plate model. When the gradient index b is equal to 1, the gradient target plate is best of all.
The influence of ALN-Al gradient material gradient index on ballistic performance
Wang, Youcong; Liu, Qiwen; Li, Yao; Shen, Qiang
2013-03-01
Ballistic performance of the gradient material is superior to laminated material, and gradient materials have different gradient types. Using ls-dyna to simulate the ballistic performance of ALN-AL gradient target plates which contain three gradient index (b = 1, b = 0.5, b = 2). Through Hopkinson bar numerical simulation to the target plate materials, we obtained the reflection stress wave and transmission stress wave state of gradient material to get the best gradient index. The internal stress state of gradient material is simulated by amplification processing of the target plate model. When the gradient index b is equal to 1, the gradient target plate is best of all.
Gradient expansion for anisotropic hydrodynamics
Florkowski, Wojciech; Spaliński, Michał
2016-01-01
We compute the gradient expansion for anisotropic hydrodynamics. The results are compared with the corresponding expansion of the underlying kinetic-theory model with the collision term treated in the relaxation time approximation. We find that a recent formulation of anisotropic hydrodynamics based on an anisotropic matching principle yields the first three terms of the gradient expansion in agreement with those obtained for the kinetic theory. This gives further support for this particular hydrodynamic model as a good approximation of the kinetic-theory approach. We further find that the gradient expansion of anisotropic hydrodynamics is an asymptotic series, and the singularities of the analytic continuation of its Borel transform indicate the presence of non-hydrodynamic modes.
Nagy, Krisztina; Sipos, Orsolya; Valkai, Sándor; Gombai, Éva; Hodula, Orsolya; Kerényi, Ádám; Ormos, Pál; Galajda, Péter
2015-07-01
Quorum sensing and chemotaxis both affect bacterial behavior on the population level. Chemotaxis shapes the spatial distribution of cells, while quorum sensing realizes a cell-density dependent gene regulation. An interesting question is if these mechanisms interact on some level: Does quorum sensing, a density dependent process, affect cell density itself via chemotaxis? Since quorum sensing often spans across species, such a feedback mechanism may also exist between multiple species. We constructed a microfluidic platform to study these questions. A flow-free, stable linear chemical gradient is formed in our device within a few minutes that makes it suitable for sensitive testing of chemoeffectors: we showed that the amino acid lysine is a weak chemoattractant for Escherichia coli, while arginine is neutral. We studied the effect of quorum sensing signal molecules of Pseudomonas aeruginosa on E. coli chemotaxis. Our results show that N-(3-oxododecanoyl)-homoserine lactone (oxo-C12-HSL) and N-(butryl)-homoserine lactone (C4-HSL) are attractants. Furthermore, we tested the chemoeffector potential of pyocyanin and pyoverdine, secondary metabolites under a quorum sensing control. Pyocyanin is proved to be a weak attractant while pyoverdine are repellent. We demonstrated the usability of the device in co-culturing experiments, where we showed that various factors released by P. aeruginosa affect the dynamic spatial rearrangement of a neighboring E. coli population, while surface adhesion of the cells is also modulated. PMID:26339306
Energy Technology Data Exchange (ETDEWEB)
Lavinas, Tatiana
2004-07-01
The development of simple methods for protein radioiodination have stimulated the use of radioiodinated peptides in vivo. There are two basic methods for labeling proteins with radioiodine: direct labeling, reaction of an electrophilic radioiodine with functional activated groups on protein, like the phenol ring in the tyrosine residue, and the conjugation of a previously radioiodinated molecule to the protein, referred as indirect method. The great problem related to the direct radioiodination of proteins is the in vivo dehalogenation. This problem can be minimized if a non-phenolic prosthetic group is used in the indirect radioiodination of the peptide. The ATE prosthetic group, N-succinimidyl 3-(tri-n-butylstannyl) benzoate, when radioiodinated by electrophilic iododestannilation produces N-succinimidyl 3-[{sup 123}l/{sup 131}l] iodine benzoate (SIB) that is subsequently conjugated to the protein by the acylation of the lysine group. There are many radiopharmaceuticals employed in scintigraphic images of infection and inflammation used with some limitations. These limitations stimulated the improvement of a new class of radiopharmaceuticals, the receptor-specific related labeled peptides, as the mediators of the inflammatory response, that presents high affinity by receptors expressed in the inflammation process, and fast clearance from blood and non-target tissues. One of these molecules is the synthetic chemotactic peptide fNleLFNIeYK that presents potent chemotaxis for leukocytes, with high affinity by the receptors presented in polymorphonuclear leukocytes and mononuclear phagocytes. The objective of this work included the synthesis of ATE prosthetic group and comparative radioiodination of the chemotactic peptide fNleLFNIeYK by direct and indirect methods, with radiochemical purity determination and evaluation of in vivo and in vitro stability of the compounds. This work presented an original contribution in the comparative biological distribution studies
On gradient Ricci solitons with Symmetry
Petersen, Peter; Wylie, William
2007-01-01
We study gradient Ricci solitons with maximal symmetry. First we show that there are no non-trivial homogeneous gradient Ricci solitons. Thus the most symmetry one can expect is an isometric cohomogeneity one group action. Many examples of cohomogeneity one gradient solitons have been constructed. However, we apply the main result in our paper "Rigidity of gradient Ricci solitons" to show that there are no noncompact cohomogeneity one shrinking gradient solitons with nonnegative curvature.
Variable metric conjugate gradient methods
Energy Technology Data Exchange (ETDEWEB)
Barth, T.; Manteuffel, T.
1994-07-01
1.1 Motivation. In this paper we present a framework that includes many well known iterative methods for the solution of nonsymmetric linear systems of equations, Ax = b. Section 2 begins with a brief review of the conjugate gradient method. Next, we describe a broader class of methods, known as projection methods, to which the conjugate gradient (CG) method and most conjugate gradient-like methods belong. The concept of a method having either a fixed or a variable metric is introduced. Methods that have a metric are referred to as either fixed or variable metric methods. Some relationships between projection methods and fixed (variable) metric methods are discussed. The main emphasis of the remainder of this paper is on variable metric methods. In Section 3 we show how the biconjugate gradient (BCG), and the quasi-minimal residual (QMR) methods fit into this framework as variable metric methods. By modifying the underlying Lanczos biorthogonalization process used in the implementation of BCG and QMR, we obtain other variable metric methods. These, we refer to as generalizations of BCG and QMR.
Hydraulic gradients in rock aquifers
International Nuclear Information System (INIS)
This report deals with fractured rock as a host for deposits of hazardous waste. In this context the rock, with its fractures containing moving groundwater, is called the geological barrier. The desired properties of the geological barrier are low permeability to water, low hydraulic gradients and ability to retain matter dissolved in the water. The hydraulic gradient together with the permeability and the porosity determines the migration velocity. Mathematical modelling of the migration involves calculation of the water flow and the hydrodynamic dispersion of the contaminant. The porous medium approach can be used to calculate mean flow velocities and hydrodynamic dispersion of a large number of fractures are connected, which means that a large volume have to be considered. It is assumed that the porous medium approach can be applied, and a number of idealized examples are shown. It is assumed that the groundwater table is replenished by percolation at a constant rate. One-dimensional analytical calculations show that zero hydraulic gradients may exist at relatively large distance from the coast. Two-dimensional numerical calculations show that it may be possible to find areas with low hydraulic gradients and flow velocities within blocks surrounded by areas with high hydraulic conductivity. (au)
Momentum expectation values : gradient terms
Plindov, G.I.; Dmitrieva, I.K.
1984-01-01
The lowest order inhomogeneity correction for the momentum expectation values, , is derived by means of Kirzhnits' gradient expansion technique. The use of the scaling allows a qualitative estimate of for the Coulomb many-body systems. A quantitative estimate of the inhomogeneity contribution to the expectation values, , for a neutral atom is made.
The geomagnetic field gradient tensor
DEFF Research Database (Denmark)
Kotsiaros, Stavros; Olsen, Nils
2012-01-01
We develop the general mathematical basis for space magnetic gradiometry in spherical coordinates. The magnetic gradient tensor is a second rank tensor consisting of 3 × 3 = 9 spatial derivatives. Since the geomagnetic field vector B is always solenoidal (∇ · B = 0) there are only eight independent...
Compositional gradients in Gramineae genes
DEFF Research Database (Denmark)
Wong, Gane Ka-Shu; Wang, Jun; Tao, Lin;
2002-01-01
In this study, we describe a property of Gramineae genes, and perhaps all monocot genes, that is not observed in eudicot genes. Along the direction of transcription, beginning at the junction of the 5'-UTR and the coding region, there are gradients in GC content, codon usage, and amino-acid usage...
International Nuclear Information System (INIS)
Quantum dots (QDs) are nano-sized semiconductors. Previously, intratracheal instillation of QD705s induces persistent inflammation in mouse lungs. In our present study, QD705-COOH and QD705-PEG activated NF-κB and increased monocyte chemotactic protein-1 (MCP-1) expression in macrophages RAW264.7 via MyD88 dependent Toll-like receptor (TLR) signaling pathways. MyD88 is an adapter protein for most TLRs to activate NF-κB. Silencing expression of MyD88 or p65 with siRNA or co-treatment with a NF-κB inhibitor tremendously abolished QD705s-induced NF-κB activity and MCP-1 expression. The involved TLRs might locate either on the cell surface or inside of cells. Co-treatment with a TLR4 inhibitor completely prevented MCP-1 induction by QD705-PEG. Nevertheless, QD705-COOH readily entered cells, and co-treatment with either inhibitors of endocytosis or intracellular TLRs prevented MCP-1 induction. These findings indicate that, depending on their surface modification, OD705s activate MyD88 dependent-TLRs at the surface or inside of the cells, which is an important mechanism for nanoparticles-induced inflammatory responses. But other MyD88-independent pathways may also involve in these responses
Barbosa-Souza, Valéria; Contin, Daniel Kiss; Filho, Waldemar Bonventi; de Araújo, Albetiza Lôbo; Irazusta, Silvia Pierre; da Cruz-Höfling, Maria Alice
2011-10-01
Osteopontin (OPN) is a chemotactic, adhesive protein whose receptors include some integrins and matrix proteins known to have role in inflammatory and repair processes. We examined the time course of OPN expression at acute and chronic stages after intramuscular injection of Bothrops lanceolatus venom in rats. Additionally, we examined the expression of CD68 (a marker for phagocytic macrophages) and the myogenic factors, myoD and myogenin. There was a biphasic upregulation of OPN (6-48 h and 3-14 days post-venom), i.e., during acute inflammation and myogenic cell proliferation and differentiation phases. OPN was detected in CD68 + macrophages, fibroblasts, normal and damaged myofibers, myoblasts and myotubes. Myogenin was expressed in the cytoplasm (atypical pattern) and nucleus of myoblasts and myotubes from 18 h to 7 days, after which it was expressed only in nuclei. Macrophage numbers, OPN and myogenin expression were still elevated at 7, 14 and 7 days. At 3 days, when OPN achieved the peak, some clusters of myoblasts were within regions of intense collagen deposition. Fibrosis may represent limitation for repairing processes and may explain the small diameter of regenerated fibers at 21 days post-venom. The expression of OPN in the course of venom-induced damage and regeneration suggests stages-specific mediation role along the whole process. PMID:21839764
Computational strain gradient crystal plasticity
DEFF Research Database (Denmark)
Niordson, Christian Frithiof; Kysar, Jeffrey W.
2014-01-01
A numerical method for viscous strain gradient crystal plasticity theory is presented, which incorporates both energetic and dissipative gradient effects. The underlying minimum principles are discussed as well as convergence properties of the proposed finite element procedure. Three problems...... of plane crystal plasticity are studied: pure shear of a single crystal between rigid platens as well as plastic deformation around cylindrical voids in hexagonal close packed and face centered cubic crystals. Effective in-plane constitutive slip parameters for plane strain deformation of specifically...... oriented face centered cubic crystals are developed in terms of the crystallographic slip parameters. The effect on geometrically necessary dislocation structures introduced by plastic deformation is investigated as a function of the ratio of void radius to plasticity length scale....
Sintered composite gradient tool materials
J. Mikuła; G. Matula; K. Gołombek; L.A. Dobrzański
2008-01-01
Purpose: Development of a new generation of the composite gradient tool materials with the core sintered withthe matrix obtained using the powder metallurgy of the chemical composition corresponding to the HS6-5-2 highspeedsteel reinforced with the WC and TiC type hard carbide phases with the growing portions of these phases inthe outward direction from the core to the surface.Design/methodology/approach: Powder Metallurgy, SEM, X-Ray Microanalysis.Findings: Powder metallurgy processes were u...
Multilayer coating for high gradients
Kubo, Takayuki
2016-01-01
The multilayer coating for high gradients is reviewed. Not only the S-I-S structure, but also the S-S bilayer structure are also treated. This is an incomplete manuscript of an invited article which will be submitted to a journal. I have uploaded this version in order to help the understanding on my talk at the TESLA Technology Collaboration meeting at Saclay, France.
Smooth Optimization with Approximate Gradient
d'Aspremont, Alexandre
2005-01-01
We show that the optimal complexity of Nesterov's smooth first-order optimization algorithm is preserved when the gradient is only computed up to a small, uniformly bounded error. In applications of this method to semidefinite programs, this means in some instances computing only a few leading eigenvalues of the current iterate instead of a full matrix exponential, which significantly reduces the method's computational cost. This also allows sparse problems to be solved efficiently using spar...
Primordial vorticity and gradient expansion
Giovannini, Massimo
2012-01-01
The evolution equations of the vorticities of the electrons, ions and photons in a pre-decoupling plasma are derived, in a fully inhomogeneous geometry, by combining the general relativistic gradient expansion and the drift approximation within the Adler-Misner-Deser decomposition. The vorticity transfer between the different species is discussed in this novel framework and a set of general conservation laws, connecting the vorticities of the three-component plasma with the magnetic field intensity, is derived. After demonstrating that a source of large-scale vorticity resides in the spatial gradients of the geometry and of the electromagnetic sources, the total vorticity is estimated to lowest order in the spatial gradients and by enforcing the validity of the momentum constraint. By acknowledging the current bounds on the tensor to scalar ratio in the (minimal) tensor extension of the $\\Lambda$CDM paradigm the maximal comoving magnetic field induced by the total vorticity turns out to be, at most, of the or...
Primordial vorticity and gradient expansion
Giovannini, Massimo; Rezaei, Zahra
2012-02-01
The evolution equations of the vorticities of the electrons, ions and photons in a pre-decoupling plasma are derived, in a fully inhomogeneous geometry, by combining the general relativistic gradient expansion and the drift approximation within the Adler-Misner-Deser decomposition. The vorticity transfer between the different species is discussed in this novel framework and a set of general conservation laws, connecting the vorticities of the three-component plasma with the magnetic field intensity, is derived. After demonstrating that a source of large-scale vorticity resides in the spatial gradients of the geometry and of the electromagnetic sources, the total vorticity is estimated to lowest order in the spatial gradients and by enforcing the validity of the momentum constraint. By acknowledging the current bounds on the tensor to scalar ratio in the (minimal) tensor extension of the ΛCDM paradigm, the maximal comoving magnetic field induced by the total vorticity turns out to be, at most, of the order of 10-37 G over the typical comoving scales ranging between 1 and 10 Mpc. While the obtained results seem to be irrelevant for seeding a reasonable galactic dynamo action, they demonstrate how the proposed fully inhomogeneous treatment can be used for the systematic scrutiny of pre-decoupling plasmas beyond the conventional perturbative expansions.
Light scattering from suspensions under external gradients
Bonet i Avalos, Josep; Rubí Capaceti, José Miguel; Rodríguez, R.; Pérez Madrid, Agustín
1990-01-01
We analyze the light-scattering spectrum of a suspension in a viscoelastic fluid under density and velocity gradients. When a density gradient is present, the dynamic structure factor exhibits universality in the sense that its expression depends only on the reduced frequency and the reduced density gradient. For a velocity gradient, however, the universality breaks down. In this last case we have found a transition point from one to three characteristic frequencies in the spectrum, which is ...
STOCHASTIC GRADIENT METHODS FOR UNCONSTRAINED OPTIMIZATION
Nataša Krejić; Nataša Krklec Jerinkić
2014-01-01
This papers presents an overview of gradient based methods for minimization of noisy functions. It is assumed that the objective functions is either given with error terms of stochastic nature or given as the mathematical expectation. Such problems arise in the context of simulation based optimization. The focus of this presentation is on the gradient based Stochastic Approximation and Sample Average Approximation methods. The concept of stochastic gradient approximation of the true gradient ...
Community and ecosystem responses to elevational gradients
DEFF Research Database (Denmark)
Sundqvist, Maja K.; Sanders, Nate; Wardle, David A.
2013-01-01
Community structure and ecosystem processes often vary along elevational gradients. Their responses to elevation are commonly driven by changes in temperature, and many community- and ecosystem-level variables therefore frequently respond similarly to elevation across contrasting gradients. There...... using elevational gradients for understanding community and ecosystem responses to global climate change at much larger spatial and temporal scales than is possible through conventional ecological experiments. However, future studies that integrate elevational gradient approaches with experimental...
On the classification of gradient Ricci solitons
Petersen, Peter; Wylie, William
2007-01-01
We show that the only complete shrinking gradient Ricci solitons with vanishing Weyl tensor are quotients of the standard ones. This gives a new proof of the Hamilton-Ivey-Perel'man classification of 3-dimensional shrinking gradient solitons. We also prove a classification for expanding gradient Ricci solitons with constant scalar curvature and suitably decaying Weyl tensor.
Second order gradient ascent pulse engineering
de Fouquieres, P; Glaser, S J; Kuprov, Ilya
2011-01-01
We report some improvements to the gradient ascent pulse engineering (GRAPE) algorithm for optimal control of quantum systems. These include more accurate gradients, convergence acceleration using the BFGS quasi-Newton algorithm as well as faster control derivative calculation algorithms. In all test systems, the wall clock time and the convergence rates show a considerable improvement over the approximate gradient ascent.
Sintered composite gradient tool materials
Directory of Open Access Journals (Sweden)
J. Mikuła
2008-07-01
Full Text Available Purpose: Development of a new generation of the composite gradient tool materials with the core sintered withthe matrix obtained using the powder metallurgy of the chemical composition corresponding to the HS6-5-2 highspeedsteel reinforced with the WC and TiC type hard carbide phases with the growing portions of these phases inthe outward direction from the core to the surface.Design/methodology/approach: Powder Metallurgy, SEM, X-Ray Microanalysis.Findings: Powder metallurgy processes were used to fabricate the proposed gradient materials, i.e., compacting inthe closed die and sintering. The method of sequential pouring of the successive portions of the powder mixes intothe die was used to ensure a high ductility of the fabricated material core with the HS6-5-2 steel matrix reinforcedwith the hard WC and TiC carbides phases, so that portions of powder with the high percentage of the hard carbidesphases would form the outer layers of the prepreg.Practical implications: Employment of powder metallurgy for fabricating the steel based tool materials givesthe possibility to preserve properties characteristic of the traditional cemented carbides and with the high ductilitycharacteristic of steel, yet better than the traditional sintered high-speed steels obtained with the ASP method.Originality/value: Providing of high properties characteristic of cemented carbides with the high ductilitycharacteristic of steel can be mostly because of the possibility of ensuring the gradients of the chemicalcomposition and properties, cutting simultaneously fabrication costs thanks to savings made on the hard carbidephase, used in the tool surface layer only.
Altitude precipitation gradient in Serbia
Directory of Open Access Journals (Sweden)
Živković Nenad M.
2004-01-01
Full Text Available Using average annual precipitations data for period 1961-90. from all rain gauges in Serbia, southern of Sava and Danube rivers, the map of altitude precipitations gradient is constructed. 59 regions homogeneous for relation X=f(H are obtained by regression analysis method (two-dimensional type, X precipitation height and H - altitude. Some new method are applied, some limitations are shown, some regularities are found in disposition of precipitation growth and it is indicated on practical application of this method in physico-geographical research.
Gradient Clogging in Depth Filtration
Datta, S.; Redner, S.
1998-01-01
We investigate clogging in depth filtration, in which a dirty fluid is ``cleaned'' by the trapping of dirt particles within the pore space during flow through a porous medium. This leads to a gradient percolation process which exhibits a power law distribution for the density of trapped particles at downstream distance x from the input. To achieve a non-pathological clogging (percolation) threshold, the system length L should scale no faster than a power of ln w, where w is the width. Non-tri...
Ting, Harold; Deep, Gagan; Kumar, Sushil; Jain, Anil K; Agarwal, Chapla; Agarwal, Rajesh
2016-06-01
Tumor microenvironment plays an essential role in prostate carcinogenesis and offers novel opportunities to prevent and treat prostate cancer (PCA). Here, we investigated the ability of cancer-associated fibroblasts (CAFs) to promote PCA progression, and silibinin efficacy to target this response. We collected conditioned media from CAFs treated with vehicle or silibinin, and labeled as control conditioned media (CCM) or silibinin-treatment conditioned media (SBCM), respectively. Next, we characterized the effect of CCM and SBCM treatment in several PCA cell lines (RWPE-1, WPE-1 NA-22, WPE-1 NB-14 and PC3). Result showed that compared with SBCM, CCM significantly reduces E-cadherin expression and increases invasiveness and clonogenicity in PCA cells. Further molecular studies identified monocyte chemotactic protein-1 (MCP-1) as the key component of CCM that promotes PCA invasiveness, whereas silibinin treatment strongly reduced MCP-1 expression in CAFs by inhibiting the DNA-binding activity of MCP-1 transcriptional regulators-nuclear factor-kappaB and AP-1. In vivo, silibinin feeding (200mg/kg body weight) strongly reduced TRAMPC1 allografts growth (by 68%) in syngeneic C57Bl/6 mice. TRAMPC1 tumor analysis showed that silibinin reduced MCP-1 and CAFs' biomarkers (fibroblast activation protein, α-smooth muscle actin, transforming growth factor beta 2, vimentin etc.) and significantly modulated the recruitment of immune cells in the tumor microenvironment. Similar inhibitory effects of silibinin on MCP-1 and immune cells recruitment were also observed in TRAMP PCA tissues with reported silibinin efficacy. Overall, our data suggest that silibinin can target CAF-mediated invasiveness in PCA by inhibiting MCP-1 secretion. This, in turn, was associated with a reduction in immune cell recruitment in vivo along with a marked reduction in tumor growth. PMID:27207648
Institute of Scientific and Technical Information of China (English)
Anatol Panasiuk; Danuta Prokopowicz; Bozena Panasiuk
2004-01-01
AIM: To explain the role of Monocyte chemotactic protein-1 (MCP-1) and soluble adhesion molecules in chronic hepatitis C during the treatment of interferon alpha (IFNα) 2 b and ribavirin (RBV).METHODS: Concentrations of MCP-1, soluble adhesion molecules intercellular adhesion molecule-1 (sICAM-1), sPselectin, interleukin (IL) 6, and IL10 in serum were estimated in the group of 40 patients with chronic hepatitis C treated with IFNalpha2 b and RBV in 0, 16, 32, 48 wk of the therapy.RESULTS: In chronic hepatitis C, before and during the treatment, the serum levels of MCP-1 and sP-selectin in responders were similar to those of healthy subjects. In nonresponders (NR), MCP-1 increased in the course of IFNα+RBV treatment, differences were statistically significant as compared to responders. MCP-1 correlated statistically with the activity of pedportal inflammation (r = 0.35, P<0.05) but not with staging of liver fibrosis. sICAM-1 positively correlated with inflammatory activity and fibrosis in NR. sP-selectin did not correlate with histological findings in the liver. The MCP-1 correlated with the soluble form of sP-selectin concentrations (r = 6, P<0.001) and with IL-10 level in NR (r = 0.4, P<0.05). There was no correlation observed between the concentration of MCP-1 and sICAM-1, IL-6 during the treatment.CONCLUSION: MCP-1 concentration may be a prognostic marker of the efficacy of IFN+RBV therapy in patients with chronic hepatitis C.
Strain gradient effects on cyclic plasticity
DEFF Research Database (Denmark)
Niordson, Christian Frithiof; Legarth, Brian Nyvang
2010-01-01
Size effects on the cyclic shear response are studied numerically using a recent higher order strain gradient visco-plasticity theory accounting for both dissipative and energetic gradient hardening. Numerical investigations of the response under cyclic pure shear and shear of a finite slab between...... rigid platens have been carried out, using the finite element method. It is shown for elastic–perfectly plastic solids how dissipative gradient effects lead to increased yield strength, whereas energetic gradient contributions lead to increased hardening as well as a Bauschinger effect. For linearly...... hardening materials it is quantified how dissipative and energetic gradient effects promote hardening above that of conventional predictions. Usually, increased hardening is attributed to energetic gradient effects, but here it is found that also dissipative gradient effects lead to additional hardening in...
Strength gradient enhances fatigue resistance of steels
Ma, Zhiwei; Liu, Jiabin; Wang, Gang; Wang, Hongtao; Wei, Yujie; Gao, Huajian
2016-02-01
Steels are heavily used in infrastructure and the transportation industry, and enhancing their fatigue resistance is a major challenge in materials engineering. In this study, by introducing a gradient microstructure into 304 austenitic steel, which is one of the most widely used types of stainless steel, we show that a strength gradient substantially enhances the fatigue life of the material. Pre-notched samples with negative strength gradients in front of the notch’s tip endure many more fatigue cycles than do samples with positive strength gradients during the crack initiation stage, and samples with either type of gradient perform better than do gradient-free samples with the same average yield strength. However, as a crack grows, samples with positive strength gradients exhibit better resistance to fatigue crack propagation than do samples with negative gradients or no gradient. This study demonstrates a simple and promising strategy for using gradient structures to enhance the fatigue resistance of materials and complements related studies of strength and ductility.
Nanofiber Scaffold Gradients for Interfacial Tissue Engineering
Ramalingam, Murugan; Young, Marian F.; Thomas, Vinoy; Sun, Limin; Chow, Laurence C.; Tison, Christopher K.; Chatterjee, Kaushik; Miles, William C.; Simon, Carl G.
2012-01-01
We have designed a 2-spinnerette device that can directly electrospin nanofiber scaffolds containing a gradient in composition that can be used to engineer interfacial tissues such as ligament and tendon. Two types of nanofibers are simultaneously electrospun in an overlapping pattern to create a nonwoven mat of nanofibers containing a composition gradient. The approach is an advance over previous methods due to its versatility - gradients can be formed from any materials that can be electros...
Interpretation of the reduced density gradient
Boto, Roberto A.; Contreras-García, Julia; Tierny, Julien; Piquemal, Jean-Philip
2015-01-01
An interpretation of the reduced density gradient in terms of the bosonic kinetic energy density is presented. Contrary to other bonding indicators based on the kinetic energy density such as the localised orbital locator (LOL) or the electron localization function (ELF), the reduced density gradient is not only able to identify covalent bondings, but also ionic and non-covalent interactions. This study reveals that the critical points of the reduced density gradient are closely connected wit...
Temperature gradient sensor based on CNT composite
International Nuclear Information System (INIS)
This work describes fabrication and investigation of thin film temperature gradient sensor based on the composite of carbon nano-tubes (CNT) and polymer adhesive. The dependences of the voltage, current and Seebeck coefficient of the sensor upon gradient of temperature were measured. It was observed that with increase of temperature gradient, the voltage and current of the sensor increase while the Seebeck coefficient decreases.
Methods of preparing polymeric gradient composites
A. Dybowska; J. Stabik
2007-01-01
Purpose: The goal of this work is to introduce basic methods of preparing polymeric gradient materials, which allow to join two different components to ensure the required properties and structure of the functionally gradient materials.Design/methodology/approach: In this paper few of methods of preparing functionally gradient polymeric materials are briefly described which were successful employed in many investigations performed during last few years.Findings: It was noticed that the knowle...
Temperature gradient sensor based on CNT composite
Energy Technology Data Exchange (ETDEWEB)
Karimov, Khasan S. [GIK Institute of Engineering Sciences and Technology, Topi, Swabi, KPK 23640 (Pakistan); Center for Innovative Development of Science and New Technologies of Academy of Sciences, Rudaki Ave.33, Dushanbe 734025 (Tajikistan); Abid, Muhammad [GIK Institute of Engineering Sciences and Technology, Topi, Swabi, KPK 23640 (Pakistan); Saleem, Muhammad, E-mail: msaleem108@hotmail.com [GIK Institute of Engineering Sciences and Technology, Topi, Swabi, KPK 23640 (Pakistan); Department of Physics, Government College of Science, Wahdat Road, Lahore 54570 (Pakistan); Akhmedov, Khakim M. [Center for Innovative Development of Science and New Technologies of Academy of Sciences, Rudaki Ave.33, Dushanbe 734025 (Tajikistan); Bashir, Muhammad M. [GIK Institute of Engineering Sciences and Technology, Topi, Swabi, KPK 23640 (Pakistan); Shafique, Umar [Electrical and Computer Engineering Department, Nano Technology Program, University of Waterloo (Canada); Ali, Muhammad M. [GIK Institute of Engineering Sciences and Technology, Topi, Swabi, KPK 23640 (Pakistan)
2014-08-01
This work describes fabrication and investigation of thin film temperature gradient sensor based on the composite of carbon nano-tubes (CNT) and polymer adhesive. The dependences of the voltage, current and Seebeck coefficient of the sensor upon gradient of temperature were measured. It was observed that with increase of temperature gradient, the voltage and current of the sensor increase while the Seebeck coefficient decreases.
Spatiotemporal Gradient Analysis of Differential Microphone Arrays
Kolundzija, Mihailo; Faller, Christof; Vetterli, Martin
2011-01-01
The literature on gradient and differential microphone arrays makes a distinction between the two types, and nevertheless shows how both types can be used to obtain the same directional responses. A more theoretically sound rationale for using delays in differential microphone arrays has not yet been given. This paper presents a gradient analysis of the sound field viewed as a spatio-temporal phenomenon, and gives a theoretical interpretation of the working principles of gradient and differen...
Energy Technology Data Exchange (ETDEWEB)
Blankenberg, F.G. [Div.of Pediatric Radiology, Lucile Salter Packard Children' s Hospital, Stanford, CA (United States); Tait, J.F. [Dept. of Laboratory Medicine, Univ. of Washington, Seattle (United States); Blankenberg, T.A. [Redding Pathology Labs., Redding, CA (United States); Post, A.M.; Strauss, H.W. [Div. of Nuclear Medicine, Dept. of Radiology, Stanford, CA (United States)
2001-09-01
Monocytes/macrophages (M{phi}s), the predominant cell types in subacute and chronic inflammation, are attracted to and activated by monocyte chemotactic peptide-1 (MCP-1). M{phi}s promote the resolution of inflammation through the induction of apoptosis and phagocytosis of senescent (spent) and bystander (superfluous) granulocytes. We wished to determine whether MCP-1, which selectively binds to M{phi}s, could be used to image subacute and chronic inflammation. We also sought to image granulocyte apoptosis within these lesions with technetium-99m labeled annexin V, a marker of apoptotic cells. Sterile inflammation was induced in 45 12-week-old male Sprague-Dawley rats by deep intramuscular injection of turpentine into the right thigh. Groups of four to six animals were then imaged 1 h after tail vein injection of 37-148 MBq (1-4 mCi) of {sup 99m}Tc-labeled MCP-1 or annexin V 1-14 days after turpentine treatment. Image analysis showed significantly greater activity of both MCP-1 and annexin V in inflamed thighs than in control thighs (165%-290% and 188%-313%, respectively; P<0.01) on days 1-5 after turpentine injection. Dual autoradiography in animals co-injected with iodine-125 labeled bovine serum albumin on days 1 and 4 showed specific location of MCP-1 to infiltrating M{phi}s while annexin V localized to focal zones of apoptosis within granulocytic infiltrates adjacent to abscess cavities. Scintillation well counting on day 5 demonstrated significantly higher (P<0.005) ratios of abscess to control thigh specific activities for MCP-1 (5.83{+-}2.17) and annexin V (9.24{+-}2.8) as compared to {sup 125}I-labeled bovine serum albumin (3.11{+-}0.65). No significant increases in uptake were noted at imaging or ex vivo analyses on days 13 and 14, when lesions were predominately fibrotic. It is concluded that {sup 99m}Tc-labeled MCP-1 and {sup 99m}Tc-labeled annexin V both localize in zones of subacute inflammation, reflecting the density of M{phi}s and the incidence of
STOCHASTIC GRADIENT METHODS FOR UNCONSTRAINED OPTIMIZATION
Directory of Open Access Journals (Sweden)
Nataša Krejić
2014-12-01
Full Text Available This papers presents an overview of gradient based methods for minimization of noisy functions. It is assumed that the objective functions is either given with error terms of stochastic nature or given as the mathematical expectation. Such problems arise in the context of simulation based optimization. The focus of this presentation is on the gradient based Stochastic Approximation and Sample Average Approximation methods. The concept of stochastic gradient approximation of the true gradient can be successfully extended to deterministic problems. Methods of this kind are presented for the data fitting and machine learning problems.
Wireless SAW Based Temperature Gradient Sensor Project
National Aeronautics and Space Administration — Prime Photonics proposes design and development of a surface acoustic wave (SAW) based temperature gradient sensor for instrumentation of thermal protection systems...
INFLUENCES OF SLOPE GRADIENT ON SOIL EROSION
Institute of Scientific and Technical Information of China (English)
刘青泉; 陈力; 李家春
2001-01-01
The main factors influencing soil erosion include the net rain excess, the water depth, the velocity, the shear stress of overland flows , and the erosion-resisting capacity of soil. The laws of these factors varying with the slope gradient were investigated by using the kinematic wave theory. Furthermore, the critical slope gradient of erosion was driven. The analysis shows that the critical slope gradient of soil erosion is dependent on grain size , soil bulk density , surface roughness, runoff length, net rain excess, and the friction coefficient of soil, etc. The critical slope gradient has been estimated theoretically with its range between 41. 5 °～ 50°.
Psoriasin: a novel chemotactic protein
DEFF Research Database (Denmark)
Jinquan, T; Vorum, H; Larsen, C G;
1996-01-01
Inflammatory skin disorders such as psoriasis show a preferential epidermal infiltration of neutrophils and T lymphocytes. This observation raises a question as to which factors determine the appearance and composition of leukocyte tissue infiltrations. Previously, we described a low molecular ma...
On lower order strain gradient plasticity theories
DEFF Research Database (Denmark)
Niordson, Christian Frithiof; Hutchinson, J. W.
2002-01-01
By way of numerical examples, this paper explores the nature of solutions to a class of strain gradient plasticity theories that employ conventional stresses, equilibrium equations and boundary conditions. Strain gradients come into play in these modified conventional theories only to alter the...
On lower order strain gradient plasticity theories
DEFF Research Database (Denmark)
Niordson, Christian Frithiof; Hutchinson, J. W.
2003-01-01
By way of numerical examples, this paper explores the nature of solutions to a class of strain gradient plasticity theories that employ conventional stresses, equilibrium equations and boundary conditions. Strain gradients come into play in these modified conventional theories only to alter the...
On 4-dimensional gradient shrinking solitons
Ni, Lei; Wallach, Nolan
2007-01-01
In this paper we classify the four dimensional gradient shrinking solitons under certain curvature conditions satisfied by all solitons arising from finite time singularities of Ricci flow on compact four manifolds with positive isotropic curvature. As a corollary we generalize a result of Perelman on three dimensional gradient shrinking solitons to dimension four.
Microinstabilities in weak density gradient tokamak systems
International Nuclear Information System (INIS)
A prominent characteristic of auxiliary-heated tokamak discharges which exhibit improved (''H-mode type'') confinement properties is that their density profiles tend to be much flatter over most of the plasma radius. Depsite this favorable trend, it is emphasized here that, even in the limit of zero density gradient, low-frequency microinstabilities can persist due to the nonzero temperature gradient
Efron's curvature of the structural gradient model
SEI, Tomonari
2010-01-01
The structural gradient model is a multivariate statistical model in order to extract various interactions of given data set. In this note, we show that Efron's statistical curvature of the structural gradient model is less than that of a competitive mixture model under a null hypothesis.
Newton's method in the context of gradients
Directory of Open Access Journals (Sweden)
John W. Neuberger
2007-09-01
Full Text Available This paper gives a common theoretical treatment for gradient and Newton type methods for general classes of problems. First, for Euler-Lagrange equations Newton's method is characterized as an (asymptotically optimal variable steepest descent method. Second, Sobolev gradient type minimization is developed for general problems using a continuous Newton method which takes into account a "boundary condition" operator.
An Inexpensive Digital Gradient Controller for HPLC.
Brady, James E.; Carr, Peter W.
1983-01-01
Use of gradient elution techniques in high performance liquid chromatography (HPLC) is often essential for direct separation of complex mixtures. Since most commercial controllers have features that are of marginal value for instructional purposes, a low-cost controller capable of illustrating essential features of gradient elution was developed.…
International Nuclear Information System (INIS)
In this letter we report the first clear experimental observation of density gradient stabilization of electron temperature gradient driven turbulence in a fusion plasma. It is observed that longer wavelength modes, k (perpendicular) ρs ∼< 10, are most stabilized by density gradient, and the stabilization is accompanied by about a factor of two decrease in the plasma effective thermal diffusivity.
Energy Technology Data Exchange (ETDEWEB)
Ren, Y; Mazzucato, E; Guttenfelder, W; Bell, R E; Domier, C W; LeBlanc, B P; Lee, K C; Luhmann Jr, N C; Smith, D R
2011-03-21
In this letter we report the first clear experimental observation of density gradient stabilization of electron temperature gradient driven turbulence in a fusion plasma. It is observed that longer wavelength modes, k⊥ρs ≤10, are most stabilized by density gradient, and the stabilization is accompanied by about a factor of two decrease in the plasma effective thermal diffusivity.
Instabilities in power law gradient hardening materials
DEFF Research Database (Denmark)
Niordson, Christian Frithiof; Tvergaard, Viggo
2005-01-01
Tension and compression instabilities are investigated for specimens with dimensions in the micron range. A finite strain generalization of a higher order strain gradient plasticity theory is implemented in a finite element scheme capable of modeling power law hardening materials. Effects of grad...... gradient hardening are found to delay the onset of localization under plane strain tension, and significantly reduce strain gradients in the localized zone. For plane strain compression gradient hardening is found to increase the load-carrying capacity significantly.......Tension and compression instabilities are investigated for specimens with dimensions in the micron range. A finite strain generalization of a higher order strain gradient plasticity theory is implemented in a finite element scheme capable of modeling power law hardening materials. Effects of...
