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Sample records for chemical extraction methods

  1. Using deuterated PAH amendments to validate chemical extraction methods to predict PAH bioavailability in soils

    Energy Technology Data Exchange (ETDEWEB)

    Gomez-Eyles, Jose L., E-mail: j.l.gomezeyles@reading.ac.uk [University of Reading, School of Human and Environmental Sciences, Soil Research Centre, Reading, RG6 6DW Berkshire (United Kingdom); Collins, Chris D.; Hodson, Mark E. [University of Reading, School of Human and Environmental Sciences, Soil Research Centre, Reading, RG6 6DW Berkshire (United Kingdom)

    2011-04-15

    Validating chemical methods to predict bioavailable fractions of polycyclic aromatic hydrocarbons (PAHs) by comparison with accumulation bioassays is problematic. Concentrations accumulated in soil organisms not only depend on the bioavailable fraction but also on contaminant properties. A historically contaminated soil was freshly spiked with deuterated PAHs (dPAHs). dPAHs have a similar fate to their respective undeuterated analogues, so chemical methods that give good indications of bioavailability should extract the fresh more readily available dPAHs and historic more recalcitrant PAHs in similar proportions to those in which they are accumulated in the tissues of test organisms. Cyclodextrin and butanol extractions predicted the bioavailable fraction for earthworms (Eisenia fetida) and plants (Lolium multiflorum) better than the exhaustive extraction. The PAHs accumulated by earthworms had a larger dPAH:PAH ratio than that predicted by chemical methods. The isotope ratio method described here provides an effective way of evaluating other chemical methods to predict bioavailability. - Research highlights: > Isotope ratios can be used to evaluate chemical methods to predict bioavailability. > Chemical methods predicted bioavailability better than exhaustive extractions. > Bioavailability to earthworms was still far from that predicted by chemical methods. - A novel method using isotope ratios to assess the ability of chemical methods to predict PAH bioavailability to soil biota.

  2. Comparison of different methods for extraction from Tetraclinis articulata: yield, chemical composition and antioxidant activity.

    Science.gov (United States)

    Herzi, Nejia; Bouajila, Jalloul; Camy, Séverine; Romdhane, Mehrez; Condoret, Jean-Stéphane

    2013-12-15

    In the present study, three techniques of extraction: hydrodistillation (HD), solvent extraction (conventional 'Soxhlet' technique) and an innovative technique, i.e., the supercritical fluid extraction (SFE), were applied to ground Tetraclinis articulata leaves and compared for extraction duration, extraction yield, and chemical composition of the extracts as well as their antioxidant activities. The extracts were analyzed by GC-FID and GC-MS. The antioxidant activity was measured using two methods: ABTS(•+) and DPPH(•). The yield obtained using HD, SFE, hexane and ethanol Soxhlet extractions were found to be 0.6, 1.6, 40.4 and 21.2-27.4 g/kg respectively. An original result of this study is that the best antioxidant activity was obtained with an SFE extract (41 mg/L). The SFE method offers some noteworthy advantages over traditional alternatives, such as shorter extraction times, low environmental impact, and a clean, non-thermally-degraded final product. Also, a good correlation between the phenolic contents and the antioxidant activity was observed with extracts obtained by SFE at 9 MPa.

  3. EXTRACTION OF ASTAXANTHIN ESTERS FROM SHRIMP WASTE BY CHEMICAL AND MICROBIAL METHODS

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    A. Khanafari, A. Saberi, M. Azar, Gh. Vosooghi, Sh. Jamili, B. Sabbaghzadeh

    2007-04-01

    Full Text Available The carotenoid pigments specifically astaxanthin has many significant applications in food, pharmaceutical and cosmetic industries. The goal of this research was the extraction of Astaxanthin from a certain Persian Gulf shrimp species waste (Penaeus semisulcatus, purification and identification of the pigment by chemical and microbial methods. Microbial fermentation was obtained by inoculation of two Lactobacillus species Lb. plantarum and Lb. acidophilus in the medium culture containing shrimp waste powder by the intervention of lactose sugar, yeast extract, the composition of Both and the coolage (-20oC. The carotenoids were extracted by an organic solvent system. After purification of astaxanthin with the thin layer chromatography method by spectrophotometer, NMR and IR analysis the presence of astaxanthin esters was recognized in this specific species of Persian Gulf shrimp. Results obtained from this study showed that the coolage at –20 oC not only does not have an amplifying effect on the production of astaxanthin but also slightly reduces this effect. Also the effect of intervention of lactose sugar showed more effectiveness in producing astaxanthin than yeast extract or more than with the presence of both. The results also indicated that there is not much difference in the ability of producing the pigment by comparing both Lb. plantarum and Lb. acidophillus. Also results showed the microbial method of extraction of astaxanthin is more effective than chemical method. The pigment extracted from certain amount of shrimp powder, 23.128 mg/g, was calculated.

  4. EXTRACTION OF ASTAXANTHIN ESTERS FROM SHRIMP WASTE BY CHEMICAL AND MICROBIAL METHODS

    OpenAIRE

    A. Khanafari, A. Saberi, M. Azar, Gh. Vosooghi, Sh. Jamili, B. Sabbaghzadeh

    2007-01-01

    The carotenoid pigments specifically astaxanthin has many significant applications in food, pharmaceutical and cosmetic industries. The goal of this research was the extraction of Astaxanthin from a certain Persian Gulf shrimp species waste (Penaeus semisulcatus), purification and identification of the pigment by chemical and microbial methods. Microbial fermentation was obtained by inoculation of two Lactobacillus species Lb. plantarum and Lb. acidophilus in the medium culture containing shr...

  5. Definite influence of the extraction methods on the chemical composition of virgin olive oil

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    Aparicio, R.

    1991-10-01

    Full Text Available The extraction methods of virgin olive oil affect the quantification values of some chemical compounds. Statistical tests and procedures have been applied to a set of 142 samples collected from all over Andalusia and characterized by 55 chemical compounds. It has been estimated that two aliphatic alcohols, one sterol and one fatty acid have the best significance levels identifying the extraction methodology (pressure, centrifugation. Stepwise Lineal Discriminant procedure has been used to characterize olive oils by the extraction systems. 205 samples from other provinces, varieties or harvests were used to verify these decision equations.

    Los métodos de extracción del aceite de oliva virgen afectan a los valores de algunos de sus componentes químicos. Se han aplicado métodos estadísticos a un conjunto de 142 muestras de Andalucía caracterizadas por 55 parámetros químicos. El mayor nivel de significación para la diferenciación de los sistemas de extracción se obtuvo con dos alcoholes alifáticos, un esterol y un ácido graso. Se ha utilizado el análisis discriminante por pasos para caracterizar los aceites según su sistema de extracción. 205 muestras de distinta procedencia, variedad y cosecha han sido utilizadas para conocer la bondad de los resultados.

  6. Extraction of CYP chemical interactions from biomedical literature using natural language processing methods.

    Science.gov (United States)

    Jiao, Dazhi; Wild, David J

    2009-02-01

    This paper proposes a system that automatically extracts CYP protein and chemical interactions from journal article abstracts, using natural language processing (NLP) and text mining methods. In our system, we employ a maximum entropy based learning method, using results from syntactic, semantic, and lexical analysis of texts. We first present our system architecture and then discuss the data set for training our machine learning based models and the methods in building components in our system, such as part of speech (POS) tagging, Named Entity Recognition (NER), dependency parsing, and relation extraction. An evaluation of the system is conducted at the end, yielding very promising results: The POS, dependency parsing, and NER components in our system have achieved a very high level of accuracy as measured by precision, ranging from 85.9% to 98.5%, and the precision and the recall of the interaction extraction component are 76.0% and 82.6%, and for the overall system are 68.4% and 72.2%, respectively.

  7. Effects of extraction methods on the yield, chemical structure and anti-tumor activity of polysaccharides from Cordyceps gunnii mycelia.

    Science.gov (United States)

    Zhu, Zhen-Yuan; Dong, Fengying; Liu, Xiaocui; Lv, Qian; YingYang; Liu, Fei; Chen, Ling; Wang, Tiantian; Wang, Zheng; Zhang, Yongmin

    2016-04-20

    This study was to investigate the effects of different extraction methods on the yield, chemical structure and antitumor activity of polysaccharides from Cordyceps gunnii (C. gunnii) mycelia. Five extraction methods were used to extract crude polysaccharides (CPS), which include room-temperature water extraction (RWE), hot-water extraction (HWE), microwave-assisted extraction (MAE), ultrasound-assisted extraction (UAE) and cellulase-assisted extraction (CAE). Then Sephadex G-100 was used for purification of CPS. As a result, the antitumor activities of CPS and PPS on S180 cells were evaluated. Five CPS and purified polysaccharides (PPS) were obtained. The yield of CPS by microwave-assisted extraction (CPSMAE) was the highest and its anti-tumor activity was the best and its macromolecular polysaccharide (3000-1000kDa) ratio was the largest. The PPS had the same monosaccharide composition, but their obvious difference was in the antitumor activity and the physicochemical characteristics, such as intrinsic viscosity, specific rotation, scanning electron microscopy and circular dichroism spectra. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. Influence of origin and extraction method on argan oil physico-chemical characteristics and composition.

    Science.gov (United States)

    Hilali, Miloudi; Charrouf, Zoubida; Soulhi, Abd El Aziz; Hachimi, Larbi; Guillaume, Dominique

    2005-03-23

    Twenty one samples of argan oil of different geographical origin (Tidzi, Tamanar, Benaiznassen, Ait mzal, Ait Baha, Ighrem, Aoulouz) and/or prepared following a different process (traditional, mechanical, or industrial) were collected and their physico-chemical properties analyzed. Sample acidity was found between 0.14 and 1.40%, unsaponifiable matter between 0.34 and 0.79%, saponification value between 180.0 and 199.6, highest peroxide index was 5.72 meq/kg, refractive index (20 degrees C) between 1.4644 and 1.4705, and UV absorption at 270 nm between 0.228 and 0.605. This study, carried out on randomly selected samples, clearly demonstrates that press extraction does not alter either the chemical composition of argan oil or its physico-chemical characteristics. It also demonstrates that press extraction respects the critical factors reported for traditionally prepared oils and necessary to obtain a beneficial effect on human health (a specific fatty acid balance and high tocopherol and sterol levels). In addition, this study should be useful for the establishment of a national quality standard.

  9. Characterization of Glasses in One Type of Alumina Rich Fly Ash by Chemical Digestion Methods: Implications for Alumina Extraction

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    Lijun Zhao

    2016-01-01

    Full Text Available In recent years, one type of alumina rich fly ash (ARFA with about 50 wt% of alumina has been extensively investigated for alumina extraction in China. Due to the silica in ARFA, alumina extraction would have to generate a huge amount of solid waste. There is a growing interest in the glasses in ARFA, because they are composed mainly of silica and could be removed prior to alumina extraction. In this work, the glasses in ARFA have been investigated by chemical methods, that is, acid and base digestions. The chemical compositions have been measured by XRF for ARFA from the digestion processes. The K2O standard, XRD, and FTIR spectroscopies were successfully used to define the digestions processes, and size analysis and SEM-EDX provided rich information on particle transformations. As a result, acid and base digestion methods were found to produce very similar results for the glasses in ARFA. The K2O standard was attributed to the formation of glasses by illites, and TiO2 and Fe2O3 were proposed to originate from ilmenite in alumina rich coals (ARC. Some implications of the results were also discussed for the alumina extraction from ARFA.

  10. EPA Method 525.3 - Determination of Semivolatile Organic Chemicals in Drinking Water by Solid Phase Extraction and Capillary Column Gas Chromatography/Mass Spectrometry (GC/MS)

    Science.gov (United States)

    Method 525.3 is an analytical method that uses solid phase extraction (SPE) and gas chromatography/mass spectrometry (GC/MS) for the identification and quantitation of 125 selected semi-volatile organic chemicals in drinking water.

  11. Effects of Chemical Parameters on Spirulina platensis Biomass Production: Optimized Method for Phycocyanin Extraction

    Directory of Open Access Journals (Sweden)

    B. Vasanthi

    2008-01-01

    Full Text Available The micro alga, Spirulina is a rich source of protein, which is used as a protein supplement for humans, chicks and also in aquaculture. Among the cultures, CS-1 registered maximum biomass production and S-20 showed highest biomass production among the local isolates. Optimum temperature of 35C was the best for maximum biomass production of S. platensis cultures. Among the cultures CS-1 culture, put forth maximum biomass production at 35C. The biomass production of all S. platensis cultures was maximum at pH 10.0. Among the cultures, CS-1 recorded maximum biomass at pH 10.0. S. platensis culture S-20 showed highest biomass production among the local isolates. S. platensis cultures were grown under different light wave lengths ranging from 340-700 nm and observed that it grows best in red light but later on there was no significant difference between the biomass produced under red and normal white lights. S. platensis culture CS-1 has shown the highest chlorophyll, carotenoids and phycocyanin and protein contents. When the extracted protein was resolved on a 15% SDS-PAGE gel, the cultures have polypeptide subunits ranging from the molecular weights 20 to 95 kDa. The liquid nitrogen method was found to be the best by extraction higher quantity of phycocyanin from all S. platensis cultures. Among the cultures, S. platensis culture CS-1 recorded the highest phycocyanin content and among the local isolates SM-2 showed the highest pigment content. SDS-PAGE analysis of phycocyanin pigment revealed two characteristic bands with a molecular weights of 14.3 and 20.1 kDa approximately for a and subunits.

  12. Sequential Extraction of Aluminum and Iron from Acidic Soils by Chemical Selective Dissolution Methods

    Institute of Scientific and Technical Information of China (English)

    HEJIZHENG; A.VIOLANTE; 等

    1998-01-01

    Potassium chloride, Na-pyrophosphate,CuCl2,NH4-oxalate,dithionit-citrate-bicarbonate(DCB) and Na-citrate solutions were employed to etract aluminum(Al) and iron(Fe) sequentially and separately from 15 acidic soils located at the Mangshan Mountains,Hunan Province,China,Many evidences showed that separate pyrophosphate extracted mainly KCl-extractable Al,organo-Al complexes and some inorganic Al compounds,whereas separate CuCl2 extracted KCl-extractable Al and some organo-Al complexes,CuCl2 extracted much less amounts of Al than pyrophosphate did from the soils .Separate oxalate did not extract all KCl-pyrophosphate-CuCl2-oxalate seuentially extractable Al and Fe ,Also,separate DCB did not extract all KCl-pyrophosphate-CuCl2-oxalate-DCB sequentially extractable Al. The forms of Al extacted by oxalate and DCB from the soils were majorly noncrystalline.The interlayered materials of 1.4-nm intergrade minerals of the soils were attributed mainly to hydroxy Al polymers.

  13. Extraction of structural and chemical information from high angle annular dark-field image by an improved peaks finding method.

    Science.gov (United States)

    Yin, Wenhao; Huang, Rong; Qi, Ruijuan; Duan, Chungang

    2016-09-01

    With the development of spherical aberration (Cs) corrected scanning transmission electron microscopy (STEM), high angle annular dark filed (HAADF) imaging technique has been widely applied in the microstructure characterization of various advanced materials with atomic resolution. However, current qualitative interpretation of the HAADF image is not enough to extract all the useful information. Here a modified peaks finding method was proposed to quantify the HAADF-STEM image to extract structural and chemical information. Firstly, an automatic segmentation technique including numerical filters and watershed algorithm was used to define the sub-areas for each atomic column. Then a 2D Gaussian fitting was carried out to determine the atomic column positions precisely, which provides the geometric information at the unit-cell scale. Furthermore, a self-adaptive integration based on the column position and the covariance of statistical Gaussian distribution were performed. The integrated intensities show very high sensitivity on the mean atomic number with improved signal-to-noise (S/N) ratio. Consequently, the polarization map and strain distributions were rebuilt from a HAADF-STEM image of the rhombohedral and tetragonal BiFeO3 interface and a MnO2 monolayer in LaAlO3 /SrMnO3 /SrTiO3 heterostructure was discerned from its neighbor TiO2 layers. Microsc. Res. Tech. 79:820-826, 2016. © 2016 Wiley Periodicals, Inc.

  14. Cytotoxicity and effect of extraction methods on the chemical composition of essential oils of Moringa oleifera seeds.

    Science.gov (United States)

    Kayode, Rowland Monday Ojo; Afolayan, Anthony Jide

    2015-08-01

    Renewed interest in natural materials as food flavors and preservatives has led to the search for suitable essential oils. Moringa oleifera seed essential oil was extracted by solvent-free microwave and hydrodistillation. This study assessed its chemical constituents. Cytotoxicity of the oils was investigated using hatchability and lethality tests on brine shrimps. A total of 16 and 26 compounds were isolated from the hydrodistillation extraction (HDE) and solvent-free microwave extraction (SME) oils, respectively, which accounted for 97.515% and 97.816% of total identifiable constituents, respectively. At 24 h when the most eggs had hatched, values of the SME (56.7%) and HDE (60.0%) oils were significantly different (P1000 mg/ml recommended as an index for non-toxicity, which gives the oil advantage over some antioxidant, antimicrobial, therapeutic, and preservative chemicals.

  15. Cytotoxicity and effect of extraction methods on the chemical composition of essential oils of Moringa oleifera seeds

    Science.gov (United States)

    Kayode, Rowland Monday Ojo; Afolayan, Anthony Jide

    2015-01-01

    Renewed interest in natural materials as food flavors and preservatives has led to the search for suitable essential oils. Moringa oleifera seed essential oil was extracted by solvent-free microwave and hydrodistillation. This study assessed its chemical constituents. Cytotoxicity of the oils was investigated using hatchability and lethality tests on brine shrimps. A total of 16 and 26 compounds were isolated from the hydrodistillation extraction (HDE) and solvent-free microwave extraction (SME) oils, respectively, which accounted for 97.515% and 97.816% of total identifiable constituents, respectively. At 24 h when the most eggs had hatched, values of the SME (56.7%) and HDE (60.0%) oils were significantly different (P1000 mg/ml recommended as an index for non-toxicity, which gives the oil advantage over some antioxidant, antimicrobial, therapeutic, and preservative chemicals. PMID:26238543

  16. Comparison of two chemical extraction methods for proteins and polysaccharides of Spirogyra fluviatilis in extracellular polymeric substances

    Science.gov (United States)

    Chang, Shuiping; Lee, Yichao

    2017-05-01

    Under natural circumstances, Spirogyra fluviatilis excretes large amounts of extracellular polymeric substances (EPS) and forms a mucilage layer. This study used two algal EPS extraction methods such as NH4OH and formaldehyde-NaOH to compare the extraction yields of EPS and the levels of its primary components of polysaccharides and proteins. The results indicated that the extraction yields of EPS using formaldehyde-NaOH and NH4OH are 8.05 mg EPS/g-fresh algae and 5.26 mg EPS/g-fresh algae, respectively. The ratio of proteins to polysaccharides in EPS is around 0.24 to 0.34, which is not a significant difference between the two extraction methods. In other words, the level of polysaccharides is always higher than the level of proteins in EPS extraction with both two methods

  17. Chemical composition of essential oil by different extraction methods and fatty acid analysis of the leaves of Stevia Rebaudiana Bertoni

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    A.B. Siddique

    2016-11-01

    Full Text Available The chemical composition of essential oils of Stevia Rebaudiana Bertoni leaves grown in Bangladesh Sugarcane Research Institute, Pabna, Bangladesh and obtained by two different extraction methods (hydro distillation and steam distillation were determined by gas chromatography–mass spectroscopy analyses (GC–MS. One hundred and twenty three peaks were obtained from hydro distillation where 62 compounds were identified as major compounds such as α-cadinol (2.98%, caryophyllene oxide (1.23%, (−-spathulenol (2.21% and β-guaiene (0.32%, and 50 peaks were obtained from the steam distillation where all the major compounds were present. After approximately 115 days the latter again ran the samples where only 4 peaks were identified of which none of these were constituents of essential oil in Stevia Rebaudiana Bertoni. The fatty acid analysis by GLC showed palmitic acid (86.50% as the most abundant fatty acid in the leaves of Stevia Rebaudiana Bertoni.

  18. Method of infusion extraction

    Science.gov (United States)

    Chang-Diaz, Franklin R. (Inventor)

    1989-01-01

    Apparatus and method of removing desirable constituents from an infusible material by infusion extraction, where a piston operating in a first chamber draws a solvent into the first chamber where it may be heated, and then moves the heated solvent into a second chamber containing the infusible material, and where infusion extraction takes place. The piston then moves the solvent containing the extract through a filter into the first chamber, leaving the extraction residue in the second chamber.

  19. Observations on the Inactivation Efficacy of a MALDI-TOF MS Chemical Extraction Method on Bacillus anthracis Vegetative Cells and Spores.

    Science.gov (United States)

    Weller, Simon A; Stokes, Margaret G M; Lukaszewski, Roman A

    2015-01-01

    A chemical (ethanol; formic acid; acetonitrile) protein extraction method for the preparation of bacterial samples for matrix assisted laser desorption ionisation time-of-flight mass spectrometry (MALDI-TOF MS) identification was evaluated for its ability to inactivate bacterial species. Initial viability tests (with and without double filtration of the extract through 0.2 μM filters), indicated that the method could inactivate Escherichia coli MRE 162 and Klebsiella pneumoniae ATCC 35657, with or without filtration, but that filtration was required to exclude viable, avirulent, Bacillus anthracis UM23CL2 from extracts. Multiple, high stringency, viability experiments were then carried out on entire filtered extracts prepared from virulent B. anthracis Vollum vegetative cells and spores ranging in concentration from 10(6)-10(8) cfu per extract. B. anthracis was recovered in 3/18 vegetative cell extracts and 10/18 spore extracts. From vegetative cell extracts B. anthracis was only recovered from extracts that had undergone prolonged Luria (L)-broth (7 day) and L-agar plate (a further 7 days) incubations. We hypothesise that the recovery of B. anthracis in vegetative cell extracts is due to the escape of individual sub-lethally injured cells. We discuss our results in view of working practises in clinical laboratories and in the context of recent inadvertent releases of viable B. anthracis.

  20. Observations on the Inactivation Efficacy of a MALDI-TOF MS Chemical Extraction Method on Bacillus anthracis Vegetative Cells and Spores.

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    Simon A Weller

    Full Text Available A chemical (ethanol; formic acid; acetonitrile protein extraction method for the preparation of bacterial samples for matrix assisted laser desorption ionisation time-of-flight mass spectrometry (MALDI-TOF MS identification was evaluated for its ability to inactivate bacterial species. Initial viability tests (with and without double filtration of the extract through 0.2 μM filters, indicated that the method could inactivate Escherichia coli MRE 162 and Klebsiella pneumoniae ATCC 35657, with or without filtration, but that filtration was required to exclude viable, avirulent, Bacillus anthracis UM23CL2 from extracts. Multiple, high stringency, viability experiments were then carried out on entire filtered extracts prepared from virulent B. anthracis Vollum vegetative cells and spores ranging in concentration from 10(6-10(8 cfu per extract. B. anthracis was recovered in 3/18 vegetative cell extracts and 10/18 spore extracts. From vegetative cell extracts B. anthracis was only recovered from extracts that had undergone prolonged Luria (L-broth (7 day and L-agar plate (a further 7 days incubations. We hypothesise that the recovery of B. anthracis in vegetative cell extracts is due to the escape of individual sub-lethally injured cells. We discuss our results in view of working practises in clinical laboratories and in the context of recent inadvertent releases of viable B. anthracis.

  1. Painful Bile Extraction Methods

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    It was only in the past 20 years that countries in Asia began to search for an alternative to protect moon bears from being killed for their bile and other body parts. In the early 1980s, a new method of extracting bile from living bears was developed in North Korea. In 1983, Chinese scientists imported this technique from North Korea. According to the Animals Asia Foundation, the most original method of bile extraction is to embed a latex catheter, a narrow rubber

  2. Effect of different extraction methods on fatty acids, volatile compounds, and physical and chemical properties of avocado (Persea americana Mill.) oil.

    Science.gov (United States)

    Moreno, Alicia Ortiz; Dorantes, Lidia; Galíndez, Juvencio; Guzmán, Rosa I

    2003-04-09

    Because Mexico is the number one producer of avocados in the world, this fruit has potential as a source for oil extraction. It is appropriate to further investigate the detailed changes that the oil undergoes when different extraction methods are applied. This research paper presents the study of the physical and chemical changes, the fatty acids profile, the trans fatty acid content, and the identification of volatile compounds of the oils from avocado pulp (Persea americana Mill.), obtained by four different extraction methods. The method with the greatest extraction yield was the combined microwave-hexane method. The amount of trans fatty acids produced in the microwave-squeezing treatment was <0.5 g/100 g. On the other hand, the amounts of trans fatty acids produced with the hexane and acetone treatments were 0.52 and 0.87 g/100 g, respectively. The method that caused the slightest modification to the oil quality was a novel combined extraction method of microwave-squeezing proposed by the authors.

  3. Extractive spectrophotometric method for the determination of ...

    African Journals Online (AJOL)

    Extractive spectrophotometric method for the determination of carbaryl in environmental samples. ... Bulletin of the Chemical Society of Ethiopia ... method has been developed for its determination in environmental samples viz. soil, water and ...

  4. Evaluation of chemical composition, antioxidant, antibacterial, cytotoxic and apoptotic effects of Aloysia citrodora extract on colon cancer cell line using Real Time PCR and Flow-cytometry methods

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    Amir Mirzaie

    2016-06-01

    Full Text Available Background and aims: Aloysia citrodora belongs to the Verbenaceae family of plants, a well-known herbal medicine in Iran. The aim of the present study was to investigate the chemical composition, antioxidant, antibacterial, cytotoxic and apoptotic effect of A. citrodora extract against human colon cancer using real time PCR and flow cytometry methods. Materials and Methods: this experimental study was carried out in Islamic Azad University, East Tehran Branch, from March to September of 2014. At first, the A. citrodora chemical constituents were analyzed by GC/MS technique. In addition, antioxidant assay, antibacterial and anti-cancer effect was performed using DPPH, disk diffusion and MTT methods, respectively. Finally, the apoptosis gene (Bax and Bcl2 expression was performed by real time PCR and apoptotic effects was analyzed using Flow-cytometry technique. Results:  GC/MS analysis of A. citrodora extract was shown 37 major components and the most frequent component was belonged to Spathulenol (17.57% and Caryophyllene oxide (15.15%. The antioxidant activity of the extract was IC50=0.6 ±0.03. The maximum and minimum antibacterial effects of extract were belonged to Gram negative and Gram positive bacteria, respectively. Cytotoxic results revealed that the extract have IC50= 20.1± 0.78 mg/ml against colon cell line and Real Time PCR results showed the expression level of Bax and Bcl2 was increased and decreased respectively in colon cancer cell line (3.470 ± 0.72 (P<0.05, 0.43 ± 0.35 (P< 0.05. In addition, the flow-cytometry results indicated the 38.66 % apoptosis in colon cancer cell line. Conclusion: According to the results, it seems that A. citrodora extract has potential uses for pharmaceutical industries and it suggested that further studies were performed for A. citrodora pharmaceutical importance.

  5. Chemical and physiological metal bioaccessibility assessment in surface bottom sediments from the Deba River urban catchment: Harmonization of PBET, TCLP and BCR sequential extraction methods.

    Science.gov (United States)

    Unda-Calvo, Jessica; Martínez-Santos, Miren; Ruiz-Romera, Estilita

    2017-04-01

    In the present study, the physiologically based extraction test PBET (gastric and intestinal phases) and two chemical based extraction methods, the toxicity characteristic leaching procedure (TCLP) and the sequential extraction procedure BCR 701 (Community Bureau of Reference of the European Commission) have been used to estimate and evaluate the bioaccessibility of metals (Fe, Mn, Zn, Cu, Ni, Cr and Pb) in sediments from the Deba River urban catchment. The statistical analysis of data and comparison among physiological and chemical methods have highlighted the relevance of simulate the gastrointestinal tract environment since metal bioaccessibility seems to depend on water and sediment properties such as pH, redox potential and organic matter content, and, primordially, on the form in which metals are present in the sediment. Indeed, metals distributed among all fractions (Mn, Ni, Zn) were the most bioaccessible, followed by those predominantly bound to oxidizable fraction (Cu, Cr and Pb), especially near major urban areas. Finally, a toxicological risk assessment was also performed by determining the hazard quotient (HQ), which demonstrated that, although sediments from mid- and downstream sampling points presented the highest metal bioaccessibilities, were not enough to have adverse effects on human health, Cr being the most potentially toxic element. Copyright © 2017 Elsevier Inc. All rights reserved.

  6. Extraction Methods, Variability Encountered in

    NARCIS (Netherlands)

    Bodelier, P.L.E.; Nelson, K.E.

    2014-01-01

    Synonyms Bias in DNA extractions methods; Variation in DNA extraction methods Definition The variability in extraction methods is defined as differences in quality and quantity of DNA observed using various extraction protocols, leading to differences in outcome of microbial community composition

  7. Extraction Methods, Variability Encountered in

    NARCIS (Netherlands)

    Bodelier, P.L.E.; Nelson, K.E.

    2014-01-01

    Synonyms Bias in DNA extractions methods; Variation in DNA extraction methods Definition The variability in extraction methods is defined as differences in quality and quantity of DNA observed using various extraction protocols, leading to differences in outcome of microbial community composition as

  8. Chemical composition and biological activity of the plum seed extract

    OpenAIRE

    Savić, Ivan M.; Nikolić, Vesna D.; Savić-Gajić, Ivana M.; Kundaković, Tatjana D.; Stanojković, Tatjana P.; Najman, Stevo J.; id_orcid 0000-0002-2411-9802

    2016-01-01

    The aim of this paper was to estimate the biological activity of the plum seed extract and to define the chemical composition by using the ESI-MS method. During the investigation of the antioxidant activity, the extract showed a better ability to inhibit DPPH radicals compared with amygdalin standard. The results of the antimicrobial study indicate that the extract has a greater effect on Gram-negative bacteria compared with amygdalin. Gram-positive bacteria and fungi remained resistant in bo...

  9. Information Extraction From Chemical Patents

    Directory of Open Access Journals (Sweden)

    Sandra Bergmann

    2012-01-01

    Full Text Available The development of new chemicals or pharmaceuticals is preceded by an indepth analysis of published patents in this field. This information retrieval is a costly and time inefficient step when done by a human reader, yet it is mandatory for potential success of an investment. The goal of the research project UIMA-HPC is to automate and hence speed-up the process of knowledge mining about patents. Multi-threaded analysis engines, developed according to UIMA (Unstructured Information Management Architecture standards, process texts and images in thousands of documents in parallel. UNICORE (UNiform Interface to COmputing Resources workflow control structures make it possible to dynamically allocate resources for every given task to gain best cpu-time/realtime ratios in an HPC environment.

  10. An Extended Keyword Extraction Method

    Science.gov (United States)

    Hong, Bao; Zhen, Deng

    Among numerous Chinese keyword extraction methods, Chinese characteristics were shortly considered. This phenomenon going against the precision enhancement of the Chinese keyword extraction. An extended term frequency based method(Extended TF) is proposed in this paper which combined Chinese linguistic characteristics with basic TF method. Unary, binary and ternary grammars for the candidate keyword extraction as well as other linguistic features were all taken into account. The method establishes classification model using support vector machine. Tests show that the proposed extraction method improved key words precision and recall rate significantly. We applied the key words extracted by the extended TF method into the text file classification. Results show that the key words extracted by the proposed method contributed greatly to raising the precision of text file classification.

  11. Chemical and pharmacological evaluation of Hypericum perforatum extracts

    Institute of Scientific and Technical Information of China (English)

    B Duff SLOLEY; Liana J URICHUK; LING Lei; GU Lie-Dong; Ronald T COUTrSa; Peter K T PANG; Jacqueline J SHAN

    2000-01-01

    AIM: To determine the concentrations of chemical characteristic to extracts of leaves and flowers of Hypericum perforatum (St John's wort) in a number of selected samples and, following chemical characterization, to investigate the effects of these extracts on several pharmacological properties including effects of the extracts on inhibition of 5-hydroxytryptamine (5-HT) uptake and on antioxidant properties. METHODS: The samples were analyzed for the presence of characteristic chemicals by high performance liquid chromatography (HPLC) directly coupled to ultraviolet wavelength absorbance and positive or negative mode electrospray mass spectrometric detection. The effects of extracts on 5-HT uptake were determined by quantifying 3H-5-HT incorporation into rat hippocampal prisms. Estimates of effects of extracts on fire radical scavenging capacity were made using a dynamic assay based on the ability of compounds to prevent the initiation of a colored reaction produced by the horseradish peroxidase catalyzed formation of hydroxyl free radicals from hydrogen peroxide using 2,2′-azinobis (3-ethylbenzthiazoline-6-sulfonic acid) as the color indicator. RESULTS: The chemical profile of a number of extracts were determined and found to differ substantially from each other. Inhibition of 5-HT uptake was found to correlate with hyperforin content and free radical scavenging capacity was found to correlate with the content of several flavonoids including quercetin and hyperoside.CONCLUSION: Standardized extracts of H perforatum varied substantially in the concentration of several characteristic chemicals. The correlation between pharmacological activity and certain characteristic chemicals found in these extracts indicates that the medicinal benefit derived from selected extracts will vary considerably depending on their chemical composition.

  12. 化学法提取香蕉皮中水不溶性膳食纤维%Extract Insoluble Dietary Fiber from Banana Peel with Chemical Method

    Institute of Scientific and Technical Information of China (English)

    张锋

    2012-01-01

    以香蕉皮为原料,利用化学方法提取香蕉皮中水不溶性膳食纤维.通过对试剂浓度、料液比、温度、时间影响因素的研究,找到最佳提取条件.正交实验及验证实验结果表明:水不溶性膳食纤维的最佳工艺条件为氢氧化钠浓度为5%,料液比为15,水浴温度为75℃,水浴时间为50min.香蕉皮中水不溶性膳食纤维得率为55.71%,产品呈淡黄色,无其他异味,颗粒细小.%Taking banana peel as raw material, we extract insoluble dietary fiber from banana peel with chemical method. The best extracting condition is found through study on influencing factors such as solvent concentration, solid-liquid ratio, temperature and time. The result of or- thogonal and verification experiment shows that the optimum conditions are that the concentration of so- dium hydroxide is 5%, solid-liquid ratio is 1 to 5, water solution temperature is 75 ℃ and water solu- tion time is 50min. the yield rate of insoluble dietary fiber from banana peel is 55. 71%. the production is light yellow, has no other peculiar smell and the particle is fine.

  13. Evaluation of DNA and RNA extraction methods.

    Science.gov (United States)

    Edwin Shiaw, C S; Shiran, M S; Cheah, Y K; Tan, G C; Sabariah, A R

    2010-06-01

    This study was done to evaluate various DNA and RNA extractions from archival FFPE tissues. A total of 30 FFPE blocks from the years of 2004 to 2006 were assessed with each modified and adapted method. Extraction protocols evaluated include the modified enzymatic extraction method (Method A), Chelex-100 extraction method (Method B), heat-induced retrieval in alkaline solution extraction method (Methods C and D) and one commercial FFPE DNA Extraction kit (Qiagen, Crawley, UK). For RNA extraction, 2 extraction protocols were evaluated including the enzymatic extraction method (Method 1), and Chelex-100 RNA extraction method (Method 2). Results show that the modified enzymatic extraction method (Method A) is an efficient DNA extraction protocol, while for RNA extraction, the enzymatic method (Method 1) and the Chelex-100 RNA extraction method (Method 2) are equally efficient RNA extraction protocols.

  14. [Investigation of chemical composition of propolis extract].

    Science.gov (United States)

    Majiene, Daiva; Trumbeckaite, Sonata; Grūnoviene, Danguole; Ivanauskas, Liudas; Gendrolis, Antanas

    2004-01-01

    Propolis is a natural product, produced by bees and containing exudates from plants, mixed with bee wax. Propolis and its ethanolic extract are usually used for treatment and prevention of different diseases. Propolis has antibacterial, antiviral, antifungal, anti-inflammatory, anesthetic and immunomodulating properties. Till now there is no data about chemical composition of Lithuanian propolis. Thus, the aim of our work was to investigate the chemical composition of Lithuanian propolis and its ethanolic extract by using gas chromatography / mass spectrometry. We found, that the main structural types of compounds were terpenoids, aromatic and aliphatic acid esters. The most of terpenoids were mono- and sesquiterpens: azulene, alpha-bisabolol, citral, valerenol, etc. Thus, our data show, that the composition of propolis is various and depends on the origin of plants, from where propolis was collected.

  15. Chemical Component and Activity Analysis of Litsea cubeba Extracts Obtained by Different Extraction Methods%不同提取方法山苍子油的化学成分与抗氧化活性分析

    Institute of Scientific and Technical Information of China (English)

    李芳; Yaru Song; Howard Holness; Kevin O’Shea

    2015-01-01

    山苍子油富含萜烯化合物却显示较低的抗氧化活性(64.95 mg·mL -1 ),色谱级的柠檬醛抗氧化活性最低(74.33 mg·mL -1),因此推测脂肪酸成分(特别是不饱和脂肪酸)是山苍子油抗氧化活性的主要物质基础。%Objective]The objective of this study is to evaluate the effect of three common methods on the DPPH radical scavenging activity and the rate of extraction of Litsea cubeba from the dry fruit. GC-MS analysis was carried out to perform the correlation between chemical composition and antioxidant activity of extracts. [Method]The antioxidant extracts of Litsea cubeba were obtained using liquid-liquid extraction ( with ultrasonic assisted or magnetic assisted) ,SFE ( CO2 super-critical fluid extraction) and steam distillation extraction. The antioxidant activities of the extracts were measured by a free radical scavenging method using 1,1-diphenyl-2-picrylhydrazyl (DPPH). The GC-MS analysis of Litsea cubeba extracts were carried out with added 1,4-dibromobenzene which served as an internal standard. Peak area normalization was used to get the relative amount of main compounds in the respective extracts.[Result]Results demonstrate that the oil has significant antioxidant activity. The natural antioxidants are most effectively extracted by employing liquid – liquid extraction. The ultrasonic assisted liquid-liquid extraction exhibiting the highest oil yields of 26. 34%,while magnetic agitation extraction showed highest antioxidant activity of 31. 22 mg·mL -1(IC50). The antioxidant activity of supercritical carbon dioxide extraction is 56. 95 mg·mL -1 . Steam distillation showed lowest antioxidant activity of 64. 95 mg·mL -1 . More than 122 compounds were identified by GC-MS analysis,including 12 kinds of fatty acids,16 kinds of terpenes,18 kinds of oxygenated terpenes,and other trace compounds including alkenes,alcohols,ketones,and alkanes from these extracts. GC-MS results show that the main components of the oil of Litsea cubeba

  16. Wireless Chemical Sensing Method

    Science.gov (United States)

    Woodard, Stanley E. (Inventor); Oglesby, Donald M. (Inventor); Taylor, Bryant D. (Inventor)

    2017-01-01

    A wireless chemical sensor includes an electrical conductor and a material separated therefrom by an electric insulator. The electrical conductor is an unconnected open-circuit shaped for storage of an electric field and a magnetic field. In the presence of a time-varying magnetic field, the first electrical conductor resonates to generate harmonic electric and magnetic field responses. The material is positioned at a location lying within at least one of the electric and magnetic field responses so-generated. The material changes in electrical conductivity in the presence of a chemical-of-interest.

  17. 3种方法提取的玉米胚芽油理化性能差异研究%Research on the Difference in Physical and Chemical Property of Corn Germ Oil Extracted with Three Methods

    Institute of Scientific and Technical Information of China (English)

    连小燕; 钟振声

    2011-01-01

    [目的]研究不同方法提取的玉米胚芽油理化性能差异.[方法]采用索氏抽提法、超声波辅助提取法、水酶法3种方法提取玉米胚芽油,并优化提取条件.分别对3种方法提取的胚芽油的理化性质(折光率、过氧化值、酸价、皂化值、碘价)、磷脂和游离脂肪酸含量、脂肪酸组成、不皂化物的含量及组成进行测定.[结果]索氏抽提法、超声波辅助提取法对胚芽油的提取率均超过49%,水酶法低于25%,但3种方法各有其优点.3种方法所得胚芽油脂肪酸组成基本相同,主要为亚油酸和油酸;不皂化物组成也基本相同,主要为甾醇类及酯类物质,但在数量上存在差异.[结论]从胚芽油的提取率、理化性质及营养价值方面综合评价,超声波辅助提取法最适合玉米胚芽油的提取.%[Objective] The extraction methods resulting in the difference in the physical and chemical property of com germ oil was studied. [Method] Three methods of Soxhlet, ultrasonic-assisted, aqueous enzymatic extraction were used in the extraction of corn germ oil and the condition was optimized. The physical and chemical property ( refractive index, peroxide value, acid value, saponification value, iodine value ) , the content of phospholipids and free fatty acid, the composition of fatty acid and the content and composition of unsaponifiable matter of the corn germ oil extracted with the three methods were determined. [ Result] The extraction rate of corn germ oil was more than 49% in Soxhlet and ultrasonic-assisted extraction method and less than 25% in aqueous enzymatic extraction method, but the three methods showed unique advantage, respectively. [ Conclusion ] Based on the comprehensive assessment in the extraction rate, the physical and chemical property and nutritional value of the corn germ oil, the method of ultrasonic assisted extraction was most suitable for its extraction.

  18. Chemical composition of lipophilic extractives from grey alder (Alnus incana

    Directory of Open Access Journals (Sweden)

    Oskars Bikovens

    2013-02-01

    Full Text Available The chemical composition of the lipophilic extractives in the hexane extracts from grey alder bark, knotwood, and cones has been investigated by gas chromatography and gas chromatography-mass spectrometry. The efficiency of two extraction methods was compared. The highest amount of lipophilic extractives (about 9% of o.d. material was observed in grey alder cone, while the lowest (about 3% was found in knotwood. The three different morphological parts of alder showed significant differences not only in the content but also in composition of extractives, namely fatty acids, triglycerides, and triterpenes. The main identified compounds were triterpenoids (lupen-3-one, lupeol, betulone, betulinol, and betulinic acid in bark, and triglycerides in cones. The major group in knotwood was free fatty acids (mainly linoleic acid, 18:2.

  19. Antibacterial and antioxidant activities and chemical compositions of volatile oils extracted from Schisandra chinensis Baill. seeds using simultaneous distillation extraction method, and comparison with Soxhlet and microwave-assisted extraction.

    Science.gov (United States)

    Teng, Hui; Lee, Won Y

    2014-01-01

    The volatile oils were isolated from dried Schisandra chinensis Baill. seeds by Soxhlet extraction (SE), microwave-assisted extraction (MAE), and simultaneous distillation extraction (SDE), and fractions were identified by gas chromatography-mass spectrometry (GC-MS) and high-performance liquid chromatography (HPLC). The essential oils were assessed for their antioxidant and antibacterial activities. GC-MS results also revealed that the major ingredients in the oil extracted by SDE were terpenoids compounds such as ylangene (15.01%), α-phellandrene (8.23%), β-himachalene (6.95%), and cuparene (6.74), and the oil extracts of MAE and SE mainly contained aromatics such as schizandrins, wuweizisu C, and gomisin A. HPLC analysis results confirmed that more schizandrin was obtained through extraction by MAE (996.64 μg/g) and SE (722.13 μg/g). SDE oil extract showed more significant antioxidant activity than MAE or SE oil. Only volatile oil from SDE showed good antibacterial activity against all tested strains.

  20. A rapid and sensitive UHPLC-FT-ICR MS/MS method for identification of chemical constituents in Rhodiola crenulata extract, rat plasma and rat brain after oral administration.

    Science.gov (United States)

    Han, Fei; Li, Yanting; Ma, Li; Liu, Tianfeng; Wu, Yawen; Xu, Rui; Song, Aihua; Yin, Ran

    2016-11-01

    A rapid and sensitive UHPLC-FT-ICR MS/MS method was developed for the first time to analyze the extract of Rhodiola crenulata and the constituents absorbed into rat blood and brain after oral administration. Under the optimized conditions, a total of 64 chemical constituents were identified or tentatively characterized in vitro in 30min, and also 24 and 9 chemical constituents were detected in rat plasma and brain respectively, by comparing the retention time, accurate mass and/or MS/MS data of blank and dosed sample. The results indicated that the developed UHPLC-FT-ICR MS/MS method was suitable for detection and identifying the chemical constituents in Rhodiola crenulata extract, rat plasma and rat brain, and it could be used as a powerful and reliable analytical strategy for rapid identification of chemical constituents in vitro and in vivo for other traditional Chinese herbal medicines (TCMs). Furthermore, the detected chemical constituents in rat brain could be speculated to be the pharmacodynamic substances of Rhodiola crenulata for Alzheimer's disease (AD) and it could also provide useful chemical information for further mass spectrometry imaging and bioactive substances research on Rhodiola crenulata.

  1. EXTRACTIVE SPECTROPHOTOMETRIC METHOD FOR THE ...

    African Journals Online (AJOL)

    B. S. Chandravanshi

    ketone (MIBK) extractable yellow nickel(II)-methyldithiocarbamate complex at 380 nm through ... The method has been applied to the analysis of carbaryl in its ...... Farahani, G.H.N.; Zakaria, Z.; Kuntom, A.; Omar, D.; Ismail, B.S. Adv. Environ.

  2. [Chemical hazards arising from shale gas extraction].

    Science.gov (United States)

    Pakulska, Daria

    2015-01-01

    The development of the shale industry is gaining momentum and hence the analysis of chemical hazards to the environment and health of the local population is extreiely timely and important. Chemical hazards are created during the exploitation of all minerals, but in the case of shale gas production, there is much more uncertainty as regards to the effects of new technologies application. American experience suggests the increasing risk of environmental contamination, mainly groundwater. The greatest, concern is the incomplete knowledge of the composition of fluids used for fracturing shale rock and unpredictability of long-term effects of hydraulic fracturing for the environment and health of residents. High population density in the old continent causes the problem of chemical hazards which is much larger than in the USA. Despite the growing public discontent data on this subject are limited. First of all, there is no epidemiological studies to assess the relationship between risk factors, such as air and water pollution, and health effects in populations living in close proximity to gas wells. The aim of this article is to identify and discuss existing concepts on the sources of environmental contamination, an indication of the environment elements under pressure and potential health risks arising from shale gas extraction.

  3. Chemical hazards arising from shale gas extraction

    Directory of Open Access Journals (Sweden)

    Daria Pakulska

    2015-02-01

    Full Text Available The development of the shale industry is gaining momentum and hence the analysis of chemical hazards to the environment and health of the local population is extremely timely and important. Chemical hazards are created during the exploitation of all minerals, but in the case of shale gas production, there is much more uncertainty as regards to the effects of new technologies application. American experience suggests the increasing risk of environmental contamination, mainly groundwater. The greatest concern is the incomplete knowledge of the composition of fluids used for fracturing shale rock and unpredictability of long-term effects of hydraulic fracturing for the environment and health of residents. High population density in the old continent causes the problem of chemical hazards which is much larger than in the USA. Despite the growing public discontent data on this subject are limited. First of all, there is no epidemiological studies to assess the relationship between risk factors, such as air and water pollution, and health effects in populations living in close proximity to gas wells. The aim of this article is to identify and discuss existing concepts on the sources of environmental contamination, an indication of the environment elements under pressure and potential health risks arising from shale gas extraction. Med Pr 2015;66(1:99–117

  4. Apparatus and methods for hydrocarbon extraction

    Science.gov (United States)

    Bohnert, George W.; Verhulst, Galen G.

    2016-04-26

    Systems and methods for hydrocarbon extraction from hydrocarbon-containing material. Such systems and methods relate to extracting hydrocarbon from hydrocarbon-containing material employing a non-aqueous extractant. Additionally, such systems and methods relate to recovering and reusing non-aqueous extractant employed for extracting hydrocarbon from hydrocarbon-containing material.

  5. Semiclassical Methods in Chemical Physics.

    Science.gov (United States)

    Miller, William H.

    1986-01-01

    Discusses the role of semiclassical theory in chemical physics both as a computational method and conceptual framework for interpreting quantum mechanical experiments and calculations. Topics covered include energy wells and eigenvalues, scattering, statistical mechanics and electronically nonadiabiatic processes. (JM)

  6. Effects of solvent-free microwave extraction on the chemical composition of essential oil of Calamintha nepeta (L.) Savi compared with the conventional production method.

    Science.gov (United States)

    Riela, Serena; Bruno, Maurizio; Formisano, Carmen; Rigano, Daniela; Rosselli, Sergio; Saladino, Maria Luisa; Senatore, Felice

    2008-04-01

    The essential oil of Calamintha nepeta has been obtained by solvent-free microwave extraction (SFME) and by classical hydrodistillation (HD). A comparative qualitative-quantitative study on the composition of the oils was carried out. A total of 38 compounds, constituting 97.6% of the oil, were identified in the oil obtained by SFME, whereas 46 compounds, representing 95.4% of the oil, were characterized in the HD oil. SFME-distilled oil is richer in lightly oxygenated monoterpenes (LOM) than HD oil. It also has a higher amount of sesquiterpenes and a lower quantity of hydrocarbon monoterpenes. HD oil seems to be affected by chemical changes more than SFME oil.

  7. [Chemical constituents from supercritical CO2 extraction of Schisandra chinensis].

    Science.gov (United States)

    Zhu, Hong-yan; Lin, Hai-cheng; Wang, Guo-li; Zhang, Lian-xue

    2014-11-01

    To study the chemical constituents from the supercritical CO2 extraction of Schisandra chinensis. The compounds were separated and purified by conventional column chromatography and their structures were identified by spectroscopic methods. Nine compounds were isolated from the supercritical CO2 extraction of Schisandra chinensis, and their structures were identified as chrysophanol(1),schisandrin B(2), β-sitosterol(3), schisandrin C(4),schisandrol A(5), angeloylgomisin H(6), daucosterol(7) 1, 5-dimethyl citrate (8), and shikimic acid (9). Compounds 1, 8 and 9 are isolated from Schisandra chinensis for the first time,and compound 1 as an anthraquinone is isolated from this genus for the first time.

  8. Chemical control methods and tools

    Science.gov (United States)

    Steven Manning; James. Miller

    2011-01-01

    After determining the best course of action for control of an invasive plant population, it is important to understand the variety of methods available to the integrated pest management professional. A variety of methods are now widely used in managing invasive plants in natural areas, including chemical, mechanical, and cultural control methods. Once the preferred...

  9. The Effects of Different Extraction Methods on Antioxidant Properties, Chemical Composition, and Thermal Behavior of Black Seed (Nigella sativa L.) Oil

    Science.gov (United States)

    Mohammed, Nameer Khairullah; Abd Manap, Mohd Yazid; Muhialdin, Belal J.; Alhelli, Amaal M.

    2016-01-01

    The Nigella sativa L. popularly referred to as black seeds are widely used as a form of traditional nutrition and medicine. N. sativa seeds were used for the extraction of their oil by way of supercritical fluid extraction (SFE) and cold press (CP) to determine the physicochemical properties, antioxidant activity, and thermal behavior. The GC-MS results showed the primary constituents in the Nigella sativa oil (NSO) were Caryophyllene (17.47%) followed by thymoquinone (TQ) (11.80%), 1,4-Cyclohexadiene (7.17%), longifolene (3.5%), and carvacrol (1.82%). The concentration of TQ was found to be 6.63 mg/mL for oil extracted using SFE and 1.56 mg/mL for oil extracted by CP method. The antioxidant activity measured by DPPH and the IC50 was 1.58 mg/mL and 2.30 mg/mL for SFE oil and cold pressed oil, respectively. The ferric reducing/antioxidant power (FRAP) activity for SFE oil and CP oil was 538.67 mmol/100 mL and 329.00 mmol/100 mL, respectively. The total phenolic content (TPC) of SFE oil was 160.51 mg/100 mL and 94.40 mg/100 mL for CP oil presented as gallic acid equivalents (GAE). This research showed that a high level of natural antioxidants could be derived from NSO extracted by SFE. PMID:27642353

  10. The Effects of Different Extraction Methods on Antioxidant Properties, Chemical Composition, and Thermal Behavior of Black Seed (Nigella sativa L. Oil

    Directory of Open Access Journals (Sweden)

    Nameer Khairullah Mohammed

    2016-01-01

    Full Text Available The Nigella sativa L. popularly referred to as black seeds are widely used as a form of traditional nutrition and medicine. N. sativa seeds were used for the extraction of their oil by way of supercritical fluid extraction (SFE and cold press (CP to determine the physicochemical properties, antioxidant activity, and thermal behavior. The GC-MS results showed the primary constituents in the Nigella sativa oil (NSO were Caryophyllene (17.47% followed by thymoquinone (TQ (11.80%, 1,4-Cyclohexadiene (7.17%, longifolene (3.5%, and carvacrol (1.82%. The concentration of TQ was found to be 6.63 mg/mL for oil extracted using SFE and 1.56 mg/mL for oil extracted by CP method. The antioxidant activity measured by DPPH and the IC50 was 1.58 mg/mL and 2.30 mg/mL for SFE oil and cold pressed oil, respectively. The ferric reducing/antioxidant power (FRAP activity for SFE oil and CP oil was 538.67 mmol/100 mL and 329.00 mmol/100 mL, respectively. The total phenolic content (TPC of SFE oil was 160.51 mg/100 mL and 94.40 mg/100 mL for CP oil presented as gallic acid equivalents (GAE. This research showed that a high level of natural antioxidants could be derived from NSO extracted by SFE.

  11. Chemical extraction to assess the bioavailability of chlorobenzenes in soil with different aging periods

    Energy Technology Data Exchange (ETDEWEB)

    Song, Yang; Wang, Fang; Yang, Xinglun; Liu, Cuiying; Jin, Xin; Jiang, Xin [Chinese Academy of Sciences, Nanjing (China). State Key Lab. of Soil and Sustainable Agriculture; Kengara, Fredrick Orori [Maseno Univ. (Kenya). Dept. of Chemistry

    2011-12-15

    Bioavailability is mainly influenced by aging and desorption of contaminants in soil. The purpose of this study was to investigate the desorption kinetics of chlorobenzenes (CBs) in soil and to investigate whether chemical extractions are suitable for the bioavailability assessment of CBs in soil. A soil spiked with CBs and aged for different periods was extracted with Tenax, hydroxypropyl-{beta}-cyclodextrin (HPCD), and butanol to assess the bioavailability of CBs in soil, respectively. Earthworm (Eisenia foetida) accumulation was used as bioassay in parallel experiments to evaluate the chemical extractions. The results showed that desorption of CBs from soil with consecutive Tenax extraction fitted into triphasic kinetics model. Different chemical methods extracted different amounts of CBs over different aging periods. For hexachlorobenzene (HCB), the extraction efficiency was in the order of butanol > Tenax-6h > HPCD extraction, while the order of butanol > HPCD > Tenax-6h extraction for pentachlorobenzene (PeCB). The bioaccumulation by earthworm decreased with increasing aging period and was significantly higher for HCB than for PeCB (p < 0.05). Earthworm accumulated CBs correlated well with all the three chemical extracted CBs. However, HPCD extraction showed the converse extraction tendency with earthworm uptake of CBs. Chemical extraction could be used to assess the bioavailability of contaminants in soil; however, they were method and compound specific. Tenax and butanol extractions were more reliable than HPCD extraction for bioavailability assessment of the tested CBs and the soil used since they showed the consistent extraction tendency with earthworm uptake of CBs.

  12. Extraction of extracellular polymeric substances (EPS) from anaerobic granular sludges: comparison of chemical and physical extraction protocols

    OpenAIRE

    2010-01-01

    The characteristics of the extracellular polymeric substances (EPS) extracted with nine different extraction protocols from four different types of anaerobic granular sludge were studied. The efficiency of four physical (sonication, heating, cationic exchange resin (CER), and CER associated with sonication) and four chemical (ethylenediaminetetraacetic acid, ethanol, formaldehyde combined with heating, or NaOH) EPS extraction methods was compared to a control extraction protocols (i.e., centr...

  13. Study on the Chemical Composition of the Essential Oil Extracted from Bupleuri Chinese by Different Methods%不同方法提取的柴胡挥发油化学成分比较

    Institute of Scientific and Technical Information of China (English)

    施铮; 陈仁寿; 陈勇

    2015-01-01

    目的:考察不同提取方法柴胡挥发油中成分的差异。方法采用水蒸气蒸馏法、酸水蒸气蒸馏法、水蒸馏法、酸水蒸馏法及溶剂提取法提取柴胡挥发油,并采用 GC-MS 法分析所得挥发油的成分。结果溶剂提取法的挥发油得油率最高,用酸水处理后再提取的得油率最低;GC-MS 分析结果表明,主要成分为茴香脑及其同分异构体蒿脑,酸水处理后提取的挥发油含有反式-2-壬烯醛、松油醇。结论不同提取方法所得的挥发油成分差异较大,主要成分茴香脑及其同分异构体蒿脑在解热方面的药效需进一步研究。%OBJECTIVE To study the chemical composition of essential oil extracted from Bupleuri Chinese by different methods.METHODS The essential oils were extracted by steam distillation,acid water vapor distillation,water distillation, acid water distillation and solvent extraction methods,and the chemical composition of the essential oils were analyzed by GC-MS.RESULTS The yields of essential oil extracted by solvent extraction method was highest,while the yields with acid water treatment was lowest;GC-MS analysis showed the main chemical composition were anethole and its isomer estragole.CON-CLUSION The chemical composition of the essential oil extracted by different methods is distinct,and further study on the antipyretic effect of the main composition anethole and its isomer estragole is needed.

  14. Chemical microreactor and method thereof

    Science.gov (United States)

    Morse, Jeffrey D.; Jankowski, Alan

    2011-08-09

    A method for forming a chemical microreactor includes forming at least one capillary microchannel in a substrate having at least one inlet and at least one outlet, integrating at least one heater into the chemical microreactor, interfacing the capillary microchannel with a liquid chemical reservoir at the inlet of the capillary microchannel, and interfacing the capillary microchannel with a porous membrane near the outlet of the capillary microchannel, the porous membrane being positioned beyond the outlet of the capillary microchannel, wherein the porous membrane has at least one catalyst material imbedded therein.

  15. CHEMICAL ANALYSIS OF DENSE-GAS EXTRACTS FROM LIME FLOWERS

    Directory of Open Access Journals (Sweden)

    Demyanenko DV

    2015-04-01

    Full Text Available The purpose of this work was to make qualitative and quantitative analysis of phenolic biologically active substances (BAS in the extracts produced from lime flowers with condensed gases, using method of high-performance liquid chromatography (HPLC. Materials and methods: materials for this study were the extracts obtained by consequent processing of the herbal drug and marcs thereof with various condensed gases: difluorochloromethane (Freon R22, difluoromethane (Freon R32, azeotropic mixture of difluoromethane with pentafluoroethane (Freon 410A and freon-ammonium mixture. Extracts obtained with the latter were subjected to further fractionation by liquidliquid separation into hexane, chloroform, ethyl acetate and aqueous-alcohol phases. Besides, the supercritical СО2 extract, obtained from the herbal drug under rather strong conditions (at temperature 60°С and pressure 400 bar, was studied in our previous research. Presence of phenolic BAS and their quantity in the researched samples were determined by method of HPLC with UVspectrometric detection. Results and discussion: It has been found that Freon R22 extracted trace amounts of rutin from lime flowers – its content was only 0.08% of the total extract weight. On the other hand, Freons R32 and R410А showed good selectivity to moderately polar BAS of lime flowers (derivatives of flavonoids and hydroxycinnamic acids: in particular, the extract obtained with freon R32 contained about 1.3% of the total phenolic substances, and it was the only one of the investigated condensed gases used by us which took the basic flavonoid of lime flowers tiliroside – its content was 0.42% of extract weight. Also Freons R32 and R410А were able to withdraw another compound dominating among phenolic substances in the yielded extracts. Its quantity was rather noticeable – up to 0.87% of extract weight. This substance was not identified by existing database, but its UV-spectrum was similar to those of

  16. Carotenoid extraction methods: A review of recent developments.

    Science.gov (United States)

    Saini, Ramesh Kumar; Keum, Young-Soo

    2018-02-01

    The versatile use of carotenoids in feed, food, cosmetic and pharmaceutical industries has emphasized the optimization of extraction methods to obtain the highest recovery. The choice of method for carotenoid extraction from food matrices is crucial, owing to the presence of diverse carotenoids with varied levels of polarity, and the presence of various physical and chemical barriers in the food matrices. This review highlights the theoretical aspects and recent developments of various conventional and nonconventional methods used for the extraction of carotenoids, including ultrasound-assisted extraction (UAE), pressurized liquid extraction (PLE), and supercritical fluid extraction (SFE). Recent applications of non-toxic and environmentally safe solvents (green solvents) and ionic liquids (IL) for carotenoid extraction are also described. Additionally, future research challenges in the context of carotenoids extractions are also identified. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. Virgin almond oil: Extraction methods and composition

    Directory of Open Access Journals (Sweden)

    Roncero, J. M.

    2016-09-01

    Full Text Available In this paper the extraction methods of virgin almond oil and its chemical composition are reviewed. The most common methods for obtaining oil are solvent extraction, extraction with supercritical fluids (CO2 and pressure systems (hydraulic and screw presses. The best industrial performance, but also the worst oil quality is achieved by using solvents. Oils obtained by this method cannot be considered virgin oils as they are obtained by chemical treatments. Supercritical fluid extraction results in higher quality oils but at a very high price. Extraction by pressing becomes the best option to achieve high quality oils at an affordable price. With regards chemical composition, almond oil is characterized by its low content in saturated fatty acids and the predominance of monounsaturated, especially oleic acid. Furthermore, almond oil contains antioxidants and fat-soluble bioactive compounds that make it an oil with interesting nutritional and cosmetic properties.En este trabajo se revisan los métodos de extracción del aceite de almendra virgen y su composición química. Los métodos más habituales para la obtención del aceite son la extracción con disolventes, la extracción con fluidos supercríticos (CO2 y los sistemas de presión (prensas hidráulica y de tornillo. El mayor rendimiento industrial, pero también la peor calidad de los aceites, se consigue mediante el uso de disolventes. Además, los aceites obtenidos por este método no se pueden considerar vírgenes, pues se obtienen por medio de tratamientos químicos. La extracción con fluidos supercríticos da lugar a aceites de mayor calidad pero a un precio muy elevado. La extracción mediante prensado se convierte en la mejor opción de extracción, al conseguir aceites de alta calidad a un precio asequible. En cuanto a su composición química, el aceite de almendra se caracteriza por su bajo contenido en ácidos grasos saturados y el predominio de los monoinsaturados, en

  18. Sono-assisted extraction of alcohol-insoluble extract from Althaea rosea: purification and chemical analysis.

    Science.gov (United States)

    Eskandari, Meghdad; Samavati, Vahid

    2015-01-01

    A Box-Behnken design (BBD) was used to evaluate the effects of ultrasonic power, extraction time, extraction temperature, and water to raw material ratio on extraction yield of alcohol-insoluble polysaccharide of Althaea rosea leaf (ARLP). Purification was carried out by dialysis method. Chemical analysis of ARLP revealed contained 12.69 ± 0.48% moisture, 79.33 ± 0.51% total sugar, 3.82 ± 0.21% protein, 11.25 ± 0.37% uronic acid and 3.77 ± 0.15% ash. The response surface methodology (RSM) showed that the significant quadratic regression equation with high R(2) (=0.9997) was successfully fitted for extraction yield of ARLP as function of independent variables. The overall optimum region was found to be at the combined level of ultrasonic power 91.85 W, extraction time 29.94 min, extraction temperature 89.78 °C, and the ratio of water to raw material 28.77 (mL/g). At this optimum point, extraction yield of ARLP was 19.47 ± 0.41%. No significant (p>0.05) difference was found between the actual and predicted (19.30 ± 0.075%) values. The results demonstrated that ARLP had strong scavenging activities on DPPH and hydroxyl radicals.

  19. Chemical composition and antibacterial activity of Aloysia triphylla (L'Hérit Britton extracts obtained by pressurized CO2 extraction

    Directory of Open Access Journals (Sweden)

    Thaylise Vey Parodi

    2013-04-01

    Full Text Available This study investigated the chemical composition of five different extracts of Aloysia triphylla and their activity against Aeromonas sp. The extracts were obtained from the dried leaves by pressurized CO2 extraction at 30, 50 and 70ºC, and 100, 150, and 200 bar, and analyzed by GC/FID and GC-MS. The antibacterial activity was assayed by the microdilution method. The tested microorganisms comprised seven Aeromonas isolates obtained from the kidney of infected silver catfish, Rhamdia quelen. The yield, chemical composition and antibacterial activity of the extracts were dependent on the extraction conditions. Mono and sesquiterpenoids were the major constituents of all the extracts and the highest extraction yield was obtained at 70ºC and 200 bar. A. triphylla presented moderate antibacterial activity against Aeromonas sp.

  20. Optimisation of a selective method for the determination of organophosphorous triesters in outdoor particulate samples by pressurised liquid extraction and large-volume injection gas chromatography-positive chemical ionisation-tandem mass spectrometry.

    Science.gov (United States)

    Quintana, José Benito; Rodil, Rosario; López-Mahía, Purificación; Muniategui-Lorenzo, Soledad; Prada-Rodríguez, Darío

    2007-07-01

    A selective analytical method for the determination of nine organophosphate triesters and triphenylphosphine oxide (TPPO) in outdoor particulate matter is presented. It involves a fully automated pressurised liquid extraction (PLE) step, integrating an alumina clean-up process, and subsequent determination by large-volume injection gas chromatography-positive chemical ionisation-tandem mass spectrometry (LVI-GC-PCI-MS/MS). The extraction variables (solvent, amount of adsorbent, temperature, time and number of cycles) were optimised using a multicriteria strategy which implements a desirability function that maximises both extraction and clean-up efficiencies while searching for the best-compromise PLE conditions. The final method affords quantification limits of between 0.01 and 0.3 microg g(-1) and recoveries of >80%, with the exceptions of the most polar analytes, TCEP and TPPO (~65%) for both urban dust and PM10 samples. Moreover, the method permitted the levels of these compounds in dust deposited outdoors (between LOD and 0.5 microg g(-1) for TEHP) and PM10 samples (between LOD and 2.4 microg m(-3) for TiBP) to be measured and reported for the first time.

  1. Chemical profiling of Curcuma aeruginosa Roxb. rhizome using different techniques of solvent extraction

    Directory of Open Access Journals (Sweden)

    Sanimah Simoh

    2015-05-01

    Conclusions: It was evident from the results that C. aeruginosa rhizome extracted using two different techniques of solvent extractions (MTBE and M/C contained various chemical classes of compounds including terpenoids, sterols, organic acids, fatty acids and sugars. Different methods of extraction have led to different compounds extraction for C. aeruginosa rhizome. The results also indicated that the plant was a source of phytochemical importance.

  2. [Chemical hazards arising from shale gas extraction].

    OpenAIRE

    Daria Pakulska

    2015-01-01

    The development of the shale industry is gaining momentum and hence the analysis of chemical hazards to the environment and health of the local population is extremely timely and important. Chemical hazards are created during the exploitation of all minerals, but in the case of shale gas production, there is much more uncertainty as regards to the effects of new technologies application. American experience suggests the increasing risk of environmental contamination, mainly groundwater. The g...

  3. Method of forming a chemical composition

    Science.gov (United States)

    Bingham, Dennis N.; Wilding, Bruce M.; Klingler, Kerry M.; Zollinger, William T.; Wendt, Kraig M.

    2007-10-09

    A method of forming a chemical composition such as a chemical hydride is described and which includes the steps of selecting a composition having chemical bonds and which is capable of forming a chemical hydride; providing a source of hydrogen; and exposing the selected composition to an amount of ionizing radiation to encourage the changing of the chemical bonds of the selected composition, and chemically reacting the selected composition with the source of hydrogen to facilitate the formation of a chemical hydride.

  4. Influence of different extraction methods on the chemical composition of grape pomace condensed tannins%不同提取方法对葡萄渣凝缩类单宁化学组成的影响

    Institute of Scientific and Technical Information of China (English)

    兰平; 黄润州; 周定国; BROSSE Nicolas; CHRUSCIEL Laurent

    2015-01-01

    分别采用酸沉淀法和冷冻干燥法从葡萄渣中提取凝缩类单宁,借助碳核磁共振波谱法(13 C-NMR)和基质辅助激光解吸/电离飞行时间质谱法( MALDI-TOF),分析不同的提取方法对凝缩类单宁提取物化学结构和组成的影响。结果表明:这两种单宁提取物以原花青定类凝缩单宁为主,少量的原花青定上含有葡萄糖基取代基和没食子酸取代基,单宁单体间以C4-C8键连接;酸化凝缩类单宁分子聚合度高于冻干凝缩类单宁;同时,酸化凝缩类单宁的中碳水化合物含量低于冻干凝缩类单宁,但儿茶酸含量高于冻干凝缩类单宁。%Condensed tannins were extracted from grape pomace by acid precipitation and lyophilisation, respectively. Influence of the recovery methods on the chemical structure and composition of tannin extracts was investigated by using Carbon Nuclear Magnetic Resonance ( 13 C-NMR ) and Matrix⁃Assisted Laser Desorption/Ionization Time of Flight ( MALDI-TOF) Mass Spectrometry. The results showed that the procyanidin units played a dominait role in two kinds of condensed tannin extracts, and small proportion glucose and gallic acid substitutions bonded in procyanidin units which was linked together by C4-C8 bond. The polymerization degree of acidified condensed tannins was higher than that of ly⁃ophilized condensed tannins. In addition, relatively low carbonhydrate and high catechinc acid content in acidified con⁃densed tannins were observed compared with lyophilized condensed tannins. Different extraction methods had great influ⁃ence on the chemical composition of grape pomace tannin extracts.

  5. Extracting Chemical Reactions from Biological Literature

    Science.gov (United States)

    2014-05-16

    positive example is due to incorrect chemical  recognition. In the sentence, “ lactic   acid ” is a chemical used as an adjective describing the  bacteria  and...d-gluconate False Positive A study of the effects of histamine histidine and growth phase on histamine production by lactic acid bacteria isolated...from wine is reported here. lactic acid => histamine n/a False Negative Human 17 beta-hydroxysteroid dehydrogenase 17-HSD type 1 catalyzes

  6. Chemical profile and antimicrobial activity of Boldo (Peumus boldus Molina) extracts obtained by compressed carbon dioxide extraction

    OpenAIRE

    Mazutti,M.; Mossi,A. J.; CANSIAN,R.L.; Corazza,M. L.; Dariva,C.; Vladimir Oliveira,J.

    2008-01-01

    This work reports the effects of temperature (20 to 50ºC) and pressure (100 to 250 bar) on the extraction yield, chemical characteristics and antimicrobial activity of extracts of Peumus boldus Molina obtained by compressed carbon dioxide extraction. Results showed that the extraction variables affect the extraction yield and the chemical distribution of the major compounds present in the extracts. The extracts were chemically analyzed with regard to 1,8-cineole, trans-sabinene, pinocarveol, ...

  7. Chemical profile and antimicrobial activity of Boldo (Peumus boldus Molina) extracts obtained by compressed carbon dioxide extraction

    OpenAIRE

    Mazutti,M.; A J Mossi; CANSIAN,R.L.; M. L. Corazza; Dariva,C.; J. Vladimir Oliveira

    2008-01-01

    This work reports the effects of temperature (20 to 50ºC) and pressure (100 to 250 bar) on the extraction yield, chemical characteristics and antimicrobial activity of extracts of Peumus boldus Molina obtained by compressed carbon dioxide extraction. Results showed that the extraction variables affect the extraction yield and the chemical distribution of the major compounds present in the extracts. The extracts were chemically analyzed with regard to 1,8-cineole, trans-sabinene, pinocarveol, ...

  8. Tungsten chemical vapor deposition method

    Energy Technology Data Exchange (ETDEWEB)

    Hirano, Kiichi; Takeda, Nobuo.

    1993-07-13

    A tungsten chemical vapor deposition method is described, comprising: a first step of selectively growing a first thin tungsten film of a predetermined thickness in a desired region on the surface of a silicon substrate by reduction of a WF[sub 6] gas introduced into an atmosphere of a predetermined temperature containing said silicon substrate; and a second step of selectively growing a second tungsten film of a predetermined thickness on said first thin tungsten film by reduction of said WF[sub 6] with a silane gas further introduced into said atmosphere, wherein the surface state of said substrate is monitored by a pyrometer and the switching from said first step to said second step is performed when the emissivity of infrared light from the substrate surfaces reaches a predetermined value.

  9. Chemical processing of raw florets of dyer's saffron and successful extraction of a resulting product (carthamin: an approach to improve conventional methods

    Directory of Open Access Journals (Sweden)

    Koshi Saito

    2014-01-01

    Full Text Available Efficacy of KMnO4 on processing red florets of dyer's saffron was examined in the presence of micromolar concentrations of the metal salts. Apparent value for KMnO4 determined by double-reciprocal plots was 126 µM, whose value corresponds to a 1/154-fold of dried florets. Successful extraction of red carthamin was performed by using the processed matters with various solvent systems. HCl/NaOH, acetic acid/ammonia water and pyridine/methanol were found to be effective. For purification of carthamin, the cellulose adsorption technique was very promising. The data are assessed to standarize the new technique.

  10. Solvent-extraction methods applied to the chemical analysis of uranium. III. Study of the extraction with inert solvents; Metodos de extraccion con disolventes aplicados al analisis quimico del uranio. III. Estudio de la extraccion con disolvente inertes

    Energy Technology Data Exchange (ETDEWEB)

    Vera Palomino, J.; Palomares Delgado, F.; Petrement Eguiluz, J. C.

    1964-07-01

    The extraction of uranium on the trace level is studied by using tributylphosphate as active agent under conditions aiming the attainment of quantitative extraction by means of a single step process using a number of salting-out agents and keeping inside the general lines as reported in two precedent papers. Two inert solvents were investigated, benzene and cyclohexane, which allowed to derive the corresponding empirical equations describing the extraction process and the results obtained were compared with those previously reported for solvents which, like ethyl acetate and methylisobuthylketone, favour to a more or less extend the extraction of uranium. (Author) 4 refs.

  11. GC-MS analysis of chemical constituents of the volatile oil from Cinnamomum camphora leaves by different extraction methods%GC-MS分析不同方法提取的樟树叶挥发油成分

    Institute of Scientific and Technical Information of China (English)

    付宇新; 章挺; 江香梅; 罗丽萍; 杨海宽; 郭夏丽; 刘星星; 李桂兰

    2015-01-01

    为确定樟树叶挥发油最佳的提取方法,采用传统水蒸气蒸馏法、微波辅助蒸馏法、超声波辅助蒸馏法和同时蒸馏萃取法提取樟树叶挥发油,并用GC-MS法对其化学成分进行分析比较。实验结果,MAHD挥发油得率为3.1%,略高于SDE的2.8%。4种提取方法所得挥发油共鉴定出79种化学成分,共有成分达到37种,其主要组成成分相近,主要为芳樟醇(64.156%~69.464%)、石竹烯(3.188%~3.814%)、桉叶油醇(2.559%~3.511%)、樟脑(2.015%~4.215%)等。综合分析,SDE成本投入少,简便,耗时短,是一种高效快速提取植物性挥发油的方法。%In this paper, the volatile oil form the Cinnamomum camphora leaves was obtained by hydro-distillation (HD), microwave assisted hydro-distillation (MAHD), ultrasound assisted hydro-distillation (UAHD) and simultaneous distillation extraction (SDE) method. Then its chemical composition was analyzed and compared by gas chromatography mass spectrometry(GC-MS). The results showed that the yield of MAHD was 3.1%, which was a little more than that of SDE(2.8%). 79 chemical constituents were separated and identified from above methods, there were 37 common components. The main compounds were linalool(64.156%~69.464%), caryophyllene(3.188%~3.814%), eucalyptol(2.559%~3.511%), camphor(2.559%~3.511%), etc. The SDE method offers important over traditional method, lower cost, easy and shorter extraction time. So SDE is an effective method for extract volatile oil from aromatic plants and has advantages of higher yield and quick exaction.

  12. [Analyze on chemical compositions of Dalbergia odorifera essential oils extracted by CO2-supercritical-fluid-extraction and steam distillation extraction].

    Science.gov (United States)

    Song, Wei-Feng; Liao, Mei-Jin; Luo, Shu-Yuan

    2011-11-01

    To analyze the chemical compositions of Dalbergia odorifera essential oils extacted by CO2-supercritical-fluid-extraction (SFE-CO2) and steam distillation extraction (SD). The essential oils of Dalbergia odorifera were extracted by steam distillation extraction and SFE-CO2. The chemical components were separated and analyzed by gas chromatography-mass spectrometry. 12 compounds were identified in SFE sample. The major components from essential oils were 2-propenoic acid-3(4-methoxyphenyl)-ethyl ester (14.53%), nerolidol (14.95%), ageratochromene (1.33%). 9 compounds were identified in SD sample. The major components from essential oils were nerolidol (26.61%), cedrol (1.65%). The SFE method is better than the SD method in reliability stability and reproducibility, and suitable for essential oils extraction of Dalbergia odorifera.

  13. The effect of extraction method on antioxidant activity of Atractylis babelii Hochr. leaves and flowers extracts

    Directory of Open Access Journals (Sweden)

    Khadidja Boudebaz

    2015-04-01

    Full Text Available In this study, leaves and flowers of Atractylis babelii were chosen to investigate their antioxidant activities. Thus, a comparison between the antioxidant properties of ethanolic crude extracts obtained by two extraction methods, maceration and soxhlet extraction, was performed using two different tests; DPPH and ABTS radical assays. Besides, total polyphenol, flavonoid and condensed tannin contents were determined in leaves and flowers of Atractylis babelii by colorimetric methods. The results showed that there was no correlation between phenolic contents of plant parts and their antioxidant activity. Whereas, leaves and flowers of Atractylis babelii showed that both had almost similar phenolic contents, while their antioxidant activity depended on the plant parts. Furthermore, the antioxidant activity of plant parts was also depended on extraction method. Such a result may be likely ascribed to a variety of chemical composition can be found in Atractylis babelii extracts which has been related to its antioxidant properties.

  14. Apparatus and methods for detecting chemical permeation

    Science.gov (United States)

    Vo-Dinh, Tuan

    1994-01-01

    Apparatus and methods for detecting the permeation of hazardous or toxic chemicals through protective clothing are disclosed. The hazardous or toxic chemicals of interest do not possess the spectral characteristic of luminescence. The apparatus and methods utilize a spectrochemical modification technique to detect the luminescence quenching of an indicator compound which upon permeation of the chemical through the protective clothing, the indicator is exposed to the chemical, thus indicating chemical permeation.

  15. Chemical Characterization of Different Sumac and Pomegranate Extracts Effective against Botrytis cinerea Rots

    OpenAIRE

    Romeo, Flora V.; Gabriele Ballistreri; Simona Fabroni; Sonia Pangallo; Maria Giulia Li Destri Nicosia; Leonardo Schena; Paolo Rapisarda

    2015-01-01

    Pomegranate (Punica granatum L.) peel and sumac (Rhus coriaria L.) fruit and leaf extracts were chemically characterized and their ability to inhibit table grape (cv. Italia) rots caused by Botrytis cinerea was evaluated on artificially inoculated berries. Different extraction methods were applied and extracts were characterized through Ultra Fast High Performance Liquid Chromatography coupled to Photodiode array detector and Electrospray ionization Mass spectrometer (UPLC-PDA-ESI/MSn) for th...

  16. Automated extraction of chemical structure information from digital raster images

    Directory of Open Access Journals (Sweden)

    Shedden Kerby A

    2009-02-01

    Full Text Available Abstract Background To search for chemical structures in research articles, diagrams or text representing molecules need to be translated to a standard chemical file format compatible with cheminformatic search engines. Nevertheless, chemical information contained in research articles is often referenced as analog diagrams of chemical structures embedded in digital raster images. To automate analog-to-digital conversion of chemical structure diagrams in scientific research articles, several software systems have been developed. But their algorithmic performance and utility in cheminformatic research have not been investigated. Results This paper aims to provide critical reviews for these systems and also report our recent development of ChemReader – a fully automated tool for extracting chemical structure diagrams in research articles and converting them into standard, searchable chemical file formats. Basic algorithms for recognizing lines and letters representing bonds and atoms in chemical structure diagrams can be independently run in sequence from a graphical user interface-and the algorithm parameters can be readily changed-to facilitate additional development specifically tailored to a chemical database annotation scheme. Compared with existing software programs such as OSRA, Kekule, and CLiDE, our results indicate that ChemReader outperforms other software systems on several sets of sample images from diverse sources in terms of the rate of correct outputs and the accuracy on extracting molecular substructure patterns. Conclusion The availability of ChemReader as a cheminformatic tool for extracting chemical structure information from digital raster images allows research and development groups to enrich their chemical structure databases by annotating the entries with published research articles. Based on its stable performance and high accuracy, ChemReader may be sufficiently accurate for annotating the chemical database with links

  17. Method of producing a chemical hydride

    Science.gov (United States)

    Klingler, Kerry M.; Zollinger, William T.; Wilding, Bruce M.; Bingham, Dennis N.; Wendt, Kraig M.

    2007-11-13

    A method of producing a chemical hydride is described and which includes selecting a composition having chemical bonds and which is capable of forming a chemical hydride; providing a source of a hydrocarbon; and reacting the composition with the source of the hydrocarbon to generate a chemical hydride.

  18. Status of the Reactive Extraction as a Method of Separation

    Directory of Open Access Journals (Sweden)

    Dipaloy Datta

    2015-01-01

    Full Text Available The prospective function of a novel energy efficient fermentation technology has been getting great attention in the past fifty years due to the quick raise in petroleum costs. Fermentation chemicals are still limited in the modern market in huge part because of trouble in recovery of carboxylic acids. Therefore, it is needed considerable development in the current recovery technology. Carboxylic acids have been used as the majority of fermentation chemicals. This paper presents a state-of-the-art review on the reactive extraction of carboxylic acids from fermentation broths. This paper principally focuses on reactive extraction that is found to be a capable option to the proper recovery methods.

  19. 不同提取方法对艾叶挥发油成分的影响%Effect of Different Extraction Methods on the Chemical Constituents of Essential Oils from FOLIUM ARTEMISIAE ARGYI

    Institute of Scientific and Technical Information of China (English)

    石琳; 阳元娥; 姚勇芳

    2011-01-01

    [Objective] To study the effect of different extraction methods on the chemical constituents of essential oils from FOLIUM ARTEMISI-AE ARGYI. [Method] The essential oils were first extracted from FOLIUM ARTEMISIAE ARGYI by steam distillation and SFE-CO2, and then qualitatively identified by GC-MS. Next, the relative content of each component was calculated by normalization method. [ Result ] There were significant differences in the chemical constituents of essential oils that were extracted from FOLIUM ARTEMISIAE ARGYI by different methods like steam distillation and SFE-CO2. The essential oils extracted by SFE-CO2 mainly contained 1,2-benzenedicarboxylic acid-2-ethylhexyl mono ester (17.81%) and l,2,3,4,4a,5,6,8a-octahydro-7-methyl-4-methylene-l-(l-methylethyl)-( la. Alpha. ,4a. Alpha. ,8a. Alpha. )-naphthalene (11.13%), while that extracted by steam distillation mainly contained 4,6,6-trimethyl-[ lS-( la,2β,5a) ]-bicyclo [3. 1. 1 ] hept-3-en-2-ol (22.05%), 4-methyl-l-(l-methylethyl)-[lS-(l. Alpha. , 4. Beta. ,5. Alpha. ) ]-bicyclo[3. 1.0]hexan-3-one (10.69%) and caryophyllene oxide (10.62% ). [Conclusion] The essential oils extracted from FOLIUM ARTEMISIAE ARGYI by SFE-CO2 contained more chemical constituents, especially low-polarity substance. However, the chemical constituents of essential oils extracted by steam distillation focused on higher-polarity alcohols. It was difficult to extract low-polarity volatile components by steam distillation.%[目的]研究不同提取方法对艾叶挥发油成分的影响.[方法]采用水蒸气蒸馏法和CO2超临界萃取法提取艾叶中的挥发油,然后用气相色谱-质谱联用法对挥发油的化学成分进行鉴定,用归一法计算各组分的相对百分含量.[结果]采用水蒸气蒸馏法和CO2超临界萃取法提取的艾叶挥发油化学成分存在较大差异;超临界萃取得到艾叶挥发油的主要成分为1,2-苯二羧酸-2-乙基己基酯(17.81%)、1,2,3,4,4a,5,6,8a-八氢-7-

  20. Solvent Extraction of Chemical Attribution Signature Compounds from Painted Wall Board: Final Report

    Energy Technology Data Exchange (ETDEWEB)

    Wahl, Jon H.; Colburn, Heather A.

    2009-10-29

    This report summarizes work that developed a robust solvent extraction procedure for recovery of chemical attribution signature (CAS) compound dimethyl methyl phosphonate (DMMP) (as well as diethyl methyl phosphonate (DEMP), diethyl methyl phosphonothioate (DEMPT), and diisopropyl methyl phosphonate (DIMP)) from painted wall board (PWB), which was selected previously as the exposed media by the chemical attribution scientific working group (CASWG). An accelerated solvent extraction approach was examined to determine the most effective method of extraction from PWB. Three different solvent systems were examined, which varied in solvent strength and polarity (i.e., 1:1 dichloromethane : acetone,100% methanol, and 1% isopropanol in pentane) with a 1:1 methylene chloride : acetone mixture having the most robust and consistent extraction for four original target organophosphorus compounds. The optimum extraction solvent was determined based on the extraction efficiency of the target analytes from spiked painted wallboard as determined by gas chromatography x gas chromatography mass spectrometry (GCxGC-MS) analysis of the extract. An average extraction efficiency of approximately 60% was obtained for these four compounds. The extraction approach was further demonstrated by extracting and detecting the chemical impurities present in neat DMMP that was vapor-deposited onto painted wallboard tickets.

  1. Chemical profile and antinociceptive efficacy of Rheedia longifolia leaf extract.

    Science.gov (United States)

    Santos, José A A; Calheiros, Andrea; Nascimento, Diogo D; Bérenger, Ana Luiza R; Amendoeira, Fábio C; Castro-Faria-Neto, Hugo C; Figueiredo, Maria Raquel; Alves, Luiz A; Frutuoso, Valber da Silva

    2011-09-01

    Different species of the family Clusiaceae, including Rheedia longifolia, are used in folk medicine to treat inflammatory diseases. This family is largely distributed in tropical and subtropical areas of Brazil, but their chemical and pharmacological properties have been the subject of a few studies. In previous studies, we found that the aqueous extract from R. longifolia leaves presented important anti-inflammatory and analgesic activity. We investigated the chemical profile of R. longifolia and characterized the pharmacological effect of different chemically identified fractions in pharmacological models of neurogenic and inflammatory nociception. The pharmacological tests showed that oral treatment with aqueous crude extract and fractions of methanol extract of R. longifolia leaf induced a significant antinociceptive effect using von Frey filaments. In addition, the most polar fractions presented antinociceptive activity in a neurogenic model of nociception (capsaicin model). The chromatographic analysis indicated the presence of bisflavonoids in the fractions obtained from the methanol extract. These results suggest that bisflavonoids found in methanol-extracted fractions are involved in the inhibition of inflammatory and neurogenic nociception. It is important that the R. longifolia aqueous extract treatment inhibited ulcer formation induced by indomethacin, suggesting an anti-ulcerogenic activity closely associated with its analgesic effect.

  2. Determination of 2-, 3-, 4-methylpentanoic and cyclohexanecarboxylic acids in wine: development of a selective method based on solid phase extraction and gas chromatography-negative chemical ionization mass spectrometry and its application to different wines and alcoholic beverages.

    Science.gov (United States)

    Gracia-Moreno, Elisa; Lopez, Ricardo; Ferreira, Vicente

    2015-02-13

    A method to analyse 2-methylpentanoic, 3-methylpentanoic and 4-methylpentanoic acids as well as cyclohexanecarboxylic acid has been developed and applied to wine and other alcoholic beverages. Selective isolation with solid phase extraction, derivatization with 2,3,4,5,6-pentafluorobenzyl bromide at room temperature for 30 minutes, and further analysis by gas chromatography-mass spectrometry in negative chemical ionization mode provides detection limits between 0.4 and 2.4 ng/L. Good linearity up to 3.6 μg/L, satisfactory reproducibility (RSD<10%) and signal recovery of around 100% represent a robust method of analysis. Concentration data of these analytes in wine and other alcoholic beverages are reported for the first time. The levels found ranged from the method detection limits to 2630 ng/L, 2040 ng/L and 3810 ng/L for 2-, 3- and 4-methylpentanoic acids, respectively, and to 1780 ng/L for cyclohexanecarboxylic acid. There are significant differences depending on the type of wine or beverage. Distilled beverages, beer and aged wines have higher contents in methylpentanoic and cyclohexanecarboxylic acids.

  3. Comparison of pyrethrins extraction methods efficiencies

    African Journals Online (AJOL)

    STORAGESEVER

    2010-05-03

    May 3, 2010 ... Best developed method was used for determination of pyrethrin content in three different ... There are many areas of application of .... The extractions were made on a soxtec avanti 2055 manual system ... was automated.

  4. Chemical constituents and anti-tuberculosis activity of ink extracts of cuttlefish, Sepiella inermis

    Institute of Scientific and Technical Information of China (English)

    Muthusamy Ravichandiran; Selvam Thiripurasalini; Vaithilingam Ravitchandirane; Srinivasa Gopalane; Chelladurai Stella

    2013-01-01

    Objective: To study the chemical constituents and the anti-tuberculosis activity of methanol and chloroform ink extracts of Sepiella inermis.Methods:Chemical analysis was carried out by UV-VIS spectrophotometer, FT-IR and GC-MS. Crude extracts Pulverized ink powder was extracted separately with chloroform and methanol. were tested in vitro for their activity against Mycobacterium tuberculosis using Lowenstein Jensen (L-J) medium. Activity in L-J medium was assessed by mean reduction in number of colonies on extract containing bottles as compared to extract free controls.Results:octadecadienoic acid, 9-octadecenoic acid and octadecanoic acid. The chloroform extract GC-MS of methanol extract revealed four compounds viz. hexadecanoic acid, 9, 12-containing fourteen compounds. The methanol extract exhibited anti-tuberculosis activity in L-J medium at 64 µg/mL with the observed inhibition of 14 CFU. Chloroform extract displayed a weak activity against Mycobacterium tuberculosis.Conclusions:Mycobacterium tuberculosis than chloroform extract. Since ink of sepia is available abundantly as This investigation showed the methanol extract exhibited significant activity against a waste material, further studies aimed at isolation and efficacy of active substances pave the way for new anti-tuberculosis drugs.

  5. Chemical constituents and anti-tuberculosis activity of ink extracts of cuttlefish, Sepiella inermis

    Directory of Open Access Journals (Sweden)

    Muthusamy Ravichandiran

    2013-11-01

    Full Text Available Objective: To study the chemical constituents and the anti-tuberculosis activity of methanol and chloroform ink extracts of Sepiella inermis. Methods: Pulverized ink powder was extracted separately with chloroform and methanol. Chemical analysis was carried out by UV-VIS spectrophotometer, FT-IR and GC-MS. Crude extracts were tested in vitro for their activity against Mycobacterium tuberculosis using Lowenstein Jensen (L-J medium. Activity in L-J medium was assessed by mean reduction in number of colonies on extract containing bottles as compared to extract free controls. Results: GC-MS of methanol extract revealed four compounds viz. hexadecanoic acid, 9, 12- octadecadienoic acid, 9-octadecenoic acid and octadecanoic acid. The chloroform extract containing fourteen compounds. The methanol extract exhibited anti-tuberculosis activity in L-J medium at 64 µg/mL with the observed inhibition of 14 CFU. Chloroform extract displayed a weak activity against Mycobacterium tuberculosis. Conclusions: This investigation showed the methanol extract exhibited significant activity against Mycobacterium tuberculosis than chloroform extract. Since ink of sepia is available abundantly as a waste material, further studies aimed at isolation and efficacy of active substances pave the way for new anti-tuberculosis drugs.

  6. Chemical analysis of Ginkgo biloba leaves and extracts

    NARCIS (Netherlands)

    Beek, van T.A.

    2002-01-01

    The chemical analysis and quality control of Ginkgo leaves and extracts is reviewed. Important constituents present in the medicinally used leaves are the terpene trilactones, i.e., ginkgolides A, B, C, J and bilobalide, many flavonol glycosides, biflavones, proanthocyanidins, alkylphenols, simple p

  7. On Extraction of Chemical Potentials of Quarks from Particle Transverse Momentum Spectra in High Energy Collisions

    Directory of Open Access Journals (Sweden)

    Hong Zhao

    2015-01-01

    Full Text Available We present two methods to extract the chemical potentials of quarks in high energy collisions. The first method is based on the ratios of negatively/positively charged particles, and the temperatures extracted from the transverse momentum spectra of related hadrons are needed. The second method is based on the chemical potentials of some particles, and we also need the transverse momentum spectra of related hadrons. To extract the quark chemical potentials, we would like to propose experimental collaborations to measure simultaneously not only the transverse momentum spectra of p-, p, K-, K+, π-, and π+, but also those of D-, D+, B-, and B+ (even those of Δ++, Δ-, and Ω- in high energy nuclear collisions.

  8. Method for analyzing solvent extracted sponge core

    Energy Technology Data Exchange (ETDEWEB)

    Ellington, W.E.; Calkin, C.L.

    1988-11-22

    For use in solvent extracted sponge core measurements of the oil saturation of earth formations, a method is described for quantifying the volume of oil in the fluids resulting from such extraction. The method consists of: (a) separating the solvent/oil mixture from the water in the extracted fluids, (b) distilling at least a portion of the solvent from the solvent/oil mixture substantially without co-distillation or loss of the light hydrocarbons in the mixture, (c) determining the volume contribution of the solvent remaining in the mixture, and (d) determining the volume of oil removed from the sponge by substracting the determined remaining solvent volume.

  9. Chemical reaction and separation method

    NARCIS (Netherlands)

    Jansen, J.C.; Kapteijn, F.; Strous, S.A.

    2005-01-01

    The invention is directed to process for performing a chemical reaction in a reaction mixture, which reaction produces water as by-product, wherein the reaction mixture is in contact with a hydroxy sodalite membrane, through which water produced during the reaction is removed from the reaction mixtu

  10. Chemical Safety Alert: Identifying Chemical Reactivity Hazards Preliminary Screening Method

    Science.gov (United States)

    Introduces small-to-medium-sized facilities to a method developed by Center for Chemical Process Safety (CCPS), based on a series of twelve yes-or-no questions to help determine hazards in warehousing, repackaging, blending, mixing, and processing.

  11. DNA extraction on bio-chip: history and preeminence over conventional and solid-phase extraction methods.

    Science.gov (United States)

    Ayoib, Adilah; Hashim, Uda; Gopinath, Subash C B; Md Arshad, M K

    2017-09-23

    This review covers a developmental progression on early to modern taxonomy at cellular level following the advent of electron microscopy and the advancement in deoxyribonucleic acid (DNA) extraction for expatiation of biological classification at DNA level. Here, we discuss the fundamental values of conventional chemical methods of DNA extraction using liquid/liquid extraction (LLE) followed by development of solid-phase extraction (SPE) methods, as well as recent advances in microfluidics device-based system for DNA extraction on-chip. We also discuss the importance of DNA extraction as well as the advantages over conventional chemical methods, and how Lab-on-a-Chip (LOC) system plays a crucial role for the future achievements.

  12. Newer methods of extraction of teeth

    Directory of Open Access Journals (Sweden)

    MHendra Chandha

    2016-06-01

    Full Text Available Atraumatic extraction methods are deemed to be important to minimize alveolar bone loss after tooth extraction. With the advent of such techniques, exodontia is no more a dreaded procedure in anxious patients. Newer system and techniques for extraction of teeth have evolved in the recent few decades. This article reviews and discusses new techniques to make simple and complex exodontias more efficient with improved patient outcomes. This includes physics forceps, powered periotome, piezosurgery, benex extractor, sonic instrument for bone surgery, lasers.

  13. Antibacterial activity of coffee extracts and selected coffee chemical compounds against enterobacteria.

    Science.gov (United States)

    Almeida, Ana Amélia P; Farah, Adriana; Silva, Daniela A M; Nunan, Elzíria A; Glória, M Beatriz A

    2006-11-15

    The in vitro antimicrobial activity of commercial coffee extracts and chemical compounds was investigated on nine strains of enterobacteria. The antimicrobial activity investigated by the disc diffusion method was observed in both the extracts and tested chemical compounds. Even though pH, color, and the contents of trigonelline, caffeine, and chlorogenic acids differed significantly among the coffee extracts, no significant differences were observed in their antimicrobial activity. Caffeic acid and trigonelline showed similar inhibitory effect against the growth of the microorganisms. Caffeine, chlorogenic acid, and protocatechuic acid showed particularly strong effect against Serratia marcescens and Enterobacter cloacae. The IC(50) and IC(90) for the compounds determined by the microtiter plate method indicated that trigonelline, caffeine, and protocatechuic acids are potential natural antimicrobial agents against Salmonella enterica. The concentrations of caffeine found in coffee extracts are enough to warrant 50% of the antimicrobial effect against S. enterica, which is relevant to human safety.

  14. Reaction Decoder Tool (RDT): extracting features from chemical reactions

    Science.gov (United States)

    Rahman, Syed Asad; Torrance, Gilliean; Baldacci, Lorenzo; Martínez Cuesta, Sergio; Fenninger, Franz; Gopal, Nimish; Choudhary, Saket; May, John W.; Holliday, Gemma L.; Steinbeck, Christoph; Thornton, Janet M.

    2016-01-01

    Summary: Extracting chemical features like Atom–Atom Mapping (AAM), Bond Changes (BCs) and Reaction Centres from biochemical reactions helps us understand the chemical composition of enzymatic reactions. Reaction Decoder is a robust command line tool, which performs this task with high accuracy. It supports standard chemical input/output exchange formats i.e. RXN/SMILES, computes AAM, highlights BCs and creates images of the mapped reaction. This aids in the analysis of metabolic pathways and the ability to perform comparative studies of chemical reactions based on these features. Availability and implementation: This software is implemented in Java, supported on Windows, Linux and Mac OSX, and freely available at https://github.com/asad/ReactionDecoder Contact: asad@ebi.ac.uk or s9asad@gmail.com PMID:27153692

  15. Reaction Decoder Tool (RDT): extracting features from chemical reactions.

    Science.gov (United States)

    Rahman, Syed Asad; Torrance, Gilliean; Baldacci, Lorenzo; Martínez Cuesta, Sergio; Fenninger, Franz; Gopal, Nimish; Choudhary, Saket; May, John W; Holliday, Gemma L; Steinbeck, Christoph; Thornton, Janet M

    2016-07-01

    Extracting chemical features like Atom-Atom Mapping (AAM), Bond Changes (BCs) and Reaction Centres from biochemical reactions helps us understand the chemical composition of enzymatic reactions. Reaction Decoder is a robust command line tool, which performs this task with high accuracy. It supports standard chemical input/output exchange formats i.e. RXN/SMILES, computes AAM, highlights BCs and creates images of the mapped reaction. This aids in the analysis of metabolic pathways and the ability to perform comparative studies of chemical reactions based on these features. This software is implemented in Java, supported on Windows, Linux and Mac OSX, and freely available at https://github.com/asad/ReactionDecoder : asad@ebi.ac.uk or s9asad@gmail.com. © The Author 2016. Published by Oxford University Press.

  16. Chemical Methods for the Production of Proteins

    Energy Technology Data Exchange (ETDEWEB)

    Kent, Stephen B.H.

    2008-09-15

    The goal of this research program was to develop improved methods for chemical peptide and protein synthesis, and to apply these methods to the total synthesis of small proteins (<80 amino acids) & integral membrane proteins.

  17. Chemically extracted nanocellulose from sisal fibres by a simple and industrially relevant process

    DEFF Research Database (Denmark)

    Trifol Guzman, Jon; Sillard, Cecile; Plackett, D.

    2017-01-01

    A novel type of acetylated cellulose nanofibre (CNF) was extracted successfully from sisal fibres using chemical methods. Initially, a strong alkali treatment was used to swell the fibres, followed by a bleaching step to remove the residual lignin and finally an acetylation step to reduce...... in the prepared CNF dispersion. Finally, CNF films with alkali extracts were also prepared, resulting in flatter films with an increased mass yield and improved mechanical strength....

  18. CHEMICAL FIXATION OF CARBON DIOXIDE USING SOLVENT EXTRACTION

    OpenAIRE

    SASAMOTO, Naoki; MASHIMO, Miki; MATSUMOTO, Shigeno; Yamamoto, Hideki; SHIBATA, Junji

    1996-01-01

    Investigations were carried out to create a chemical fixation process,where carbon dioxide and sodium chloride solution are converted to sodium hydrogen carbonate and hydrochloric acid. Because the reaction has a large and positive free energy change,it does not proceed unless a suitable condition is established.The reaction is able to proceed if hydrochloric acid,which is one of the reaction products,is removed from the reaction system by extraction with amine.Stripping of hydrochloric acid ...

  19. Chemical Tracer Methods: Chapter 7

    Science.gov (United States)

    Healy, Richard W.

    2017-01-01

    Tracers have a wide variety of uses in hydrologic studies: providing quantitative or qualitative estimates of recharge, identifying sources of recharge, providing information on velocities and travel times of water movement, assessing the importance of preferential flow paths, providing information on hydrodynamic dispersion, and providing data for calibration of water flow and solute-transport models (Walker, 1998; Cook and Herczeg, 2000; Scanlon et al., 2002b). Tracers generally are ions, isotopes, or gases that move with water and that can be detected in the atmosphere, in surface waters, and in the subsurface. Heat also is transported by water; therefore, temperatures can be used to trace water movement. This chapter focuses on the use of chemical and isotopic tracers in the subsurface to estimate recharge. Tracer use in surface-water studies to determine groundwater discharge to streams is addressed in Chapter 4; the use of temperature as a tracer is described in Chapter 8.Following the nomenclature of Scanlon et al. (2002b), tracers are grouped into three categories: natural environmental tracers, historical tracers, and applied tracers. Natural environmental tracers are those that are transported to or created within the atmosphere under natural processes; these tracers are carried to the Earth’s surface as wet or dry atmospheric deposition. The most commonly used natural environmental tracer is chloride (Cl) (Allison and Hughes, 1978). Ocean water, through the process of evaporation, is the primary source of atmospheric Cl. Other tracers in this category include chlorine-36 (36Cl) and tritium (3H); these two isotopes are produced naturally in the Earth’s atmosphere; however, there are additional anthropogenic sources of them.

  20. EVALUATION OF GEOCHEMICAL QUALITY CONTROL IN DETERMINATION OF Mn IN SOILS USING A SEQUENTIAL CHEMICAL EXTRACTION

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Sequential chemical extraction procedure has been widely used to partition particulate trace metals into various fractions and to describe the distribution and the statue of trace metals in geo-environment. One sequential chemical extraction procedure was employed here to partition various fractions of Mn in soils. The experiment was designed with quality controlling concept in order to show sampling and analytical error. Experimental results obtained on duplicate analysis of all soil samples demonstrated that the precision was less than 10% (at 95% confidence level). The accuracy was estimated by comparing the accepted total concentration of Mn in standard reference materials (SRMs) with the measured sum of the individual fractions. The recovery of Mn from SRM1 and SRM2 was 94.1% and 98.4% , respectively. The detection limit, accuracy and precision of the sequential chemical extraction procedure were discussed in detailed. All the results suggest that the trueness of the analytical method is satisfactory.

  1. Chemical Composition and Biological Activity of Extracts Obtained by Supercritical Extraction and Ethanolic Extraction of Brown, Green and Red Propolis Derived from Different Geographic Regions in Brazil

    Science.gov (United States)

    Machado, Bruna Aparecida Souza; Silva, Rejane Pina Dantas; Barreto, Gabriele de Abreu; Costa, Samantha Serra; da Silva, Danielle Figuerêdo; Brandão, Hugo Neves; da Rocha, José Luiz Carneiro; Dellagostin, Odir Antônio; Henriques, João Antônio Pegas; Umsza-Guez, Marcelo Andres; Padilha, Francine Ferreira

    2016-01-01

    The variations in the chemical composition, and consequently, on the biological activity of the propolis, are associated with its type and geographic origin. Considering this fact, this study evaluated propolis extracts obtained by supercritical extraction (SCO2) and ethanolic extraction (EtOH), in eight samples of different types of propolis (red, green and brown), collected from different regions in Brazil. The content of phenolic compounds, flavonoids, in vitro antioxidant activity (DPPH and ABTS), Artepillin C, p-coumaric acid and antimicrobial activity against two bacteria were determined for all extracts. For the EtOH extracts, the anti-proliferative activity regarding the cell lines of B16F10, were also evaluated. Amongst the samples evaluated, the red propolis from the Brazilian Northeast (states of Sergipe and Alagoas) showed the higher biological potential, as well as the larger content of antioxidant compounds. The best results were shown for the extracts obtained through the conventional extraction method (EtOH). However, the highest concentrations of Artepillin C and p-coumaric acid were identified in the extracts from SCO2, indicating a higher selectivity for the extraction of these compounds. It was verified that the composition and biological activity of the Brazilian propolis vary significantly, depending on the type of sample and geographical area of collection. PMID:26745799

  2. Chemical Composition and Biological Activity of Extracts Obtained by Supercritical Extraction and Ethanolic Extraction of Brown, Green and Red Propolis Derived from Different Geographic Regions in Brazil.

    Directory of Open Access Journals (Sweden)

    Bruna Aparecida Souza Machado

    Full Text Available The variations in the chemical composition, and consequently, on the biological activity of the propolis, are associated with its type and geographic origin. Considering this fact, this study evaluated propolis extracts obtained by supercritical extraction (SCO2 and ethanolic extraction (EtOH, in eight samples of different types of propolis (red, green and brown, collected from different regions in Brazil. The content of phenolic compounds, flavonoids, in vitro antioxidant activity (DPPH and ABTS, Artepillin C, p-coumaric acid and antimicrobial activity against two bacteria were determined for all extracts. For the EtOH extracts, the anti-proliferative activity regarding the cell lines of B16F10, were also evaluated. Amongst the samples evaluated, the red propolis from the Brazilian Northeast (states of Sergipe and Alagoas showed the higher biological potential, as well as the larger content of antioxidant compounds. The best results were shown for the extracts obtained through the conventional extraction method (EtOH. However, the highest concentrations of Artepillin C and p-coumaric acid were identified in the extracts from SCO2, indicating a higher selectivity for the extraction of these compounds. It was verified that the composition and biological activity of the Brazilian propolis vary significantly, depending on the type of sample and geographical area of collection.

  3. Chemical Composition and Biological Activity of Extracts Obtained by Supercritical Extraction and Ethanolic Extraction of Brown, Green and Red Propolis Derived from Different Geographic Regions in Brazil.