Dual fuel gradients in uranium silicide plates
Energy Technology Data Exchange (ETDEWEB)
Pace, B.W. [Babock and Wilcox, Lynchburg, VA (United States)
1997-08-01
Babcock & Wilcox has been able to achieve dual gradient plates with good repeatability in small lots of U{sub 3}Si{sub 2} plates. Improvements in homogeneity and other processing parameters and techniques have allowed the development of contoured fuel within the cladding. The most difficult obstacles to overcome have been the ability to evaluate the bidirectional fuel loadings in comparison to the perfect loading model and the different methods of instilling the gradients in the early compact stage. The overriding conclusion is that to control the contour of the fuel, a known relationship between the compact, the frames and final core gradient must exist. Therefore, further development in the creation and control of dual gradients in fuel plates will involve arriving at a plausible gradient requirement and building the correct model between the compact configuration and the final contoured loading requirements.
Stellar Metallicity Gradients in SDSS galaxies
Roig, Benjamin; Yan, Renbin
2015-01-01
We infer stellar metallicity and abundance ratio gradients for a sample of red galaxies in the Sloan Digital Sky Survey (SDSS) Main galaxy sample. Because this sample does not have multiple spectra at various radii in a single galaxy, we measure these gradients statistically. We separate galaxies into stellar mass bins, stack their spectra in redshift bins, and calculate the measured absorption line indices in projected annuli by differencing spectra in neighboring redshift bins. After determining the line indices, we use stellar population modeling from the EZ\\_Ages software to calculate ages, metallicities, and abundance ratios within each annulus. Our data covers the central regions of these galaxies, out to slightly higher than $1 R_{e}$. We find detectable gradients in metallicity and relatively shallow gradients in abundance ratios, similar to results found for direct measurements of individual galaxies. The gradients are only weakly dependent on stellar mass, and this dependence is well-correlated with...
Approximate error conjugation gradient minimization methods
Kallman, Jeffrey S
2013-05-21
In one embodiment, a method includes selecting a subset of rays from a set of all rays to use in an error calculation for a constrained conjugate gradient minimization problem, calculating an approximate error using the subset of rays, and calculating a minimum in a conjugate gradient direction based on the approximate error. In another embodiment, a system includes a processor for executing logic, logic for selecting a subset of rays from a set of all rays to use in an error calculation for a constrained conjugate gradient minimization problem, logic for calculating an approximate error using the subset of rays, and logic for calculating a minimum in a conjugate gradient direction based on the approximate error. In other embodiments, computer program products, methods, and systems are described capable of using approximate error in constrained conjugate gradient minimization problems.
Generalized gradient approximation made simple
International Nuclear Information System (INIS)
Generalized gradient approximations Exc = ∫ d3 r f(n↑, n↓, triangledown n↑, triangledown n↓) for the exchange-correlation energy typically surpass the accuracy of the local spin density approximation and compete with standard quantum-chemical methods in electronic-structure calculations. But the derivation and analytic expression for the integrand f tend to be complicated and over-parametrized. We present a simple derivation of a simple but accurate expression for f, involving no parameter other than fundamental-constants. The derivation invoices only general ideas (not details) of the real-space cutoff construction, and agrees closely with the result of this construction. Besides its greater simplicity, this PBE96 functional has other advantages over PW91: (1) The correct behavior of the correlation energy is recovered under uniform scaling to the high-density limit. (2) The linear response of the uniform electron gas agrees with the accurate local spin density prediction. 96:006128*1 Paper TuI 6 Many-body effects are hidden in the universal density functional. The interaction of degenerate states via two-body operators, such as the electron-electron repulsion (for describing multiplets or the interaction of molecular fragments at large separations) are thus not explicitly considered in the Kohn-Sham scheme. In practice the density functionals have to be approximated, and there is a fundamental difficulty which arises in the case of degeneracy. While density functionals should be universal, the effect of degeneracy is linked to the potential characteristic to the atom, molecule, or crystal. There are, however, several possibilities to treat degeneracy effects within density functional theory, a few of which will be discussed. These take profit of the use of two-body operators, which can be, but must not be, the physical electron-electron interaction
Flow field thermal gradient gas chromatography.
Boeker, Peter; Leppert, Jan
2015-09-01
Negative temperature gradients along the gas chromatographic separation column can maximize the separation capabilities for gas chromatography by peak focusing and also lead to lower elution temperatures. Unfortunately, so far a smooth thermal gradient over a several meters long separation column could only be realized by costly and complicated manual setups. Here we describe a simple, yet flexible method for the generation of negative thermal gradients using standard and easily exchangeable separation columns. The measurements made with a first prototype reveal promising new properties of the optimized separation process. The negative thermal gradient and the superposition of temperature programming result in a quasi-parallel separation of components each moving simultaneously near their lowered specific equilibrium temperatures through the column. Therefore, this gradient separation process is better suited for thermally labile molecules such as explosives and natural or aroma components. High-temperature GC methods also benefit from reduced elution temperatures. Even for short columns very high peak capacities can be obtained. In addition, the gradient separation is particularly beneficial for very fast separations below 1 min overall retention time. Very fast measurements of explosives prove the benefits of using negative thermal gradients. The new concept can greatly reduce the cycle time of high-resolution gas chromatography and can be integrated into hyphenated or comprehensive gas chromatography setups. PMID:26235451
Sound beam manipulation based on temperature gradients
International Nuclear Information System (INIS)
Previous research with temperature gradients has shown the feasibility of controlling airborne sound propagation. Here, we present a temperature gradients based airborne sound manipulation schemes: a cylindrical acoustic omnidirectional absorber (AOA). The proposed AOA has high absorption performance which can almost completely absorb the incident wave. Geometric acoustics is used to obtain the refractive index distributions with different radii, which is then utilized to deduce the desired temperature gradients. Since resonant units are not applied in the scheme, its working bandwidth is expected to be broadband. The scheme is temperature-tuned and easy to realize, which is of potential interest to fields such as noise control or acoustic cloaking
Colour and stellar population gradients in galaxies
Tortora, C; Cardone, V F; Capaccioli, M; Jetzer, P; Molinaro, R
2010-01-01
We discuss the colour, age and metallicity gradients in a wide sample of local SDSS early- and late-type galaxies. From the fitting of stellar population models we find that metallicity is the main driver of colour gradients and the age in the central regions is a dominant parameter which rules the scatter in both metallicity and age gradients. We find a consistency with independent observations and a set of simulations. From the comparison with simulations and theoretical considerations we are able to depict a general picture of a formation scenario.
Sound beam manipulation based on temperature gradients
Energy Technology Data Exchange (ETDEWEB)
Qian, Feng [Key Laboratory of Modern Acoustics, Institute of Acoustics and School of Physics, Collaborative Innovation Center of Advanced Microstructures, Nanjing University, Nanjing 210093 (China); School of Physics & Electronic Engineering, Changshu Institute of Technology, Changshu 215500 (China); Quan, Li; Liu, Xiaozhou, E-mail: xzliu@nju.edu.cn; Gong, Xiufen [Key Laboratory of Modern Acoustics, Institute of Acoustics and School of Physics, Collaborative Innovation Center of Advanced Microstructures, Nanjing University, Nanjing 210093 (China)
2015-10-28
Previous research with temperature gradients has shown the feasibility of controlling airborne sound propagation. Here, we present a temperature gradients based airborne sound manipulation schemes: a cylindrical acoustic omnidirectional absorber (AOA). The proposed AOA has high absorption performance which can almost completely absorb the incident wave. Geometric acoustics is used to obtain the refractive index distributions with different radii, which is then utilized to deduce the desired temperature gradients. Since resonant units are not applied in the scheme, its working bandwidth is expected to be broadband. The scheme is temperature-tuned and easy to realize, which is of potential interest to fields such as noise control or acoustic cloaking.
Gradient Yamabe Solitons on Warped Products
He, Chenxu
2011-01-01
The special nature of gradient Yamabe soliton equation which was first observed by Cao-Sun-Zhang\\cite{CaoSunZhang} shows that a complete gradient Yamabe soliton with non-constant potential function is either defined on the Euclidean space with rotational symmetry, or on the warped product of the real line with a manifold of constant scalar curvature. In this paper we consider the classification in the latter case. We show that a complete gradient steady Yamabe soliton on warped product is nec...
Isotachophoresis of proteins in sucrose density gradients.
Acevedo, F
1993-10-01
The separation of proteins from human serum by isotachophoresis in sucrose density gradients, with mixtures of discrete amphoteric substances as spacers, is described. Open columns and columns with a dialysis membrane to hold the sucrose gradients were used. A simple algorithm based on the Kohlrausch function was used to calculate the amount of each spacer. The pH gradients generated in open columns were found to be in agreement with the calculations. The load was up to two gram proteins. The analysis of the fractions obtained after the separation showed a distribution of components similar to as analytical isotachophoresis. It is concluded that sucrose density gradients are suitable as supporting media for the preparative separation of proteins by isotachophoresis. The high resolution attained and the possibility of scaling-up the separation systems are major advantages of this system. In addition, the sample is easily and completely recoverable. PMID:8125049
Optimizing sampling approaches along ecological gradients
DEFF Research Database (Denmark)
Schweiger, Andreas; Irl, Severin D. H.; Steinbauer, Manuel;
2015-01-01
1. Natural scientists and especially ecologists use manipulative experiments or field observations along gradients to differentiate patterns driven by processes from those caused by random noise. A well-conceived sampling design is essential for identifying, analysing and reporting underlying...
The gradient flow in simple field theories
Monahan, Christopher
2015-01-01
The gradient flow is a valuable tool for the lattice community, with applications from scale-setting to implementing chiral fermions. Here I focus on the gradient flow as a means to suppress power-divergent mixing. Power-divergent mixing stems from the hypercubic symmetry of the lattice regulator and is a particular difficulty for calculations of, for example, high moments of parton distribution functions. The gradient flow removes power-divergent mixing on the lattice, provided the flow time is kept fixed in physical units, at the expense of introducing a new physical scale in the continuum. One approach to dealing with this new scale is the smeared operator product expansion, a formalism that systematically connects nonperturbative calculations of flowed operators to continuum physics. I study the role of the gradient flow in suppressing power-divergent mixing and present the first nonperturbative study in scalar field theory.
CMB Anisotropies from a Gradient Mode
Mirbabayi, Mehrdad
2014-01-01
A pure gradient mode must have no observable dynamical effect at linear level. We confirm this by showing that its contribution to the dipolar power asymmetry of CMB anisotropies vanishes, if Maldacena's consistency condition is satisfied. To this end, the existing second order Sachs-Wolfe formula in the squeezed limit is extended to include a gradient in the long mode and to account for the change in the location of the last scattering surface induced by this mode. At second order, a gradient mode generated in Single-field inflation is shown to induce a quadrupole moment. For instance in a matter-dominated model it is equal to 5/18 times the square of the linear gradient part. This quadrupole can be cancelled by superposing a quadratic perturbation. The result is shown to be a non-linear extension of Weinberg's adiabatic modes: a long-wavelength physical mode which looks locally like a coordinate transformation.
Unimodal and crossmodal gradients of spatial attention
DEFF Research Database (Denmark)
Föcker, J.; Hötting, K.; Gondan, Matthias;
2010-01-01
Behavioral and event-related potential (ERP) studies have shown that spatial attention is gradually distributed around the center of the attentional focus. The present study compared uni- and crossmodal gradients of spatial attention to investigate whether the orienting of auditory and visual...... spatial attention is based on modality specific or supramodal representations of space. Auditory and visual stimuli were presented from five speaker locations positioned in the right hemifield. Participants had to attend to the innermost or outmost right position in order to detect either visual or...... auditory deviant stimuli. Detection rates and event-related potentials (ERPs) indicated that spatial attention is distributed as a gradient. Unimodal spatial ERP gradients correlated with the spatial resolution of the modality. Crossmodal spatial gradients were always broader than the corresponding...
Enhancing stochastic kriging metamodels with gradient estimators
Chen, X.; Ankenman, B. E.; Nelson, B. L.
2013-01-01
Stochastic kriging is a new metamodeling technique for effectively representing the mean response surface implied by a stochastic simulation; it takes into account both stochastic simulation noise and uncertainty about the underlying response surface of interest. We show theoretically, through some simplified models, that incorporating gradient estimators into stochastic kriging tends to significantly improve surface prediction. To address the issue of which type of gradient estimator to use,...
Voltammetry under a Controlled Temperature Gradient
Jan Krejci, Jr.; Tomas Marvanek; Zuzana Sajdlova; Jan Krejci
2010-01-01
Electrochemical measurements are generally done under isothermal conditions. Here we report on the application of a controlled temperature gradient between the working electrode surface and the solution. Using electrochemical sensors prepared on ceramic materials with extremely high specific heat conductivity, the temperature gradient between the electrode and solution was applied here as a second driving force. This application of the Soret phenomenon increases the mass transfer in the Nerns...
The gradient flow in a twisted box
Energy Technology Data Exchange (ETDEWEB)
Ramos, Alberto [Deutsches Elektronen-Synchrotron (DESY), Zeuthen (Germany). John von Neumann-Inst. fuer Computing NIC
2013-08-15
We study the perturbative behavior of the gradient flow in a twisted box. We apply this information to define a running coupling using the energy density of the flow field. We study the step-scaling function and the size of cutoff effects in SU(2) pure gauge theory. We conclude that the twisted gradient flow running coupling scheme is a valid strategy for step-scaling purposes due to the relatively mild cutoff effects and high precision.
ONLINE REGULARIZED GENERALIZED GRADIENT CLASSIFICATION ALGORITHMS
Institute of Scientific and Technical Information of China (English)
Leilei Zhang; Baohui Sheng; Jianli Wang
2010-01-01
This paper considers online classification learning algorithms for regularized classification schemes with generalized gradient.A novel capacity independent approach is presented.It verifies the strong convergence of sizes and yields satisfactory convergence rates for polynomially decaying step sizes.Compared with the gradient schemes,this al-gorithm needs only less additional assumptions on the loss function and derives a stronger result with respect to the choice of step sizes and the regularization parameters.
Thermal gradient analysis of solidifying casting
J. Suchoń; M. Cholewa; M. Kondracki
2008-01-01
For description of casting solidification and crystallization process the thermal derivative analysis (TDA) is commonly used. Besides the process kinetics considered in TDA method to describe the solidification process, the thermal gradient analysis can be also used for this purpose [1, 2]. In conducted studies analysis of thermal gradient distribution inside the solidifying wedge casting was shown which enabled determination of heat flow intensity on casting section.
Thermal gradient analysis of solidifying casting
Directory of Open Access Journals (Sweden)
J. Suchoń
2008-08-01
Full Text Available For description of casting solidification and crystallization process the thermal derivative analysis (TDA is commonly used. Besides the process kinetics considered in TDA method to describe the solidification process, the thermal gradient analysis can be also used for this purpose [1, 2]. In conducted studies analysis of thermal gradient distribution inside the solidifying wedge casting was shown which enabled determination of heat flow intensity on casting section.
Salinity gradient power: utilizing vapor pressure differences.
Olsson, M; Wick, G L; Isaacs, J D
1979-10-26
By utilizing the vapor pressure difference between high-salinity and lowsalinity wvater, one can obtain power from the gradients of salinity. This scheme eliminates the major problems associated with conversion methods in which membranes are used. The method we tested gave higher conversion efficiencies than membrane methods. Furthermore, hardware and techniques being developed for ocean thermal energy conversion may be applied to this approach to salinity gradient energy conversion. PMID:17809370
Design of spherical symmetric gradient index lenses
Miñano Dominguez, Juan Carlos; Grabovičkić, Dejan; Benitez Gimenez, Pablo; Gonzalez Lopez, Juan Carlos; Santamaria Galdon, Maria Asuncion
2012-01-01
Spherical symmetric refractive index distributions also known as Gradient Index lenses such as the Maxwell-Fish-Eye (MFE), the Luneburg or the Eaton lenses have always played an important role in Optics. The recent development of the technique called Transformation Optics has renewed the interest in these gradient index lenses. For instance, Perfect Imaging within the Wave Optics framework has recently been proved using the MFE distribution. We review here the design problem of these lenses, ...
Gradient-prolongation commutativity and graph theory
Musy, François; Nicolas, Laurent; Perrussel, Ronan
2007-01-01
6 pages International audience This Note gives conditions that must be imposed to algebraic multilevel discretizations involving at the same time nodal and edge elements so that a gradient-prolongation commutativity condition will be satisfied; this condition is very important, since it characterizes the gradients of coarse nodal functions in the coarse edge function space. They will be expressed using graph theory and they provide techniques to compute approximation bases at each level.
Nonlinear strain gradient elastic thin shallow shells
Lazopoulos, K.A.
2011-01-01
Abstract The governing equilibrium equations for strain gradient elastic thin shallow shells are derived, considering non-linear strains and linear constitutive strain gradient elastic relations. Adopting Kirchhoff's theory of thin shallow structures, the equilibrium equations, along with the boundary conditions, are formulated through a variational procedure. It turns out that new terms are introduced, indicating the importance of the cross-section area in bending of thin plates. ...
Gradient-based compressive image fusion
Institute of Scientific and Technical Information of China (English)
Yang CHEN‡; Zheng QIN
2015-01-01
We present a novel image fusion scheme based on gradient and scrambled block Hadamard ensemble (SBHE) sam-pling for compressive sensing imaging. First, source images are compressed by compressive sensing, to facilitate the transmission of the sensor. In the fusion phase, the image gradient is calculated to reflect the abundance of its contour information. By com-positing the gradient of each image, gradient-based weights are obtained, with which compressive sensing coefficients are achieved. Finally, inverse transformation is applied to the coefficients derived from fusion, and the fused image is obtained. Information entropy (IE), Xydeas’s and Piella’s metrics are applied as non-reference objective metrics to evaluate the fusion quality in line with different fusion schemes. In addition, different image fusion application scenarios are applied to explore the scenario adaptability of the proposed scheme. Simulation results demonstrate that the gradient-based scheme has the best per-formance, in terms of both subjective judgment and objective metrics. Furthermore, the gradient-based fusion scheme proposed in this paper can be applied in different fusion scenarios.
Nucleation modes in sharp concentration gradients
Energy Technology Data Exchange (ETDEWEB)
Hodaj, F.; Desre, P.J. [LTPCM-UMR CNRS/INPG/UJF, Saint Martin d`Heres (France); Gusak, A.M.; Kovalchuk, A.O. [Cherkassy State Univ. (Ukraine). Dept. of Theoretical Physics
1998-12-31
Reaction kinetics in bimetallic multilayers have demonstrated that sharp unidirectional concentration gradient, which develop as interdiffusion proceeds at the interface are able to delay or to suppress nucleation of intermetallics. It has been found that the existence of a critical gradient beyond which nucleation is inhibited is strongly dependent on the mechanism of formation of the embryo. A mechanism of nucleation under concentration gradient ({gradient}c) is proposed and treated on the basis of the Fokker-Planck equation for the distribution in the size space. The influence of the aspect ratio of the embryo on the critical concentration gradient is also studied. Due to the fluctuations of the embryo shape, it is shown that the minimization of the thermodynamic potential leading to the aspect ratio of the embryo is only significant beyond a certain value of the concentration gradient. Application is presented to the nucleation of the compound Ni{sub 10}Zr{sub 7} in an amorphous layer Ni-Zr.
Density gradient effects in the tokamak edge turbulence with temperature gradient driving
International Nuclear Information System (INIS)
Based on the magnetohydrodynamics, a new theoretical model is established. In this model the density gradient effects is added into the tokamak edge turbulence with temperature gradient driving. The physical mechanism and the density gradient effects in evolution of this turbulence are discussed. The fluctuation levels and the associated diffusion coefficients at the turbulent saturation are calculated. The theoretical results are in agreement with the experimental ones on TEXT
International Nuclear Information System (INIS)
The calcium ionophore ionomycin primes polymorphonuclear leukocytes (PMN) for increased superoxide production upon stimulation with the chemotactic peptide FMLP (Helman Finkel, T. et al J Biol Chem 1987; 262: 12589-12596) In this investigation we assessed the effect of PMN priming with either alpha hemolysin (AH) or the calcium ionophore A23187, both of which increase intracellular calcium, on the oxidative metabolism of PMN (as measured by chemiluminescence) in response to secondary stimulation with FMLP. Both A23187 and AH priming increased, the luminol-enhanced chemiluminescence in response to secondary stimulation with FMLP, indicating overstimulation of PMLP oxidative metabolism. Additional experiments using lucigenin as chemiluminescence enhancer showed that A23187, but not AH priming of PMN, increased superoxide release in a manner similar to that reported for ionomycin. These results are discussed in reference to infectious processes involving hemolytic E. coli (Author)
Irreducible decomposition of strain gradient tensor in isotropic strain gradient elasticity
Lazar, Markus
2016-01-01
In isotropic strain gradient elasticity, we decompose the strain gradient tensor into its irreducible pieces under the n-dimensional orthogonal group O(n). Using the Young tableau method for traceless tensors, four irreducible pieces (n>2), which are canonical, are obtained. In three dimensions, the strain gradient tensor can be decomposed into four irreducible pieces with 7+5+3+3 independent components whereas in two dimensions, the strain gradient tensor can be decomposed into three irreducible pieces with 2+2+2 independent components. The knowledge of these irreducible pieces is extremely useful when setting up constitutive relations and strain energy.
Gradient-enhanced FAWSETS perfusion measurements
Marro, Kenneth I.; Lee, Donghoon; Hyyti, Outi M.
2005-08-01
This work describes the use of custom-built gradients to enhance skeletal muscle perfusion measurements acquired with a previously described arterial spin labeling technique known as FAWSETS (flow-driven arterial water stimulation with elimination of tissue signal). Custom-built gradients provide active control of the static magnetic field gradient on which FAWSETS relies for labeling. This allows selective, 180° modulations of the phase of the perfusion component of the signal. Phase cycling can then be implemented to eliminate all extraneous components leaving a signal that exclusively reflects capillary-level perfusion. Gradient-enhancement substantially reduces acquisition time and eliminates the need to acquire an ischemic signal to quantify perfusion. This removes critical obstacles to application of FAWSETS in organs other than skeletal muscle and makes the measurements more desirable for clinical environments. The basic physical principles of gradient-enhancement are demonstrated in flow phantom experiments and in vivo utility is demonstrated in rat hind limb during stimulated exercise.
Gradient expansion, curvature perturbations and magnetized plasmas
Giovannini, Massimo
2011-01-01
The properties of magnetized plasmas are always investigated under the hypothesis that the relativistic inhomogeneities stemming from the fluid sources and from the geometry itself are sufficiently small to allow for a perturbative description prior to photon decoupling. The latter assumption is hereby relaxed and pre-decoupling plasmas are described within a suitable expansion where the inhomogeneities are treated to a given order in the spatial gradients. It is argued that the (general relativistic) gradient expansion shares the same features of the drift approximation, customarily employed in the description of cold plasmas, so that the two schemes are physically complementary in the large-scale limit and for the low-frequency branch of the spectrum of plasma modes. The two-fluid description, as well as the magnetohydrodynamical reduction, are derived and studied in the presence of the spatial gradients of the geometry. Various solutions of the coupled system of evolution equations in the anti-Newtonian re...
Production process for function-gradient material
International Nuclear Information System (INIS)
A function-gradient material to be used for a heat receiving element and a heat releasing plate of a divertor plate for use in a thermonuclear power plant is produced. Powders of two or more kinds of high-melting point ingredients having different grain size are formed into a slurry. This slurry is cast into a mold to form a molding product of powders having ingredients of high-melting point in which the grain size is gradually increased and the porosity is gradually reduced by the change of the sedimentation velocity. The molding product is sintered to form a skeleton having a structure in which the porosity is continuously changed to one surface. Further, the skeleton is impregnated with ingredients of low melting point under melting to form a function-gradient material. With such procedures, continuously gradient structure can be formed easily without using a powder accumulation device. (T.M.)
Conjugate gradient algorithms using multiple recursions
Energy Technology Data Exchange (ETDEWEB)
Barth, T.; Manteuffel, T.
1996-12-31
Much is already known about when a conjugate gradient method can be implemented with short recursions for the direction vectors. The work done in 1984 by Faber and Manteuffel gave necessary and sufficient conditions on the iteration matrix A, in order for a conjugate gradient method to be implemented with a single recursion of a certain form. However, this form does not take into account all possible recursions. This became evident when Jagels and Reichel used an algorithm of Gragg for unitary matrices to demonstrate that the class of matrices for which a practical conjugate gradient algorithm exists can be extended to include unitary and shifted unitary matrices. The implementation uses short double recursions for the direction vectors. This motivates the study of multiple recursion algorithms.
On fracture in finite strain gradient plasticity
DEFF Research Database (Denmark)
Martínez Pañeda, Emilio; Niordson, Christian Frithiof
2016-01-01
In this work a general framework for damage and fracture assessment including the effect of strain gradients is provided. Both mechanism-based and phenomenological strain gradient plasticity (SGP) theories are implemented numerically using finite deformation theory and crack tip fields are...... investigated. Differences and similarities between the two approaches within continuum SGP modeling are highlighted and discussed. Local strain hardening promoted by geometrically necessary dislocations (GNDs) in the vicinity of the crack leads to much higher stresses, relative to classical plasticity...... predictions. These differences increase significantly when large strains are taken into account, as a consequence of the contribution of strain gradients to the work hardening of the material. The magnitude of stress elevation at the crack tip and the distance ahead of the crack where GNDs significantly alter...
Collective chemotaxis through noisy multicellular gradient sensing
Varennes, Julien; Mugler, Andrew
2016-01-01
Collective cell migration in response to a chemical cue occurs in many biological processes such as morphogenesis and cancer metastasis. Clusters of migratory cells in these systems are capable of responding to gradients of less than 1% difference in chemical concentration across a cell length. Multicellular systems are extremely sensitive to their environment and while the limits to multicellular sensing are becoming known, how this information leads to coherent migration remains poorly understood. We develop a computational model of multicellular sensing and migration in which groups of cells collectively measure noisy chemical gradients. The output of the sensing process is coupled to individual cells polarization to model migratory behavior. Through the use of numerical simulations, we find that larger clusters of cells detect the gradient direction with higher precision and thus achieve stronger polarization bias, but larger clusters also induce more drag on collective motion. The trade-off between these...
Dynamics of gradient formation by intracellular shuttling
Energy Technology Data Exchange (ETDEWEB)
Berezhkovskii, Alexander M. [Mathematical and Statistical Computing Laboratory, Division of Computational Bioscience, Center for Information Technology, National Institutes of Health, Bethesda, Maryland 20892 (United States); Shvartsman, Stanislav Y. [Department of Chemical and Biological Engineering and Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey 08544 (United States)
2015-08-21
A number of important cellular functions rely on the formation of intracellular protein concentration gradients. Experimental studies discovered a number of mechanisms for the formation of such gradients. One of the mechanisms relies on the intracellular shuttling of a protein that interconverts between the two states with different diffusivities, under the action of two enzymes, one of which is localized to the plasma membrane, whereas the second is uniformly distributed in the cytoplasm. Recent work reported an analytical solution for the steady state gradient in this mechanism, obtained in the framework of a one-dimensional reaction-diffusion model. Here, we study the dynamics in this model and derive analytical expressions for the Laplace transforms of the time-dependent concentration profiles in terms of elementary transcendental functions. Inverting these transforms numerically, one can obtain time-dependent concentration profiles of the two forms of the protein.
Vertical gradients of sunspot magnetic fields
Energy Technology Data Exchange (ETDEWEB)
Hagyard, M.J.; Teuber, D.; West, E.A.; Tandberg-Hanssen, E.; Henze, W. Jr.; Beckers, J.M.
1983-04-01
The results of a Solar Maximum Mission (SMM) guest investigation to determine the vertical gradients of sunspot magnetic fields for the first time from coordinated observations of photospheric and transition-region fields are described. Descriptions are given of both the photospheric vector field of a sunspot, derived from observations using the NASA Marshall Space Flight Center vector magnetograph, and of the line-of-sight component in the transition region, obtained from the SMM Ultraviolet Spectrometer and Polarimeter instrument. On the basis of these data, vertical gradients of the line-of-sight magnetic field component are calculated using three methods. It is found that the vertical gradient of Bz is lower than values from previous studies and that the transition-region field occurs at a height of approximately 4000-6000 km above the photosphere.
Substrate Curvature Gradient Drives Rapid Droplet Motion
Lv, Cunjing; Chen, Chao; Chuang, Yin-Chuan; Tseng, Fan-Gang; Yin, Yajun; Grey, Francois; Zheng, Quanshui
2014-07-01
Making small liquid droplets move spontaneously on solid surfaces is a key challenge in lab-on-chip and heat exchanger technologies. Here, we report that a substrate curvature gradient can accelerate micro- and nanodroplets to high speeds on both hydrophilic and hydrophobic substrates. Experiments for microscale water droplets on tapered surfaces show a maximum speed of 0.42 m/s, 2 orders of magnitude higher than with a wettability gradient. We show that the total free energy and driving force exerted on a droplet are determined by the substrate curvature and substrate curvature gradient, respectively. Using molecular dynamics simulations, we predict nanoscale droplets moving spontaneously at over 100 m/s on tapered surfaces.
Adaptive Thermostats for Noisy Gradient Systems
Leimkuhler, Benedict
2015-01-01
We study numerical methods for sampling probability measures in high dimensions where the underlying model is only approximately identified with a gradient system. Extended stochastic dynamical methods are discussed which have application to multiscale models, nonequilibrium molecular dynamics and Bayesian sampling techniques arising in emerging machine learning applications. In addition to providing a more comprehensive discussion of the foundations of these methods, we propose a new numerical method for the Adaptive Langevin/stochastic gradient Nos\\'e-Hoover thermostat that achieves a dramatic improvement in numerical efficiency over the most popular stochastic gradient methods reported in the literature. We also demonstrate that the newly-established method inherits a superconvergence property (fourth order convergence to the invariant measure for configurational quantities) recently demonstrated in the setting of Langevin dynamics. Our findings are verified by numerical experiments.
Short wavelength ion temperature gradient turbulence
Chowdhury, J.; Brunner, S; Ganesh, R.; Lapillonne, X.; Villard, L.; Jenko, F.
2012-01-01
The ion temperature gradient (ITG) mode in the high wavenumber regime (k(y)rho(s) > 1), referred to as short wavelength ion temperature gradient mode (SWITG) is studied using the nonlinear gyrokinetic electromagnetic code GENE. It is shown that, although the SWITG mode may be linearly more unstable than the standard long wavelength (k(y)rho(s) < 1) ITG mode, nonlinearly its contribution to the total thermal ion heat transport is found to be low. We interpret this as resulting from an increase...
Electric field gradients in Hg compounds
DEFF Research Database (Denmark)
Arcisauskaité, Vaida; Knecht, Stefan; Sauer, Stephan P. A.;
2012-01-01
We examine the performance of Density Functional Theory (DFT) approaches based on the Zeroth-Order Regular Approximation (ZORA) Hamiltonian (with and without inclusion of spinorbit coupling) for predictions of electric ¿eld gradients (EFGs) at the heavy atom Hg nucleus. This is achieved by compar......We examine the performance of Density Functional Theory (DFT) approaches based on the Zeroth-Order Regular Approximation (ZORA) Hamiltonian (with and without inclusion of spinorbit coupling) for predictions of electric ¿eld gradients (EFGs) at the heavy atom Hg nucleus. This is achieved...
Gradient Elasticity Formulations for Micro/Nanoshells
Directory of Open Access Journals (Sweden)
Bohua Sun
2014-01-01
Full Text Available The focus of this paper is on illustrating how to extend the second author’s gradient theory of elasticity to shells. Three formulations are presented based on the implicit gradient elasticity constitutive relation 1 -ld2∇2σij=Cijkl(1-ls2∇2εkl and its two approximations 1+ls2∇2-ld2∇2σij=Cijklεkl and σij=Cijkl(1+ld2∇2-ls2∇2εkl.
Measurement of gradient magnetic field temporal characteristics
International Nuclear Information System (INIS)
We describe a technique of measuring the time dependence and field distortions of magnetic fields due to eddy currents (EC) produced by time-dependent magnetic field gradients. The EC measuring technique makes use of a large volume sample and selective RF excitation pulses and free induction decay (FID) (or a spin or gradient echo) to measure the out-of-phase component of the FID, which is proportional to γδB, i.e. the amount the signal is off resonance. The measuring technique is sensitive, easy to implement and interpret, and used for determining pre-emphasis compensation parameters
Up-gradient transport in a probabilistic transport model
DEFF Research Database (Denmark)
Gavnholt, J.; Juul Rasmussen, J.; Garcia, O.E.;
2005-01-01
The transport of particles or heat against the driving gradient is studied by employing a probabilistic transport model with a characteristic particle step length that depends on the local concentration or heat gradient. When this gradient is larger than a prescribed critical value, the standard....... These results supplement recent works by van Milligen [Phys. Plasmas 11, 3787 (2004)], which applied Levy distributed step sizes in the case of supercritical gradients to obtain the up-gradient transport. (c) 2005 American Institute of Physics....
Color gradient background oriented schlieren imaging
Mier, Frank Austin; Hargather, Michael
2015-11-01
Background oriented schlieren (BOS) imaging is a method of visualizing refractive disturbances through the comparison of digital images. By comparing images with and without a refractive disturbance visualizations can be achieved via a range of image processing methods. Traditionally, backgrounds consist of random distributions of high contrast speckle patterns. To image a refractive disturbance, a digital image correlation algorithm is used to identify the location and magnitude of apparent pixel shifts in the background pattern. Here a novel method of using color gradient backgrounds is explored as an alternative. The gradient background eliminates the need to perform an image correlation between the two digital images, as simple image subtraction can be used to identify the location, magnitude, and direction of the image distortions. This allows for quicker processing. Two-dimensional gradient backgrounds using multiple colors are shown. The gradient backgrounds are demonstrated to provide quantitative data limited only by the camera's pixel resolution, whereas speckle backgrounds limit resolution to the size of the random pattern features and image correlation window size. Additional results include the use of a computer screen as a background.
Checking the Quality of Gradient Magnetic Fields
Czech Academy of Sciences Publication Activity Database
Bartušek, Karel; Gescheidtová, E.; Kubásek, R.
Gliwice : Politechnika Slaska, 2006, s. 207-210. ISBN 83-85940-28-6. [IC-SPETO 2006 International Conference on Fundamentals of Electrotechnics and Circuit Theory /29./. Gliwice (PL), 24.05.2006-27.05.2006] Institutional research plan: CEZ:AV0Z20650511 Keywords : MR * NMR * gradient magnetic field Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering
Lactate uptake against a concentration gradient
DEFF Research Database (Denmark)
Nordström, Carl-Henrik; Nielsen, Troels Halfeld; Nielsen, Hans Boye
2014-01-01
The recently published article by Jalloh et al (Jalloh I, Helmy A, Shannon RJ, Gallagher CN, Menon D, Carpenter K, Hutchinson P. Lactate uptake by the injured human brain - evidence from an arterio-venous gradient and cerebral microdialysis study. J Neurotrauma. 2013 Aug 22. [Epub ahead of print]...... is of fundamental importance the misconception should be corrected....
Joining of Tungsten Armor Using Functional Gradients
International Nuclear Information System (INIS)
The joining of low thermal expansion armor materials such as tungsten to high thermal expansion heat sink materials has been a major problem in plasma facing component (PFC) development. Conventional planar bonding techniques have been unable to withstand the high thermal induced stresses resulting from fabrication and high heat flux testing. During this investigation, innovative functional gradient joints produced using vacuum plasma spray forming techniques have been developed for joining tungsten armor to copper alloy heat sinks. A model was developed to select the optimum gradient architecture. Based on the modeling effort, a 2mm copper rich gradient was selected. Vacuum plasma pray parameters and procedures were then developed to produce the functional gradient joint. Using these techniques, dual cooling channel, medium scale mockups (32mm wide x 400mm length) were produced with vacuum plasma spray formed tungsten armor. The thickness of the tungsten armor was up to 5mm thick. No evidence of debonding at the interface between the heat sink and the vacuum plasma sprayed material was observed.
40 CFR 230.25 - Salinity gradients.
2010-07-01
... 40 Protection of Environment 24 2010-07-01 2010-07-01 false Salinity gradients. 230.25 Section 230.25 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) OCEAN DUMPING SECTION 404(b)(1) GUIDELINES FOR SPECIFICATION OF DISPOSAL SITES FOR DREDGED OR FILL MATERIAL Potential Impacts...
CMB anisotropies from a gradient mode
Mirbabayi, Mehrdad; Zaldarriaga, Matias
2015-03-01
A linear gradient mode must have no observable dynamical effect on short distance physics. We confirm this by showing that if there was such a gradient mode extending across the whole observable Universe, it would not cause any hemispherical asymmetry in the power of CMB anisotropies, as long as Maldacena's consistency condition is satisfied. To study the effect of the long wavelength mode on short wavelength modes, we generalize the existing second order Sachs-Wolfe formula in the squeezed limit to include a gradient in the long mode and to account for the change in the location of the last scattering surface induced by this mode. Next, we consider effects that are of second order in the long mode. A gradient mode Φ = qṡx generated in Single-field inflation is shown to induce an observable quadrupole moment. For instance, in a matter-dominated model it is equal to Q = 5(qṡx)2/18. This quadrupole can be canceled by superposition of a quadratic perturbation. The result is shown to be a nonlinear extension of Weinberg's adiabatic modes: a long-wavelength physical mode which looks locally like a coordinate transformation.
Conformally Coupled Induced Gravity with Gradient Torsion
Yoon, Yongsung
1999-01-01
It is found that conformally coupled induced gravity with gradient torsion gives a dilaton gravity in Riemann geometry. In the Einstein frame of the dilaton gravity the conformal symmetry is hidden and a non-vanishing cosmological constant is not plausible due to the constraint of the conformal coupling.
Gravity gradient torque of spacecraft orbiting asteroids
Wang, Yue
2013-01-01
Purpose: This paper presents a full fourth-order model of the gravity gradient torque of spacecraft around asteroids by taking into consideration of the inertia integrals of the spacecraft up to the fourth order, which is an improvement of the previous fourth-order model of the gravity gradient torque. Design, methodology and approach: The fourth-order gravitational potential of the spacecraft is derived based on Taylor expansion. Then the expression of the gravity gradient torque in terms of gravitational potential derivatives is derived. By using the formulation of the gravitational potential, explicit formulations of the full fourth-order gravity gradient torque are obtained. Then a numerical simulation is carried out to verify our model. Findings: We find that our model is more sound and precise than the previous fourth-order model due to the consideration of higher-order inertia integrals of the spacecraft. Numerical simulation results show that the motion of the previous fourth-order model is quite diff...