    Science.gov (United States)

    Machado, Bruna Aparecida Souza; Silva, Rejane Pina Dantas; Barreto, Gabriele de Abreu; Costa, Samantha Serra; Silva, Danielle Figuerêdo da; Brandão, Hugo Neves; Rocha, José Luiz Carneiro da; Dellagostin, Odir Antônio; Henriques, João Antônio Pegas; Umsza-Guez, Marcelo Andres; Padilha, Francine Ferreira

    2016-01-01

    The variations in the chemical composition, and consequently, on the biological activity of the propolis, are associated with its type and geographic origin. Considering this fact, this study evaluated propolis extracts obtained by supercritical extraction (SCO2) and ethanolic extraction (EtOH), in eight samples of different types of propolis (red, green and brown), collected from different regions in Brazil. The content of phenolic compounds, flavonoids, in vitro antioxidant activity (DPPH and ABTS), Artepillin C, p-coumaric acid and antimicrobial activity against two bacteria were determined for all extracts. For the EtOH extracts, the anti-proliferative activity regarding the cell lines of B16F10, were also evaluated. Amongst the samples evaluated, the red propolis from the Brazilian Northeast (states of Sergipe and Alagoas) showed the higher biological potential, as well as the larger content of antioxidant compounds. The best results were shown for the extracts obtained through the conventional extraction method (EtOH). However, the highest concentrations of Artepillin C and p-coumaric acid were identified in the extracts from SCO2, indicating a higher selectivity for the extraction of these compounds. It was verified that the composition and biological activity of the Brazilian propolis vary significantly, depending on the type of sample and geographical area of collection.

  4. Review and evaluation of extractants for strontium removal using magnetically assisted chemical separation

    Energy Technology Data Exchange (ETDEWEB)

    Bauer, C.B.; Rogers, R.D. [Northern Illinois Univ., De Kalb, IL (United States). Dept. of Chemistry; Nunez, L.; Ziemer, M.D.; Pleune, T.T.; Vandegrift, G.F. [Argonne National Lab., IL (United States)

    1995-11-01

    A literature review on extractants for strontium removal was initially performed at Northern Illinois University to assess their potential in magnetically assisted chemical separation. A series of potential strontium extractants was systematically evaluated there using radioanalytical methods. Initial experiments were designed to test the uptake of strontium from nitric acid using several samples of magnetic extractant particles that were coated with various crown ether ligands. High partition coefficient (K{sub d}) values for stimulant tank waste were obtained. Further studies demonstrated that the large partitioning was due to uncoated particles.

  5. Fast title extraction method for business documents

    Science.gov (United States)

    Katsuyama, Yutaka; Naoi, Satoshi

    1997-04-01

    Conventional electronic document filing systems are inconvenient because the user must specify the keywords in each document for later searches. To solve this problem, automatic keyword extraction methods using natural language processing and character recognition have been developed. However, these methods are slow, especially for japanese documents. To develop a practical electronic document filing system, we focused on the extraction of keyword areas from a document by image processing. Our fast title extraction method can automatically extract titles as keywords from business documents. All character strings are evaluated for similarity by rating points associated with title similarity. We classified these points as four items: character sitting size, position of character strings, relative position among character strings, and string attribution. Finally, the character string that has the highest rating is selected as the title area. The character recognition process is carried out on the selected area. It is fast because this process must recognize a small number of patterns in the restricted area only, and not throughout the entire document. The mean performance of this method is an accuracy of about 91 percent and a 1.8 sec. processing time for an examination of 100 Japanese business documents.

  6. Chemical profile and antimicrobial activity of Boldo (Peumus boldus Molina extracts obtained by compressed carbon dioxide extraction

    Directory of Open Access Journals (Sweden)

    M. Mazutti

    2008-06-01

    Full Text Available This work reports the effects of temperature (20 to 50ºC and pressure (100 to 250 bar on the extraction yield, chemical characteristics and antimicrobial activity of extracts of Peumus boldus Molina obtained by compressed carbon dioxide extraction. Results showed that the extraction variables affect the extraction yield and the chemical distribution of the major compounds present in the extracts. The extracts were chemically analyzed with regard to 1,8-cineole, trans-sabinene, pinocarveol, pinocarvone, 4-terpineol, ascaridole, piperitone oxide, limonene dioxide and n-eicosane in a GC/MSD. Antimicrobial tests demonstrated that the high-pressure CO2 extracts had activity against 13 bacteria and that better action was verified with extracts obtained at a lower CO2 extraction density and a higher temperature.

  7. Reactive iron(III) in sediments: Chemical versus microbial extractions

    Science.gov (United States)

    Hyacinthe, C.; Bonneville, S.; Van Cappellen, P.

    2006-08-01

    The availability of particulate Fe(III) to iron reducing microbial communities in sediments and soils is generally inferred indirectly by performing chemical extractions. In this study, the bioavailability of mineral-bound Fe(III) in intertidal sediments of a eutrophic estuary is assessed directly by measuring the kinetics and extent of Fe(III) utilization by the iron reducing microorganism Shewanella putrefaciens, in the presence of excess electron donor. Microbial Fe(III) reduction is compared to chemical dissolution of iron from the same sediments in buffered ascorbate-citrate solution (pH 7.5), ascorbic acid (pH 2), and 1 M HCl. The results confirm that ascorbate at near-neutral pH selectively reduces the reactive Fe(III) pool, while the acid extractants mobilize additional Fe(II) and less reactive Fe(III) mineral phases. Furthermore, the maximum concentrations of Fe(III) reducible by S. putrefaciens correlate linearly with the iron concentrations extracted by buffered ascorbate-citrate solution, but not with those of the acid extractions. However, on average, only 65% of the Fe(III) reduced in buffered ascorbate-citrate solution can be utilized by S. putrefaciens, probably due to physical inaccessibility of the remaining fraction of reactive Fe(III) to the cells. While the microbial and abiotic reaction kinetics further indicate that reduction by ascorbate at near-neutral pH most closely resembles microbial reduction of the sediment Fe(III) pool by S. putrefaciens, the results also highlight fundamental differences between chemical reductive dissolution and microbial utilization of mineral-bound ferric iron.

  8. 不同饮水消毒方法对水中有机提取物毒性的影响%Toxicity of Organic Chemicals Extracted from Surface Water Treated With Different Disinfect Methods

    Institute of Scientific and Technical Information of China (English)

    陈建文; 邓菁; 吕斌; 田峰; 张梦; 伍雅婷; 刘飞

    2011-01-01

    Objective To explore the effects of different disinfect methods on the oxidative stress and apoptosis of HepG2 cells induced by organic chemicals extracted from drinking water. Methods Water from Hanjiang river was disinfected by different sequential treatments using ozone(()3 )> chloride dioxide(Cl()2 ) or chlorine(CI2 ) as the primary disinfectant followed by chlorine(Cl2 )as the secondary disinfectant. Oxidative stress and apoptosis level of HepG2 cells treated by organic chemicals extracted from water treated by different sequential treatments were analyzed. Results Sequential treatments with O3 or C1O2 as primary disinfectant following chlorine disinfection reduced chlorinated by-products, but did not reduce oxidative stress and apoptosis level in HepG2 cells. Conclusion Sequential treatments with O3 or C1O2 as primary disinfectant following chlorine disinfection reduced chlorinated by-products without significantly reducing toxicity of disinfected Hanjiang water.%目的 探讨不同消毒方法对饮水中有机提取物所致人肝肿瘤HepG2细胞的氧化损伤和凋亡作用的影响.方法 分别采用不同预消毒方法(氯、二氧化氯或臭氧)结合氯消毒对汉江水进行消毒,提取消毒水中有机物,分别测定不同消毒水中有机提取物对人肝肿瘤HepG2细胞活性氧族(ROS)、丙二醛(MDA)、谷胱甘肽过氧化物酶(GSH-Px)、超氧化物歧化酶(SOD)水平及细胞凋亡率的影响.结果 不同消毒方法对水中有机提取物的氧化应激水平的影响无明显差异,对细胞凋亡的影响也无明显差异.结论 与常规的氯预消毒方法比较,二氧化氯以及臭氧预消毒的汉江水对HepG2细胞的氧化应激和凋亡的影响无明显差异.对于有机物含量较高的汉江水,单纯改变预消毒方法,并不能减低水中有机提取物的氧化应激水平和凋亡毒性.

  9. Comparison of Chemical and Physical-chemical Wastewater Discoloring Methods

    Directory of Open Access Journals (Sweden)

    Durašević, V.

    2007-11-01

    Full Text Available Today's chemical and physical-chemical wastewater discoloration methods do not completely meet demands regarding degree of discoloration. In this paper discoloration was performed using Fenton (FeSO4 . 7 H2O + H2O2 + H2SO4 and Fenton-like (FeCl3 . 6 H2O + H2O2 + HCOOH chemical methods and physical-chemical method of coagulation/flocculation (using poly-electrolyte (POEL combining anion active coagulant (modified poly-acrylamides and cationic flocculant (product of nitrogen compounds in combination with adsorption on activated carbon. Suitability of aforementioned methods was investigated on reactive and acid dyes, regarding their most common use in the textile industry. Also, investigations on dyes of different chromogen (anthraquinone, phthalocyanine, azo and xanthene were carried out in order to determine the importance of molecular spatial structure. Oxidative effect of Fenton and Fenton-like reagents resulted in decomposition of colored chromogen and high degree of discoloration. However, the problem is the inability of adding POEL in stechiometrical ratio (also present in physical-chemical methods, when the phenomenon of overdosing coagulants occurs in order to obtain a higher degree of discoloration, creating a potential danger of burdening water with POEL. Input and output water quality was controlled through spectrophotometric measurements and standard biological parameters. In addition, part of the investigations concerned industrial wastewaters obtained from dyeing cotton materials using reactive dye (C. I. Reactive Blue 19, a process that demands the use of vast amounts of electrolytes. Also, investigations of industrial wastewaters was labeled as a crucial step carried out in order to avoid serious misassumptions and false conclusions, which may arise if dyeing processes are only simulated in the laboratory.

  10. A new method for stable lead isotope extraction from seawater

    Energy Technology Data Exchange (ETDEWEB)

    Zurbrick, Cheryl M., E-mail: CZurbric@ucsc.edu [WIGS, Department of Microbiology and Environmental Toxicology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95064 (United States); Gallon, Céline [Institute of Marine Sciences, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95064 (United States); Flegal, A. Russell [WIGS, Department of Microbiology and Environmental Toxicology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95064 (United States); Institute of Marine Sciences, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95064 (United States)

    2013-10-24

    Graphical abstract: -- Highlights: •We present a relatively fast (2.5–6.5 h), semi-automated system to extract Pb from seawater. •Extraction requires few chemicals and has a relatively low blank (0.7 pmol kg{sup −1}). •We compare analyses of Pb isotopes by HR ICP-MS with those by MC-ICP-MS. -- Abstract: A new technique for stable lead (Pb) isotope extraction from seawater is established using Toyopearl AF-Chelate 650 M{sup ®} resin (Tosoh Bioscience LLC). This new method is advantageous because it is semi-automated and relatively fast; in addition it introduces a relatively low blank by minimizing the volume of chemicals used in the extraction. Subsequent analyses by HR ICP-MS have a good relative external precision (2σ) of 3.5‰ for {sup 206}Pb/{sup 207}Pb, while analyses by MC-ICP-MS have a better relative external precision of 0.6‰. However, Pb sample concentrations limit MC-ICP-MS analyses to {sup 206}Pb, {sup 207}Pb, and {sup 208}Pb. The method was validated by processing the common Pb isotope reference material NIST SRM-981 and several GEOTRACES intercalibration samples, followed by analyses by HR ICP-MS, all of which showed good agreement with previously reported values.

  11. Chemical Analysis and Biological Activity of Jordanian Chamomile Extracts

    Directory of Open Access Journals (Sweden)

    Nawal Hassan Al Bahtiti

    2012-02-01

    Full Text Available The Jordanian chamomile (Matricaria chamomilla has been researched more thoroughly to evaluate its useful properties. It is investigated and found that Jordanian chamomile is rich in phenolic compounds, with beneficial biological activities. By applying the most promising HPLC method, the content of total phenolics in methanolic extract was determined according to the Folin-Clocalteu procedure, and was found (GAE>20 mg/g. The flavonoid types were found as flavones and flavonolos.The minimum inhibitory concentration values for methanolic extracts of Jordanian chamomile were determined for different kinds of bacteria. The extracts have activity against Staphylococcus aurous, candida albicans, Esherichia Coli, Betula pubescens and Pinus sylvestris. The activity has been observed to be due to the tannins and a pigenin present in the extract. To utilize these significant sources of natural compounds, further characterization of phenolic composition is needed.

  12. Comparison of DNA and RNA extraction methods for mummified tissues.

    Science.gov (United States)

    Konomi, Nami; Lebwohl, Eve; Zhang, David

    2002-12-01

    Nucleic acids extracted from mummified tissues are valuable materials for the study of ancient human beings. Significant difficulty in extracting nucleic acids from mummified tissues has been reported due to chemical modification and degradation. The goal of this study was to determine a method that is more efficient for DNA and RNA extraction from mummified tissues. Twelve mummy specimens were analyzed with 9 different nucleic acid extraction methods, including guanidium thiocyanate (GTC) and proteinase K/detergent based methods prepared in our laboratory or purchased. Glyceraldehyde 3-phosphate dehydrogenase DNA and beta-actin RNA were used as markers for the presence of adequate DNA and RNA, respectively, for PCR and RT-PCR amplification. Our results show that 5 M GTC is more efficient of releasing nucleic acids from mummified tissue than proteinase K/detergent, and phenol/chloroform extraction with an additional chloroform step is more efficient than phenol/chloroform along. We were able to isolate DNAs from all 12 specimens and RNAs from 8 of 12 specimens, and the nucleic acids were sufficient for PCR and RT-PCR analysis. We further tested hepatitis viruses including hepatitis B virus, hepatitis C virus, hepatitis G virus, and TT virus DNA, and fail to detect these viruses in all 12 specimens.

  13. CHEMDNER: The drugs and chemical names extraction challenge.

    Science.gov (United States)

    Krallinger, Martin; Leitner, Florian; Rabal, Obdulia; Vazquez, Miguel; Oyarzabal, Julen; Valencia, Alfonso

    2015-01-01

    Natural language processing (NLP) and text mining technologies for the chemical domain (ChemNLP or chemical text mining) are key to improve the access and integration of information from unstructured data such as patents or the scientific literature. Therefore, the BioCreative organizers posed the CHEMDNER (chemical compound and drug name recognition) community challenge, which promoted the development of novel, competitive and accessible chemical text mining systems. This task allowed a comparative assessment of the performance of various methodologies using a carefully prepared collection of manually labeled text prepared by specially trained chemists as Gold Standard data. We evaluated two important aspects: one covered the indexing of documents with chemicals (chemical document indexing - CDI task), and the other was concerned with finding the exact mentions of chemicals in text (chemical entity mention recognition - CEM task). 27 teams (23 academic and 4 commercial, a total of 87 researchers) returned results for the CHEMDNER tasks: 26 teams for CEM and 23 for the CDI task. Top scoring teams obtained an F-score of 87.39% for the CEM task and 88.20% for the CDI task, a very promising result when compared to the agreement between human annotators (91%). The strategies used to detect chemicals included machine learning methods (e.g. conditional random fields) using a variety of features, chemistry and drug lexica, and domain-specific rules. We expect that the tools and resources resulting from this effort will have an impact in future developments of chemical text mining applications and will form the basis to find related chemical information for the detected entities, such as toxicological or pharmacogenomic properties.

  14. Extraction time and temperature affect the extraction efficiencies of coumarin and phenylpropanoids from Cinnamomum cassia bark using a microwave-assisted extraction method.

    Science.gov (United States)

    Kim, Jung-Hoon

    2017-09-15

    Microwave-assisted extraction (MAE), an efficient extraction tool, was employed to extract a coumarin and five phenylpropanoids (cinnamic acid, cinnamyl alcohol, cinnamaldehyde, 2-hydroxycinnamadehyde, and 2-methoxycinnamaldehyde) from Cinnamomum cassia bark using water as the extraction solvent. Six marker compounds were quantified by high-performance liquid chromatography-diode array detector using a validated analytical method. To investigate the influences of temperature and time on the extraction yields of the six marker compounds, the water extracts of C. cassia bark were prepared using a MAE method at six different extraction temperatures (70, 75, 80, 85, 90, and 95°C) and times (2, 4, 6, 8, 10, and 12min). Their influences were assessed by multiple regression analysis. The results obtained demonstrated that higher extraction temperature and longer extraction time positively affected coumarin and cinnamyl alcohol contents, but negatively affected extract contents of cinnamic acid, cinnamaldehyde and 2-hydroxycinnamaldehyde (all p-extraction of 2-methoxycinnamaldehyde was affected by both positively and negatively by increasing temperature and time. These changes during MAE were assumed by the chemical natures of the marker compounds with various functional groups. In conclusion, temperature and times significantly affected the extraction efficiencies of a coumarin and five phenylpropanoids from C. cassia bark when a water-based MAE method was used. This study provides a novel approach to the preparation of the water extract of C. cassia bark using MAE. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. Sequential chemical extraction for a phosphogypsum environmental impact evaluation

    Science.gov (United States)

    Gennari, R. F.; Garcia, I.; Medina, N. H.; Silveira, M. A. G.

    2013-05-01

    Phosphogypsum (PG) is gypsum generated during phosphoric acid production. PG is stocked in large stacks or accumulated in lakes; it contains heavy metals and naturally occurring radioactive elements. The metal contamination may affect the functionality, sustainability and biodiversity of ecosystems. In this work, PG samples were analyzed by Plasma Spectrometry. Total metal content and in the extractable fraction of chemical elements were determined. For K, Ni, Zn, Cr, Cd, Ba, Pb and U, the results obtained are lower than those obtained in a Idaho plant are including and also lower than those found in the soil, indicating this PG sample analyzed probably will not cause any additional metal neither natural radiation contamination.

  16. Influence of extraction method on protein profile of soybeans

    OpenAIRE

    Pavlićević Milica Ž.; Stanojević Slađana P.; Vucelić-Radović Biljana V.

    2013-01-01

    Comparison between protein profiles of soybean obtained by commonly used methods of extraction (Tris buffer and Tris-urea buffer) with methods used for extraction of plant proteins for 2D PAGE analysis (direct solubilization in IEF buffer, acetone extraction, phenol extraction, extraction with urea solubilization buffer and thiourea-urea extraction) was investigated. 2D profiles of samples extracted directly in IEF buffer, in urea solubilization buffer and in acetone were characterized ...

  17. [Analysis of the chemical constituents of volatile oil from the Folium Rhododendri Daurici by supercritical CO2 extraction].

    Science.gov (United States)

    Jiao, Shu-qing; Liu, Feng-hua

    2009-02-01

    To compare the chemical constituents of volatile oils from Folium Rhododendri Daurici between supercritical CO2 extraction (SCE-CO2) and steam distillation (SD). The chemical constituents of volatile oils obtained by two methods were analyzed by GC-MS. 52 compounds in the volatile oil extracted by SCE-CO2 and 48 compounds in the volatile oil extracted by SD were separated and identified separately. There were 45 same components. The chemical constituents obtained by SCE-CO2 and SD are approached.

  18. Spectroscopic Chemical Analysis Methods and Apparatus

    Science.gov (United States)

    Hug, William F. (Inventor); Reid, Ray D. (Inventor); Bhartia, Rohit (Inventor); Lane, Arthur L. (Inventor)

    2017-01-01

    Spectroscopic chemical analysis methods and apparatus are disclosed which employ deep ultraviolet (e.g. in the 200 nm to 300 nm spectral range) electron beam pumped wide bandgap semiconductor lasers, incoherent wide bandgap semiconductor light emitting devices, and hollow cathode metal ion lasers to perform non-contact, non-invasive detection of unknown chemical analytes. These deep ultraviolet sources enable dramatic size, weight and power consumption reductions of chemical analysis instruments. In some embodiments, Raman spectroscopic detection methods and apparatus use ultra-narrow-band angle tuning filters, acousto-optic tuning filters, and temperature tuned filters to enable ultra-miniature analyzers for chemical identification. In some embodiments Raman analysis is conducted along with photoluminescence spectroscopy (i.e. fluorescence and/or phosphorescence spectroscopy) to provide high levels of sensitivity and specificity in the same instrument.

  19. Method for extracting bioinsecticide deriv atives from the plant artemisia absinthium L

    OpenAIRE

    González-Coloma, Azucena; Burillo Alquézar, Jesús; Urieta Navarro, José Antonio; Sanz Perucha, Jesús; Díaz, Carmen E.; Fraga González, Manuel; Reina, Matías; Cabrera, Raimundo; Martínez Díaz, Rafael; Mainar Fernández, Ana M

    2010-01-01

    [EN] The invention relates to a method for the extraction of bioinsecticide derivatives from the plant Artemisia absinthimn L, characterised by agronomic and economic parameters relating to the organic production ofthe plant with a specific chemotype in order to produce organic extracts consisting of essential oil and a non-volatile extract, and in another phase supercritical extracts of characterised chemical composition, obtained with pressurised CO2 as the main solvent. The main industr...

  20. Critical assessment of extracellular polymeric substances extraction methods from mixed culture biomass

    DEFF Research Database (Denmark)

    Pellicer i Nàcher, Carles; Domingo Felez, Carlos; Mutlu, Ayten Gizem

    2013-01-01

    . This study presents a rigorous and critical assessment of existing physical and chemical EPS extraction methods applied to mixed-culture biomass samples (nitrifying, nitritation-anammox, and activated sludge biomass). A novel fluorescence-based method was developed and calibrated to quantify the lysis...... potential of different EPS extraction protocols. We concluded that commonly used methods to assess cell lysis (DNA concentrations or G6PDH activities in EPS extracts) do not correlate with cell viability. Furthermore, we discovered that the presence of certain chemicals in EPS extracts results in severe...... underestimation of protein and carbohydrate concentrations by using standard analytical methods. Keeping both maximum EPS extraction yields and minimal biomass lysis as criteria, it was identified a sonication-based extraction method as the best to determine and compare tightly-bound EPS fractions in different...

  1. On-matrix derivatization extraction of chemical weapons convention relevant alcohols from soil.

    Science.gov (United States)

    Chinthakindi, Sridhar; Purohit, Ajay; Singh, Varoon; Dubey, D K; Pardasani, Deepak

    2013-10-11

    Present study deals with the on-matrix derivatization-extraction of aminoalcohols and thiodiglycols, which are important precursors and/or degradation products of VX analogues and vesicants class of chemical warfare agents (CWAs). The method involved hexamethyldisilazane (HMDS) mediated in situ silylation of analytes on the soil. Subsequent extraction and gas chromatography-mass spectrometry analysis of derivatized analytes offered better recoveries in comparison to the procedure recommended by the Organization for the Prohibition of Chemical Weapons (OPCW). Various experimental conditions such as extraction solvent, reagent and catalyst amount, reaction time and temperature were optimized. Best recoveries of analytes ranging from 45% to 103% were obtained with DCM solvent containing 5%, v/v HMDS and 0.01%, w/v iodine as catalyst. The limits of detection (LOD) and limit of quantification (LOQ) with selected analytes ranged from 8 to 277 and 21 to 665ngmL(-1), respectively, in selected ion monitoring mode.

  2. Method for Extracting and Sequestering Carbon Dioxide

    Energy Technology Data Exchange (ETDEWEB)

    Rau, Gregory H.; Caldeira, Kenneth G.

    2005-05-10

    A method and apparatus to extract and sequester carbon dioxide (CO2) from a stream or volume of gas wherein said method and apparatus hydrates CO2, and reacts the resulting carbonic acid with carbonate. Suitable carbonates include, but are not limited to, carbonates of alkali metals and alkaline earth metals, preferably carbonates of calcium and magnesium. Waste products are metal cations and bicarbonate in solution or dehydrated metal salts, which when disposed of in a large body of water provide an effective way of sequestering CO2 from a gaseous environment.

  3. Characterization of anticancer, antimicrobial, antioxidant properties and chemical compositions of Peperomia pellucida leaf extract.

    Science.gov (United States)

    Wei, Lee Seong; Wee, Wendy; Siong, Julius Yong Fu; Syamsumir, Desy Fitrya

    2011-01-01

    Peperomia pellucida leaf extract was characterized for its anticancer, antimicrobial, antioxidant activities, and chemical compositions. Anticancer activity of P. pellucida leaf extract was determined through Colorimetric MTT (tetrazolium) assay against human breast adenocarcinoma (MCF-7) cell line and the antimicrobial property of the plant extract was revealed by using two-fold broth micro-dilution method against 10 bacterial isolates. Antioxidant activity of the plant extract was then characterized using α, α-diphenyl-β-picrylhydrazyl (DPPH) radical scavenging method and the chemical compositions were screened and identified using gas chromatography-mass spectrometry (GC-MS). The results of present study indicated that P. pellucida leaf extract possessed anticancer activities with half maximal inhibitory concentration (IC(50)) of 10.4 ± 0.06 µg/ml. The minimum inhibitory concentration (MIC) values were ranged from 31.25 to 125 mg/l in which the plant extract was found to inhibit the growth of Edwardsiella tarda, Escherichia coli, Flavobacterium sp., Pseudomonas aeruginosa and Vibrio cholerae at 31.25 mg/l; Klebsiella sp., Aeromonas hydrophila and Vibrio alginolyticus at 62.5 mg/l; and it was able to control the growth of Salmonella sp. and Vibrio parahaemolyticus at 125 mg/l. At the concentration of 0.625 ppt, the plant extract was found to inhibit 30% of DPPH, free radical. Phytol (37.88%) was the major compound in the plant extract followed by 2-Naphthalenol, decahydro- (26.20%), Hexadecanoic acid, methyl ester (18.31%) and 9,12-Octadecadienoic acid (Z,Z)-, methyl ester (17.61%). Findings from this study indicated that methanol extract of P. pellucida leaf possessed vast potential as medicinal drug especially in breast cancer treatment.

  4. Characterization of Anticancer, Antimicrobial, Antioxidant Properties and Chemical Compositions of Peperomia Pellucida Leaf Extract

    Directory of Open Access Journals (Sweden)

    Desy Fitrya Syamsumir

    2011-10-01

    Full Text Available Peperomia pellucida leaf extract was characterized for its anticancer, antimicrobial, antioxidant activities, and chemical compositions. Anticancer activity of P. pellucida leaf extract was determined through Colorimetric MTT (tetrazolium assay against human breast adenocarcinoma (MCF-7 cell line and the antimicrobial property of the plant extract was revealed by using two-fold broth micro-dilution method against 10 bacterial isolates. Antioxidant activity of the plant extract was then characterized using α, α-diphenyl-β-picrylhydrazyl (DPPH radical scavenging method and the chemical compositions were screened and identified using gas chromatography-mass spectrometry (GC-MS. The results of present study indicated that P. pellucida leaf extract possessed anticancer activities with half maximal inhibitory concentration (IC50 of 10.4±0.06 µg/ml. The minimum inhibitory concentration (MIC values were ranged from 31.25 to 125 mg/l in which the plant extract was found to inhibit the growth of Edwardsiella tarda, Escherichia coli, Flavobacterium sp., Pseudomonas aeruginosa and Vibrio cholerae at 31.25 mg/l; Klebsiella sp., Aeromonas hydrophila and Vibrio alginolyticus at 62.5 mg/l; and it was able to control the growth of Salmonella sp. and Vibrio parahaemolyticus at 125 mg/l. At the concentration of 0.625 ppt, the plant extract was found to inhibit 30% of DPPH, free radical. Phytol (37.88% was the major compound in the plant extract followed by 2-Naphthalenol, decahydro- (26.20%, Hexadecanoic acid, methyl ester (18.31% and 9,12-Octadecadienoic acid (Z,Z-, methyl ester (17.61%. Findings from this study indicated that methanol extract of P. pellucida leaf possessed vast potential as medicinal drug especially in breast cancer treatment.

  5. [Extraction and analysis of chemical components of essential oil in Thymus vulgaris of tissue culture].

    Science.gov (United States)

    Li, Xiao-Dong; Yang, Li; Xu, Shi-Qian; Li, Jian-Guo; Cheng, Zhi-Hui; Dang, Jian-Zhang

    2011-10-01

    To extract the essential oils from the Seedlings, the Aseptic Seedlings and the Tissue Culture Seedlings of Thymus vulgaris and analyze their chemical components and the relative contents. The essential oils were extracted by steam distillation, the chemical components and the relative contents were identified and analyzed by gas chromatography-mass spectrometry (GC/MS) and peak area normalization method. The main chemical components of essential oil in these three samples had no significant difference, they all contained the main components of essential oil in Thymus vulgaris: Thymol, Carvacrol, o-Cymene, gamma-Terpinene, Caryophyllene et al. and only had a slight difference in the relative content. This study provides important theoretical foundation and data reference for further study on production of essential oil in thyme by tissue culture technology.

  6. Physical and chemical properties of olive oil extracted from olive cultivars grown in Shiraz and Kazeroon

    DEFF Research Database (Denmark)

    Homapour, M.; Hamedi, M.; Moslehishad, M.

    2014-01-01

    Background and objective: The composition of olive oil is significantly affected by the cultivar and climatic conditions. The present study determined the chemical characteristics of olive oil extracted from two major Iranian varieties of olive (yellow and local oil-grade) in Shiraz and Kazeroon......, two major olive-producing areas in Fars province. Materials and methods: The composition of olive oil is significantly affected by the cultivar and climatic conditions. The present study determined the chemical characteristics of olive oil extracted from two major Iranian varieties of olive (yellow...... and local oil-grade) in Shiraz and Kazeroon, two major olive-producing areas in Fars province. Results: The results showed that the physical and chemical properties of both cultivars are in accordance with national and international standards. There was a significant difference in acidity, iodine content...

  7. [Component analysis and acute hepatotoxicity of volatile oils from argy wormwood leaf extracted by different methods].

    Science.gov (United States)

    Liu, Hongjie; Bai, Yang; Hong, Yanlong; Zhang, Xun

    2010-06-01

    To analyze the chemical composition and compare acute hepatotoxicity of essential oils extracted from argy wormwood leaf in Guangdong by four different methods. Four extraction methods, including hydrodistillation extraction, supercritical fluid CO2 extraction, petroleum ether ultrasonic extraction and petroleum ether microwave extraction, were employed to prepare essential oil from argy wormwood leaf in Guangdong. The products were analyzed qualitatively and quantitatively using GC-MS and GC-FID. Sixty mice were divided into 5 groups according to different essential oils and took the same dose orally, then after 5 hours, hepatic functional parameters in serum were detected such as alanine aminotransferase (ALT) and so on, and morphologic change of hepatic tissues was observed. The extraction rate of the four methods and identified compounds was 1.02%, 80 (hydrodistillation extraction), 2.46%, 56 (supercritical fluid CO2 extraction), 3.17%, 45 (petroleum ether ultrasonic extraction) and 3.32%, 78 (petroleum ether microwave extraction) respectively. Totally 153 compounds were identified from those essential oils. Compared with that of the control group, some hepatic functional parameters of hydrodistillation and supercritical fluid CO2 extraction groups rose significantly (P extracted from argy wormwood leaf by different methods may have not only different chemical composition, but also different acute hepatotoxicity, and monoterpenes and benzenes in the essential oils might induce acute hepatotoxicity.

  8. A comparative study: the impact of different lipid extraction methods on current microalgal lipid research.

    Science.gov (United States)

    Li, Yan; Ghasemi Naghdi, Forough; Garg, Sourabh; Adarme-Vega, Tania Catalina; Thurecht, Kristofer J; Ghafor, Wael Abdul; Tannock, Simon; Schenk, Peer M

    2014-01-24

    Microalgae cells have the potential to rapidly accumulate lipids, such as triacylglycerides that contain fatty acids important for high value fatty acids (e.g., EPA and DHA) and/or biodiesel production. However, lipid extraction methods for microalgae cells are not well established, and there is currently no standard extraction method for the determination of the fatty acid content of microalgae. This has caused a few problems in microlagal biofuel research due to the bias derived from different extraction methods. Therefore, this study used several extraction methods for fatty acid analysis on marine microalga Tetraselmis sp. M8, aiming to assess the potential impact of different extractions on current microalgal lipid research. These methods included classical Bligh & Dyer lipid extraction, two other chemical extractions using different solvents and sonication, direct saponification and supercritical CO₂ extraction. Soxhlet-based extraction was used to weigh out the importance of solvent polarity in the algal oil extraction. Coupled with GC/MS, a Thermogravimetric Analyser was used to improve the quantification of microalgal lipid extractions. Among these extractions, significant differences were observed in both, extract yield and fatty acid composition. The supercritical extraction technique stood out most for effective extraction of microalgal lipids, especially for long chain unsaturated fatty acids. The results highlight the necessity for comparative analyses of microalgae fatty acids and careful choice and validation of analytical methodology in microalgal lipid research.

  9. Method And Apparatus For Detecting Chemical Binding

    Energy Technology Data Exchange (ETDEWEB)

    Warner, Benjamin P. (Los Alamos, NM); Havrilla, George J. (Los Alamos, NM); Miller, Thomasin C. (Los Alamos, NM); Wells, Cyndi A. (Los Alamos, NM)

    2005-02-22

    The method for screening binding between a target binder and potential pharmaceutical chemicals involves sending a solution (preferably an aqueous solution) of the target binder through a conduit to a size exclusion filter, the target binder being too large to pass through the size exclusion filter, and then sending a solution of one or more potential pharmaceutical chemicals (preferably an aqueous solution) through the same conduit to the size exclusion filter after target binder has collected on the filter. The potential pharmaceutical chemicals are small enough to pass through the filter. Afterwards, x-rays are sent from an x-ray source to the size exclusion filter, and if the potential pharmaceutical chemicals form a complex with the target binder, the complex produces an x-ray fluorescence signal having an intensity that indicates that a complex has formed.

  10. Method and apparatus for detecting chemical binding

    Energy Technology Data Exchange (ETDEWEB)

    Warner, Benjamin P. (Los Alamos, NM); Havrilla, George J. (Los Alamos, NM); Miller, Thomasin C. (Los Alamos, NM); Wells, Cyndi A. (Los Alamos, NM)

    2007-07-10

    The method for screening binding between a target binder and potential pharmaceutical chemicals involves sending a solution (preferably an aqueous solution) of the target binder through a conduit to a size exclusion filter, the target binder being too large to pass through the size exclusion filter, and then sending a solution of one or more potential pharmaceutical chemicals (preferably an aqueous solution) through the same conduit to the size exclusion filter after target binder has collected on the filter. The potential pharmaceutical chemicals are small enough to pass through the filter. Afterwards, x-rays are sent from an x-ray source to the size exclusion filter, and if the potential pharmaceutical chemicals form a complex with the target binder, the complex produces an x-ray fluorescence signal having an intensity that indicates that a complex has formed.

  11. A cell extraction method for oily sediments

    Directory of Open Access Journals (Sweden)

    Michael eLappé

    2011-11-01

    Full Text Available Hydrocarbons can be found in many different habitats and represent an important carbon source for microbes. As fossil fuels, they are also an important economical resource, through natural seepage or accidental release they can also be major pollutants. DNA-specific stains and molecular probes bind to hydrocarbons, causing massive background fluorescence and thereby hampering cell enumeration. The cell extraction procedure of Kallmeyer et al. (2008 separates the cells from the sediment matrix. In principle, this technique can also be used to separate cells from oily sediments, but it is not optimized for this application.Here we present a modified extraction method in which the hydrocarbons are removed prior to cell extraction. Due to the reduced background fluorescence the microscopic image becomes clearer, making cell identification and enumeration much easier. Consequently, the resulting cell counts from samples treated according to our new protocol are significantly higher than those treated according to Kallmeyer et al. (2008. We tested different amounts of a variety of solvents for their ability to remove hydrocarbons and found that n-hexane and – in samples containing more biodegraded oils – methanol, delivered the best results. However, as solvents also tend to lyse cells, it was important to find the optimum solvent to sample ratio, at which hydrocarbon extraction is maximised and cell lysis minimized. A ratio between slurry and solvent of 1:2 to 1:5 delivered the highest cell counts without lysing too many cells. The method provided reproducibly good results on samples from very different environments, both marine and terrestrial.

  12. Chemical constituents and antihistamine activity of Bixa orellana leaf extract

    Directory of Open Access Journals (Sweden)

    Yong Yoke Keong

    2013-02-01

    Full Text Available Abstract Background Bixa orellana L. has been traditionally used in Central and South America to treat a number of ailments, including internal inflammation, and in other tropical countries like Malaysia as treatment for gastric ulcers and stomach discomfort. The current study aimed to determine the major chemical constituents of the aqueous extract of B. orellana (AEBO and to evaluate the antihistamine activity of AEBO during acute inflammation induced in rats. Methods Acute inflammation was produced by subplantar injection of 0.1 mL of 0.1% histamine into the right hind paw of each rat in the control and treatment groups. The degree of edema was measured before injection and at the time points of 30, 60, 120, 180, 240 and 300 min after injection. Changes of peritoneal vascular permeability were studied using Evans blue dye as a detector. Vascular permeability was evaluated by the amount of dye leakage into the peritoneal cavity in rats. To evaluate the inhibitory effect of AEBO on biochemical mediators of vascular permeability, the levels of nitric oxide (NO and vascular endothelial growth factor (VEGF were determined in histamine-treated paw tissues. The major constituents of AEBO were determined by gas chromatography–mass spectrometry (GC-MS analysis. Results AEBO produced a significant inhibition of histamine-induced paw edema starting at 60 min time point, with maximal percentage of inhibition (60.25% achieved with a dose of 150 mg/kg of AEBO at 60 min time point. Up to 99% of increased peritoneal vascular permeability produced by histamine was successfully suppressed by AEBO. The expression of biochemical mediators of vascular permeability, NO and VEGF, was also found to be downregulated in the AEBO treated group. Gas chromatography–mass spectrometry (GC-MS analysis revealed that the major constituent in AEBO was acetic acid. Conclusions The experimental findings demonstrated that the anti-inflammatory activity of AEBO was

  13. Chemical composition and antimicrobial action of the ethanol extracts of Salvia pratensis L., Salvia glutinosa L. and Salvia aethiopis L.

    Directory of Open Access Journals (Sweden)

    ANA S. VELICKOVIC

    2002-10-01

    Full Text Available In this paper the chemical composition and antimicrobial action of the extracts from the flower, leaf and stem of Salvia pratensis L., Salvia glutinosa L. and Salvia aethiopis L. were investigated. The investigated extracts mostly contain monoterpenes to a high degree, except the flower extract of S. pratensis and the leaf extract of S. glutinosa where sesquiterpenes were found in great amounts. Diterpenes were found only in the extracts of S. aethiopis. All these extracts contained 1,8-cineole (to the highest degree (19.1 % in the stem extract of S. glutinosa and beta-caryophyllene (to the highest degree (7.0 % in the flower extract of S. pratensis. The antimicrobial activities of the extracts were determined by the diffusion and dilution method.

  14. New methods for chemical protein synthesis.

    Science.gov (United States)

    Guan, Xiaoyang; Chaffey, Patrick K; Zeng, Chen; Tan, Zhongping

    2015-01-01

    Chemical protein synthesis is a useful tool to generate pure proteins which are otherwise difficult to obtain in sufficient amounts for structure and property analysis. Additionally, because of the precise and flexible nature of chemical synthesis, it allows for controllable variation of protein sequences, which is valuable for understanding the relationships between protein structure and function. Despite the usefulness of chemical protein synthesis, it has not been widely adopted as a tool for protein characterization, mainly because of the lack of general and efficient methods for the preparation and coupling of peptide fragments and for the folding of polypeptide chains. To address these issues, many new methods have recently been developed in the areas of solid-phase peptide synthesis, peptide fragment assembly, and protein folding. Here we review these recent technological advances and highlight the gaps needing to be addressed in future research.

  15. A cell extraction method for oily sediments

    Science.gov (United States)

    Lappé, M.; Kallmeyer, J.

    2012-04-01

    Hydrocarbons can be found in many different habitats and represent an important carbon source for microbes. As fossil fuels, they are an important economical resource and, through natural seepage or accidental release, they can be major pollutants. Oil sands from Alberta, Canada, and samples from the seafloor of the Gulf of Mexico represent typical examples of either natural or anthropogenically affected oily sediments. DNA-specific stains and molecular probes bind to hydrocarbons, causing massive background fluorescence and thereby massively hampering cell enumeration. The cell extraction procedure of Kallmeyer et al. (2008) separates the cells from the sediment matrix, producing a sediment free cell extract that can then be used for subsequent staining and cell enumeration under a fluorescence microscope. In principle, this technique can also be used to separate cells from oily sediments, but it was not originally optimized for this application and does not provide satisfactory results. Here we present a modified extraction method in which the hydrocarbons are removed prior to cell extraction by a solvent treatment. Due to the reduced background fluorescence the microscopic image becomes clearer, making cell identification and enumeration much easier. Consequently, the resulting cell counts from oily samples treated according to our new protocol were significantly higher than those treated according to Kallmeyer et al. (2008). We tested different amounts of a variety of solvents for their ability to remove hydrocarbons and found that n-hexane and - in samples containing more biodegraded oils - methanol, delivered the best results. Because solvents also tend to lyse cells, it was important to find the optimum solvent to sample ratio, at which the positive effect of hydrocarbon extraction overcomes the negative effect of cell lysis. A volumetric ratio of 1:2 to 1:5 between a formalin-fixed sediment slurry and solvent delivered highest cell counts. Extraction

  16. Chemical Characterization of Different Sumac and Pomegranate Extracts Effective against Botrytis cinerea Rots.

    Science.gov (United States)

    Romeo, Flora V; Ballistreri, Gabriele; Fabroni, Simona; Pangallo, Sonia; Nicosia, Maria Giulia Li Destri; Schena, Leonardo; Rapisarda, Paolo

    2015-06-30

    Pomegranate (Punica granatum L.) peel and sumac (Rhus coriaria L.) fruit and leaf extracts were chemically characterized and their ability to inhibit table grape (cv. Italia) rots caused by Botrytis cinerea was evaluated on artificially inoculated berries. Different extraction methods were applied and extracts were characterized through Ultra Fast High Performance Liquid Chromatography coupled to Photodiode array detector and Electrospray ionization Mass spectrometer (UPLC-PDA-ESI/MSn) for their phenol and anthocyanin contents. The concentrated pomegranate peel extract (PGE-C) was the richest in phenols (66.97 g gallic acid equivalents/kg) while the concentrated sumac extract from fruits (SUF-C) showed the highest anthocyanin amount (171.96 mg cyanidin 3-glucoside equivalents/kg). Both phenolic and anthocyanin profile of pomegranate and sumac extracts were quite different: pomegranate extract was rich in cyanidin 3-glucoside, pelargonidin 3-glucoside and ellagic acid derivatives, while sumac extract was characterized by 7-methyl-cyanidin 3-galactoside and gallic acid derivatives. The concentrated extracts from both pomegranate peel and sumac leaves significantly reduced the development of Botrytis rots. In particular, the extract from pomegranate peel completely inhibited the pathogen at different intervals of time (0, 12, and 24 h) between treatment and pathogen inoculation on fruits maintained at 22-24 °C and high relative humidity (RH). This extract may represent a valuable alternative to control postharvest fungal rots in view of its high efficacy because of the low cost of pomegranate peel, which is a waste product of processing factories.

  17. Chemical Characterization of Different Sumac and Pomegranate Extracts Effective against Botrytis cinerea Rots

    Directory of Open Access Journals (Sweden)

    Flora V. Romeo

    2015-06-01

    Full Text Available Pomegranate (Punica granatum L. peel and sumac (Rhus coriaria L. fruit and leaf extracts were chemically characterized and their ability to inhibit table grape (cv. Italia rots caused by Botrytis cinerea was evaluated on artificially inoculated berries. Different extraction methods were applied and extracts were characterized through Ultra Fast High Performance Liquid Chromatography coupled to Photodiode array detector and Electrospray ionization Mass spectrometer (UPLC-PDA-ESI/MSn for their phenol and anthocyanin contents. The concentrated pomegranate peel extract (PGE-C was the richest in phenols (66.97 g gallic acid equivalents/kg while the concentrated sumac extract from fruits (SUF-C showed the highest anthocyanin amount (171.96 mg cyanidin 3-glucoside equivalents/kg. Both phenolic and anthocyanin profile of pomegranate and sumac extracts were quite different: pomegranate extract was rich in cyanidin 3-glucoside, pelargonidin 3-glucoside and ellagic acid derivatives, while sumac extract was characterized by 7-methyl-cyanidin 3-galactoside and gallic acid derivatives. The concentrated extracts from both pomegranate peel and sumac leaves significantly reduced the development of Botrytis rots. In particular, the extract from pomegranate peel completely inhibited the pathogen at different intervals of time (0, 12, and 24 h between treatment and pathogen inoculation on fruits maintained at 22–24 °C and high relative humidity (RH. This extract may represent a valuable alternative to control postharvest fungal rots in view of its high efficacy because of the low cost of pomegranate peel, which is a waste product of processing factories.

  18. The effect of temperature and extraction period of time on the chemicals content of emprit ginger ethanol extract (Zingiber officinale var. Rubrum)

    Science.gov (United States)

    Ratnaningrum, Diah; Endah, Een Sri; Pudjiraharti, Sri

    2017-01-01

    Research on extraction method of emprit ginger using ethanol with agitation of 100 rpm at different temperatures (ambient temperature, 40, and 50°C) and various extraction period of times (30, 60, and 90 minutes) was conducted. Analysis of chemicals content i.e. total phenolic and total flavonoid. The objective of this work was to study the effect of temperatures and extraction period of times on the chemicals content of its ethanol extract. Based on the results of the test, the highest content total flavonoid (5.17% w/w) was resulted at 40°C for 90 minutes, while the total phenolic content was not affected by either temperature or extraction period of times used. The content of total phenolic was around 2.39% to 2.65% w/w.

  19. Computer-Aided (13)C NMR Chemical Profiling of Crude Natural Extracts without Fractionation.

    Science.gov (United States)

    Bakiri, Ali; Hubert, Jane; Reynaud, Romain; Lanthony, Sylvie; Harakat, Dominique; Renault, Jean-Hugues; Nuzillard, Jean-Marc

    2017-05-26

    A computer-aided, (13)C NMR-based dereplication method is presented for the chemical profiling of natural extracts without any fractionation. An algorithm was developed in order to compare the (13)C NMR chemical shifts obtained from a single routine spectrum with a set of predicted NMR data stored in a natural metabolite database. The algorithm evaluates the quality of the matching between experimental and predicted data by calculating a score function and returns the list of metabolites that are most likely to be present in the studied extract. The proof of principle of the method is demonstrated on a crude alkaloid extract obtained from the leaves of Peumus boldus, resulting in the identification of eight alkaloids, including isocorydine, rogersine, boldine, reticuline, coclaurine, laurotetanine, N-methylcoclaurine, and norisocorydine, as well as three monoterpenes, namely, p-cymene, eucalyptol, and α-terpinene. The results were compared to those obtained with other methods, either involving a fractionation step before the chemical profiling process or using mass spectrometry detection in the infusion mode or coupled to gas chromatography.

  20. Bayesian methods of astronomical source extraction

    CERN Document Server

    Oliver, R S S S

    2005-01-01

    We present two new source extraction methods, based on the Bayesian statistical formalism. The first is a source detection filter, able to simultaneously detect point sources and estimate the image background. The second is an advanced photometry technique, which measures the flux, position (to sub-pixel accuracy), local background and point spread function of a previously-detected source. In both cases, we use the Bayesian Information Criterion (BIC) to compare the relative likelihood of different models. We apply the source detection filter to simulated Herschel-SPIRE data and show the filter's ability to both detect point sources and also simultaneously estimate the image background. We use the photometry method to analyse a simple simulated image containing a source of unknown flux, position and point spread function; we not only accurately measure these parameters, but also determine their uncertainties (using Markov-Chain Monte Carlo sampling). We also characterise the nature of the source (for example,...

  1. An effective placental cotyledons proteins extraction method for 2D gel electrophoresis.

    Science.gov (United States)

    Tan, Niu J; Daim, Leona D J; Jamil, Amilia A M; Mohtarrudin, Norhafizah; Thilakavathy, Karuppiah

    2017-03-01

    Effective protein extraction is essential especially in producing a well-resolved proteome on 2D gels. A well-resolved placental cotyledon proteome, with good reproducibility, have allowed researchers to study the proteins underlying the physiology and pathophysiology of pregnancy. The aim of this study is to determine the best protein extraction protocol for the extraction of protein from placental cotyledons tissues for a two-dimensional gel electrophoresis (2D-GE). Based on widely used protein extraction strategies, 12 different extraction methodologies were carefully selected, which included one chemical extraction, two mechanical extraction coupled protein precipitations, and nine chemical extraction coupled protein precipitations. Extracted proteins were resolved in a one-dimensional gel electrophoresis and 2D-GE; then, it was compared with set criteria: extraction efficacy, protein resolution, reproducibility, and recovery efficiency. Our results revealed that a better profile was obtained by chemical extraction in comparison to mechanical extraction. We further compared chemical extraction coupled protein precipitation methodologies, where the DNase/lithium chloride-dense sucrose homogenization coupled dichloromethane-methanol precipitation (DNase/LiCl-DSH-D/MPE) method showed good protein extraction efficiency. This, however, was carried out with the best protein resolution and proteome reproducibility on 2D-gels. DNase/LiCl-DSH-D/MPE was efficient in the extraction of proteins from placental cotyledons tissues. In addition, this methodology could hypothetically allow the protein extraction of any tissue that contains highly abundant lipid and glycogen. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  2. Insect lipid profile: aqueous versus organic solvent-based extraction methods

    NARCIS (Netherlands)

    Tzompa Sosa, D.A.; Yi, L.; Valenberg, van H.J.F.; Boekel, van M.A.J.S.; Lakemond, C.M.M.

    2014-01-01

    In view of future expected industrial bio-fractionation of insects, we investigated the influence of extraction methods on chemical characteristics of insect lipids. Lipids from Tenebrio molitor, Alphitobius diaperinus, Acheta domesticus and Blaptica dubia, reared in the Netherlands, were extracted

  3. Preparing silica aerogel monoliths via a rapid supercritical extraction method.

    Science.gov (United States)

    Carroll, Mary K; Anderson, Ann M; Gorka, Caroline A

    2014-02-28

    A procedure for the fabrication of monolithic silica aerogels in eight hours or less via a rapid supercritical extraction process is described. The procedure requires 15-20 min of preparation time, during which a liquid precursor mixture is prepared and poured into wells of a metal mold that is placed between the platens of a hydraulic hot press, followed by several hours of processing within the hot press. The precursor solution consists of a 1.0:12.0:3.6:3.5 x 10(-3) molar ratio of tetramethylorthosilicate (TMOS):methanol:water:ammonia. In each well of the mold, a porous silica sol-gel matrix forms. As the temperature of the mold and its contents is increased, the pressure within the mold rises. After the temperature/pressure conditions surpass the supercritical point for the solvent within the pores of the matrix (in this case, a methanol/water mixture), the supercritical fluid is released, and monolithic aerogel remains within the wells of the mold. With the mold used in this procedure, cylindrical monoliths of 2.2 cm diameter and 1.9 cm height are produced. Aerogels formed by this rapid method have comparable properties (low bulk and skeletal density, high surface area, mesoporous morphology) to those prepared by other methods that involve either additional reaction steps or solvent extractions (lengthier processes that generate more chemical waste).The rapid supercritical extraction method can also be applied to the fabrication of aerogels based on other precursor recipes.

  4. Chemical composition of volatiles in Sardinian myrtle (Myrtus communis L.) alcoholic extracts and essential oils.

    Science.gov (United States)

    Tuberoso, Carlo I G; Barra, Andrea; Angioni, Alberto; Sarritzu, Erika; Pirisi, Filippo M

    2006-02-22

    The chemical composition of the volatile fraction of myrtle (Myrtus communis L.) alcoholic extracts and essential oils from leaves and berries collected in different places in Sardinia (Italy) was studied. A simple and rapid liquid-liquid extraction method was used to isolate volatile compounds from myrtle alcoholic extracts followed by GC and GC-MS analysis allowing the detection of 24 compounds. The volatile fraction was characterized by the terpenes fraction corresponding to that of the essential oils and by a fatty acid ethyl esters fraction. The variation during extraction of the volatile fraction in alcoholic extracts of berries and leaves was evaluated. Essential oils were obtained by hydrodistillation, and the yields were on average 0.52 +/- 0.03% (v/w dried weight) and 0.02 +/- 0.00% for leaves and berries, respectively. The essential oils were analyzed by GC and GC-MS, and a total of 27 components were detected, accounting for 90.6-98.7% of the total essential oil composition. Strong chemical variability depending on the origin of the samples was observed. The major compounds in the essential oils were alpha-pinene (30.0 and 28.5%), 1,8-cineole (28.8 and 15.3%), and limonene (17.5 and 24.1%) in leaves and berries, respectively, and were characterized by the lack of myrtenyl acetate.

  5. Chemical Extraction Preparation of Delithiated Cathode Materials of Li-ion Battery

    Institute of Scientific and Technical Information of China (English)

    YAN Shijian; ZHANG Mingang; CHAI Yuesheng; TIAN Wenhuai

    2009-01-01

    A method of conventional chemical reaction to prepare delithiated cathode materials of Li-ion battery was introduced.The cathode material of Li-ion battery was mixed with oxidizing agent Na_2S_2O_8 in water solution,and the solution was stirred continuously to make the chemical re-action proceed sufficiently,then the reaction product was filtered and finally the insoluble delithiated cathode material was obtained.A series of tests were conducted to verify the composition,crystal structure and electrochemical property of the delithiated cathode materials were all desirable.This method overcomes the shortcomings of battery charging preparation and chemical extraction prepa-ration employing other oxidizing agents.