Examining the Education Gradient in Chronic Illness
Chatterji, Pinka; Joo, Heesoo; Lahiri, Kajal
2015-01-01
We examine the education gradient in diabetes, hypertension, and high cholesterol. We take into account diagnosed as well as undiagnosed cases and use methods accounting for the possibility of unmeasured factors that are correlated with education and drive both the likelihood of having illness and the propensity to be diagnosed. Data come from the…
Ocean thermal gradient hydraulic power plant.
Beck, E J
1975-07-25
Solar energy stored in the oceans may be used to generate power by exploiting ploiting thermal gradients. A proposed open-cycle system uses low-pressure steam to elevate vate water, which is then run through a hydraulic turbine to generate power. The device is analogous to an air lift pump. PMID:17813707
Natural equivalents of thermal gradient experiments
Rodríguez, Carmen; Geyer, Adelina; Castro, Antonio; Villaseñor, Antonio
2015-06-01
Crystallization experiments using the intrinsic thermal gradient in 10 mm length capsules loaded in piston-cylinder assemblies were used to investigate silicic magma crystallization. The application of experimental results to natural environments requires the scaling of physical parameters of petrological interest. Therefore, we propose here a comparative study between thermal gradients and numerical simulations of natural magma chambers. We use the Finite Element method to calculate thermal profiles across a cooling silicic magma chamber. These numerical profiles are compared with the intrinsic thermal structure of half-inch, piston-cylinder assemblies at 500 MPa. It is concluded that a set of varied magma chamber geometries and/or distinct stages of their cooling history can approach the intrinsic thermal structure of laboratory experiments. Once the thermal properties for magma and its host rock are fixed, the experimental-numerical approach is mostly dependent on the volume and aspect ratio of the magma chamber. Our results indicate, for instance, that a 10 mm length capsule with a thermal gradient of 40 °C/mm (from 1100 to 700 °C) may represent a 150-1100 m wide portion of a cooling magma chamber of 10-20 km diameter and 2-10 km height, emplaced at a depth of 18 km. Additional possible scenarios are represented by larger magma chambers, up to 30 km diameter, in which the experimental thermal gradient can represent a 150-3700 m-thin-section of the large igneous bodies.
Strain gradient plasticity: energetic or dissipative?
Fleck, N. A.; Willis, J. R.
2015-08-01
For an infinite slab of strain gradient sensitive material subjected to plane-strain tensile loading, computation established and analysis confirmed that passivation of the lateral boundaries at some stage of loading inhibits plastic deformation upon further loading. This result is not surprising in itself except that, remarkably, if the gradient terms contribute to the dissipation, the plastic deformation is switched off completely and only resumes at a clearly defined higher load, corresponding to a total strain , say. The analysis presented in this paper confirms the delay of plastic deformation following passivation and determines the exact manner in which the plastic flow resumes. The plastic strain rate is continuous at the exact point of resumption of plastic flow and, for the first small increment in the imposed total strain, the corresponding increment in plastic strain, , is proportional to . The constant A in the relation , where denotes the plastic strain increment at the centre of the slab, has been determined explicitly; it depends on the hardening modulus of the material. The presence of energetic gradient terms has no effect on the value of unless the dissipative terms are absent, in which case passivation reduces the rate of plastic deformation but introduces no delay. This qualitative effect of dissipative gradient terms opens the possibility of experimental discrimination of their presence or absence. The analysis employs an incremental variational formulation that is likely to find use in other problems.
Effect of Elongation on Critical Gradient for Toroidal Electron Temperature Gradient Modes
Institute of Scientific and Technical Information of China (English)
PENG Li-Li; GAO Zhe
2008-01-01
The electron temperature gradient mode is investigated in elongated toroidal plasmas with a gyrokinetic integral eigenmode equation code. Dependence of the critical electron temperature gradient on the elongation is calculated.It is found that when the elongation increases, the growth rate spectrum is greatly shifted towards shorter poloidal wavelength, and then the poloidal wavenumber at which the mode is destabilizing critically in elongated plasmas will be larger than that in circular plasmas.
Gradient Coils Temperature Controller in a Gradient System for MR Tomography
Czech Academy of Sciences Publication Activity Database
Bartušek, Karel; Dokoupil, Zdeněk; Gescheidtová, E.; Smékal, Z.
Los Alamitos : IEEE Computer Society, 2007, P8:1-4. ISBN 0-7695-2807-4. [ICONS 2007 - International Conference on Systems /2./. Sainte-Luce, Martinique (FR), 22.04.2007-28.04.2007] R&D Projects: GA ČR(CZ) GA102/07/1086 Institutional research plan: CEZ:AV0Z20650511 Keywords : MR tomography * temperature controller * gradients * gradient coils * digital signal processor Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering
Temperature gradients drive mechanical energy gradients in the flight muscle of Manduca sexta.
George, N T; Sponberg, S; Daniel, T L
2012-02-01
A temperature gradient throughout the dominant flight muscle (dorsolongitudinal muscle, DLM(1)) of the hawkmoth Manduca sexta, together with temperature-dependent muscle contractile rates, demonstrates that significant spatial variation in power production is possible within a single muscle. Using in situ work-loop analyses under varying muscle temperatures and phases of activation, we show that regional differences in muscle temperature will induce a spatial gradient in the mechanical power output throughout the DLM(1). Indeed, we note that this power gradient spans from positive to negative values across the predicted temperature range. Warm ventral subunits produce positive power at their in vivo operating temperatures, and therefore act as motors. Concurrently, as muscle temperature decreases dorsally, the subunits produce approximately zero mechanical power output, acting as an elastic energy storage source, and negative power output, behaving as a damper. Adjusting the phase of activation further influences the temperature sensitivity of power output, significantly affecting the mechanical power output gradient that is expressed. Additionally, the separate subregions of the DLM(1) did not appear to employ significant physiological compensation for the temperature-induced differences in power output. Thus, although the components of a muscle are commonly thought to operate uniformly, a significant within-muscle temperature gradient has the potential to induce a mechanical power gradient, whereby subunits within a muscle operate with separate and distinct functional roles. PMID:22246256
Automated apparatus for producing gradient gels
Anderson, N.L.
1983-11-10
Apparatus for producing a gradient gel which serves as a standard medium for a two-dimensional analysis of proteins, the gel having a density gradient along its height formed by a variation in gel composition, with the apparatus including first and second pumping means each including a plurality of pumps on a common shaft and driven by a stepping motor capable of providing small incremental changes in pump outputs for the gel ingredients, the motors being controlled, by digital signals from a digital computer, a hollow form or cassette for receiving the gel composition, means for transferring the gel composition including a filler tube extending near the bottom of the cassette, adjustable horizontal and vertical arms for automatically removing and relocating the filler tube in the next cassette, and a digital computer programmed to automatically control the stepping motors, arm movements, and associated sensing operations involving the filling operation.
Spectrum of resistivity gradient driven turbulence
International Nuclear Information System (INIS)
The resistivity fluctuation correlation function and electrostatic potential spectrum of resistivity gradient driven turbulence are calculated analytically and compared to the results of three dimensional numerical calculations. Resistivity gradient driven turbulence is characterized by effective Reynolds' numbers of order unity. Steady-state solution of the renormalized spectrum equations yields an electrostatic potential spectrum (circumflex phi2)/sub ktheta/ approx. k/sub theta//sup -3.25/. Agreement of the analytically calculated potential spectrum and mean-square radial velocity with the results of multiple helicity numerical calculations is excellent. This comparison constitutes a quantitative test of the analytical turbulence theory used. The spectrum of magnetic fluctuations is also calculated, and agrees well with that obtained from the numerical computations. 13 refs., 8 figs
Temperature gradient driven lasing and stimulated cooling
Sandner, K
2012-01-01
A laser can be understood as thermodynamic engine converting heat to a coherent single mode field close to Carnot efficiency. From this perspective spectral shaping of the excitation light generates a higher effective temperature on the pump than on the gain transition. Here, using a toy model of a quantum well structure with two suitably designed tunnel-coupled wells kept at different temperature, we study a laser operated on an actual spatial temperature gradient between pump and gain region. We predict gain and narrow band laser emission for a sufficient temperature gradient and resonator quality. Lasing appears concurrent with amplified heat flow and points to a new form of stimulated solid state cooling. Such a mechanism could raise the operating temperature limit of quantum cascade lasers by substituting phonon emission driven injection, which generates intrinsic heat, by an extended model with phonon absorption steps.
Gradient evolution for potential vorticity flows
Directory of Open Access Journals (Sweden)
S. Balasuriya
2001-01-01
Full Text Available Two-dimensional unsteady incompressible flows in which the potential vorticity (PV plays a key role are examined in this study, through the development of the evolution equation for the PV gradient. For the case where the PV is conserved, precise statements concerning topology-conservation are presented. While establishing some intuitively well-known results (the numbers of eddies and saddles is conserved, other less obvious consequences (PV patches cannot be generated, some types of Lagrangian and Eulerian entities are equivalent are obtained. This approach enables an improvement on an integrability result for PV conserving flows (if there were no PV patches at time zero, the flow would be integrable. The evolution of the PV gradient is also determined for the nonconservative case, and a plausible experiment for estimating eddy diffusivity is suggested. The theory is applied to an analytical diffusive Rossby wave example.
Scalable Kernel Methods via Doubly Stochastic Gradients
Dai, Bo; Xie, Bo; He, Niao; Liang, Yingyu; Raj, Anant; Balcan, Maria-Florina; Song, Le
2014-01-01
The general perception is that kernel methods are not scalable, and neural nets are the methods of choice for nonlinear learning problems. Or have we simply not tried hard enough for kernel methods? Here we propose an approach that scales up kernel methods using a novel concept called "doubly stochastic functional gradients". Our approach relies on the fact that many kernel methods can be expressed as convex optimization problems, and we solve the problems by making two unbiased stochastic ap...
Implementing CAIA Delay-Gradient in Linux
Jonassen, Kenneth Klette
2015-01-01
We have implemented and evaluated an independent implementation of the CAIA Delay-Gradient congestion control in the Linux operating system. We made several adjustments or improvements to the design of CDG in our implementation. We have found sources of noise in the FreeBSD implementation of CDG. We identified areas of improvement to Linux' RTT measurements for congestion control. Our results indicate that our Linux implementation can compete effectively, and that it may operate more effectiv...
Reconstructing global overturning from meridional density gradients
Butler, E. D.; Oliver, K. I. C.; Hirschi, J. J.-M.; Mecking, J. V.
2016-04-01
Despite the complexity of the global ocean system, numerous attempts have been made to scale the strength of the meridional overturning circulation (MOC), principally in the North Atlantic, with large-scale, basin-wide hydrographic properties. In particular, various approaches to scaling the MOC with meridional density gradients have been proposed, but the success of these has only been demonstrated under limited conditions. Here we present a scaling relationship linking overturning to twice vertically-integrated meridional density gradients via the hydrostatic equation and a "rotated" form of the geostrophic equation. This provides a meridional overturning streamfunction as a function of depth for each basin. Using a series of periodically forced experiments in a global, coarse resolution configuration of the general circulation model NEMO, we explore the timescales over which this scaling is temporally valid. We find that the scaling holds well in the upper Atlantic cell (at 1000 m) for multi-decadal (and longer) timescales, accurately reconstructing the relative magnitude of the response for different frequencies and explaining over 85 % of overturning variance on timescales of 64-2048 years. Despite the highly nonlinear response of the Antarctic cell in the abyssal Atlantic, between 76 and 94 % of the observed variability at 4000 m is reconstructed on timescales of 32 years (and longer). The scaling law is also applied in the Indo-Pacific. This analysis is extended to a higher resolution, stochastically forced simulation for which correlations of between 0.79 and 0.99 are obtained with upper Atlantic MOC variability on timescales >25 years. These results indicate that meridional density gradients and overturning are linked via meridional pressure gradients, and that both the strength and structure of the MOC can be reconstructed from hydrography on multi-decadal and longer timescales provided that the link is made in this way.
SPECTROSCOPIC GRADIENTS IN EARLY-TYPE GALAXIES
Directory of Open Access Journals (Sweden)
A. Buzzoni
2009-01-01
Full Text Available We review some relevant properties of the observed changes of H , Mg2, and Fei Lick indices across the surface of 25 bright elliptical galaxies. The impact of these spectroscopic gradients is brie y discussed, in the framework of the leading physical mechanisms that led to galaxy formation. In particular, three relevant evolutionary scenarios are sketched, each one able, in principle, to consistently match galaxy spectral properties and e ectively constrain the composing stellar populations in these systems.
Fluorescence correlation spectroscopy in laser gradient field
Institute of Scientific and Technical Information of China (English)
无
2001-01-01
Fluorescence correlation spectroscopy (FCS) is capable of probing dynamic processes in living biological systems. From photon fluctuation of fluorescing particles which diffuse through a small detection volume, FCS reveals information on the concentration and the structure of the particles, as well as information on microscopic environment.In this note, we study the radiation forces experienced by Rayleigh particles in a laser field in details, and analyze the effects of gradient field on FCS measurements.
Fracture driven by a Thermal Gradient
Pla, O
1995-01-01
Motivated by recent experiments by Yuse and Sano (Nature, 362, 329 (1993)), we propose a discrete model of linear springs for studying fracture in thin and elastically isotropic brittle films. The method enables us to draw a map of the stresses in the material. Cracks generated by the model, imposing a moving thermal gradient in the material, can branch or wiggle depending on the driving parameters. The results may be used to compare with other recent theoretical work, or to design future experiments.
Intergenerational and Socioeconomic Gradients of Child Obesity
Joan Costa-Fonta; Joan Gil
2012-01-01
Can the rise in obesity among children be attributed to intergenerationally parental influences? How important is a parent’s socioeconomic status in accounting for the emergence of obesity among children? This paper documents evidence of an emerging social gradient of obesity in pre-school children resulting from a combination of income and education effects, as well as less intensive childcare associated with maternal employment, when different forms of intergenerational transmission are con...
Stress gradients in CrN coatings
Janssen, G.C.A.M.; Tichelaar, F.D.; Visser, C.C.G.
2006-01-01
Stress in hard films is the net sum of tensile stress generated at the grain boundaries, compressive stress due to ion peening, and thermal stress due to the difference in thermal expansion of the coating and substrate. The tensile part due to grain boundaries is thickness dependent. The other two contributions are not thickness dependent. Summation of the three components leads to a stress gradient in the coating. In the present paper it is demonstrated that adding the three contributions me...
Quantized Concentration Gradient in Picoliter Scale
Hong, Jong Wook
2010-10-01
Generation of concentration gradient is of paramount importance in the success of reactions for cell biology, molecular biology, biochemistry, drug-discovery, chemotaxis, cell culture, biomaterials synthesis, and tissue engineering. In conventional method of conducting reactions, the concentration gradients is achieved by using pipettes, test tubes, 96-well assay plates, and robotic systems. Conventional methods require milliliter or microliter volumes of samples for typical experiments with multiple and sequential reactions. It is a challenge to carry out experiments with precious samples that have strict limitations with the amount of samples or the price to pay for the amount. In order to overcome this challenge faced by the conventional methods, fluidic devices with micrometer scale channels have been developed. These devices, however, cause restrictions on changing the concentration due to the fixed gradient set based on fixed fluidic channels.ootnotetextJambovane, S.; Duin, E. C.; Kim, S-K.; Hong, J. W., Determination of Kinetic Parameters, KM and kcat, with a Single Experiment on a Chip. textitAnalytical Chemistry, 81, (9), 3239-3245, 2009.^,ootnotetextJambovane, S.; Hong, J. W., Lorenz-like Chatotic System on a Chip In The 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS), The Netherlands, October, 2010. Here, we present a unique microfluidic system that can generate quantized concentration gradient by using series of droplets generated by a mechanical valve based injection method.ootnotetextJambovane, S.; Rho, H.; Hong, J., Fluidic Circuit based Predictive Model of Microdroplet Generation through Mechanical Cutting. In ASME International Mechanical Engineering Congress & Exposition, Lake Buena Vista, Florida, USA, October, 2009.^,ootnotetextLee, W.; Jambovane, S.; Kim, D.; Hong, J., Predictive Model on Micro Droplet Generation through Mechanical Cutting. Microfluidics and Nanofluidics, 7, (3), 431-438, 2009
Exponentiated Gradient Exploration for Active Learning
Djallel Bouneffouf
2016-01-01
Active learning strategies respond to the costly labeling task in a supervised classification by selecting the most useful unlabeled examples in training a predictive model. Many conventional active learning algorithms focus on refining the decision boundary, rather than exploring new regions that can be more informative. In this setting, we propose a sequential algorithm named exponentiated gradient (EG)-active that can improve any active learning algorithm by an optimal random exploration. ...
Fixed-Field Alternating-Gradient Accelerators
Sheehy, S. L.
2016-01-01
These notes provide an overview of Fixed-Field Alternating-Gradient (FFAG) accelerators for medical applications. We begin with a review of the basic principles of this type of accelerator, including the scaling and non-scaling types, highlighting beam dynamics issues that are of relevance to hadron ac- celerators. The potential of FFAG accelerators in the field of hadron therapy is discussed in detail, including an overview of existing medical FFAG designs. The options for FFAG treatment gan...
Optimization of ceramic strength using elastic gradients
Zhang, Yu; Ma, Li
2009-01-01
We present a new concept for strengthening ceamics by utilizing a graded structure with a low elastic modulus at both top and bottom surfaces sandwiching a high-modulus interior. Closed-form equations have been developed for stress analysis of simply supported graded sandwich beams subject to transverse center loads. Theory predicts that suitable modulus gradients at the ceramic surface can effectively reduce and spread the maximum bending stress from the surface into the interior. The magnit...
Gradient Domain Mesh Deformation - A Survey
Institute of Scientific and Technical Information of China (English)
Wei-Wei Xu; Kun Zhou
2009-01-01
This survey reviews the recent development of gradient domain mesh deformation method. Different to other deformation methods, the gradient domain deformation method is a surface-based, variational optimization method. It directly encodes the geometric details in differential coordinates, which are also called Laplacian coordinates in literature. By preserving the Laplacian coordinates, the mesh details can be well preserved during deformation. Due to the locality of the Laplacian coordinates, the variational optimization problem can be casted into a sparse linear system. Fast sparse linear solver can be adopted to generate deformation result interactively, or even in real-time. The nonlinear nature of gradient domain mesh deformation leads to the development of two categories of deformation methods: linearization methods and nonlinear optimization methods. Basically, the linearization methods only need to solve the linear least-squares system once. They are fast, easy to understand and control, while the deformation result might be suboptimal. Nonlinear optimization methods can reach optimal solution of deformation energy function by iterative updating. Since the computation of nonlinear methods is expensive, reduced deformable models should be adopted to achieve interactive performance. The nonlinear optimization methods avoid the user burden to input transformation at deformation handles, and they can be extended to incorporate various nonlinear constraints, like volume constraint, skeleton constraint, and so on. We review representative methods and related approaches of each category comparatively and hope to help the user understand the motivation behind the algorithms. Finally, we discuss the relation between physical simulation and gradient domain mesh deformation to reveal why it can achieve physically plausible deformation result.
Fixed-Field Alternating-Gradient Accelerators
Sheehy, S L
2016-01-01
These notes provide an overview of Fixed-Field Alternating-Gradient (FFAG) accelerators for medical applications. We begin with a review of the basic principles of this type of accelerator, including the scaling and non-scaling types, highlighting beam dynamics issues that are of relevance to hadron ac- celerators. The potential of FFAG accelerators in the field of hadron therapy is discussed in detail, including an overview of existing medical FFAG designs. The options for FFAG treatment gantries are also considered.
CERN/KEK: Very high accelerating gradients
International Nuclear Information System (INIS)
Full text: A world-wide effort is under way to develop linear electron-positron colliders so that physics experiments can be extended into a range of energies where circular machines (necessarily much larger than CERN's 27-kilometre LEP machine) would be crippled by synchrotron radiation. CERN is studying the feasibility of building a 2 TeV machine called CLIC powered not by individual klystrons, but by a high intensity electron 'drive' linac running parallel to the main linac (November 1990, page 7). This drive linac will itself be powered by similar superconducting cavities to those developed for LEP. A high gradient is an obvious design aim for any future high energy linear collider because it makes it shorter and therefore cheaper - the design figure for the CLIC machine is 80 MV/m. The CLIC study group has taken a significant step forward in demonstrating the technical feasibility of their machine by achieving peak and average accelerating gradients of 137 MV/m and 84 MV/m respectively in a short section of accelerating structure during high gradient tests at the Japanese KEK Laboratory last year. This result obtained within the framework of a CERN/KEK collaboration on linear colliders was obtained using a 20-cell accelerating section built at CERN using state-of the- art technology which served both as a model for CLIC studies as well as a prototype for the Japanese Linear Collider studies. The operating frequency of the model accelerating section is 2.6 times lower than the CLIC frequency but was chosen because a high power r.f. source and pulse compression scheme has been developed for this frequency at KEK. Testing CLIC models at 11.4 GHz is however more stringent than at 30 GHz because the chance of electrical breakdown increases as the frequency is lowered. This recent result clearly demonstrates that a gradient of 80 MV/m is feasible
Gradient Method Optimization of Penicillin Production
Czech Academy of Sciences Publication Activity Database
Pčolka, M.; Čelikovský, Sergej
Vol. IEEE Catalog Number: CFP1251D-CDR. Taiyuan: IEEE, 2012, s. 74-79. ISBN 978-1-4577-2072-7. [The 24th Chinese Control and Decision Conference (2012 CCDC). Taiyuan (CN), 23.05.2012-25.05.2012] R&D Projects: GA ČR(CZ) GAP103/12/1794 Institutional support: RVO:67985556 Keywords : fermentation process * penicillin * gradient method * optimization Subject RIV: BC - Control Systems Theory www.ccdc.neu.edu.cn
Intergenerational and socioeconomic gradients of childhood obesity
Costa-i-Font, Joan; Gil, Joan
2013-01-01
Can the rise in obesity among children be attributed to intergenerationally parental influences? How important is a parent’s socioeconomic status in accounting for the emergence of obesity among children? This paper documents evidence of an emerging social gradient of obesity in pre-school children resulting from a combination of income and education effects, as well as less intensive childcare associated with maternal employment, when different forms of intergenerational transmission are con...
Pedestrian Detection Using Gradient Local Binary Patterns
Jiang, Ning; Xu, Jiu; Goto, Satoshi
In recent years, local pattern based features have attracted increasing interest in object detection and recognition systems. Local Binary Pattern (LBP) feature is widely used in texture classification and face detection. But the original definition of LBP is not suitable for human detection. In this paper, we propose a novel feature named gradient local binary patterns (GLBP) for human detection. In this feature, original 256 local binary patterns are reduced to 56 patterns. These 56 patterns named uniform patterns are used for generating a 56-bin histogram. And gradient value of each pixel is set as the weight which is always same in LBP based features in histogram calculation to computing the values in 56 bins for histogram. Experiments are performed on INRIA dataset, which shows the proposal GLBP feature is discriminative than histogram of orientated gradient (HOG), Semantic Local Binary Patterns (S-LBP) and histogram of template (HOT). In our experiments, the window size is fixed. That means the performance can be improved by boosting methods. And the computation of GLBP feature is parallel, which make it easy for hardware acceleration. These factors make GLBP feature possible for real-time pedestrian detection.
Fast algorithm for integrating inconsistent gradient fields
Rivera, Mariano; Marroquin, Jose L.; Servin, Manuel; Rodriguez-Vera, Ramon
1997-11-01
A discrete Fourier transform (DFT) based algorithm for solving a quadratic cost functional is proposed; this regularized functional allows one to obtain a consistent gradient field from an inconsistent one. The calculated consistent gradient may then be integrated by use of simple methods. The technique is presented in the context of the phase-unwrapping problem; however, it may be applied to other problems, such as shapes from shading (a robot-vision technique) when inconsistent gradient fields with irregular domains are obtained. The regularized functional introduced here has advantages over existing techniques; in particular, it is able to manage complex irregular domains and to interpolate over regions with invalid data without any smoothness assumptions over the rest of the lattice, so that the estimation error is reduced. Furthermore, there are no free parameters to adjust. The DFT is used to compute a preconditioner because there is highly efficient hardware to perform the calculations and also because it may be computed by optical means.
Integrated gravity and gravity gradient 3D inversion using the non-linear conjugate gradient
Qin, Pengbo; Huang, Danian; Yuan, Yuan; Geng, Meixia; Liu, Jie
2016-03-01
Gravity data, which are critical in mineral, oil, and gas exploration, are obtained from the vertical component of the gravity field, while gravity gradient data are measured from changes in the gravity field in three directions. However, few studies have sought to improve exploration techniques by integrating gravity and gravity gradient data using inversion methods. In this study, we developed a new method to integrate gravity and gravity gradient data in a 3D density inversion using the non-linear conjugate gradient (NLCG) method and the minimum gradient support (MGS) functional to regularize the 3D inverse problem and to obtain a clear and accurate image of the anomalous body. The NLCG algorithm, which is suitable for solving large-scale nonlinear optimization problems and requires no memory storage, was compared to the Broyden-Fletcher-Goldfarb-Shanno (BFGS) quasi-Newton algorithm and the results indicated that the convergence rate of NLCG is slower, but that the storage requirement and computation time is lower. To counteract the decay in kernel function, we introduced a depth weighting function for anomalous bodies at the same depth, with information about anomalous body depth obtained from well log and seismic exploration data. For anomalous bodies at different depths, we introduced a spatial gradient weighting function to incorporate additional information obtained in the inversion. We concluded that the spatial gradient weighting function enhanced the spatial resolution of the recovered model. Furthermore, our results showed that including multiple components for inversion increased the resolution of the recovered model. We validated our model by applying our inversion method to survey data from Vinton salt dome, Louisiana, USA. The results showed good agreement with known geologic information; thus confirming the accuracy of this approach.
Institute of Scientific and Technical Information of China (English)
汪玉娇; 宝福凯; 柳爱华
2012-01-01
莱姆病是一种由伯氏疏螺旋体引起,经蜱传播的自然疫源性疾病,也是一种人兽共患病,莱姆关节炎是莱姆病的晚期临床表现,严重者可终生致残,严重影响了人们的健康和生活质量,目前,对莱姆关节炎的致病机制尚不清楚,国内外已经取得了一系列进展,但有待进一步研究.现就Toll样受体和趋化因子与莱姆关节炎发病关系的研究做一综述.%Lyme disease, which is caused by Borrelia burgdorferi and spread by ticks, is a kind of natural foci disease and parasitic zoonoses. Lyme Arthritis is the late clinical manifestation of Lyme disease, it can make patients in lifelong disability in some severe cases and seriously affect healthy and life quality of patients. Until now, We still don't understand the pathogenic mechanism of Lyme Arthritis clearly, although there is a serious progress about it at home and aboard, further study on it is necessary. This article is intent to summarize the researches on relationship between Toll-like receptor, chemotactic factor and Lyme Arthritis.
Directory of Open Access Journals (Sweden)
Maier Kevin
2006-08-01
Full Text Available Abstract Background Systemic adiponectin is reduced in patients with cardiovascular disease (CVD and low adiponectin may contribute to the pathogenesis of atherosclerosis. However, circulating adiponectin is elevated in type 1 diabetes (T1D patients, who have also a higher incidence to develop CVD. Because monocytes play an important role in atherosclerosis, we analysed the influence of adiponectin on cytokine and chemokine release in monocytes from T1D patients and controls. Methods Systemic adiponectin was determined in the plasma and the high-molecular weight (HMW form of adiponectin was analysed by immunoblot. Monocytes were isolated from T1D patients and controls and the adiponectin-stimulated release of interleukin-6 (IL-6, monocyte chemotactic protein-1 (MCP-1, CCL2 and interleukin-8 (IL-8, CXCL8 was analysed. Results Systemic adiponectin was higher in T1D patients. Immunoblot analysis of the plasma indicate abundance of HMW adiponectin in T1D patients and controls. IL-6, CCL2 and CXCL8 secretion in response to adiponectin were found induced in monocytes from controls whereas only IL-6 was upregulated in T1D cells. The induction of IL-6 by adiponectin was abrogated by an inhibitor of the NFκB pathway. Conclusion These data indicate that adiponectin-mediated induction of IL-6, CCL2 and CXCL8 is disturbed in monocytes from T1D patients and therefore elevated systemic adiponectin in T1D patients may be less protective when compared to controls.
Stability of non compact steady and expanding gradient Ricci solitons
Deruelle, Alix
2014-01-01
We study the stability of non compact steady and expanding gradient Ricci solitons. We first show that strict linear stability implies dynamical stability. Then we give various sufficient geometric conditions ensuring the strict linear stability of such gradient Ricci solitons.
Conjugate Gradient Methods with Armijo-type Line Searches
Institute of Scientific and Technical Information of China (English)
Yu-Hong DAI
2002-01-01
Two Armijo-type line searches are proposed in this paper for nonlinear conjugate gradient methods.Under these line searches, global convergence results are established for several famous conjugate gradient method.
On a classification of the quasi Yamabe gradient solitons
Huang, Guangyue; Li, Haizhong
2011-01-01
In this paper, we introduce the concept of quasi Yamabe gradient solitons, which generalizes the concept of Yamabe gradient solitons. By using some ideas in [7,8], we prove that $n$-dimensional $(n\\geq3)$ complete quasi Yamabe gradient solitons with vanishing Weyl curvature tensor and positive sectional curvature must be rotationally symmetric. We also prove that any compact quasi Yamabe gradient solitons are of constant scalar curvature.
International Nuclear Information System (INIS)
Purpose: It has been shown that oxygen gradients exist in R3230AC tumors grown in window chambers. The fascial surface is better oxygenated than the tumor surface. The purpose of the present study was to determine whether gradients exist for energy metabolites and other end points related to oxygen transport. Methods and Materials: Imaging bioluminescence was used to measure ATP, glucose, and lactate in cryosections of R3230AC tumors. Mean vessel density and hypoxic tissue fraction were assessed using immunohistochemistry. Tumor redox ratio was assessed by redox ratio scanning. Results: Lactate content and hypoxic fraction increased, whereas ATP, glucose, redox ratio, and vessel density decreased from the fascial to the tumor surface. Conclusions: The data support a switch from aerobic to anaerobic metabolism concomitant with the PO2 gradient. The vascular hypoxia that exists in perfused vessels at the tumor surface leads to macroscopic tissue regions with restricted oxygen availability and altered metabolic status. Methods to reduce tumor hypoxia may have to take this into account if such gradients exist in human tumors. The results also have implications for hypoxia imaging, because macroscopic changes in PO2 (or related parameters) will be easier to see than PO2 gradients limited to the diffusion distance of oxygen
On gradient Ricci solitons with constant scalar curvature
Fernandez-Lopez, Manuel; Garcia-Rio, Eduardo
2014-01-01
We use the theory of isoparametric functions to investigate gradient Ricci solitons with constant scalar curvature. We show rigidity of gradient Ricci solitons with constant scalar curvature under some conditions on the Ricci tensor, which are all satisfied if the manifold is curvature homogeneous. This leads to a complete description of four- and six-dimensional Kaehler gradient Ricci solitons with constant scalar curvature.
Early diabetic kidney maintains the corticomedullary urea and sodium gradient
DEFF Research Database (Denmark)
Qi, Haiyun; Nørlinger, Thomas S; Nielsen, Per M; Bertelsen, Lotte B; Mikkelsen, Emmeli; Xu, Yafang; Stødkilde Jørgensen, Hans; Laustsen, Christoffer
2016-01-01
concomitantly with a decreased sodium and urea gradient. By using hyperpolarized (13)C urea it was possible to measure the essential intrarenal electrolyte gradients and the acute changes following furosemide treatment. No differences in either intrarenal urea or sodium gradients were observed in early diabetes...
Gradient Descent Bit Flipping Algorithms for Decoding LDPC Codes
Wadayama, Tadashi; Nakamura, Keisuke; Yagita, Masayuki; Funahashi, Yuuki; Usami, Shogo; Takumi, Ichi
2007-01-01
A novel class of bit-flipping (BF) algorithms for decoding low-density parity-check (LDPC) codes is presented. The proposed algorithms, which are called gradient descent bit flipping (GDBF) algorithms, can be regarded as simplified gradient descent algorithms. Based on gradient descent formulation, the proposed algorithms are naturally derived from a simple non-linear objective function.
Biogeochemistry of a temperate forest nitrogen gradient
Perakis, Steven S.; Sinkhorn, Emily R.
2011-01-01
Wide natural gradients of soil nitrogen (N) can be used to examine fundamental relationships between plant–soil–microbial N cycling and hydrologic N loss, and to test N-saturation theory as a general framework for understanding ecosystem N dynamics. We characterized plant production, N uptake and return in litterfall, soil gross and net N mineralization rates, and hydrologic N losses of nine Douglas-fir (Pseudotsuga menziesii) forests across a wide soil N gradient in the Oregon Coast Range (USA). Surface mineral soil N (0–10 cm) ranged nearly three-fold from 0.29% to 0.78% N, and in contrast to predictions of N-saturation theory, was linearly related to 10-fold variation in net N mineralization, from 8 to 82 kg N·ha−1·yr−1. Net N mineralization was unrelated to soil C:N, soil texture, precipitation, and temperature differences among sites. Net nitrification was negatively related to soil pH, and accounted for −1·yr−1. Aboveground net primary production per unit net N mineralization varied inversely with soil N, suggesting progressive saturation of plant N demands at high soil N. Hydrologic N losses were dominated by dissolved organic N at low-N sites, with increased nitrate loss causing a shift to dominance by nitrate at high-N sites, particularly where net nitrification exceeded plant N demands. With the exception of N mineralization patterns, our results broadly support the application of the N-saturation model developed from studies of anthropogenic N deposition to understand N cycling and saturation of plant and microbial sinks along natural soil N gradients. This convergence of behavior in unpolluted and polluted forest N cycles suggests that where future reductions in deposition to polluted sites do occur, symptoms of N saturation are most likely to persist where soil N content remains elevated.
Field gradient CPMG applied on postmortem muscles.
Bertram, Hanne Christine
2004-05-01
As a new approach, Carr-Purcell-Meiboom-Gill (CPMG) experiments were performed in vitro on porcine muscles (n = 10) during the period from 15 min to 85 min postmortem and again at 24 h postmortem in the absence (G = 0) and the presence of an external field gradient (G = 0.5*10(-3) T/m), which was applied throughout the CPMG sequence. The experiments were performed on low-field nuclear magnetic resonance (NMR) equipment (0.47 T). Due to the inclusion of different pre-slaughter treatments (adrenaline treatment and pre-slaughter exercise/electrical stunning), the muscles could be divided into (I) a group (n = 5) characterized by a reduced decrease in pH postmortem and a high water-holding capacity and (II) a group (n = 5) characterized by an increased rate of pH decrease postmortem and a low water-holding capacity. Distributed analysis of the CPMG data revealed two major relaxation populations with relaxation times about 30-40 and 200-500 ms, respectively, and comparison of data obtained with G = 0 and G = 0.5*10(-3) T/m revealed effects of the external gradient on the relaxation time of both the two relaxation populations, which implies that both diffusion and relaxation contributes to the relaxation of the two populations. At 24 h postmortem the effect of the external field gradient on the relaxation time was significantly affected by muscle group (I vs. II), which reveals local differences in water diffusion in the two meat qualities. Finally, the discriminatory power with regard to muscle group (I vs. II) was investigated for data acquired with G = 0 and G = F = 0.5*10(-3) T/m, and both the two types of data were found highly suitable for separation of muscles according to meat quality. PMID:15120176
Gradient-index optics fundamentals and applications
Gomez-Reino, Carlos; Bao, Carmen
2010-01-01
Gradient-Index (GRIN) optics provides a comprehensive and thorough treatment on fundamentals and applications of light propagation through inhomogeneous media. The book can be used both as a classroom text for students in physics and engineering and as a reference for specialists. A description of the phenomena, components and technology used in GRIN Optics are presented. The relationship to lenses, waveguides, optical connections, spatial solitons and vision is demonstrated. Applications of GRIN components and hybrid structures for optical connections, optical sensing and Talbot effect are analyzed.
Human impact gradient on mammalian biodiversity
Directory of Open Access Journals (Sweden)
Mariana Munguía
2016-04-01
Full Text Available Drastic changes have been caused by human influence in natural landscapes, which may exert an intensive effect on species loss. However, species loss from human pressure is not random but depends on a series of environmentally associated factors. Linking species traits to environmental attributes may allow us to detect the ecological impacts of habitat so that meaningful habitat degradation gradients can be identified. The relationships between environmental factors and species traits provide the basis for identifying those biological traits that make species more sensitive to disturbance. These relationships are also helpful to detect the geographic distribution of latent risk to reveal areas where biodiversity is threatened. Here, we identify a “Human Impact Gradient for Biodiversity (HIGB” based on a three-table ordination method (RLQ analysis and fourth-corner analysis to identify key species traits that are associated with environmental gradient. Species distribution and environmental geographic data were gathered nationwide to analyze 68 localities, which represent 27% of Mexico’s surface, including 211 species of mammals. Nine environmental variables (including biophysical, geophysical and land-use impacts were analyzed by using the Geographic Information System. Three types of species’ traits were evaluated: locomotion, trophic habit and body size. We identified a human impact gradient, which was mainly determined by the percentage of the area that was covered by seedlings, the plant richness, the understory coverage percentage and the human settlement index. The most important species traits that are associated with non-human-impacted sites were carnivores, frugivores–herbivores and a body size that was greater than 17.8 kg; 25 species were selected by the decision criteria framework for species that were sensitive to degradation based on ecological function information. Conversely, granivores, fossorial and semifossorial
A Compact High Gradient Pulsed Magnetic Quadrupole
Shuman, Derek; Kireeff Covo, Michel; Ritchie, Gary; Seidl, Peter
2005-01-01
A design for a high gradient, low inductance pulsed quadrupole magnet is presented. The magnet is a circular current dominated design with a circular iron return yoke. Features include a five turn eddy current compensated solid conductor coil design which theoretically eliminates the first four higher order multipole field components, a single layer "non-spiral bedstead" coil design which both minimizes utilization of radial space and maximizes utilization of axial space, and allows incorporation of steering and correction coils within existing radial space. The coils are wound and stretched straight in a special winder, then bent in simple fixtures to form the upturned ends, simplifying fabrication and assembly.
The educational gradient in coronary heart disease
DEFF Research Database (Denmark)
Ariansen, Inger; Mortensen, Laust Hvas; Igland, Jannicke;
2015-01-01
BACKGROUND: Independently of cardiovascular disease (CVD) risk factors, cognitive ability may account for some of the excess risk of coronary heart disease (CHD) associated with lower education. We aimed to assess how late adolescence cognitive ability and midlife CVD risk factors are associated...... with the educational gradient in CHD in Norway. METHODS: In a cohort of 57 279 men born during 1949-1959, health survey information was linked to military conscription records of cognitive ability, to national educational data, to hospitalisation records from the Cardiovascular Disease in Norway...