  6. Supercritical CO2 extract and essential oil of bay (Laurus nobilis L.) – chemical composition and antibacterial activity

    OpenAIRE

    2010-01-01

    The present study deals with the supercritical carbon dioxide (SC-CO2) extraction and hydrodistillation (HD) of dried bay leaves (Laurus nobilis L.). The chemical composition and antibacterial activity of the SC-CO2 extract and essential oil (EO) from dried leaves of bay were compared to each other and literature data. Qualitative and quantitative analyses of the SC-CO2 extract and EO were performed using GC–FID and GC–MS analytical methods. A significant difference in the chemical compositio...

  7. Screening of herbal extracts influencing hematopoiesis and their chemical genetic effects in embryonic zebrafish

    Institute of Scientific and Technical Information of China (English)

    Rajaretinam Rajesh Kannan; Samuel Gnana Prakash Vincent

    2012-01-01

    Objective: To screen the herbal extracts influencing the hematopoietic stem cells (HSC) in zebrafish embryos and their chemical genetic effects. Methods: The herbals used in this study had been widely applicable in Siddha medicines in South India. Herbal extracts were treated in zebrafish embryos at 4 d post fertilization and the extracts inducing the HSC were enumerated in hemocytometer. The biocompatibility and the organogenesis of the screened extracts were assessed in the zebrafish embryos for their chemical genetic effects. The LC50 values were calculated with their parallel control. The blood cells were enumerated. Results: The level of RBC was found increased in the Bergera koenigii (B. koenigii) at 15 μg/mL (P<0.05), Mimosa pudica (M. pudica) at 20 μg/mL (P<0.05) and Solanum trilobatum (S. trilobatum) at 25 μg/mL (P<0.05) and decreased RBC level was found in Phyllanthus niruri (P. niruri) at 30 μg/mL (P<0.05). The WBC count was found increased in S. trilobatum at 20 μg/mL (P<0.05) and Annona muricata (Annona muricata) at 15 μg/mL (P<0.05) and the Vitis quadrangularis (V. quadrangularis) at 20 μg/mL (P<0.05) decreased the WBC level. There were no notable effects in heart beats and the chemical genetic effects were observed at higher concentration of the extract resulting in Pericardial bulging, trunk tail flexure with heart edema, fin fold deformities etc. Conclusions: This in vivo based screening of Hematopoiesis is an inexpensive assay to screen herbal compounds and found that S. trilobatum extract influenced embryonic HSC in zebrafish, which could be a therapeutic for blood related disorders.

  8. Physical and chemical properties of olive oil extracted from olive cultivars grown in Shiraz and Kazeroon

    DEFF Research Database (Denmark)

    Homapour, M.; Hamedi, M.; Moslehishad, M.

    2014-01-01

    Background and objective: The composition of olive oil is significantly affected by the cultivar and climatic conditions. The present study determined the chemical characteristics of olive oil extracted from two major Iranian varieties of olive (yellow and local oil-grade) in Shiraz and Kazeroon......, two major olive-producing areas in Fars province. Materials and methods: The composition of olive oil is significantly affected by the cultivar and climatic conditions. The present study determined the chemical characteristics of olive oil extracted from two major Iranian varieties of olive (yellow....... These results indicate that the quality of the olive oil depends both on the olive cultivar and geographical region. Keywords: Olive oil, Yellow cultivar, Oil-grade cultivar, Shiraz, Kazeroon...

  9. Numerical Methods For Chemically Reacting Flows

    Science.gov (United States)

    Leveque, R. J.; Yee, H. C.

    1990-01-01

    Issues related to numerical stability, accuracy, and resolution discussed. Technical memorandum presents issues in numerical solution of hyperbolic conservation laws containing "stiff" (relatively large and rapidly changing) source terms. Such equations often used to represent chemically reacting flows. Usually solved by finite-difference numerical methods. Source terms generally necessitate use of small time and/or space steps to obtain sufficient resolution, especially at discontinuities, where incorrect mathematical modeling results in unphysical solutions.

  10. Green technology approach towards herbal extraction method

    Science.gov (United States)

    Mutalib, Tengku Nur Atiqah Tengku Ab; Hamzah, Zainab; Hashim, Othman; Mat, Hishamudin Che

    2015-05-01

    The aim of present study was to compare maceration method of selected herbs using green and non-green solvents. Water and d-limonene are a type of green solvents while non-green solvents are chloroform and ethanol. The selected herbs were Clinacanthus nutans leaf and stem, Orthosiphon stamineus leaf and stem, Sesbania grandiflora leaf, Pluchea indica leaf, Morinda citrifolia leaf and Citrus hystrix leaf. The extracts were compared with the determination of total phenolic content. Total phenols were analyzed using a spectrophotometric technique, based on Follin-ciocalteau reagent. Gallic acid was used as standard compound and the total phenols were expressed as mg/g gallic acid equivalent (GAE). The most suitable and effective solvent is water which produced highest total phenol contents compared to other solvents. Among the selected herbs, Orthosiphon stamineus leaves contain high total phenols at 9.087mg/g.

  11. Evaluation of DNA extraction methods of rumen microbial populations.

    Science.gov (United States)

    Villegas-Rivera, Gabriela; Vargas-Cabrera, Yevani; González-Silva, Napoleón; Aguilera-García, Florentino; Gutiérrez-Vázquez, Ernestina; Bravo-Patiño, Alejandro; Cajero-Juárez, Marcos; Baizabal-Aguirre, Víctor Manuel; Valdez-Alarcón, Juan José

    2013-02-01

    The dynamism of microbial populations in the rumen has been studied with molecular methods that analyze single nucleotide polymorphisms of ribosomal RNA gene fragments (rDNA). Therefore DNA of good quality is needed for this kind of analysis. In this work we report the evaluation of four DNA extraction protocols (mechanical lysis or chemical lysis with CTAB, ethylxanthogenate or DNAzol(®)) from ruminal fluid. The suitability of two of these protocols (mechanical lysis and DNAzol(®)) was tested on single-strand conformation polymorphism (SSCP) of rDNA of rumen microbial populations. DNAzol(®) was a simple method that rendered good integrity, yield and purity. With this method, subtle changes in protozoan populations were detected in young bulls fed with slightly different formulations of a supplement of multinutritional blocks of molasses and urea. Sequences related to Eudiplodinium maggi and a non-cultured Entodiniomorphid similar to Entodinium caudatum, were related to major fluctuating populations in an SSCP assay.

  12. Use of sequential chemical extractions to purify nuclear membrane proteins for proteomics identification.

    Science.gov (United States)

    Korfali, Nadia; Fairley, Elizabeth A L; Swanson, Selene K; Florens, Laurence; Schirmer, Eric C

    2009-01-01

    The nuclear envelope (NE) is a double membrane system that is both a part of the endoplasmic reticulum and part of the nucleus. As its constituent proteins tend to be highly complexed with nuclear and cytoplasmic components, it is notoriously difficult to purify. Two methods can reduce this difficulty for the identification of nuclear membrane proteins: comparison to contaminating membranes and chemical extractions to enrich for certain groups of proteins. The purification of nuclear envelopes and contaminating microsomal membranes is described here along with procedures for chemical extraction using salt and detergent, chaotropes, or alkaline solutions. Each extraction method enriches for different combinations of nuclear envelope proteins. Finally, we describe the analysis of these fractions with MudPIT, a proteomics methodology that avoids gel extraction of bands to facilitate identification of minor proteins and membrane proteins that do not resolve well on gels. Together these three approaches can significantly increase the output of proteomics studies aimed at identifying the protein complement of subcellular membrane systems.

  13. Extraction methods and food uses of a natural red colorant from dye sorghum.

    Science.gov (United States)

    Akogou, Folachodé Ug; Kayodé, Ap Polycarpe; den Besten, Heidy Mw; Linnemann, Anita R

    2017-06-10

    The interest in stable natural colorants for food applications continues to grow. A red pigment extracted from the leaf sheaths of a sorghum variety (Sorghum bicolor) with a high content of apigeninidin is widely used as a biocolorant in processed foods in West Africa. This study compared the colour and anthocyanin composition from traditional extraction methods to determine options for improvement and use of the red biocolorant from dye sorghum in the food sector. Sorghum biocolorant was commonly applied in fermented and heated foods. Traditional extraction methods predominantly differed in two aspects, namely the use of an alkaline rock salt (locally known as kanwu) and the temperature of the extraction water. Cool extraction using the alkaline ingredient was more efficient than hot alkaline and hot aqueous extractions in extracting anthocyanins. The apigeninidin content was three times higher in the cool and hot alkaline extracts than in the aqueous extract. Cool and hot alkaline extractions at pH 8-9 were the most efficient methods for extracting apigeninidin from dye sorghum leaf sheaths. Broader use of the sorghum biocolorant in foods requires further research on its effects on nutrient bioavailability and antioxidant activity. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  14. Biodiesel Production from Microalgae by Extraction – Transesterification Method

    Directory of Open Access Journals (Sweden)

    Nguyen Thi Phuong Thao

    2013-11-01

    Full Text Available The environmental impact of using petroleum fuels has led to a quest to find a suitable alternative fuel source. In this study, microalgae were explored as a highly potential feedstock to produce biodiesel fuel. Firstly, algal oil is extracted from algal biomass by using organic solvents (n–hexan.  Lipid is contained in microalgae up to 60% of their weight. Then, Biodiesel is created through a chemical reaction known as transesterification between algal oil and alcohol (methanol with strong acid (such as H2SO4 as the catalyst. The extraction – transesterification method resulted in a high biodiesel yield (10 % of algal biomass and high FAMEs content (5.2 % of algal biomass. Biodiesel production from microalgae was studied through experimental investigation of transesterification conditions such as reaction time, methanol to oil ration and catalyst dosage which are deemed to have main impact on reaction conversion efficiency. All the parameters which were characterized for purified biodiesel such as free glycerin, total glycerin, flash point, sulfur content were analyzed according to ASTM standardDoi: http://dx.doi.org/10.12777/wastech.1.1.6-9Citation:  Thao, N.T.P., Tin, N.T., and Thanh, B.X. 2013. Biodiesel Production from Microalgae by Extraction – Transesterification Method. Waste Technology 1(1:6-9. Doi: http://dx.doi.org/10.12777/wastech.1.1.6-9

  15. Chemical-free Extraction of Cotton Stalk Bark Fibers by Steam Flash Explosion

    Directory of Open Access Journals (Sweden)

    Xiuliang Hou

    2014-10-01

    Full Text Available Cotton stalk bark fibers (CSBF were extracted by steam flash explosion, completed within 0.09 s, and the extracted fibers were compared with those obtained by conventional alkaline treatment. Results indicate that the optimum steam pressure was 2.5 MPa when steaming time was set to 2 min for extracting CSBF. Under the optimized conditions, the obtained CSBF had a cellulose content of 72%, length of 48 mm, fineness of 45 dtex, crystallinity index of 68, moisture regain of 8%, water retention of 98%, and tensile strength of 2.4 cN/dtex, which were similar to results obtained by conventional alkaline treatment. Compared with bark of cotton stalks, CSBF had lower moisture regain and water retention, and higher onset decomposition temperature. The results show that moderate steam flash explosion is a chemical-free, quick, and effective method for exploring the industrial applications of bark of cotton stalks as natural cellulose fibers.

  16. CD-REST: a system for extracting chemical-induced disease relation in literature

    OpenAIRE

    Xu, Jun; Wu, Yonghui; Zhang, Yaoyun; Wang, Jingqi; Lee, Hee-jin; Xu, Hua

    2016-01-01

    Mining chemical-induced disease relations embedded in the vast biomedical literature could facilitate a wide range of computational biomedical applications, such as pharmacovigilance. The BioCreative V organized a Chemical Disease Relation (CDR) Track regarding chemical-induced disease relation extraction from biomedical literature in 2015. We participated in all subtasks of this challenge. In this article, we present our participation system Chemical Disease Relation Extraction SysTem (CD-RE...

  17. Evaluating chemical extraction techniques for the determination of uranium oxidation state in reduced aquifer sediments

    Science.gov (United States)

    Stoliker, Deborah L.; Campbell, Kate M.; Fox, Patricia M.; Singer, David M.; Kaviani, Nazila; Carey, Minna; Peck, Nicole E.; Barger, John R.; Kent, Douglas B.; Davis, James A.

    2013-01-01

    Extraction techniques utilizing high pH and (bi)carbonate concentrations were evaluated for their efficacy in determining the oxidation state of uranium (U) in reduced sediments collected from Rifle, CO. Differences in dissolved concentrations between oxic and anoxic extractions have been proposed as a means to quantify the U(VI) and U(IV) content of sediments. An additional step was added to anoxic extractions using a strong anion exchange resin to separate dissolved U(IV) and U(VI). X-ray spectroscopy showed that U(IV) in the sediments was present as polymerized precipitates similar to uraninite and/or less ordered U(IV), referred to as non-uraninite U(IV) species associated with biomass (NUSAB). Extractions of sediment containing both uraninite and NUSAB displayed higher dissolved uranium concentrations under oxic than anoxic conditions while extractions of sediment dominated by NUSAB resulted in identical dissolved U concentrations. Dissolved U(IV) was rapidly oxidized under anoxic conditions in all experiments. Uraninite reacted minimally under anoxic conditions but thermodynamic calculations show that its propensity to oxidize is sensitive to solution chemistry and sediment mineralogy. A universal method for quantification of U(IV) and U(VI) in sediments has not yet been developed but the chemical extractions, when combined with solid-phase characterization, have a narrow range of applicability for sediments without U(VI).

  18. Evaluating chemical extraction techniques for the determination of uranium oxidation state in reduced aquifer sediments.

    Science.gov (United States)

    Stoliker, Deborah L; Campbell, Kate M; Fox, Patricia M; Singer, David M; Kaviani, Nazila; Carey, Minna; Peck, Nicole E; Bargar, John R; Kent, Douglas B; Davis, James A

    2013-08-20

    Extraction techniques utilizing high pH and (bi)carbonate concentrations were evaluated for their efficacy in determining the oxidation state of uranium (U) in reduced sediments collected from Rifle, CO. Differences in dissolved concentrations between oxic and anoxic extractions have been proposed as a means to quantify the U(VI) and U(IV) content of sediments. An additional step was added to anoxic extractions using a strong anion exchange resin to separate dissolved U(IV) and U(VI). X-ray spectroscopy showed that U(IV) in the sediments was present as polymerized precipitates similar to uraninite and/or less ordered U(IV), referred to as non-uraninite U(IV) species associated with biomass (NUSAB). Extractions of sediment containing both uraninite and NUSAB displayed higher dissolved uranium concentrations under oxic than anoxic conditions while extractions of sediment dominated by NUSAB resulted in identical dissolved U concentrations. Dissolved U(IV) was rapidly oxidized under anoxic conditions in all experiments. Uraninite reacted minimally under anoxic conditions but thermodynamic calculations show that its propensity to oxidize is sensitive to solution chemistry and sediment mineralogy. A universal method for quantification of U(IV) and U(VI) in sediments has not yet been developed but the chemical extractions, when combined with solid-phase characterization, have a narrow range of applicability for sediments without U(VI).

  19. AN ANALYTICAL METHOD FOR CHEMICAL SPECIATION OF SELENIUM IN SOIL

    Directory of Open Access Journals (Sweden)

    Constantin Luca

    2010-10-01

    Full Text Available Selenium is an essential microelement, sometimes redoubtable, through its beneficial role - risk depending on its concentration in the food chain, at low dose is an important nutrient in the life of humans and animals, contrary at high doses, it becomes toxic. Selenium may be find itself in the environment (soil, sediment, water in many forms (oxidized, reduced, organometallic which determine their mobility and toxicity. Determination of chemical speciation (identification of different chemical forms provides much more complete information for a better understanding of the behavior and the potential impact on the environment. In this work we present the results of methodological research on the extraction of sequential forms of selenium in the soil and the coupling of analytical methods capable of identifying very small amounts of selenium in soils An efficient scheme of sequential extractions forms of selenium (SES consisting in atomic absorption spectrometry coupled with hydride generation (HGAAS has been developed into five experimental steps, detailed in the paper. This operational scheme has been applied to the analysis of chemical speciation in the following areas: the Bărăgan Plain and Central Dobrogea of Romania.

  20. Chemical composition of Artemisia annua L. leaves and antioxidant potential of extracts as a function of extraction solvents.

    Science.gov (United States)

    Iqbal, Shahid; Younas, Umer; Chan, Kim Wei; Zia-Ul-Haq, Muhammad; Ismail, Maznah

    2012-05-21

    This study was conducted to investigate the chemical and nutritional composition of Artemisia annua leaves in addition to determination of antioxidant potential of their extracts prepared in different solvents. Chemical composition was determined by quantifying fat, protein, carbohydrate, fiber, tocopherol, phytate, and tannin contents. Extraction of A. annua leaves, for antioxidant potential evaluation, was carried out using five solvents of different polarities, i.e., hexane, chloroform, ethyl acetate, methanol and water. Antioxidant potential was evaluated by estimating total phenolic (TPC), flavonoid (TFC) contents, ferric reducing antioxidant power (FRAP), Trolox equivalent antioxidant capacity (TEAC), DPPH radical scavenging activity and lipid peroxidation. Efficiency of different solvents was compared for the yield of antioxidant extracts from leaf samples and a clear variation was observed. The highest TPC, TFC, TEAC, DPPH radical scavenging and lowest lipid peroxidation were observed in MeOH extracts, whereas aqueous extract exhibited high ferric reducing antioxidant power; suggesting MeOH to be the most favorable extractant.

  1. EVALUATION OF GEOCHEMICAL QUALITY CONTROL IN DETERMINATION OF Mn IN SOILS USING A SEQUENTIAL CHEMICAL EXTRACTION

    Institute of Scientific and Technical Information of China (English)

    DONGDe-ming; FANGChun-sheng; 等

    2002-01-01

    Sequential chemical extraction procedure has been widely used to partition particulate trace metals into vari-ous fractions and to describe the distribution and the statue of trace metals in geo-environment.One sequential chemical extraction procedure was employed here to partition various fractions of Mn in soils.The experiment was designed with quality controlling concept in order to show sampling and analytical error.Experimental results obtained on duplicate analy-sis of all soil samples demonstrated that the precision was less than 10%(at 95% confidence level).The accuracy was estimated by comparing the accepted total concentration of Mn in standard reference materials (SRMs) with the measured sum of the individual fractions.The recovery of Mn from SRM1 and SRM2 was 94.1% and 98.4%,respectively.The detection limit,accuracy and precision of the sequential chemical extraction procedure were discussed in detailed.All the results suggest that the trueness of the analytical method is satisfactory.

  2. Extraction, chromatographic and mass spectrometric methods for lipid analysis.

    Science.gov (United States)

    Pati, Sumitra; Nie, Ben; Arnold, Robert D; Cummings, Brian S

    2016-05-01

    Lipids make up a diverse subset of biomolecules that are responsible for mediating a variety of structural and functional properties as well as modulating cellular functions such as trafficking, regulation of membrane proteins and subcellular compartmentalization. In particular, phospholipids are the main constituents of biological membranes and play major roles in cellular processes like transmembrane signaling and structural dynamics. The chemical and structural variety of lipids makes analysis using a single experimental approach quite challenging. Research in the field relies on the use of multiple techniques to detect and quantify components of cellular lipidomes as well as determine structural features and cellular organization. Understanding these features can allow researchers to elucidate the biochemical mechanisms by which lipid-lipid and/or lipid-protein interactions take place within the conditions of study. Herein, we provide an overview of essential methods for the examination of lipids, including extraction methods, chromatographic techniques and approaches for mass spectrometric analysis.

  3. Effects of Nidus Vespae extract and chemical fractions on the growth and acidogenicity of oral microorganisms.

    Science.gov (United States)

    Xiao, Jin; Liu, Yuan; Zuo, Yu Ling; Li, Ji Yao; Ye, Ling; Zhou, Xue Dong

    2006-09-01

    Nidus Vespae is the honeycomb of Polistes Olivaceous (De Geer), P. Japonicus Saussure, and Parapolybiavaria Fabricius. It is known to have a number of pharmacological effects, including antimicrobial, anti-inflammatory, anti-virus, anti-tumor and anesthetic properties. The present study evaluated the antimicrobial activity and acid inhibition properties of extracts and chemical fractions of Nidus Vespae. The raw material was first extracted using 95% ethanol/water. Subsequent fractions were prepared from this extract using cyclohexane/ethyl acetate, petroleum ether/ethyl acetate, and chloroform/methanol. For the antimicrobial activity assays, minimum inhibitory concentrations (MIC) and minimum bactericidal concentrations (MBC) were determined using the microdilution method. The chloroform/methanol (Chl/MeOH) fraction showed the highest antibacterial activities with a MIC of 8-16mg/ml and an MBC of 16-32mg/ml. In addition, the extract and chemical fractions of Nidus Vespae showed a remarkable capacity for inhibiting the acid production of common oral bacteria at sub-MIC concentrations. Sub-MIC levels of the petroleum ether/ethyl acetate fraction significantly inhibited acid production by Streptococcus mutans ATCC 25175. The significant antiacidogenic activity demonstrated by Nidus Vespae shows it to be a promising source of novel anticariogenic agents.

  4. Anionic Extraction for Efficient Recovery of Biobased 2,3-Butanediol-A Platform for Bulk and Fine Chemicals

    DEFF Research Database (Denmark)

    Drabo, Peter; Tiso, Till; Heyman, Benedikt

    2017-01-01

    2,3-Butanediol (BDO) presents a promising platform molecule for the synthesis of basic and fine chemicals. Biotechnological production of BDO from renewable resources with living microbes enables high concentrations in the fermentation broth. The recovery of high-boiling BDO from an aqueous...... fermentation broth presents a subsequent challenge. A method is proposed for BDO isolation based on reversible complexation with phenylboronate in an anionic complex. BDO can be recovered by back-extraction into an acidic solution. The composition of the extracted species was determined by NMR spectroscopy, MS......, and GC-MS methods. The conditions of extraction and back-extraction were optimized by using commercial BDO and finally applied to different fermentation broths. Up to 72-93 % BDO can be extracted and up to 80-90 % can be back-extracted under the optimized conditions. Purified bio-BDO was used...

  5. An effective method for extraction and polymerase chain reaction ...

    African Journals Online (AJOL)

    root

    seven years, we optimized the method of extracting DNA from these samples. We used (a) ... difficulty in extracting DNA from formalin-preserved tissue samples ..... genomic DNA from whole blood, buccal epithelial cells, semen and forensic ...

  6. Chemical Analysis of Extracts from Newfoundland Berries and Potential Neuroprotective Effects

    Directory of Open Access Journals (Sweden)

    Mohammad Z. Hossain

    2016-10-01

    Full Text Available Various species of berries have been reported to contain several polyphenolic compounds, such as anthocyanins and flavonols, which are known to possess high antioxidant activity and may be beneficial for human health. To our knowledge, a thorough chemical analysis of polyphenolics in species of these plants native to Newfoundland, Canada has not been conducted. The primary objective of this study was to determine the polyphenolic compounds present in commercial extracts from Newfoundland berries, which included blueberries (V. angustifolium, lingonberries (V. vitis-idaea and black currant (Ribes lacustre. Anthocyanin and flavonol glycosides in powdered extracts from Ribes lacustre and the Vaccinium species were identified using the high performance liquid chromatographic (HPLC separation method with mass spectrometric (MS detection. The identified compounds were extracted from dried berries by various solvents via ultrasonication followed by centrifugation. A reverse-phase analytical column was employed to identify the retention time of each chemical component before submission for LC–MS analysis. A total of 21 phenolic compounds were tentatively identified in the three species. Further, we tested the effects of the lingonberry extract for its ability to protect neurons and glia from trauma utilizing an in vitro model of cell injury. Surprisingly, these extracts provided complete protection from cell death in this model. These findings indicate the presence of a wide variety of anthocyanins and flavonols in berries that grow natively in Newfoundland. These powdered extracts maintain these compounds intact despite being processed from berry fruit, indicating their potential use as dietary supplements. In addition, these recent findings and previous data from our lab demonstrate the ability of compounds in berries to protect the nervous system from traumatic insults.

  7. Flavonoids content in extracts secang (Caesalpinia Sappan L. maceration method infundation analysis and visible ultraviolet spectrophotometer

    Directory of Open Access Journals (Sweden)

    Youstiana Dwi Rusita

    2016-04-01

    Full Text Available Secang (Caesalpinia sappan L has a component of a chemical compound essential oils, flavonoids, benzopyran, sapanin, brazilin, caesalpin S, caesalpin P, sapanon A, sapanon B. Flavonoids are chemical components that can be used in medical and industrial fields. This study aimed to determine the levels of flavonoids contained in extracts secang results maceration and extraction methods infundation. This study used quantitative and descriptive research design. This study using purposive sampling with two sample of Caesalpinia sappan L extract result of infundation and maceration. Analysis using univariate analysis. This study shows that there are types of flavonoids flavones, flavonols and flavanols on extracts of Caesalpinia sappan L results maceration method, and there are flavonoid types of flavones, flavonols and flavanols on extracts of Caesalpinia sappan L results infundation method. Flavonoid content test results showed that the levels of flavonoids in extracts of Caesalpinia sappan L results maceration 0.0539% whereas the levels of flavonoids in the extract of Caesalpinia sappan L results infundation methods 0.1902%. Necessary standardization of botanicals Caesalpinia sappan L to determine the levels of flavonoids using ultraviolet visible spectrophotometer, and the analysis of the levels of flavonoids in the extract of Caesalpinia sappan L using different solvents. As a follow-up is necessary to design the manufacture of dosage formulations of the active ingredient flavanoid compounds from the extract of Caesalpinia sappan L.

  8. Chemical Composition of Apricot Pit Shells and Effect of Hot-Water Extraction

    Directory of Open Access Journals (Sweden)

    Derek B. Corbett

    2015-09-01

    Full Text Available Agricultural residues, such as corn stover, wheat straw, and nut shells show promise as feedstocks for lignocellulosic biorefinery due to their relatively high polysaccharide content and low or no nutritional value for human consumption. Apricot pit shells (APS were studied in this work to assess their potential for use in a biorefinery. Hot water extraction (HWE; 160 °C, 2 h, proposed to remove easily accessible hemicelluloses, was performed to evaluate the susceptibility of APS to this mild pretreatment process. The chemical composition of APS before and after HWE (EAPS was analyzed by standard methods and 1H-NMR. A low yield of the remaining HW-extracted APS (~59% indicated that APS are highly susceptible to this pretreatment method. 1H-NMR analysis of EAPS revealed that ~77% of xylan present in raw APS was removed along with ~24% of lignin. The energy of combustion of APS was measured before and after HWE showing a slight increase due to HWE (1.61% increase. Near infrared radiation spectroscopy (NIRS, proposed as a quick non-invasive method of biomass analysis, was performed. NIRS corroborated results of traditional analysis and 1H-NMR. Determination of antioxidizing activity (AOA of APS extracts was also undertaken. AOA of organic APS extracts were shown to be more than 20 times higher than that of a synthetic antioxidizing agent.

  9. Antioxidant and Antibacterial Assays on Polygonum minus Extracts: Different Extraction Methods

    OpenAIRE

    2015-01-01

    The effect of solvent type and extraction method was investigated to study the antioxidant and antibacterial activity of Polygonum minus. Two extraction methods were used: a solvent extraction using Soxhlet apparatus and supercritical fluid extraction (SFE). The antioxidant capacity was evaluated using the ferric reducing/antioxidant power (FRAP) assay and the free radical-scavenging capacity of 2,2-diphenyl-1-picrylhydrazyl (DPPH) assay. The highest polyphenol content was obtained from the m...

  10. Development of Poliovirus Extraction Method from Stool Extracts by Using Magnetic Nanoparticles Sensitized with Soluble Poliovirus Receptor

    OpenAIRE

    Arita, Minetaro

    2013-01-01

    A method for extracting poliovirus (PV) from stool extracts was developed. Magnetic nanoparticles sensitized with soluble PV receptor efficiently extracted PV pseudovirus (>99% extraction) or endogenous infectious PVs (>90% extraction) from stool extracts. This method would be useful for extraction of PV from crude biological samples.

  11. Chemical composition and antimicrobial activity of hexane leaf extract of Anisopus mannii (Asclepiadaceae

    Directory of Open Access Journals (Sweden)

    Aliyu Muhammad Musa

    2015-06-01

    Full Text Available Objective: To determine the chemical constituents and antimicrobial activity of the hexane leaf extract of Anisopus mannii against a wide range of human pathogenic microorganisms. Methods: The chemical constituents of the hexane leaf extract was determined using gas chromatography-mass spectrometry (GC-MS analysis; and the antimicrobial activity was evaluated on clinical susceptible and resistant bacterial and fungal isolates using the disc diffusion and broth micro dilution methods. Results: GC-MS analysis of the hexane leaf extract revealed 32 compounds, representing 73.8% of the identified components. The major compounds were hexadecanoic acid, ethyl ester (34%, oxirane, hexadecyl- (11% and 9, 12, 15-octadecatrienoic acid, ethyl ester, (Z, Z, Z (9.6%. Results from the antimicrobial activity demonstrated higher inhibition zones against B. cereus (29 mm, followed by S. pyogenes (28 mm. Other notable inhibitions were observed with E. faecalis (27 mm, P. vulgaris (26 mm and MRSA (25 mm. The MIC values ranged from 0.625 mg/mL to 1.25 mg/mL while the MBC/MFC values ranged from 2.5 mg/mL to 5.0 mg/mL. Conclusion: These results support the traditional use of the plant and demonstrate the huge potential of A. mannii as a source of antimicrobial compounds. [J Intercult Ethnopharmacol 2015; 4(2.000: 129-133

  12. Chemical detection system and related methods

    Energy Technology Data Exchange (ETDEWEB)

    Caffrey, Augustine J.; Chichester, David L.; Egger, Ann E.; Krebs, Kenneth M.; Seabury, Edward H.; Van Siclen, Clinton D.; Wharton, C. Jayson; Zabriskie, John M.

    2017-06-27

    A chemical detection system includes a frame, an emitter coupled to the frame, and a detector coupled to the frame proximate the emitter. The system also includes a shielding system coupled to the frame and positioned at least partially between the emitter and the detector, wherein the frame positions a sensing surface of the detector in a direction substantially parallel to a plane extending along a front portion of the frame. A method of analyzing composition of a suspect object includes directing neutrons at the object, detecting gamma rays emitted from the object, and communicating spectrometer information regarding the gamma rays. The method also includes presenting a GUI to a user with a dynamic status of an ongoing neutron spectroscopy process. The dynamic status includes a present confidence for a plurality of compounds being present in the suspect object responsive to changes in the spectrometer information during the ongoing process.

  13. Ball mill assisted rapid mechanochemical extraction method for natural products from plants.

    Science.gov (United States)

    Wang, Man; Bi, Wentao; Huang, Xiaohua; Chen, David Da Yong

    2016-06-03

    A ball mill assisted mechanochemical extraction method was developed to extract compounds of natural product (NP) from plant using ionic liquid (IL). A small volume ball mill, also known as PastPrep(®) Homogenizer, which is often used for high-speed lysis of biological samples and for other applications, was used to dramatically increase the speed, completeness and reproducibility of the extraction process at room temperature to preserve the chemical integrity of the extracted compounds. In this study, tanshinones were selected as target compounds to evaluate the performance of this extraction method. Factors affecting the extraction efficiency, such as the duration, IL concentration and solid/liquid ratio were systematically optimized using the response surface methodology. Under the optimized conditions, the described method was more efficient and much faster than the conventional extraction methods such as methanol based ultrasound assisted extraction (UAE) and heat reflux extraction (HRE) that consumes a lot more organic solvent. In addition, the natural products of interest were enriched by anion metathesis of ionic liquids, combining extraction and preconcentration in the same process. The extractant was analyzed by HPLC and LC-MS. The reproducibility (RSD, n=5), correlation coefficient (r(2)) of the calibration curve, and the limit of detection, were determined to be in the range of 4.7-5.2%, 0.9992-0.9995, and 20-51ng/mL, respectively.

  14. Antioxidant activity and chemical composition of Juniperus excelsa ssp. polycarpos wood extracts.

    Science.gov (United States)

    Hosseinihashemi, S K; Dadpour, A; Lashgari, A

    2017-03-01

    Extracts from the wood of Juniperus excelsa ssp. polycarpos were analysed for their antioxidant activity using the DPPH method and compared with ascorbic acid and butylated hydroxytoluene. The most active extracts were analysed for their chemical composition using gas chromatography-mass spectrometry. Acetone extract was found to be moderately active as an antioxidant agent at 58.38%, which was lower than the value of vitamin C (98.56%) at the concentration of 14.20 mg/mL. The major components identified in the acetone extract as trimethylsilyl (TMS) derivatives were pimaric acid TMS (24.56%), followed by α-d-glucopyranoside,1,3,4,6-tetrakis-O-(TMS)-β-d-fructofuranosyl 2,3,4,6-tetrakis-O-(TMS) (21.39%), triflouromethyl-bis-(TMS)methyl ketone (9.32%), and cedrol (0.72%). The dissolved water:methanol (1:1 v/v) partitioned from acetone extract afforded 12 fractions; among them, the F9 fraction was found to have good antioxidant activity (88.49%) at the concentration of 14.20 mg/mL. The major compounds identified in F9 fraction were α-d-glucopyranoside, 1,3,4,6-tetrakis-O-(TMS) (20.22%) and trifluoromethyl-bis-(TMS)methyl ketone (5.10%).

  15. Insecticidal activities and chemical components of alcohol extract from leaves of Rhodendron dauricum L.

    Institute of Scientific and Technical Information of China (English)

    SUN Mo-long; WANG Tian-miao

    2011-01-01

    The extract from leaves of Rhododendron dauricum L. was extracted with 95% alcohol by common method for studying its insecticidal activities. The chemical components of the alcohol extract and relative contents were analyzed by GC-MS. The insecticidal activities of the alcohol extract were tested on the 2nd-3rd instar larvae of Lymantria dispar L. for five days. Five concentrations of the extract samples were designed as 50, 10, 5, 1, and 0.5 g·L-1. The results show that the alcohol extracts from leaves of R. dauricum exhibited insecticidal activities against larvae of L. dispar. The corrected mortality of larvae of L. dispar for was over 50% for both contact toxicity and stomach toxicity at the extract concentration of ≥ 5 g·L-1 after five days of application. The insecticidal activity in contact toxicity is more effect than stomach toxicity for the alcohol extract. Twenty compounds, with total GC relative contents of 93.81% in the alcohol extract from leaves of R. dauricum were identified. The main chemical components in the cxtract are: (1) 4,5-Dihydro-5-oxo-3-(p-tolyl) isoxazole, with a relative content of 40.03%; (2) 1,3-Benzenediol, 5-methyl-2-(3,7,11-trimethyl-2,6,10-dodecatrienyl)-, (E,E)-, the relative content 18.27%; (3) 3,6-Diphenyl-1,2,3,4,5,6,7,8-octahydro-l,8-acridinedione, the relative content 3.89%;(4) 6H-[l ,2,4]Triazolo[1,5-a]indole, 4a,5,7,8,8a,9-hexahydro-9-methylene-, the relative content 2.99%; (5) 7-Amino-4-methyl-l,8-naphthyridino2-ol, the relative content 2.64%; (6) 4-Methyl-2,6-dihydroxyquinoline, the relative content 2.63%; (7) 2,4,6-Triaminoquilazoline, the relative content 2.27%; (8) 2(1H)-Quinolinone,4-hydroxy-1-methyl-, the relative content 2.02%.

  16. CHEMDNER: The drugs and chemical names extraction challenge

    OpenAIRE

    Krallinger, Martin; Leitner, Florian; Rabal, Obdulia; Vázquez, Miguel; Oyarzabal, Julen; Valencia, Alfonso

    2015-01-01

    Natural language processing (NLP) and text mining technologies for the chemical domain (ChemNLP or chemical text mining) are key to improve the access and integration of information from unstructured data such as patents or the scientific literature. Therefore, the BioCreative organizers posed the CHEMDNER (chemical compound and drug name recognition) community challenge, which promoted the development of novel, competitive and accessible chemical text mining systems. This task al...

  17. DEVELOPMENT OF THE EFFECTIVE METHOD FOR THE EXTRACTION OF SUCROSE

    Directory of Open Access Journals (Sweden)

    N. G. Kulneva

    2014-01-01

    Full Text Available Summary. Application of slanted diffusers is accompanied with irregular heating of juice- and chips mixture in the unit length, which reduces the degree of extraction of sucrose from chips and microorganisms intensive growth inside the apparatuses, increases the sucrose loss during the extraction and the time of the whole process. A method for preprocessing of beet chips prior to extraction with hot solutions of chemical agents was suggested. It was experimentally found out that the best quality indicators are inherent to the juice obtained from chips treated with a solution of 0.05 % aluminum sulfate or with 0.10% bleach solution. Thermal processing of beet chips with the solutions of Al2(SO43 with a concentration of 0.05% and bleach with a concentration of 0.10 % results in a gradual beet chips uniform heating and denaturation of the proteins, which increases the mass transfer coefficient of sugarbeet tissue, increasing its permeability. Beet chips surface washing aluminum sulfate solution reduces the solubility of the protein and pectin substances, increasing the strength and elasticity of beet chips. pH of the medium is stabilized, which reduces the transition of non-sugars from beet chips into the diffusion juice in the process of sucrose extraction. Combination of thermal and chemical treatment allows to stabilize the colloids of sugarbeet tissue and to heat beet chips to the optimum temperature of the diffusion process of 70-72 °C before entering the diffusion apparatus and to improve its structural and mechanical properties. The use of preliminary heat treatment of beet chips: improves the efficiency of diffusion processes; blocks the transition of substances of protein-pectin complex of beet chips into the raw juice, whereby their content in the diffusion juice is reduced; reduces the color of purified juice by 15.1 %, the content of calcium salts by 31.3 % in comparison with the standard method; -improves the purity of the purified

  18. Advanced Extraction Methods for Actinide/Lanthanide Separations

    Energy Technology Data Exchange (ETDEWEB)

    Scott, M.J.

    2005-12-01

    The separation of An(III) ions from chemically similar Ln(III) ions is perhaps one of the most difficult problems encountered during the processing of nuclear waste. In the 3+ oxidation states, the metal ions have an identical charge and roughly the same ionic radius. They differ strictly in the relative energies of their f- and d-orbitals, and to separate these metal ions, ligands will need to be developed that take advantage of this small but important distinction. The extraction of uranium and plutonium from nitric acid solution can be performed quantitatively by the extraction with the TBP (tributyl phosphate). Commercially, this process has found wide use in the PUREX (plutonium uranium extraction) reprocessing method. The TRUEX (transuranium extraction) process is further used to coextract the trivalent lanthanides and actinides ions from HLLW generated during PUREX extraction. This method uses CMPO [(N, N-diisobutylcarbamoylmethyl) octylphenylphosphineoxide] intermixed with TBP as a synergistic agent. However, the final separation of trivalent actinides from trivalent lanthanides still remains a challenging task. In TRUEX nitric acid solution, the Am(III) ion is coordinated by three CMPO molecules and three nitrate anions. Taking inspiration from this data and previous work with calix[4]arene systems, researchers on this project have developed a C3-symmetric tris-CMPO ligand system using a triphenoxymethane platform as a base. The triphenoxymethane ligand systems have many advantages for the preparation of complex ligand systems. The compounds are very easy to prepare. The steric and solubility properties can be tuned through an extreme range by the inclusion of different alkoxy and alkyl groups such as methyoxy, ethoxy, t-butoxy, methyl, octyl, t-pentyl, or even t-pentyl at the ortho- and para-positions of the aryl rings. The triphenoxymethane ligand system shows promise as an improved extractant for both tetravalent and trivalent actinide recoveries form

  19. Methods in industrial biotechnology for chemical engineers

    CERN Document Server

    Kandasamy, W B Vasantha

    2008-01-01

    In keeping with the definition that biotechnology is really no more than a name given to a set of techniques and processes, the authors apply some set of fuzzy techniques to chemical industry problems such as finding the proper proportion of raw mix to control pollution, to study flow rates, to find out the better quality of products. We use fuzzy control theory, fuzzy neural networks, fuzzy relational equations, genetic algorithms to these problems for solutions. When the solution to the problem can have certain concepts or attributes as indeterminate, the only model that can tackle such a situation is the neutrosophic model. The authors have also used these models in this book to study the use of biotechnology in chemical industries. This book has six chapters. First chapter gives a brief description of biotechnology. Second chapter deals will proper proportion of mix of raw materials in cement industries to minimize pollution using fuzzy control theory. Chapter three gives the method of determination of te...

  20. Data showing chemical compositions of the essential oils of the leaves of Cymbopogon citratus obtained by varying pH of the extraction medium.

    Science.gov (United States)

    Ajayi, E O; Sadimenko, A P; Afolayan, A J

    2016-09-01

    This article describes the various chemical components as obtained from the oils in the leaves of Cymbopogon citratus using hydrodistillation and solvent-free microwave extraction methods. Furthermore, extractions of the oils were also carried out with a slight in pH variation and compared, "GC-MS evaluation of C. citratus (DC) Stapf oil obtained using modified hydrodistillation and microwave extraction methods" (Ajayi et al., 2016 [1]). The current article contains one table exhibiting a list of compounds in the four different methods of extraction. Comparative studies amongst the various methods of extraction are highlighted in the table.

  1. Extraction of lycopene from tomato paste by ursodeoxycholic acid using the selective inclusion complex method.

    Science.gov (United States)

    Seifi, Mahmoud; Seifi, Parisa; Hadizadeh, Farzin; Mohajeri, Seyed Ahmad

    2013-11-01

    Lycopene, a precursor of β-carotene with well-known antioxidant activity and powerful health properties, can be found in many natural products such as tomato (Lycopersicon esculentum), watermelon, red pepper, and papaya. Many separation methods have been reported for extracting lycopene from its sources. The inclusion complex is an effective method for extraction and purification of organic chemicals. This procedure has 2 main components: host and guest molecules. In this study, lycopene (guest) was extracted from tomato paste by ursodeoxycholic acid, the inclusive agent (host). The molecular structure of the extracted lycopene was then confirmed by (1) HNMR and its purity was evaluated using high-performance liquid chromatography and UV-Vis spectrophotometry methods, in comparison with a standard product. The results indicated that the proposed separation method was very promising and could be used for the extraction and purification of lycopene from tomato paste.

  2. Leukocyte telomere length variation due to DNA extraction method.

    Science.gov (United States)

    Denham, Joshua; Marques, Francine Z; Charchar, Fadi J

    2014-12-04

    Telomere length is indicative of biological age. Shorter telomeres have been associated with several disease and health states. There are inconsistencies throughout the literature amongst relative telomere length measured by quantitative PCR (qPCR) and different extraction methods or kits used. We quantified whole-blood leukocyte telomere length using the telomere to single copy gene (T/S) ratio by qPCR in 20 young (18-25 yrs) men after extracting DNA using three common extraction methods: Lahiri and Nurnberger (high salt) method, PureLink Genomic DNA Mini kit (Life Technologies) and QiaAmp DNA Mini kit (Qiagen). Telomere length differences of DNA extracted from the three extraction methods was assessed by one-way analysis of variance (ANOVA). DNA purity differed between extraction methods used (P=0.01). Telomere length was impacted by the DNA extraction method used (P=0.01). Telomeres extracted using the Lahiri and Nurnberger method (mean T/S ratio: 2.43, range: 1.57-3.02) and PureLink Genomic DNA Mini Kit (mean T/S ratio: 2.57, range: 2.24-2.80) did not differ (P=0.13). Likewise, QiaAmp and Purelink-extracted telomeres were not statistically different (P=0.14). The Lahiri-extracted telomeres, however, were significantly shorter than those extracted using the QiaAmp DNA Mini Kit (mean T/S ratio: 2.71, range: 2.32-3.02; P=0.003). DNA purity was associated with telomere length. There are discrepancies between the length of leukocyte telomeres extracted from the same individuals according to the DNA extraction method used. DNA purity could be responsible for the discrepancy in telomere length but this will require validation studies. We recommend using the same DNA extraction kit when quantifying leukocyte telomere length by qPCR or when comparing different cohorts to avoid erroneous associations between telomere length and traits of interest.

  3. Extraction of essential oil from Cupressus sempervirens: comparison of global yields, chemical composition and antioxidant activity obtained by hydrodistillation and supercritical extraction.

    Science.gov (United States)

    Nejia, Herzi; Séverine, Camy; Jalloul, Bouajila; Mehrez, Romdhane; Stéphane, Condoret Jean

    2013-01-01

    In this study, supercritical fluid extraction (SFE) with CO2 and hydrodistillation (HD) were compared as methods to isolate the essential oil from Cupressus sempervirens. The odour of the oil obtained by SFE at 90 bar and 40°C was very close to the odour of the leaves of C. sempervirens before the extraction. Compounds extracted by both SFE and HD were identified by GC-FID and GC-MS. Moreover, the difference in the chemical composition obtained by SFE and HD was quite noticeable qualitatively and quantitatively. Phenolic composition and antioxidant activity were also determined. Compared to HD, the SFE method presents some advantages: the extraction was completed after 1 h in SFE, although 4 h is necessary for HD, and the yield was improved by 34%. Finally, it has also been shown that SFE is very selective towards some specific components such as manoyl oxide, trans-totarol and α-acoradiene.

  4. Natural colorants: Pigment stability and extraction yield enhancement via utilization of appropriate pretreatment and extraction methods.

    Science.gov (United States)

    Ngamwonglumlert, Luxsika; Devahastin, Sakamon; Chiewchan, Naphaporn

    2017-10-13

    Natural colorants from plant-based materials have gained increasing popularity due to health consciousness of consumers. Among the many steps involved in the production of natural colorants, pigment extraction is one of the most important. Soxhlet extraction, maceration, and hydrodistillation are conventional methods that have been widely used in industry and laboratory for such a purpose. Recently, various non-conventional methods, such as supercritical fluid extraction, pressurized liquid extraction, microwave-assisted extraction, ultrasound-assisted extraction, pulsed-electric field extraction, and enzyme-assisted extraction have emerged as alternatives to conventional methods due to the advantages of the former in terms of smaller solvent consumption, shorter extraction time, and more environment-friendliness. Prior to the extraction step, pretreatment of plant materials to enhance the stability of natural pigments is another important step that must be carefully taken care of. In this paper, a comprehensive review of appropriate pretreatment and extraction methods for chlorophylls, carotenoids, betalains, and anthocyanins, which are major classes of plant pigments, is provided by using pigment stability and extraction yield as assessment criteria.

  5. Cd phytoavailability in sewage sludge-amended soil of different pH estimated by an isotopic method and chemical extraction; Fitodisponibilidad de Cd en suelo de diferente pH tratado com lodo albanal estimada por metodo isotopico y extraccion quimica

    Energy Technology Data Exchange (ETDEWEB)

    Alvarez Villanueva, Felipe Carlos; Boaretto, Antonio Enedi; Abreu Junior, Cassio Hamilton; Muraoka, Takashi; Trevizam, Anderson Ricardo [Centro de Energia Nuclear na Agricultura (CENA), Piracicaba, SP (Brazil). Div. de Produtividade Agroindustrial e Alimentos]. E-mail: falvarez@cena,usp.br; Nascimento Filho, Virgilio Franco do [Centro de Energia Nuclear na Agricultura (CENA), Piracicaba, SP (Brazil). Div. de Desenvolvimento de Meeodos e Tecnicas Analiticas e Nucleares

    2008-07-01

    The Cd phytoavailability in sewage sludge-amended soils of different pHs using the {sup 109}Cd L-value isotopic method and Cd extracted by DTPA has been determined. Maize plants (Zea mais L.) were grown under greenhouse conditions in a xanthic ferralsol at different pHs amended with five sewage sludge (SS) rates, and labeled with 74 kBq kg{sup -1} of {sup 109}Cd. The SS rates altered the properties of the soil chemicals and these influenced the isotopic parameter (L-value) and percent of Cd uptake by plants from soil (%Cdpdfs) and SS (%CdpdfSS). L-values and Cd extracted by DTPA correlate significantly with SS rates and Cd uptake by plants and are efficient for predicting the Cd phytoavailability in the sewage sludge-amended soil. (author)

  6. Fast New Method for Temporary Chemical Passivation

    Directory of Open Access Journals (Sweden)

    Marek Solčanský

    2012-12-01

    Full Text Available The main material parameter of silicon, that influences the effectiveness of photovoltaic cells, is the minority carrier bulk lifetime.It may change in the technological process especially during high temperature operations. Monitoring of the carrier bulk-lifetimeis necessary for modifying the whole technological process of production. For the measurement of the minority carrier bulk-lifetimethe characterization method MW PCD (Microwave Photoconductance Decay is used, where the result of measurement is the effectivecarrier lifetime, which is very dependent on the surface recombination velocity and therefore on the quality of a silicon surfacepassivation.This work deals with an examination of a different solution types for the chemical passivation of a silicon surface. Varioussolutions are tested on silicon wafers for their consequent comparison. The main purpose of this work is to find optimal solution, whichsuits the requirements of a time stability and start-up velocity of passivation, reproducibility of the measurements and a possibilityof a perfect cleaning of a passivating solution remains from a silicon surface. Another purpose of this work is to identify the parametersof other quinhydrone solutions with different concentrations as compared with the quinhydrone solution in methanol witha concentration of 0.07 mol/dm³ marked QM007 (referential solution.The method of an effective chemical passivation with a quinhydrone in methanol solution was suggested. The solution witha concentration of 0.07 mol /dm3 fulfills all required criteria. The work also confirms the influence of increased concentrationquinhydrone on the temporal stability of the passivation layer and the effect for textured silicon wafers. In conclusion, the influenceof an illumination and the temperature on the properties of the passivating solution QM007 is discussed.

  7. Chemical Methods for Peptide and Protein Production

    Directory of Open Access Journals (Sweden)

    Istvan Toth

    2013-04-01

    Full Text Available Since the invention of solid phase synthetic methods by Merrifield in 1963, the number of research groups focusing on peptide synthesis has grown exponentially. However, the original step-by-step synthesis had limitations: the purity of the final product decreased with the number of coupling steps. After the development of Boc and Fmoc protecting groups, novel amino acid protecting groups and new techniques were introduced to provide high quality and quantity peptide products. Fragment condensation was a popular method for peptide production in the 1980s, but unfortunately the rate of racemization and reaction difficulties proved less than ideal. Kent and co-workers revolutionized peptide coupling by introducing the chemoselective reaction of unprotected peptides, called native chemical ligation. Subsequently, research has focused on the development of novel ligating techniques including the famous click reaction, ligation of peptide hydrazides, and the recently reported a-ketoacid-hydroxylamine ligations with 5-oxaproline. Several companies have been formed all over the world to prepare high quality Good Manufacturing Practice peptide products on a multi-kilogram scale. This review describes the advances in peptide chemistry including the variety of synthetic peptide methods currently available and the broad application of peptides in medicinal chemistry.

  8. Different methods to select the best extraction system for solid-phase extraction.

    Science.gov (United States)

    Bielicka-Daszkiewicz, Katarzyna

    2015-02-01

    The optimization methods for planning a solid-phase extraction experiment are presented. These methods are based on a study of interactions between different parts of an extraction system. Determination of the type and strength of interaction depends on the physicochemical properties of the individual components of the system. The main parameters that determine the extraction properties are described in this work. The influence of sorbents' and solvents' polarity on extraction efficiency, Hansen solubility parameters and breakthrough volume determination on sorption and desorption extraction step are discussed.

  9. Physico Chemical Properties and Antioxidant Activity of Roselle Seed Extracts

    Directory of Open Access Journals (Sweden)

    Abdoulaye Idrissa Cissouma

    2013-11-01

    Full Text Available The aim of this research was to extract phenolic compounds from defatted Roselle (Hibiscus sabdariffaL. seed and assess their antioxidant potential. Water, ethanol (30%, methanol (30% and acetone (30% were used as solvent for extraction. The proximate composition, total phenolic content and extraction yield were analyzed. Antioxidant efficacies of Roselle seed extract were tested by using 1, 1-Diphenyl-2-Picrylhydrazyl (DPPH, hydroxyl, 2, 2’-azinobis-3-ethylbenzothiaz oline-6-sulfonic acid (ABTS radicals scavenging capacities and reducing power analysis. Roselle seeds were found to be rich in protein (27.745%, carbohydrates (40.45% and oil (20.83%. The total phenolic content ranged from 1.66±0.03 to 1.99±0.01 (GAE mg/g using water and 30% acetone respectively. The highest inhibitory capacity on DPPH and ABTS radicals was observed in 30% acetone extract and was at 3 mg/mL for DPPH and 6 mg/mL for ABTS respectively. Ethanol extract showed the highest hydroxyl radical scavenging ability value of 66.36 at 20 mg/mL, followed by methanol (57.27, acetone (56.36 and water (30. The reducing potential of the different extracts was concentration dependent and increased with increase in concentration. These results indicate that substantial antioxidant activity can be obtained from Roselle seed phenolic compounds extract by using 30% acetone.

  10. Soil parameters are key factors to predict metal bioavailability to snails based on chemical extractant data

    Energy Technology Data Exchange (ETDEWEB)

    Pauget, B.; Gimbert, F., E-mail: frederic.gimbert@univ-fcomte.fr; Scheifler, R.; Coeurdassier, M.; Vaufleury, A. de

    2012-08-01

    to snails. Black-Right-Pointing-Pointer Bioavailability of cadmium, lead and zinc to snails was determined by assessing accumulation kinetics. Black-Right-Pointing-Pointer EDTA extracts and total soil concentration allows the assessment of bioavailability to snails for Cd and Pb, respectively. Black-Right-Pointing-Pointer No chemical method allows the assessment of Zn bioavailability to snails. Black-Right-Pointing-Pointer Total soil concentration coupled with soil characteristics allow Cd, Pb and Zn bioavailability to snails to be predicted.