Polyakov loop renormalization with gradient flow
Petreczky, Peter; Schadler, Hans-Peter
2015-01-01
We propose to use the gradient flow for the renormalization of Polyakov loops in various representations. We study Polyakov loops in 2+1 flavor QCD using the HISQ action and lattices with temporal extents $N_\\tau$=6, 8, 10 and 12 in various representations, including fundamental, sextet, adjoint, decuplet, 15-plet and 27-plet. This alternative renormalization procedure allows for the renormalization over a large temperature range from $T$=100 MeV - 800 MeV, with small errors not only for the ...
Polyakov loop renormalization with gradient flow
Petreczky, Peter
2015-01-01
We propose to use the gradient flow for the renormalization of Polyakov loops in various representations. We study Polyakov loops in 2+1 flavor QCD using the HISQ action and lattices with temporal extents $N_\\tau$=6, 8, 10 and 12 in various representations, including fundamental, sextet, adjoint, decuplet, 15-plet and 27-plet. This alternative renormalization procedure allows for the renormalization over a large temperature range from $T$=100 MeV - 800 MeV, with small errors not only for the fundamental, but also for the higher representations of the Polyakov loop. We discuss the results of this procedure and Casimir scaling of the Polyakov loop.
Latitudinal gradients in intraspecific ecological diversity
Araújo, Márcio S.; Costa-Pereira, Raul
2013-01-01
The increase in the number of species with decreasing latitude is a striking pattern of global biodiversity. An important feature of studies of this pattern up to now has been the focus on species as the fundamental unit of interest, neglecting potential within-species ecological diversity. Here, we took a new perspective on this topic by measuring the degree to which individuals within populations differ in niche attributes across a latitudinal gradient (range: 54.01° S to 69.12° N). We show...
Aceros al molibdeno sinterizados con gradiente funcional
Cisneros Belmonte, Manuel; Ruiz Román, José Manuel; Sánchez Fernández, Miguel; García Cambronero, Luis Enrique
2014-01-01
Las propiedades que se solicitan a las piezas y productos exigen, la mayoría de las veces, una combinación de materiales que respondan a requerimientos específicos en función de su posición. La fabricación de materiales compuestos y materiales con gradiente funcional proporciona grandes posibilidades de respuesta a las necesidades demandas, tanto de satisfacción de requerimientos como de reducción de materias primas necesarias. En este sentido, satisfacer las propiedades demandadas, de manera...
Laser pulse shaping for high gradient accelerators
Villa, F.; Anania, M. P.; Bellaveglia, M.; Bisesto, F.; Chiadroni, E.; Cianchi, A.; Curcio, A.; Galletti, M.; Di Giovenale, D.; Di Pirro, G.; Ferrario, M.; Gatti, G.; Moreno, M.; Petrarca, M.; Pompili, R.; Vaccarezza, C.
2016-09-01
In many high gradient accelerator schemes, i.e. with plasma or dielectric wakefield induced by particles, many electron pulses are required to drive the acceleration of one of them. Those electron bunches, that generally should have very short duration and low emittance, can be generated in photoinjectors driven by a train of laser pulses coming inside the same RF bucket. We present the system used to shape and characterize the laser pulses used in multibunch operations at Sparc_lab. Our system gives us control over the main parameter useful to produce a train of up to five high brightness bunches with tailored intensity and time distribution.
Stereo vision with distance and gradient recognition
Kim, Soo-Hyun; Kang, Suk-Bum; Yang, Tae-Kyu
2007-12-01
Robot vision technology is needed for the stable walking, object recognition and the movement to the target spot. By some sensors which use infrared rays and ultrasonic, robot can overcome the urgent state or dangerous time. But stereo vision of three dimensional space would make robot have powerful artificial intelligence. In this paper we consider about the stereo vision for stable and correct movement of a biped robot. When a robot confront with an inclination plane or steps, particular algorithms are needed to go on without failure. This study developed the recognition algorithm of distance and gradient of environment by stereo matching process.
Method of thermal derivative gradient analysis (TDGA
Directory of Open Access Journals (Sweden)
M. Cholewa
2009-07-01
Full Text Available In this work a concept of thermal analysis was shown, using for crystallization kinetics description the temperature derivatives after time and direction. Method of thermal derivative gradient analysis (TDGA is assigned for alloys and metals investigation as well as cast composites in range of solidification. The construction and operation characteristics were presented for the test stand including processing modules and probes together with thermocouples location. Authors presented examples of results interpretation for AlSi11 alloy castings with diversified wall thickness and at different pouring temperature.
Collisionless trapped ion temperature gradient instabilities
International Nuclear Information System (INIS)
Under the fluid limit, the collisionless trapped ion temperature gradient instabilities with eigenfrequency approaching to ion bounce frequency are investigated by retaining the trapped ion parallel compressibility in the electrostatic case. The unstable eigenmodes are shown in entire range of parameter b. There exists a local unstable slab branch with a moderate ballooning structure at the relatively short wavelengths. Meanwhile, two nonlocal unstable branches, toroidal and slab, with mode structures of periodic oscillation overlapping on a secular variation are found in the relatively long wavelength limit. These unstable modes' eigenfrequencies, propagating properties, and eigenmode structures are given analytically and numerically. The numerical results are in good agreement with the analytical ones. (5 figs.)
Tunable high-gradient permanent magnet quadrupoles
International Nuclear Information System (INIS)
A novel type of highly tunable permanent magnet (PM) based quadrupole has been designed by the ZEPTO collaboration. A prototype of the design (ZEPTO-Q1), intended to match the specification for the CLIC Drive Beam Decelerator, was built and magnetically measured at Daresbury Laboratory and CERN. The prototype utilises two pairs of PMs which move in opposite directions along a single vertical axis to produce a quadrupole gradient variable between 15 and 60 T/m. The prototype meets CLIC's challenging specification in terms of the strength and tunability of the magnet
Online Learning, Stability, and Stochastic Gradient Descent
Poggio, Tomaso; Rosasco, Lorenzo
2011-01-01
In batch learning, stability together with existence and uniqueness of the solution corresponds to well-posedness of Empirical Risk Minimization (ERM) methods; recently, it was proved that CV_loo stability is necessary and sufficient for generalization and consistency of ERM. In this note, we introduce CV_on stability, which plays a similar note in online learning. We show that stochastic gradient descent (SDG) with the usual hypotheses is CVon stable and we then discuss the implications of CV_on stability for convergence of SGD.
Mass balance gradients and climatic change
Oerlemans, J.; Hoogendoorn, N.C.
1989-01-01
It is generally assumed that the mass-balance gradient on glaciers is more or less conserved under climatic change. In studies of the dynamic response of glaciers to climatic change, one of the following assumptions is normally made: (i) the mass-balance perturbation is independent of altitude or (ii) the mass-balance profile does not change - it simply shifts up and down. Observational evidence for such an approach is not convincing; on some glaciers the inter-annual changes in mass balance ...
High gradient experiments on NLCTA accelerator structures
International Nuclear Information System (INIS)
This paper presents new results of high-gradient studies performed on a 1.8 m traveling-wave accelerator section with detuned high-order deflecting modes. This structure was designed initially for studies of detuned structures and will be installed in the Next Linear Collider Test Accelerator (NLCTA). The paper describes the test set-up in the Accelerator Structure Test Area (ASTA) including electron gun, prebuncher, pre-accelerator, spectrometer, Faraday cups, 200 MW SLED-II power compression system, Magic-T type phase shifters and attenuators. Rf processing, detailed dark current analysis, radiation problems, and beam acceleration measurements are discussed
Goelman, Gadi; Pelled, Galit; Dodd, Steve; Koretsky, Alan
2008-01-01
A unique method to map the effect of crusher gradients in space and time on the gradient echo BOLD signal is introduced. Using the Radial Correlation Contrast (RCC) analysis method, amplitude-RCC maps at different time segments and different gradient strengths were obtained. The ratio of amplitude-RCC cluster volumes, with and without crusher gradients, showed a temporal dependency with stronger volume reduction for stimulation-onset versus stimulation-decline. Aside from SNR reduction in dif...
Role of the vertical pressure gradient in wave boundary layers
DEFF Research Database (Denmark)
Jensen, Karsten Lindegård; Sumer, B. Mutlu; Vittori, Giovanna;
2014-01-01
By direct numerical simulation (DNS) of the flow in an oscillatory boundary layer, it is possible to obtain the pressure field. From the latter, the vertical pressure gradient is determined. Turbulent spots are detected by a criterion involving the vertical pressure gradient. The vertical pressure...... gradient is also treated as any other turbulence quantity like velocity fluctuations and statistical properties of the vertical pressure gradient are calculated from the DNS data. The presence of a vertical pressure gradient in the near bed region has significant implications for sediment transport....
Intergenerational and socioeconomic gradients of child obesity.
Costa-Font, Joan; Gil, Joan
2013-09-01
Can the rise in obesity among children be attributed to the intergenerational transmission of parental influences? Does this trend affect the influence of parent's socioeconomic status on obesity? This paper documents evidence of an emerging social gradient of obesity in pre-school children resulting from a combination of both socio-economic status and less intensive childcare associated with maternal employment, when different forms of intergenerational transmission are controlled for. We also estimate and decompose income related inequalities in child obesity. We take advantage of a uniquely constructed dataset from Spain that contains records form 13,358 individuals for a time period (years 2003-2006) in which a significant spike in the growth of child obesity was observed. Our results suggest robust evidence of both socioeconomic and intergenerational gradients. Results are suggestive of a high income effect in child obesity, alongside evidence that income inequalities have doubled in just three years with a pure income effect accounting for as much as 72-66% of these income inequality estimates, even when intergenerational transmission is accounted for. Although, intergenerational transmission does not appear to be gender specific, when accounted for, mother's labour market participation only explains obesity among boys but not among girls. Hence, it appears income and parental influences are the central determinants of obesity among children. PMID:23906118
Spatial temperature gradients guide axonal outgrowth
Black, Bryan; Vishwakarma, Vivek; Dhakal, Kamal; Bhattarai, Samik; Pradhan, Prabhakar; Jain, Ankur; Kim, Young-Tae; Mohanty, Samarendra
2016-07-01
Formation of neural networks during development and regeneration after injury depends on accuracy of axonal pathfinding, which is primarily believed to be influenced by chemical cues. Recently, there is growing evidence that physical cues can play crucial role in axonal guidance. However, detailed mechanism involved in such guidance cues is lacking. By using weakly-focused near-infrared continuous wave (CW) laser microbeam in the path of an advancing axon, we discovered that the beam acts as a repulsive guidance cue. Here, we report that this highly-effective at-a-distance guidance is the result of a temperature field produced by the near-infrared laser light absorption. Since light absorption by extracellular medium increases when the laser wavelength was red shifted, the threshold laser power for reliable guidance was significantly lower in the near-infrared as compared to the visible spectrum. The spatial temperature gradient caused by the near-infrared laser beam at-a-distance was found to activate temperature-sensitive membrane receptors, resulting in an influx of calcium. The repulsive guidance effect was significantly reduced when extracellular calcium was depleted or in the presence of TRPV1-antagonist. Further, direct heating using micro-heater confirmed that the axonal guidance is caused by shallow temperature-gradient, eliminating the role of any non-photothermal effects.
Research on creation of functionally gradient materials
International Nuclear Information System (INIS)
Heat and thermal stress analysis of functionally gradient materials (FGM) was carried out using 'FINAS' under two kinds of heating environment. FINAS which was developed by PNC is one of finite element analysis methods. The magnitude of induced thermal stress in ceramic-rich FGM which was superior in thermal shielding property was smaller than that in metal-rich FGM under high temperature gradient field. The magnitude of releasing thermal stress in metal-rich FGM was larger than that in ceramic-rich FGM under high heat flux field. The trial production of disk type FGM was performed by mechanical alloying and vacuum plasma arc sintering method (MA/VPS). Only the metal-rich type FGM of Al2O3/SUS316 was produced using the proposed multiple-sintering process. However, it was difficult to produce Si3N4/SUS316 and SiC/SUS316 FGM, because there were many cracks in FGM after the sintering. (author)
Ultrafast Drop Movements Arising from Curvature Gradient
Lv, Cunjing; Chuang, Yin-Chuan; Tseng, Fan-Gang; Yin, Yajun; Zheng, Quanshui
2011-01-01
We report experimental observation of a kind of fast spontaneous movements of water drops on surfaces of cones with diameters from 0.1 to 1.5 mm. The observed maximum speed (0.22 m/s) under ambient conditions were at least two orders of magnitude higher than that resulting from any known single spontaneous movement mechanism, for example, Marangoni effect due to gradient of surface tension. We trapped even higher spontaneous movement speeds (up to 125 m/s) in virtual experiments for drops on nanoscale cones by using molecular dynamics simulations. The underlying mechanism is found to be universally effective - drops on any surface either hydrophilic or hydrophobic with varying mean curvature are subject to driving forces toward the gradient direction of the mean curvature. The larger the mean curvature of the surface and the lower the contact angle of the liquid are, the stronger the driving force will be. This discovery can lead to more effective techniques for transporting droplets.
Mass Transfer Along a Temperature Gradient
International Nuclear Information System (INIS)
This paper reviews the fundamental understanding of the processes of mass transfer in solids subjected to a temperature gradient. The phenomenological description of these processes depends upon a knowledge of parameters called ''heats of transport'' as well as (chemical) diffusion coefficients. The description of the Soret effect and the influence of a temperature gradient upon chemical diffusion are discussed in these terms. Although there is good knowledge of diffusion coefficients and, in many examples, also a clear understanding of these in terms of underlying atomic processes, this is not true of heats of transport. Simple kinetic arguments have often led people to suppose that heats of transport will be largely independent of temperature and equal to or less than the heats of activation for the relevant atomic displacement jump. Recent experimental results on (i) heats of transport of interstitial solutes in metals and (ii) intrinsic heats of transport in pure metals and ionic crystals are reviewed here and show that these expectations are wrong. Heats of transport in these systems show an unexpected temperature dependence and their magnitude may be greater than the corresponding heats of activation. The theoretical problem of describing these results in terms of crystal lattice dynamics has, so far, eluded solution. (author)
Optimization of ceramic strength using elastic gradients.
Zhang, Yu; Ma, Li
2009-05-01
We present a new concept for strengthening ceamics by utilizing a graded structure with a low elastic modulus at both top and bottom surfaces sandwiching a high-modulus interior. Closed-form equations have been developed for stress analysis of simply supported graded sandwich beams subject to transverse center loads. Theory predicts that suitable modulus gradients at the ceramic surface can effectively reduce and spread the maximum bending stress from the surface into the interior. The magnitude of such stress dissipation is governed by the thickness ratio of the beam to the graded layers. We test our concept by infiltrating both top and bottom surfaces of a strong class of zirconia ceramic with an in-house prepared glass of similar coefficient of thermal expansion and Poisson's ratio to zirconia, producing a controlled modulus gradient at the surface without significant long-range residual stresses. The resultant graded glass/zirconia/glass composite exhibits significantly higher load-bearing capacity than homogeneous zirconia. PMID:20161019
The multigrid preconditioned conjugate gradient method
Tatebe, Osamu
1993-01-01
A multigrid preconditioned conjugate gradient method (MGCG method), which uses the multigrid method as a preconditioner of the PCG method, is proposed. The multigrid method has inherent high parallelism and improves convergence of long wavelength components, which is important in iterative methods. By using this method as a preconditioner of the PCG method, an efficient method with high parallelism and fast convergence is obtained. First, it is considered a necessary condition of the multigrid preconditioner in order to satisfy requirements of a preconditioner of the PCG method. Next numerical experiments show a behavior of the MGCG method and that the MGCG method is superior to both the ICCG method and the multigrid method in point of fast convergence and high parallelism. This fast convergence is understood in terms of the eigenvalue analysis of the preconditioned matrix. From this observation of the multigrid preconditioner, it is realized that the MGCG method converges in very few iterations and the multigrid preconditioner is a desirable preconditioner of the conjugate gradient method.
Infinite-Horizon Policy-Gradient Estimation
Bartlett, P L; 10.1613/jair.806
2011-01-01
Gradient-based approaches to direct policy search in reinforcement learning have received much recent attention as a means to solve problems of partial observability and to avoid some of the problems associated with policy degradation in value-function methods. In this paper we introduce GPOMDP, a simulation-based algorithm for generating a biased estimate of the gradient of the average reward in Partially Observable Markov Decision Processes POMDPs controlled by parameterized stochastic policies. A similar algorithm was proposed by (Kimura et al. 1995). The algorithm's chief advantages are that it requires storage of only twice the number of policy parameters, uses one free beta (which has a natural interpretation in terms of bias-variance trade-off), and requires no knowledge of the underlying state. We prove convergence of GPOMDP, and show how the correct choice of the parameter beta is related to the mixing time of the controlled POMDP. We briefly describe extensions of GPOMDP to controlled Markov chains,...
A substrate independent approach for generation of surface gradients
International Nuclear Information System (INIS)
Recently, surface gradients have attracted significant interest for various research and technological applications. In this paper, we report a facile and versatile method for generating surface gradients of immobilized nanoparticles, nanotopography and ligands that is independent from the substrate material. The method consists of first depositing a functional polymer layer on a substrate and subsequent time controlled immersion of this functionalized substrate in solution gold nanoparticles (AuNPs), silver nanoparticles (AgNPs) or poly (styrenesulfonate) (PSS). Chemical characterization by X-ray Photoelectron Spectroscopy (XPS) and morphological analysis by Atomic Force Microscopy (AFM) show that the density of nanoparticles and the concentration of PSS across the surface increases in a gradient manner. As expected, time of immersion determines the concentration of surface bound species. We also demonstrate the generation of surface gradients of pure nanotopography. This is achieved by depositing a 5 nm thick plasma polymer layer on top of the number density gradient of nanoparticles to achieve a homogeneous surface chemistry. The surface independent approach for generation of surface gradients presented in this paper may open opportunities for a wider use of surface gradient in research and in various technologies. - Highlights: ► We present a substrate independent approach for generation of surface gradients. ► We demonstrate well-defined density gradients of gold and silver nanoparticles. ► We provide an example of pure surface nanotopography gradients. ► We demonstrate concentration gradients of bound ligands
A substrate independent approach for generation of surface gradients
Energy Technology Data Exchange (ETDEWEB)
Goreham, Renee V. [Mawson Institute, University of South Australia, Mawson Lakes 5095 (Australia); Mierczynska, Agnieszka; Pierce, Madelene [Ian Wark Research Institute, University of South Australia, Mawson Lakes 5095 (Australia); Short, Robert D.; Taheri, Shima; Bachhuka, Akash; Cavallaro, Alex; Smith, Louise E. [Mawson Institute, University of South Australia, Mawson Lakes 5095 (Australia); Vasilev, Krasimir, E-mail: krasimir.vasilev@unisa.edu.au [Mawson Institute, University of South Australia, Mawson Lakes 5095 (Australia)
2013-01-01
Recently, surface gradients have attracted significant interest for various research and technological applications. In this paper, we report a facile and versatile method for generating surface gradients of immobilized nanoparticles, nanotopography and ligands that is independent from the substrate material. The method consists of first depositing a functional polymer layer on a substrate and subsequent time controlled immersion of this functionalized substrate in solution gold nanoparticles (AuNPs), silver nanoparticles (AgNPs) or poly (styrenesulfonate) (PSS). Chemical characterization by X-ray Photoelectron Spectroscopy (XPS) and morphological analysis by Atomic Force Microscopy (AFM) show that the density of nanoparticles and the concentration of PSS across the surface increases in a gradient manner. As expected, time of immersion determines the concentration of surface bound species. We also demonstrate the generation of surface gradients of pure nanotopography. This is achieved by depositing a 5 nm thick plasma polymer layer on top of the number density gradient of nanoparticles to achieve a homogeneous surface chemistry. The surface independent approach for generation of surface gradients presented in this paper may open opportunities for a wider use of surface gradient in research and in various technologies. - Highlights: ► We present a substrate independent approach for generation of surface gradients. ► We demonstrate well-defined density gradients of gold and silver nanoparticles. ► We provide an example of pure surface nanotopography gradients. ► We demonstrate concentration gradients of bound ligands.
Geothermal gradients in the steen river area of Northwestern Alberta
Jones, F. W.; Lam, H. L.
1984-03-01
A total of 6540 bottom-hole temperature values from 1879 petroleum exploration wells in northwestern Alberta in the region 57°N-60°N and 114°W-120°W have been used to estimate temperature gradients there. A thermal gradient contour map constructed for the region shows a number of local high geothermal gradient areas. Comparison with available aeromagnetic and gravity maps indicates that a high geothermal gradient near Steen River is probably associated with an igneous intrusion and that nearby high geothermal gradient areas may be due to the transport of heat away from the basement by upward and lateral water motion. Also, it is noted that, in this region of Alberta, oil field locations appear to coincide with areas of low geothermal gradient, whereas gas fields appear to coincide with high geothermal gradients.
Tracing the vertical composition of disc galaxies through colour gradients
De Grijs, R; Grijs, Richard de; Peletier, Reynier F.
1999-01-01
(Abbreviated) Optical observations of a statistically complete sample of edge-on disc galaxies are used to study the intrinsic vertical colour gradients in the galactic discs, to constrain the effects of population gradients, residual dust extinction and gradients in the galaxies' metal abundance. It appears that the intrinsic vertical colour gradients are either non-existent, or small and relatively constant as a function of position along the galaxies' major axes. Our results are consistent with the absence of any vertical colour gradient in the discs of the early-type sample galaxies. In most galaxies small-scale variations in the magnitude and even the direction of the vertical gradient are observed: at larger galactocentric distances they generally display redder colours with increasing z height, whereas the opposite is often observed in and near the galactic centres. For a significant fraction of our sample galaxies another mechanism in addition to the effects of stellar population gradients is required...
Evaluation of gravitational gradients generated by Earth's crustal structures
Novák, Pavel; Tenzer, Robert; Eshagh, Mehdi; Bagherbandi, Mohammad
2013-02-01
Spectral formulas for the evaluation of gravitational gradients generated by upper Earth's mass components are presented in the manuscript. The spectral approach allows for numerical evaluation of global gravitational gradient fields that can be used to constrain gravitational gradients either synthesised from global gravitational models or directly measured by the spaceborne gradiometer on board of the GOCE satellite mission. Gravitational gradients generated by static atmospheric, topographic and continental ice masses are evaluated numerically based on available global models of Earth's topography, bathymetry and continental ice sheets. CRUST2.0 data are then applied for the numerical evaluation of gravitational gradients generated by mass density contrasts within soft and hard sediments, upper, middle and lower crust layers. Combined gravitational gradients are compared to disturbing gravitational gradients derived from a global gravitational model and an idealised Earth's model represented by the geocentric homogeneous biaxial ellipsoid GRS80. The methodology could be used for improved modelling of the Earth's inner structure.
Experiments with Infinite-Horizon, Policy-Gradient Estimation
Bartlett, P L; Weaver, L; 10.1613/jair.807
2011-01-01
In this paper, we present algorithms that perform gradient ascent of the average reward in a partially observable Markov decision process (POMDP). These algorithms are based on GPOMDP, an algorithm introduced in a companion paper (Baxter and Bartlett, this volume), which computes biased estimates of the performance gradient in POMDPs. The algorithm's chief advantages are that it uses only one free parameter beta, which has a natural interpretation in terms of bias-variance trade-off, it requires no knowledge of the underlying state, and it can be applied to infinite state, control and observation spaces. We show how the gradient estimates produced by GPOMDP can be used to perform gradient ascent, both with a traditional stochastic-gradient algorithm, and with an algorithm based on conjugate-gradients that utilizes gradient information to bracket maxima in line searches. Experimental results are presented illustrating both the theoretical results of (Baxter and Bartlett, this volume) on a toy problem, and prac...
Development of high-gradient and open-gradient magnetic separation
Energy Technology Data Exchange (ETDEWEB)
Hise, E C
1981-01-01
This paper was prepared: to review the accomplishments in both high-gradient magnetic separation (HGMS) and open-gradient magnetic separation (OGMS) by the Oak Ridge National Laboratory (ORNL) group during the past three years; to show, through the medium of motion pictures, the operation of the various separation methods and devices used and developed; to show qualitative results of the separation performed; and to make available, to those interested, detailed reports of the experimental procedures and the resulting data. The qualitative separation of pyritic sulfur and ash forming minerals from fine coal by high gradient magnetic separation has been demonstrated at feed rates up to one ton per hour, and in a machine that is commercially produced in sizes for feed rates up to several hundred tons per hour. The quantitative separation of pyritic sulfur and ash forming minerals from fine coal by free fall open gradient magnetic separation has been demonstrated at a laboratory scale and at 300 kg per hour in a solenoidal magnet configuration. A magnet modeling analysis has shown that an optimum magnet can be designed with practical physical constraints which can generate separating forces two to three times those of the existing solenoidal configuration and with a large processing capacity. The analytical predictions of the behavior of particles traversing these separating forces have been experimentally confirmed within 15% in existing magnets.
Maudsley, D J; Morris, A G
1987-06-01
The dye fura-2, a potentially more sensitive successor to quin2 for measuring intracellular free calcium ion concentrations [(Ca2+]i), has been applied here to investigate the possible involvement of early changes in [Ca2+]i in the stimulation of the human monocyte-macrophage-like cell line U937. The calcium ionophores A23187 and ionomycin, known pharmacological stimuli for macrophages, were found to cause sharp rises in [Ca2+]i as expected. Responses analogous to those reported for a murine macrophage cell (J774) were obtained on stimulation of U937 cells with ATP which caused rapid, but transient, increases in [Ca2+]i (from resting levels of about 70 nM to peaks of about 200 mM). In addition to ATP, several agents known to activate macrophages were used as stimuli. In particular, platelet-activating factor (PAF; 1-0-alkyl-2-acetyl-sn-glycero-3-phosphocholine) was found to cause rapid, but transient, increases in [Ca2+]i (from resting levels of about 70 nM to peaks of about 400 nM) even at concentrations as low as 10(-10) M. This contrasts with responses to ATP that were markedly reduced at 10(-6) M compared with 10(-5) M or above, suggesting that PAF is a highly potent stimulus for intracellular calcium mobilization in macrophages. Similar responses were obtained with chemotactic peptide (N-formyl-methionyl-leucyl-phenylalanine). On the other hand, two agents known to be potent activators of macrophages, interferon gamma and lipopolysaccharide, had no rapid effect on [Ca2+]i. This may reflect differences in the kinetics of signal-response coupling or alternatively a different mechanism of action by-passing the need for rapid elevation of [Ca2+]i. PMID:3110054
Finite sample effect in temperature gradient focusing.
Lin, Hao; Shackman, Jonathan G; Ross, David
2008-06-01
Temperature gradient focusing (TGF) is a new and promising equilibrium gradient focusing method which can provide high concentration factors for improved detection limits in combination with high-resolution separation. In this technique, temperature-dependent buffer chemistry is employed to generate a gradient in the analyte electrophoretic velocity. By the application of a convective counter-flow, a zero-velocity point is created within a microchannel, at which location the ionic analytes accumulate or focus. In general, the analyte concentration is small when compared with buffer ion concentrations, such that the focusing mechanism works in the ideal, linearized regime. However, this presumption may at times be violated due to significant sample concentration growth or the use of a low-concentration buffer. Under these situations the sample concentration becomes non-negligible and can induce strong nonlinear interactions with buffer ions, which eventually lead to peak shifting and distortion, and the loss of detectability and resolution. In this work we combine theory, simulation, and experimental data to present a detailed study on nonlinear sample-buffer interactions in TGF. One of the key results is the derivation of a generalized Kohlrausch regulating function (KRF) that is valid for systems in which the electrophoretic mobilities are not constant but vary spatially. This generalized KRF greatly facilitates analysis, allowing reduction of the problem to a single equation describing sample concentration evolution, and is applicable to other problems with heterogeneous electrophoretic mobilities. Using this sample evolution equation we have derived an understanding of the nonlinear peak deformation phenomenon observed experimentally in TGF. We have used numerical simulations to validate our theory and to quantitatively predict TGF. Our simulation results demonstrate excellent agreement with experimental data, and also indicate that the proper inclusion of
High Gradient Wakefields in Dielectric Loaded Structures
International Nuclear Information System (INIS)
Dielectric loaded wakefield structures have potential to be used as high gradient accelerator components. Using the high current drive beam at the Argonne Wakefield Accelerator Facility, we employed cylindrical dielectric loaded wakefield structures to generate accelerating fields of up to 86 MV/m, at 10 GHz. Short electron bunches of up to 86 nC are used to drive these fields, either as single bunches or as bunch trains. The structures consist of cylindrical ceramic tubes (cordierite) with a dielectric constant of 4.76, inserted into cylindrical copper waveguides. These standing-wave structures have a field probe near the outer diameter of the dielectric, in order to sample the RF fields generated by the electron bunches. Monitoring the field probe signal serves to verify the absence of electric breakdown in the structures. MAFIA simulations are used to calculate the amplitude of the fields generated by the traversing electrons bunches
Gravity Gradient Tensor Eigendecomposition for Spacecraft Positioning
Chen, Pei; Han, Chao
2016-01-01
In this Note, a new approach to spacecraft positioning based on GGT inversion is presented. The gravity gradient tensor is initially measured in the gradiometer reference frame (GRF) and then transformed to the Earth-Centered Earth-Fixed (ECEF) frame via attitude information as well as Earth rotation parameters. Matrix Eigen-Decomposition is introduced to directly translate GGT into position based on the fact that the eigenvalues and eigenvectors of GGT are simplespecific functions of spherical coordinates of the observation position. without the need of an initial position. Unlike the strategy of inertial navigation aiding, no prediction or first guess of the spacecraft position is needed. The method makes use of the J2 gravity model, and is suitable for space navigation where higher frequency terrain contributions to the GGT signals can be neglected.
Dual-rail optical gradient echo memory
Higginbottom, Daniel B; Campbell, Geoff T; Hosseini, Mahdi; Cao, Ming Tao; Sparkes, Ben M; Bernu, Julian; Robins, Nick P; Lam, Ping Koy; Buchler, Ben C
2016-01-01
We introduce a scheme for the parallel storage of frequency separated signals in an optical memory and demonstrate that this dual-rail storage is a suitable memory for high fidelity frequency qubits. The two signals are stored simultaneously in the Zeeman-split Raman absorption lines of a cold atom ensemble using gradient echo memory techniques. Analysis of the split-Zeeman storage shows that the memory can be configured to preserve the relative amplitude and phase of the frequency separated signals. In an experimental demonstration dual-frequency pulses are recalled with 35% efficiency, 82% interference fringe visibility, and 6 degrees phase stability. The fidelity of the frequency-qubit memory is limited by frequency-dependent polarisation rotation and ambient magnetic field fluctuations, our analysis describes how these can be addressed in an alternative configuration.
Nonlinear analysis of the gradient drift instability
González, Rafael; Vega, Matías de la
An analytical study of the gradient drift instability in the equatorial electrojet of wavelengths in the order of one kilometer is presented. Different mechanisms, linear, non-local and turbulent, are found in the literature to explain the predominance of the 1 km wavelength in the electrojet. In the present work a simplified model is proposed in which the nonlinear evolution of three coupled modes is followed. By considering that one of the modes attains the stationary state, the evolution of the other two is obtained, and it is found that they follow equations of the Lotka-Volterra type. A stable stationary nonlinear solution for these equations is also found, and the conditions under which periodic solutions are possible are analyzed.
Accelerated gradient methods for constrained image deblurring
International Nuclear Information System (INIS)
In this paper we propose a special gradient projection method for the image deblurring problem, in the framework of the maximum likelihood approach. We present the method in a very general form and we give convergence results under standard assumptions. Then we consider the deblurring problem and the generality of the proposed algorithm allows us to add a energy conservation constraint to the maximum likelihood problem. In order to improve the convergence rate, we devise appropriate scaling strategies and steplength updating rules, especially designed for this application. The effectiveness of the method is evaluated by means of a computational study on astronomical images corrupted by Poisson noise. Comparisons with standard methods for image restoration, such as the expectation maximization algorithm, are also reported.
'Thermal forces': colloids in temperature gradients
Piazza, Roberto
2004-09-01
In the presence of a thermal gradient, macromolecular solutes or dispersed particles drift to the cold or to the hot side: this effect is known as thermophoresis, and is the counterpart of particle suspensions of the Soret effect (or thermal diffusion) in simple fluid mixtures. Here I review recent experimental results on colloid thermophoresis and present new data suggesting a universal nature for the temperature dependence of thermophoresis in aqueous systems. There are strong analogies between thermophoresis in liquids and other thermally induced flow processes like gas thermal creep and membrane thermo-osmosis; starting from these, I present some guidelines for a general model of thermophoresis in disperse systems, accounting both for single-particle and collective effects.
A Gradient Descent Approximation for Graph Cuts
Yildiz, Alparslan; Akgul, Yusuf Sinan
Graph cuts have become very popular in many areas of computer vision including segmentation, energy minimization, and 3D reconstruction. Their ability to find optimal results efficiently and the convenience of usage are some of the factors of this popularity. However, there are a few issues with graph cuts, such as inherent sequential nature of popular algorithms and the memory bloat in large scale problems. In this paper, we introduce a novel method for the approximation of the graph cut optimization by posing the problem as a gradient descent formulation. The advantages of our method is the ability to work efficiently on large problems and the possibility of convenient implementation on parallel architectures such as inexpensive Graphics Processing Units (GPUs). We have implemented the proposed method on the Nvidia 8800GTS GPU. The classical segmentation experiments on static images and video data showed the effectiveness of our method.
Adaptive Photon Mapping Based on Gradient
Institute of Scientific and Technical Information of China (English)
Chun-Meng Kang; Lu Wang; Yan-Ning Xu; Xiang-Xu Meng; Yuan-Jie Song
2016-01-01
Photon mapping can simulate some special effects eﬃciently such as shadows and caustics. Photon mapping runs in two phases: the photon map generating phase and the radiance estimation phase. In this paper, we focus on the bandwidth selection process in the second phase, as it can affect the final quality significantly. Poor results with noise arise if few photons are collected, while bias appears if a large number of photons are collected. In order to solve this issue, we propose an adaptive radiance estimation solution to obtain trade-offs between noise and bias by changing the number of neighboring photons and the shape of the collected area according to the radiance gradient. Our approach can be applied in both the direct and the indirect illumination computation. Finally, experimental results show that our approach can produce smoother quality while keeping the high frequency features perfectly compared with the original photon mapping algorithm.
Toroidal electron temperature gradient drive drift modes
International Nuclear Information System (INIS)
The electron temperature gradient in tokamak geometry is shown to drive a short wavelength lower hybrid drift wave turbulence due to the unfavorable magnetic curvature on the outside of the torus. Ballooning mode theory is used to determine the stability regimes and the complex eigenfrequencies. At wavelengths of order the electron gyroradius the polarization is electrostatic and the growth rate is greater than the electron transit time aroud the torus. At longer wavelengths of order the collisionless skin depth the polarization is electromagnetic with electromagnetic vortices producing the dominant transport. The small scale electrostatic component of the turbulence produces a small by (m/sub e/m/sub i/)/sup 1/2/ drift wave anomalous transport of both the trapped and passing electrons while the c/ω/sub pe/ scale turbulene produces a neo-Alcator type transport from the stochastic diffusion of the trapped electrons. 15 refs., 5 figs
Fano resonances from gradient-index metamaterials
Xu, Yadong; Li, Sucheng; Hou, Bo; Chen, Huanyang
2016-01-01
Fano resonances - resonant scattering features with a characteristic asymmetric profile - have generated much interest, due to their extensive and valuable applications in chemical or biological sensors, new types of optical switches, lasers and nonlinear optics. They have been observed in a wide variety of resonant optical systems, including photonic crystals, metamaterials, metallic gratings and nanostructures. In this work, a waveguide structure is designed by employing gradient-index metamaterials, supporting strong Fano resonances with extremely sharp spectra. As the changes in the transmission spectrum originate from the interaction of guided modes from different channels, instead of resonance structures or metamolecules, the Fano resonances can be observed for both transverse electric and transverse magnetic polarizations. These findings are verified by fine agreement with analytical calculations and experimental results at microwave, as well as simulated results at near infrared frequencies.
Model predictive control for wind power gradients
DEFF Research Database (Denmark)
Hovgaard, Tobias Gybel; Boyd, Stephen; Jørgensen, John Bagterp
2015-01-01
We consider the operation of a wind turbine and a connected local battery or other electrical storage device, taking into account varying wind speed, with the goal of maximizing the total energy generated while respecting limits on the time derivative (gradient) of power delivered to the grid. We...... use the turbine inertia as an additional energy storage device, by varying its speed over time, and coordinate the flows of energy to achieve the goal. The control variables are turbine pitch, generator torque and charge/discharge rates for the storage device, each of which can be varied over given...... ranges. The system dynamics are quite non-linear, and the constraints and objectives are not convex functions of the control inputs, so the resulting optimal control problem is difficult to solve globally. In this paper, we show that by a novel change of variables, which focuses on power flows, we can...
Eigen-Gradients for Traffic Sign Recognition
Directory of Open Access Journals (Sweden)
Sheila Esmeralda Gonzalez-Reyna
2013-01-01
Full Text Available Traffic sign detection and recognition systems include a variety of applications like autonomous driving, road sign inventory, and driver support systems. Machine learning algorithms provide useful tools for traffic sign identification tasks. However, classification algorithms depend on the preprocessing stage to obtain high accuracy rates. This paper proposes a road sign characterization method based on oriented gradient maps and the Karhunen-Loeve transform in order to improve classification performance. Dimensionality reduction may be important for portable applications on resource constrained devices like FPGAs; therefore, our approach focuses on achieving a good classification accuracy by using a reduced amount of attributes compared to some state-of-the-art methods. The proposed method was tested using German Traffic Sign Recognition Benchmark, reaching a dimensionality reduction of 99.3% and a classification accuracy of 95.9% with a Multi-Layer Perceptron.
Transformational acoustic metamaterials based on pressure gradients
García-Meca, C; Barceló, C; Jannes, G; Sánchez-Dehesa, J; Martínez, A
2014-01-01
We apply a homogenization process to the acoustic velocity potential wave equation. The study of various examples shows that the resulting effective properties are different from those of the homogenized pressure wave equation for the same underlying acoustic parameters. A careful analysis reveals that a given set of inhomogeneous parameters represents an entirely different physical system depending on the considered equation. Our findings unveil a different way of tailoring acoustic properties through gradients of the static pressure. In contrast to standard metafluids based on isobaric composites, this alternative kind of metafluids is suitable for the implementation of transformational devices designed via the velocity potential equation. This includes acoustic systems in a moving background or arising from general space-time transformations. As an example, we design a device able to cloak the acoustic velocity potential.