  11. Propolis Standardized Extract (EPP-AF®), an Innovative Chemically and Biologically Reproducible Pharmaceutical Compound for Treating Wounds

    Science.gov (United States)

    Berretta, Andresa Aparecida; Nascimento, Andresa Piacezzi; Bueno, Paula Carolina Pires; de Oliveira Lima Leite Vaz, Mirela Mara; Marchetti, Juliana Maldonado

    2012-01-01

    The aim of this study was to develop a formulation, containing the propolis standardized extract (EPP-AF®), which can assist in the healing of skin lesions. To achieve this objective the antimicrobial activity and chemical composition of the propolis extract was determined. The final product was subjected to in vitro and in vivo pre-clinical evaluation. The broth macrodilution method was used to determine the antimicrobial activity of the extracts and formulations against the microorganisms most commonly found in burns, Pseudomonas aeruginosa, Klebsiella pneumoniae, Escherichia coli, Staphylococcus aureus and Staphylococcus epidermidis. Wistar rats with puncture wounded skin were used to evaluate the wound healing properties of propolis. The results of chemical and biological characterization demonstrated the batch-to-batch reproducibility of the standardized extract which is an unprecedented result. The antimicrobial and wound healing activity of the pharmaceutical studied showed the best results when samples contain 3.6% propolis, suggesting that this is the most promising composition. PMID:22457606

  12. Chemically extracted acellular allogeneic nerve graft combined with ciliary neurotrophic factor promotes sciatic nerve repair

    Institute of Scientific and Technical Information of China (English)

    Yanru Zhang; Hui Zhang; Kaka Katiella; Wenhua Huang

    2014-01-01

    A chemically extracted acellular allogeneic nerve graft can reduce postoperative immune re-jection, similar to an autologous nerve graft, and can guide neural regeneration. However, it remains poorly understood whether a chemically extracted acellular allogeneic nerve graft combined with neurotrophic factors provides a good local environment for neural regenera-tion. This study investigated the repair of injured rat sciatic nerve using a chemically extracted acellular allogeneic nerve graft combined with ciliary neurotrophic factor. An autologous nerve anastomosis group and a chemical acellular allogeneic nerve bridging group were prepared as controls. At 8 weeks after repair, sciatic functional index, evoked potential amplitude of the soleus muscle, triceps wet weight recovery rate, total number of myelinated nerve fibers and myelin sheath thickness were measured. For these indices, values in the three groups showed the autologous nerve anastomosis group > chemically extracted acellular nerve graft + ciliary neurotrophic factor group > chemical acellular allogeneic nerve bridging group. These results suggest that chemically extracted acellular nerve grafts combined with ciliary neurotrophic factor can repair sciatic nerve defects, and that this repair is inferior to autologous nerve anasto-mosis, but superior to chemically extracted acellular allogeneic nerve bridging alone.

  13. Chemical profiling of Curcuma aeruginosa Roxb. rhizome using different techniques of solvent extraction

    Institute of Scientific and Technical Information of China (English)

    Sanimah; Simoh; Alizah; Zainal

    2015-01-01

    .70%), propiolic acid, 3-(1-hydroxy-2-isopropyl-5-methylcyclohexyl)(11.09%), stearic acid, TMS ester(2.78%), hexadecanoic acid, TMS ester(2.33%), oleic acid, TMS ester(1.62%), curzerene(1.56%); Z-α-farnesene(1.52%), germacrone(1.41%) and β-elemene(1.33%). Conclusions: It was evident from the results that C. aeruginosa rhizome extracted using two different techniques of solvent extractions(MTBE and M/C) contained various chemical classes of compounds including terpenoids, sterols, organic acids, fatty acids and sugars. Different methods of extraction have led to different compounds extraction for C. aeruginosa rhizome. The results also indicated that the plant was a source of phytochemical importance.

  14. Comparison of Pore Water Chemical Extracted by Different Forces with In-situ Properties

    Science.gov (United States)

    Ito, N.; Machida, I.; Marui, A.; Scheytt, T.; Hebig, K. H.

    2010-12-01

    Due to the difficulty involved for in-situ sampling of groundwater, pore water was extracted from rock core samples for chemical analysis. Available literature indicated that, the chemical constituents of pore water are affected by large extraction force. This study is therefore aimed at discussing the reason behind the change in pore water chemistry when samples are subjected to different extraction forces. The process involved extraction of pore water from sandstone core samples at different pF values by centrifuge method. The pF expresses the tension of water, retained in soil. It is the base 10 logarithm of tension, which is measured as a head of water head in centimeters. The samples of lengths 100 m each were obtained from three locations. Tracer test using Iodine was also conducted to remove pore water polluted by drilling water. Pore water was extracted from a total of 63 samples at three different values of pF (low: up to pF 2.3, medium: pF 2.3 - 3.9, high: pF 3.9 - 4.3). For each pF range the pore water was analyzed for major anions and cations. Results showed variation of ionic concentrations with pF and depth. The average concentrations rose with increase of pF in all ions except for potassium. Based on the concentration distribution of Ca2+, three zones could be defined: (1) Ca2+ concentration, which does not depend on pF, (2) Ca2+ concentration, which increases with the value of pF and (3) Ca2+ showing the same value for medium and high pF values. It is thus concluded that, water chemistry of deep pore water is likely to have reached equilibrium due to almost stagnant flow conditions, whereas shallow water is likely to participate in chemical interactions due to the relatively high flow velocity. The depths of the interfaces of these three zones are almost consistent with geological boundaries of weathered and fine sandstone and there is evidence of a relationship between pore water chemistry and physical rock properties. Using this knowledge, we

  15. Chemical response to groundwater extraction southeast of Mexico City

    Science.gov (United States)

    Huizar-Alvarez, R.; Carrillo-Rivera, J. J.; Ángeles-Serrano, G.; Hergt, T.; Cardona, A.

    An alternative procedure of pumping test data interpretation is used through a joint analysis of the standard time-drawdown curve and simultaneous field measurements of total dissolved solids (TDS); additional support is also provided by the temperature of extracted groundwater and the chemical composition of extracted water. The overall information was applied to characterise the groundwater flow system and its sources, the hydraulic conditions of the aquifer and hydraulic response of extraction boreholes. The analysis of this information suggests the presence of: (i) a local flow system that circulates at shallow depth through basalt units interstratified with fine grained sediments and pyroclastics; these materials contain water with TDS of 127-600 mg/L and Na of 24-178 mg/L, and temperature of 18-19.5 °C (ii) intermediate flow in granular material under reducing conditions by the oxidation of organic matter in aquitard sediments; this water has TDS and Na values of 203-940 and 30-370 mg/L, respectively, and temperatures of about 20-22 °C (iii) regional flow through volcanic rocks and limestone, with TDS content of 300-700 mg/L, Na of 80-230 mg/L and temperature of 23.0-24.8 °C. The hydraulic response and the chemical composition of the water produced by some boreholes are affected by the seepage inflow from sewage effluents, the input from an overlying aquitard unit and the inducement of regional flow. The conception of the flow regime thus obtained allowed the recognition of hydraulic conditions which were more consistent with the hydrogeological setting, than if only a time vs. drawdown test analysis would have been carried out. L'interprétation simultanée de pompages d'essais, des données de température et résidu sec (RS) de L'eau souterraine pompée, mesurées simultanément sur le terrain et la composition chimique de L'eau pompée comme un aide additionnelle, est utilisée comme une différent procédure pour interpréter les pompages d'essais. La

  16. Evaluation of extraction and non-extraction treatment effects by two different superimposition methods.

    Science.gov (United States)

    Türköz, Çağrı; İşcan, Hakan Necip

    2011-12-01

    The aim of this study was to determine whether different evaluation methods may be the cause of the varied outcomes of research that have evaluated the effects of extraction and non-extraction therapy on jaw rotation. This retrospective study consisted of the pre- (T1) and post- (T2) treatment lateral cephalograms of 70 skeletal Class I subjects with an optimal vertical mandibular plane angle, who had undergone fixed orthodontic treatment. Thirty-five of the subjects (20 females and 15 males, mean age: 14.7 years) were treated with four first premolar extractions and 35 (22 females and 13 males, mean age: 15 years) without extractions. T1 and T2 radiographs were superimposed using Björk's structural method and Steiner's method of sella-nasion line registered at sella. A Wilcoxon test was used to evaluate the changes between T1 and T2 and the Mann-Whitney U-test to determine differences between the extraction and non-extraction and Björk and Steiner groups. No significant difference was found between the methods of Steiner and Björk according to the spatial changes of the cephalometric points in the extraction and non-extraction groups. The maxilla showed forward rotation in the extraction group and backward rotation in the non-extraction group with both superimposition methods, but the differences were not significant in either inter- or intraclass comparisons. The mandible showed forward rotation in the extraction group with both superimposition methods but, in the non-extraction group, forward rotation was recorded with Björk's method and backward rotation with Steiner's method. These findings were not significant in either inter- or intraclass evaluations. No significant difference was found between the groups or methods.

  17. Observation of different ceramide species from crude cellular extracts by normal-phase high-performance liquid chromatography coupled to atmospheric pressure chemical ionization mass spectrometry

    NARCIS (Netherlands)

    Pettus, BJ; Bielawska, A; Kroesen, BJ; Moeller, PDR; Szulc, ZM; Hannun, YA; Busman, M

    2003-01-01

    Normal-phase high-performance liquid chromatography (NP-HPLC) coupled to atmospheric pressure chemical ionization mass spectrometry (APCI-MS) allows qualitative analysis of endogenous ceramide and dihydroceramide species from crude lipid extracts utilizing chromatographic methods readily adaptable

  18. Data showing chemical compositions of the essential oils of the leaves of Cymbopogon citratus obtained by varying pH of the extraction medium

    Directory of Open Access Journals (Sweden)

    E.O. Ajayi

    2016-09-01

    Full Text Available This article describes the various chemical components as obtained from the oils in the leaves of Cymbopogon citratus using hydrodistillation and solvent-free microwave extraction methods. Furthermore, extractions of the oils were also carried out with a slight in pH variation and compared, “GC–MS evaluation of C. citratus (DC Stapf oil obtained using modified hydrodistillation and microwave extraction methods” (Ajayi et al., 2016 [1]. The current article contains one table exhibiting a list of compounds in the four different methods of extraction. Comparative studies amongst the various methods of extraction are highlighted in the table.

  19. Methods for microbial DNA extraction from soil for PCR amplification

    Directory of Open Access Journals (Sweden)

    Yeates C

    1998-01-01

    Full Text Available Amplification of DNA from soil is often inhibited by co-purified contaminants. A rapid, inexpensive, large-scale DNA extraction method involving minimal purification has been developed that is applicable to various soil types (1. DNA is also suitable for PCR amplification using various DNA targets. DNA was extracted from 100g of soil using direct lysis with glass beads and SDS followed by potassium acetate precipitation, polyethylene glycol precipitation, phenol extraction and isopropanol precipitation. This method was compared to other DNA extraction methods with regard to DNA purity and size.

  20. Spectrophotometric validation of assay method for selected medicinal plant extracts

    OpenAIRE

    Matthew Arhewoh; Augustine O. Okhamafe

    2014-01-01

    Objective: To develop UV spectrophotometric assay validation methods for some selected medicinal plant extracts.Methods: Dried, powdered leaves of Annona muricata (AM) and Andrographis paniculata (AP) as well as seeds of Garcinia kola (GK) and Hunteria umbellata (HU) were separately subjected to maceration using distilled water. Different concentrations of the extracts were scanned spectrophotometrically to obtain wavelengths of maximum absorbance. The different extracts were then subjected t...

  1. 物理联合化学或化学方法处理去抗原异种松质骨支架与骨髓间充质干细胞的细胞相容性%Cytocompatibility of bone marrow mesenchymal stem cells and antigen-extracted xenogeneic cancellous bone scaffold treated by physiochemical or chemical method

    Institute of Scientific and Technical Information of China (English)

    许慧芬; 何惠宇; 唐小雪

    2012-01-01

    背景:研究证明去抗原异种松质骨支架具有良好的理化性能和三维立体多孔结构,但应用于临床还需要考虑其安全性和生物相容性.目的:比较物理联合化学及化学方法处理去抗原异种松质骨支架与羊骨髓间充质干细胞的细胞相容性.方法:用梯度密度离心法分离培养羊骨髓间充质干细胞,四甲基偶氮唑盐比色法检测物理联合化学及化学方法处理去抗原异种松质骨支架材料对骨髓间充质干细胞增殖的影响.取第3代骨髓间充质干细胞,接种在两种支架上共同培养,倒置相差显微镜和扫描电镜观察细胞在两种支架材料上的形态、黏附、生长和增殖情况.结果与结论:物理联合化学组细胞毒性为0或1级,细胞能在材料上良好地黏附、增殖、生长,细胞活性未受到支架材料的影响.化学组细胞毒性为3级,细胞在材料上生长受到抑制,支架孔隙内无细胞黏附.提示经过物理联合化学处理的去抗原异种松质骨支架材料与羊骨髓间充质干细胞具有良好的生物相容性;单纯经过化学处理的支架材料生物相容性较差,不符合生物材料安全性标准.%BACKGROUND: Antigen-extracted xenogeneic cancellous bone has been shown to be characterized by well physicochemical performance and three-dimensional stereo porous structure, however, the biocompatibility and safely still need to be further studied in clinical application.OBJECTIVE: To study the cytocompatibility of bone marrow mesenchymal stem cells (BMSCs) and antigen-extracted xenogeneic cancellous bone scaffold treated by chemical or physicochemical method.METHODS: The gradient density centrifugation was used to separate and cultivate sheep BMSCs, the influence of antigen-extracted xenogeneic cancellous bone scaffold materials treated by chemical or physicochemical method on the proliferation of the BMSCs were measured by four thiazole salt colorimetric experiment (MTT method). The

  2. Chemical characterization and insecticidal activity of Calotropis gigantea L. flower extract against Tribolium castaneum (Herbst

    Directory of Open Access Journals (Sweden)

    Muhammad Rowshanul Habib

    2016-12-01

    Full Text Available Objective: To test the insecticidal activity of ethyl acetate extract of Calotropis gigantea L. flower (designated as EECF against stored grain pest Tribolium castaneum (Herbst of different larval and adult stages. Methods: Residual film method was used here to study the toxicity of EECF against Tribolium castaneum and gas chromatography-mass spectrometer analysis was also performed to characterize the chemicals of EECF. Results: In residual film bioassay, EECF showed lowest LD50 (0.134 mg/cm2 against 1st instar larvae of Tribolium castaneum and this finding ultimately revealed that the insect of initial stage was more susceptible than other stages. From the results of this study, it was found that with the increasing of age, Tribolium castaneum showed some extent of resistance against the toxicity of EECF. Moreover, chemical profiles of EECF identified by gas chromatography-mass spectrometer analysis were also found to consistent with its insecticidal activity. Conclusions: So, the overall results suggested that extracts of Calotropis gigantea L. flower have potential insecticidal effect which might be used in pest control.

  3. COMPARISON OF RNA EXTRACTION METHODS FOR Passiflora edulis SIMS LEAVES

    Directory of Open Access Journals (Sweden)

    ANNY CAROLYNE DA LUZ

    2016-02-01

    Full Text Available ABSTRACT Functional genomic analyses require intact RNA; however, Passiflora edulis leaves are rich in secondary metabolites that interfere with RNA extraction primarily by promoting oxidative processes and by precipitating with nucleic acids. This study aimed to analyse three RNA extraction methods, Concert™ Plant RNA Reagent (Invitrogen, Carlsbad, CA, USA, TRIzol® Reagent (Invitrogen and TRIzol® Reagent (Invitrogen/ice -commercial products specifically designed to extract RNA, and to determine which method is the most effective for extracting RNA from the leaves of passion fruit plants. In contrast to the RNA extracted using the other 2 methods, the RNA extracted using TRIzol® Reagent (Invitrogen did not have acceptable A260/A280 and A260/A230 ratios and did not have ideal concentrations. Agarose gel electrophoresis showed a strong DNA band for all of the Concert™ method extractions but not for the TRIzol® and TRIzol®/ice methods. The TRIzol® method resulted in smears during electrophoresis. Due to its low levels of DNA contamination, ideal A260/A280 and A260/A230 ratios and superior sample integrity, RNA from the TRIzol®/ice method was used for reverse transcription-polymerase chain reaction (RT-PCR, and the resulting amplicons were highly similar. We conclude that TRIzol®/ice is the preferred method for RNA extraction for P. edulis leaves.

  4. Extraction of Roots of Quintics by Division Method

    Science.gov (United States)

    Kulkarni, Raghavendra G.

    2009-01-01

    We describe a method to extract roots of a reducible quintic over the real field, which makes use of a simple division. A procedure to synthesize such quintics is given and a numerical example is solved to extract the roots of quintic with the proposed method.

  5. 7 CFR 51.1179 - Method of juice extraction.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Method of juice extraction. 51.1179 Section 51.1179 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards... of Common Sweet Oranges (citrus Sinensis (l) Osbeck) § 51.1179 Method of juice extraction. The...

  6. Are extracted materials truly representative of original samples? Impact of C18 extraction on CDOM optical and chemical properties

    Directory of Open Access Journals (Sweden)

    Andrea A Andrew

    2016-02-01

    Full Text Available Some properties of dissolved organic matter (DOM and chromophoric dissolved organic matter (CDOM can be easily measured directly on whole waters, while others require sample concentration and removal of natural salts. To increase CDOM content and eliminate salts, solid phase extraction is often employed. Biases following extraction and elution are inevitable, thus raising the question of how truly representative the extracted material is of the original. In this context, we investigated the wavelength dependence of extraction efficiency for C18 cartridges with respect to CDOM optical properties using samples obtained from the Middle Atlantic Bight (MAB and the Equatorial Atlantic Ocean (EAO. Further, we compared the optical changes of C18 extracts and the corresponding whole water following chemical reduction with sodium borohydride (NaBH4.C18 cartridges preferentially extracted long-wavelength absorbing/emitting material for samples impacted by riverine input. Extraction efficiency overall decreased with offshore distance away from riverine input. Spectral slopes of C18-OM samples were also almost always lower than those of their corresponding CDOM samples supporting the preferential extraction of higher molecular weight absorbing material. The wavelength dependence of the optical properties (absorption, fluorescence emission and quantum yield of the original water samples and their corresponding extracted material were very similar. C18 extracts and corresponding water samples further exhibited comparable optical changes following NaBH4 reduction, thus suggesting a similarity in nature (structure of the optically active extracted material, independent of geographical locale. Altogether, these data suggested a strong similarity between C18 extracts and corresponding whole waters, thus indicating that extracts are representative of the CDOM content of original waters.

  7. Chemical variability, antioxidant and antifungal activities of essential oils and hydrosol extract of Calendula arvensis L. from western Algeria.

    Science.gov (United States)

    Belabbes, Rania; Dib, Mohammed El Amine; Djabou, Nassim; Ilias, Faiza; Tabti, Boufeldja; Costa, Jean; Muselli, Alain

    2017-01-21

    The chemical composition of the essential oils and hydrosol extract from aerial parts of Calendula arvensis L. was investigated using GC-FID and GC/MS. Intra-species variations of the chemical compositions of essential oils from 18 Algerian sample locations were investigated using statistical analysis. Chemical analysis allowed the identification of fifty-three compounds amounting to 92.3-98.5% with yields varied of 0.09-0.36% and the main compounds were zingiberenol 1 (8.7-29.8%), eremoligenol (4.2-12.5%), β-curcumene (2.1-12.5%), zingiberenol 2 (4.6-19.8%) and (E,Z)-farnesol (3.5-23.4%). The study of the chemical variability of essential oils allowed the discrimination of two main clusters confirming that there is a relation between the essential oil compositions and the harvest locations. Different concentrations of essential oil and hydrosol extract were prepared and their antioxidant activity were assessed using three methods (DPPH, FRAP and β-carotene). The results showed that hydrosol extract presented an interesting antioxidant activity. The in vitro antifungal activity of hydrosol extract produced the best antifungal inhibition against Penicillium expansum and Aspergillus niger, while, essential oil was inhibitory at relatively higher concentrations. Results showed that the treatments of pear fruits with essential oil and hydrosol extract presented a very interesting protective activity on disease severity of pears caused by P. expansum. This article is protected by copyright. All rights reserved.

  8. A new extraction method of bioflavanoids from poisonous plant (Gratiola Officinalis L.

    Directory of Open Access Journals (Sweden)

    Natalya V. Polukonova

    2014-09-01

    Full Text Available The way of vegetable raw materials extraction which allows to receive nontoxical composition of biological active agents from poisonous plants such as Gratiola officinalis L. was described. The alkaloids exit changes with the increase of ethyl alcohol percentage (from 15% to 96%. The extract was obtained using 96% ethanol and did not give positive high quality reaction to the content of alkaloids. The chemical composition with new nontoxical biological active composition of Gratiola officinalis L. extract was investigated. The extract contains a previously unknown plant – bioflavonoid quercetin. The average value of quercetin in this extract using the calibration curve of the standard sample quercetin (98% Sigma is 0.66%. In the dry rest of extractive substances (Gratiola officinalis L. the quantity of quercetin was 350 mkg (obtained from 10 g of a dry grass as was established by the method of a liquid chromatography.

  9. GREENSCOPE: A Method for Modeling Chemical Process ...

    Science.gov (United States)

    Current work within the U.S. Environmental Protection Agency’s National Risk Management Research Laboratory is focused on the development of a method for modeling chemical process sustainability. The GREENSCOPE methodology, defined for the four bases of Environment, Economics, Efficiency, and Energy, can evaluate processes with over a hundred different indicators. These indicators provide a means for realizing the principles of green chemistry and green engineering in the context of sustainability. Development of the methodology has centered around three focal points. One is a taxonomy of impacts that describe the indicators and provide absolute scales for their evaluation. The setting of best and worst limits for the indicators allows the user to know the status of the process under study in relation to understood values. Thus, existing or imagined processes can be evaluated according to their relative indicator scores, and process modifications can strive towards realizable targets. A second area of focus is in advancing definitions of data needs for the many indicators of the taxonomy. Each of the indicators has specific data that is necessary for their calculation. Values needed and data sources have been identified. These needs can be mapped according to the information source (e.g., input stream, output stream, external data, etc.) for each of the bases. The user can visualize data-indicator relationships on the way to choosing selected ones for evalua

  10. Evaluation of Biological Activities of Extracts and Chemical ...

    African Journals Online (AJOL)

    1School of Chemical Sciences, 2School of Pharmaceutical Sciences, Universiti Sains Malaysia, Penang 11800, Malaysia,. 3Faculty of Forestry, University of Khartoum, ..... Taraporevala Sons & Co. Private Ltd,Bombay,. 1962; pp 158-159. 4.

  11. Antibacterial properties and chemical characterization of the essential oils from summer savory extracted by microwave-assisted hydrodistillation

    Directory of Open Access Journals (Sweden)

    Shila Rezvanpanah

    2011-12-01

    Full Text Available Antibacterial properties and chemical characterization of the essential oils from summer savory (Satureja hortensis extracted by microwave-assisted hydrodistillation (MAHD were compared with those of the essential oils extracted using the traditional hydrodistillation (HD method. While MAHD at 660 W required half as much time as HD needed, similar antibacterial efficacies were found from the essential oils obtained by the two extraction methods on two food pathogens (Staphylococcus aureus, a gram positive bacterium, and Escherchia coli, a gram negative bacterium. Also, as it was the case with the essential oils extracted by HD, that of MAHD indicated greater influence on S. aureus than on E. coli. The compositions of the extracted essential oils were also studied using GC-MS analysis. The same components with negligible differences in their quantities were found in the extracted essential oils using the two methods outlined above. Overall, to reduce the extraction time, MAHD can be applied at higher microwave levels without any compromise in the antibacterial properties of the essential oils extracted.

  12. Amniotic Membrane Extract Preparation: What is the Best Method?

    Directory of Open Access Journals (Sweden)

    Mirgholamreza Mahbod

    2014-01-01

    Full Text Available Purpose: To compare different preparation methods for a suitable amniotic membrane (AM extract containing a given amount of growth factors. Methods: In this interventional case series, we dissected the AM from eight placentas within 24 hours after delivery, under clean conditions. After washing and mixing, AM extracts (AMEs were prepared using pulverization and homogenization methods, and different processing and storing conditions. Main outcome measures were the amount of added protease inhibitor (PI, the relative centrifugal force (g, in-process temperature, repeated extraction times, drying percentage, repeated pulverization times, and the effect of filtering with 0.2 μm filters. Extract samples were preserved at different temperature and time parameters, and analyzed for hepatic growth factor (HGF and total protein using ELISA and calorimetric methods, respectively. Results: The extracted HGF was 20% higher with pulverization as compared to homogenization, and increased by increasing the PI to 5.0 μl/g of dried AM. Repeating centrifugation up to 3 times almost doubled the extracted HGF and protein. Storing the AME at −170° for 6 months caused a 50% drop in the level of HGF and protein. Other studied parameters showed no significant effect on the extracted amount of HGF or total protein. Conclusion: Appropriate extraction methods with an adequate amount of PI increases the level of extractable components from harvested AMs. To achieve the maximal therapeutic effects of AMEs, it is necessary to consider the half-life of its bioactive components.

  13. Are extraction methods in quantitative assays of pharmacopoeia monographs exhaustive? A comparison with pressurized liquid extraction.

    Science.gov (United States)

    Basalo, Carlos; Mohn, Tobias; Hamburger, Matthias

    2006-10-01

    The extraction methods in selected monographs of the European and the Swiss Pharmacopoeia were compared to pressurized liquid extraction (PLE) with respect to the yield of constituents to be dosed in the quantitative assay for the respective herbal drugs. The study included five drugs, Belladonnae folium, Colae semen, Boldo folium, Tanaceti herba and Agni casti fructus. They were selected to cover different classes of compounds to be analyzed and different extraction methods to be used according to the monographs. Extraction protocols for PLE were optimized by varying the solvents and number of extraction cycles. In PLE, yields > 97 % of extractable analytes were typically achieved with two extraction cycles. For alkaloid-containing drugs, the addition of ammonia prior to extraction significantly increased the yield and reduced the number of extraction cycles required for exhaustive extraction. PLE was in all cases superior to the extraction protocol of the pharmacopoeia monographs (taken as 100 %), with differences ranging from 108 % in case of parthenolide in Tanaceti herba to 343 % in case of alkaloids in Boldo folium.

  14. Chemical Methods for Ugnu Viscous Oils

    Energy Technology Data Exchange (ETDEWEB)

    Kishore Mohanty

    2012-03-31

    The North Slope of Alaska has large (about 20 billion barrels) deposits of viscous oil in Ugnu, West Sak and Shraeder Bluff reservoirs. These shallow reservoirs overlie existing productive reservoirs such as Kuparuk and Milne Point. The viscosity of the Ugnu reservoir on top of Milne Point varies from 200 cp to 10,000 cp and the depth is about 3300 ft. The same reservoir extends to the west on the top of the Kuparuk River Unit and onto the Beaufort Sea. The depth of the reservoir decreases and the viscosity increases towards the west. Currently, the operators are testing cold heavy oil production with sand (CHOPS) in Ugnu, but oil recovery is expected to be low (< 10%). Improved oil recovery techniques must be developed for these reservoirs. The proximity to the permafrost is an issue for thermal methods; thus nonthermal methods must be considered. The objective of this project is to develop chemical methods for the Ugnu reservoir on the top of Milne Point. An alkaline-surfactant-polymer (ASP) formulation was developed for a viscous oil (330 cp) where as an alkaline-surfactant formulation was developed for a heavy oil (10,000 cp). These formulations were tested in one-dimensional and quarter five-spot Ugnu sand packs. Micromodel studies were conducted to determine the mechanisms of high viscosity ratio displacements. Laboratory displacements were modeled and transport parameters (such as relative permeability) were determined that can be used in reservoir simulations. Ugnu oil is suitable for chemical flooding because it is biodegraded and contains some organic acids. The acids react with injected alkali to produce soap. This soap helps in lowering interfacial tension between water and oil which in turn helps in the formation of macro and micro emulsions. A lower amount of synthetic surfactant is needed because of the presence of organic acids in the oil. Tertiary ASP flooding is very effective for the 330 cp viscous oil in 1D sand pack. This chemical formulation

  15. Chemical Methods for Ugnu Viscous Oils

    Energy Technology Data Exchange (ETDEWEB)

    Kishore Mohanty

    2012-03-31

    The North Slope of Alaska has large (about 20 billion barrels) deposits of viscous oil in Ugnu, West Sak and Shraeder Bluff reservoirs. These shallow reservoirs overlie existing productive reservoirs such as Kuparuk and Milne Point. The viscosity of the Ugnu reservoir on top of Milne Point varies from 200 cp to 10,000 cp and the depth is about 3300 ft. The same reservoir extends to the west on the top of the Kuparuk River Unit and onto the Beaufort Sea. The depth of the reservoir decreases and the viscosity increases towards the west. Currently, the operators are testing cold heavy oil production with sand (CHOPS) in Ugnu, but oil recovery is expected to be low (< 10%). Improved oil recovery techniques must be developed for these reservoirs. The proximity to the permafrost is an issue for thermal methods; thus nonthermal methods must be considered. The objective of this project is to develop chemical methods for the Ugnu reservoir on the top of Milne Point. An alkaline-surfactant-polymer (ASP) formulation was developed for a viscous oil (330 cp) where as an alkaline-surfactant formulation was developed for a heavy oil (10,000 cp). These formulations were tested in one-dimensional and quarter five-spot Ugnu sand packs. Micromodel studies were conducted to determine the mechanisms of high viscosity ratio displacements. Laboratory displacements were modeled and transport parameters (such as relative permeability) were determined that can be used in reservoir simulations. Ugnu oil is suitable for chemical flooding because it is biodegraded and contains some organic acids. The acids react with injected alkali to produce soap. This soap helps in lowering interfacial tension between water and oil which in turn helps in the formation of macro and micro emulsions. A lower amount of synthetic surfactant is needed because of the presence of organic acids in the oil. Tertiary ASP flooding is very effective for the 330 cp viscous oil in 1D sand pack. This chemical formulation

  16. Comparison of Methods for Protein Extraction from Pine Needles

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    Extraction of proteins from pine needles for proteomic analysis has long been a challenge for scientists. We compared three different protein extraction methods including sucrose, Tris-HCl and trichloroacetic acid (TCA)/acetone (TCA method) to determine their efficiency in separating pine needle proteins by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and two-dimensional PAGE (2D-PAGE). Proteins were then separated by SDS-PAGE. Among three methods the method using sucrose extraction buffer showed the highest efficiency and highest quality in separating proteins. In addition, clearer and more stable strips were detected by SDS-PAGE using sucrose extraction buffer. When the proteins extracted using sucrose extraction buffer were separated by 2D-PAGE, more than 300 protein spots, with isoelectric points (PI) ranging from 4.0 to 7.0 and molecular weights (MW) from 6.5 to 97.4 kD, were observed. This confirmed that the method with sucrose extraction buffer was an efficient and reliable method for extracting proteins from pine needles.

  17. Effects of Different Extraction Methods and Conditions on the Phenolic Composition of Mate Tea Extracts

    Directory of Open Access Journals (Sweden)

    Jelena Vladic

    2012-03-01

    Full Text Available A simple and rapid HPLC method for determination of chlorogenic acid (5-O-caffeoylquinic acid in mate tea extracts was developed and validated. The chromatography used isocratic elution with a mobile phase of aqueous 1.5% acetic acid-methanol (85:15, v/v. The flow rate was 0.8 mL/min and detection by UV at 325 nm. The method showed good selectivity, accuracy, repeatability and robustness, with detection limit of 0.26 mg/L and recovery of 97.76%. The developed method was applied for the determination of chlorogenic acid in mate tea extracts obtained by ethanol extraction and liquid carbon dioxide extraction with ethanol as co-solvent. Different ethanol concentrations were used (40, 50 and 60%, v/v and liquid CO2 extraction was performed at different pressures (50 and 100 bar and constant temperature (27 ± 1 °C. Significant influence of extraction methods, conditions and solvent polarity on chlorogenic acid content, antioxidant activity and total phenolic and flavonoid content of mate tea extracts was established. The most efficient extraction solvent was liquid CO2 with aqueous ethanol (40% as co-solvent using an extraction pressure of 100 bar.

  18. Extraction of lipids from microalgae by ultrasound application: prospection of the optimal extraction method.

    Science.gov (United States)

    Araujo, Glacio S; Matos, Leonardo J B L; Fernandes, Jader O; Cartaxo, Samuel J M; Gonçalves, Luciana R B; Fernandes, Fabiano A N; Farias, Wladimir R L

    2013-01-01

    Microalgae have the ability to grow rapidly, synthesize and accumulate large amounts (approximately 20-50% of dry weight) of lipids. A successful and economically viable algae based oil industry will depend on the selection of appropriate microalgal strains and the selection of the most suitable lipid extraction method. In this paper, five extraction methods were evaluated regarding the extraction of lipids from Chlorella vulgaris: Bligh and Dyer, Chen, Folch, Hara and Radin, and Soxhlet. Furthermore, the addition of silica powder was studied to evaluate the introduction of more shear stress to the system as to increase the disruption of cell walls. Among the studied methods, the Bligh and Dyer method assisted by ultrasound resulted in the highest extraction of oil from C. vulgaris (52.5% w/w). Addition of powder silica did not improve the extraction of oil. Copyright © 2012 Elsevier B.V. All rights reserved.

  19. Capacitive technology for energy extraction from chemical potential differences

    NARCIS (Netherlands)

    Bastos Sales, B.

    2013-01-01

    This thesis introduces the principle of Capacitive energy extraction based on Donnan Potential (CDP) to exploit salinity gradients. It also shows the fundamental characterization and improvements of CDP. An alternative application of this technology aimed at thermal gradients was tested.  

  20. extraction and physico chemical properties of some edible seed oils ...

    African Journals Online (AJOL)

    User

    Bayero Journal of Pure and Applied Sciences, 8(2): 239 - 244. Received: ... all in agreement with standard values of AOAC, (1990) which implies that the oil extracted from these seed samples can ..... International Journal of Food. Science and ...

  1. Authentication and chemical study of isodonis herba and isodonis extracts.

    Science.gov (United States)

    Maruyama, Takuro; Sugimoto, Naoki; Kuroyanagi, Masanori; Kim, Ik Hwi; Kamakura, Hiroyuki; Kawasaki, Takeshi; Fujita, Masao; Shimada, Hiroshi; Yamamoto, Yutaka; Tada, Atsuko; Yamazaki, Takeshi; Goda, Yukihiro

    2007-11-01

    Isodonis Herba is used as a Japanese dietary supplement and folk medicine. The extract of the herb (Isodonis extract) is also used as a food additive whose major compound is enmein (1). Here we compared internal transcribed spacer sequences of nuclear ribosomal DNA from Isodonis Herba available on the Japanese and Chinese crude drug markets, and found that the former derived from Isodon japonicus and Isodon trichocarpus, while the latter derived from distinct species such as Isodon eriocalyx. The liquid chromatography/mass spectrometry profiles of Isodonis Herba were classified into four chemotypes (A to D) according to the ratio of the major constituents. Types B and C contained 1 and oridonin (2) as major components, respectively. An intermediate (or mixed) form of types B and C in various ratios was designed type A. Type D contained eriocalyxin B (3) as its major component. Japanese herba were types A-C, while Chinese herba were types C and D. The commercial Isodonis extract products tested were classified as type D, suggesting that they originated from Chinese Herba. Understanding the relationship between extract constituents and DNA profiles is important for the official specification of dietary supplements and food additives of plant origin.

  2. Chemical Reactivity as Described by Quantum Chemical Methods

    Directory of Open Access Journals (Sweden)

    F. De Proft

    2002-04-01

    Full Text Available Abstract: Density Functional Theory is situated within the evolution of Quantum Chemistry as a facilitator of computations and a provider of new, chemical insights. The importance of the latter branch of DFT, conceptual DFT is highlighted following Parr's dictum "to calculate a molecule is not to understand it". An overview is given of the most important reactivity descriptors and the principles they are couched in. Examples are given on the evolution of the structure-property-wave function triangle which can be considered as the central paradigm of molecular quantum chemistry to (for many purposes a structure-property-density triangle. Both kinetic as well as thermodynamic aspects can be included when further linking reactivity to the property vertex. In the field of organic chemistry, the ab initio calculation of functional group properties and their use in studies on acidity and basicity is discussed together with the use of DFT descriptors to study the kinetics of SN2 reactions and the regioselectivity in Diels Alder reactions. Similarity in reactivity is illustrated via a study on peptide isosteres. In the field of inorganic chemistry non empirical studies of adsorption of small molecules in zeolite cages are discussed providing Henry constants and separation constants, the latter in remarkable good agreement with experiments. Possible refinements in a conceptual DFT context are presented. Finally an example from biochemistry is discussed : the influence of point mutations on the catalytic activity of subtilisin.

  3. Chemical optimization of protein extraction from sweet potato (Ipomoea batatas) peel

    Science.gov (United States)

    Proteins isolated from sweet potatoes (Ipomoea batatas) have been shown to possess antidiabetic, antioxidant, and antiproliferative properties. The objective of this study was to chemically optimize a process for extracting proteins from sweet potato peel. The extraction procedure involved mixing pe...

  4. Thermo-chemical extraction of fuel oil from waste lubricating grease.

    Science.gov (United States)

    Pilusa, Tsietsi Jefrey; Muzenda, Edison; Shukla, Mukul

    2013-06-01

    This study investigated the recovery of oil from waste grease through the process of thermal degradation in an aqueous solution of potassium hydroxide (KOH) followed by solvent extraction. Waste high temperature metal bearing grease was dissolved in a 15 w/w% KOH solution at 80°C while being agitated at 2000 rpm using a shear action agitator for a period of 15 min. Two distinct layers were observed after 8 min of settling time. The top layer being of dark brown oil and the bottom layer was a heterogeneous mixture. The two layers were separated by decantation. The bottom layer was cooled down to 45°C followed by slow addition of toluene (C7H8) while agitating at 1200 rpm for 15 min to prevent solids settling and minimise rapid volatilisation of the organic compounds in the mixture. Two distinct layers were also formed, the top homogeneous mixture of light brown oil-toluene mixture and the bottom sludge layer. The solvent was recovered from the oil for re-use by fractional distillation of the homogenous mixture. It was observed that 15 w/w% potassium hydroxide solution can chemically degrade the soap matrix in the grease and extract up to 49 w/w% of the fuel oil when subjected to high shear stress at a temperature of 80°C. The 26 w/w% extraction of oil in the remaining sludge was obtained by solvent extraction process with mass ratios of sludge to solvent of 2:1. Solvent recovery of 88% by mass was obtained via fractional distillation method. The combined extraction processes brought an overall oil yield of 75 w/w% from the waste grease. The fuel oil obtained from this process has similar properties to paraffin oil and can be blended with other oils as an alternative energy source.

  5. Comparison of DNA extraction methods for meat analysis.

    Science.gov (United States)

    Yalçınkaya, Burhanettin; Yumbul, Eylem; Mozioğlu, Erkan; Akgoz, Muslum

    2017-04-15

    Preventing adulteration of meat and meat products with less desirable or objectionable meat species is important not only for economical, religious and health reasons, but also, it is important for fair trade practices, therefore, several methods for identification of meat and meat products have been developed. In the present study, ten different DNA extraction methods, including Tris-EDTA Method, a modified Cetyltrimethylammonium Bromide (CTAB) Method, Alkaline Method, Urea Method, Salt Method, Guanidinium Isothiocyanate (GuSCN) Method, Wizard Method, Qiagen Method, Zymogen Method and Genespin Method were examined to determine their relative effectiveness for extracting DNA from meat samples. The results show that the salt method is easy to perform, inexpensive and environmentally friendly. Additionally, it has the highest yield among all the isolation methods tested. We suggest this method as an alternative method for DNA isolation from meat and meat products. Copyright © 2016 Elsevier Ltd. All rights reserved.

  6. Antioxidant and chemical properties of essential oil extracted from blend of selected spices

    Directory of Open Access Journals (Sweden)

    Ochuko Lucky Erukainure

    2015-07-01

    Full Text Available Objective: To investigate the chemical properties of essential oil extracted from blends of selected Nigerian spices as well as its antioxidant protective potentials against free radical in vitro. Methods: Essential oil was extracted from selected spices blend consisting of Monodora myristica, Myristica fragrans, Tetrapleura tetraptera, and Aframomum sceptrum using a Clevenger type apparatus. Oil obtained was subjected to phytochemical and gas chromatography-mass spectrometer analysis as well as analyzed for antioxidant activity which covers for 1,1-diphenyl-2 picrylhydrazyl, nitric oxide scavenging activities and reducing property. Results: Gas chromatography-mass spectrometer analysis revealed over 50 compoundfs with α-phellandrene being the most predominant compound (27.32%, which was followed by (--β-bourbonene (15.78% and 5-(1-methylethyl-α-phellandrene (11.80%. Phytochemical analysis showed high flavonoid content and a lower phenolic content. The oil showed a dose like dependent effect on the1-diphenyl-2 picrylhydrazyl and nitric oxide scavenging activities, these activities increased with increasing concentration. The same was also observed for the reducing power properties of the oil. Conclusions: The antioxidant activities exhibited by the essential oil in vitro signify its protective potential against free radicals. The chemical constituents, α-phellandrene in particular and the studied phytochemicals may be responsible for these effects. However, in vivo study is needed to further authenticate this potency.

  7. Antioxidant and chemical properties of essential oil extracted from blend of selected spices

    Institute of Scientific and Technical Information of China (English)

    Ochuko Lucky Erukainure; Funmi Olabisi Kayode; Olubanke Adetutu Adeyoju; Sunday Oluwaseun Adenekan; Godfrey Asieba; Atinuke Ajayi; Mosebolatan Victoria Adegbola; Bolanle Basirat Sarumi

    2015-01-01

    Objective:To investigate the chemical properties of essential oil extracted from blends of selected Nigerian spices as well as its antioxidant protective potentials against free radicalin vitro. Methods: Essential oil was extracted from selected spices blend consisting ofMonodora myristica, Myristica fragrans, Tetrapleura tetraptera, andAframomum sceptrum using a Clevenger type apparatus. Oil obtained was subjected to phytochemical and gas chromatography-mass spectrometer analysis as well as analyzed for antioxidant activity which covers for 1,1-diphenyl-2 picrylhydrazyl, nitric oxide scavenging activities and reducing property. Results: Gas chromatography-mass spectrometer analysis revealed over 50 compoundfs withα-phellandrene being the most predominant compound (27.32%), which was followed by (-)-β-bourbonene (15.78%) and 5-(1-methylethyl)-α-phellandrene (11.80%). Phytochemical analysis showed high flavonoid content and a lower phenolic content. The oil showed a dose like dependent effect on the1-diphenyl-2 picrylhydrazyl and nitric oxide scavenging activities, these activities increased with increasing concentration. The same was also observed for the reducing power properties of the oil. Conclusions: The antioxidant activities exhibited by the essential oilin vitro signify its protective potential against free radicals. The chemical constituents,α-phellandrene in particular and the studied phytochemicals may be responsible for these effects. However,in vivo study is needed to further authenticate this potency.

  8. Extractive Atmospheric Pressure Photoionization (EAPPI) Mass Spectrometry: Rapid Analysis of Chemicals in Complex Matrices

    Science.gov (United States)

    Liu, Chengyuan; Yang, Jiuzhong; Wang, Jian; Hu, Yonghua; Zhao, Wan; Zhou, Zhongyue; Qi, Fei; Pan, Yang

    2016-10-01

    Extractive atmospheric pressure photoionization (EAPPI) mass spectrometry was designed for rapid qualitative and quantitative analysis of chemicals in complex matrices. In this method, an ultrasonic nebulization system was applied to sample extraction, nebulization, and vaporization. Mixed with a gaseous dopant, vaporized analytes were ionized through ambient photon-induced ion-molecule reactions, and were mass-analyzed by a high resolution time-of-flight mass spectrometer (TOF-MS). After careful optimization and testing with pure sample solution, EAPPI was successfully applied to the fast screening of capsules, soil, natural products, and viscous compounds. Analysis was completed within a few seconds without the need for preseparation. Moreover, the quantification capability of EAPPI for matrices was evaluated by analyzing six polycyclic aromatic hydrocarbons (PAHs) in soil. The correlation coefficients ( R 2 ) for standard curves of all six PAHs were above 0.99, and the detection limits were in the range of 0.16-0.34 ng/mg. In addition, EAPPI could also be used to monitor organic chemical reactions in real time.

  9. Effect of Extraction Methods on Polysaccharide of Clitocybe maxima Stipe

    OpenAIRE

    Junchen Chen; Pufu Lai; Hengsheng Shen; Hengguang Zhen; Rutao Fang

    2013-01-01

    Clitocybe maxima (Gartn. ex Mey. Fr.) Quél. is a favorable edible fungi species. The proportion of its stipe is about 45% of entire fruit biomass, which is a low value defined byproduct. To increase its value added utilization, three extraction methods (as hot water, microwave-assisted and complex-enzyme-hydrolysis-assist) were conducted. The extraction effect on the polysaccharide of Clitocybe maxima stipe was compared and the processing conditions in extraction were optimized. The content o...

  10. Methods for microbial DNA extraction from soil for PCR amplification

    OpenAIRE

    Yeates C; Gillings, MR; Davison AD; Altavilla N; Veal DA

    1998-01-01

    Amplification of DNA from soil is often inhibited by co-purified contaminants. A rapid, inexpensive, large-scale DNA extraction method involving minimal purification has been developed that is applicable to various soil types (1). DNA is also suitable for PCR amplification using various DNA targets. DNA was extracted from 100g of soil using direct lysis with glass beads and SDS followed by potassium acetate precipitation, polyethylene glycol precipitation, phenol extraction and isopropanol pr...

  11. COMPARISON OF RNA EXTRACTION METHODS FOR Passiflora edulis SIMS LEAVES

    OpenAIRE

    2016-01-01

    ABSTRACT Functional genomic analyses require intact RNA; however, Passiflora edulis leaves are rich in secondary metabolites that interfere with RNA extraction primarily by promoting oxidative processes and by precipitating with nucleic acids. This study aimed to analyse three RNA extraction methods, Concert™ Plant RNA Reagent (Invitrogen, Carlsbad, CA, USA), TRIzol® Reagent (Invitrogen) and TRIzol® Reagent (Invitrogen)/ice -commercial products specifically designed to extract RNA, and...

  12. Heat-induced chemical and color changes of extractive-free Black Locust (Rosinia Pseudoacacia) wood

    Science.gov (United States)

    Yao Chen; Jianmin Gao; Yongming Fan; Mandla A. Tshabalala; Nicole M. Stark

    2012-01-01

    To investigate chemical and color changes of the polymeric constituents of black locust (Robinia pseudoacacia) wood during heat treatment, extractive-free wood flour was conditioned to 30% initial moisture content (MC) and heated for 24 h at 120 °C in either an oxygen or nitrogen atmosphere. The color change was measured using the CIELAB color system. Chemical changes...

  13. Chemical constituents and antimicrobial activity of the ethanol extracts obtained from the flower, leaf and stem of Salvia officinalis L.

    Directory of Open Access Journals (Sweden)

    MIHAILO S. RISTIC

    2003-01-01

    Full Text Available In this paper a comparison of the chemical composition and antimicrobial action of the ethanol extracts from the flower, leaf and stem of the herbal species Salvia officinalis L. (Lamiaceae, originating from the southeast region of Serbia was carried out. The chemical composition of the extracts was determined by GC-FID and GC-MS analyses. Manool has the highest level of all the components (9.0–11.1 %. Antimicrobial activity was determined by the diffusion and dilution method, whereby the latter one was modified by use of cellulose discs, and it was applied for the determination of the minimal inhibitory (MIC and minimal lethal concentrations (MLC. The leaf extract has a stronger antimicrobial activity than those of the flower and stem.

  14. Capacitive technology for energy extraction from chemical potential differences

    OpenAIRE

    Bastos Sales, B.

    2013-01-01

    This thesis introduces the principle of Capacitive energy extraction based on Donnan Potential (CDP) to exploit salinity gradients. It also shows the fundamental characterization and improvements of CDP. An alternative application of this technology aimed at thermal gradients was tested.   Chapter 2 introduces the principle and initial tests. The entropy increase of mixing two solutions of different salt concentrations can be harnessed to generate electrical energy. Worldwide, the potent...

  15. Methods for Evaluating Text Extraction Toolkits: An Exploratory Investigation

    Science.gov (United States)

    2015-01-22

    M T R 1 4 0 4 4 3 R 2 M I T R E T E C H N I C A L R E P O R T Methods for Evaluating Text Extraction Toolkits : An...JAN 2015 2. REPORT TYPE 3. DATES COVERED 00-00-2015 to 00-00-2015 4. TITLE AND SUBTITLE Methods for Evaluating Text Extraction Toolkits : An...contributes to closing this gap. We discuss an exploratory investigation into a method and a set of tools for evaluating a text extraction toolkit

  16. An efficient method for DNA extraction from Cladosporioid fungi

    NARCIS (Netherlands)

    Moslem, M.A.; Bahkali, A.H.; Abd-Elsalam, K.A.; Wit, de P.J.G.M.

    2010-01-01

    We developed an efficient method for DNA extraction from Cladosporioid fungi, which are important fungal plant pathogens. The cell wall of Cladosporioid fungi is often melanized, which makes it difficult to extract DNA from their cells. In order to overcome this we grew these fungi for three days on

  17. An efficient method for DNA extraction from Cladosporioid fungi

    NARCIS (Netherlands)

    Moslem, M.A.; Bahkali, A.H.; Abd-Elsalam, K.A.; Wit, de P.J.G.M.

    2010-01-01

    We developed an efficient method for DNA extraction from Cladosporioid fungi, which are important fungal plant pathogens. The cell wall of Cladosporioid fungi is often melanized, which makes it difficult to extract DNA from their cells. In order to overcome this we grew these fungi for three days on

  18. An Improved Method for Extraction and Separation of Photosynthetic Pigments

    Science.gov (United States)

    Katayama, Nobuyasu; Kanaizuka, Yasuhiro; Sudarmi, Rini; Yokohama, Yasutsugu

    2003-01-01

    The method for extracting and separating hydrophobic photosynthetic pigments proposed by Katayama "et al." ("Japanese Journal of Phycology," 42, 71-77, 1994) has been improved to introduce it to student laboratories at the senior high school level. Silica gel powder was used for removing water from fresh materials prior to extracting pigments by a…

  19. Characterization of rice starch and protein obtained by a fast alkaline extraction method.

    Science.gov (United States)

    Souza, Daiana de; Sbardelotto, Arthur Francisco; Ziegler, Denize Righetto; Marczak, Ligia Damasceno Ferreira; Tessaro, Isabel Cristina

    2016-01-15

    This study evaluated the characteristics of rice starch and protein obtained by a fast alkaline extraction method on rice flour (RF) derived from broken rice. The extraction was conducted using 0.18% NaOH at 30°C for 30min followed by centrifugation to separate the starch rich and the protein rich fractions. This fast extraction method allowed to obtain an isoelectric precipitation protein concentrate (IPPC) with 79% protein and a starchy product with low protein content. The amino acid content of IPPC was practically unchanged compared to the protein in RF. The proteins of the IPPC underwent denaturation during extraction and some of the starch suffered the cold gelatinization phenomenon, due to the alkaline treatment. With some modifications, the fast method can be interesting in a technological point of view as it enables process cost reduction and useful ingredients obtention to the food and chemical industries.

  20. A method for extracting $cos\\alpha$

    CERN Document Server

    Grinstein, B; Rothstein, I Z; Grinstein, Benjamin; Nolte, Detlef R.; Rothstein, Ira Z.

    2000-01-01

    We show that it is possible to extract the weak mixing angle alpha via a measurement of the rate for B^+(-) -> \\pi^+(-) e^+e^-. The sensitivity to cos(alpha) results from the interference between the long and short distance contributions. The short distance contribution can be computed, using heavy quark symmetry, in terms of semi-leptonic form factors. More importantly, we show that, using Ward identities and a short distance operator product expansion, the long distance contribution can be calculated without recourse to light cone wave functions when the invariant mass of the lepton pair, q^2, is much larger than LQCDs. We find that for q^2 > 2 GeV^2 the branching fraction is approximately 1 * 10^{-8}|V_{td}/0.008|^2. The shape of the differential rate is very sensitive to the value of cos(alpha) at small values of q^2 with dGamma /dq^2 varying up to 50% in the interval -1< cos(alpha)< 1 at q^2= 2 GeV^2. The size of the variation depends upon the ratio V_{ub}/V_{td}.

  1. A RAPID PCR-QUALITY DNA EXTRACTION METHOD IN FISH

    Institute of Scientific and Technical Information of China (English)

    LI Zhong; LIANG Hong-Wei; ZOU Gui-Wei

    2012-01-01

    PCR has been a general preferred method for biological research in fish, and previous research have enabled us to extract and purify PCR-quality DNA templates in laboratories[1-4]. The same problem among these procedures is waiting for tissue digesting for a long time. The overabundance time spent on PCR-quality DNA extraction restricts the efficiency of PCR assay, especially in large-scale PCR amplification, such as SSR-based genetic-mapping construction [5,6], identification of germ plasm resource[7,8] and evolution research [9,10], etc. In this study, a stable and rapid PCR-quality DNA extraction method was explored, using a modified alkaline lysis protocol. Extracting DNA for PCR only takes approximately 25 minutes. This stable and rapid DNA extraction method could save much laboratory time and promotes.%PCR has been a general preferred method for biological research in fish,and previous research have enabled us to extract and purify PCR-quality DNA templates in laboratories [1-4].The same problem among these procedures is waiting for tissue digesting for a long time.The overabundance time spent on PCR-quality DNA extraction restricts the efficiency of PCR assay,especially in large-scale PCR amplification,such as SSR-based genetic-mapping construction [5,6],identification of germ plasm resource[7,8] and evolution research [9,10],etc.In this study,a stable and rapid PCR-quality DNA extraction method was explored,using a modified alkaline lysis protocol.Extracting DNA for PCR only takes approximately 25 minutes.This stable and rapid DNA extraction method could save much laboratory time and promotes.