A fast, preconditioned conjugate gradient Toeplitz solver
Pan, Victor; Schrieber, Robert
1989-01-01
A simple factorization is given of an arbitrary hermitian, positive definite matrix in which the factors are well-conditioned, hermitian, and positive definite. In fact, given knowledge of the extreme eigenvalues of the original matrix A, an optimal improvement can be achieved, making the condition numbers of each of the two factors equal to the square root of the condition number of A. This technique is to applied to the solution of hermitian, positive definite Toeplitz systems. Large linear systems with hermitian, positive definite Toeplitz matrices arise in some signal processing applications. A stable fast algorithm is given for solving these systems that is based on the preconditioned conjugate gradient method. The algorithm exploits Toeplitz structure to reduce the cost of an iteration to O(n log n) by applying the fast Fourier Transform to compute matrix-vector products. Matrix factorization is used as a preconditioner.
Passive Magnetic Shielding in Gradient Fields
Bidinosti, C P
2013-01-01
The effect of passive magnetic shielding on dc magnetic field gradients imposed by both external and internal sources is studied. It is found that for concentric cylindrical or spherical shells of high permeability material, higher order multipoles in the magnetic field are shielded progressively better, by a factor related to the order of the multipole. In regard to the design of internal coil systems for the generation of uniform internal fields, we show how one can take advantage of the coupling of the coils to the innermost magnetic shield to further optimize the uniformity of the field. These results demonstrate quantitatively a phenomenon that was previously well-known qualitatively: that the resultant magnetic field within a passively magnetically shielded region can be much more uniform than the applied magnetic field itself. Furthermore we provide formulae relevant to active magnetic compensation systems which attempt to stabilize the interior fields by sensing and cancelling the exterior fields clos...
Higher Order Force Gradient Symplectic Algorithms
Chin, S A; Chin, Siu A.; Kidwell, Donald W.
2000-01-01
We show that a recently discovered fourth order symplectic algorithm, which requires one evaluation of force gradient in addition to three evaluations of the force, when iterated to higher order, yielded algorithms that are far superior to similarly iterated higher order algorithms based on the standard Forest-Ruth algorithm. We gauge the accuracy of each algorithm by comparing the step-size independent error functions associated with energy conservation and the rotation of the Laplace-Runge-Lenz vector when solving a highly eccentric Kepler problem. For orders 6, 8, 10 and 12, the new algorithms are approximately a factor of $10^3$, $10^4$, $10^4$ and $10^5$ better.
Observation of temperature-gradient-induced magnetization.
Hou, Dazhi; Qiu, Zhiyong; Iguchi, R; Sato, K; Vehstedt, E K; Uchida, K; Bauer, G E W; Saitoh, E
2016-01-01
Applying magnetic fields has been the method of choice to magnetize non-magnetic materials, but they are difficult to focus. The magneto-electric effect and voltage-induced magnetization generate magnetization by applied electric fields, but only in special compounds or heterostructures. Here we demonstrate that a simple metal such as gold can be magnetized by a temperature gradient or magnetic resonance when in contact with a magnetic insulator by observing an anomalous Hall-like effect, which directly proves the breakdown of time-reversal symmetry. Such Hall measurements give experimental access to the spectral spin Hall conductance of the host metal, which is closely related to other spin caloritronics phenomena such as the spin Nernst effect and serves as a reference for theoretical calculation. PMID:27457185
Quasi-geostrophic dynamics in the presence of moisture gradients
Monteiro, Joy M
2016-01-01
The derivation of a quasi-geostrophic (QG) system from the rotating shallow water equations on a midlatitude beta-plane coupled with moisture is presented. Condensation is prescribed to occur whenever the moisture at a point exceeds a prescribed saturation value. It is seen that a slow condensation time scale is required to obtain a consistent set of equations at leading order. Further, since the advecting wind fields are geostrophic, changes in moisture (and hence, precipitation) occur only via non-divergent mechanisms. Following observations, a saturation profile with gradients in the zonal and meridional directions is prescribed. A purely meridional gradient has the effect of slowing down the dry Rossby waves, through a reduction in the "equivalent gradient" of the background potential vorticity. A large scale unstable moist mode results on the inclusion of a zonal gradient by itself, or in conjunction with a meridional moisture gradient. For gradients that are are representative of the atmosphere, the mos...
Bounded perturbation resilience of projected scaled gradient methods
Jin, W.; Censor, Y.; Jiang, M.
2015-01-01
We investigate projected scaled gradient (PSG) methods for convex minimization problems. These methods perform a descent step along a diagonally scaled gradient direction followed by a feasibility regaining step via orthogonal projection onto the constraint set. This constitutes a generalized algorithmic structure that encompasses as special cases the gradient projection method, the projected Newton method, the projected Landweber-type methods and the generalized Expectation-Maximization (EM)...
Structure and properties of sintered tool gradient materials
L.A. Dobrzański; B. Dołżańska
2010-01-01
Purpose: The main objective of the presented is to elaborate the fabrication technology of novel sintered tool gradient materials on the basis of hard wolfram carbide phase with cobalt binding phase, and to carry out research studies on the structure and properties of the newly elaborated sintered tool gradient materials.Design/methodology/approach: The following research studies have been carried out to elaborate a new group of sintered tool gradient materials, wolfram carbide with cobalt ma...
Intermediate gradient methods for smooth convex problems with inexact oracle
Devolder, Olivier; Glineur, François; Nesterov, Yurii
2013-01-01
Between the robust but slow (primal or dual) gradient methods and the fast but sensitive to errors fast gradient methods, our goal in this paper is to develop first-order methods for smooth convex problems with intermediate speed and intermediate sensitivity to errors. We develop a general family of first-order methods, the Intermediate Gradient Method (IGM), based on two sequences of coefficients. We prove that the behavior of such kind of method is directly governed by the choice of coeffic...
Using the gradient histogram to analyze the continuous phase plate
Yang, Chunlin
2015-01-01
The geometrical optical method has been used to discuss the far-field distribution characteristics of a continuous phase plate. The gradient histogram of the plate’s surface has been calculated. It has been proved that the gradient histogram can be used to show the angular spectrum of a phase plate. The gradient histogram can simplify the analysis process of the angular spectrum and describe the focal spot morphology more intuitively.
Determinants of Population Density Gradient in Tel Aviv Metropolitan Area
Gershon Alperovich
1980-01-01
Urban population density gradients have been traditionally estimated from cross-sectional data. The estimates obtained show a flattening of the gradients through time. Few works have attempted to empirically investigate the determinants of the parameters of the function. In this paper we have specified and estimated a simple model of density gradient which uses pooled cross-sectional and time-series data. The results show that income, size of metropolitan area and a time variable explain well...
Optimization of Polymer Separation by Gradient Polymer Elution Chromatography
Liem, Gideon R; Wang, Linda Nien-Hwa
2013-01-01
High Performance Liquid Chromatography (HPLC) has been a versatile separation method for polymers for many years. Analysis of different polymers by HPLC is typically done by utilizing the differential solubility of the polymers by mixing a good solvent and an anti-solvent in various compositions. This method is called Gradient Polymer Elution Chromatography (GPEC). While GPEC has been used extensively, it commonly uses a linear gradient to separate components. Linear solvent gradients consume...
Spatio-Temporal Gradient Analysis of Differential Microphone Arrays
Kolundzija, Mihailo; Faller, Christof; Vetterli, Martin
2009-01-01
The literature on gradient and differential microphone arrays makes a distinction between the two types, and nevertheless shows how both types can be used to obtain the same directional responses. A more theoretically sound rationale for using delays in differential microphone arrays has not yet been given. This paper presents a gradient analysis of the sound field viewed as a spatio-temporal phenomenon, and gives a theoretical interpretation of the working principles of gradient ...
Non-axisymmetric wind-accretion simulations. II. Density gradients
Ruffert, M.
1999-01-01
The hydrodynamics of a variant of classical Bondi-Hoyle-Lyttleton accretion is investigated: a totally absorbing sphere moves at various Mach numbers (3 and 10) relative to a medium, which is taken to be an ideal gas having a density gradient (of 3%, 20% or 100% over one accretion radius) perpendicular to the relative motion. Similarly to the 3D models published previously, both with velocity gradients and without, the models with a density gradient presented here exhibit non-stationary flow ...
Gradient-Based Cuckoo Search for Global Optimization
Fateen, Seif-Eddeen K.; Adrián Bonilla-Petriciolet
2014-01-01
One of the major advantages of stochastic global optimization methods is the lack of the need of the gradient of the objective function. However, in some cases, this gradient is readily available and can be used to improve the numerical performance of stochastic optimization methods specially the quality and precision of global optimal solution. In this study, we proposed a gradient-based modification to the cuckoo search algorithm, which is a nature-inspired swarm-based stochastic global opt...
Pumpernickel Valley Geothermal Project Thermal Gradient Wells
Energy Technology Data Exchange (ETDEWEB)
Z. Adam Szybinski
2006-01-01
The Pumpernickel Valley geothermal project area is located near the eastern edge of the Sonoma Range and is positioned within the structurally complex Winnemucca fold and thrust belt of north-central Nevada. A series of approximately north-northeast-striking faults related to the Basin and Range tectonics are superimposed on the earlier structures within the project area, and are responsible for the final overall geometry and distribution of the pre-existing structural features on the property. Two of these faults, the Pumpernickel Valley fault and Edna Mountain fault, are range-bounding and display numerous characteristics typical of strike-slip fault systems. These characteristics, when combined with geophysical data from Shore (2005), indicate the presence of a pull-apart basin, formed within the releasing bend of the Pumpernickel Valley – Edna Mountain fault system. A substantial body of evidence exists, in the form of available geothermal, geological and geophysical information, to suggest that the property and the pull-apart basin host a structurally controlled, extensive geothermal field. The most evident manifestations of the geothermal activity in the valley are two areas with hot springs, seepages, and wet ground/vegetation anomalies near the Pumpernickel Valley fault, which indicate that the fault focuses the fluid up-flow. There has not been any geothermal production from the Pumpernickel Valley area, but it was the focus of a limited exploration effort by Magma Power Company. In 1974, the company drilled one exploration/temperature gradient borehole east of the Pumpernickel Valley fault and recorded a thermal gradient of 160oC/km. The 1982 temperature data from five unrelated mineral exploration holes to the north of the Magma well indicated geothermal gradients in a range from 66 to 249oC/km for wells west of the fault, and ~283oC/km in a well next to the fault. In 2005, Nevada Geothermal Power Company drilled four geothermal gradient wells, PVTG-1
Galactic abundance gradients from Cepheids : On the iron abundance gradient around 10-12 kpc
Lemasle, B.; Francois, P.; Piersimoni, A.; Pedicelli, S.; Bono, G.; Laney, C. D.; Primas, F.; Romaniello, M.
2008-01-01
Context: Classical Cepheids can be adopted to trace the chemical evolution of the Galactic disk since their distances can be estimated with very high accuracy. Aims: Homogeneous iron abundance measurements for 33 Galactic Cepheids located in the outer disk together with accurate distance determinations based on near-infrared photometry are adopted to constrain the Galactic iron gradient beyond 10 kpc. Methods: Iron abundances were determined using high resolution Cepheid spectra collected wit...
Gradient Coils Temperature Controller in a Gradient System for MR Tomography
Czech Academy of Sciences Publication Activity Database
Bartušek, Karel; Dokoupil, Zdeněk; Geschneidtová, E.
Žilina : University of Žilina, 2007, -. ISBN 978-80-8070-735-4. [Research in Telecommunication Technology /8./ - RTT 2007. Žilina (SK), 11.09.2007-13.09.2007] R&D Projects: GA ČR(CZ) GA102/07/0389 Institutional research plan: CEZ:AV0Z20650511 Keywords : MR tomograph * coils temperature * preemphasisi filtering * gradient system Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering
Gradients in the Number of Species at Reef-Seagrass Ecotones Explained by Gradients in Abundance
Fernando Tuya; Vanderklift, Mathew A.; Thomas Wernberg; Thomsen, Mads S.
2011-01-01
Gradients in the composition and diversity (e.g. number of species) of faunal assemblages are common at ecotones between juxtaposed habitats. Patterns in the number of species, however, can be confounded by patterns in abundance of individuals, because more species tend to be found wherever there are more individuals. We tested whether proximity to reefs influenced patterns in the composition and diversity ('species density' = number of species per area and 'species richness' = number of ...
Minimum Inductance Optimal Design for the Gradient Coil
Institute of Scientific and Technical Information of China (English)
无
2002-01-01
In MRI (Magnetic Resonance Imaging), a crucial role of gradient coils is to image organism, meanwhile the inductance of the coils determines the speed of imaging. So it is of great importance to optimize designs of the gradient coils. The target field approach is an effective method to design the gradient coils. Having applied this method and performing many numerical tests, we achieved the designs of the x-、y-、z- gradient coils , with the linearity of the fields generated by the coils in a sphere of radius 0.30 m less than 5%, in which the inductance and resistance of the coils also meet the requirements.
Formation of Self-Generated Gradients of Iodixanol
Directory of Open Access Journals (Sweden)
John Graham
2002-01-01
Full Text Available The formation of self-generated gradients of iodixanol from a solution of uniform concentration requires the use of vertical or near-vertical rotors. The density profile that is generated depends upon the sedimentation path length of the rotor, centrifugation time, RCF and temperature. Modulation of the starting concentration changes the density range of the gradient. This Protocol Article illustrates the effect of these parameters on gradient shape in a few selected rotors. Because the gradients are formed by the centrifugal field, they are highly reproducible and easy to execute.
Generalized Defect Energy in a Gradient Plasticity Framework
Bayerschen, E
2015-01-01
A gradient plasticity model is presented that includes a generalized, power-law type defect energy depending on the gradient of an equivalent plastic strain. Numerical regularization for the case of vanishing gradients is employed in the finite element discretization of the theory. Three exemplary choices of the defect energy exponent are compared in finite element simulations of elastic-plastic tricrystals under tensile loading. The influence of the power-law exponent is discussed related to the distribution of gradients and in regard to size effects. In addition, an analytical solution is presented for the single slip case and allows to interpret the numerical findings.
Collisional transport in a plasma with steep gradients
International Nuclear Information System (INIS)
The validity is given to the newly proposed two δf method for neoclassical transport calculation, which can be solve the drift kinetic equation considering effects of steep plasma gradients, large radial electric field, finite banana width, and an orbit topology near the axis. The new method is applied to the study of ion transport with steep plasma gradients. It is found that the ion thermal diffusivity decreases as the scale length of density gradient decreases, while the ion particle flux due to ion-ion self collisions increases with increasing gradient. (author)
A class of globally convergent conjugate gradient methods
Institute of Scientific and Technical Information of China (English)
DAI; Yuhong(戴彧虹); YUAN; Yaxiang(袁亚湘)
2003-01-01
Conjugate gradient methods are very important ones for solving nonlinear optimization problems,especially for large scale problems. However, unlike quasi-Newton methods, conjugate gradient methods wereusually analyzed individually. In this paper, we propose a class of conjugate gradient methods, which can beregarded as some kind of convex combination of the Fletcher-Reeves method and the method proposed byDai et al. To analyze this class of methods, we introduce some unified tools that concern a general methodwith the scalarβk having the form of φk/φk-1. Consequently, the class of conjugate gradient methods canuniformly be analyzed.
Generation of tunable and pulsatile concentration gradients via microfluidic network
Zhou, Bingpu
2014-06-04
We demonstrate a compact Polydimethylsiloxane microfluidic chip which can quickly generate ten different chemical concentrations simultaneously. The concentration magnitude of each branch can be flexibly regulated based on the flow rate ratios of the two injecting streams. The temporal/pulsatile concentration gradients are achieved by integrating on-chip pneumatic actuated valves controlled by the external signals. The temporal concentration gradients can also be tuned precisely by varying applied frequency and duty cycle of the trigger signal. It is believed that such microdevice will be potentially used for some application areas of producing stable chemical gradients as well as allowing fast, pulsatile gradient transformation in seconds.
Towards time domain finite element analysis of gravity gradient noise
International Nuclear Information System (INIS)
Gravity gradient noise generated by seismic displacements constitute a limiting factor for the sensitivity of ground based gravitational wave detectors at frequencies below 10 Hz. We present a finite element framework to calculate the soil response to various excitations. The accompanying gravity gradients as a result of the seismic displacement field can then be evaluated. The framework is first shown to accurately model seismic waves in homogenous media. Calculations of the gravity gradient noise are then shown to be in agreement with previous analytical results. Finally results of gravity gradient noise from a single pulse excitation of a homogenous medium are discussed.
Einstein telescope site selection: Seismic and gravity gradient noise
Energy Technology Data Exchange (ETDEWEB)
Brand, J F J van den; Beker, M G; Doets, M; Hennes, E; Rabeling, D S, E-mail: jo@nikhef.n [Nikhef, National Institute for Subatomic Physics, Science Park 105, 1098 XG Amsterdam (Netherlands)
2010-01-01
Gravity gradient noise generated by seismic displacements may be the limiting factor for the sensitivity of third-generation gravitational wave detectors at frequencies below 10 Hz. A finite element framework has been developed to calculate the soil response to various excitations. The accompanying gravity gradients as a result of the seismic displacement field can then be evaluated. The results of the gravity gradient noise are in good agreement with previous analytical results. Finally results of gravity gradient noise from a single pulse excitation of a homogenous medium are discussed for an underground detector.
Einstein telescope site selection: Seismic and gravity gradient noise
International Nuclear Information System (INIS)
Gravity gradient noise generated by seismic displacements may be the limiting factor for the sensitivity of third-generation gravitational wave detectors at frequencies below 10 Hz. A finite element framework has been developed to calculate the soil response to various excitations. The accompanying gravity gradients as a result of the seismic displacement field can then be evaluated. The results of the gravity gradient noise are in good agreement with previous analytical results. Finally results of gravity gradient noise from a single pulse excitation of a homogenous medium are discussed for an underground detector.
Towards time domain finite element analysis of gravity gradient noise
Energy Technology Data Exchange (ETDEWEB)
Beker, M G; Brand, J F J van den; Hennes, E; Rabeling, D S, E-mail: mbeker@nikhef.n [Nikhef, National Institute for Subatomic Physics, Science Park 105, 1098 XG Amsterdam (Netherlands)
2010-05-01
Gravity gradient noise generated by seismic displacements constitute a limiting factor for the sensitivity of ground based gravitational wave detectors at frequencies below 10 Hz. We present a finite element framework to calculate the soil response to various excitations. The accompanying gravity gradients as a result of the seismic displacement field can then be evaluated. The framework is first shown to accurately model seismic waves in homogenous media. Calculations of the gravity gradient noise are then shown to be in agreement with previous analytical results. Finally results of gravity gradient noise from a single pulse excitation of a homogenous medium are discussed.
Role of spatial averaging in multicellular gradient sensing
Smith, Tyler; Fancher, Sean; Levchenko, Andre; Nemenman, Ilya; Mugler, Andrew
2016-06-01
Gradient sensing underlies important biological processes including morphogenesis, polarization, and cell migration. The precision of gradient sensing increases with the length of a detector (a cell or group of cells) in the gradient direction, since a longer detector spans a larger range of concentration values. Intuition from studies of concentration sensing suggests that precision should also increase with detector length in the direction transverse to the gradient, since then spatial averaging should reduce the noise. However, here we show that, unlike for concentration sensing, the precision of gradient sensing decreases with transverse length for the simplest gradient sensing model, local excitation–global inhibition. The reason is that gradient sensing ultimately relies on a subtraction of measured concentration values. While spatial averaging indeed reduces the noise in these measurements, which increases precision, it also reduces the covariance between the measurements, which results in the net decrease in precision. We demonstrate how a recently introduced gradient sensing mechanism, regional excitation–global inhibition (REGI), overcomes this effect and recovers the benefit of transverse averaging. Using a REGI-based model, we compute the optimal two- and three-dimensional detector shapes, and argue that they are consistent with the shapes of naturally occurring gradient-sensing cell populations.
A multiscale gradient-dependent plasticity model for size effects
Lyu, Hao; Taheri-Nassaj, Nasrin; Zbib, Hussein M.
2016-06-01
The mechanical behaviour of polycrystalline material is closely correlated to grain size. In this study, we investigate the size-dependent phenomenon in multi-phase steels using a continuum dislocation dynamic model coupled with viscoplastic self-consistent model. We developed a dislocation-based strain gradient plasticity model and a stress gradient plasticity model, as well as a combined model, resulting in a theory that can predict size effect over a wide range of length scales. Results show that strain gradient plasticity and stress gradient plasticity are complementary rather than competing theories. The stress gradient model is dominant at the initial strain stage, and is much more effective for predicting yield strength than the strain gradient model. For larger deformations, the strain gradient model is dominant and more effective for predicting size-dependent hardening. The numerical results are compared with experimental data and it is found that they have the same trend for the yield stress. Furthermore, the effect of dislocation density at different strain stages is investigated, and the findings show that the Hall-Petch relation holds for the initial strain stage and breaks down for higher strain levels. Finally, a power law to describe the size effect and the transition zone between the strain gradient and stress gradient dominated regions is developed.
Exponential decay for sc-gradient flow lines
Albers, Peter; Frauenfelder, Urs
2013-01-01
In this paper we introduce the notion of sc-action functionals and their sc-gradient flow lines. Our approach is inspired by Floer's unregularized gradient flow. The main result of this paper is that under a Morse condition sc-gradient flow lines have uniform exponential decay towards critical points. The ultimate goal for the future is to construct a M-polyfold bundle over a M-polyfold such that the space of broken sc-gradient flow lines is the zero set of a appropriate sc-section. Here unif...
Gradient induced liquid motion on laser structured black Si surfaces
Paradisanos, I; Anastasiadis, S H; Stratakis, E
2015-01-01
This letter reports on the femtosecond laser fabrication of gradient-wettability micro/nano- patterns on Si surfaces. The dynamics of directional droplet spreading on the surface tension gradients developed is systematically investigated and discussed. It is shown that microdroplets on the patterned surfaces spread at a maximum speed of 505 mm/sec, that is the highest velocity demonstrated so far for liquid spreading on a surface tension gradient in ambient conditions. The application of the proposed laser patterning technique for the precise fabrication of surface tension gradients for open microfluidic systems, liquid management in fuel cells and drug delivery is envisaged.
The electric field gradient in fluorides
International Nuclear Information System (INIS)
The electric quadrupole hyperfine interaction was investigated for various fluorides by the time-differential observation of the perturbed γ angular correlation and the Kern-Hanle effect of the 197 keV radiation of the 5/2+ level in 19F. This level was excited by inelastic proton scattering. The dependence of the quadrupole coupling constant from the chemical bond of the atom to its ligands was measured in fluorides of two-valid transition elements and in pureley covalent molecules, as (CF2)sub(n) or SF6. The influence of radiation-induced defects in nonmetals was investigated for cubic fluorides between 80 K and 1050 K. For CaF2 two different field gradients are obtained with coupling constants between 27 MHz and 3 MHz. By measurements of the angular distribution for CaF2/PrF3 mixed crystals which contain a variable concentration of F- interstitials was shown that the appearance of the 3 MHz frequency is correlated with the concentration of F- interstitials in CaF2. (BHO)
Evaluation of the Field Gradient Lattice Detector
AUTHOR|(CDS)2072983
A novel Micro Pattern Gas Detector, named the Field Gradient Lattice Detector, has been implemented using technologies available to CERN’s Printed Circuit Workshop. Numerous prototypes based on various materials were constructed in different geometries and their gain performance has been studied using 55Fe and 109Cd X-ray sources in Argon-CO2 gas mixtures. Two axis (2D) prototype structures have been shown to provide stable gains of around 1000 while a 3D design, based on the same polyimide foils used in other MPGD elements, holds a gain of 5000 for 8.9 keV X-rays even at high rates of 22 kHz/mm2. At a gain of 3100, the device has been tested up to 1 MHz/mm2 and shows no signs of degradation in performance. The energy resolution of the 3D-in-polyimide is modest, around 40% for 5.9 keV X-rays and 30% if the source is collimated indicating a variation in gain over the 3x3 cm2 active area. Having the most promise for future applications, the 3D-in-polyimide design has been selected for testing with a custom-bu...
Gradient Flow Analysis on MILC HISQ Ensembles
Bazavov, A; Brown, N; DeTar, C; Foley, J; Gottlieb, Steven; Heller, U M; Hetrick, J E; Komijani, J; Laiho, J; Levkova, L; Oktay, M; Sugar, R L; Toussaint, D; Van de Water, R S; Zhou, R
2014-01-01
We report on a preliminary scale determination with gradient-flow techniques on the $N_f = 2 + 1 + 1$ HISQ ensembles generated by the MILC collaboration. The ensembles include four lattice spacings, ranging from 0.15 to 0.06 fm, and both physical and unphysical values of the quark masses. The scales $\\sqrt{t_0}/a$ and $w_0/a$ are computed using Symanzik flow and the cloverleaf definition of $\\langle E \\rangle$ on each ensemble. Then both scales and the meson masses $aM_\\pi$ and $aM_K$ are adjusted for mistunings in the charm mass. Using a combination of continuum chiral perturbation theory and a Taylor series ansatz in the lattice spacing, the results are simultaneously extrapolated to the continuum and interpolated to physical quark masses. Our preliminary results are $\\sqrt{t_0} = 0.1422(7)$fm and $w_0 = 0.1732(10)$fm. We also find the continuum mass-dependence of $w_0$.
Electron transfer across a thermal gradient.
Craven, Galen T; Nitzan, Abraham
2016-08-23
Charge transfer is a fundamental process that underlies a multitude of phenomena in chemistry and biology. Recent advances in observing and manipulating charge and heat transport at the nanoscale, and recently developed techniques for monitoring temperature at high temporal and spatial resolution, imply the need for considering electron transfer across thermal gradients. Here, a theory is developed for the rate of electron transfer and the associated heat transport between donor-acceptor pairs located at sites of different temperatures. To this end, through application of a generalized multidimensional transition state theory, the traditional Arrhenius picture of activation energy as a single point on a free energy surface is replaced with a bithermal property that is derived from statistical weighting over all configurations where the reactant and product states are equienergetic. The flow of energy associated with the electron transfer process is also examined, leading to relations between the rate of heat exchange among the donor and acceptor sites as functions of the temperature difference and the electronic driving bias. In particular, we find that an open electron transfer channel contributes to enhanced heat transport between sites even when they are in electronic equilibrium. The presented results provide a unified theory for charge transport and the associated heat conduction between sites at different temperatures. PMID:27450086
On gradient solitons of the Ricci-Harmonic flow
Guo, Hongxin; Philipowski, Robert; Thalmaier, Anton
2015-01-01
In this paper we study gradient solitons to the Ricci flow coupled with harmonic map heat flow. We derive new identities on solitons similar to those on gradient solitons of the Ricci flow. When the soliton is compact, we get a classification result. We also discuss the relation with quasi-Einstein manifolds.
Asymptotic estimates and compactness of expanding gradient Ricci solitons
Deruelle, Alix
2014-01-01
We first investigate the asymptotics of conical expanding gradient Ricci solitons by proving sharp decay rates to the asymptotic cone both in the generic and the asymptotically Ricci flat case. We then establish a compactness theorem concerning nonnegatively curved expanding gradient Ricci solitons.
Color and stellar population gradients in galaxies. Correlation with mass
Tortora, C; Cardone, V F; Capaccioli, M; Jetzer, Ph; Molinaro, R
2010-01-01
We analyze the color gradients (CGs) of ~50000 nearby SDSS galaxies. From synthetic spectral models based on a simplified star formation recipe, we derive the mean spectral properties, and explain the observed radial trends of the color as gradients of the stellar population age and metallicity (Z). The most massive ETGs (M_* > 10^{11} Msun) have shallow CGs in correspondence of shallow (negative) Z gradients. In the stellar mass range 10^(10.3-10.5) < M_* < 10^(11) Msun, the Z gradients reach their minimum of ~ -0.5 dex^{-1}. At M_* ~ 10^{10.3-10.5} Msun, color and Z gradient slopes suddenly change. They turn out to anti-correlate with the mass, becoming highly positive at the very low masses. We have also found that age gradients anti-correlate with Z gradients, as predicted by hierarchical cosmological simulations for ETGs. On the other side, LTGs have gradients which systematically decrease with mass (and are always more negative than in ETGs), consistently with the expectation from gas infall and S...
Stellar population gradients in early-type cluster galaxies
Rawle, T D; Lucey, J R
2009-01-01
We present a study of internal stellar population gradients in early-type cluster galaxies. Using the VLT VIMOS integral field unit, we observed 19 galaxies in the core of the Shapley Supercluster (z = 0.048). The radial trends in nine absorption lines (HdF to Fe5406) were measured to the effective radius for 14 galaxies, from which we derived the gradients in age, total metallicity and alpha-element over-abundance. We combine these with results from 11 galaxies studied in our previous VIMOS work (Rawle et al 2008). We observe a mean metallicity gradient of -0.13 +/- 0.04 per dex and, in common with the findings of previous studies, galaxies with log(sigma) > 2.1 have a sizeable intrinsic scatter in metallicity gradient. The mean log(age/Gyr) gradient is -0.02 +/- 0.06 per dex, although several galaxies have significant positive or negative age gradients. The mean gradient in alpha-element enhancement is -0.10 +/- 0.04 per dex. We find that stellar population gradients are primarily related to the central met...
Non-invasive measurement of pressure gradients using ultrasound
DEFF Research Database (Denmark)
Olesen, Jacob Bjerring; Traberg, Marie Sand; Pihl, Michael Johannes; Jensen, Jørgen Arendt
2013-01-01
A non-invasive method for estimating 2-D pressure gradients from ultrasound vector velocity data is presented. The method relies on in-plane vector velocity fields acquired using the Transverse Oscillation method. The pressure gradients are estimated by applying the Navier-Stokes equations for...
A NONMONOTONE CONJUGATE GRADIENT ALGORITHM FOR UNCONSTRAINED OPTIMIZATION
Institute of Scientific and Technical Information of China (English)
DAI Yuhong
2002-01-01
Conjugate gradient methods are very important methods for unconstrained optimization, especially for large scale problems. In this paper, we propose a new conjugate gradient method, in which the technique of nonmonotone line search is used. Under mild assumptions, we prove the global convergence of the method. Some numerical results are also presented.
Accurate Measurement of Magnetic Resonance Imaging Gradient Characteristics
Directory of Open Access Journals (Sweden)
Hui Liu
2013-12-01
Full Text Available Recently, gradient performance and fidelity has become of increasing interest, as the fidelity of the magnetic resonance (MR image is somewhat dependent on the fidelity of the gradient system. In particular, for high fidelity non-Cartesian imaging, due to non-fidelity of the gradient system, it becomes necessary to know the actual k-space trajectory as opposed to the requested trajectory. In this work we show that, by considering the gradient system as a linear time-invariant system, the gradient impulse response function (GIRF can be reliably measured to a relatively high degree of accuracy with a simple setup, using a small phantom and a series of simple experiments. It is shown experimentally that the resulting GIRF is able to predict actual gradient performance with a high degree of accuracy. The method captures not only the frequency response but also gradient timing errors and artifacts due to mechanical vibrations of the gradient system. Some discussion is provided comparing the method presented here with other analogous methods, along with limitations of these methods.
A Gradient Regularization Method in Crosswell Seismic Tomography
Institute of Scientific and Technical Information of China (English)
Wang Shoudong
2006-01-01
Crosswell seismic tomography can be used to study the lateral variation of reservoirs, reservoir properties and the dynamic movement of fluids. In view of the instability of crosswell seismic tomography, the gradient method was improved by introducing regularization, and a gradient regularization method in presented in this paper. This method was verified by processing numerical simulation data and physical model data.
Scattering-angle based filtering of the waveform inversion gradients
Alkhalifah, Tariq Ali
2014-11-22
Full waveform inversion (FWI) requires a hierarchical approach to maneuver the complex non-linearity associated with the problem of velocity update. In anisotropic media, the non-linearity becomes far more complex with the potential trade-off between the multiparameter description of the model. A gradient filter helps us in accessing the parts of the gradient that are suitable to combat the potential non-linearity and parameter trade-off. The filter is based on representing the gradient in the time-lag normalized domain, in which the low scattering angle of the gradient update is initially muted out in the FWI implementation, in what we may refer to as a scattering angle continuation process. The result is a low wavelength update dominated by the transmission part of the update gradient. In this case, even 10 Hz data can produce vertically near-zero wavenumber updates suitable for a background correction of the model. Relaxing the filtering at a later stage in the FWI implementation allows for smaller scattering angles to contribute higher-resolution information to the model. The benefits of the extended domain based filtering of the gradient is not only it\\'s ability in providing low wavenumber gradients guided by the scattering angle, but also in its potential to provide gradients free of unphysical energy that may correspond to unrealistic scattering angles.
Microstructural gradients in thin hard coatings -- tailor-made
DEFF Research Database (Denmark)
Pantleon, Karen; Oettel, Heinrich
1998-01-01
) alternating sputtering with and without substrate voltage and (c) pulsed bias voltage. On the basis of X-ray diffraction measurements, it is demonstrated that residual stress gradients and texture gradients can be designed tailor-made. Furthermore, results of microhardness measurements and scratch tests...
Influence of pouring temperature on a thermal gradient
Directory of Open Access Journals (Sweden)
J. Suchoń
2010-01-01
Full Text Available In the thesis there are presented results of computer simulation of casting solidification process, characteristics of solidification rate in several points as well as course of gradient change between these points. Based on the obtained results, an influence of initial conditions on temperature gradient during the solidification process was determined.
Substrate-Bound Protein Gradients to Study Haptotaxis
Directory of Open Access Journals (Sweden)
Sebastien G. Ricoult
2015-03-01
Full Text Available Cells navigate in response to inhomogeneous distributions of extracellular guidance cues. The cellular and molecular mechanisms underlying migration in response to gradients of chemical cues have been investigated for over a century. Following the introduction of micropipettes and more recently microfluidics for gradient generation, much attention and effort was devoted to study cellular chemotaxis, which is defined as guidance by gradients of chemical cues in solution. Haptotaxis, directional migration in response to gradients of substrate-bound cues, has received comparatively less attention; however it is increasingly clear that in vivo many physiologically relevant guidance proteins – including many secreted cues – are bound to cellular surfaces or incorporated into extracellular matrix and likely function via a haptotactic mechanism. Here, we review the history of haptotaxis. We examine the importance of the reference surface, the surface in contact with the cell that is not covered by the cue, which forms a gradient opposing the gradient of the protein cue and must be considered in experimental designs and interpretation of results. We review and compare microfluidics, contact-printing, light patterning and 3D fabrication to pattern substrate-bound protein gradients in vitro, and focus on their application to study axon guidance. The range of methods to create substrate-bound gradients discussed herein make possible systematic analyses of haptotactic mechanisms. Furthermore, understanding the fundamental mechanisms underlying cell motility will inform bioengineering approaches to program cell navigation and recover lost function.
Wing coloration and pigment gradients in scales of pierid butterflies
Giraldo, Marco A.; Stavenga, Doekele G.
2008-01-01
Depending on the species, the individual scales of butterfly wings have a longitudinal gradient in structure and reflectance properties, as shown by scanning electron microscopy and microspectrophotometry. White scales of the male Small White, Pieris rapae crucivora, show a strong gradient in both t
Profiling Signaling Polarity in Chemotactic Cells
Energy Technology Data Exchange (ETDEWEB)
Wang, Yingchun; Ding, Shi-Jian; Wang, Wei; Jacobs, Jon M.; Qian, Weijun; Moore, Ronald J.; Yang, Feng; Camp, David G.; Smith, Richard D.; Klemke, Richard L.
2007-05-15
While directional movement requires morphological polarization characterized by formation of a leading pseudopodium at the front and a trailing rear at the back, little is known about how protein networks are spatially integrated to regulate this process. Here, we utilize a unique pseudopodial purification system and quantitative proteomics and phosphoproteomics to map the spatial relationship of 3509 proteins and 228 distinct sites of phosphorylation in polarized cells. Networks of signaling proteins, metabolic pathways, actin regulatory proteins, and kinase-substrate cascades were found to partition to different poles of the cell including components of the Ras/ERK pathway. Also, several novel proteins were found to be differentially phosphorylated at the front or rear of polarized cells and to localize to distinct subcellular structures. Our findings provide insight into the spatial organization of signaling networks that control cell movement and provide a comprehensive profile of proteins and their sites of phosphorylation that control cell polarization.
Suppression of Chemotactic Explosion by Mixing
Kiselev, Alexander; Xu, Xiaoqian
2016-06-01
Chemotaxis plays a crucial role in a variety of processes in biology and ecology. In many instances, processes involving chemical attraction take place in fluids. One of the most studied PDE models of chemotaxis is given by the Keller-Segel equation, which describes a population density of bacteria or mold which is attracted chemically to substance they secrete. Solutions of the Keller-Segel equation can exhibit dramatic collapsing behavior, where density concentrates positive mass in a measure zero region. A natural question is whether the presence of fluid flow can affect singularity formation by mixing the bacteria thus making concentration harder to achieve. In this paper, we consider the parabolic-elliptic Keller-Segel equation in two and three dimensions with an additional advection term modeling ambient fluid flow. We prove that for any initial data, there exist incompressible fluid flows such that the solution to the equation stays globally regular. On the other hand, it is well known that when the fluid flow is absent, there exists initial data leading to finite time blow up. Thus the presence of fluid flow can prevent the singularity formation. We discuss two classes of flows that have the explosion arresting property. Both classes are known as very efficient mixers. The first class are the relaxation enhancing (RE) flows of (Ann Math:643-674, 2008). These flows are stationary. The second class of flows are the Yao-Zlatos near-optimal mixing flows (Mixing and un-mixing by incompressible flows. arXiv:1407.4163, 2014), which are time dependent. The proof is based on the nonlinear version of the relaxation enhancement construction of (Ann Math:643-674, 2008), and on some variations of the global regularity estimate for the Keller-Segel model.
Gradient dynamics models for liquid films with soluble surfactant
Thiele, Uwe; Pismen, Len M
2016-01-01
In this paper we propose equations of motion for the dynamics of liquid films of surfactant suspensions that consist of a general gradient dynamics framework based on an underlying energy functional. This extends the gradient dynamics approach to dissipative non-equilibrium thin film systems with several variables, and casts their dynamic equations into a form that reproduces Onsager's reciprocity relations. We first discuss the general form of gradient dynamics models for an arbitrary number of fields and discuss simple well-known examples with one or two fields. Next, we develop the gradient dynamics (three field) model for a thin liquid film covered by soluble surfactant and discuss how it automatically results in consistent convective (driven by pressure gradients, Marangoni forces and Korteweg stresses), diffusive, adsorption/desorption, and evaporation fluxes. We then show that in the dilute limit, the model reduces to the well-known hydrodynamic form that includes Marangoni fluxes due to a linear equat...
Effects of fluid velocity gradients on heavy quark energy loss
International Nuclear Information System (INIS)
We use holographic duality to analyze the drag force on, and consequent energy loss of, a heavy quark moving through a strongly coupled conformal fluid with non-vanishing gradients in its velocity and temperature. We derive the general expression for the drag force to first order in the fluid gradients. Using this general expression, we show that a quark that is instantaneously at rest, relative to the fluid, in a fluid whose velocity is changing with time feels a nonzero force. And, we show that for a quark that is moving ultra-relativistically, the first order gradient “corrections” become larger than the zeroth order drag force, suggesting that the gradient expansion may be unreliable in this regime. We illustrate the importance of the fluid gradients for heavy quark energy loss by considering a fluid with one-dimensional boost invariant Bjorken expansion as well as the strongly coupled plasma created by colliding sheets of energy
HG2006 Workshop on High-Gradient Radio Frequency
2006-01-01
Meeting to be held at CERN on 25-27 September 2006 in Room 40/S2-B01 (Building 40). The objective of the workshop is to bring the high-gradient RF community together to present and discuss recent theoretical and experimental developments. Significant progress has recently been made in understanding the basic physics of rf breakdown and developing techniques for achieving higher gradients. This workshop should contribute to maintaining these efforts and to promoting contacts and collaboration. The scientific programme will be organized in half day sessions dedicated to: High-gradient rf experimental results Theory and computation High-gradient technology, materials and processing Specialized experiments on related high-gradient or high-power phenomenon like dc discharge and pulsed surface heating Reports from collaborations and projects. Each session will consist of selected presentations followed by a dedicated discussion. Information about the meeting and participant registration is available at http...
Generalized Hooke's law for isotropic second gradient materials
dell'Isola, F; Vidoli, S
2010-01-01
In the spirit of Germain the most general objective stored elastic energy for a second gradient material is deduced using a literature result of Fortun\\'e & Vall\\'ee. Linear isotropic constitutive relations for stress and hyperstress in terms of strain and strain-gradient are then obtained proving that these materials are characterized by seven elastic moduli and generalizing previous studies by Toupin, Mindlin and Sokolowski. Using a suitable decomposition of the strain-gradient, it is found a necessary and sufficient condition, to be verified by the elastic moduli, assuring positive definiteness of the stored elastic energy. The problem of warping in linear torsion of a prismatic second gradient cylinder is formulated, thus obtaining a possible measurement procedure for one of the second gradient elastic moduli.
Gradient-Based Cuckoo Search for Global Optimization
Directory of Open Access Journals (Sweden)
Seif-Eddeen K. Fateen
2014-01-01
Full Text Available One of the major advantages of stochastic global optimization methods is the lack of the need of the gradient of the objective function. However, in some cases, this gradient is readily available and can be used to improve the numerical performance of stochastic optimization methods specially the quality and precision of global optimal solution. In this study, we proposed a gradient-based modification to the cuckoo search algorithm, which is a nature-inspired swarm-based stochastic global optimization method. We introduced the gradient-based cuckoo search (GBCS and evaluated its performance vis-à-vis the original algorithm in solving twenty-four benchmark functions. The use of GBCS improved reliability and effectiveness of the algorithm in all but four of the tested benchmark problems. GBCS proved to be a strong candidate for solving difficult optimization problems, for which the gradient of the objective function is readily available.
Efficient and robust gradient enhanced Kriging emulators.
Energy Technology Data Exchange (ETDEWEB)
Dalbey, Keith R.
2013-08-01
%E2%80%9CNaive%E2%80%9D or straight-forward Kriging implementations can often perform poorly in practice. The relevant features of the robustly accurate and efficient Kriging and Gradient Enhanced Kriging (GEK) implementations in the DAKOTA software package are detailed herein. The principal contribution is a novel, effective, and efficient approach to handle ill-conditioning of GEK's %E2%80%9Ccorrelation%E2%80%9D matrix, RN%CC%83, based on a pivoted Cholesky factorization of Kriging's (not GEK's) correlation matrix, R, which is a small sub-matrix within GEK's RN%CC%83 matrix. The approach discards sample points/equations that contribute the least %E2%80%9Cnew%E2%80%9D information to RN%CC%83. Since these points contain the least new information, they are the ones which when discarded are both the easiest to predict and provide maximum improvement of RN%CC%83's conditioning. Prior to this work, handling ill-conditioned correlation matrices was a major, perhaps the principal, unsolved challenge necessary for robust and efficient GEK emulators. Numerical results demonstrate that GEK predictions can be significantly more accurate when GEK is allowed to discard points by the presented method. Numerical results also indicate that GEK can be used to break the curse of dimensionality by exploiting inexpensive derivatives (such as those provided by automatic differentiation or adjoint techniques), smoothness in the response being modeled, and adaptive sampling. Development of a suitable adaptive sampling algorithm was beyond the scope of this work; instead adaptive sampling was approximated by omitting the cost of samples discarded by the presented pivoted Cholesky approach.
Cardiovascular Responses of Snakes to Gravitational Gradients
Hsieh, Shi-Tong T.; Lillywhite, H. B.; Ballard, R. E.; Hargens, A. R.; Holton, Emily M. (Technical Monitor)
1998-01-01
Snakes are useful vertebrates for studies of gravitational adaptation, owing to their elongate body and behavioral diversification. Scansorial species have evolved specializations for regulating hemodynamics during exposure to gravitational stress, whereas, such adaptations are less well developed in aquatic and non-climbing species. We examined responses of the amphibious snake,\\italicize (Nerodia rhombifera), to increments of Gz (head-to-tail) acceleration force on both a short- and long-arm centrifuge (1.5 vs. 3.7 m radius, from the hub to tail end of snake). We recorded heart rate, dorsal aortic pressure, and carotid arterial blood flow during stepwise 0.25 G increments of Gz force (referenced at the tail) in conscious animals. The Benz tolerance of a snake was determined as the Gz level at which carotid blood flow ceased and was found to be significantly greater at the short- than long-arm centrifuge radius (1.57 Gz vs. 2.0 Gz, respectively; P=0.016). A similar pattern of response was demonstrated in semi-arboreal rat snakes,\\italicize{Elaphe obsoleta}, which are generally more tolerant of Gz force (2.6 Gz at 1.5m radius) than are water snakes. The tolerance differences of the two species reflected cardiovascular responses, which differed quantitatively but not qualitatively: heart rates increased while arterial pressure and blood flow decreased in response to increasing levels of Gz. Thus, in both species of snakes, a reduced gradient of Gz force (associated with greater centrifuge radius) significantly decreases the Gz level that can be tolerated.
Biogeochemical gradients above a coal tar DNAPL.
Scherr, Kerstin E; Backes, Diana; Scarlett, Alan G; Lantschbauer, Wolfgang; Nahold, Manfred
2016-09-01
Naturally occurring distribution and attenuation processes can keep hydrocarbon emissions from dense non aqueous phase liquids (DNAPL) into the adjacent groundwater at a minimum. In a historically coal tar DNAPL-impacted site, the de facto absence of a plume sparked investigations regarding the character of natural attenuation and DNAPL resolubilization processes at the site. Steep vertical gradients of polycyclic aromatic hydrocarbons, microbial community composition, secondary water quality and redox-parameters were found to occur between the DNAPL-proximal and shallow waters. While methanogenic and mixed-electron acceptor conditions prevailed close to the DNAPL, aerobic conditions and very low dissolved contaminant concentrations were identified in three meters vertical distance from the phase. Comprehensive two-dimensional gas chromatography-mass spectrometry (GC×GC-MS) proved to be an efficient tool to characterize the behavior of the present complex contaminant mixture. Medium to low bioavailability of ferric iron and manganese oxides of aquifer samples was detected via incubation with Shewanella alga and evidence for iron and manganese reduction was collected. In contrast, 16S rDNA phylogenetic analysis revealed the absence of common iron reducing bacteria. Aerobic hydrocarbon degraders were abundant in shallow horizons, while nitrate reducers were dominating in deeper aquifer regions, in addition to a low relative abundance of methanogenic archaea. Partial Least Squares - Canonical Correspondence Analysis (PLS-CCA) suggested that nitrate and oxygen concentrations had the greatest impact on aquifer community structure in on- and offsite wells, which had a similarly high biodiversity (H' and Chao1). Overall, slow hydrocarbon dissolution from the DNAPL appears to dominate natural attenuation processes. This site may serve as a model for developing legal and technical strategies for the treatment of DNAPL-impacted sites where contaminant plumes are absent or
Investigation of axial power gradients near a control rod tip
International Nuclear Information System (INIS)
Highlights: → Pin power gradients near BWR control rod tips have been investigated. → A control rod tip is modeled in MCNP and compared to simplified 2D/3D geometry. → Small nodes increases pin power gradients; standard nodes underestimates gradients. → The MCNP results are validated against axial gamma scan of a controlled fuel pin. - Abstract: Control rod withdrawal in BWRs induces large power steps in the adjacent fuel assemblies. This paper investigates how well a 2D/3D method, e.g., CASMO5/SIMULATE5 computes axial pin power gradients adjacent to an asymmetrical control-rod tip in a BWR. The ability to predict pin power gradients accurately is important for safety considerations whereas large powers steps induced by control rod withdrawal can cause Pellet Cladding Interaction. The computation of axial pin power gradients axially around a control rod tip is a challenging task for any nodal code. On top of that, asymmetrical control rod handles are present in some BWR designs. The lattice code CASMO requires diagonal symmetry of all control rod parts. This introduces an error in computed pin power gradients that has been evaluated by Monte Carlo calculations. The results show that CASMO5/SIMULATE5, despite the asymmetrical control rod handle, is able to predict the axial pin power gradient within 1%/cm for axial nodal sizes of 15-3.68 cm. However, a nodal size of 3.68 cm still causes underestimations of pin power gradients compared with 1 cm nodes. Furthermore, if conventional node sizes are used, ∼15 cm, pin power gradients can be underestimated by over 50% compared with 1 cm nodes. The detailed axial pin power profiles from MCNP are corroborated by measured gamma scan data on fuel rods irradiated adjacent to control rods.
Direct and Indirect Gradient Control for Static Optimisation
Institute of Scientific and Technical Information of China (English)
Yi Cao
2005-01-01
Static "self-optimising" control is an important concept, which provides a link between static optimisation and control[1]. According to the concept, a dynamic control system could be configured in such a way that when a set of certain variables are maintained at their setpoints, the overall process operation is automatically optimal or near optimal at steadystate in the presence of disturbances. A novel approach using constrained gradient control to achieve "self-optimisation" has been proposed by Cao[2]. However, for most process plants, the information required to get the gradient measure may not be available in real-time. In such cases, controlled variable selection has to be carried out based on measurable candidates. In this work, the idea of direct gradient control has been extended to controlled variable selection based on gradient sensitivity analysis (indirect gradient control). New criteria, which indicate the sensitivity of the gradient function to disturbances and implementation errors, have been derived for selection. The particular case study shows that the controlled variables selected by gradient sensitivity measures are able to achieve near optimal performance.
Single image superresolution based on gradient profile sharpness.
Yan, Qing; Xu, Yi; Yang, Xiaokang; Nguyen, Truong Q
2015-10-01
Single image superresolution is a classic and active image processing problem, which aims to generate a high-resolution (HR) image from a low-resolution input image. Due to the severely under-determined nature of this problem, an effective image prior is necessary to make the problem solvable, and to improve the quality of generated images. In this paper, a novel image superresolution algorithm is proposed based on gradient profile sharpness (GPS). GPS is an edge sharpness metric, which is extracted from two gradient description models, i.e., a triangle model and a Gaussian mixture model for the description of different kinds of gradient profiles. Then, the transformation relationship of GPSs in different image resolutions is studied statistically, and the parameter of the relationship is estimated automatically. Based on the estimated GPS transformation relationship, two gradient profile transformation models are proposed for two profile description models, which can keep profile shape and profile gradient magnitude sum consistent during profile transformation. Finally, the target gradient field of HR image is generated from the transformed gradient profiles, which is added as the image prior in HR image reconstruction model. Extensive experiments are conducted to evaluate the proposed algorithm in subjective visual effect, objective quality, and computation time. The experimental results demonstrate that the proposed approach can generate superior HR images with better visual quality, lower reconstruction error, and acceptable computation efficiency as compared with state-of-the-art works. PMID:25807567
Development and characterization of 430L matrix composites gradient materials
Directory of Open Access Journals (Sweden)
Elisa Maria Ruiz-Navas
2005-03-01
Full Text Available This paper deals with a new concept that is Functionally Gradient Materials (FGM. The materials developed in this work are constituted by a 430L matrix core and composite materials with this matrix and gradient concentration with NbC reinforcement, from the core to the surface, through different steps. Composite powders of different content in NbC were produced through high energy milling in order to obtain the gradient composition. The morphology and microhardness of these powders were characterised and subsequently were processed through conventional P/M techniques, pressing and sintering. The materials obtained show improved wear behaviour.
High gradient accelaration of particles by wake field transformation
International Nuclear Information System (INIS)
High gradient linear accelerators seem to be the most likely type of future e+e- colliding beam machine with center of mass energy in the TeV range. In order to make such an accelerator economically feasible accelerating gradients must be above 100 MeV per meter. The concept of ''Wake Field Transformation'' seems to allow such high gradients. The basic principle is explained together with theoretical results from electromagnetic field calculations and particle dynamics simulation codes. The layout of an experiment is described which is presently under construction at DESY. (author)
Hydrodynamics Beyond the Gradient Expansion: Resurgence and Resummation.
Heller, Michal P; Spaliński, Michał
2015-08-14
Consistent formulations of relativistic viscous hydrodynamics involve short-lived modes, leading to asymptotic rather than convergent gradient expansions. In this Letter we consider the Müller-Israel-Stewart theory applied to a longitudinally expanding quark-gluon plasma system and identify hydrodynamics as a universal attractor without invoking the gradient expansion. We give strong evidence for the existence of this attractor and then show that it can be recovered from the divergent gradient expansion by Borel summation. This requires careful accounting for the short-lived modes which leads to an intricate mathematical structure known from the theory of resurgence. PMID:26317715
Rainbow refractometry on particles with radial refractive index gradients
Energy Technology Data Exchange (ETDEWEB)
Saengkaew, Sawitree [CNRS/Universite et INSA de Rouen, UMR 6614/CORIA, BP12, 76 800, Saint Etienne du Rouvray CEDEX (France); Chulalongkorn University, Center of Excellence in Particle Technology, Faculty of Engineering, Bangkok (Thailand); Charinpanitkul, Tawatchai; Vanisri, Hathaichanok; Tanthapanichakoon, Wiwut [Chulalongkorn University, Center of Excellence in Particle Technology, Faculty of Engineering, Bangkok (Thailand); Biscos, Yves; Garcia, Nicolas; Lavergne, Gerard [ONERA/DMAE, Toulouse (France); Mees, Loic; Gouesbet, Gerard; Grehan, Gerard [CNRS/Universite et INSA de Rouen, UMR 6614/CORIA, BP12, 76 800, Saint Etienne du Rouvray CEDEX (France)
2007-10-15
The rainbow refractrometry, under its different configurations (classical and global), is an attractive technique to extract information from droplets in evaporation such as diameter and temperature. Recently a new processing strategy has been developed which increases dramatically the size and refractive index measurements accuracy for homogeneous droplets. Nevertheless, for mono component as well as for multicomponent droplets, the presence of temperature and/or of concentration gradients induce the presence of a gradient of refractive index which affects the interpretation of the recorded signals. In this publication, the effect of radial gradient on rainbow measurements with a high accuracy never reached previously is quantified. (orig.)
PRECONDITIONED SPECTRAL PROJECTED GRADIENT METHOD ON CONVEX SETS
Institute of Scientific and Technical Information of China (English)
Lenys Bello; Marcos Raydan
2005-01-01
The spectral gradient method has proved to be effective for solving large-scale unconstrained optimization problems. It has been recently extended and combined with the projected gradient method for solving optimization problems on convex sets. This combination includes the use of nonmonotone line search techniques to preserve the fast local convergence. In this work we further extend the spectral choice of steplength to accept preconditioned directions when a good preconditioner is available. We present an algorithm that combines the spectral projected gradient method with preconditioning strategies to increase the local speed of convergence while keeping the global properties. We discuss implementation details for solving large-scale problems.
Redistribution of ruthenium in UO2 in a temperature gradient
International Nuclear Information System (INIS)
The redistribution of Ru in UO2 in a thermal gradient is substantial, with Ru moving up the temperature gradient. The apparent heat of transport of Ru in UO2 is negative. This is believed to be the same mechanism which causes fission product Ru to redistribute in oxide fuels. The tungsten crucible reduces stoichiometric urania, and the oxygen in UO2 under steep temperature gradient moves down the temperature. The heat of transport of oxygen vacancy in UO2 is -138 +- 53 KJ/mole
Imaging the Buried Chicxulub Crater with Gravity Gradients and Cenotes
Hildebrand, A. R.; Pilkington, M.; Halpenny, J. F.; Ortiz-Aleman, C.; Chavez, R. E.; Urrutia-Fucugauchi, J.; Connors, M.; Graniel-Castro, E.; Camara-Zi, A.; Vasquez, J.
1995-09-01
Differing interpretations of the Bouguer gravity anomaly over the Chicxulub crater, Yucatan Peninsula, Mexico, have yielded diameter estimates of 170 to 320 km. Knowing the crater's size is necessary to quantify the lethal perturbations to the Cretaceous environment associated with its formation. The crater's size (and internal structure) is revealed by the horizontal gradient of the Bouguer gravity anomaly over the structure, and by mapping the karst features of the Yucatan region. To improve our resolution of the crater's gravity signature we collected additional gravity measurements primarily along radial profiles, but also to fill in previously unsurveyed areas. Horizontal gradient analysis of Bouguer gravity data objectively highlights the lateral density contrasts of the impact lithologies and suppresses regional anomalies which may obscure the gravity signature of the Chicxulub crater lithologies. This gradient technique yields a striking circular structure with at least 6 concentric gradient features between 25 and 85 km radius. These features are most distinct in the southwest probably because of denser sampling of the gravity field. Our detailed profiles detected an additional feature and steeper gradients (up to 5 mGal/km) than the original survey. We interpret the outer four gradient maxima to represent concentric faults in the crater's zone of slumping as is also revealed by seismic reflection data. The inner two probably represent the margin of the central uplift and the peak ring and or collapsed transient cavity. Radial gradients in the SW quadrant over the inferred ~40 km-diameter central uplift (4) may represent structural "puckering" as revealed at eroded terrestrial craters. Gradient features related to regional gravity highs and lows are visible outside the crater, but no concentric gradient features are apparent at distances > 90 km radius. The marginal gradient features may be modelled by slump faults as observed in large complex craters on
Some practical aspects of B(0) gradient pulses.
Czisch, M; Ross, A; Cieslar, C; Holak, T A
1996-03-01
Pulsed field gradients used together with trim pulses may cause artifacts in NMR spectra that originate from partial refocusing of dephased magnetization. These effects can reduce the efficiency of solvent suppression. The duration of the trim and PFG pulses should be in the range in which refocusing is negligible. Background gradients due to bad shimming also interfere with the B(0) field gradient pulses, producing gradient-recalled echoes that reduce the receiver gain for NMR experiments. The shim settings can be optimized using simple experiments, as described in this paper. Eddy currents that cannot be completely compensated by adjustments of preemphasis induce phase shifts in NMR signals. The decay constants for a given spectrometer setup can easily be measured. If the experiment does not allow for proper compensation delays, the phase of the pulses must be adjusted to compensate for these phase shifts. PMID:22911007
Bacterial pleomorphism and competition in a relative humidity gradient
de Goffau, Marcus C.; Yang, Xiaomei; van Dijl, Jan Maarten; Harmsen, Hermie J. M.
2009-01-01
The response of different bacterial species to reduced water availability was studied using a simple relative humidity gradient technique. Interestingly, distinct differences in morphology and growth patterns were observed between populations of the same species growing at different relative humidit
Image Variational Denoising Using Gradient Fidelity on Curvelet Shrinkage
Directory of Open Access Journals (Sweden)
Roysam Badrinath
2010-01-01
Full Text Available A new variational image model is presented for image restoration using a combination of the curvelet shrinkage method and the total variation (TV functional. In order to suppress the staircasing effect and curvelet-like artifacts, we use the multiscale curvelet shrinkage to compute an initial estimated image, and then we propose a new gradient fidelity term, which is designed to force the gradients of desired image to be close to the curvelet approximation gradients. Then, we introduce the Euler-Lagrange equation and make an investigation on the mathematical properties. To improve the ability of preserving the details of edges and texture, the spatial-varying parameters are adaptively estimated in the iterative process of the gradient descent flow algorithm. Numerical experiments demonstrate that our proposed method has good performance in alleviating both the staircasing effect and curvelet-like artifacts, while preserving fine details.
Conditioning the full waveform inversion gradient to welcome anisotropy
Alkhalifah, Tariq Ali
2014-08-05
Multi-parameter full waveform inversion (FWI) suffers from the complex nonlinearity in the objective function, compounded by the eventual tradeoff between the model parameters. A hierarchical approach based on frequency and arrival time data decimation to maneuver the complex nonlinearity associated with this problem usually falls short in anisotropic media. In place of data decimation, I use a model gradient filter approach to access the parts of the gradient more suitable to combat the potential nonlinearity and parameter trade off. The filter is based on representing the gradient in the time-lag normalized domain in which the small scattering angles of the gradient update is initially muted out. A model update hierarchical filtering strategy includes applying varying degree of filtering to the different parameter updates. A feature not easily accessible to simple data decimation. Using both FWI and reection based FWI (RFWI), two strategies to combat the tradeoff between anisotropic parameters are outlined.
Comparative Studies of High-Gradient Rf and Dc Breakdowns
Kovermann, Jan Wilhelm; Wuensch, Walter
2010-01-01
The CLIC project is based on normal-conducting high-gradient accelerating structures with an average accelerating gradient of 100 MV/m. The maximum achievable gradient in these structures is limited by the breakdown phenomenon. The physics of breakdowns is not yet fully understood quantitatively. A full knowledge could have strong impact on the design, material choice and construction of rf structures. Therefore, understanding breakdowns has great importance to reaching a gradient of 100MV/m with an acceptable breakdown probability. This thesis addresses the physics underlying the breakdown effect, focusing on a comparison of breakdowns in rf structures and in a dc spark setup. The dc system is simpler, easier to benchmark against simulations, with a faster turnaround time, but the relationship to rf breakdown must be established. To do so, an experimental approach based on optical diagnostics and electrical measurements methods was made. Following an introduction into the CLIC project, a general theoretical ...
Gradient Bundle Analysis: A Full Topological Approach to Chemical Bonding
Morgenstern, Amanda
2016-01-01
The "chemical bond" is a central concept in molecular sciences, but there is no consensus as to what a bond actually is. Therefore, a variety of bonding models have been developed, each defining the structure of molecules in a different manner with the goal of explaining and predicting chemical properties. This thesis describes the initial development of gradient bundle analysis (GBA), a chemical bonding model that creates a high resolution picture of chemical interactions within the charge density framework. GBA is based on concepts from the quantum theory of atoms in molecules (QTAIM), but uses a more complete picture of the topology and geometry of the electron charge density to understand and predict bonding interactions. Gradient bundles are defined as volumes bounded by zero-flux surfaces (ZFSs) in the gradient of the charge density with well-defined energies. The structure of gradient bundles provides an avenue for detecting the locations of valence electrons, which correspond to reactive regions in a ...
Simulation of ion-temperature-gradient turbulence in tokamaks
International Nuclear Information System (INIS)
Results are presented from nonlinear gyrokinetic simulations of toroidal ion temperature gradient (ITG) turbulence and transport. The ion thermal fluxes are found to have an offset linear dependence on the temperature gradient and are significantly lower than gyrofluid or IFS-PPPL-model predictions. A new phenomenon of nonlinear effective critical gradients larger than the linear instability threshold gradients is observed, and is associated with undamped flux-surface-averaged shear flows. The nonlinear gyrokinetic codes have passed extensive tests which include comparison against independent linear calculations, a series of nonlinear convergence tests, and a comparison between two independent nonlinear gyrokinetic codes. Our most realistic simulations to date used actual reconstructed equilibria from experiments and a model for dilution by impurity and beam ions. These simulations highlight the importance of both self-generated and external ExB flow shear as well as the need for still more physics to be included. (author)
Metallicity Gradients in Disks: Do Galaxies Form Inside-Out?
Pilkington, K; Gibson, B K; Calura, F; Michel-Dansac, L; Thacker, R J; Molla, M; Matteucci, F; Rahimi, A; Kawata, D; Kobayashi, C; Brook, C B; Stinson, G S; Couchman, H M P; Bailin, J; Wadsley, J
2012-01-01
We examine radial and vertical metallicity gradients using a suite of disk galaxy simulations, supplemented with two classic chemical evolution approaches. We determine the rate of change of gradient and reconcile differences between extant models and observations within the `inside-out' disk growth paradigm. A sample of 25 disks is used, consisting of 19 from our RaDES (Ramses Disk Environment Study) sample, realised with the adaptive mesh refinement code RAMSES. Four disks are selected from the MUGS (McMaster Unbiased Galaxy Simulations) sample, generated with the smoothed particle hydrodynamics (SPH) code GASOLINE, alongside disks from Rahimi et al. (GCD+) and Kobayashi & Nakasato (GRAPE-SPH). Two chemical evolution models of inside-out disk growth were employed to contrast the temporal evolution of their radial gradients with those of the simulations. We find that systematic differences exist between the predicted evolution of radial abundance gradients in the RaDES and chemical evolution models, comp...
Surface Tension Gradients Induced by Temperature: The Thermal Marangoni Effect
Gugliotti, Marcos; Baptisto, Mauricio S.; Politi, Mario J.
2004-01-01
Surface tensions gradients were generated in a thin liquid film because of the local increase in temperature, for demonstration purposes. This is performed using a simple experiment and allows different alternatives for heat generation to be used.
Presence and significance of temperature gradients among different ovarian tissues
DEFF Research Database (Denmark)
Hunter, Ronald H.; Einer-Jensen, Niels; Greve, Torben
2006-01-01
After recalling male gonadal physiology in respect of tissue temperatures within the scrotal sac, and raising questions concerning abdominal testes, attention turned to mature Graafian follicles and ovarian stroma. Temperature gradients between such tissues were summarized for human, rabbit, pig,...
On the combined gravity gradient modeling for applied geophysics
Veryaskin, Alexey
2007-01-01
Gravity gradiometry research and development has intensified in recent years to the extent that technologies providing a resolution of about 1 Eotvos per 1 sec average shall likely soon be available for multiple critical applications such as natural resources exploration, oil reservoir monitoring and defence establishment. Much of the content of this paper was composed a decade ago, and only minor modifications were required for the conclusions to be just as applicable today. In this paper we demonstrate how gravity gradient data can be modeled, and show some examples of how gravity gradient data can be combined in order to extract valuable information. In particular, this study demonstrates the importance of two gravity gradient components, Txz and Tyz which, when processed together, can provide more information on subsurface density contrasts than that derived solely from the vertical gravity gradient (Tzz).
Predicting for Sustainable Insurance with Adaptive Gradient Methods
Directory of Open Access Journals (Sweden)
Parveen Sehgal
2015-07-01
Full Text Available This paper extends the comparison of gradient based training methods used in the construction of prediction models based upon neural network, for sustainable insurance. Here adaptive gradient based techniques are compared with simple first order gradient based technique and with some second order training techniques for learning of the network. Convergence towards minimum error, for a number of first and second order algorithms are compared while utilizing data taken from live data warehouse of life insurance. Method of back propagation of errors is adopted for training of multilayer feed forward networks, while employing these gradient based algorithms of training error reduction. This paper is extended version of the paper presented in IEEE Conference INDIACom-2014.
Spatial gradients of polychlorinated biphenyls (PCBs) and organochlorine pesticides
National Oceanic and Atmospheric Administration, Department of Commerce — Spatial gradients of polychlorinated biphenyls (PCBs) and organochlorine pesticides were examined in the young-of-the-year (YOY) blue多sh collected in the vicinity...
Face recognition with histograms of fractional differential gradients
Yu, Lei; Ma, Yan; Cao, Qi
2014-05-01
It has proved that fractional differentiation can enhance the edge information and nonlinearly preserve textural detailed information in an image. This paper investigates its ability for face recognition and presents a local descriptor called histograms of fractional differential gradients (HFDG) to extract facial visual features. HFDG encodes a face image into gradient patterns using multiorientation fractional differential masks, from which histograms of gradient directions are computed as the face representation. Experimental results on Yale, face recognition technology (FERET), Carnegie Mellon University pose, illumination, and expression (CMU PIE), and A. Martinez and R. Benavente (AR) databases validate the feasibility of the proposed method and show that HFDG outperforms local binary patterns (LBP), histograms of oriented gradients (HOG), enhanced local directional patterns (ELDP), and Gabor feature-based methods.
Calculation of transitional boundary layer under pressure gradient
International Nuclear Information System (INIS)
A modified κ-ε model is proposed for calculation of transitional boundary-layer flows under pressure gradient with high freestream turbulence intensity. In order to develop the model for this problem, the flow is divided into three regions; pre-transition region, transition region and fully turbulent region. The effect of pressure gradient is taken into account in a stream-wise intermittency factor, bridging the eddy-viscosities between in the pre-transition region and in the fully turbulent region. From intermittency data in various flows, Narashima's intermittency function, F(γ), has been found to be proportional to xn according to the extent of pressure gradient. Three empirical correlations of intermittency factor being analyzed, the best one was chosen to calculate three benchmark cases of bypass transition under pressure gradient. It was found that the variations of skin friction and shape factor as well as the profiles of mean velocity in the transition region were very satisfactorily predicted
Formation of actin networks in microfluidic concentration gradients
Strelnikova, Natalja; Herren, Florian; Schoenenberger, Cora-Ann; Pfohl, Thomas
2016-05-01
The physical properties of cytoskeletal networks are contributors in a number of mechanical responses of cells including cellular deformation and locomotion, and are crucial for the proper action of living cells. Local chemical gradients modulate cytoskeletal functionality including the interactions of the cytoskeleton with other cellular components. Actin is a major constituent of the cytoskeleton. Introducing a microfluidic-based platform, we explored the impact of concentration gradients on the formation and structural properties of actin networks. Microfluidics-controlled flow-free steady state experimental conditions allow for the generation of chemical gradients of different profiles, such as linear or step-like. We discovered specific features of actin networks emerging in defined gradients. In particular, we analyzed the effects of spatial conditions on network properties, bending rigidities of network links, and the network elasticity.
Scattering angle base filtering of the inversion gradients
Alkhalifah, Tariq Ali
2014-01-01
Full waveform inversion (FWI) requires a hierarchical approach based on the availability of low frequencies to maneuver the complex nonlinearity associated with the problem of velocity inversion. I develop a model gradient filter to help us access the parts of the gradient more suitable to combat this potential nonlinearity. The filter is based on representing the gradient in the time-lag normalized domain, in which low scattering angles of the gradient update are initially muted. The result are long-wavelength updates controlled by the ray component of the wavefield. In this case, even 10 Hz data can produce near zero wavelength updates suitable for a background correction of the model. Allowing smaller scattering angle to contribute provides higher resolution information to the model.
On Locally Conformally Flat Gradient Shrinking Ricci Solitons
Cao, Xiaodong; Wang, Biao; Zhang, Zhou
2008-01-01
In this paper, we first apply an integral identity on Ricci solitons to prove that closed locally conformally flat gradient Ricci solitons are of constant sectional curvature. We then generalize this integral identity to complete noncompact gradient shrinking Ricci solitons, under the conditions that the Ricci curvature is bounded from below and the Riemannian curvature tensor has at most exponential growth. As a consequence of this identity, we classify complete locally conformally flat grad...
An Expression for the Temperature Gradient in Chaotic Fields
Energy Technology Data Exchange (ETDEWEB)
S.R. Hudson
2008-12-22
A coordinate system adapted to the invariant structures of chaotic magnetic fields is constructed. The coordinates are based on a set of ghost-surfaces, defined via an action-gradient flow between the minimax and minimizing periodic orbits. The construction of the chaotic coordinates allows an expression describing the temperature gradient across a chaotic magnetic field to be derived. The results are in close agreement with a numerical calculation.
A NOTE ON THE NONLINEAR CONJUGATE GRADIENT METHOD
Institute of Scientific and Technical Information of China (English)
Yu-hong Dai; Ya-xiang Yuan
2002-01-01
The conjugate gradient method for unconstrained optimization problems varies with a scalar. In this note, a general condition concerning the scalar is given, which ensures the global convergence of the method in the case of strong Wolfe line searches. It is also discussed how to use the result to obtain the convergence of the famous Fletcher-Reeves, and Polak-Ribiere-Polyak conjugate gradient methods. That the condition cannot be relaxed in some sense is mentioned.
Variability study of Si nanowire FETs with different junction gradients
Jun-Sik Yoon; Kihyun Kim; Taiuk Rim; Chang-Ki Baek
2016-01-01
Random dopant fluctuation effects of gate-all-around Si nanowire field-effect transistors (FETs) are investigated in terms of different diameters and junction gradients. The nanowire FETs with smaller diameters or shorter junction gradients increase relative variations of the drain currents and the mismatch of the drain currents between source-drain and drain-source bias change in the saturation regime. Smaller diameters decreased current drivability critically compared to standard deviations...
Electrochemical proton gradient in Micrococcus lysodeikticus cells and membrane vesicles.
Friedberg, I.; Kaback, H R
1980-01-01
Using the distribution of weak acids to measure the pH gradient (delta pH; interior alkaline) and the distribution of the lipophilic cation [3H]tetraphenylphosphonium+ to monitor the membrane potential (delta psi; interior negative), we studied the electrochemical gradient or protons (delta mu- H+) across the membrane of Micrococcus lysodeikticus cells and plasma membrane vesicles. With reduced phenazine methosulfate as electron donor, intact cells exhibited a relatively constant delta mu- H+...
Universal fast gradient method for stochastic composit optimization problems
Gasnikov, Alexander; Nesterov, Yurii
2016-01-01
We propose a new simple variant of Fast Gradient Method that requires only one projection per iteration. We called this method Triangle Method (TM) because it has a corresponding geometric description. We generalize TM for convex and strictly convex composite optimization problems. Then we propose Universal Triangle Method (UTM) for convex and strictly convex composite optimization problems (see Yu. Nesterov, Math. Program. 2015. for more details about what is Universal Fast Gradient Method)....
Applying dual gradient drilling in complex wells, challenges and benefits
Wærnes, Kristian
2013-01-01
Dual gradient drilling is a manage pressure drilling technique that may extend viability of deep and ultra- deep water drilling and production, in a manner that may be classified as safe or safer, than what can be achieved by conventional means. DGD is especially beneficial in wells with difficult wellbore targets, often characterized by narrow pressure windows. Dual gradient offers the potential to reach the target depth using fewer casing strings, potentially ending up with a hole better su...
Three types of gradients in the saline ecosystem
Piernik, Agnieszka
2003-01-01
The aim of this study was to combine saline ecosystem structure and function by three aspects of the gradient concept: spatial, temporal and functional. The saline meadow was investigated in the vicinity of soda factory in Janikowo in the Kujawy region, central Poland. Three vegetation zones in the salinity gradient were distinguished on the meadow: the Sa/icornia europaea zone, the Puccinellia distans zone and the Elymus repens zone. The results demonstrated that taking into account spat...
Gradient flow approach to geometric convergence analysis of preconditioned eigensolvers
Knyazev, Andrew V.; Neymeyr, Klaus
2008-01-01
Preconditioned eigenvalue solvers (eigensolvers) are gaining popularity, but their convergence theory remains sparse and complex. We consider the simplest preconditioned eigensolver--the gradient iterative method with a fixed step size--for symmetric generalized eigenvalue problems, where we use the gradient of the Rayleigh quotient as an optimization direction. A sharp convergence rate bound for this method has been obtained in 2001--2003. It still remains the only known such bound for any o...
The effects of load distribution and gradient on load carriage
2010-01-01
The objective of this research was to evaluate the effects of load distribution and gradient on military personnel while wearing a backpack. A secondary objective was to identify anatomical locations most affected during this task, and to verify that one load configuration may not be suitable for all individuals, especially when the activity is conducted on multiple gradients. Participants were asked to simulate the common military task of road marching on a treadmill while wearing a back...
Optical Color Gradients in Star-Forming Ring Galaxies
Korchagin, V.; Mayya, Y. D.; Vorobyov, E. I.
2001-01-01
We compute radial color gradients produced by an outwardly propagating circular wave of star formation and compare our results with color gradients observed in the classical ring galaxy, the ``Cartwheel''. We invoke two independent models of star formation in the ring galaxies. The first one is the conventional density wave scenario, in which an intruder galaxy creates a radially propagating density wave accompanied by an enhanced star formation following the Schmidt law. The second scenario ...
Control of a gravity gradient stabilised satellite using fuzzy logic
Aage Skullestad; Kjetil Olsen; Stein Rennehvammen; Håvard Fløystad
2001-01-01
This paper describes attitude control of a small gravity gradient stabilised satellite. A gravity gradient stabilised satellite has limited stability and pointing capabilities, and magnetic coils are added in order to improve the accuracy of the attitude control. The magnetic coils are controlled using a fuzzy logic controller, based on a combination of membership functions and rules. The control of the pitch axis is separated from the roll and azimuth axes and excellent pitch angle accuracy ...
Modeling and control of a gravity gradient stabilised satellite
Aage Skullestad
1999-01-01
This paper describes attitude control, i.e., 3-axes stabilisation and pointing, of a proposed Norwegian small gravity gradient stabilized satellite to be launched into low earth orbit. Generally, a gravity gradient stabilised system has limited stability and pointing capabilities, and wheels and/or magnetic coils are added in order to improve the attitude control. The best attitude accuracy is achieved using wheels, which can give accuracies down to less than one degree, but wheels increase t...