  2. [Study on the microwave extraction and chemical constituents of the essential oil from Amomum tsao-ko in Jinping, Yunnan province].

    Science.gov (United States)

    Yang, Lijuan; Zhang, Zheng; Li, Junfeng; Kong, Weiling; Lin, Jun

    2004-11-01

    Essential oil from Amomum tsao-ko collected in Jinping, Yunnan province was obtained by microwave extraction, common solvent extraction and vapor distillation, respectively. Chemical constituents were analyzed by GC-MS and their relative contents were determined by area-normalized method.

  3. Method for 236U Determination in Seawater Using Flow Injection Extraction Chromatography and Accelerator Mass Spectrometry

    DEFF Research Database (Denmark)

    Qiao, Jixin; Hou, Xiaolin; Steier, Peter;

    2015-01-01

    An automated analytical method implemented in a flow injection (FI) system was developed for rapid determination of 236U in 10 L seawater samples. 238U was used as a chemical yield tracer for the whole procedure, in which extraction chromatography (UTEVA) was exploited to purify uranium, after......, on the basis of studying the coprecipitation behavior of uranium with iron hydroxide. The analytical results indicate that the developed method is simple and robust, providing satisfactory chemical yields (80−100%) and high analysis speed (4 h/sample), which could be an appealing alternative to conventional...... manual methods for 236U determination in its tracer application....

  4. A comparison of DNA extraction methods using Petunia hybrida tissues.

    Science.gov (United States)

    Tamari, Farshad; Hinkley, Craig S; Ramprashad, Naderia

    2013-09-01

    Extraction of DNA from plant tissue is often problematic, as many plants contain high levels of secondary metabolites that can interfere with downstream applications, such as the PCR. Removal of these secondary metabolites usually requires further purification of the DNA using organic solvents or other toxic substances. In this study, we have compared two methods of DNA purification: the cetyltrimethylammonium bromide (CTAB) method that uses the ionic detergent hexadecyltrimethylammonium bromide and chloroform-isoamyl alcohol and the Edwards method that uses the anionic detergent SDS and isopropyl alcohol. Our results show that the Edwards method works better than the CTAB method for extracting DNA from tissues of Petunia hybrida. For six of the eight tissues, the Edwards method yielded more DNA than the CTAB method. In four of the tissues, this difference was statistically significant, and the Edwards method yielded 27-80% more DNA than the CTAB method. Among the different tissues tested, we found that buds, 4 days before anthesis, had the highest DNA concentrations and that buds and reproductive tissue, in general, yielded higher DNA concentrations than other tissues. In addition, DNA extracted using the Edwards method was more consistently PCR-amplified than that of CTAB-extracted DNA. Based on these results, we recommend using the Edwards method to extract DNA from plant tissues and to use buds and reproductive structures for highest DNA yields.

  5. Antimicrobial Activity and Chemical Composition of Three Essential Oils Extracted from Mediterranean Aromatic Plants.

    Science.gov (United States)

    Elshafie, Hazem S; Sakr, Shimaa; Mang, Stefania M; Belviso, Sandra; De Feo, Vincenzo; Camele, Ippolito

    2016-11-01

    There is a growing interest in essential oils (EOs) as possible alternatives for traditional chemical pesticides. This study was carried out to characterize the chemical composition of the three EOs extracted from Verbena officinalis, Majorana hortensis, and Salvia officinalis using gas chromatography (GC) and GC-mass spectrometry (GC-MS) and to evaluate in vitro their efficacy against some phyto or human pathogens. The antifungal activity was investigated against Colletotrichum acutatum and Botrytis cinerea in comparison with Azoxystrobin as a large spectrum fungicide. Antibacterial activity was evaluated against Bacillus megaterium, Bacillus mojavensis, and Clavibacter michiganensis (G+ve) and Escherichia coli, Xanthomonas campestris, Pseudomonas savastanoi, and P. syringae pv. phaseolicola (G-ve) compared to a synthetic antibiotic tetracycline. Minimum inhibitory concentration was evaluated against the above tested fungi using 96-well microplate method. Results showed that the chemical structure of the three studied EOs was mainly composed of monoterpene compounds and all oils belong to the chemotype carvacrol/thymol. Results of GC analysis identified 64 compounds, which were identified based on their mass to charge ratio. Furthermore, the different concentrations of studied EOs inhibited the growth of tested microorganism in a dose-dependent manner.

  6. Antioxidant property of water-soluble polysaccharides from Poria cocos Wolf using different extraction methods.

    Science.gov (United States)

    Wang, Nani; Zhang, Yang; Wang, Xuping; Huang, Xiaowen; Fei, Ying; Yu, Yong; Shou, Dan

    2016-02-01

    Poria cocos Wolf is a popular traditional medicinal plant that has invigorating activity. Water-soluble polysaccharides (PCPs) are its main active components. In this study, four different methods were used to extract PCPs, which include hot water extraction (PCP-H), ultrasonic-assisted extraction (PCP-U), enzyme-assisted extraction (PCP-E) and microwave-assisted extraction (PCP-M). Their chemical compositions and structure characterizations were compared. In vitro antioxidant activities were studied on the basis of DPPH radical, hydroxyl radical, reducing power and metal chelating ability. The results showed that PCPs were composed of mannose, glucose, galactose, and arabinose, and had typical IR spectra characteristics of polysaccharides. Compared with other PCPs, PCP-M had lower neutral sugar content, higher mannose content and higher uronic acid content. The molecular weight were determined as PCP-Ecocos Wolf.

  7. Microbial diversity in fecal samples depends on DNA extraction method

    DEFF Research Database (Denmark)

    Mirsepasi, Hengameh; Persson, Søren; Struve, Carsten

    2014-01-01

    BACKGROUND: There are challenges, when extracting bacterial DNA from specimens for molecular diagnostics, since fecal samples also contain DNA from human cells and many different substances derived from food, cell residues and medication that can inhibit downstream PCR. The purpose of the study...... was to evaluate two different DNA extraction methods in order to choose the most efficient method for studying intestinal bacterial diversity using Denaturing Gradient Gel Electrophoresis (DGGE). FINDINGS: In this study, a semi-automatic DNA extraction system (easyMag®, BioMérieux, Marcy I'Etoile, France......) and a manual one (QIAamp DNA Stool Mini Kit, Qiagen, Hilden, Germany) were tested on stool samples collected from 3 patients with Inflammatory Bowel disease (IBD) and 5 healthy individuals. DNA extracts obtained by the QIAamp DNA Stool Mini Kit yield a higher amount of DNA compared to DNA extracts obtained...

  8. String Variant Alias Extraction Method using Ensemble Learner

    Directory of Open Access Journals (Sweden)

    P.Selvaperumal

    2016-02-01

    Full Text Available String variant alias names are surnames which are string variant form of the primary name. Extracting string variant aliases are important in tasks such as information retrieval, information extraction, and name resolution etc. String variant alias extraction involves candidate alias name extraction and string variant alias validation. In this paper, string variant aliases are first extracted from the web and then using seven different string similarity metrics as features, candidate aliases are validated using ensemble classifier random forest. Experiments were conducted using string variant name-alias dataset containing name-alias data for 15 persons containing 30 name-alias pairs. Experimental results show that the proposed method outperforms other similar methods in terms of accuracy.

  9. comparison of protein extraction methods for the leaves of ficus ...

    African Journals Online (AJOL)

    F. I. Abdullah

    2017-05-01

    May 1, 2017 ... This study investigated several extraction methods for proteins from the leaves of Ficus .... found to be effective to remove plant lipids and pigments [22]. ... The addition of SDS as a solubilizing agent in the Tris buffered phenol.

  10. Comparison of four methods of DNA extraction from rice

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    @@ Polyphenols, teroens, and resins make it difficult to obtain high quality genomic DNA from rice. Four extraction methods were compared in our study, and CTAB precipitation was the most practical one.

  11. CD-REST: a system for extracting chemical-induced disease relation in literature

    Science.gov (United States)

    Xu, Jun; Wu, Yonghui; Zhang, Yaoyun; Wang, Jingqi; Lee, Hee-Jin; Xu, Hua

    2016-01-01

    Mining chemical-induced disease relations embedded in the vast biomedical literature could facilitate a wide range of computational biomedical applications, such as pharmacovigilance. The BioCreative V organized a Chemical Disease Relation (CDR) Track regarding chemical-induced disease relation extraction from biomedical literature in 2015. We participated in all subtasks of this challenge. In this article, we present our participation system Chemical Disease Relation Extraction SysTem (CD-REST), an end-to-end system for extracting chemical-induced disease relations in biomedical literature. CD-REST consists of two main components: (1) a chemical and disease named entity recognition and normalization module, which employs the Conditional Random Fields algorithm for entity recognition and a Vector Space Model-based approach for normalization; and (2) a relation extraction module that classifies both sentence-level and document-level candidate drug–disease pairs by support vector machines. Our system achieved the best performance on the chemical-induced disease relation extraction subtask in the BioCreative V CDR Track, demonstrating the effectiveness of our proposed machine learning-based approaches for automatic extraction of chemical-induced disease relations in biomedical literature. The CD-REST system provides web services using HTTP POST request. The web services can be accessed from http://clinicalnlptool.com/cdr. The online CD-REST demonstration system is available at http://clinicalnlptool.com/cdr/cdr.html. Database URL: http://clinicalnlptool.com/cdr; http://clinicalnlptool.com/cdr/cdr.html PMID:27016700

  12. A PCR amplification method without DNA extraction.

    Science.gov (United States)

    Li, Hongwei; Xu, Haiyue; Zhao, Chunjiang; Sulaiman, Yiming; Wu, Changxin

    2011-02-01

    To develop a simple and inexpensive method for direct PCR amplification of animal DNA from tissues, we optimized different components and their concentration in lysis buffer systems. Finally, we acquired the optimized buffer system composed of 10 mmol tris(hydroxymethyl)aminomethane (Tris)-Cl (pH 8.0), 2 mmol ethylene diamine tetraacetic (EDTA) (pH 8.0), 0.2 mol NaCl and 200 μg/mL Proteinase K. Interestingly, the optimized buffer is also very effective when working with common human sample types, including blood, buccal cells and hair. The direct PCR method requires fewer reagents (Tris-Cl, EDTA, Protease K and NaCl) and less incubation time (only 35 min). The cost of treating every sample is less than $0.02, and all steps can be completed on a thermal cycler in a 96-well format. So, the proposed method will significantly improve high-throughput PCR-based molecular assays in animal systems and in common human sample types.

  13. Safety in the Chemical Laboratory: Tested Disposal Methods for Chemical Wastes from Academic Laboratories.

    Science.gov (United States)

    Armour, M. A.; And Others

    1985-01-01

    Describes procedures for disposing of dichromate cleaning solution, picric acid, organic azides, oxalic acid, chemical spills, and hydroperoxides in ethers and alkenes. These methods have been tested under laboratory conditions and are specific for individual chemicals rather than for groups of chemicals. (JN)

  14. Forward gated-diode method for parameter extraction of MOSFETs*

    Institute of Scientific and Technical Information of China (English)

    Zhang Chenfei; Ma Chenyue; Guo Xinjie; Zhang Xiufang; He Jin; Wang Guozeng; Yang Zhang; Liu Zhiwei

    2011-01-01

    The forward gated-diode method is used to extract the dielectric oxide thickness and body doping concentration of MOSFETs, especially when both of the variables are unknown previously. First, the dielectric oxide thickness and the body doping concentration as a function of forward gated-diode peak recombination-generation (R-G) current are derived from the device physics. Then the peak R-G current characteristics of the MOSFETs with different dielectric oxide thicknesses and body doping concentrations are simulated with ISE-Dessis for parameter extraction. The results from the simulation data demonstrate excellent agreement with those extracted from the forward gated-diode method.

  15. A Robust Digital Watermark Extracting Method Based on Neural Network

    Institute of Scientific and Technical Information of China (English)

    GUOLihua; YANGShutang; LIJianhua

    2003-01-01

    Since watermark removal software, such as StirMark, has succeeded in washing watermarks away for most of the known watermarking systems, it is necessary to improve the robustness of watermarking systems. A watermark extracting method based on the error Back propagation (BP) neural network is presented in this paper, which can efficiently improve the robustness of watermarking systems. Experiments show that even if the watermarking systems are attacked by the StirMark software, the extracting method based on neural network can still efficiently extract the whole watermark information.

  16. Method for Extracting Product Information from TV Commercial

    Directory of Open Access Journals (Sweden)

    Kohei Arai

    2011-09-01

    Full Text Available Television (TV Commercial program contains important product information that displayed only in seconds. People who need that information has no insufficient time for noted it, even just for reading that information. This research work focus on automatically detect text and extract important information from a TV commercial to provide information in real time and for video indexing. We propose method for product information extraction from TV commercial using knowledge based system with pattern matching rule based method. Implementation and experiments on 50 commercial screenshot images achieved a high accuracy result on text extraction and information recognition.

  17. Total phenolic content,in vitro antioxidant activity and chemical composition of plant extracts from semiarid Mexican region

    Institute of Scientific and Technical Information of China (English)

    Jorge E Wong-Paz; Juan C Contreras-Esquivel; Ral Rodrguez-Herrera; Mara L Carrillo-Inungaray; Lluvia I Lpez; Guadalupe V Nevrez-Moorilln; Cristbal N Aguilar

    2015-01-01

    Objective:To determine the extraction suitable conditions of total phenolic content(TPC) by heat-reflux system, antioxidant activities andHPLC characterization of the aqueous-ethanolic extracts ofJatropha dioica (J. dioica)(Dragon’s blood),Flourensia cernua (F. cernua)(Tar bush), Eucalyptus camaldulensis(E. camaldulensis)(Eucalyptus) and Turnera diffusa (T. diffusa) (Damiana).Methods:TPC was evaluated by the well-known colorimetric assay usingFolin-Ciocalteu reagent.The antioxidant activities were assayed by three methods based on scavenging ofDPPH,ABTS and by lipid oxidation inhibition.The chemical composition of the extracts obtained was subject toHPLC analysis.Results:TPC in the plant extracts ranged from2.3 to 14.12 mg gallic acid equivalents/g for J. dioica and E. camaldulensis, respectively.The plant extracts ofF. cernua,E. camaldulensis andT. diffusa showed similar strong antioxidant activities on scavenging ofDPPH and lipid oxidation inhibition.In contrast,J. dioica extracts had lowest potential antioxidant in three assays used.HPLC assay showed the presence of several phenolic compounds in the extracts used.Conclusions:The results obtained suggest thatF. cernua, E. camaldulensis andT. diffusa are potential sources to obtain bioactive phenolic compounds with high antioxidant properties which can be used in the factories as antioxidant agents or for treatments in diseases.

  18. Method for 3D Airway Topology Extraction

    Directory of Open Access Journals (Sweden)

    Roman Grothausmann

    2015-01-01

    Full Text Available In lungs the number of conducting airway generations as well as bifurcation patterns varies across species and shows specific characteristics relating to illnesses or gene variations. A method to characterize the topology of the mouse airway tree using scanning laser optical tomography (SLOT tomograms is presented in this paper. It is used to test discrimination between two types of mice based on detected differences in their conducting airway pattern. Based on segmentations of the airways in these tomograms, the main spanning tree of the volume skeleton is computed. The resulting graph structure is used to distinguish between wild type and surfactant protein (SP-D deficient knock-out mice.

  19. Verification of chemical composition of commercially available propolis extracts by gas chromatography-mass spectrometry analysis.

    Science.gov (United States)

    Czyżewska, Urszula; Konończuk, Joanna; Teul, Joanna; Drągowski, Paweł; Pawlak-Morka, Renata; Surażyński, Arkadiusz; Miltyk, Wojciech

    2015-05-01

    Propolis is a resin that is collected by honeybees from various plant sources. Due to its pharmacological properties, it is used in commercial production of nutritional supplements in pharmaceutical industry. In this study, gas chromatography-mass spectrometry was applied for quality control analysis of the three commercial specimens containing aqueous-alcoholic extracts of bee propolis. More than 230 constituents were detected in analyzed products, including flavonoids, chalcones, cinnamic acids and their esters, phenylpropenoid glycerides, and phenylpropenoid sesquiterpenoids. An allergenic benzyl cinnamate ester was also identified in all tested samples. This analytical method allows to evaluate biological activity and potential allergenic components of bee glue simultaneously. Studies on chemical composition of propolis samples may provide new approach to quality and safety control analysis in production of propolis supplementary specimens.

  20. Lipid extraction methods from microalgal biomass harvested by two different paths: screening studies toward biodiesel production.

    Science.gov (United States)

    Ríos, Sergio D; Castañeda, Joandiet; Torras, Carles; Farriol, Xavier; Salvadó, Joan

    2013-04-01

    Microalgae can grow rapidly and capture CO2 from the atmosphere to convert it into complex organic molecules such as lipids (biodiesel feedstock). High scale economically feasible microalgae based oil depends on optimizing the entire process production. This process can be divided in three very different but directly related steps (production, concentration, lipid extraction and transesterification). The aim of this study is to identify the best method of lipid extraction to undergo the potentiality of some microalgal biomass obtained from two different harvesting paths. The first path used all physicals concentration steps, and the second path was a combination of chemical and physical concentration steps. Three microalgae species were tested: Phaeodactylum tricornutum, Nannochloropsis gaditana, and Chaetoceros calcitrans One step lipid extraction-transesterification reached the same fatty acid methyl ester yield as the Bligh and Dyer and soxhlet extraction with n-hexane methods with the corresponding time, cost and solvent saving. Copyright © 2013 Elsevier Ltd. All rights reserved.

  1. Comparison of Artemisia annua bioactivities between traditional medicine and chemical extracts

    KAUST Repository

    Nageeb, Ahmed

    2014-04-04

    The present work investigates the efficacy of using Artemisia annua in traditional medicine in comparison with chemical extracts of its bioactive molecules. In addition, the effects of location (Egypt and Jericho) on the bioactivities of the plant were investigated. The results showed that water extracts of Artemisia annua from Jericho have stronger antibacterial activities than organic solvent extracts. In contrast, water and organic solvent extracts of the Artemisia annua from Egypt do not have anti-bacterial activity. Furthermore, while the methanol extract of EA displayed high anticancer affects, the water extract of Egypt and the extracts of Jericho did not show significant anticancer activity. Finally, the results showed that the methanol and water extracts of Jericho had the highest antioxidant activity, while the extracts of Egypt had none. The current results validate the scientific bases for the use of Artemisia annua in traditional medicine. In addition, our results suggest that the collection location of the Artemisia annua has an effect on its chemical composition and bioactivities. - See more at: http://www.eurekaselect.com/121416/article#sthash.2c2j9AoL.dpuf

  2. A Circular Statistical Method for Extracting Rotation Measures

    Indian Academy of Sciences (India)

    S. Sarala; Pankaj Jain

    2002-03-01

    We propose a new method for the extraction of Rotation Measures from spectral polarization data. The method is based on maximum likelihood analysis and takes into account the circular nature of the polarization data. The method is unbiased and statistically more efficient than the standard 2 procedure.

  3. Chemical Characterization and Cytoprotective Effect of the Hydroethanol Extract from Annona coriacea Mart. (Araticum)

    Science.gov (United States)

    Júnior, José G. A. S.; Coutinho, Henrique D. M.; Boris, Ticiana C. C.; Cristo, Janyketchuly S.; Pereira, Nara L. F.; Figueiredo, Fernando G.; Cunha, Francisco A. B.; Aquino, Pedro E. A.; Nascimento, Polyana A. C.; Mesquita, Francisco J. C.; Moreira, Paulo H. F.; Coutinho, Sáskia T. B.; Souza, Ivon T.; Teixeira, Gabriela C.; Ferreira, Najla M. N.; Farina, Eleonora O.; Torres, Cícero M. G.; Holanda, Vanderlan N.; Pereira, Vandbergue S.; Guedes, Maria I. F.

    2016-01-01

    Introduction: Annona coriacea Mart. (araticum) is a widely distributed tree in the cerrado. Its value is attributed principally to the consumption of its fruit which possesses a large nutritive potential. The objective was to identify the chemical profile and evaluate the antimicrobial and cytoprotective activity of the hydroethanol extract of A. coriacea Mart. (HEAC) leaves against the toxicity of mercury chloride. Materials and Methods: The characterization of components was carried out using high-performance liquid chromatography (HPLC). The minimum inhibitory concentration (MIC) was determined by microdilution method in broth with strains of Staphylococcus aureus, Escherichia coli, and Pseudomonas aeruginosa. For evaluation of the modulatory and cytoprotective activity of aminoglycoside antibiotics (gentamicin and amikacin) and mercury chloride (HgCl2), the substances were associated with the HEAC at subinhibitory concentrations (MIC/8). Results and Discussion: The HPLC analysis revealed the presence of flavonoids such as Luteolin (1.84%) and Quercetin (1.19%) in elevated concentrations. The HEAC presented an MIC ≥512 μg/mL and significant antagonistic action in aminoglycosides modulation, and it also showed cytoprotective activity to S. aureus (significance P metal with significance, this action being attributed to the chelating properties of the flavonoids found in the chemical identification. Conclusions: The results acquired in this study show that the HEAC presents cytoprotective activity over the tested strains in vitro and can also present antagonistic effect when associated with aminoglycosides, reinforcing the necessity of taking caution when combining natural and pharmaceutical products. SUMMARY The hydroalcoholic extract of A. coriacea Mart. presents in vitro cytoprotective activity against the toxic effect of Hg. Abbreviations Used: HPLC-DAD: High-performance liquid chromatography with a diode array detector; MIC: Minimum inhibitory concentration

  4. Evaluation of different extraction methods from Albizia Julibrissin Durazz Leaves in reducing nausea in chickens

    OpenAIRE

    Shaki

    2016-01-01

    Introduction:Albizia Julibrissin, have been used for treatment of insomnia, anxiety and depression in traditional medicine. Considering the adverse effects of chemical drugs used as anti-nausea, in this study we investigated the potential beneficial effects of Albizia Julibrissin in reducing nausea in chicken model. Methods: In this experimental study,Albizia Julibrissin was collected from the forests of Mazandaran. Its methanolic extract was prepared using different methods in...

  5. Comparing extraction buffers to identify optimal method to extract somatic coliphages from sewage sludges.

    Science.gov (United States)

    Murthi, Poornima; Praveen, Chandni; Jesudhasan, Palmy R; Pillai, Suresh D

    2012-08-01

    Somatic coliphages are present in high numbers in sewage sludge. Since they are conservative indicators of viruses during wastewater treatment processes, they are being used to evaluate the effectiveness of sludge treatment processes. However, efficient methods to extract them from sludge are lacking. The objective was to compare different virus extraction procedures and develop a method to extract coliphages from sewage sludge. Twelve different extraction buffers and procedures varying in composition, pH, and sonication were compared in their ability to recover indigenous phages from sludges. The 3% buffered beef extract (BBE) (pH 9.0), the 10% BBE (pH 9.0), and the 10% BBE (pH 7.0) with sonication were short-listed and their recovery efficiency was determined using coliphage-spiked samples. The highest recovery was 16% for the extraction that involved 10% BBE at pH 9.0. There is a need to develop methods to extract somatic phages from sludges for monitoring sludge treatment processes.

  6. Quality Control Guidelines for SAM Chemical Methods

    Science.gov (United States)

    Learn more about quality control guidelines and recommendations for the analysis of samples using the chemistry methods listed in EPA's Selected Analytical Methods for Environmental Remediation and Recovery (SAM).

  7. An experimental design approach to the chemical characterisation of pectin polysaccharides extracted from Cucumis melo Inodorus.

    Science.gov (United States)

    Denman, Laura J; Morris, Gordon A

    2015-03-06

    Extracted pectins have been utilised in a number of applications in both the food and pharmaceutical industries where they are generally used as gelling agents, thickeners and stabilisers, although a number of pectins have been shown to be bioactive. These functional properties will depend upon extraction conditions. A statistical experimental design approach was used to study the effects of extraction conditions pH, time and temperature on pectins extracted from Cucumis melo Inodorus. The results show that the chemical composition is very sensitive to these conditions and that this has a great influence on for example the degree of branching. Higher temperatures, lower pHs and longer extraction times lead to a loss of the more acid labile arabinofuranose residues present on the pectin side chain. The fitting of regression equations relating yield and composition to extraction conditions can therefore lead to tailor-made pectins for specific properties and/or applications.

  8. A Karnaugh-Map based fingerprint minutiae extraction method

    Directory of Open Access Journals (Sweden)

    Sunil Kumar Singla

    2010-07-01

    Full Text Available Fingerprint is one of the most promising method among all the biometric techniques and has been used for thepersonal authentication for a long time because of its wide acceptance and reliability. Features (Minutiae are extracted fromthe fingerprint in question and are compared with the features already stored in the database for authentication. Crossingnumber (CN is the most commonly used minutiae extraction method for fingerprints. In this paper, a new Karnaugh-Mapbased fingerprint minutiae extraction method has been proposed and discussed. In the proposed algorithm the 8 neighborsof a pixel in a 33 window are arranged as 8 bits of a byte and corresponding hexadecimal (hex value is calculated. Thesehex values are simplified using standard Karnaugh-Map (K-map technique to obtain the minimized logical expression.Experiments conducted on the FVC2002/Db1_a database reveals that the developed method is better than the crossingnumber (CN method.

  9. Extraction and chemical characterization of starch from S. lycocarpum fruits.

    Science.gov (United States)

    Pascoal, Aline M; Di-Medeiros, Maria Carolina B; Batista, Karla A; Leles, Maria Inês Gonçalves; Lião, Luciano Moraes; Fernandes, Kátia F

    2013-11-06

    In this study the pulp from Solanum lycocarpum fruits was used as raw material for extraction of starch, resulting in a yield of 51%. The starch granules were heterogeneous in size, presenting a conical appearance, very similar to a high-amylose cassava starch. The elemental analysis (CHNS) revealed 64.33% carbon, 7.16% hydrogen and 0.80% nitrogen. FT-IR spectroscopy showed characteristic peaks of polysaccharides and NMR analysis confirmed the presence of the α-anomer of d-glucose. The S. lycocarpum starch was characterized by high value of intrinsic viscosity (3515 mPa s) and estimated molecular weight around 645.69 kDa. Furthermore, this starch was classified as a B-type and high amylose content starch, presenting 34.66% of amylose and 38% crystallinity. Endothermic transition temperatures (To=61.25 °C, Tp=64.5 °C, Tc=67.5 °C), gelatinization temperature (ΔT=6.3 °C) ranges and enthalpy changes (ΔH=13.21 J g(-1)) were accessed by DCS analysis. These results make the S. lycocarpum fruit a very promising source of starch for biotechnological applications. Copyright © 2013 Elsevier Ltd. All rights reserved.

  10. Gold-plating of Mylar lift films to capitalize on surface enhanced Raman spectroscopy for chemical extraction of drug residues.

    Science.gov (United States)

    Fox, James D; Waverka, Kristin N; Verbeck, Guido F

    2012-03-10

    The method of residue extraction through electrostatic lifting provides a distinctive mode of performing ultra-trace analysis. These lifts provide a medium for analyte extraction via nanomanipulation-coupled to nanospray ionization-mass spectrometry (NSI-MS). This method of extraction can be coupled to Raman spectroscopy for supplemental verification of analytes using surface enhanced Raman scattering (SERS). The gold surface used for SERS provides an enhanced effect on peak signal intensity allowing ultra-trace amounts to be detected more effectively. The aim of this research is to utilize gold-coated films with electrostatic lifting in order to collect latent materials and analyze chemicals of interest contained in them via SERS.

  11. Comparison of extraction methods for quantifying vitamin E from animal tissues.

    Science.gov (United States)

    Xu, Zhimin

    2008-12-01

    Four extraction methods: (1) solvent (SOL), (2) ultrasound assisted solvent (UA), (3) saponification and solvent (SP), and (4) saponification and ultrasound assisted solvent (SP-UA), were used in sample preparation for quantifying vitamin E (tocopherols) in chicken liver and plasma samples. The extraction yields of SOL, UA, SP, and SP-UA methods obtained by adding delta-tocopherol as internal reference were 95%, 104%, 65%, and 62% for liver and 98%, 103%, 97%, and 94% for plasma, respectively. The methods with saponification significantly affected the stabilities of tocopherols in liver samples. The measured values of alpha- and gamma-tocopherols using the solvent only extraction (SOL) method were much lower than that using any of the other extraction methods. This indicated that less of the tocopherols in those samples were in a form that could be extracted directly by solvent. The measured value of alpha-tocopherol in the liver sample using the ultrasound assisted solvent (UA) method was 1.5-2.5 times of that obtained from the saponification and solvent (SP) method. The differences in measured values of tocopherols in the plasma samples by using the two methods were not significant. However, the measured value of the saponification and ultrasound assisted solvent (SP-UA) method was lower than either the saponification and solvent (SP) or the ultrasound assisted solvent (UA) method. Also, the reproducibility of the ultrasound assisted solvent (UA) method was greater than any of the saponification methods. Compared with the traditional saponification method, the ultrasound assisted solvent method could effectively extract tocopherols from sample matrix without any chemical degradation reactions, especially for complex animal tissue such as liver.

  12. New Coke Oven Facilities at Linhuan Coal Chemical Company Adopt LyondellBasell's Aromatics Extraction Process

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    @@ The new 80 kt/a coal chemical unit at the Linhuan Coal Chemical Company in Anhui province will adopt the aro-matics extraction process licensed by LyondellBasell Company. This unit is expected to come on stream by 2009.This technology is suitable for manufacture of high-purity aromatics with broad adaptability and large scale produc-tion capability. In the previous year LyondellBasell was awarded six patents on aromatics extraction process. It is told that the achievements to be adopted by the Linhuan Coal Chemical Company are partly a series of aromatics extrac-tion processes for recovery of coke oven light oil performed by LyondellBasell.

  13. Chitin Extraction from Crustacean Shells Using Biological Methods – A Review

    Directory of Open Access Journals (Sweden)

    Wassila Arbia

    2013-01-01

    Full Text Available After cellulose, chitin is the most widespread biopolymer in nature. Chitin and its derivatives have great economic value because of their biological activities and their industrial and biomedical applications. It can be extracted from three sources, namely crustaceans, insects and microorganisms. However, the main commercial sources of chitin are shells of crustaceans such as shrimps, crabs, lobsters and krill that are supplied in large quantities by the shellfish processing industries. Extraction of chitin involves two steps, demineralisation and deproteinisation, which can be conducted by two methods, chemical or biological. The chemical method requires the use of acids and bases, while the biological method involves microorganisms. Although lactic acid bacteria are mainly applied, other microbial species including proteolytic bacteria have also been successfully implemented, as well as mixed cultures involving lactic acid-producing bacteria and proteolytic microorganisms. The produced lactic acid allows shell demineralisation, since lactic acid reacts with calcium carbonate, the main mineral component, to form calcium lactate.

  14. METHOD DEVELOPMENT FOR THE ANALYSIS OF N-NITROSODIMETHYLAMINE AND OTHER N-NITROSAMINES IN DRINKING WATER AT LOW NANOGRAM/LITER CONCENTRATIONS USING SOLID PHASE EXTRACTION AND GAS CHROMATOGRAPHY WITH CHEMICAL IONIZATION TANDEM MASS SPECTROMETRY

    Science.gov (United States)

    N-Nitrosodimethylamine (NDMA) is a probable human carcinogen that has been identified as a drinking water contaminant of concern. United States Environmental Protection Agency (USEPA) Method 521 has been developed for the analysis of NDMA and six additional N-nitrosamines in dri...

  15. Iron oxide functionalized graphene nano-composite for dispersive solid phase extraction of chemical warfare agents from aqueous samples.

    Science.gov (United States)

    Chinthakindi, Sridhar; Purohit, Ajay; Singh, Varoon; Tak, Vijay; Goud, D Raghavender; Dubey, D K; Pardasani, Deepak

    2015-05-15

    Present study deals with the preparation and evaluation of graphene based magnetic nano-composite for dispersive solid phase extraction of Chemical Weapons Convention (CWC) relevant chemicals from aqueous samples. Nano-composite, Fe3O4@SiO2-G was synthesized by covalently bonding silica coated Fe3O4 onto the graphene sheets. Nerve agents (NA), Sulfur mustard (SM) and their non-toxic environmental markers were the target analytes. Extraction parameters like amount of sorbent, extraction time and desorption conditions were optimized. Dispersion of 20 milligram of sorbent in 200mL of water sample for 20min. followed by methanol/chloroform extraction produced average to good recoveries (27-94%) of targeted analytes. Recoveries of real agents exhibited great dependency upon sample pH and ionic strength. Sarin produced maximum recovery under mild acidic conditions (56% at pH 5) while VX demanded alkaline media (83% at pH 9). Salts presence in the aqueous samples was found to be advantageous, raising the recoveries to as high as 94% for SM. Excellent limits of detection (LOD) for sulphur mustard and VX (0.11ngmL(-1) and 0.19ngmL(-1) respectively) proved the utility of the developed method for the off-site analysis of CWC relevant chemicals.

  16. Phase extraction based on sinusoidal extreme strip phase shifting method

    Science.gov (United States)

    Hui, Mei; Liu, Ming; Dong, Liquan; Liu, Xiaohua; Zhao, Yuejin

    2015-08-01

    Multiple synthetic aperture imaging can enlarge pupil diameter of optical systems, and increase system resolution. Multiple synthetic aperture imaging is a cutting-edge topic and research focus in recent years, which is prospectively widely applied in fields like astronomical observations and aerospace remote sensing. In order to achieve good imaging quality, synthetic aperture imaging system requires phase extraction of each sub-aperture and co-phasing of whole aperture. In the project, an in-depth study about basic principles and methods of segments phase extraction was done. The study includes: application of sinusoidal extreme strip light irradiation phase shift method to extract the central dividing line to get segment phase extraction information, and the use of interference measurement to get the aperture phase extraction calibration coefficients of spherical surface. Study about influence of sinusoidal extreme strip phase shift on phase extraction, and based on sinusoidal stripe phase shift from multiple linear light sources of the illumination reflected image, to carry out the phase shift error for inhibiting the effect in the phase extracted frame.

  17. Chemical Analysis Methods for Silicon Carbide

    Institute of Scientific and Technical Information of China (English)

    Shen Keyin

    2006-01-01

    @@ 1 General and Scope This Standard specifies the determination method of silicon dioxide, free silicon, free carbon, total carbon, silicon carbide, ferric sesquioxide in silicon carbide abrasive material.

  18. A Novel Method of Genomic DNA Extraction for Cactaceae

    OpenAIRE

    Fehlberg, Shannon D.; Jessica M. Allen; Kathleen Church

    2013-01-01

    • Premise of the study: Genetic studies of Cactaceae can at times be impeded by difficult sampling logistics and/or high mucilage content in tissues. Simplifying sampling and DNA isolation through the use of cactus spines has not previously been investigated. • Methods and Results: Several protocols for extracting DNA from spines were tested and modified to maximize yield, amplification, and sequencing. Sampling of and extraction from spines resulted in a simplified protocol overall and compl...

  19. Isolation, fractionation and identification of chemical constituents from the leaves crude extracts of Mentha piperita L grown in Sultanate of Oman

    Institute of Scientific and Technical Information of China (English)

    Mohammad Amzad Hossain; Seham Salim Al-Hdhrami; Afaf Mohammed Weli; Qasim Al-Riyami; Jamal Nasser Al-Sabahi

    2014-01-01

    Objective: To analyze and identify the chemical compositions of different organic plants crude extracts of Mentha piperita (M. piperita) grown in Sultanate of Oman by gas chromatography-mass spectrometry (GC-MS). Methods: The powder sample was extracted with methanol by using Soxhlet extractor. Methanol crude extracts of M. piperita and its derived fractions of hexane, chloroform, ethyl acetate and butanol were prepared.Results:MS showed that majority of these compounds are bioactive.Conclusions:According to the results of the present study, the plant crude extracts could be Qualitative analyses of various organic plant crude extracts of M. piperita by using GC-used as medicine for the treatment of different diseases. The analysis and identification of the chemical compounds in the plant crude extracts by using GC-MS was the first time.

  20. [Comparison of Chemical Components of Essential Oil from Ocimum basilicum var. pilosum Extracted by Supercritical CO2 Fluid and Steam Distillation].

    Science.gov (United States)

    Wang, Zhao-yu; Zheng, Jia-huan; Shi, Sheng-ying; Luo, Zhi-xiong; Ni, Shun-yu; Lin, Jing-ming

    2015-11-01

    To compare the chemical components of essential oil prepared by steam distillation extraction (SD) and supercritical CO2 fluid extraction (SFE-CO2) from Ocimum basilicum var. pilosum whole plant. The essential oil of Ocimum basilicum var. pilosum were extracted by SD and SFE-CO2. The chemical components of essential oil were separated and analyzed by gas chromatography-mass spectrometry( GC-MS). Their relative contents were determined by normalization of peak area. 40 and 42 compounds were detected in the essential oil prepared by SD and SFE-CO2 respectively. 25 compounds were common. Thereare significant differences of the chemical components between the Ocimum basilicum var. pilosum essential oil prepared by SD and thatby SFE-CO2. Different methods showed different extraction efficiency with a special compound. It might be a good idea to unite several methods in the modern traditional Chinese medicine industry.

  1. Comparative spectroscopic analysis of urinary calculi inhibition by Larrea Tridentata infusion and NDGA chemical extract

    Science.gov (United States)

    Manciu, Felicia

    2012-10-01

    In the present comparative spectroscopic study we try to understand calcium oxalate kidney stone formation as well as its inhibition by using a traditional medicine approach with Larrea Tridentata (LT) herbal extracts and nordihydroguaiaretic acid (NDGA), which is a chemical extract of the LT bush. The samples were synthesized without and with LT or NDGA using a simplified single diffusion gel growth technique. While the use of infusion from LT decreases the sizes of calcium oxalate crystals and also changes their structure from monohydrate for pure crystals to dihydrate for crystals grown with different amounts of inhibitor, both Raman and infrared absorption spectroscopic techniques, which are the methods of analysis employed in this work, reveal that NDGA is not responsible for the change in the morphology of calcium oxalate crystals and does not contribute significantly to the inhibition process. The presence of NDGA slightly affects the structure of the crystals by modifying the strength of the C-C bonds as seen in the Raman data. Also, the current infrared absorption results demonstrate the presence of NDGA in the samples through a vibrational line that corresponds to the double bond between carbon atoms of the ester group of NDGA.

  2. Chemical characterization and evaluation of biological activity of Cynara cardunculus extractable compounds

    OpenAIRE

    Ramos, Patrícia Alexandra Bogango

    2015-01-01

    The Mediterranean species Cynara cardunculus L. is recognized in the traditional medicine, for their hepatoprotective and choleretic effects. Biomass of C. cardunculus L. var. altilis (DC), or cultivated cardoon, may be explored not only for the production of energy and pulp fibers, but also for the extraction of bioactive compounds. The chemical characterization of extractable components, namely terpenic and phenolic compounds, may valorize the cultivated cardoon plantation, due to their ant...

  3. Supercritical CO2 extract and essential oil of bay (Laurus nobilis L. – chemical composition and antibacterial activity

    Directory of Open Access Journals (Sweden)

    JASNA IVANOVIĆ

    2010-03-01

    Full Text Available The present study deals with the supercritical carbon dioxide (SC-CO2 extraction and hydrodistillation (HD of dried bay leaves (Laurus nobilis L.. The chemical composition and antibacterial activity of the SC-CO2 extract and essential oil (EO from dried leaves of bay were compared to each other and literature data. Qualitative and quantitative analyses of the SC-CO2 extract and EO were performed using GC–FID and GC–MS analytical methods. A significant difference in the chemical composition of the SC-CO2 extract and EO was observed. The EO comprised high contents of monoterpenes and their oxygenated derivates (98.4 %, principally 1,8-cineole (33.4 %, linalool (16.0 % and α-terpinyl acetate (13.8 %, sabinene (6.91 % and methyl eugenol (5.32 %. The SC-CO2 extract comprised twice less monoterpenes and their oxygenated derivates (43.89 %, together with sesquiterpenes (12.43 %, diterpenes (1.33 % and esters (31.13 %. The major components were methyl linoleate (16.18 %, α-terpinyl acetate (12.88 %, linalool (9.00 %, methyl eugenol (8.67 %, methyl arachidonate (6.28 % and eugenol (6.14 %. An investigation of the antibacterial activity of bay SC-CO2 extract and EO was completed on different Staphylococcus strains using the broth macrodilution method. Staphylococcus intermedius strains were the most susceptible to both the SC-CO2 extract and EO (MIC = 640 µg/ml.

  4. A New Method to Extract Text from Natural Scenes

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    This paper presents a new method for text detection, location and binarization fron natural scenes. Several morphological steps are used to detect the general positian of the text, including English, Chinese and Japanese characters. Next bounding boxes are processed by a new "Expand, Break and Merge" (EBM) method to get the precise text areas. Finally, text is binarized by a hybrid method based on Otsu and Niblack. This new approach can extract different kinds of text from complicated natural scenes. It is insensitive to noise, distortedness, and text orientation. It also has good performance on extracting texts in various sizes.

  5. A simplified method for extracting androgens from avian egg yolks

    Science.gov (United States)

    Kozlowski, C.P.; Bauman, J.E.; Hahn, D.C.

    2009-01-01

    Female birds deposit significant amounts of steroid hormones into the yolks of their eggs. Studies have demonstrated that these hormones, particularly androgens, affect nestling growth and development. In order to measure androgen concentrations in avian egg yolks, most authors follow the extraction methods outlined by Schwabl (1993. Proc. Nat. Acad. Sci. USA 90:11446-11450). We describe a simplified method for extracting androgens from avian egg yolks. Our method, which has been validated through recovery and linearity experiments, consists of a single ethanol precipitation that produces substantially higher recoveries than those reported by Schwabl.

  6. Selected bibliography for the extraction of uranium from seawater: chemical process and plant design feasibility study

    Energy Technology Data Exchange (ETDEWEB)

    Binney, S.E.; Polkinghorne, S.T.; Jante, R.R.; Rodman, M.R.; Chen, A.C.T.; Gordon, L.I.

    1979-02-01

    A selected annotated bibliography of 521 references was prepared as a part of a feasibility study of the extraction of uranium from seawater. For the most part, these references are related to the chemical processes whereby the uranium is removed from the seawater. A companion docment contains a similar bibliography of 471 references related to oceanographic and uranium extraction plant siting considerations, although some of the references are in common. The bibliography was prepared by computer retrieval from Chemical Abstracts, Nuclear Science Abstracts, Energy Data Base, NTIS, and Oceanic Abstracts. References are listed by author, country of author, and selected keywords.

  7. Anionic Extraction for Efficient Recovery of Biobased 2,3-Butanediol-A Platform for Bulk and Fine Chemicals.

    Science.gov (United States)

    Drabo, Peter; Tiso, Till; Heyman, Benedikt; Sarikaya, Eda; Gaspar, Paula; Förster, Jochen; Büchs, Jochen; Blank, Lars Mathias; Delidovich, Irina

    2017-08-24

    2,3-Butanediol (BDO) presents a promising platform molecule for the synthesis of basic and fine chemicals. Biotechnological production of BDO from renewable resources with living microbes enables high concentrations in the fermentation broth. The recovery of high-boiling BDO from an aqueous fermentation broth presents a subsequent challenge. A method is proposed for BDO isolation based on reversible complexation with phenylboronate in an anionic complex. BDO can be recovered by back-extraction into an acidic solution. The composition of the extracted species was determined by NMR spectroscopy, MS, and GC-MS methods. The conditions of extraction and back-extraction were optimized by using commercial BDO and finally applied to different fermentation broths. Up to 72-93 % BDO can be extracted and up to 80-90 % can be back-extracted under the optimized conditions. Purified bio-BDO was used in the presence of sulfuric acid for the synthesis of methyl ethyl ketone, an established organic solvent and discussed tailor-made biofuel. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  8. A silica gel based method for extracting insect surface hydrocarbons.

    Science.gov (United States)

    Choe, Dong-Hwan; Ramírez, Santiago R; Tsutsui, Neil D

    2012-02-01

    Here, we describe a novel method for the extraction of insect cuticular hydrocarbons using silica gel, herein referred to as "silica-rubbing". This method permits the selective sampling of external hydrocarbons from insect cuticle surfaces for subsequent analysis using gas chromatography-mass spectrometry (GC-MS). The cuticular hydrocarbons are first adsorbed to silica gel particles by rubbing the cuticle of insect specimens with the materials, and then are subsequently eluted using organic solvents. We compared the cuticular hydrocarbon profiles that resulted from extractions using silica-rubbing and solvent-soaking methods in four ant and one bee species: Linepithema humile, Azteca instabilis, Camponotus floridanus, Pogonomyrmex barbatus (Hymenoptera: Formicidae), and Euglossa dilemma (Hymenoptera: Apidae). We also compared the hydrocarbon profiles of Euglossa dilemma obtained via silica-rubbing and solid phase microextraction (SPME). Comparison of hydrocarbon profiles obtained by different extraction methods indicates that silica rubbing selectively extracts the hydrocarbons that are present on the surface of the cuticular wax layer, without extracting hydrocarbons from internal glands and tissues. Due to its surface specificity, efficiency, and low cost, this new method may be useful for studying the biology of insect cuticular hydrocarbons.

  9. Microbial protein in soil: influence of extraction method and C amendment on extraction and recovery.

    Science.gov (United States)

    Taylor, Erin B; Williams, Mark A

    2010-02-01

    The capacity to study the content and resolve the dynamics of the proteome of diverse microbial communities would help to revolutionize the way microbiologists study the function and activity of microorganisms in soil. To better understand the limitations of a proteomic approach to studying soil microbial communities, we characterized extractable soil microbial proteins using sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). Two methods were utilized to extract proteins from microorganisms residing in a Quitman and Benfield soil: (1) direct extraction of bulk protein from soil and (2) separation of the microorganisms from soil using density gradient centrifugation and subsequent extraction (DGC-EXT) of microbial protein. In addition, glucose and toluene amendments to soil were used to stimulate the growth of a subset of the microbial community. A bacterial culture and bovine serum albumin (BSA) were added to the soil to qualitatively assess their recovery following extraction. Direct extraction and resolution of microbial proteins using SDS-PAGE generally resulted in smeared and unresolved banding patterns on gels. DGC-EXT of microbial protein from soil followed by separation using SDS-PAGE, however, did resolve six to 10 bands in the Benfield but not the Quitman soil. DGC-EXT of microbial protein, but not direct extraction following the addition of glucose and toluene, markedly increased the number of bands (approximately 40) on the gels in both Benfield and Quitman soils. Low recoveries of added culture and BSA proteins using the direct extraction method suggest that proteins either bind to soil organic matter and mineral particles or that partial degradation takes place during extraction. Interestingly, DGC may have been preferentially selected for actively growing cells, as gauged by the 10-100x lower cy19:0/18:1omega7 ratio of the fatty acid methyl esters in the isolated community compared to that for the whole soil. DGC can be used to

  10. A Study on Antibacterial Activity and Chemical Composition of the Petroleum Ether Extract from Aspergillusniger Mycelia

    Institute of Scientific and Technical Information of China (English)

    Yang; XIAO; Wujuan; LIU; Zhu; LI

    2014-01-01

    In order to develop natural antibacterial agents,the antibacterial activity of Aspergillusnigerxj was investigated.After being cultured in potato dextrose liquid medium liquid medium,mycelia was under heating reflux extraction with 90% ethanol.Removal of ethanol under reduced pressure gave a residue,to which water was added and then extracted with petroleum ether and ethyl acetate.In vacuo evaporation of the solvents yielded three crude extracts.Then the disc diffusion method was used to measure the antibacterial activity of these extracts.The petroleum ether extract with antibacterial activity was separated by silica gel column chromatography method,then separated and identified by GC-MS after been methyl esterified.At the concentration of 50 mg /mL,the petroleum ether extract of mycelia exhibited inhibitory effect against Staphylococcus aureus.The petroleum ether extract from Aspergillusnigerxj mycelia contained natural substances with antibacterial activity and fatty acids are the main constituents in it.

  11. Effects of different methods of DNA extraction for activated sludge on the subsequent analysis of bacterial community profiles.

    Science.gov (United States)

    Sun, Lianpeng; Ouyang, Xiong; Tang, Yueheng; Yang, Ying; Luo, Ying

    2012-02-01

    The effect of different DNA extraction protocols on activated sludge DNA yield and bacterial community composition was evaluated by temperature gradient gel electrophoresis (TGGE). Nine different procedures to extract DNA were compared-sonication (30s), sonication (40s), sonication (50s), freezing-thawing, bead milling, sodium dodecyl sulfate (SDS)-lysozyme, SDS-proteinase K, SDS-lysozyme-proteinase, and a commercial extraction kit. It was found that the TGGE profiles and the DNA band numbers made significant differences via various extraction methods. The yield and purity of DNA extracted by sonication and other physical methods were not satisfactory, while the DNA purity extracted by SDS and other chemical-biological methods were better. Crude DNA extracts isolated by sonication and other physical methods passed the polymerase chain reaction, despite the absence of purification and acquired affluent DNA bands in TGGE. The affluence of bands in TGGE was not consistent with the yield and purification of DNA, but was correlative with extraction protocols. To analyze the activated sludge bacterial community by TGGE fingerprint, it is necessary to make a synthesis of the TGGE fingerprint profiles of chemical and physical DNA extraction methods to overcome the representative bias.

  12. A NOVEL METHOD FOR ARABIC MULTI-WORD TERM EXTRACTION

    Directory of Open Access Journals (Sweden)

    Hadni Meryem

    2014-10-01

    Full Text Available Arabic Multiword Terms (AMWTs are relevant strings of words in text documents. Once they are automatically extracted, they can be used to increase the performance of any Arabic Text Mining applications such as Categorization, Clustering, Information Retrieval System, Machine Translation, and Summarization, etc. Mainly the proposed methods for AMWTs extraction can be categorized in three approaches: Linguistic-based, Statistic-based, and hybrid-based approach. These methods present some drawbacks that limit their use. In fact they can only deal with bi-grams terms and their yield not good accuracies. In this paper, to overcome these drawbacks, we propose a new and efficient method for AMWTs Extraction based on a hybrid approach. This latter is composed by two main filtering steps: the Linguistic filter and the Statistical one. The Linguistic Filter uses our proposed Part Of Speech (POS Tagger and the Sequence identifier as patterns in order to extract candidate AMWTs. While the Statistical filter incorporate the contextual information, and a new proposed association measure based on Termhood and Unithood Estimation named NTC-Value. To evaluate and illustrate the efficiency of our proposed method for AMWTs extraction, a comparative study has been conducted based on Kalimat Corpus and using nine experiment schemes: In the linguistic filter, we used three POS Taggers such as Taani’s method based Rule-approach, HMM method based Statistical-approach, and our recently proposed Tagger based Hybrid –approach. While in the Statistical filter, we used three statistical measures such as C-Value, NC-Value, and our proposed NTC-Value. The obtained results demonstrate the efficiency of our proposed method for AMWTs extraction: it outperforms the other ones and can deal correctly with the tri-grams terms.

  13. Chemical mimicking of bio-assisted aluminium extraction by Aspergillus niger's exometabolites.

    Science.gov (United States)

    Boriová, Katarína; Urík, Martin; Bujdoš, Marek; Pifková, Ivana; Matúš, Peter

    2016-11-01

    Presence of microorganisms in soils strongly affects mobility of metals. This fact is often excluded when mobile metal fraction in soil is studied using extraction procedures. Thus, the first objective of this paper was to evaluate strain Aspergillus niger's exometabolites contribution on aluminium mobilization. Fungal exudates collected in various time intervals during cultivation were analyzed and used for two-step bio-assisted extraction of alumina and gibbsite. Oxalic, citric and gluconic acids were identified in collected culture media with concentrations up to 68.4, 2.0 and 16.5 mmol L(-1), respectively. These exometabolites proved to be the most efficient agents in mobile aluminium fraction extraction with aluminium extraction efficiency reaching almost 2.2%. However, fungal cultivation is time demanding process. Therefore, the second objective was to simplify acquisition of equally efficient extracting agent by chemically mimicking composition of main organic acid components of fungal exudates. This was successfully achieved with organic acids mixture prepared according to medium composition collected on the 12th day of Aspergillus niger cultivation. This mixture extracted similar amounts of aluminium from alumina compared to culture medium. The aluminium extraction efficiency from gibbsite by organic acids mixture was lesser than 0.09% which is most likely because of more rigid mineral structure of gibbsite compared to alumina. The prepared organic acid mixture was then successfully applied for aluminium extraction from soil samples and compared to standard single step extraction techniques. This showed there is at least 2.9 times higher content of mobile aluminium fraction in soils than it was previously considered, if contribution of microbial metabolites is considered in extraction procedures. Thus, our contribution highlights the significance of fungal metabolites in aluminium extraction from environmental samples, but it also simplifies the

  14. BMAA extraction of cyanobacteria samples: which method to choose?

    Science.gov (United States)

    Lage, Sandra; Burian, Alfred; Rasmussen, Ulla; Costa, Pedro Reis; Annadotter, Heléne; Godhe, Anna; Rydberg, Sara

    2016-01-01

    β-N-Methylamino-L-alanine (BMAA), a neurotoxin reportedly produced by cyanobacteria, diatoms and dinoflagellates, is proposed to be linked to the development of neurological diseases. BMAA has been found in aquatic and terrestrial ecosystems worldwide, both in its phytoplankton producers and in several invertebrate and vertebrate organisms that bioaccumulate it. LC-MS/MS is the most frequently used analytical technique in BMAA research due to its high selectivity, though consensus is lacking as to the best extraction method to apply. This study accordingly surveys the efficiency of three extraction methods regularly used in BMAA research to extract BMAA from cyanobacteria samples. The results obtained provide insights into possible reasons for the BMAA concentration discrepancies in previous publications. In addition and according to the method validation guidelines for analysing cyanotoxins, the TCA protein precipitation method, followed by AQC derivatization and LC-MS/MS analysis, is now validated for extracting protein-bound (after protein hydrolysis) and free BMAA from cyanobacteria matrix. BMAA biological variability was also tested through the extraction of diatom and cyanobacteria species, revealing a high variance in BMAA levels (0.0080-2.5797 μg g(-1) DW).