Compatible Value Gradients for Reinforcement Learning of Continuous Deep Policies
Balduzzi, David; Ghifary, Muhammad
2015-01-01
This paper proposes GProp, a deep reinforcement learning algorithm for continuous policies with compatible function approximation. The algorithm is based on two innovations. Firstly, we present a temporal-difference based method for learning the gradient of the value-function. Secondly, we present the deviator-actor-critic (DAC) model, which comprises three neural networks that estimate the value function, its gradient, and determine the actor's policy respectively. We evaluate GProp on two c...
Adapted nested force-gradient integrators for the Schwinger model
Shcherbakov, Dmitry; Günther, Michael; Finkenrath, Jacob; Knechtli, Francesco; Peardon, Michael
2016-01-01
We study a novel class of numerical integrators, the adapted nested force-gradient schemes, used within the molecular dynamics step of the Hybrid Monte Carlo (HMC) algorithm. We test these methods in the Schwinger model on the lattice, a well known benchmark problem. We derive the analytical basis of nested force-gradient type methods and demonstrate the advantage of the proposed approach, namely reduced computational costs compared with other numerical integration schemes in HMC.
Computer simulation model of salt-gradient solar ponds
Energy Technology Data Exchange (ETDEWEB)
Panahi, Z.
1981-01-01
The mass and energy transfer processes of salt-gradient solar pond were developed into a finite element of computer model. The system represented by the model can be: (1) a non-convective salt-gradient solar pond for which the energy transfer takes place by conduction through the brine and the round beneath the pond; (2) a stratified three-zone solar pond consisting of upper and lower convective zones and a non-convective gradient zone in between. The temperature of the upper and lower convective zones are predicted in terms of the net energy input to the zones. The energy fluxes at the pond surface include: reflected and absorbed solar radiation, evaporation energy loss, net long wave radiation loss to the atmosphere, advected energy of precipitation and inflow water, and convective heat loss at the surface. The model predicts the time dependent concentration, density, and temperature gradients in the pond. The program can operate with any time step of less than or equal to 24 hours, using either average daily or variables (with the time step) values of air temperature (calculated in the model using average, maximum and minimum values) and solar radiation data. The different cases that have been studied using the model are (1) the performance of a non-insulated salt-gradient solar pond with seepage of the brine and energy exchange through the ground below the pond; (2) the performance of an insulated salt-gradient solar pond with seepage of the brine and energy exchange through the ground below the pond; (2) the performance of an insulated salt-gradient and stratified three-zone solar pond. For stratified ponds comparisons on performance are made by changing the thickness of: (1) the upper convective zone, (2) the non-convective gradient zone, and (3) the lower convective (storage) zone.
Discrete gradient methods have an energy conservation law
McLachlan, Robert I; Quispel, G. R. W.
2013-01-01
We show for a variety of classes of conservative PDEs that discrete gradient methods designed to have a conserved quantity (here called energy) also have a time-discrete conservation law. The discrete conservation law has the same conserved density as the continuous conservation law, while its flux is found by replacing all derivatives of the conserved density appearing in the continuous flux by discrete gradients.
Finite gradient elasticity and plasticity: a constitutive mechanical framework
Bertram, Albrecht
2015-11-01
Following a suggestion by Forest and Sievert (Acta Mech 160:71-111, 2003), a constitutive frame for a general gradient elastoplasticity for finite deformations is established. The basic assumptions are the principle of Euclidean invariance and the isomorphy of the elastic ranges. Both the elastic and the plastic laws include the first and the second deformation gradient. The starting point is an objective expression for the stress power.
The Shoulder Gradient in Patients with Unilateral Shoulder Impingement Syndrome
Kim, Hee-Sang; Lee, Jong Ha; Yun, Dong Hwan; Yun, Jee-Sang; Shin, Yong Won; Chon, Jinmann; Hwang, Dae Gyu
2011-01-01
Objective To investigate the relationship between the shoulder gradient and acromiohumeral interval of both shoulders in patients with unilateral shoulder impingement syndrome. Method Using the angulometer, we measured the shoulder gradient in patients with unilateral shoulder impingement syndrome in a standing position. Using the radiography, we measured the acromiohumeral interval and the angle between a vertical line and a line connecting a superior angle with an inferior angle of the scap...
Novel geometry gradient coils for MRI designed by genetic algorithm
Williams, Guy Barnett
2001-01-01
This thesis concerns the design of gradient coils for magnetic resonance imaging systems. The method of design by genetic algorithm optimisation is applied to novel gradient geometries both by use of conventional computer facilities, and, by parallelisation of the design algorithm, on a supercomputer architecture. Geometries and regions of interests which are inaccessible to analytic solution are considered, and the criteria which are difficult to include in such algorithms, such as the robus...
On the convergence analysis of the optimized gradient methods
Kim, Donghwan; Fessler, Jeffrey A.
2015-01-01
We recently proposed optimized gradient methods (OGM) that minimize smooth and convex functions with a convergence bound that is twice as small as that of Nesterov's fast gradient methods (FGM) and that have efficient formulations that are similar to Nesterov's FGM. However, the analytic convergence bound was found only for the last iterate of a secondary sequence of OGM in the previous work. This paper provides an analytic convergence bound for the primary sequence of OGM. We then discuss ad...
ac Stark gradient echo memory in cold atoms
International Nuclear Information System (INIS)
The burgeoning fields of quantum computing and quantum key distribution have created a demand for a quantum memory. The gradient echo memory scheme is a quantum memory candidate for light storage that can boast efficiencies approaching unity, as well as the flexibility to work with either two- or three-level atoms. The key to this scheme is the frequency gradient that is placed across the memory. Currently, the three-level implementation uses a Zeeman gradient and warm atoms. In this article we model an alternate gradient-creation mechanism--the ac Stark effect--to provide an improvement in the flexibility of gradient-creation and field-switching times. We propose this scheme in concert with a move to cold atoms (≅1 mK). These temperatures would increase the storage times possible, and the small ensemble volumes would enable large ac Stark shifts with reasonable laser power. We find that memory bandwidths on the order of MHz can be produced with experimentally achievable laser powers and trapping volumes, with high precision in gradient creation and switching times on the order of nanoseconds possible. By looking at the different decoherence mechanisms present in this system, we determine that coherence times on the order of tens of milliseconds are possible, as are delay-bandwidth products of approximately 50 and efficiencies over 90%.
Effect of Crustal Density Structures on GOCE Gravity Gradient Observables
Directory of Open Access Journals (Sweden)
Robert Tenzer and Pavel Novák
2013-01-01
Full Text Available We investigate the gravity gradient components corrected for major known anomalous density structures within the _ crust. Heterogeneous mantle density structures are disregarded. The gravimetric forward modeling technique is utilized to compute the gravity gradients based on methods for a spherical harmonic analysis and synthesis of a gravity field. The _ gravity gradient components are generated using the global geopotential model GOCO-03s. The topographic and stripping gravity corrections due to the density contrasts of the ocean and ice are computed from the global topographic/bathymetric model DTM2006.0 (which also includes the ice-thickness dataset. The discrete data of sediments and crust layers taken from the CRUST2.0 global crustal model are then used to apply the additional stripping corrections for sediments and remaining anomalous crustal density structures. All computations are realized globally on a one arc-deg geographical grid at a mean satellite elevation of 255 km. The global map of the consolidated crust-stripped gravity gradients reveals distinctive features which are attributed to global tectonics, lithospheric plate configuration, lithosphere structure and mantle dynamics (e.g., glacial isostatic adjustment, mantle convection. The Moho signature, which is the most pronounced signal in these refined gravity gradients, is superimposed over a weaker gravity signal of the lithospheric mantle. An interpretational quality of the computed (refined gravity gradient components is mainly limited by a low accuracy and resolution of the CRUST2.0 sediment and crustal layer data and unmodeled mantle structures.
A parametric study of adverse pressure gradient turbulent boundary layers
International Nuclear Information System (INIS)
There are many open questions regarding the behaviour of turbulent boundary layers subjected to pressure gradients and this is confounded by the large parameter space that may affect these flows. While there have been many valuable investigations conducted within this parameter space, there are still insufficient data to attempt to reduce this parameter space. Here, we consider a parametric study of adverse pressure gradient turbulent boundary layers where we restrict our attention to the pressure gradient parameter, β, the Reynolds number and the acceleration parameter, K. The statistics analyzed are limited to the streamwise fluctuating velocity. The data show that the mean velocity profile in strong pressure gradient boundary layers does not conform to the classical logarithmic law. Moreover, there appears to be no measurable logarithmic region in these cases. It is also found that the large-scale motions scaling with outer variables are energised by the pressure gradient. These increasingly strong large-scale motions are found to be the dominant contributor to the increase in turbulence intensity (scaled with friction velocity) with increasing pressure gradient across the boundary layer.
Temporal generalization gradients following an interdimensional discrimination protocol.
Vieira de Castro, Ana Catarina; Vasconcelos, Marco; Machado, Armando
2016-09-01
We investigated the effects of interdimensional discrimination training in the temporal generalization gradient. In a matching-to-sample task, pigeons learned to choose key S after a T-s houselight sample and key NS in the absence of the houselight sample. For one group of pigeons, T = 20 s; for another, T = 10 s. Subsequently, houselight duration was varied to obtain temporal generalization gradients. Results showed that (a) proportion S increased as houselight duration ranged from 0 s to T s and then remained high for houselight durations longer than T; (b) the gradients were well described by negative-exponential functions; (c) these non-flat gradients were present from the beginning of testing, and; (d) the average gradients obtained with T = 20 s and T = 10 s overlapped when plotted in relative time. We conclude that temporal control does not require explicit discrimination training along the temporal dimension, and that temporal generalization gradients obtained with an interdimensional protocol show the scalar property of timing. We discuss how these findings challenge current models of timing. PMID:26605786
Auroral E-region electron density gradients measured
Directory of Open Access Journals (Sweden)
G. Hussey
Full Text Available In the theory of E-region plasma instabilities, the ambient electric field and electron density gradient are both included in the same dispersion relation as the key parameters that provide the energy for the generation and growth of electrostatic plasma waves. While there exist numerous measurements of ionospheric electric fields, there are very few measurements and limited knowledge about the ambient electron density gradients, ∇Ne, in the E-region plasma. In this work, we took advantage of the EISCAT CP1 data base and studied statistically the vertical electron density gradient length, Lz=Ne/(dNe/dz, at auroral E-region heights during both eastward and westward electrojet conditions and different ambient electric field levels. Overall, the prevailing electron density gradients, with Lz ranging from 4 to 7 km, are found to be located below 100 km, but to move steadily up in altitude as the electric field level increases. The steepest density gradients, with Lz possibly less than 3 km, occur near 110 km mostly in the eastward electrojet during times of strong electric fields. The results and their implications are examined and discussed in the frame of the linear gradient drift instability theory. Finally, it would be interesting to test the implications of the present results with a vertical radar interferometer.Key words: Ionosphere (auroral ionosphere; ionospheric irregularities; plasma waves and instabilities
Electrical and tribological properties of gradient epoxy-graphite composites
Directory of Open Access Journals (Sweden)
J. Stabik
2008-03-01
Full Text Available Purpose: The goal of this work was to use gravity casting as a method to prepare composite material that is characterized by gradient of electrical and tribological properties. Furthermore electrical and tribological properties of composites filled with two different kinds of graphite were compared.Design/methodology/approach: In this research the method of preparing polymeric gradient composites was gravity casting. The experimental procedure focused on evaluating the electrical resistivity and coefficient of fraction (by the pin-on-disc method of gradient composites.Findings: Gravity casting method allowed to obtain materials with different percentage of graphite content in subsequent layers of composite. Moreover it was observed that values of coefficient of friction were higher for composite with SV94 graphite than for composite with PV60/95.Research limitations/implications: The main problem for this work was to obtain continuous change of properties depending on the distance from surface. The particle’s diameter distribution, shape and size of reinforcement were significant in manufacture of composites and influenced gradient of tested properties.Practical implications: Method applied in this research allowed to obtain materials that are characterized by gradient of electrical and tribological properties. Such composites find applications in electrical industry and in mechanical engineering.Originality/value: New polymeric gradient materials were developed using gravity casting technique. Electrical and tribological properties of these composites were determined depending on distance from the surface of the test piece.
Hepatic venous pressure gradients measured by duplex ultrasound
International Nuclear Information System (INIS)
AIMS: The hepatic venous pressure gradient is a major prognostic factor in portal hypertension but its measurement is complex and requires invasive angiography. This study investigated the relationship between the hepatic venous pressure gradient and a number of Doppler measurements, including the arterial acceleration index. METHOD: We measured the hepatic venous pressure gradient in 50 fasting patients at hepatic venography. Immediately afterwards, a duplex sonographic examination of the liver was performed at which multiple measurements and indices of the venous and arterial hepatic vasculature were made. RESULTS: Hepatic arterial acceleration was correlated directly with the hepatic venous pressure gradient (r = 0.83, P -2 provided a positive predictive value of 95%, a sensitivity of 65% and a specificity of 95% for detecting patients with severe portal hypertension (hepatic venous pressure gradient > 12 mmHg). A correlation between the hepatic venous pressure gradient and the congestion index of the portal vein velocity (r = 0.45,P = 0.01) and portal vein velocity (r = 0.40,P = 0.044), was also noted. CONCLUSION: Measuring the hepatic arterial acceleration index may help in the non-invasive evaluation of portal hypertension. Tasu, J.-P. et al. (2002)
Extracellular interactions and ligand degradation shape the nodal morphogen gradient
Wang, Yin; Wang, Xi; Wohland, Thorsten; Sampath, Karuna
2016-01-01
The correct distribution and activity of secreted signaling proteins called morphogens is required for many developmental processes. Nodal morphogens play critical roles in embryonic axis formation in many organisms. Models proposed to generate the Nodal gradient include diffusivity, ligand processing, and a temporal activation window. But how the Nodal morphogen gradient forms in vivo remains unclear. Here, we have measured in vivo for the first time, the binding affinity of Nodal ligands to their major cell surface receptor, Acvr2b, and to the Nodal inhibitor, Lefty, by fluorescence cross-correlation spectroscopy. We examined the diffusion coefficient of Nodal ligands and Lefty inhibitors in live zebrafish embryos by fluorescence correlation spectroscopy. We also investigated the contribution of ligand degradation to the Nodal gradient. We show that ligand clearance via degradation shapes the Nodal gradient and correlates with its signaling range. By computational simulations of gradient formation, we demonstrate that diffusivity, extra-cellular interactions, and selective ligand destruction collectively shape the Nodal morphogen gradient. DOI: http://dx.doi.org/10.7554/eLife.13879.001 PMID:27101364
Interplanetary cosmic ray radial gradients with steady state modulation models
Energy Technology Data Exchange (ETDEWEB)
Potgieter, M.S.; Le Roux, J.A.; Burger, R.A.
1989-03-01
We have used steady state modulation models of increasing complexity, with emphasis on drift models, to establish to what extent these models can simulate the observed cosmic ray integral radial gradient (energygreater than or equal to60--70 MeV/nucleon) in the heliosphere from 1977 to 1986. Special attention has been given to the apparent asymmetric behavior of the radial gradient with respect to the recent interplanetary magnetic field polarity reversal, and the remarkable constant radial gradient for the years 1977--1982. Instead of using differential intensities at specific energies, we presented integral radial gradients calculated from the computed integral intensities which made comparison with observations more realistic. We found that nondrift models had difficulties producing constant radial gradients over several years of increasing solar activity, because these models depend primarily on changes of the radial diffusion coefficient K/sub r//sub r/ to simulate an 11-year cycle and therefore produce, in general, radial gradients symmetric with respect to solar maximum activity. Making these models independent of changes in K/sub r//sub r/ needs, in our opinion, unrealistic changes in the conventional modulation parameters.
Berngardt, O I
2010-01-01
We show that the dispersion relation for gradient-drift and Farley-Buneman instabilities within the approximation of the two-fluid MHD should contain the terms which are traditionally supposed to be small. These terms are caused by taking into account divergence of particles velocity and electron density gradient along the magnetic field direction. It is shown that at heights below 115km the solution of the dispersion relation transforms into standard one, except the situations, when the electron density gradient is parallel to magnetic field or wave-vector. In these cases the traditionally neglected summands to the growth rate of the irregularities becomes significant. The additional terms depend on relative directions of electron density gradient, magnetic field and mean velocities. This leads to the different instability growth conditions at equatorial and high-latitude regions of the ionosphere. The obtained results do not contradict with the experimental data.
Growth and deformation structure of gradient and layer-gradient Ti-Al-Si-Cu-N coatings
Energy Technology Data Exchange (ETDEWEB)
Ovchinnikov, Stanislav V., E-mail: ovm@spti.tsu.ru; Pinzhin, Yurii P., E-mail: pinzhin@phys.tsu.ru [Institute of Strength Physics and Materials Science SB RAS, Tomsk, 634055 (Russian Federation); Korotaev, Alexandr D., E-mail: korotaev@phys.tsu.ru [National Research Tomsk State University, Tomsk, 634050 (Russian Federation)
2014-11-14
The features of the growth structure and modification of gradient and layer-gradient Ti-Al-Si-Cu-N coatings in the areas of deformation and fracture during indentation and scratch testing were investigated using transmission and scanning electron microscopy methods. The influence of the concentration of alloying elements and displacement potential in the substrate on the secondary sputtering, phase composition and the level of combined torsion and bending of the crystal lattice of doped TiN were determined. It was found out that the size of the crystals in deformation location bands grows with deformation of gradient nanocrystal coatings. The article shows that layer-gradient coatings combining submicrocrystalline and nanocrystalline structures have the increased plasticity and fracture toughness due to enhanced density of interfaces and formation of the soft metal phase (Cu) in the surface layer.
Growth and deformation structure of gradient and layer-gradient Ti-Al-Si-Cu-N coatings
International Nuclear Information System (INIS)
The features of the growth structure and modification of gradient and layer-gradient Ti-Al-Si-Cu-N coatings in the areas of deformation and fracture during indentation and scratch testing were investigated using transmission and scanning electron microscopy methods. The influence of the concentration of alloying elements and displacement potential in the substrate on the secondary sputtering, phase composition and the level of combined torsion and bending of the crystal lattice of doped TiN were determined. It was found out that the size of the crystals in deformation location bands grows with deformation of gradient nanocrystal coatings. The article shows that layer-gradient coatings combining submicrocrystalline and nanocrystalline structures have the increased plasticity and fracture toughness due to enhanced density of interfaces and formation of the soft metal phase (Cu) in the surface layer
Bresolin, Fabio
2015-01-01
We acquired spectra of 141 HII regions in ten late-type low surface brightness galaxies (LSBGs). The analysis of the chemical abundances obtained from the nebular emission lines shows that metallicity gradients are a common feature of LSBGs, contrary to previous claims concerning the absence of such gradients in this class of galaxies. The average slope, when expressed in units of the isophotal radius, is found to be significantly shallower in comparison to galaxies of high surface brightness. This result can be attributed to the reduced surface brightness range measured across their discs, when combined with a universal surface mass density-metallicity relation. With a similar argument we explain the common abundance gradient observed in high surface brightness galaxy (HSBG) discs and its approximate dispersion. This conclusion is reinforced by our result that LSBGs share the same common abundance gradient with HSBGs, when the slope is expressed in terms of the exponential disc scale length.
McBrady, Adam D; Synovec, Robert E
2006-02-10
Typical refractive index (RI) detectors for liquid chromatography (LC) are not well suited to application with mobile phase gradient elution, due to the difficulty in correcting for the detected baseline shift during the gradient. We report a sensitive, highly reproducible, microfabricated refractive index gradient (micro-RIG) detector that performs well with mobile phase gradient elution LC. Since the micro-RIG signal remains on-scale throughout the mobile phase gradient, one can apply a baseline correction procedure. We demonstrate that by collecting two mobile phase gradient blanks and subtracting one of them from the other, a reproducible, flat baseline is achieved. Therefore, subtracting a blank from a separation provides a baseline corrected chromatogram with reasonably high signal-to-noise ratio for eluting analytes. The micro-RIG detector uses a collimated diode laser beam to optically probe a RIG formed perpendicular to the laminar flow direction within a microfabricated borosilicate glass chip. The chip-based design of the detector is suitable for either traditional bench-top or LC-on-a-chip technologies. We report reversed phase high performance liquid chromatography (RP-HPLC) separations of proteins and polymers, over mobile phase gradient conditions of 67% A:33% B to 3% A:97% B by volume, where A is 96% methanol:3.9% water:0.1% trifluoroacetic acid (TFA), and B is 3.9% methanol:96% water:0.1% TFA. The separations were performed on a Jupiter 5 mu C4 300 A 150 mm x 1.0 mm Phenomenex column at a flow rate of 20 microl/min. Viscosity changes during the mobile phase gradient separation are found to shift the on-chip merge position of the detected concentration gradient (i.e., RIG), in a reproducible fashion. However, this viscosity effect makes detection sensitivity vary throughout the mobile phase gradient, due to moving the optimized position of the probe beam in relation to the analyte concentration gradient being probed. None-the-less, consistent limits
Thermally tailored gradient topography surface on elastomeric thin films.
Roy, Sudeshna; Bhandaru, Nandini; Das, Ritopa; Harikrishnan, G; Mukherjee, Rabibrata
2014-05-14
We report a simple method for creating a nanopatterned surface with continuous variation in feature height on an elastomeric thin film. The technique is based on imprinting the surface of a film of thermo-curable elastomer (Sylgard 184), which has continuous variation in cross-linking density introduced by means of differential heating. This results in variation of viscoelasticity across the length of the surface and the film exhibits differential partial relaxation after imprinting with a flexible stamp and subjecting it to an externally applied stress for a transient duration. An intrinsic perfect negative replica of the stamp pattern is initially created over the entire film surface as long as the external force remains active. After the external force is withdrawn, there is partial relaxation of the applied stresses, which is manifested as reduction in amplitude of the imprinted features. Due to the spatial viscoelasticity gradient, the extent of stress relaxation induced feature height reduction varies across the length of the film (L), resulting in a surface with a gradient topography with progressively varying feature heights (hF). The steepness of the gradient can be controlled by varying the temperature gradient as well as the duration of precuring of the film prior to imprinting. The method has also been utilized for fabricating wettability gradient surfaces using a high aspect ratio biomimetic stamp. The use of a flexible stamp allows the technique to be extended for creating a gradient topography on nonplanar surfaces as well. We also show that the gradient surfaces with regular structures can be used in combinatorial studies related to pattern directed dewetting. PMID:24697617
Microstructured segmented Paul trap with tunable magnet field gradient
International Nuclear Information System (INIS)
Strings of laser cooled ions stored in microstructured Paul traps (microtraps) have promising potential for quantum information science. They provide a system which can be screened from a decohering environment, accurately prepared, manipulated and state selectively detected with efficiency close to unity. Magnetic field gradients allow for addressing trapped ions in frequency space. Furthermore, coupling of the ions' motional and spin states and long range spin-spin coupling of the ions' internal states are induced by such a gradient. This method is called Magnetic Gradient Induced Coupling, MAGIC. In this thesis, the design, construction and first characterization of a novel microtrap with an integrated solenoid is reported. The solenoid is designed to create a high magnetic field gradient per dissipated heat. The microtrap consists of three layers stacked onto each other. The outer layers provide a trapping potential, while the inner layer creates the switchable magnetic field gradient. Another specialty of this trap is the 33 pairs of DC-electrodes, allowing to move the ions along the trap axis and to adjust the range and the strength of the ions' spin-spin interactions. The microtrap is fixed on top of a ceramic block that provides the necessary electrical connections via thick film printed wires, a technique adopted in the context of microtraps for the first time, and in addition acts as a vacuum interface. The volume of the vacuum chamber is quite small, allowing for pressures in the low 10-11 mbar range. In this microtrap, 172Yb+-ions are trapped, cooled and shuttled over a distance of about 2 mm. Trapped ions are used as magnetic field gradient probes, with a relative magnetic field precision of ΔB/B0=7.10-6. The addressing of two ions with the MAGIC method in the solenoid's magnetic field gradient is demonstrated.
Gradients in the number of species at reef-seagrass ecotones explained by gradients in abundance.
Tuya, Fernando; Vanderklift, Mathew A; Wernberg, Thomas; Thomsen, Mads S
2011-01-01
Gradients in the composition and diversity (e.g. number of species) of faunal assemblages are common at ecotones between juxtaposed habitats. Patterns in the number of species, however, can be confounded by patterns in abundance of individuals, because more species tend to be found wherever there are more individuals. We tested whether proximity to reefs influenced patterns in the composition and diversity ('species density' = number of species per area and 'species richness' = number of species per number of individuals) of prosobranch gastropods in meadows of two seagrasses with different physiognomy: Posidonia and Amphibolis. A change in the species composition was observed from reef-seagrass edges towards the interiors of Amphibolis, but not in Posidonia meadows. Similarly, the abundance of gastropods and species density was higher at edges relative to interiors of Amphibolis meadows, but not in Posidonia meadows. However, species richness was not affected by proximity to reefs in either type of seagrass meadow. The higher number of species at the reef-Amphibolis edge was therefore a consequence of higher abundance, rather than species richness per se. These results suggest that patterns in the composition and diversity of fauna with proximity to adjacent habitats, and the underlying processes that they reflect, likely depend on the physiognomy of the habitat. PMID:21629654
Gradients in the Number of Species at Reef-Seagrass Ecotones Explained by Gradients in Abundance
Tuya, Fernando; Vanderklift, Mathew A.; Wernberg, Thomas; Thomsen, Mads S.
2011-01-01
Gradients in the composition and diversity (e.g. number of species) of faunal assemblages are common at ecotones between juxtaposed habitats. Patterns in the number of species, however, can be confounded by patterns in abundance of individuals, because more species tend to be found wherever there are more individuals. We tested whether proximity to reefs influenced patterns in the composition and diversity (‘species density’ = number of species per area and ‘species richness’ = number of species per number of individuals) of prosobranch gastropods in meadows of two seagrasses with different physiognomy: Posidonia and Amphibolis. A change in the species composition was observed from reef-seagrass edges towards the interiors of Amphibolis, but not in Posidonia meadows. Similarly, the abundance of gastropods and species density was higher at edges relative to interiors of Amphibolis meadows, but not in Posidonia meadows. However, species richness was not affected by proximity to reefs in either type of seagrass meadow. The higher number of species at the reef-Amphibolis edge was therefore a consequence of higher abundance, rather than species richness per se. These results suggest that patterns in the composition and diversity of fauna with proximity to adjacent habitats, and the underlying processes that they reflect, likely depend on the physiognomy of the habitat. PMID:21629654
Gradients in the number of species at reef-seagrass ecotones explained by gradients in abundance.
Directory of Open Access Journals (Sweden)
Fernando Tuya
Full Text Available Gradients in the composition and diversity (e.g. number of species of faunal assemblages are common at ecotones between juxtaposed habitats. Patterns in the number of species, however, can be confounded by patterns in abundance of individuals, because more species tend to be found wherever there are more individuals. We tested whether proximity to reefs influenced patterns in the composition and diversity ('species density' = number of species per area and 'species richness' = number of species per number of individuals of prosobranch gastropods in meadows of two seagrasses with different physiognomy: Posidonia and Amphibolis. A change in the species composition was observed from reef-seagrass edges towards the interiors of Amphibolis, but not in Posidonia meadows. Similarly, the abundance of gastropods and species density was higher at edges relative to interiors of Amphibolis meadows, but not in Posidonia meadows. However, species richness was not affected by proximity to reefs in either type of seagrass meadow. The higher number of species at the reef-Amphibolis edge was therefore a consequence of higher abundance, rather than species richness per se. These results suggest that patterns in the composition and diversity of fauna with proximity to adjacent habitats, and the underlying processes that they reflect, likely depend on the physiognomy of the habitat.
Combinatorial MAPLE gradient thin film assemblies signalling to human osteoblasts
International Nuclear Information System (INIS)
There is increased interest in smart bioactive materials to control tissue regeneration for the engineering of cell instructive scaffolds. We introduced combinatorial matrix-assisted pulsed laser evaporation (C-MAPLE) as a new method for the fabrication of organic thin films with a compositional gradient. Synchronized C-MAPLE of levan and oxidized levan was employed to assemble a two-compound biopolymer film structure. The gradient of the film composition was validated by fluorescence microscopy. In this study, we investigated the cell response induced by the compositional gradient using imaging of early osteoblast attachment and analysis of signalling phosphoprotein expression. Cells attached along the gradient in direct proportion to oxidized levan concentration. During this process distinct areas of the binary gradient have been shown to modulate the osteoblasts’ extracellular signal-regulated kinase signalling with different propensity. The proposed fabrication method results in the preparation of a new bioactive material, which could control the cell signalling response. This approach can be extended to screen new bioactive interfaces for tissue regeneration. (papers)
Combinatorial MAPLE gradient thin film assemblies signalling to human osteoblasts.
Axente, Emanuel; Sima, Felix; Elena Sima, Livia; Erginer, Merve; Eroglu, Mehmet S; Serban, Natalia; Ristoscu, Carmen; Petrescu, Stefana M; Toksoy Oner, Ebru; Mihailescu, Ion N
2014-09-01
There is increased interest in smart bioactive materials to control tissue regeneration for the engineering of cell instructive scaffolds. We introduced combinatorial matrix-assisted pulsed laser evaporation (C-MAPLE) as a new method for the fabrication of organic thin films with a compositional gradient. Synchronized C-MAPLE of levan and oxidized levan was employed to assemble a two-compound biopolymer film structure. The gradient of the film composition was validated by fluorescence microscopy. In this study, we investigated the cell response induced by the compositional gradient using imaging of early osteoblast attachment and analysis of signalling phosphoprotein expression. Cells attached along the gradient in direct proportion to oxidized levan concentration. During this process distinct areas of the binary gradient have been shown to modulate the osteoblasts' extracellular signal-regulated kinase signalling with different propensity. The proposed fabrication method results in the preparation of a new bioactive material, which could control the cell signalling response. This approach can be extended to screen new bioactive interfaces for tissue regeneration. PMID:24867882
Coastal microbial mat diversity along a natural salinity gradient.
Directory of Open Access Journals (Sweden)
Henk Bolhuis
Full Text Available The North Sea coast of the Dutch barrier island of Schiermonnikoog is covered by microbial mats that initiate a succession of plant communities that eventually results in the development of a densely vegetated salt marsh. The North Sea beach has a natural elevation running from the low water mark to the dunes resulting in gradients of environmental factors perpendicular to the beach. These gradients are due to the input of seawater at the low water mark and of freshwater from upwelling groundwater at the dunes and rainfall. The result is a natural and dynamic salinity gradient depending on the tide, rainfall and wind. We studied the microbial community composition in thirty three samples taken every ten meters along this natural salinity gradient by using denaturing gradient gel electrophoresis (DGGE of rRNA gene fragments. We looked at representatives from each Domain of life (Bacteria, Archaea and Eukarya and with a particular emphasis on Cyanobacteria. Analysis of the DGGE fingerprints together with pigment composition revealed three distinct microbial mat communities, a marine community dominated by diatoms as primary producers, an intermediate brackish community dominated by Cyanobacteria as primary producers and a freshwater community with Cyanobacteria and freshwater green algae.
Variation of hydraulic gradient in nonlinear finite strain consolidation
Institute of Scientific and Technical Information of China (English)
谢新宇; 黄杰卿; 王文军; 李金柱
2014-01-01
In the research field of ground water, hydraulic gradient is studied for decades. In the consolidation field, hydraulic gradient is yet to be investigated as an important hydraulic variable. So, the variation of hydraulic gradient in nonlinear finite strain consolidation was focused on in this work. Based on lab tests, the nonlinear compressibility and nonlinear permeability of Ningbo soft clay were obtained. Then, a strongly nonlinear governing equation was derived and it was solved with the finite element method. Afterwards, the numerical analysis was performed and it was verified with the existing experiment for Hong Kong marine clay. It can be found that the variation of hydraulic gradient is closely related to the magnitude of external load and the depth in soils. It is interesting that the absolute value of hydraulic gradient (AVHG) increases rapidly first and then decreases gradually after reaching the maximum at different depths of soils. Furthermore, the changing curves of AVHG can be roughly divided into five phases. This five-phase model can be employed to study the migration of pore water during consolidation.
Build Axial Gradient Field by Using Axial Magnetized Permanent Rings
Institute of Scientific and Technical Information of China (English)
无
2002-01-01
Axial magnetic field produced by an axial magnetized permanent ring was studied. For two permanent rings, if they are magnetized in the same directions, a nearly uniform axial field can be produced. If they are magnetized in opposite direction,an axial gradient magnetic field can be generated, with the field range changing from -B0 to B0. A permanent magnet with a high axial gradient field was fabricated, the measured results agree with the PANDIRA calculation very well. For wider usage,it is desirable for the field gradient to be changed. Some methods to produce the variable gradient field are presented. These kinds of axial gradient magnetic field can also be used as a beam focusing for linear accelerator if the periodic field can be produced along the beam trajectory. The axial magnetic field is something like a solenoid, large stray field will leak to the outside environment if no method is taken to control them. In this paper, one method is illustrated to shield off the outside leakage field.
Conditioning the full-waveform inversion gradient to welcome anisotropy
Alkhalifah, Tariq Ali
2015-04-23
Multiparameter full-waveform inversion (FWI) suffers from complex nonlinearity in the objective function, compounded by the eventual trade-off between the model parameters. A hierarchical approach based on frequency and arrival time data decimation to maneuver the complex nonlinearity associated with this problem usually falls short in anisotropic media. In place of data decimation, I use a model gradient filter approach to access the parts of the gradient more suitable to combat the potential nonlinearity and parameter trade-off. The filter is based on representing the gradient in the time-lag normalized domain, in which small scattering-angles of the gradient update are initially muted out. The model update hierarchical filtering strategy include applying varying degrees of filtering to the different anisotropic parameter updates, a feature not easily accessible to simple data decimation. Using FWI and reflection-based FWI, when the modeled data are obtained with the single-scattering theory, allows access to additional low model wavenumber components. Combining such access to wavenumbers with scattering-angle filters applied to the individual parameter gradients allows for multiple strategies to avoid complex FWI nonlinearity as well as the parameter trade-off.
Mathematical modelling of digit specification by a sonic hedgehog gradient
Woolley, Thomas E.
2013-11-26
Background: The three chick wing digits represent a classical example of a pattern specified by a morphogen gradient. Here we have investigated whether a mathematical model of a Shh gradient can describe the specification of the identities of the three chick wing digits and if it can be applied to limbs with more digits. Results: We have produced a mathematical model for specification of chick wing digit identities by a Shh gradient that can be extended to the four digits of the chick leg with Shh-producing cells forming a digit. This model cannot be extended to specify the five digits of the mouse limb. Conclusions: Our data suggest that the parameters of a classical-type morphogen gradient are sufficient to specify the identities of three different digits. However, to specify more digit identities, this core mechanism has to be coupled to alternative processes, one being that in the chick leg and mouse limb, Shh-producing cells give rise to digits; another that in the mouse limb, the cellular response to the Shh gradient adapts over time so that digit specification does not depend simply on Shh concentration. Developmental Dynamics 243:290-298, 2014. © 2013 Wiley Periodicals, Inc.
Application of gradient elasticity to benchmark problems of beam vibrations
Kateb, K. M.; Almitani, K. H.; Alnefaie, K. A.; Abu-Hamdeh, N. H.; Papadopoulos, P.; Askes, H.; Aifantis, E. C.
2016-04-01
The gradient approach, specifically gradient elasticity theory, is adopted to revisit certain typical configurations on mechanical vibrations. New results on size effects and scale-dependent behavior not captured by classical elasticity are derived, aiming at illustrating the usefulness of this approach to applications in advanced technologies. In particular, elastic prismatic straight beams in bending are discussed using two different governing equations: the gradient elasticity bending moment equation (fourth order) and the gradient elasticity deflection equation (sixth order). Different boundary/support conditions are examined. One problem considers the free vibrations of a cantilever beam loaded by an end force. A second problem is concerned with a simply supported beam disturbed by a concentrated force in the middle of the beam. Both problems are solved analytically. Exact free vibration frequencies and mode shapes are derived and presented. The difference between the gradient elasticity solution and its classical counterpart is revealed. The size ratio c/L (c denotes internal length and L is the length of the beam) induces significant effects on vibration frequencies. For both beam configurations, it turns out that as the ratio c/L increases, the vibration frequencies decrease, a fact which implies lower beam stiffness. Numerical examples show this behavior explicitly and recover the classical vibration behavior for vanishing size ratio c/L.
W-Cu gradient materials - processing, properties and application possibilities
International Nuclear Information System (INIS)
The functionally graded material (FGM) of tungsten with its high thermal and mechanical resistance and copper with its very high thermal and electrical conductivity and ductility expands the application fields of this material in the direction of extreme demands such as plasma facing components in fusion reactors. The PM-production of W-Cu-gradients recommends itself because of the possibility to form the gradient by the mixing of powder components, but is also demanding because of the differences in their sintering behavior and thermal expansions. W-Gu-gradient samples of different concentration profiles have been formed in layers by powder stacking in a die and continuously by centrifugal powder forming. The consolidation routes were determined by the concentration areas of the gradients and encompass liquid phase sintering, pressure assisted solid phase sintering and the application of coated Tungsten powder and sintering additives. The microstructure and the concentration profiles of the samples have been investigated metaliographically and by EDX. The influence of processing and the gradient profile of the properties have been characterized by TRS and the investigation of residual thermal stresses by neutron diffraction. (author)
Optimization in Quaternion Dynamic Systems: Gradient, Hessian, and Learning Algorithms.
Xu, Dongpo; Xia, Yili; Mandic, Danilo P
2016-02-01
The optimization of real scalar functions of quaternion variables, such as the mean square error or array output power, underpins many practical applications. Solutions typically require the calculation of the gradient and Hessian. However, real functions of quaternion variables are essentially nonanalytic, which are prohibitive to the development of quaternion-valued learning systems. To address this issue, we propose new definitions of quaternion gradient and Hessian, based on the novel generalized Hamilton-real (GHR) calculus, thus making a possible efficient derivation of general optimization algorithms directly in the quaternion field, rather than using the isomorphism with the real domain, as is current practice. In addition, unlike the existing quaternion gradients, the GHR calculus allows for the product and chain rule, and for a one-to-one correspondence of the novel quaternion gradient and Hessian with their real counterparts. Properties of the quaternion gradient and Hessian relevant to numerical applications are also introduced, opening a new avenue of research in quaternion optimization and greatly simplified the derivations of learning algorithms. The proposed GHR calculus is shown to yield the same generic algorithm forms as the corresponding real- and complex-valued algorithms. Advantages of the proposed framework are illuminated over illustrative simulations in quaternion signal processing and neural networks. PMID:26087504
Fabrication of microscale materials with programmable composition gradients.