  15. Extracting oil from used auto tires at low temperature after chemical treatment.

    Science.gov (United States)

    Kandah, Munther; Al-Otoom, Awni; Al-Harahsheh, Mohammad; Al-Zoubi, Raed M; Al-Harahsheh, Adnan

    2017-03-01

    This study presents an alternative tactic to pyrolysis of auto tires avoiding the use of high temperature and increasing the yield of oil produced. It depends on a simple chemical treatment of auto tires with sodium carbonate at low temperature (50°C) followed by solvent extraction. This treatment produced two folds of the yield that can be obtained using normal solvent extraction. The experimental results suggests that sodium carbonate is responsible for breakage of CS bond in the main structure of auto tires making solvent extraction easier. Additionally, the sulphur content of the extracted oil using the sodium carbonate treatment is reduced significantly (by about 28%) making the product more favorable energy/fuel source. This technique allows about 30wt.% of oil to be extracted from the used auto tires at 50°C under atmospheric pressure resulted from the breakage of the sulphur cross-linking by the sodium carbonate.

  16. Valorization of By-Products from Commercial Fish Species: Extraction and Chemical Properties of Skin Gelatins.

    Science.gov (United States)

    Sousa, Sérgio C; Vázquez, José A; Pérez-Martín, Ricardo I; Carvalho, Ana P; Gomes, Ana M

    2017-09-14

    Fish skins constitute an important fraction of the enormous amount of wastes produced by the fish processing industry, part of which may be valorized through the extraction of gelatins. This research exploited the extraction and characterization of gelatins from the skin of three seawater fish species, namely yellowfin tuna (Thunnus albacares), blue shark (Prionace glauca), and greenland halibut (Reinhardtius hippoglossoides). Characterization included chemical composition, rheology, structure, texture, and molecular weight, whereas extraction studies intended to reduce costly steps during extraction process (reagents concentration, water consumption, and time of processing), while maintaining extraction efficiency. Chemical and physical characterization of the obtained gelatins revealed that the species from which the gelatin was extracted, as well as the heat treatment used, were key parameters in order to obtain a final product with specific properties. Therefore, the extraction conditions selected during gelatin production will drive its utilization into markets with well-defined specifications, where the necessity of unique products is being claimed. Such achievements are of utmost importance to the food industry, by paving the way to the introduction in the market of gelatins with distinct rheological and textural properties, which enables them to enlarge their range of applications.

  17. Microscale extraction method for HPLC carotenoid analysis in vegetable matrices

    Directory of Open Access Journals (Sweden)

    Sidney Pacheco

    2014-10-01

    Full Text Available In order to generate simple, efficient analytical methods that are also fast, clean, and economical, and are capable of producing reliable results for a large number of samples, a micro scale extraction method for analysis of carotenoids in vegetable matrices was developed. The efficiency of this adapted method was checked by comparing the results obtained from vegetable matrices, based on extraction equivalence, time required and reagents. Six matrices were used: tomato (Solanum lycopersicum L., carrot (Daucus carota L., sweet potato with orange pulp (Ipomoea batatas (L. Lam., pumpkin (Cucurbita moschata Duch., watermelon (Citrullus lanatus (Thunb. Matsum. & Nakai and sweet potato (Ipomoea batatas (L. Lam. flour. Quantification of the total carotenoids was made by spectrophotometry. Quantification and determination of carotenoid profiles were formulated by High Performance Liquid Chromatography with photodiode array detection. Microscale extraction was faster, cheaper and cleaner than the commonly used one, and advantageous for analytical laboratories.

  18. THE METHODS OF EXTRACTING WATER INFORMATION FROM SPOT IMAGE

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Some techniques and methods for deriving water information from SPOT -4 (XI) image were investigatedand discussed in this paper. An algorithm of decision-tree (DT) classification which includes several classifiers based onthe spectral responding characteristics of water bodies and other objects, was developed and put forward to delineate wa-ter bodies. Another algorithm of decision-tree classification based on both spectral characteristics and auxiliary informa-tion of DEM and slope (DTDS) was also designed for water bodies extraction. In addition, supervised classificationmethod of maximum-likelyhood classification (MLC), and unsupervised method of interactive self-organizing dada analy-sis technique (ISODATA) were used to extract waterbodies for comparison purpose. An index was designed and used toassess the accuracy of different methods adopted in the research. Results have shown that water extraction accuracy wasvariable with respect to the various techniques applied. It was low using ISODATA, very high using DT algorithm andmuch higher using both DTDS and MLC.

  19. METHOD TO EXTRACT BLEND SURFACE FEATURE IN REVERSE ENGINEERING

    Institute of Scientific and Technical Information of China (English)

    Lü Zhen; Ke Yinglin; Sun Qing; Kelvin W; Huang Xiaoping

    2003-01-01

    A new method of extraction of blend surface feature is presented. It contains two steps: segmentation and recovery of parametric representation of the blend. The segmentation separates the points in the blend region from the rest of the input point cloud with the processes of sampling point data, estimation of local surface curvature properties and comparison of maximum curvature values. The recovery of parametric representation generates a set of profile curves by marching throughout the blend and fitting cylinders. Compared with the existing approaches of blend surface feature extraction, the proposed method reduces the requirement of user interaction and is capable of extracting blend surface with either constant radius or variable radius. Application examples are presented to verify the proposed method.

  20. Extraction method for parasitic capacitances and inductances of HEMT models

    Science.gov (United States)

    Zhang, HengShuang; Ma, PeiJun; Lu, Yang; Zhao, BoChao; Zheng, JiaXin; Ma, XiaoHua; Hao, Yue

    2017-03-01

    A new method to extract parasitic capacitances and inductances for high electron-mobility transistors (HEMTs) is proposed in this paper. Compared with the conventional extraction method, the depletion layer is modeled as a physically significant capacitance model and the extrinsic values obtained are much closer to the actual results. In order to simulate the high frequency behaviour with higher precision, series parasitic inductances are introduced into the cold pinch-off model which is used to extract capacitances at low frequency and the reactive elements can be determined simultaneously over the measured frequency range. The values obtained by this method can be used to establish a 16-elements small-signal equivalent circuit model under different bias conditions. The results show good agreements between the simulated and measured scattering parameters up to 30 GHz.

  1. A Simple, Inexpensive and Safe Method for DNA Extraction of Frigid and Clotted Blood Samples

    Directory of Open Access Journals (Sweden)

    Nasrin Mohammadi

    2015-07-01

    Full Text Available Background: Extraction of blood genomicDNAis one of the main approaches for clinical and molecular biology studies. Although several methods have been developed for extraction of blood genomic DNA, most of these methods consume long time and use expensive chemicals such as proteinase K and toxic organic solvent such as phenol and chloroform. The objective of this study was to developed easy and safe method forDNAextraction from clotted and frozen whole blood. This method has many advantages: time reducing, using inexpensive materials, without phenol and chloroform, achieving of high molecular weight and good quality genomicDNA.Materials and Methods: DNA extraction was performed by two methods (new and phenol-chloroform method. Then quantity and quality parameters were evaluated by 1% agarose gel electrophoresis, Nano drop analysis and efficiency of Polymerase Chain Reaction (PCR.Results: Extracted DNA from 500μL of blood samples were 457.7ng/μl and 212ng/μL and their purity (OD260/OD280 were 1.8 and 1.81 for new recommended and phenol–chloroform methods respectively. The PCR results indicated that D16S539 and CSF1PO loci were amplified.Conclusion: These results shown that this method is simple, fast, safe and most economical.

  2. Spectrophotometric validation of assay method for selected medicinal plant extracts

    Directory of Open Access Journals (Sweden)

    Matthew Arhewoh

    2014-09-01

    Full Text Available Objective: To develop UV spectrophotometric assay validation methods for some selected medicinal plant extracts.Methods: Dried, powdered leaves of Annona muricata (AM and Andrographis paniculata (AP as well as seeds of Garcinia kola (GK and Hunteria umbellata (HU were separately subjected to maceration using distilled water. Different concentrations of the extracts were scanned spectrophotometrically to obtain wavelengths of maximum absorbance. The different extracts were then subjected to validation studies following international guidelines at the respective wavelengths obtained.Results: The results showed linearity at peak wavelengths of maximum absorbance of 292, 280, 274 and 230 nm for GK, HU, AM and AP, respectively. The calibration curves for the different concentrations of the extract gave R2 values ranging from 0.9831 for AM to 0.9996 for AP the inter-day and intra-day precision study showed that the relative standard deviation (% was ≤ 10% for all the extracts.Conclusion: The aqueous extracts and isolates of these plants can be assayed and monitored using these wavelengths.

  3. Influence of Extraction Methods on the Yield of Steviol Glycosides and Antioxidants in Stevia rebaudiana Extracts.

    Science.gov (United States)

    Periche, Angela; Castelló, Maria Luisa; Heredia, Ana; Escriche, Isabel

    2015-06-01

    This study evaluated the application of ultrasound techniques and microwave energy, compared to conventional extraction methods (high temperatures at atmospheric pressure), for the solid-liquid extraction of steviol glycosides (sweeteners) and antioxidants (total phenols, flavonoids and antioxidant capacity) from dehydrated Stevia leaves. Different temperatures (from 50 to 100 °C), times (from 1 to 40 min) and microwave powers (1.98 and 3.30 W/g extract) were used. There was a great difference in the resulting yields according to the treatments applied. Steviol glycosides and antioxidants were negatively correlated; therefore, there is no single treatment suitable for obtaining the highest yield in both groups of compounds simultaneously. The greatest yield of steviol glycosides was obtained with microwave energy (3.30 W/g extract, 2 min), whereas, the conventional method (90 °C, 1 min) was the most suitable for antioxidant extraction. Consequently, the best process depends on the subsequent use (sweetener or antioxidant) of the aqueous extract of Stevia leaves.

  4. A Novel Method of Genomic DNA Extraction for Cactaceae

    Directory of Open Access Journals (Sweden)

    Shannon D. Fehlberg

    2013-03-01

    Full Text Available Premise of the study: Genetic studies of Cactaceae can at times be impeded by difficult sampling logistics and/or high mucilage content in tissues. Simplifying sampling and DNA isolation through the use of cactus spines has not previously been investigated. Methods and Results: Several protocols for extracting DNA from spines were tested and modified to maximize yield, amplification, and sequencing. Sampling of and extraction from spines resulted in a simplified protocol overall and complete avoidance of mucilage as compared to typical tissue extractions. Sequences from one nuclear and three plastid regions were obtained across eight genera and 20 species of cacti using DNA extracted from spines. Conclusions: Genomic DNA useful for amplification and sequencing can be obtained from cactus spines. The protocols described here are valuable for any cactus species, but are particularly useful for investigators interested in sampling living collections, extensive field sampling, and/or conservation genetic studies.

  5. A novel method of genomic DNA extraction for Cactaceae1

    Science.gov (United States)

    Fehlberg, Shannon D.; Allen, Jessica M.; Church, Kathleen

    2013-01-01

    • Premise of the study: Genetic studies of Cactaceae can at times be impeded by difficult sampling logistics and/or high mucilage content in tissues. Simplifying sampling and DNA isolation through the use of cactus spines has not previously been investigated. • Methods and Results: Several protocols for extracting DNA from spines were tested and modified to maximize yield, amplification, and sequencing. Sampling of and extraction from spines resulted in a simplified protocol overall and complete avoidance of mucilage as compared to typical tissue extractions. Sequences from one nuclear and three plastid regions were obtained across eight genera and 20 species of cacti using DNA extracted from spines. • Conclusions: Genomic DNA useful for amplification and sequencing can be obtained from cactus spines. The protocols described here are valuable for any cactus species, but are particularly useful for investigators interested in sampling living collections, extensive field sampling, and/or conservation genetic studies. PMID:25202521

  6. Chemical ligation methods for the tagging of DNA-encoded chemical libraries.

    Science.gov (United States)

    Keefe, Anthony D; Clark, Matthew A; Hupp, Christopher D; Litovchick, Alexander; Zhang, Ying

    2015-06-01

    The generation of DNA-encoded chemical libraries requires the unimolecular association of multiple encoding oligonucleotides with encoded chemical entities during combinatorial synthesis processes. This has traditionally been achieved using enzymatic ligation. We discuss a range of chemical ligation methods that provide alternatives to enzymatic ligation. These chemical ligation methods include the generation of modified internucleotide linkages that support polymerase translocation and other modified linkages that while not supporting the translocation of polymerases can also be used to generate individual cDNA molecules containing encoded chemical information specifying individual library members. We also describe which of these approaches have been successfully utilized for the preparation of DNA-encoded chemical libraries and those that were subsequently used for the discovery of inhibitors.

  7. Optimization of the Phenol -Chloroform Silica DNA Extraction Method in Ancient Bones DNA Extraction

    Directory of Open Access Journals (Sweden)

    Morteza Sadeghi

    2014-04-01

    Full Text Available Introduction: DNA extraction from the ancient bones tissues is currently very difficult. Phenol chloroform silica method is one of the methods currently used for this aim. The purpose of this study was to optimize the assessment method. Methods: DNA of 62 bone tissues (average 3-11 years was first extracted with phenol chloroform silica methods and then with changing of some parameters of the methods the extracted DNA was amplified in eight polymorphisms area including FES, F13, D13S317, D16, D5S818, vWA and CD4. Results from samples gained by two methods were compared in acrylamide gel. Results: The average of PCR yield for new method and common method in eight polymorphism regions was 75%, 78%, 81%, 76%, 85%, 71%, 89%, 86% and 64%, 39%, 70%, 49%, 68%, 76%, 71% and 28% respectively. The average of DNA in optimized (in 35l silica density and common method were 267.5 µg/ml with 1.12 purity and 192.76 g/ml with 0.84 purity respectively. Conclusions: According to the findings of this study, it is estimated that longer EDTA attendance is an efficient agent in removing calcium and also adequate density of silica particles can be efficient in removal of PCR inhibitors.

  8. A benchmarking method to measure dietary absorption efficiency of chemicals by fish.

    Science.gov (United States)

    Xiao, Ruiyang; Adolfsson-Erici, Margaretha; Åkerman, Gun; McLachlan, Michael S; MacLeod, Matthew

    2013-12-01

    Understanding the dietary absorption efficiency of chemicals in the gastrointestinal tract of fish is important from both a scientific and a regulatory point of view. However, reported fish absorption efficiencies for well-studied chemicals are highly variable. In the present study, the authors developed and exploited an internal chemical benchmarking method that has the potential to reduce uncertainty and variability and, thus, to improve the precision of measurements of fish absorption efficiency. The authors applied the benchmarking method to measure the gross absorption efficiency for 15 chemicals with a wide range of physicochemical properties and structures. They selected 2,2',5,6'-tetrachlorobiphenyl (PCB53) and decabromodiphenyl ethane as absorbable and nonabsorbable benchmarks, respectively. Quantities of chemicals determined in fish were benchmarked to the fraction of PCB53 recovered in fish, and quantities of chemicals determined in feces were benchmarked to the fraction of decabromodiphenyl ethane recovered in feces. The performance of the benchmarking procedure was evaluated based on the recovery of the test chemicals and precision of absorption efficiency from repeated tests. Benchmarking did not improve the precision of the measurements; after benchmarking, however, the median recovery for 15 chemicals was 106%, and variability of recoveries was reduced compared with before benchmarking, suggesting that benchmarking could account for incomplete extraction of chemical in fish and incomplete collection of feces from different tests. © 2013 SETAC.

  9. Fate of metals before and after chemical extraction of incinerated sewage sludge ash.

    Science.gov (United States)

    Li, Jiang-Shan; Tsang, Daniel C W; Wang, Qi-Ming; Fang, Le; Xue, Qiang; Poon, Chi Sun

    2017-08-05

    Chemical extraction of incinerated sewage sludge ash (ISSA) can effectively recycle P, but it may change the speciation and mobility of the remaining metals. This study investigated the changes of the leaching potential and distribution of metals in the chemically extracted ISSA. Batch extraction experiments with different extractants, including inorganic acids, organic acids, and chelating agents, were conducted on the ISSA collected from a local sewage sludge incinerator. The extraction of Zn, Cu, Pb, Ni, Cd, Ba, Cr and As from the ISSA and the corresponding changes of the mobility and speciation were examined. The results showed that the metals in ISSA were naturally stable because large portions of metals were associated with the residual fraction. The inorganic (HNO3 and H2SO4) and organic acids (citric acid and oxalic acid) significantly co-dissolved the metals through acid dissolution, but the reduction in the total concentrations did not tally the leaching potential of the residual metals. The increase in the exchangeable fraction due to destabilization by the extractants significantly enhanced the mobility and leachability of the metals in the residual ISSA. Chelating agents (EDTA and EDTMP) only extracted a small quantity of metals and had a marginal effect on the fate of the residual metals, but they significantly reduced the Fe/Mn oxide-bound fraction. In comparison, the bioaccessibility of residual metals were reduced to varying extent. Therefore, the disposal or reuse of chemically extracted ISSA should be carefully evaluated in view of possible increase in mobility of residual metals in the environment. Copyright © 2017. Published by Elsevier Ltd.

  10. An Improved Method for High Quality Metagenomics DNA Extraction from Human and Environmental Samples

    DEFF Research Database (Denmark)

    Bag, Satyabrata; Saha, Bipasa; Mehta, Ojasvi

    2016-01-01

    and human origin samples. We introduced a combination of physical, chemical and mechanical lysis methods for proper lysis of microbial inhabitants. The community microbial DNA was precipitated by using salt and organic solvent. Both the quality and quantity of isolated DNA was compared with the existing...... methodologies and the supremacy of our method was confirmed. Maximum recovery of genomic DNA in the absence of substantial amount of impurities made the method convenient for nucleic acid extraction. The nucleic acids obtained using this method are suitable for different downstream applications. This improved...

  11. Method and Device for Extraction of Liquids from a Solid Particle Material

    Science.gov (United States)

    deMayo, Benjamin (Inventor)

    2017-01-01

    A method, system, and device for separating oil from oil sands or oil shale is disclosed. The method includes heating the oil sands, spinning the heated oil sands, confining the sand particles mechanically, and recovering the oil substantially free of the sand. The method can be used without the addition of chemical extraction agents. The system includes a source of centrifugal force, a heat source, a separation device, and a recovery device. The separation device includes a method of confining the sands while allowing the oil to escape, such as through an aperture.

  12. Investigation of Chemical Equilibrium Kinetics by the Electromigration Method

    CERN Document Server

    Bozhikov, G A; Bontchev, G D; Maslov, O D; Milanov, M V; Dmitriev, S N

    2002-01-01

    Measurement of the chemical reaction rates for complex formation as well as hydrolysis type reactions by the method of horizontal zone electrophoresis is outlined. The correlation between chemical equilibrium kinetics and electrodiffusion processes in a constant d.c. electric field is described. In model electromigration experiments the reaction rate constant of the complex formation of Hf(IV) and DTPA is determined.

  13. Environmental friendly method for the extraction of coir fibre and isolation of nanofibre

    CSIR Research Space (South Africa)

    Abraham, E

    2013-02-01

    Full Text Available -1 Carbohydrate Polymers February 2013/ Vol.9 No 2 Environmental friendly method for the extraction of coir fibre and isolation of nanofibre Eldho Abraham a,b,d, B. Deepab, L.A. Pothenb,?, J. Cintilc, S. Thomasc, M.J. Johnd, R. Anandjiwala d , S....S. Narine a a Trent Biomaterials Research Program, Trent University, Peterborough, Ontario, Canada b Department of Chemistry, Bishop Moore College, Mavelikkara, Kerala, India c School of Chemical Sciences, Mahatma Gandhi University, Kottayam 686...

  14. Correction method for line extraction in vision measurement.

    Directory of Open Access Journals (Sweden)

    Mingwei Shao

    Full Text Available Over-exposure and perspective distortion are two of the main factors underlying inaccurate feature extraction. First, based on Steger's method, we propose a method for correcting curvilinear structures (lines extracted from over-exposed images. A new line model based on the Gaussian line profile is developed, and its description in the scale space is provided. The line position is analytically determined by the zero crossing of its first-order derivative, and the bias due to convolution with the normal Gaussian kernel function is eliminated on the basis of the related description. The model considers over-exposure features and is capable of detecting the line position in an over-exposed image. Simulations and experiments show that the proposed method is not significantly affected by the exposure level and is suitable for correcting lines extracted from an over-exposed image. In our experiments, the corrected result is found to be more precise than the uncorrected result by around 45.5%. Second, we analyze perspective distortion, which is inevitable during line extraction owing to the projective camera model. The perspective distortion can be rectified on the basis of the bias introduced as a function of related parameters. The properties of the proposed model and its application to vision measurement are discussed. In practice, the proposed model can be adopted to correct line extraction according to specific requirements by employing suitable parameters.

  15. Chemical analysis of fish bile extracts for monitoring endocrine disrupting chemical exposure in water: Bisphenol A, alkylphenols, and norethindrone.

    Science.gov (United States)

    Wu, Minghong; Pan, Chenyuan; Yang, Ming; Xu, Bentuo; Lei, Xiangjie; Ma, Jing; Cai, Ling; Chen, Jingsi

    2016-01-01

    The present study determined concentrations of estrogenic bisphenol A (BPA), nonylphenol, octylphenol (4-tert-octylphenol), butylphenol (4-tert-butylphenol), and progestogenic norethindrone by liquid chromatography-tandem mass spectrometry in bile extracts from field fish from the Xin'an River and market fish in Shanghai, China. Compared with the field fish, endocrine disrupting chemical (EDC) concentrations in market fish bile were at relatively high levels with high detectable rates. The average concentrations of BPA, nonylphenol, 4-tert-octylphenol, 4-tert-butylphenol, and norethindrone in field fish bile were 30.1 µg/L, 203 µg/L, 4.69 µg/L, 7.84 µg/L, and 0.514 µg/L, respectively; in market fish bile they were 240 µg/L, 528 µg/L, 76.5 µg/L, 12.8 µg/L, and 5.26 µg/L, respectively; and in the surface water of Xin'an River they were 38.8 ng/L, 7.91 ng/L, 1.98 ng/L, 2.66 ng/L, and 0.116 ng/L, respectively. The average of total estrogenic activity of river water was 3.32 ng/L estradiol equivalents. High bioconcentration factors (BCFs) were discovered for all 5 EDCs (≧998-fold) in field fish bile. Furthermore, the authors analyzed the BCF value of BPA in fish bile after 30-d exposure to environmentally relevant concentrations of BPA in the laboratory, and the analysis revealed that BCF in fish bile (BCF(Fish bile)) changed in an inverse concentration-dependent manner based on the log10-transformed BPA concentration in water. Strikingly, the data from the field study were well fitted within this trend. The data together suggested that analysis of fish bile extracts could be an efficient method for assessing waterborne EDCs exposure for aquatic biota.

  16. Chemical analysis and quality control of Ginkgo biloba leaves, extracts, and phytopharmaceuticals

    NARCIS (Netherlands)

    Beek, van T.A.; Montoro, P.

    2009-01-01

    The chemical analysis and quality control of Ginkgo leaves, extracts, phytopharmaceuticals and some herbal supplements is comprehensively reviewed. The review is an update of a similar, earlier review in this journal [T.A. van Beek, J. Chromatogr. A 967 (2002) 21¿55]. Since 2001 over 3000 papers on

  17. Chemical composition and antibacterial activity of a hexane extract of Tunisian caprifig latex from the unripe fruit of Ficus carica.

    Science.gov (United States)

    Lazreg-Aref, Houda; Mars, Massoud; Fekih, Abdelwaheb; Aouni, Mahjoub; Said, Khaled

    2012-04-01

    The plant kingdom has become a target in the search for new drugs and biologically active lead compounds. The common Jrani Tunisian caprifig Ficus carica L. (Moraceae) is one of the large number of plant species that are used in folklore medicine yet to be investigated for the treatment of many diseases, including those of infectious nature. Hexane extract of the Tunisian common Jrani caprifig latex was assayed for antibacterial activity against several Gram-positive and Gram-negative bacteria. Chemical composition of the extract was also investigated. The hexane extract was obtained from Tunisian Jrani caprifig latex by maceration, and then analyzed by gas chromatography-mass spectrometry. The extract was tested in vitro for antibacterial activity by the disc diffusion method and minimal inhibitory concentration (MIC) was also determined for all the test cultures. Thirty-six compounds of the extract were identified, 90.56% of the total area of peaks were coumarins. A strong bactericidal effect was demonstrated. The most sensitive bacteria were Staphylococcus saprophyticus clinical isolate, and Staphylococcus aureus ATCC 25923, with a MIC of 19 µg/mL. These findings demonstrate an effective in vitro antibacterial activity of the hexane extract of caprifig latex.

  18. Comparison of the Chemical Composition and Pharmacological Effects of the Aqueous and Ethanolic Extracts from a Tibetan “Snow Lotus” (Saussurea laniceps Herb

    Directory of Open Access Journals (Sweden)

    Zhijun Yang

    2012-06-01

    Full Text Available To understand the impacts of different processing methods on the composition and effects of the herb Saussurea laniceps (SL, the present study report the first comparison of the chemical constituents of aqueous and ethanolic SL extracts using chromatographic analysis, and to compare their pharmacological effects in a mouse anti-inflammatory, anti-nociceptive model and an in vitro anti-oxidant test. Chemical comparison demonstrated that the types of chemicals in the two extracts were identical, but the contents of the main constituents in the aqueous extract were lower than those of the ethanolic extract. A transesterification of dicaffeoylquinic acids took place in the aqueous extract during boiling. As for pharmacological effects, oral administration of aqueous and ethanolic SL extracts significantly inhibited croton oil-induced mice ear edema, and significantly inhibited acetic acid-induced mice writhings, respectively. In the DPPH anti-oxidant activity test, the IC50 values were calculated as 409.6 mg/L and 523.4 mg/L for the ethanolic and aqueous extracts, respectively. The inhibitory effects of the ethanolic extract were more potent than those of the aqueous extract in all pharmacological tests, although there was no significant difference. This study suggests that the two preparations should be distinguished when used.

  19. Comparison of RNA extraction methods in Thai aromatic coconut water

    Directory of Open Access Journals (Sweden)

    Nopporn Jaroonchon

    2015-10-01

    Full Text Available Many researches have reported that nucleic acid in coconut water is in free form and at very low yields which makes it difficult to process in molecular studies. Our research attempted to compare two extraction methods to obtain a higher yield of total RNA in aromatic coconut water and monitor its change at various fruit stages. The first method used ethanol and sodium acetate as reagents; the second method used lithium chloride. We found that extraction using only lithium chloride gave a higher total RNA yield than the method using ethanol to precipitate nucleic acid. In addition, the total RNA from both methods could be used in amplification of betaine aldehyde dehydrogenase2 (Badh2 genes, which is involved in coconut aroma biosynthesis, and could be used to perform further study as we expected. From the molecular study, the nucleic acid found in coconut water increased with fruit age.

  20. Seamless Ligation Cloning Extract (SLiCE) cloning method.

    Science.gov (United States)

    Zhang, Yongwei; Werling, Uwe; Edelmann, Winfried

    2014-01-01

    SLiCE (Seamless Ligation Cloning Extract) is a novel cloning method that utilizes easy to generate bacterial cell extracts to assemble multiple DNA fragments into recombinant DNA molecules in a single in vitro recombination reaction. SLiCE overcomes the sequence limitations of traditional cloning methods, facilitates seamless cloning by recombining short end homologies (15-52 bp) with or without flanking heterologous sequences and provides an effective strategy for directional subcloning of DNA fragments from bacterial artificial chromosomes or other sources. SLiCE is highly cost-effective and demonstrates the versatility as a number of standard laboratory bacterial strains can serve as sources for SLiCE extract. We established a DH10B-derived E. coli strain expressing an optimized λ prophage Red recombination system, termed PPY, which facilitates SLiCE with very high efficiencies.

  1. A simple and rapid infrared-assisted self enzymolysis extraction method for total flavonoid aglycones extraction from Scutellariae Radix and mechanism exploration.

    Science.gov (United States)

    Wang, Liping; Duan, Haotian; Jiang, Jiebing; Long, Jiakun; Yu, Yingjia; Chen, Guiliang; Duan, Gengli

    2017-07-20

    A new, simple, and fast infrared-assisted self enzymolysis extraction (IRASEE) approach for the extraction of total flavonoid aglycones (TFA) mainly including baicalein, wogonin, and oroxylin A from Scutellariae Radix is presented to enhance extraction yield. Extraction enzymolysis temperature, enzymolysis liquid-to-solid ratio, enzymolysis pH, enzymolysis time and infrared power, the factors affecting IRASEE procedure, were investigated in a newly designed, temperature-controlled infrared-assisted extraction (TC-IRAE) system to acquire the optimum analysis conditions. The results illustrated that IRASEE possessed great advantages in terms of efficiency and time compared with other conventional extraction techniques. Furthermore, the mechanism of IRASEE was preliminarily explored by observing the microscopic change of the samples surface structures, studying the main chemical compositions change of the samples before and after extraction and investigating the kinetics and thermodynamics at three temperature levels during the IRASEE process. These findings revealed that IRASEE can destroy the surface microstructures to accelerate the mass transfer and reduce the activation energy to intensify the chemical process. This integrative study presents a simple, rapid, efficient, and environmental IRASEE method for TFA extraction which has promising prospects for other similar herbal medicines. Graphical Abstract ᅟ.

  2. Biomechanical properties of acellular sciatic nerves treated with a modified chemical method

    Institute of Scientific and Technical Information of China (English)

    Xinlong Ma; Zhao Yang; Xiaolei Sun; Jianxiong Ma; Xiulan Li; Zhenzhen Yuan; Yang Zhang; Honggang Guo

    2011-01-01

    Nerve grafts are able to adapt to surrounding biomechanical environments if the nerve graft itself exhibits appropriate biomechanical properties (load, elastic modulus, etc.). The present study was designed to determine the differences in biomechanical properties between fresh and chemically acellularized sciatic nerve grafts. Two different chemical methods were used to establish acellular nerve grafts. The nerve was chemically extracted in the Sondell method with a combination of Triton X-100 (nonionic detergent) and sodium deoxycholate (anionic detergent), and in the modified method with a combination of Triton X-200 (anionic detergent), sulfobetaine-10 (SB-10, amphoteric detergents), and sulfobetaine-16 (SB-16, amphoteric detergents). Following acellularization, hematoxylin-eosin staining and scanning electron microscopy demonstrated that the effect of acellularization via the modified method was similar to the traditional Sondell method. However, effects of demyelination and nerve fiber tube integrity were superior to the traditional Sondell method. Biomechanical testing showed that peripheral nerve graft treated using the chemical method resulted in decreased biomechanical properties (ultimate load, ultimate stress, ultimate strain, and mechanical work to fracture) compared with fresh nerves, but the differences had no statistical significance (P > 0.05). These results demonstrated no significant effect on biomechanical properties of nerves treated using the chemical method. In conclusion, nerve grafts treated via the modified method removed Schwann cells, preserved neural structures, and ensured biomechanical properties of the nerve graft, which could be more appropriate for implantation studies.

  3. Chemical constituents and pharmacological profile of Gunnera manicata L. extracts

    Directory of Open Access Journals (Sweden)

    Kristiane de Cássia Mariotti

    2014-03-01

    Full Text Available Gunnera perpensa L. (Gunneraceae is a native South African plant widely used in traditional medicine as an antibacterial and antifungal. In southern Brazil there is the native species called Gunnera manicata L. that also belongs to the Gunneraceae. Nevertheless, there is no information about chemical and pharmacological properties of South American Gunnera species. Therefore this study aimed at assessing the phytochemical and pharmacological profiles of aqueous and methanol Brazilian G. manicata extracts. The results showed that antimicrobial activity in an agar diffusion assay was effective against Staphylococcus aureus and Candida albicans . Phenolic compounds were investigated by liquid chromatography coupled with a tandem mass spectrometer (LC-MS/MS and all extracts presented gallic acid and only the methanol extract obtained from the leaves exhibited hyperoside. Rutin, quercetin and chlorogenic acid were not found in the samples analysed. Total phenolic content was higher in methanol extract and total flavonoid content was low in all extracts. Antioxidant activity was evaluated by the 2,2-diphenyl-1-picryl-hydrazyl (DPPH radical test, and all samples presented good to moderate antioxidant activity. These results encourage complementary studies on the chemical composition of the plant extracts focusing on isolation and structure elucidation of their active compounds.

  4. Chemical profiling of Centella asiatica under different extraction solvents and its antibacterial activity, antioxidant activity

    Directory of Open Access Journals (Sweden)

    Supawan Rattanakom

    2015-12-01

    Full Text Available Centella asiatica (L urban, synonym Hydrocotyle asiatica, is found almost all over the world. This plant is famous in Ayurvedic medicine and used in the management of central nervous system, skin and gastrointestinal disorder. Thus this research had been done to evaluate the effect of solvent extraction (Ethanol, Chloroform and Hexane of C. asiatica on chemical profile, antioxidant activity and antibacterial activity against some foodborne pathogens. The result showed that all solvents (ethanol, chloroform and hexane used in extraction showed antibacterial activity against Salmonella enterica Typhimurium U302, S. enterica Enteritidis, S. enterica 4,5,12:I human (US clone, Bacillus cereus and B. subtilis at 50mg/ml concentration. In antioxidant part, ethanolic extract gave highest phenolic content and FRAP value. The results also showed that different extraction solvent gave different chemical profile. Hexane extract C. asiatica showed lowest in both antibacterial and antioxidant activity. Ethanolic and chloroform extract of C. asiatica showed promising potential in both antibacterial and antioxidant activity.

  5. Extraction of alumina and sodium oxide from red mud by a mild hydro-chemical process.

    Science.gov (United States)

    Zhong, Li; Zhang, Yifei; Zhang, Yi

    2009-12-30

    A mild hydro-chemical process to extract Al(2)O(3) in red mud to produce sodium aluminate hydrate was investigated, and the optimum conditions of Al(2)O(3) extraction were verified by experiments as leaching in 45% NaOH solution with CaO-to-red mud mass ratio of 0.25 and liquid-to-solid ratio of 0.9, under 0.8 MPa at 200 degrees C for 3.5h. Subsequent process of extracting Na(2)O from the residue of Al(2)O(3) extraction was carried out in 7% NaOH solution with liquid-to-solid ratio of 3.8 under 0.9 MPa at 170 degrees C for 2h. Overall, 87.8% of Al(2)O(3) and 96.4% of Na(2)O were extracted from red mud. The final residues with less than 1% Na(2)O could be utilized as feedstock in construction materials. The chemical reactions taking place in both Al(2)O(3) and Na(2)O extractions from red mud are proposed.

  6. Calculation of radon concentration in water by toluene extraction method

    Energy Technology Data Exchange (ETDEWEB)

    Saito, Masaaki [Tokyo Metropolitan Isotope Research Center (Japan)

    1997-02-01

    Noguchi method and Horiuchi method have been used as the calculation method of radon concentration in water. Both methods have two problems in the original, that is, the concentration calculated is changed by the extraction temperature depend on the incorrect solubility data and the concentration calculated are smaller than the correct values, because the radon calculation equation does not true to the gas-liquid equilibrium theory. However, the two problems are solved by improving the radon equation. I presented the Noguchi-Saito equation and the constant B of Horiuchi-Saito equation. The calculating results by the improved method showed about 10% of error. (S.Y.)

  7. Chemical characterization and cytoprotective effect of the hydroethanol extract from Annona coriacea Mart. (Araticum

    Directory of Open Access Journals (Sweden)

    Jose G.A.S Junior

    2016-01-01

    Full Text Available Introduction: Annona coriacea Mart. (araticum is a widely distributed tree in the cerrado. Its value is attributed principally to the consumption of its fruit which possesses a large nutritive potential. The objective was to identify the chemical profile and evaluate the antimicrobial and cytoprotective activity of the hydroethanol extract of A. coriacea Mart. (HEAC leaves against the toxicity of mercury chloride. Materials and Methods: The characterization of components was carried out using high-performance liquid chromatography (HPLC. The minimum inhibitory concentration (MIC was determined by microdilution method in broth with strains of Staphylococcus aureus, Escherichia coli, and Pseudomonas aeruginosa. For evaluation of the modulatory and cytoprotective activity of aminoglycoside antibiotics (gentamicin and amikacin and mercury chloride (HgCl2, the substances were associated with the HEAC at subinhibitory concentrations (MIC/8. Results and Discussion: The HPLC analysis revealed the presence of flavonoids such as Luteolin (1.84% and Quercetin (1.19% in elevated concentrations. The HEAC presented an MIC ≥512 μg/mL and significant antagonistic action in aminoglycosides modulation, and it also showed cytoprotective activity to S. aureus (significance P< 0.0001 and E. coli(significance P< 0.05 bacteria against the mercury chloride heavy metal with significance, this action being attributed to the chelating properties of the flavonoids found in the chemical identification. Conclusions: The results acquired in this study show that the HEAC presents cytoprotective activity over the tested strains in vitro and can also present antagonistic effect when associated with aminoglycosides, reinforcing the necessity of taking caution when combining natural and pharmaceutical products.

  8. Seasonal variations of antimicrobial activity and chemical composition of essential oils extracted from three Citrus limon L. Burm. cultivars.

    Science.gov (United States)

    Settanni, L; Randazzo, W; Palazzolo, E; Moschetti, M; Aleo, A; Guarrasi, V; Mammina, C; San Biagio, P L; Marra, F P; Moschetti, G; Germanà, M A

    2014-01-01

    In order to investigate the seasonal variations of antimicrobial properties and chemical composition of essential oils (EOs), three different cultivars of Citrus limon L. Burm. spp. (Femminello Santa Teresa, Monachello and Femminello Continella) were collected at 6-week intervals, from December 2012 to April 2013, for a total of four harvests. The EOs were extracted from lemon peel by hydro-distillation. The antimicrobial activity, tested by paper disc diffusion method, was evaluated against common food-related pathogenic bacteria (Listeria monocytogenes, Staphylococcus aureus, Salmonella enterica and Enterobacter spp.). EOs were more effective against Gram-positive than Gram-negative bacteria at each collection time, but a strong strain dependence was evidenced. Monachello EOs showed the highest inhibition power. The chemical characterisation of the EOs performed by gas chromatography/mass spectrometry identified from 36 to 42 molecules. The chemical difference registered among samples and seasons may explain the different antimicrobial efficacies recorded.

  9. Methods for Extraction and Charaterization of Tannins from Some Acacia Species of Sudan

    Directory of Open Access Journals (Sweden)

    Isam Eldin Hussein Elgailani

    2016-06-01

    Full Text Available The study is aimed to analyze and compare extraction methods of tannins from three common Acacia species of Sudan. The Acacia species selected were Acacia nilotica, Acacia seyal and Acacia senegal. Bark samples from bulk collections of the three Acacia species were extracted with water, 80% methanol and 70% acetone. Two sets of extraction were made, one by boiling and a second by shaking the samples in the respective solvents for eight hours at room temperature. Although the amount of material extracted by these two procedures did not differ greatly (P > 0.05, 70% acetone was a more efficient solvent than either water or 80% methanol. The tannins of mature fruits extract of Acacia nilotica were identified by using Thin Layer Chromatography (TLC, Ultraviolet and Infrared spectroscopy. Comparisons of absorption spectra and TLC of the reference tannins and some phenolics with that of Acacia nilotica extracts revealed the presence of both condensed and hydrolyzable tannins, since it consists of catechin, tannic and gallic acids. Catechin considered to be the phenolic precursor of condensed tannins. Hydrolysis of Acacia nilotica extract, tannic and gallic acids by butanolic-hydrochloric acid yielded gallic acid which is considered to be a chemical precursor of hydrolyzable tannins

  10. Chemical composition and antibacterial activity of methanolic extract and essential oil of Iranian Teucrium polium against some of phytobacteria.

    Science.gov (United States)

    Purnavab, S; Ketabchi, S; Rowshan, V

    2015-01-01

    The antibacterial activity of essential oil and methanolic extract of Teucrium polium was determined against Pseudomonas aeruginosa, Pantoea agglomerans, Brenneria nigrifluens, Rhizobium radiobacter, Rhizobium vitis, Streptomyces scabies, Ralstonia solanacearum, Xanthomonas campestris and Pectobacterium cartovorum by disc diffusion method. Minimum inhibitory concentration and minimum bactericidal concentration were determined by using the serial dilution method. Chemical composition of essential oil and methanolic extract was determined by GC-MS and HPLC. α-Pinene (25.769%) and myrcene (12.507) were of the highest percentage in T. polium essential oil, and sinapic acid (15.553 mg/g) and eugenol (6.805 mg/g) were the major compounds in the methanolic extract. Our results indicate that both methanolic extract and essential oil did not show antibacterial activity against P. aeruginosa. Also the essential oil did not show antibacterial activity against P. cartovorum. In general, both methanolic extract and essential oil showed the same antibacterial activity against R. solanacearum, P. agglomerans, B. nigrifluens and S. scabies.

  11. Identification of Chemical Constituents in the Extract and Rat Serum from Ziziphus Jujuba Mill by HPLC-PDA-ESI-MSn.

    Science.gov (United States)

    Wang, Shuping; Zhang, Jingze; Zhang, Zhidan; Gao, Wenyuan; Yan, Yanan; Li, Xia; Liu, Changxiao

    2014-01-01

    Chinese jujube (Ziziphus jujuba Mill.) has long been widely used for human consumption and medicinal purposes in China. It has been reported to possess several vital biological activities. However, the systematic study on the chemical constituents absorbed into plasma and their metabolites is still insufficient.A high-performance liquid chromatography-photodiode array detector-electrospray ionization ion-mass spectrometry (HPLC-PDA-ESI-MS(n)) method was established to analyze the ethanol extract in Ziziphus jujuba Mill and the constituents absorbed into rat serum. In the present study, a dose of 10 mL/Kg of ethanol extract of jujube, which is equivalent to 12.5 g crude dried herb/Kg, was orally administrated to rats. The main components were analyzed in the ethanol extract of Ziziphus jujuba Mill and the parent constituents and metabolites were studied in rat plasma samples after oral administration of the ethanol extract of jujube.D101 macroporous polystyrene resin was a good pretreatment method to obtain better separation and impurity removal effect. Twenty-two compounds were identified in the ethanol extract of Ziziphus jujuba Mill. Four parent compounds and four metabolites were detected in rat serum. Among them, seventeen compounds were reported for the first time.

  12. Carbon Dioxide Extraction from the Atmosphere Through Engineered Chemical Sinkage: Enabling Energy and Environmental Security

    Science.gov (United States)

    Dubey, M. K.; Ziock, H.; Rueff, G.; Smith, W. S.; Colman, J.; Elliott, S.; Lackner, K.; Johnston, N. A.

    2002-05-01

    We present the case for carbon dioxide (CO2) extraction from air using engineered chemical sinks as a means of sustaining fossil energy use by avoiding climate change. Existing carbon sequestration strategies such as CO2 injection into geologic formations or the deep ocean and mineral carbonation, require a pure stream of concentrated CO2 to be viable. Furthermore, current emphasis on reducing the global CO2 emissions is on large centralized power plants. However, more than half of all emissions are from the transportation sector and small, distributed sources such as home heating, etc. Most solutions for dealing with these sources explicitly or implicitly entail completely overhauling the existing infrastructure. To solve these problems, Los Alamos National Laboratory has conceived a novel approach for directly extracting CO2 from the atmosphere. Direct extraction converts the dilute CO2 (370 parts per million) in the atmosphere into a pure CO2 stream ready for permanent sequestration. It provides the following advantages: (1) Preserves our existing energy use and fuel distribution systems, which represent a large investment, (2) Indirectly captures CO2 from the myriad of small, distributed, and mobile sources that otherwise are not accessible to sequestration, (3) Allows atmospheric CO2 levels to be restored to their pre-industrial age value, (4) Provides free transport of CO2 to suitable sequestration sites by using natural atmospheric circulation, and (5) Is relatively compact and therefore inexpensive when compared to renewable concepts. Our concept harnesses atmospheric circulation to transport CO2 to sites where the CO2 is extracted by binding it to an adsorbent. The bound CO2 is then recovered as pure gas by heating together with the solid adsorbent that is recycled. As a proof of concept, we show that an aqueous Ca(OH)2 solution efficiently converts CO2 to a CaCO3 solid that can be heated to obtain pure CO2 and recover the CaO. Even with recycling costs

  13. Single corn kernel aflatoxin B1 extraction and analysis method

    Science.gov (United States)

    Aflatoxins are highly carcinogenic compounds produced by the fungus Aspergillus flavus. Aspergillus flavus is a phytopathogenic fungus that commonly infects crops such as cotton, peanuts, and maize. The goal was to design an effective sample preparation method and analysis for the extraction of afla...

  14. Solid phase extraction method for determination of mitragynine in ...

    African Journals Online (AJOL)

    mitragynine in urine and its application to mitragynine excretion ... Purpose: To develop a solid phase extraction (SPE) method that utilizes reverse-phase high performance .... solution of MG (1 mg/mL) which was further ... Facility, Prince of Songkla University and carried ..... d), which permit unrestricted use, distribution,.

  15. Extraction Methods of Spanish Broom (Spartium Junceum L.

    Directory of Open Access Journals (Sweden)

    Drago Katović

    2011-12-01

    Full Text Available Effects of different extraction methods of the Spanish Broom shoots were measured and compared with the purpose of obtaining composite material. The content of cellulose, lignin, pentosan and ash in the Spanish Broom fibers was determined. SEM analyses were performed.

  16. Odour Detection Methods: Olfactometry and Chemical Sensors

    Directory of Open Access Journals (Sweden)

    Sara Lovascio

    2011-05-01

    Full Text Available The complexity of the odours issue arises from the sensory nature of smell. From the evolutionary point of view olfaction is one of the oldest senses, allowing for seeking food, recognizing danger or communication: human olfaction is a protective sense as it allows the detection of potential illnesses or infections by taking into account the odour pleasantness/unpleasantness. Odours are mixtures of light and small molecules that, coming in contact with various human sensory systems, also at very low concentrations in the inhaled air, are able to stimulate an anatomical response: the experienced perception is the odour. Odour assessment is a key point in some industrial production processes (i.e., food, beverages, etc. and it is acquiring steady importance in unusual technological fields (i.e., indoor air quality; this issue mainly concerns the environmental impact of various industrial activities (i.e., tanneries, refineries, slaughterhouses, distilleries, civil and industrial wastewater treatment plants, landfills and composting plants as sources of olfactory nuisances, the top air pollution complaint. Although the human olfactory system is still regarded as the most important and effective “analytical instrument” for odour evaluation, the demand for more objective analytical methods, along with the discovery of materials with chemo-electronic properties, has boosted the development of sensor-based machine olfaction potentially imitating the biological system. This review examines the state of the art of both human and instrumental sensing currently used for the detection of odours. The olfactometric techniques employing a panel of trained experts are discussed and the strong and weak points of odour assessment through human detection are highlighted. The main features and the working principles of modern electronic noses (E-Noses are then described, focusing on their better performances for environmental analysis. Odour emission monitoring

  17. Application of ultrasonic extraction method in the preparation of the directive action beverage from black currant

    Directory of Open Access Journals (Sweden)

    N. S. Rodionova

    2016-01-01

    Full Text Available The article presents the results of experimental determination of physical-and chemical parameters, the amount of anthocyanins, the definition of color and organoleptic characteristics of the beverage prepared with ultrasonic extraction method in comparison with the fruit-drink, obtained according to traditional recipe. Black currant was chosen the main raw material for the development of the beverage production technology. It is characterized by a high content of bioactive components that increase the adaptive abilities of human body. The purpose is to use ultrasonic extraction method in the preparation of functionally directed actions beverages. Extractor with submerged ultrasonic emitter was used as an experimental device. The essence of its operation is as follows: a mixture of the extractant and the plant substrate in different ratios was loaded into a container with the emitter, then the ultrasonic generator was turned on. The vibrations of ultrasonic frequency (22 kHz made high-frequency mechanical vibrations that caused the formation of intense cavitation areas and diffuse dissolution of cell substrates in the extractant in the treated mixture. The ultrasonic extraction technique involves brief contact of berries and extractant (up to 15 minutes upon application of ultrasonic vibrations. With an increase in exposure time, the yield of biologically active substances increases to reach an equilibrium state corresponding to the most complete exhaustion of raw materials. All this leads to a significant acceleration of the transition from the active ingredients from the raw materials into the extractant to obtain a product with improved physical - and chemical, organoleptic characteristics, as well as a higher antioxidant activity.

  18. Propolis Standardized Extract (EPP-AF®, an Innovative Chemically and Biologically Reproducible Pharmaceutical Compound for Treating Wounds

    Directory of Open Access Journals (Sweden)

    Andresa Aparecida Berretta, Andresa Piacezzi Nascimento, Paula Carolina Pires Bueno, Mirela Mara de Oliveira Lima Leite Vaz, Juliana Maldonado Marchetti

    2012-01-01

    Full Text Available The aim of this study was to develop a formulation, containing the propolis standardized extract (EPP-AF®, which can assist in the healing of skin lesions. To achieve this objective the antimicrobial activity and chemical composition of the propolis extract was determined. The final product was subjected to in vitro and in vivo pre-clinical evaluation. The broth macrodilution method was used to determine the antimicrobial activity of the extracts and formulations against the microorganisms most commonly found in burns, Pseudomonas aeruginosa, Klebsiella pneumoniae, Escherichia coli, Staphylococcus aureus and Staphylococcus epidermidis. Wistar rats with puncture wounded skin were used to evaluate the wound healing properties of propolis. The results of chemical and biological characterization demonstrated the batch-to-batch reproducibility of the standardized extract which is an unprecedented result. The antimicrobial and wound healing activity of the pharmaceutical studied showed the best results when samples contain 3.6% propolis, suggesting that this is the most promising composition.

  19. Facial Feature Extraction Method Based on Coefficients of Variances

    Institute of Scientific and Technical Information of China (English)

    Feng-Xi Song; David Zhang; Cai-Kou Chen; Jing-Yu Yang

    2007-01-01

    Principal Component Analysis (PCA) and Linear Discriminant Analysis (LDA) are two popular feature ex- traction techniques in statistical pattern recognition field. Due to small sample size problem LDA cannot be directly applied to appearance-based face recognition tasks. As a consequence, a lot of LDA-based facial feature extraction techniques are proposed to deal with the problem one after the other. Nullspace Method is one of the most effective methods among them. The Nullspace Method tries to find a set of discriminant vectors which maximize the between-class scatter in the null space of the within-class scatter matrix. The calculation of its discriminant vectors will involve performing singular value decomposition on a high-dimensional matrix. It is generally memory- and time-consuming. Borrowing the key idea in Nullspace method and the concept of coefficient of variance in statistical analysis we present a novel facial feature extraction method, i.e., Discriminant based on Coefficient of Variance (DCV) in this paper. Experimental results performed on the FERET and AR face image databases demonstrate that DCV is a promising technique in comparison with Eigenfaces, Nullspace Method, and other state-of-the-art facial feature extraction methods.

  20. Comparisons of metal leachability for various wastes by extraction and leaching methods.

    Science.gov (United States)

    Chang, E E; Chiang, P C; Lu, P H; Ko, Y W

    2001-10-01

    The objective of this research was to evaluate three extraction tests, i.e., toxicity characteristic leaching procedures (TCLP), extraction procedure (EP), and American Society for Testing and Materials (ASTM) methods, for their ability to extract metals in chemical sludge and incineration bottom ash, in terms of the precision of analytical results. Typical chemical sludges, including the electroplating and dye-stuff sludges, the municipal solid waste incineration bottom ash, the leather debris, and the steel-mill bottom residue containing Cd, Cr, Cu, Pb, and Zn were prepared for the lysimetry test (dynamic testing) to compare with the extraction results. Results show that for bottom residue and dye-stuff sludge, the concentration of metal leached was almost the same between the lysimetry leaching and the TCLP tests. The metal concentration followed the order: TCLP approximately = EP > ASTM. TCLP and EP exhibited almost the same relative standard deviation (RSD) value. Therefore, the results of the TCLP tests for bottom residue and dye-stuff sludge, which have a low metal content and alkalinity, can be used to estimate the metal concentration leached by typical acid rain in Taiwan; whereas the ASTM extraction test may be a better indicator of the lysimetry test.

  1. An Extended SPAC Method For Dispersion Curves Extraction From Microtremor

    Science.gov (United States)

    Wang, J.; Chen, X.

    2013-12-01

    The spatial autocorrelation (SPAC) method is a useful tool for imaging subsurface structure from ambient noise. The traditional SPAC method assumes that the ambient noise consists of Rayleigh wave without higher modes. We propose an extended SPAC method to extract higher modes Rayleigh wave dispersion curves which contain useful information for improving the inverted S-wave velocity model. We use discrete wavenumber integral method and harmonic wave superposition to synthesize microtremor for 1-D layered model. We analyse the ambient noise include higher modes of surface waves, and the SPAC coefficients is composed of each component by its power fraction. We can extract higher mode dispersion curves using the orthogonality relations of Bessel function.