Laval, Cédric; Bouchaudy, Anne; Salmon, Jean-Baptiste
2016-04-01
We present an original microfluidic technique coupling pervaporation and the use of Quake valves to fabricate microscale materials (∼10 × 100 μm(2) × 1 cm) with composition gradients along their longest dimension. Our device exploits pervaporation of water through a thin poly(dimethylsiloxane) (PDMS) membrane to continuously pump solutions (or dispersions) contained in different reservoirs connected to a microfluidic channel. This pervaporation-induced flow concentrates solutes (or particles) at the tip of the channel up to the formation of a dense material. The latter invades the channel as it is constantly enriched by an incoming flux of solutes/particles. Upstream Quake valves are used to select which reservoir is connected to the pervaporation channel and thus which solution (or dispersion) enriches the material during its growth. The microfluidic configuration of the pervaporation process is used to impose controlled growth along the channel thus enabling one to program spatial composition gradients using appropriate actuations of the valves. We demonstrate the possibilities offered by our technique through the fabrication of dense assemblies of nanoparticles and polymer composites with programmed gradients of fluorescent dyes. We also address the key issue of the spatial resolution of our gradients and we show that well-defined spatial modulations down to ≈50 μm can be obtained within colloidal materials, whereas gradients within polymer materials are resolved on length scales down to ≈1 mm due to molecular diffusion. PMID:26931112
Chemical Abundance Gradients in the Star-forming Ring Galaxies
Korchagin, Vladimir; Vorobyov, Eduard; Mayya, Y. D.
1999-09-01
Ring waves of star formation, propagating outward in the galactic disks, leave chemical abundance gradients in their wakes. We show that the relative [Fe/O] abundance gradients in ring galaxies can be used as a tool for determining the role of the SN Ia explosions in their chemical enrichment. We consider two mechanisms--a self-induced wave and a density wave--that can create outwardly propagating star-forming rings in a purely gaseous disk and demonstrate that the radial distribution of the relative [Fe/O] abundance gradients depends neither on the particular mechanism of the wave formation anor on the parameters of the star-forming process. We show that the [Fe/O] profile is determined by the velocity of the wave, the initial mass function, and the initial chemical composition of the star-forming gas. If the role of SN Ia explosions is negligible in the chemical enrichment, the ratio [Fe/O] remains constant throughout the galactic disk with a steep gradient at the wave front. If SN Ia stars are important in the production of cosmic iron, the [Fe/O] ratio has a gradient in the wake of the star-forming wave with the value depending on the frequency of SN Ia explosions.
Superelliptical Insert Gradient Coil with a Field Modifying Layer for Breast Imaging
Moon, Sung M.; Goodrich, K. Craig; Hadley, J. Rock; Kim, Seong-Eun; Zeng, Gengsheng L.; Morrell, Glen R.; McAlpine, Matthew A.; Chronik, Blaine A.; Parker, Dennis L.
2010-01-01
Many Magnetic Resonance Imaging (MRI) applications such as Dynamic Contrast Enhanced MRI (DCE-MRI) of the breast require high spatial and temporal resolution, and can benefit from improved gradient performance, e.g. increased gradient strength, and reduced gradient rise time. The improved gradient performance required to achieve high spatial and temporal resolution for this application may be achieved by using local insert gradients specifically designed for a target anatomy. Current flat gradient systems cannot create an imaging volume large enough to accommodate both breasts, further, their gradient fields are not homogeneous, dropping off rapidly with distance from the gradient coil surface. To attain an imaging volume adequate for bilateral breast MRI, a planar local gradient system design has been modified into a superellipse shape, creating homogeneous gradient volumes (HGVs) that are 182% (Gx), 57% (Gy), and 75% (Gz) wider (left/right direction) than those of the corresponding standard planar gradient. Adding an additional field-modifying (FM) gradient winding results in an additional improvement of the homogeneous gradient field near the gradient coil surface over the already enlarged HGVs of the superelliptical gradients (67%, 89%, and 214% for Gx, Gy, and Gz respectively). A prototype y-gradient insert has been built to demonstrate imaging and implementation characteristics of the superellipse gradient in a 3T MRI system. PMID:20939085
Simulation of a Microfluidic Gradient Generator using Lattice Boltzmann Methods
Simon, Tanaka
2013-01-01
Microfluidics provides a powerful and versatile technology to accurately control spatial and temporal conditions for cell culturing and can therefore be used to study cellular responses to gradients. Here we use Lattice Boltzmann methods (LBM) to solve both the Navier-Stokes equation (NSE) for the fluid and the coupled convection-diffusion equation (CDE) for the compounds that form the diffusion-based gradient. The design of a microfluidic chamber for diffusion-based gradients must avoid flow through the cell chamber. This can be achieved by alternately opening the source and the sink channels. The fast toggling of microfluidic valves requires switching between different boundary conditions. We demonstrate that the LBM is a powerful method for handling complex geometries, high Peclet number conditions, discontinuities in the boundary conditions, and multiphysics coupling.
Constrained optimization of gradient waveforms for generalized diffusion encoding.
Sjölund, Jens; Szczepankiewicz, Filip; Nilsson, Markus; Topgaard, Daniel; Westin, Carl-Fredrik; Knutsson, Hans
2015-12-01
Diffusion MRI is a useful probe of tissue microstructure. The conventional diffusion encoding sequence, the single pulsed field gradient, has recently been challenged as more general gradient waveforms have been introduced. Out of these, we focus on q-space trajectory imaging, which generalizes the scalar b-value to a tensor valued entity. To take full advantage of its capabilities, it is imperative to respect the constraints imposed by the hardware, while at the same time maximizing the diffusion encoding strength. We provide a tool that achieves this by solving a constrained optimization problem that accommodates constraints on maximum gradient amplitude, slew rate, coil heating and positioning of radio frequency pulses. The method's efficacy and flexibility is demonstrated both experimentally and by comparison with previous work on optimization of isotropic diffusion sequences. PMID:26583528
Two New Gradient Precondition Schemes for Full Waveform Inversion
Huang, Guanghui; Ren, Haoran
2014-01-01
We propose two preconditioned gradient direction for full waveform inversion (FWI). The first one is using time integral wavefields. The Least square problem is formulated as the time integral residual wavefields, which can partially resolve the effect of high-passed filter in the traditional gradient formula; the convergence rate is greatly accelerated. The other one is localized offset Hessian inspired by the generalized imaging condition, which provides another redundancy in the Hessian. We compare the traditional conjugate gradient scaled by the shot illumination and localized offset Hessian (actually, only diagonal part is considered here), and contrast their performance for waveform inversion. The results demonstrate the localized offset Hessian (diagonal part) can provide much more information in the subsurface, and is preferred to the layer-strip inversion.
A thermodynamic force generated by chemical gradient and adsorption reaction
Sugawara, Takeshi
2009-01-01
Biological units such as macromolecules, organelles, and cells are directed to a proper location under gradients of relevant chemicals. By considering a macroscopic element that has binding sites for a chemical adsorption reaction to occur on its surface, we show the existence of a thermodynamic force that is generated by the gradient and exerted on the element. By assuming local equilibrium and adopting the grand potential from thermodynamics, we derive a formula for such a thermodynamic force, which depends on the chemical potential gradient and Langmuir isotherm. The conditions under which the formula can be applied are demonstrated to hold in intracellular reactions. The role of the force in the partitioning of bacterial chromosome/plasmid during cell division is discussed.
Dissipation gradients of phenanthrene and pyrene in the Rice rhizosphere
Energy Technology Data Exchange (ETDEWEB)
Gao, Y.; Wu, S.C.; Yu, X.Z. [Croucher Institute for Environmental Sciences and Department of Biology, Hong Kong Baptist University, Kowloon Tong (Hong Kong); Wong, M.H., E-mail: mhwong@hkbu.edu.h [Croucher Institute for Environmental Sciences and Department of Biology, Hong Kong Baptist University, Kowloon Tong (Hong Kong); Institute of Urban Environment, Chinese Academy of Sciences, Xiamen (China)
2010-08-15
An experiment was conducted to reveal the effects of rice cultivation as well as polycyclic aromatic carbohydrates (PAHs) degrading bacterium (Acinetobacter sp.) on the dissipation gradients of two PAHs (PHE and PYR) in the rhizosphere. The results showed that the presence of rice root and bacteria significantly accelerated the dissipation rate of PHE and PYR. The root exudates contributed to the formation of dissipation gradients of PHE and PYR along the vertical direction of roots, with a higher dissipation rate in the rhizosphere and near rhizosphere zone than the soil far away the rhizosphere. - The formation of dissipation gradients of PAHs were attributed to the presence of rice root and the degrading bacteria in paddy soil.
Canopy interactions and physical stress gradients in subtidal communities.
Bennett, Scott; Wernberg, Thomas; de Bettignies, Thibaut; Kendrick, Gary A; Anderson, Robert J; Bolton, John J; Rodgers, Kirsten L; Shears, Nick T; Leclerc, Jean-Charles; Lévêque, Laurent; Davoult, Dominique; Christie, Hartvig C
2015-07-01
Species interactions are integral drivers of community structure and can change from competitive to facilitative with increasing environmental stress. In subtidal marine ecosystems, however, interactions along physical stress gradients have seldom been tested. We observed seaweed canopy interactions across depth and latitudinal gradients to test whether light and temperature stress structured interaction patterns. We also quantified interspecific and intraspecific interactions among nine subtidal canopy seaweed species across three continents to examine the general nature of interactions in subtidal systems under low consumer pressure. We reveal that positive and neutral interactions are widespread throughout global seaweed communities and the nature of interactions can change from competitive to facilitative with increasing light stress in shallow marine systems. These findings provide support for the stress gradient hypothesis within subtidal seaweed communities and highlight the importance of canopy interactions for the maintenance of subtidal marine habitats experiencing environmental stress. PMID:25975532
Influence of thermal gradient in vortex states of mesoscopic superconductors
International Nuclear Information System (INIS)
In general, the studies of finite size effects in mesoscopic superconductors have been carried out in such a way that the temperature parameter is constant in the entire system. However, we could have situations where a real sample is near a heater source, as an example. In such situations, gradients of temperature are present. On the other hand, mesoscopic superconductors are interesting systems due to the fact that they present confinement effects which influence all the vortex dynamics. Thus, in this work we studied the influence of thermal gradients on the vortex dynamics in mesoscopic superconductors. For this purposes, we used the time dependent Ginzburg-Landau equations. The thermal gradients produce an asymmetric distribution of the currents around the system which, in turn, yield interesting vortex configurations and difficult the formation of giant vortices
The pressure gradient in the human respiratory tract
Chovancová, Michaela; Elcner, Jakub
2014-03-01
Respiratory airways cause resistance to air flow during inhalation and exhalation. The pressure gradient is necessary to transport the air from the mount (or nose) to pulmonary alveoli. The knowledge of pressure gradient (i.e. respiratory airways resistance) is also needed to solve the question of aerosol deposition in the human respiratory tract. The obtained data will be used as boundary conditions for CFD simulations of aerosol transport. Understanding of aerosol transport in the human lungs can help us to determine the health hazard of harmful particles. On the other hand it can be used to set the conditions for transport of medication to the desirable place. This article deals with the description of the mathematical equations defining the pressure gradient and resistance in the bronchial three and describes the geometry used in the calculation.
Dissipation gradients of phenanthrene and pyrene in the Rice rhizosphere
International Nuclear Information System (INIS)
An experiment was conducted to reveal the effects of rice cultivation as well as polycyclic aromatic carbohydrates (PAHs) degrading bacterium (Acinetobacter sp.) on the dissipation gradients of two PAHs (PHE and PYR) in the rhizosphere. The results showed that the presence of rice root and bacteria significantly accelerated the dissipation rate of PHE and PYR. The root exudates contributed to the formation of dissipation gradients of PHE and PYR along the vertical direction of roots, with a higher dissipation rate in the rhizosphere and near rhizosphere zone than the soil far away the rhizosphere. - The formation of dissipation gradients of PAHs were attributed to the presence of rice root and the degrading bacteria in paddy soil.
Migration of inclusions in solids in stress gradients
International Nuclear Information System (INIS)
A theoretical method of assessing the influence of stress and temperature gradients on the motion of inclusions in solids is developed. In nonuniform stress fields, the stress distribution on the surface of the cavity must be calculated and transformed to a potential gradient for driving a surface atom flux. The bubble migration velocity is the first Legendre coefficient of the surface flux. Higher order components represent distortion. The stress gradient effect appears only in small-magnitude terms in the surface chemical potential, specifically in the stress effect on the solid atomic volume and in the elastic energy density. The migration velocities of spherical and faceted bubbles in solids are computed and the extent of distortion of a spherical bubble is estimated. The role of vacancy exchange with the bulk solid on the migration velocity is assessed. (author)
Bioinspired Mechanical Gradients in Cellulose Nanofibril/Polymer Nanopapers.
Wang, Baochun; Benitez, Alejandro J; Lossada, Francisco; Merindol, Remi; Walther, Andreas
2016-05-10
Mechanical gradients are important as tough joints, for strain field engineering in printable electronics, for actuators, and for biological studies, yet they are difficult to prepare and quantitatively characterize. We demonstrate the additive fabrication of gradient bioinspired nanocomposites based on stiff, renewable cellulose nanofibrils that are bottom-up toughened via a tailor-made copolymer. Direct filament writing of different nanocomposite hydrogels in patterns, and subsequent healing of the filaments into continuous films while drying leads to a variety of linear, parabolic and striped bulk gradients. In situ digital image correlation under tensile deformation reveals important differences in the strain fields regarding asymmetry and step heights of the patterns. We envisage that merging top-down and bottom-up structuring of nanocellulose hybrids opens avenues for aperiodic and multiscale, bioinspired nanocomposites with optimized combinations of stiffness and toughness. PMID:27061218
Constrained optimization of gradient waveforms for generalized diffusion encoding
Sjölund, Jens; Szczepankiewicz, Filip; Nilsson, Markus; Topgaard, Daniel; Westin, Carl-Fredrik; Knutsson, Hans
2015-12-01
Diffusion MRI is a useful probe of tissue microstructure. The conventional diffusion encoding sequence, the single pulsed field gradient, has recently been challenged as more general gradient waveforms have been introduced. Out of these, we focus on q-space trajectory imaging, which generalizes the scalar b-value to a tensor valued entity. To take full advantage of its capabilities, it is imperative to respect the constraints imposed by the hardware, while at the same time maximizing the diffusion encoding strength. We provide a tool that achieves this by solving a constrained optimization problem that accommodates constraints on maximum gradient amplitude, slew rate, coil heating and positioning of radio frequency pulses. The method's efficacy and flexibility is demonstrated both experimentally and by comparison with previous work on optimization of isotropic diffusion sequences.
Vacuum membrane distillation by microchip with temperature gradient.
Zhang, Yaopeng; Kato, Shinji; Anazawa, Takanori
2010-04-01
A multilayered microchip (25 x 95 mm) used for vacuum distillation is designed, fabricated and tested by rectification of a water-methanol mixture. The polymer chip employs a cooling channel to generate a temperature gradient along a distillation channel below, which is separated into a channel (72 microm deep) for liquid phase and a channel (72 microm deep) for vapor phase by an incorporated microporous poly(tetrafluoroethylene) (PTFE) membrane. The temperature gradient is controlled by adjusting hotplate temperature and flow rate of cooling water to make the temperatures in the stripping section higher than the increasing boiling points of the water-enriched liquids and the temperatures in the rectifying section lower than the decreasing dew points of the methanol-enriched vapors. The effects of temperature gradient, feed composition, feed flow rate and membrane pore size on the micro distillation are also investigated. A theoretical plate number up to 1.8 is achieved at the optimum conditions. PMID:20300677
Density gradients in ceramic pellets measured by computed tomography
International Nuclear Information System (INIS)
Density gradients are of fundamental importance in ceramic processing and computed tomography (CT) can provide accurate measurements of density profiles in sintered and unsintered ceramic parts. As a demonstration of this potential, the density gradients in an unsintered pellet pressed from an alumina powder were measured by CT scanning. To detect such small density gradients, the CT images must have good density resolution and be free from beam-hardening effects. This was achieved by measuring high-contrast (low-noise) images with the use of an Ir-192 isotopic source. A beam-hardening correction was applied. The resulting images are discussed relative to the transmission of forces through the powder mass during the pelletizing process
Symanzik improvement of the gradient flow in lattice gauge theories
Energy Technology Data Exchange (ETDEWEB)
Ramos, Alberto [PH-TH, CERN, Geneva (Switzerland); Sint, Stefan [Trinity College Dublin, School of Mathematics, Dublin (Ireland)
2016-01-15
We apply the Symanzik improvement programme to the 4 + 1-dimensional local re-formulation of the gradient flow in pure SU(N) lattice gauge theories. We show that the classical nature of the flow equation allows one to eliminate all cutoff effects at O(a{sup 2}), which originate either from the discretised gradient flow equation or from the gradient flow observable. All the remaining O(a{sup 2}) effects can be understood in terms of local counterterms at the zero flow-time boundary. We classify these counterterms and provide a complete set as required for on-shell improvement. Compared to the 4-dimensional pure gauge theory only a single additional counterterm is required, which corresponds to a modified initial condition for the flow equation. A consistency test in perturbation theory is passed and allows one to determine all counterterm coefficients to lowest non-trivial order in the coupling. (orig.)
Homogenization of temperature field and temperature gradient field
Institute of Scientific and Technical Information of China (English)
无
2009-01-01
The homogenization of temperature field and temperature gradient field are very important for many devices, systems and equipments, such as satellites and electronic devices. This paper discusses the distribution optimization of the limited high conductivity material with the simulated annealing algorithm to homogenize the temperature field in a two-dimensional heat conduction problem. At the same time, the temperature gradient field is homogenized with the bionic optimization method. The results show that the two optimization targets are consistent to some extent, while the bionic optimization method could save much computing time. In addition, there are threshold values for the amount of high conductivity material and the ratio of the high conductivity to the low conductivity beyond which further increasing these values brings very little improvement on the homogenization of temperature field and temperature gradient field.
A magnetic gradient induced force in NMR restricted diffusion experiments
Energy Technology Data Exchange (ETDEWEB)
Ghadirian, Bahman; Stait-Gardner, Tim; Castillo, Reynaldo; Price, William S., E-mail: w.price@uws.edu.au [Nanoscale Organisation and Dynamics Group, University of Western Sydney, Penrith, NSW 2751 (Australia)
2014-03-28
We predict that the phase cancellation of a precessing magnetisation field carried by a diffusing species in a bounded geometry under certain nuclear magnetic resonance pulsed magnetic field gradient sequences results in a small force over typically micrometre length scales. Our calculations reveal that the total magnetisation energy in a pore under the influence of a pulsed gradient will be distance-dependent thus resulting in a force acting on the boundary. It is shown that this effect of the magnetisation of diffusing particles will appear as either an attractive or repulsive force depending on the geometry of the pore and magnetic properties of the material. A detailed analysis is performed for the case of a pulsed gradient spin-echo experiment on parallel planes. It is shown that the force decays exponentially in terms of the spin-spin relaxation. The proof is based on classical electrodynamics. An application of this effect to soft matter is suggested.
Experimental and theoretical investigation of high gradient acceleration
International Nuclear Information System (INIS)
This report contains a technical progress summary of the research conducted under the auspices of DOE Grant No. DE-FG0291ER-40648. ''Experimental and Theoretical Investigations of High Gradient Acceleration.'' This grant supports three research tasks: Task A consists of the design and fabrication of a 17GHz of photocathode gun, Task B supports the testing of high gradient acceleration using a 33GHz structure, and Task C comprises theoretical investigations, both in support of the experimental tasks and on critical physics issues for the development of high energy linear colliders. This report is organized as follows. The development of an rf gun design and research progress on the picosecond laser system is summarized in Sec. 2, the status of the studies of the LBL/Haimson high gradient structure, using a 50 MW free-electron laser is summarized in Sec. 3, and theoretical research progress is described in Sec. 4. Supporting material is contained in Appendices A-G
Gradient gravitational search: An efficient metaheuristic algorithm for global optimization.
Dash, Tirtharaj; Sahu, Prabhat K
2015-05-30
The adaptation of novel techniques developed in the field of computational chemistry to solve the concerned problems for large and flexible molecules is taking the center stage with regard to efficient algorithm, computational cost and accuracy. In this article, the gradient-based gravitational search (GGS) algorithm, using analytical gradients for a fast minimization to the next local minimum has been reported. Its efficiency as metaheuristic approach has also been compared with Gradient Tabu Search and others like: Gravitational Search, Cuckoo Search, and Back Tracking Search algorithms for global optimization. Moreover, the GGS approach has also been applied to computational chemistry problems for finding the minimal value potential energy of two-dimensional and three-dimensional off-lattice protein models. The simulation results reveal the relative stability and physical accuracy of protein models with efficient computational cost. PMID:25779670
FAST NAS-RIF ALGORITHM USING ITERATIVE CONJUGATE GRADIENT METHOD
Directory of Open Access Journals (Sweden)
A.M.Raid
2014-04-01
Full Text Available Many improvements on image enhancemen have been achieved by The Non-negativity And Support constraints Recursive Inverse Filtering (NAS-RIF algorithm. The Deterministic constraints such as non negativity, known finite support, and existence of blur invariant edges are given for the true image. NASRIF algorithms iterative and simultaneously estimate the pixels of the true image and the Point Spread Function (PSF based on conjugate gradients method. NAS-RIF algorithm doesn’t assume parametric models for either the image or the blur, so we update the parameters of conjugate gradient method and the objective function for improving the minimization of the cost function and the time for execution. We propose a different version of linear and nonlinear conjugate gradient methods to obtain the better results of image restoration with high PSNR.
Free-Standing Photonic Crystal Films with Gradient Structural Colors.
Ding, Haibo; Liu, Cihui; Ye, Baofen; Fu, Fanfan; Wang, Huan; Zhao, Yuanjin; Gu, Zhongze
2016-03-23
Hydrogel colloidal crystal composite materials have a demonstrated value in responsive photonic crystals (PhCs) via controllable stimuli. Although they have been successfully exploited to generate a gradient of color distribution, the soft hydrogels have limitations in terms of stability and storage caused by dependence on environment. Here, we present a practical strategy to fabricate free-standing PhC films with a stable gradient of structural colors using binary polymer networks. A colloidal crystal hydrogel film was prepared for this purpose, with continuously varying photonic band gaps corresponding to the gradient of the press. Then, a second polymer network was used to lock the inside non-close-packed PhC structures and color distribution of the hydrogel film. It was demonstrated that our strategy could bring about a solution to the angle-dependent structural colors of the PhC films by coating the surface with special microstructures. PMID:26962967
Fabrication and evaluation of uniform and gradient density epoxies
Energy Technology Data Exchange (ETDEWEB)
Domeier, L.A.; Skala, D.M.; Goods, S.H. [and others
1997-11-01
Filled epoxy materials which vary in density in a designed manner have been fabricated and their mechanical properties evaluated. Density variations were produced by incorporating different volume fractions of either glass microballoons (GMB) or alumina. Several different sample types were evaluated including uniform density (0.8 g/cm{sup 3} < {rho} < 2.0 g/cm{sup 3}) samples and gradient density samples (GMB only, 0.8 g/cm{sup 3} < {rho} < 1.2 g/cm{sup 3}). The uniform density specimens were evaluated for the effects of filler type and concentration on modulus and toughness. Results indicated that addition of alumina filler significantly increased the resulting modulus while addition of GMB had little measurable effect. These differences could be understood in terms of the differing moduli of the additives relative to that of the epoxy matrix. In the former case the alumina particulates had a modulus much greater than that of the epoxy while in the latter case, the modulus of the GMB additive was only slightly greater than that of the matrix. Addition of either filler significantly degraded the toughness of the composite specimens and precluded the use of gradients to enhance toughness performance. Discontinuous {open_quotes}block{close_quotes} gradients used for testing were fabricated by simple sequential pours of formulations with different GMB loadings and were evaluated for modulus, strength and ductility. Continuous gradients were fabricated in process studies by programmed shifts in the peristaltic pumping/mixing ratio of epoxies filled with either alumina or GMB. None of the continuous gradient materials were mechanically tested. These results suggest that applications utilizing gradient materials containing alumina and similar high modulus fillers to provide designed stiffness rather than improved toughness are the most appropriate targets for future investigation.
Intraguild predation may reinforce a species-environment gradient
MacNeil, Calum; Dick, Jaimie T. A.
2012-05-01
Species-environment gradients are ubiquitous in nature, with studies often partially explaining the replacement of species along such gradients by autecological factors such as differential physiological tolerances. However, lacking direct evidence, the majority of studies only infer some form of inter-specific interaction, often competition, as reinforcing these gradients. There is usually the further implication that environmental factors mediate asymmetries in the interaction. Recognising the lack of explicit experimental considerations of how key inter-specific interactions are modified by the environment, we chose a study system where we were able to bring the species in question into the laboratory and conduct experiments to test hypotheses about gradient-induced asymmetries in an inter-specific interaction. To this end, we tested the hypothesis that a species-salinity gradient may be reinforced by changes in the asymmetry of intraguild predation between two species of amphipod crustaceans with wide salinity tolerances. River and estuary surveys showed that Gammarus duebeni and Gammarus zaddachi have overlapping distributions, with both surviving and reproducing in salinities ranging from freshwater to fully marine. However, the former species is relatively more abundant in low salinities and the latter in higher salinities. In the laboratory, survival of both species was high in all salinities and cannibalism occurred at low frequencies. However, intraguild predation by males on moulted females was asymmetric in favour of G. duebeni at low salinities, this asymmetry completely reversing to favour G. zaddachi at higher salinities. Thus, we provide evidence that this species-environment gradient occurs due to overlapping physiological tolerances and salinity-driven shifts in the asymmetry of a key inter-specific interaction, intraguild predation.
The effects of intraventricular gradients on left ventricular ejection dynamics.
Murgo, J P; Alter, B R; Dorethy, J F; Altobelli, S A; Craig, W E; McGranahan, G M
1983-11-01
The generation of abnormal gradients between the apical cavity and the subaortic valvular region of the left ventricle in patients with hypertrophic cardiomyopathy (HCM) has traditionally been equated to a dynamic obstruction to left ventricular outflow. To examine this concept in more detail, left ventricular ejection dynamics were studied during cardiac catheterization in 30 patients with HCM and 29 patients with no evidence of cardiovascular disease. Using multisensor catheterization techniques, ascending aortic flow velocity and micromanometer left ventricular and aortic pressures were simultaneously recorded during rest (n = 47). Dynamic left ventricular emptying was also analyzed with frame-by-frame angiography (n = 46). The temporal distribution of left ventricular outflow was independently derived from both flow velocity and angiographic techniques. The HCM patients were subdivided into three groups: I, intraventricular gradients at rest (n = 9); II, intraventricular gradients only with provocation (n = 12); III, no intraventricular gradients despite provocation (n = 9). Expressed as a precentage of the available systolic ejection period (%SEP), the time required for ejection of the total stroke volume was (mean +/- 1 S.D.): Group I, 69 +/- 17% (flow), 64 +/- 6% (angio); Group II, 63 +/- 14% (flow), 65 +/- 6% (angio); Group III, 61 +/- 16% (flow), 62 +/- 4% (angio); control group, 90 +/- 5% (flow) 86 +/- 10% (angio). No significant difference was observed between any of the three HCM subgroups, but, compared with the control group, ejection was completed much earlier in systole independent of the presence or absence of intraventricular gradients. The presence of coexisting mitral regurgitation in 12 of the HCM patients did not alter these results. This study demonstrates that 'outflow obstruction', as traditionally defined by the presence of an abnormal intraventricular pressure gradient and systolic anterior motion of the mitral valve, does not impede left
Latitudinal gradients in ecosystem engineering by oysters vary across habitats.
McAfee, Dominic; Cole, Victoria J; Bishop, Melanie J
2016-04-01
Ecological theory predicts that positive interactions among organisms will increase across gradients of increasing abiotic stress or consumer pressure. This theory has been supported by empirical studies examining the magnitude of ecosystem engineering across environmental gradients and between habitat settings at local scale. Predictions that habitat setting, by modifying both biotic and abiotic factors, will determine large-scale gradients in ecosystem engineering have not been tested, however. A combination of manipulative experiments and field surveys assessed whether along the east Australian coastline: (1) facilitation of invertebrates by the oyster Saccostrea glomerata increased across a latitudinal gradient in temperature; and (2) the magnitude of this effect varied between intertidal rocky shores and mangrove forests. It was expected that on rocky shores, where oysters are the primary ecosystem engineer, they would play a greater role in ameliorating latitudinal gradients in temperature than in mangroves, where they are a secondary ecosystem engineer living under the mangrove canopy. On rocky shores, the enhancement of invertebrate abundance in oysters as compared to bare microhabitat decreased with latitude, as the maximum temperatures experienced by intertidal organisms diminished. By contrast, in mangrove forests, where the mangrove canopy resulted in maximum temperatures that were cooler and of greater humidity than on rocky shores, we found no evidence of latitudinal gradients of oyster effects on invertebrate abundance. Contrary to predictions, the magnitude by which oysters enhanced biodiversity was in many instances similar between mangroves and rocky shores. Whether habitat-context modifies patterns of spatial variation in the effects of ecosystem engineers on community structure will depend, in part, on the extent to which the environmental amelioration provided by an ecosystem engineer replicates that of other co-occurring ecosystem engineers
Separation of colloidal two dimensional materials by density gradient ultracentrifugation
International Nuclear Information System (INIS)
Two-dimensional (2D) materials have been made through various approaches but obtaining monodispersed simply by synthesis optimization gained little success, which highlighted the need for introducing nanoseparation methods. Density gradient ultracentrifugation method has emerged as a versatile and scalable method for sorting colloidal 2D nanomaterials. Isopycnic separation was applied on thickness-dependent separation of graphene nanosheets. And rate-zonal separation, as a more versatile separation method, demonstrated its capability in sorting nanosheets of chemically modified single layered graphene, layered double hydroxide, and even metallic Ag. Establishing such density gradient ultracentrifugation method not only achieves monodispersed nanosheets and provides new opportunities for investigation on size dependent properties of 2D materials, but also makes the surface modification possible by introducing “reaction zones” during sedimentation of the colloids. - Graphical abstract: Two-dimensional (2D) materials have been made through various approaches but obtaining monodispersed simply by synthesis optimization gained little success, which highlighted the need for introducing nanoseparation methods. Density gradient ultracentrifugation method has emerged as a versatile and scalable method for sorting colloidal 2D nanomaterials according to their size of thickness difference. Establishing such density gradient ultracentrifugation method not only achieves monodispersed nanosheets and provides new opportunities for investigation on size dependent properties of 2D materials, but also makes the surface modification possible by introducing “reaction zones” during sedimentation of the colloids. - Highlights: • Density gradient ultracentrifugation was applied on size separation of 2D material. • Isopycnic separation was applied on separation of low density materials. • Rate-zonal separation was applied on separation of large density materials. • Size
Lima, Rogerio S.; Marple, Basil R.; Marcoux, P.
2016-01-01
A computer-controlled laser test rig (using a CO2 laser) offers an interesting alternative to traditional flame-based thermal gradient rigs in evaluating thermal barrier coatings (TBCs). The temperature gradient between the top and back surfaces of a TBC system can be controlled based on the laser power and a forced air back-face cooling system, enabling the temperature history of complete aircraft missions to be simulated. An air plasma spray-deposited TBC was tested and, based on experimental data available in the literature, the temperature gradients across the TBC system (ZrO2-Y2O3 YSZ top coat/CoNiCrAlY bond coat/Inconel 625 substrate) and their respective frequencies during air-to-air combat missions of fighter jets were replicated. The missions included (i) idle/taxi on the runway, (ii) take-off and climbing, (iii) cruise trajectory to rendezvous zone, (iv) air-to-air combat maneuvering, (v) cruise trajectory back to runway, and (vi) idle/taxi after landing. The results show that the TBC thermal gradient experimental data in turbine engines can be replicated in the laser gradient rig, leading to an important tool to better engineer TBCs.
Institute of Scientific and Technical Information of China (English)
吴盛海; 徐丽慧; 严杰; 王贤军
2009-01-01
目的 克隆幽门螺杆菌趋化相关基因cheA和they并构建其原核表达系统,建立幽门螺杆菌体外趋化模型并确定其趋化诱导物质,了解特异性抗体和氯氰碘柳胺对幽门螺杆菌趋化的抑制作用.方法 PCR扩增幽门螺杆菌NCTC11637株全长cheA和cheY基因片段,T-A克隆后测序.构建上述目的基因原核表达系统,采用SDS-PAGE和Bio-Rad凝胶成像分析系统检查目的重组蛋白rCheA和rCheY的表达情况,Ni-NTA亲和层析法提纯rCheA和rCheY.rCheA和rCheY免疫家兔获得抗血清,用饱和硫酸铵沉淀法和DEAE-32离子交换法提纯IsG,用免疫扩散法检测抗血清及其IsG效价.采用硬琼脂法建立幽门螺杆菌NCTC11637株体外趋化模型并检测11种物质的趋化诱导作用,同时分别观察抗rCheA IgG(rCheA-IgG)和氯氰碘柳胺钠对细菌趋化的抑制作用.结果 PCR扩增获得预期大小的cheA和cheY基因片段,其核苷酸和氨基酸序列与文献报道完全相同.所构建的原核表达系统能有效表达rCheA和rGheY.rCheA和rCheY兔抗血清及其IgG免疫扩散效价均分别为1:4和1:2.盐酸、硫酸和乙酸对该幽门螺杆菌均有趋化诱导作用,一定浓度的rCheA-IgG和氯氰碘柳胺钠均对幽门螺杆菌趋化有抑制作用(P<0.05).结论 本研究成功地构建了幽门螺杆菌NCTC11637株cheA和cheY基因原核表达系统.H~+是诱导幽门螺杆菌趋化的信号物质,rCheA-IgG和氯氰碘柳胺钠均能抑制幽门螺杆菌对H~+的趋化.%Objective To clone the cheA and cheY genes of Helicobacter pylori for construction of their prokaryotic expression systems, and to establish chemotactic model in vitro of H. pylori for determing chemotaxis-inducing substances and to understand the effects of specific antibody and closantel on inhibiting chemotactic behavior of the microbe. Methods The segments of entire cheA and cheY genes were amplified by PGR and then sequenced after T-A cloning. Prokaryotic expression systems of the
Plasmonic phase-gradient metasurface for spontaneous emission control
Langguth, L.; Schokker, A. H.; Guo, K.; Koenderink, A. F.
2015-11-01
We combine the concept of phase-gradient metasurfaces with fluorescence directionality control of an ensemble of incoherent emitters. We design a periodic metasurface to control the scattering amplitude of the lattice in momentum space. The lattice is embedded in a waveguiding layer doped with organic fluorophores. In contrast to the usual symmetric directionality that plasmonic lattices impart on emission, we find that the phase gradient translates into asymmetric directional emission into the far field, determined by scattering on a subset of the reciprocal lattice vectors. The measured asymmetry is well explained by analytical modeling.
Master equation simulation analysis of immunostained Bicoid morphogen gradient
Directory of Open Access Journals (Sweden)
Reinitz John
2007-11-01
Full Text Available Abstract Background The concentration gradient of Bicoid protein which determines the developmental pathways in early Drosophila embryo is the best characterized morphogen gradient at the molecular level. Because different developmental fates can be elicited by different concentrations of Bicoid, it is important to probe the limits of this specification by analyzing intrinsic fluctuations of the Bicoid gradient arising from small molecular number. Stochastic simulations can be applied to further the understanding of the dynamics of Bicoid morphogen gradient formation at the molecular number level, and determine the source of the nucleus-to-nucleus expression variation (noise observed in the Bicoid gradient. Results We compared quantitative observations of Bicoid levels in immunostained Drosophila embryos with a spatially extended Master Equation model which represents diffusion, decay, and anterior synthesis. We show that the intrinsic noise of an autonomous reaction-diffusion gradient is Poisson distributed. We demonstrate how experimental noise can be identified in the logarithm domain from single embryo analysis, and then separated from intrinsic noise in the normalized variance domain of an ensemble statistical analysis. We show how measurement sensitivity affects our observations, and how small amounts of rescaling noise can perturb the noise strength (Fano factor observed. We demonstrate that the biological noise level in data can serve as a physical constraint for restricting the model's parameter space, and for predicting the Bicoid molecular number and variation range. An estimate based on a low variance ensemble of embryos suggests that the steady-state Bicoid molecular number in a nucleus should be larger than 300 in the middle of the embryo, and hence the gradient should extend to the posterior end of the embryo, beyond the previously assumed background limit. We exhibit the predicted molecular number gradient together with
Gyrokinetic particle simulation of ion temperature gradient drift instabilities
Energy Technology Data Exchange (ETDEWEB)
Lee, W.W.; Tang, W.M.
1987-04-01
Ion temperature gradient drift instabilities have been investigated using gyrokinetic particle simulation techniques for the purpose of identifying the mechanisms responsible for their nonlinear saturation as well as the associated anomalous transport. For simplicity, the simulation has been carried out in a shear-free slab geometry, where the background pressure gradient is held fixed in time to represent quasistatic profiles typical of tokamak discharges. It is found that the nonlinearly generated zero-frequency responses for the ion parallel momentum and pressure are the dominant mechanisms giving rise to saturation. This is supported by the excellent agreement between the simulation results and those obtained from mode coupling calculations.
Gradient catastrophe and flutter in vortex filament dynamics
Konopelchenko, B G
2011-01-01
Gradient catastrophe and flutter instability in the motion of vortex filament within the localized induction approximation are analyzed. It is shown that the origin if this phenomenon is in the gradient catastrophe for the dispersionless Da Rios system which describes motion of filament with slow varying curvature and torsion. Geometrically this catastrophe manifests as a rapid oscillation of a filament curve in a point that resembles the flutter of airfoils. Analytically it is the elliptic umbilic singularity in the terminology of the catastrophe theory. It is demonstrated that its double scaling regularization is governed by the Painlev\\'e-I equation.
Gradient catastrophe and flutter in vortex filament dynamics
International Nuclear Information System (INIS)
Gradient catastrophe and flutter instability in the motion of a vortex filament within the localized induction approximation are analyzed. It is shown that the origin of this phenomenon is in the gradient catastrophe for the dispersionless Da Rios system which describes the motion of a filament with slow varying curvature and torsion. Geometrically, this catastrophe manifests as a rapid oscillation of a filament curve in a point that resembles the flutter of airfoils. Analytically, it is the elliptic umbilic singularity in the terminology of the catastrophe theory. It is demonstrated that its double scaling regularization is governed by the Painleve-I equation. (fast track communication)