  2. Spindle extraction method for ISAR image based on Radon transform

    Science.gov (United States)

    Wei, Xia; Zheng, Sheng; Zeng, Xiangyun; Zhu, Daoyuan; Xu, Gaogui

    2015-12-01

    In this paper, a method of spindle extraction of target in inverse synthetic aperture radar (ISAR) image is proposed which depends on Radon Transform. Firstly, utilizing Radon Transform to detect all straight lines which are collinear with these line segments in image. Then, using Sobel operator to detect image contour. Finally, finding all intersections of each straight line and image contour, the two intersections which have maximum distance between them is the two ends of this line segment and the longest line segment of all line segments is spindle of target. According to the proposed spindle extraction method, one hundred simulated ISAR images which are respectively rotated 0 degrees, 10 degrees, 20 degrees, 30 degrees and 40 degrees in counterclockwise are used to do experiment and the proposed method and the detection results are more close to the real spindle of target than the method based on Hough Transform .

  3. Antioxidant activity and total phenolic compounds of Dezful sesame cake extracts obtained by classical and ultrasound-assisted extraction methods

    OpenAIRE

    2014-01-01

    Sesame cake is a by-product of sesame oil industry. In this study, the effect of extraction methods (maceration and sonication) and solvents (ethanol, methanol, ethanol/water (50:50), methanol/water (50:50), and water) on the antioxidant properties of sesame cake extracts are evaluated to determine the most suitable extraction method for optimal use of this product. Total phenolic content is measured according to the Folin–Ciocalteu method and antioxidant activities of each extract are evalua...

  4. Chemical properties of tannic extracts from bark of Pinus oocarpa and their use as adhesive

    Directory of Open Access Journals (Sweden)

    Michel Cardoso Vieira

    2014-03-01

    Full Text Available This work evaluated the properties of aqueous extracts obtained from the bark of Pinus oocarpa under addition of sodium sulfite and sodium bisulfite and the possibility of employment of tannins from the bark as an adhesive for bonding wood. After evaluation of the chemical properties of tannic extracts it was decided to employ the extraction with distilled water under addition of / 5% sodium sulfite to prepare for the tannin-formaldehyde adhesive. Adhesive phenol formaldehyde and urea-formaldehyde were modified with 10% tannin Pinus oocarpa and the effect of this addition on the quality of the adhesive was evaluated. The addition from the bark of Pinus oocarpa showed that it is possible to use pure tannin as an adhesive because of its good gluing characteristics. The addition of tannic extract to synthetic adhesives contributed to increase viscosity values. Thus the substitution of synthetic adhesives by tannins is possible only up to 10%.

  5. A Comparison of DNA Extraction Methods using Petunia hybrida Tissues

    OpenAIRE

    Tamari, Farshad; Hinkley, Craig S.; Ramprashad, Naderia

    2013-01-01

    Extraction of DNA from plant tissue is often problematic, as many plants contain high levels of secondary metabolites that can interfere with downstream applications, such as the PCR. Removal of these secondary metabolites usually requires further purification of the DNA using organic solvents or other toxic substances. In this study, we have compared two methods of DNA purification: the cetyltrimethylammonium bromide (CTAB) method that uses the ionic detergent hexadecyltrimethylammonium brom...

  6. Quantification of total fatty acids in microalgae: comparison of extraction and transesterification methods.

    Science.gov (United States)

    Cavonius, Lillie R; Carlsson, Nils-Gunnar; Undeland, Ingrid

    2014-11-01

    Determination of microalgaes' fatty acid content is often done with chloroform and methanol according to the Bligh and Dyer extraction, though faster methods exist. A number of comparisons between the Bligh and Dyer and faster methods have resulted in contradicting data, possibly due to differences in algae used and the different versions of the Bligh and Dyer method applied. Here, various forms of direct-transesterification (D-TE) and two-step transesterification (2-TE), including three versions developed in our lab, are compared with the original Bligh and Dyer (Can J Biochem Physiol 37: 911-917, 1959) extraction and two modifications thereof (Lee et al. J AOAC Int 79:487-492, 1996, and our own acidified version) on microalgae with different cell walls: Isochrysis galbana, Nannochloropsis oculata, and Phaeodactylum tricornutum. In total, fatty acid extracts from 11 methods were separated and quantified by gas chromatography with mass spectrometry. Results show that, for N. oculata and P. tricornutum, methods based on chloroform-methanol underestimated the fatty acid content compared with the 2-TE and D-TE methods, which gave similar results. Moreover, D-TE methods are faster than chloroform-methanol methods and use chemicals that are less toxic. Of the D-TE methods, the ones using hydrochloric acid and sulfuric acid recovered the most fatty acids, while boron trifluoride recovered slightly less. The main qualitative difference between the fatty acids recovered was that the chloroform-methanol methods recovered less saturated fatty acids in P. tricornutum.

  7. Development of Directly Suspended Droplet Micro Extraction Method for Extraction of Organochlorine Pesticides in Water Samples

    Directory of Open Access Journals (Sweden)

    Seyed Kamal Rajabi

    2015-04-01

    Full Text Available A simple and efficient directly suspended droplet micro extraction in conjunction with gas chromatography-electron capture detector (GC-ECD has been developed for extraction and determination of organochlorine pesticides (OCPs from water samples. In this technique a micro drop of 1-dodecanol is delivered to the surface of an aqueous sample while being agitated by a stirring bar in the bulk of solution. Factors relevant to the extraction efficiency were studied and optimized. The optimized extraction conditions were extraction solvent: 1-dodecanol; extraction temperature: 60◦C; NaCl concentration: 0.5M; solvent extraction volume: 10 µL; stirring rate: 800rpm and the extraction time: 20 min. The detection limits of the method were in the range of 0.066–1.85 ngL−1, relation standard deviation (n=5 range were 0.102 - 0.964. A good linearity (r 2 ≥0.995 and a relatively broad dynamic linear range (25–2600ng.L−1 were obtained and recoveries of method were in the range of 90.729% - 102.343%. Finally, the proposedmethod was successfully utilized for pre concentration and determination of OCPs in different real samples.We successfully developed a method based on the DSDME technique combined with capillary GC-ECD for the analysis of OCPs in the water samples and compared with the conventional sample preparation method such as LPME. Normal 0 false false false EN-US X-NONE AR-SA /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-parent:""; mso-padding-alt:0cm 5.4pt 0cm 5.4pt; mso-para-margin-top:0cm; mso-para-margin-right:0cm; mso-para-margin-bottom:10.0pt; mso-para-margin-left:0cm; line-height:115%; mso-pagination:widow-orphan; font-size:11.0pt; font-family:"Calibri","sans-serif"; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-hansi-font-family:Calibri; mso

  8. New Multipole Method for 3-D Capacitance Extraction

    Institute of Scientific and Technical Information of China (English)

    Zhao-Zhi Yang; Ze-Yi Wang

    2004-01-01

    This paper describes an effcient improvement of the multipole accelerated boundary element method for 3-D capacitance extraction.The overall relations between the positions of 2-D boundary elements are considered instead of only the relations between the center-points of the elements,and a new method of cube partitioning is introduced.Numerical results are presented to demonstrate that the method is accurate and has nearly linear computational growth as O(n),where n is the number of panels/boundary elements.The proposed method is more accurate and much faster than Fastcap.

  9. Chemical composition and biological activities of polar extracts and essential oil of rose-scented geranium, Pelargonium graveolens.

    Science.gov (United States)

    Boukhris, Maher; Simmonds, Monique S J; Sayadi, Sami; Bouaziz, Mohamed

    2013-08-01

    Pelargonium graveolens (Geraniaceae) was characterized with respect to its chemical composition, antioxidant potential and antimicrobial activities. This is the first investigation focusing on the comparison of both essential oil and polar extracts from this species. The chemical composition of the essential oil of the aerial parts of P. graveolens was analyzed by gas chromatography/mass spectrometry. The main constituents of the oil were found to be β-citronellol (21.9%), citronellyl formate (13.2%), geraniol (11.1%), 10-epi-γ-eudesmol (7.9%), geranyl formate (6.2%) and (l)-linalool (5.6%). Nine flavonoids were identified by high-performance liquid chromatography-MS in leaf and flower extracts. Kaempferol 3-O-rhamnoside-glucoside, isorhamnetin aglycone, quercetin 3-O-glucoside, kaempferol 3,7-di-O-glucoside, quercetin 3-O-pentose and kaempferol 3-O-glucoside, quercetin 3-O-rhamnoside-glucoside, quercetin 3-O-pentoside-glucoside, myrisetin 3-O-glucoside-rhamnoside flavonoids were detected in methanolic and aqueous extracts, respectively. The total flavonoids ranged between 29.9 and 78.2 mg QE/g in flower water and methanol extracts, respectively, and 22.5 and 71.2 mg QE/g dry weight in leaf water and methanol extracts, respectively. The highest antioxidant activities using two methods of free radical scavenging capacities were obtained with the essential oil (9.16 mM of Trolox and 2.68 µg/ml). All P. graveolens essential oil and polar extracts were active against at least one bacterium. Copyright © 2012 John Wiley & Sons, Ltd.

  10. Spoken Language Identification Using Hybrid Feature Extraction Methods

    CERN Document Server

    Kumar, Pawan; Mishra, A N; Chandra, Mahesh

    2010-01-01

    This paper introduces and motivates the use of hybrid robust feature extraction technique for spoken language identification (LID) system. The speech recognizers use a parametric form of a signal to get the most important distinguishable features of speech signal for recognition task. In this paper Mel-frequency cepstral coefficients (MFCC), Perceptual linear prediction coefficients (PLP) along with two hybrid features are used for language Identification. Two hybrid features, Bark Frequency Cepstral Coefficients (BFCC) and Revised Perceptual Linear Prediction Coefficients (RPLP) were obtained from combination of MFCC and PLP. Two different classifiers, Vector Quantization (VQ) with Dynamic Time Warping (DTW) and Gaussian Mixture Model (GMM) were used for classification. The experiment shows better identification rate using hybrid feature extraction techniques compared to conventional feature extraction methods.BFCC has shown better performance than MFCC with both classifiers. RPLP along with GMM has shown be...

  11. Analysis of chemical warfare agents in organic liquid samples with magnetic dispersive solid phase extraction and gas chromatography mass spectrometry for verification of the chemical weapons convention.

    Science.gov (United States)

    Singh, Varoon; Purohit, Ajay Kumar; Chinthakindi, Sridhar; Goud, Raghavender D; Tak, Vijay; Pardasani, Deepak; Shrivastava, Anchal Roy; Dubey, Devendra Kumar

    2016-05-27

    A simple, sensitive and low temperature sample preparation method is developed for detection and identification of Chemical Warfare Agents (CWAs) and scheduled esters in organic liquid using magnetic dispersive solid phase extraction (MDSPE) followed by gas chromatography-mass spectrometry analysis. The method utilizes Iron oxide@Poly(methacrylic acid-co-ethylene glycol dimethacrylate) resin (Fe2O3@Poly(MAA-co-EGDMA)) as sorbent. Variants of these sorbents were prepared by precipitation polymerization of methacrylic acid-co-ethylene glycol dimethacrylate (MAA-co-EGDMA) onto Fe2O3 nanoparticles. Fe2O3@poly(MAA-co-EGDMA) with 20% MAA showed highest recovery of analytes. Extractions were performed with magnetic microspheres by MDSPE. Parameters affecting the extraction efficiency were studied and optimized. Under the optimized conditions, method showed linearity in the range of 0.1-3.0μgmL(-1) (r(2)=0.9966-0.9987). The repeatability and reproducibility (relative standard deviations (RSDs) %) were in the range of 4.5-7.6% and 3.4-6.2% respectively for organophosphorous esters in dodecane. Limits of detection (S/N=3/1) and limit of quantification (S/N=10/1) were found to be in the range of 0.05-0.1μgmL(-1) and 0.1-0.12μgmL(-1) respectively in SIM mode for selected analytes. The method was successfully validated and applied to the extraction and identification of targeted analytes from three different organic liquids i.e. n-hexane, dodecane and silicon oil. Recoveries ranged from 58.7 to 97.3% and 53.8 to 95.5% at 3μgmL(-1) and 1μgmL(-1) spiking concentrations. Detection of diethyl methylphosphonate (DEMP) and O-Ethyl S-2-diisopropylaminoethyl methylphosphonothiolate (VX) in samples provided by the Organization for Prohibition of Chemical Weapons Proficiency Test (OPCW-PT) proved the utility of the developed method for the off-site analysis of CWC relevant chemicals.

  12. Availability of heavy metals in contaminated soil evidenced by chemical extractants

    Directory of Open Access Journals (Sweden)

    Maria Ligia de Souza Silva

    2012-06-01

    Full Text Available Heavy metals have been accumulating in Brazilian soils, due to natural processes, such as atmospheric deposition, or human industrial activities. For certain heavy metals, when in high concentrations in the soil, there is no specific extractant to determine the availability of these elements in the soil. The objective of the present study was to evaluate the availability of Cd, Cu, Fe, Mn, Pb and Zn for rice and soybeans, using different chemical extractants. In this study we used seven soil samples with different levels of contamination, in completely randomized experimental design with four replications. We determined the available concentrations of Cd, Cu, Fe, Mn, Pb and Zn extracted by Mehlich-1, HCl 0.1 mol L-1, DTPA, and organic acid extractants and the contents in rice and soybeans, which extracts were analyzed by ICP-OES. It was observed that Mehlich-1, HCl 0.1 mol L-1 and DTPA extractants were effective to assess the availability of Cd, Cu, Pb and Zn for rice and soybeans. However, the same was not observed for the organic acid extractant.

  13. Chemical forms and extractability of iron in sediments of three contrasting lakes of China and UK

    Institute of Scientific and Technical Information of China (English)

    ZHOU Qi-xing; Gibson C.E.; Stewart B.M.

    2003-01-01

    Iron is a limiting factor for the eutrophication of lakes, especially those lakes that are enriched with phosphorus. Extractability of iron in sediments of West Lake and Taihu Lake in China and Lower Lough Erne in Northern Ireland of UK was comparatively investigated on the basis of analysing chemical forms of iron using different extractants. It was shown that extractable iron in sediments of the lakes was greatly different using various extractants. Reactive iron or easily released iron such as "active" iron oxides, total free iron oxide and water-soluble iron was not high, only accounting for 0.01%-0.15% of total iron. The efficiency of the extractants for exchangeable iron was decreased in the sequence 0.1 mol/L HCl> DTPA + TEA mixed solution > 1 mol/L NH4OAc > 0.5 mol/L MgCl2 = 0.5 mol/L CaCl2. It seems that the complexion of iron by organic matter was not strong because the concentration of organically bound iron was significantly lower than the concentration it was forecasted. Extractable iron is not entirely consistent with or dependent on total iron in lake sediments. To a certain extent,phosphate can inhibit the release of iron in sediments of the lakes. The selection of extractants is thus the first key step to evaluate bioavailability of iron in lake sediments.

  14. Chemical analysis and toxicity of seaweed extracts with inhibitory activity against tropical fruit anthracnose fungi.

    Science.gov (United States)

    Machado, Levi Pompermayer; Matsumoto, Silvia Tamie; Jamal, Claudia Masrouah; da Silva, Marcelo Barreto; Centeno, Danilo da Cruz; Colepicolo Neto, Pio; de Carvalho, Luciana Retz; Yokoya, Nair S

    2014-07-01

    Banana and papaya are among the most important crops in the tropics, with a value amounting to millions of dollars per year. However, these fruits suffer significant losses due to anthracnose, a fungal disease. It is well known that certain seaweed extracts possess antifungal activity, but no published data appear to exist on the practical application of this property. In the present study, five organic Brazilian seaweed extracts were screened for their activity against banana and papaya anthracnose fungi. Furthermore, cytotoxic and mutagenic effects of the extracts were evaluated by the brine shrimp lethality assay and the Allium cepa root-tip mutagenicity test respectively, while their major components were identified by gas chromatography/mass spectrometry. Strong fungus-inhibitory effects of Ochtodes secundiramea and Laurencia dendroidea extracts were observed on both papaya (100 and 98% respectively) and banana (89 and 78% respectively). This impressive activity could be associated with halogenated terpenes, the major components of both extracts. Only Hypnea musciformis extract showed cytotoxic and mutagenic effects. The results of this study suggest the potential use of seaweed extracts as a source of antifungal agents with low toxicity to control anthracnose in papaya and banana during storage. © 2013 Society of Chemical Industry.

  15. Lipid extraction methods from microalgae: A comprehensive review

    Directory of Open Access Journals (Sweden)

    Ranjith Kumar eR

    2015-01-01

    Full Text Available Energy security has become a serious global issue and a lot of research is being carried out to look for economocially viable and environment-friendly alternatives. The only solution that appears to to meet the futuristic needs is the use of renewable energy. Although various forms of renewable energy are being currently used, the prospects of producing carbon-neutral biofuels from microalgae appears bright because of its unique features such as suitability of growing in open ponds required for production of a commodity product, high CO2-sequestering capability, ability to grow in wastewater/seawater/brackishwater and high lipid productivity. The major process constraint in the microalgal biofuel technology is the cost-effective and efficient extraction of lipids. The objective of this article is to provide a comprehensive review on various methods of lipid extraction from microalgae available till date, as well as to discuss their advantages and disadvantages. The article covers all areas of lipid extraction procedures including solvent extraction procedures, mechanical approaches and solvent-free procedures apart from some of the latest extraction technologies. A lot more research efforts are required in this area for successful implementation of this technology at a production scale.

  16. Chemical composition of Nigella sativa L. seed extracts obtained by supercritical carbon dioxide.

    Science.gov (United States)

    Tiruppur Venkatachallam, Suresh Kumar; Pattekhan, Hajimalang; Divakar, Soundar; Kadimi, Udaya Sankar

    2010-12-01

    Chemical composition of black cumin (Nigella sativa L.) seed extracts obtained by supercritical carbon dioxide at two different conditions that result in total extract (28 MPa/50°C, SFE 1) and major volatile part (12 MPa/40°C, SFE 2) and essential oil obtained by hydrodistillation of SFE-1 (HD SFE). SFE have been carried out to characterize the compounds and the variation of quinones and phenolics. The extracts were analysed by GC and GC-MS and the presence of phenolic compounds was further confirmed by 2D HSQCT (1)H and (13)C NMR spectroscopy. Forty-seven volatile compounds were detected where sixteen compounds were reported for the first time in the oil of this seed. Moreover, thymoquinone (TQ), dithymoquinone (DTQ), thymohydroquinone (THQ) and thymol (THY) were the major phenolic compounds. It can be concluded that the chemical composition of extracts obtained by SC CO2 extraction of the seeds showed better recovery of phenolic compounds than HD SFE and proved the occurrence of thermally labile or photosensitive bioactive volatiles of four major quinonic phenol compounds.

  17. METHODS FOR INVESTIGATION OF CHEMICAL CHARACTERISTICS IN POLYMER MATERIALS

    Directory of Open Access Journals (Sweden)

    V. V. Kuzmich

    2017-01-01

    Full Text Available A method for measuring polymer chemical resistance by dipping specimens in chemical reagents is a standard investigation procedure used in chemical industry (Standards ASTM D543, ISO 155. Such method has been used only for comparative evaluation of chemical resistance for various materials in a number of typical reagents. The results obtained with the help of the method do not provide the possibility directly to estimate application of the given material for this or that products which are used in contact with various chemical environments. It is necessary to take into account such limitations of theused testing results as duration of environmental exposure, temperature and reagent concentration in the medium. If it is as sumed that the method is applied under conditions when a product is continuously contacting with liquid then the results of short-term testings can be used only with the purpose to exclude the least adequate materials. Testing equipment has included a precision chemical balance, a micrometer, a container for immersion medium, a thermostat for setting and maintaining the required temperature and devices for measuring physical properties. Dimensions and type of a test specimen are specified by the shape of material which is used for testing. At least three specimens are needed for testing in every reagent. Changes in dimension and weight are measured for every specimen. The specimen is placed in container for 7 days in standard laboratory atmosphere where it should not touch a bottom or walls of the container.

  18. Mild and Moderate Extraction Methods to Assess Potentially Available Soil Organic Nitrogen

    Directory of Open Access Journals (Sweden)

    Bruno Boscov Braos

    Full Text Available ABSTRACT The use of chemical methods to assess the soil organic nitrogen (N potentially available to plants is not a common practice in Brazil. However, associated with others, this tool might improve efficiency in the use of waste and nitrogen fertilizers. In our study, chemical methods were tested to assess potentially available soil N in samples of 17 representative soils of the western plateau of the state of São Paulo (10 Oxisols and 7 Ultisols. Available soil N was extracted from the collected soil samples using moderate (ISNT-Illinois Soil Nitrogen Test and mild (hot water and heated solutions of 2 mol L-1 KCl and 0.01 mol L-1 CaCl2 extraction methods. The levels of potentially available N obtained from these chemical methods were correlated with dry matter (DM and N uptake (Nup by corn plants grown in pots in a greenhouse experiment carried out with the same 17 soil samples. The ISNT method showed the highest available N extraction capacity, whereas hot water showed the lowest capacity, followed closely by the hot 0.01 mol L-1 CaCl2 solution. Despite the differences among the quantities of available N extracted, the methods correlated with each other and with DM and Nup, but the values from the ISNT method showed the lowest correlation with plant variables (rDM = 0.67** and rNup = 0.81**. Procedures of extraction with water or 0.01 mol L-1 CaCl2 heated for 16 h, and 2 mol L-1 KCl heated for 4 h, resulted in similar correlation values (r with plant DM and Nup. Thus, water (rDM = 0.77** and rNup = 0.90** and 0.01 mol L-1 CaCl2 (rDM = 0.82** and rNup = 0.93** heated for 16 h can be recommended as the best options for N extraction.considering the possibility for predicting N availability, lower generation of waste, and lower cost of analysis.

  19. Assessment of soil stabilization by chemical extraction and bioaccumulation using earthworm, Eisenia fetida

    Science.gov (United States)

    Lee, Byung-Tae; Abd Aziz, Azilah; Han, Heop Jo; Kim, Kyoung-Woong

    2014-05-01

    Soil stabilization does not remove heavy metals from contaminated soil, but lowers their exposures to ecosystem. Thus, it should be evaluated by measuring the fractions of heavy metals which are mobile and/or bioavailable in soils. The study compared several chemical extractions which intended to quantify the mobile or bioaccessible fractions with uptake and bioaccumulation by earthworm, Eisenia fetida. Soil samples were taken from the abandoned mine area contaminated with As, Cd, Cu, Pb and/or Zn. To stabilize heavy metals, the soils were amended with limestone and steel slag at 5% and 2% (w/w), respectively. All chemical extractions and earthworm tests were applied to both the contaminated and the stabilized soils with triplicates. The chemical extractions consisted of six single extractions which were 0.01M CaCl2 (unbufferred), EDTA or DTPA (chelating), TCLP (acidic), Mehlich 3 (mixture), and aqua regia (peudo-total). Sequential extractions were also applied to fractionate heavy metals in soils. In earthworm tests, worms were exposed to the soils for uptake of heavy metals. After 28 days of exposure to soils, worms were transferred to clean soils for elimination. During the tests, three worms were randomly collected at proper sampling events. Worms were rinsed with DI water and placed on moist filter paper for 48 h for depuration. Filter paper was renewed at 24 h to prevent coprophagy. The worms were killed with liquid nitrogen, dried in the oven, and digested with aqua regia for ICP-MS analysis. In addition to the bioaccumulation, several toxicity endpoints were observed such as burrowing time, mortality, cocoon production, and body weight changes. Toxicokinetics was applied to determine the uptake and elimination heavy metals by the earthworms. Bioaccumulation factor (BAF) was estimated using total metal concentrations and body burdens. Pearson correlation and simple linear regression were applied to evaluate the relationship between metal fractions by single

  20. Evaluation of chemical composition, antioxidant, antibacterial, cytotoxic and apoptotic effects of Aloysia citrodora extract on colon cancer cell line

    Directory of Open Access Journals (Sweden)

    Amir Mirzaie

    2016-06-01

    Full Text Available Background: Aloysia citrodora belongs to the Verbenaceae family of plants, a well-known herbal medicine in Iran. The aim of the present study was to investigate the chemical composition, antioxidant, antibacterial, cytotoxic and apoptotic effect of A. citrodora extract against human colon cancer (HT29 cells by using real-time polymerase chain reaction and flow-cytometry methods. Methods: This experimental study was carried out in Islamic Azad University, East Tehran Branch, from March to September of 2014. At first, the A. citrodora chemical constituents were analyzed by gas chromatography-mass spectrometry (GC-MS technique. In addition, antioxidant assay, antibacterial and anti-cancer effect was performed using 1,1-diphenyl-2-picrylhydrazyl (DPPH, disk diffusion and 3-(4,5-dimethylthiazol-2-yl-2,5-diphenyltetrazolium bromide (MTT methods, respectively. The half maximal inhibitory concentration (IC50 value was calculated. We extracted total RNA molecules by using RNX solution, after which cDNA was synthesized. Finally, the pro-apoptotic (Bax and anti-apoptotic (Bcl2 gene expression was performed by real-time polymerase chain reaction and apoptotic effects were analyzed using Flow-cytometry method. Results: GC-MS analysis of Aloysia citrodora extract was shown 37 major components and the most frequent component was belonged to Spathulenol (17.57% and Caryophyllene oxide (15.15% The antioxidant activity of the extract was IC50= 0.6±0.03 mg/ml. The maximum and minimum antibacterial effects of extract were belonged to gram-negative and gram-positive bacteria, respectively. Cytotoxic results revealed that the A.citrodora extract have IC50= 20.1±0.78 mg/ml against colon cancer (HT29 cell line and real-time polymerase chain reaction results showed the expression level of Bax and Bcl2 was increased and decreased respectively in colon cancer cell line (3.470±0.72 (P< 0.05, 0.43±0.35 (P< 0.05. In addition, the flow-cytometry results indicated the 38

  1. Rapid methods to extract DNA and RNA from Cryptococcus neoformans.

    Science.gov (United States)

    Bolano, A; Stinchi, S; Preziosi, R; Bistoni, F; Allegrucci, M; Baldelli, F; Martini, A; Cardinali, G

    2001-12-01

    Extraction of nucleic acids from the pathogenic yeast Cryptococcus neoformans is normally hampered by a thick and resistant capsule, accounting for at least 70% of the whole cellular volume. This paper presents procedures based on mechanical cell breakage to extract DNA and RNA from C. neoformans and other capsulated species. The proposed system for DNA extraction involves capsule relaxation by means of a short urea treatment and bead beating. These two steps allow a consistent extraction even from strains resistant to other procedures. Yield and quality of DNA obtained with the proposed method were higher than those obtained with two earlier described methods. This protocol can be extended to every yeast species and particularly to those difficult to handle for the presence of a capsule. RNA purification is accomplished using an original lysing matrix and the FastPrep System (Bio101) after a preliminary bead beating treatment. Yields range around 1 mg RNA from 15 ml overnight culture (10(9) cells), RNA appears undegraded, making it suitable for molecular manipulations.

  2. Optimal fractionation and bioassay plans for isolation of synergistic chemicals: The subtractive-combination method.

    Science.gov (United States)

    Byers, J A

    1992-09-01

    Studies of chemical ecology of an organism are founded on the isolation and identification of a semiochemical, often comprised of two or more synergistic compounds (each Synergist alone has little activity, but presented together they are bioactive). Chromatographie fractionation and bioassay methods of binary splitting, additive combination, and subtractive combination are compared for efficiency in isolating synergists. Formulas are derived for the latter two methods that calculate the expected number of bioassay tests required for isolation of from two to five synergists from biological extracts with any number of compounds, depending on the number of initial (major) Chromatographic fractions. A computer program based on the formulas demonstrates the superiority of the subtractive-combination method. Simulations with the program were used to determine the optimal number of initial fractions for the additive- and subtractive-combination methods when isolating two to five synergists from extracts of from 25 to 1200 compounds. Methods of bioassay, isolation, identification, and field testing of semiochemicals are discussed.

  3. Byproducts of orange extraction: influence of different treatments in fiber composition and physical and chemical parameters

    Directory of Open Access Journals (Sweden)

    Juliana Maria de Mello Andrade

    2014-09-01

    Full Text Available In this work we evaluated the variability in fiber content and physical and chemical parameters of byproducts from orange juice extraction. Five different treatments and two drying methods were evaluated. The results indicate that drying by lyophilization was better than that drying in an oven. The pH ranged from approximately 3.47 to 3.96. The variation in moisture values was 9.22% ± 0.02 to 18.48 ± 0.52%. The total dietary fiber content in the resulting flours ranged from 42.44% to 62.74%. The soluble and insoluble dietary fiber contents differed among the samples, ranging from 5.04% to 19.95% for the first fiber type, and 23.96% to 57.70% for the second. In conclusion, three treatments, associated with freeze-drying, showed promising results in the development of fiber-rich product. However, some modifications are needed, as well as further analysis, to guarantee the benefits of these products for human health. This study contributes to the possible application of industrial byproducts.

  4. Chemical Methods to Knock Down the Amyloid Proteins

    Directory of Open Access Journals (Sweden)

    Na Gao

    2017-06-01

    Full Text Available Amyloid proteins are closely related with amyloid diseases and do tremendous harm to human health. However, there is still a lack of effective strategies to treat these amyloid diseases, so it is important to develop novel methods. Accelerating the clearance of amyloid proteins is a favorable method for amyloid disease treatment. Recently, chemical methods for protein reduction have been developed and have attracted much attention. In this review, we focus on the latest progress of chemical methods that knock down amyloid proteins, including the proteolysis-targeting chimera (PROTAC strategy, the “recognition-cleavage” strategy, the chaperone-mediated autophagy (CMA strategy, the selectively light-activatable organic and inorganic molecules strategy and other chemical strategies.

  5. SAR Data Fusion Imaging Method Oriented to Target Feature Extraction

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    Yang Wei

    2015-02-01

    Full Text Available To deal with the difficulty for target outlines extracting precisely due to neglect of target scattering characteristic variation during the processing of high-resolution space-borne SAR data, a novel fusion imaging method is proposed oriented to target feature extraction. Firstly, several important aspects that affect target feature extraction and SAR image quality are analyzed, including curved orbit, stop-and-go approximation, atmospheric delay, and high-order residual phase error. Furthermore, the corresponding compensation methods are addressed as well. Based on the analysis, the mathematical model of SAR echo combined with target space-time spectrum is established for explaining the space-time-frequency change rule of target scattering characteristic. Moreover, a fusion imaging strategy and method under high-resolution and ultra-large observation angle range conditions are put forward to improve SAR quality by fusion processing in range-doppler and image domain. Finally, simulations based on typical military targets are used to verify the effectiveness of the fusion imaging method.

  6. Complementary methods for extracting road centerlines from IKONOS imagery

    Science.gov (United States)

    Haverkamp, Donna S.; Poulsen, Rick

    2003-03-01

    We present both semi-automated and automated methods for road extraction using IKONOS imagery. The automated method extracts straight-line, gridded road networks by inferring a local grid structure from initial information and then filling in missing pieces using hypothesization and verification. This can be followed by the semi-automated road tracker tool to approximate curvilinear roads and to fill in some of the remaining missing road structure. After a panchromatic texture analysis, our automated method incorporates an object-level processing phase which enables the algorithm to avoid problems arising from interference such as crosswalks and vehicles. It is limited, however, in that the logic is designed for reasoning concerning intersecting grid patterns of straight road segments. Many suburban areas are characterized by curving streets which may not be well-approximated using this automatic method. In these areas, missing content can be filled in using a semi-automated tool which tracks between user-supplied points. The semi-automated algorithm is based on measures derived from both the panchromatic and multispectral bands of IKONOS. We will discuss both of these algorithms in detail and how they fit into our overall solution strategy for road extraction. A presentation of current experimentation and test results will be followed by a discussion of advantages, shortcomings, and directions for future research and improvements.

  7. THE METHODS OF EXTRACTING WATER INFORMATION FROM SPOT IMAGE

    Institute of Scientific and Technical Information of China (English)

    DUJin-kang; FENGXue-zhi; 等

    2002-01-01

    Some techniques and methods for deriving water information from SPOT-4(XI) image were investigated and discussed in this paper.An algorithmoif decision-tree(DT) classification which includes several classifiers based on the spectral responding characteristics of water bodies and other objects,was developed and put forward to delineate water bodies.Another algorithm of decision-tree classification based on both spectral characteristics and auxiliary information of DEM and slope(DTDS) was also designed for water bodies extraction.In addition,supervised classification method of maximum-likelyhood classification(MLC),and unsupervised method of interactive self -organizing dada analysis technique(ISODATA) were used to extract waterbodies for comparison purpose.An index was designed and used to assess the accuracy of different methods abopted in the research.Results have shown that water extraction accuracy was variable with respect to the various techniques applied.It was low using ISODATA,very high using DT algorithm and much higher using both DTDS and MLC.

  8. Evaluation of in vitro antioxidant potential of different polarities stem crude extracts by different extraction methods of Adenium obesum

    Institute of Scientific and Technical Information of China (English)

    Mohammad Amzad Hossain; Tahiya Hilal Ali Alabri; Amira Hamood Salim Al Musalami; Md. Sohail Akhtar; Sadri Said

    2014-01-01

    Objective: To select best extraction method for the isolated antioxidant compounds from the stems of Adenium obesum.Methods:Two methods used for the extraction are Soxhlet and maceration methods. Methanol solvent was used for both extraction method. The methanol crude extract was defatted with water and extracted successively with hexane, chloroform, ethyl acetate and butanol solvents. The antioxidant potential for all crude extracts were determined by using 1, 1-diphenyl-2-picrylhydrazyl method.Results:The percentage of extraction yield by Soxhlet method is higher compared to maceration method. The antioxidant potential for methanol and its derived fractions by Soxhlet extractor method was highest in ethyl acetate and lowest in hexane crude extracts and found in the order of ethyl acetate>butanol>water>chloroform>methanol>hexane. However, the antioxidant potential for methanol and its derived fractions by maceration method was highest in butanol and lowest in hexane followed in the order of butanol>methanol>chloroform>water>ethyl acetate>hexane.Conclusions:The results showed that isolate antioxidant compounds effected on the extraction method and condition of extraction.

  9. Evaluation of in vitro antioxidant potential of different polarities stem crude extracts by different extraction methods of Adenium obesum

    Directory of Open Access Journals (Sweden)

    Mohammad Amzad Hossain

    2014-09-01

    Full Text Available Objective: To select best extraction method for the isolated antioxidant compounds from the stems of Adenium obesum. Methods: Two methods used for the extraction are Soxhlet and maceration methods. Methanol solvent was used for both extraction method. The methanol crude extract was defatted with water and extracted successively with hexane, chloroform, ethyl acetate and butanol solvents. The antioxidant potential for all crude extracts were determined by using 1, 1-diphenyl-2- picrylhydrazyl method. Results: The percentage of extraction yield by Soxhlet method is higher compared to maceration method. The antioxidant potential for methanol and its derived fractions by Soxhlet extractor method was highest in ethyl acetate and lowest in hexane crude extracts and found in the order of ethyl acetate>butanol>water>chloroform>methanol>hexane. However, the antioxidant potential for methanol and its derived fractions by maceration method was highest in butanol and lowest in hexane followed in the order of butanol>methanol>chloroform>water>ethyl acetate>hexane. Conclusions: The results showed that isolate antioxidant compounds effected on the extraction method and condition of extraction.

  10. Chemical analysis and quality control of Ginkgo biloba leaves, extracts, and phytopharmaceuticals

    OpenAIRE

    van Beek; Montoro, P.

    2009-01-01

    The chemical analysis and quality control of Ginkgo leaves, extracts, phytopharmaceuticals and some herbal supplements is comprehensively reviewed. The review is an update of a similar, earlier review in this journal [T.A. van Beek, J. Chromatogr. A 967 (2002) 21¿55]. Since 2001 over 3000 papers on Ginkgo biloba have appeared, and about 400 of them pertain to chemical analysis in a broad sense and are cited herein. The more important ones are discussed and, where relevant, compared with the b...

  11. Chemical Modification Methods of Nanoparticles of Silicon Carbide Surface

    OpenAIRE

    Anton S. Yegorov; Vitaly S. Ivanov; Alexey V. Antipov; Alyona I. Wozniak; Kseniia V. Tcarkova.

    2015-01-01

    silicon carbide exhibits exceptional properties: high durability, high thermal conductivity, good heat resistance, low thermal expansion factor and chemical inactivity. Reinforcement with silicon carbide nanoparticles increases polymer’s tensile strength and thermal stability.Chemical methods of modification of the silicon carbide surface by means of variety of reagents from ordinary molecules to macromolecular polymers are reviewed in the review.The structure of silicon carbide surface layer...

  12. Extração do fósforo do solo pelo método de Neubauer e por métodos químicos Extraction of phosphorus from the soil by the neubauer and chemical methods

    Directory of Open Access Journals (Sweden)

    R. A. Catani

    1954-01-01

    Full Text Available Nêste trabalho são apresentados dados sôbre a extração do fósforo de alguns solos do Estado de São Paulo, obtidos pelo método biológico de Neubauer e por diversos métodos químicos. Foram empregados três tipos de solo : massapé-salmourão, terra roxa misturada e arenito Bauru. As amostras de solo foram submetidas à extração do fósforo por arroz (Oryza sativa L., usando a técnica de Neubauer, com pequenas modificações. Ao mesmo tempo o fósforo foi extraído das referidas amostras com os seguintes extratores : água distilada; solução de ácido acético 0,25 normal; solução de ácido sulfúrico 0,05 normal; solução 0,025 ncrmal de fluoreto de amônio e 0,05 normal de ácido sulfúrico ; solução 0,25 normal de ácido oxálico e 0,75 normal de oxalato de potássio.The present work is an attempt to correlate the results obtained in the extraction of soil phosphorus by various chemical methods with those obtained by the biological seedling method of Neubauer. The soil samples investigated represent three of the main soil types of the State of São Paulo, Brazil. Physico-chemical properties of these soils are given in the Portuguese text. Two samples of each soil type were prepared. To one of the samples superphosphate was added at the rate of 115 kg of P2O5 per hectare before being tested. Aliquots of the two samples were then extracted with the following extractors : distilled water ; 0.25 normal acetic acid ; 0.05 normal sulfuric acid ; 0.025 normai ammonium fluoride and 0.05 normal sulfuric acid ; 0.25 normal oxalic acid and 0.75 normal potassium oxalate. Rice plants (Oryza sativa L. were used for the Neubauer test instead of rye (Secale cereale L. because they had been found to be more satisfactory in previous tests. The results, representing the average of three replications, are summarized in table 1. Figures in column 4 represent the differences between the phosphorus absorbed from 100 g of soil and from the blank

  13. A rapid chemical method for lysing Arabidopsis cells for protein analysis

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    Takano Tetsuo

    2011-07-01

    Full Text Available Abstract Background Protein extraction is a frequent procedure in biological research. For preparation of plant cell extracts, plant materials usually have to be ground and homogenized to physically break the robust cell wall, but this step is laborious and time-consuming when a large number of samples are handled at once. Results We developed a chemical method for lysing Arabidopsis cells without grinding. In this method, plants are boiled for just 10 minutes in a solution containing a Ca2+ chelator and detergent. Cell extracts prepared by this method were suitable for SDS-PAGE and immunoblot analysis. This method was also applicable to genomic DNA extraction for PCR analysis. Our method was applied to many other plant species, and worked well for some of them. Conclusions Our method is rapid and economical, and allows many samples to be prepared simultaneously for protein analysis. Our method is useful not only for Arabidopsis research but also research on certain other species.

  14. Method of extracting coal from a coal refuse pile

    Science.gov (United States)

    Yavorsky, Paul M.

    1991-01-01

    A method of extracting coal from a coal refuse pile comprises soaking the coal refuse pile with an aqueous alkali solution and distributing an oxygen-containing gas throughout the coal refuse pile for a time period sufficient to effect oxidation of coal contained in the coal refuse pile. The method further comprises leaching the coal refuse pile with an aqueous alkali solution to solubilize and extract the oxidized coal as alkali salts of humic acids and collecting the resulting solution containing the alkali salts of humic acids. Calcium hydroxide may be added to the solution of alkali salts of humic acid to form precipitated humates useable as a low-ash, low-sulfur solid fuel.

  15. Integrated Phoneme Subspace Method for Speech Feature Extraction

    Directory of Open Access Journals (Sweden)

    Park Hyunsin

    2009-01-01

    Full Text Available Speech feature extraction has been a key focus in robust speech recognition research. In this work, we discuss data-driven linear feature transformations applied to feature vectors in the logarithmic mel-frequency filter bank domain. Transformations are based on principal component analysis (PCA, independent component analysis (ICA, and linear discriminant analysis (LDA. Furthermore, this paper introduces a new feature extraction technique that collects the correlation information among phoneme subspaces and reconstructs feature space for representing phonemic information efficiently. The proposed speech feature vector is generated by projecting an observed vector onto an integrated phoneme subspace (IPS based on PCA or ICA. The performance of the new feature was evaluated for isolated word speech recognition. The proposed method provided higher recognition accuracy than conventional methods in clean and reverberant environments.

  16. Curvelet Transform-Based Denoising Method for Doppler Frequency Extraction

    Institute of Scientific and Technical Information of China (English)

    HOU Shu-juan; WU Si-liang

    2007-01-01

    A novel image denoising method based on curvelet transform is proposed in order to improve the performance of Doppler frequency extraction in low signal-noise-ratio (SNR) environment. The echo can be represented as a gray image with spectral intensity as its gray values by time-frequency transform. And the curvelet coefficients of the image are computed. Then an adaptive soft-threshold scheme based on dual-median operation is implemented in curvelet domain. After that, the image is reconstructed by inverse curvelet transform and the Doppler curve is extracted by a curve detection scheme. Experimental results show the proposed method can improve the detection of Doppler frequency in low SNR environment.

  17. Chemical reactor and method for chemically converting a first material into a second material

    Science.gov (United States)

    Kong, Peter C.

    2008-04-08

    A chemical reactor and method for converting a first material into a second material is disclosed and wherein the chemical reactor is provided with a feed stream of a first material which is to be converted into a second material; and wherein the first material is combusted in the chemical reactor to produce a combustion flame, and a resulting gas; and an electrical arc is provided which is passed through or superimposed upon the combustion flame and the resulting gas to facilitate the production of the second material.

  18. Chemical reactor and method for chemically converting a first material into a second material

    Science.gov (United States)

    Kong, Peter C.

    2008-04-08

    A chemical reactor and method for converting a first material into a second material is disclosed and wherein the chemical reactor is provided with a feed stream of a first material which is to be converted into a second material; and wherein the first material is combusted in the chemical reactor to produce a combustion flame, and a resulting gas; and an electrical arc is provided which is passed through or superimposed upon the combustion flame and the resulting gas to facilitate the production of the second material.

  19. Remediation of soils contaminated with particulate depleted uranium by multi stage chemical extraction.

    Science.gov (United States)

    Crean, Daniel E; Livens, Francis R; Sajih, Mustafa; Stennett, Martin C; Grolimund, Daniel; Borca, Camelia N; Hyatt, Neil C

    2013-12-15

    Contamination of soils with depleted uranium (DU) from munitions firing occurs in conflict zones and at test firing sites. This study reports the development of a chemical extraction methodology for remediation of soils contaminated with particulate DU. Uranium phases in soils from two sites at a UK firing range, MOD Eskmeals, were characterised by electron microscopy and sequential extraction. Uranium rich particles with characteristic spherical morphologies were observed in soils, consistent with other instances of DU munitions contamination. Batch extraction efficiencies for aqueous ammonium bicarbonate (42-50% total DU extracted), citric acid (30-42% total DU) and sulphuric acid (13-19% total DU) were evaluated. Characterisation of residues from bicarbonate-treated soils by synchrotron microfocus X-ray diffraction and X-ray absorption spectroscopy revealed partially leached U(IV)-oxide particles and some secondary uranyl-carbonate phases. Based on these data, a multi-stage extraction scheme was developed utilising leaching in ammonium bicarbonate followed by citric acid to dissolve secondary carbonate species. Site specific U extraction was improved to 68-87% total U by the application of this methodology, potentially providing a route to efficient DU decontamination using low cost, environmentally compatible reagents.

  20. Does DNA extraction affect the physical and chemical composition of historical cod (Gadus morhua) otoliths?

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Eg Nielsen, Einar; Hüssy, Karin

    2010-01-01

    conflicting interests regarding how the limited and irreplaceable otolith collections should be used. To resolve this, it is important to find out whether DNA extraction damages otoliths such that they can no longer be used for other research purposes or whether individual otoliths can be used in multiple...... applications. We examined the effects of three different DNA extraction methods on the elemental composition, the morphology, and the clarity of annual growth increments for successful age estimation of Atlantic cod (Gadus morhua) otoliths that had been archived for 0–31 years. The three extraction methods...... yielded DNA of comparable quality, and none of the methods caused major damage to the otoliths. Of the element concentrations measured, only Mg and Rb showed considerable changes resulting from DNA extraction. The physical properties of the otolith (morphology and clarity of annual growth increments) were...

  1. Assessment of Chemical Impact of Invasive Bryozoan Pectinatella magnifica on the Environment: Cytotoxicity and Antimicrobial Activity of P. magnifica Extracts.

    Science.gov (United States)

    Kollar, Peter; Šmejkal, Karel; Salmonová, Hana; Vlková, Eva; Lepšová-Skácelová, Olga; Balounová, Zuzana; Rajchard, Josef; Cvačka, Josef; Jaša, Libor; Babica, Pavel; Pazourek, Jiří

    2016-11-04

    Pectinatella magnifica, an invasive bryozoan, might significantly affect ecosystem balance due to its massive occurrence in many areas in Europe and other parts of the world. Biological and chemical analyses are needed to get complete information about the impact of the animal on the environment. In this paper, we aimed to evaluate in vitro cytotoxic effects of five extracts prepared from P. magnifica using LDH assay on THP-1 cell line. Antimicrobial activities of extracts against 22 different bacterial strains were tested by microdilution method. Our study showed that all extracts tested, except aqueous portion, demonstrated LD50 values below 100 μg/mL, which indicates potential toxicity. The water extract of P. magnifica with LD50 value of 250 μg/mL also shows potentially harmful effects. Also, an environmental risk resulting from the presence and increasing biomass of potentially toxic benthic cyanobacteria in old colonies should not be underestimated. Toxicity of Pectinatella extracts could be partially caused by presence of Aeromonas species in material, since we found members of these genera as most abundant bacteria associated with P. magnifica. Furthermore, P. magnifica seems to be a promising source of certain antimicrobial agents. Its methanolic extract, hexane, and chloroform fractions possessed selective inhibitory effect on some potential pathogens and food spoiling bacteria in the range of MIC 0.5-10 mg/mL. Future effort should be made to isolate and characterize the content compounds derived from P. magnifica, which could help to identify the substance(s) responsible for the toxic effects of P. magnifica extracts.

  2. Assessment of Chemical Impact of Invasive Bryozoan Pectinatella magnifica on the Environment: Cytotoxicity and Antimicrobial Activity of P. magnifica Extracts

    Directory of Open Access Journals (Sweden)

    Peter Kollar

    2016-11-01

    Full Text Available Pectinatella magnifica, an invasive bryozoan, might significantly affect ecosystem balance due to its massive occurrence in many areas in Europe and other parts of the world. Biological and chemical analyses are needed to get complete information about the impact of the animal on the environment. In this paper, we aimed to evaluate in vitro cytotoxic effects of five extracts prepared from P. magnifica using LDH assay on THP-1 cell line. Antimicrobial activities of extracts against 22 different bacterial strains were tested by microdilution method. Our study showed that all extracts tested, except aqueous portion, demonstrated LD50 values below 100 μg/mL, which indicates potential toxicity. The water extract of P. magnifica with LD50 value of 250 μg/mL also shows potentially harmful effects. Also, an environmental risk resulting from the presence and increasing biomass of potentially toxic benthic cyanobacteria in old colonies should not be underestimated. Toxicity of Pectinatella extracts could be partially caused by presence of Aeromonas species in material, since we found members of these genera as most abundant bacteria associated with P. magnifica. Furthermore, P. magnifica seems to be a promising source of certain antimicrobial agents. Its methanolic extract, hexane, and chloroform fractions possessed selective inhibitory effect on some potential pathogens and food spoiling bacteria in the range of MIC 0.5–10 mg/mL. Future effort should be made to isolate and characterize the content compounds derived from P. magnifica, which could help to identify the substance(s responsible for the toxic effects of P. magnifica extracts.

  3. Chemical composition and radical scavenging activity of essential oil and methanolic extract of Eremostachys azerbaijanica Rech.f. from Iran.

    Science.gov (United States)

    Asnaashari, Solmaz; Afshar, Fariba Heshmati; Ebrahimi, Atefeh; Moghadam, Sedigheh Bamdad; Delazar, Abbas

    2016-01-01

    In the present study, the chemical composition of the essential oil and methanol (MeOH) extract of aerials of E. azerbaijanica were identified. Furthermore, the free radical scavenging properties of the volatile oil as well as the MeOH extract of the plant were assessed. The essential oil of the air-dried aerial parts was obtained by hydro-distillation using a Clevenger-type apparatus. The oil was then analyzed by gas chromatography-mass spectrometry and gas chromatography with flame ionization detector. Soxhlet extraction was performed on the aerial parts using n-hexane, dichloromethane and MeOH. The MeOH extract was then subjected to solid-phase extraction using a C18 Sep-Pak cartridge. Isolation and structural elucidation of the pure components was accomplished by high-performance liquid chromatography and spectroscopic methods (UV, (1)H-NMR). The free radical scavenging properties were determined by 2, 2-diphenyl-1-picrylhydrazyl (DPPH) assay. A total of 59 components representing 95.9% of the oil constituents were identified which were primarily characterized as terpenoids or aliphatic skeletons. The major components of the oil were hexahydrofarnesyl acetone (27.1%), 2-methyl-6-propyl-dodecane (16.4%) and tricosane (9.3%). One flavonoid (luteolin-7-O-rutinoside) and one phenylethanoid (verbascoside) were also isolated and identified from the MeOH extract. The results of DPPH assays showed that the essential oil of E. azerbaijanica possessed weak free radical scavenging activity whereas the MeOH extract and its pure constituents showed significant scavenging activities in comparison with positive controls.

  4. Chemical composition and radical scavenging activity of essential oil and methanolic extract of Eremostachys azerbaijanica Rech.f. from Iran

    Directory of Open Access Journals (Sweden)

    Solmaz Asnaashari

    2016-01-01

    Full Text Available In the present study, the chemical composition of the essential oil and methanol (MeOH extract of aerials of E. azerbaijanica were identified. Furthermore, the free radical scavenging properties of the volatile oil as well as the MeOH extract of the plant were assessed. The essential oil of the air-dried aerial parts was obtained by hydro-distillation using a Clevenger-type apparatus. The oil was then analyzed by gas chromatography-mass spectrometry and gas chromatography with flame ionization detector. Soxhlet extraction was performed on the aerial parts using n-hexane, dichloromethane and MeOH. The MeOH extract was then subjected to solid-phase extraction using a C 18 Sep-Pak cartridge. Isolation and structural elucidation of the pure components was accomplished by high-performance liquid chromatography and spectroscopic methods (UV, 1 H-NMR. The free radical scavenging properties were determined by 2, 2-diphenyl-1-picrylhydrazyl (DPPH assay. A total of 59 components representing 95.9% of the oil constituents were identified which were primarily characterized as terpenoids or aliphatic skeletons. The major components of the oil were hexahydrofarnesyl acetone (27.1%, 2-methyl-6-propyl-dodecane (16.4% and tricosane (9.3%. One flavonoid (luteolin-7-O-rutinoside and one phenylethanoid (verbascoside were also isolated and identified from the MeOH extract. The results of DPPH assays showed that the essential oil of E. azerbaijanica possessed weak free radical scavenging activity whereas the MeOH extract and its pure constituents showed significant scavenging activities in comparison with positive controls.

  5. Mimicking/extracting structure and functions of natural products: synthetic approaches that address unexplored needs in chemical biology.

    Science.gov (United States)

    Hirai, Go

    2015-04-01

    Natural products are often attractive and challenging targets for synthetic chemists, and many have interesting biological activities. However, synthetic chemists need to be more than simply suppliers of compounds to biologists. Therefore, we have been seeking ways to actively apply organic synthetic methods to chemical biology studies of natural products and their activities. In this personal review, I would like to introduce our work on the development of new biologically active compounds inspired by, or extracted from, the structures of natural products, focusing on enhancement of functional activity and specificity and overcoming various drawbacks of the parent natural products.

  6. Renewable platform chemicals from directional microwave-assisted liquefaction coupling stepwise extraction of waste biomass

    Science.gov (United States)

    Junfeng Feng; Chungyun Hse; Zhongzhi Yang; Kui Wang; Jianchun Jiang; Junming Xu

    2017-01-01

    Directional microwave-assisted liquefaction and stepwise extraction are introduced for producing platform chemicals: aromatics and monosaccharides. When sulfuric acid was used as a catalyst, a 45% monosaccharides yield and a 29% aromatics yield were obtained from bamboo with 0.3 g catalyst per 18 g methanol and 2 g bamboo at 160 °C with 10 min. Approximately 78–86 wt%...

  7. Idaho Chemical Processing Plant and Plutonium-Uranium Extraction Plant phaseout/deactivation study

    Energy Technology Data Exchange (ETDEWEB)

    Patterson, M.W. [Westinghouse Idaho Nuclear Co., Idaho Falls, ID (United States); Thompson, R.J. [Westinghouse Hanford Co., Richland, WA (United States)

    1994-01-01

    The decision to cease all US Department of Energy (DOE) reprocessing of nuclear fuels was made on April 28, 1992. This study provides insight into and a comparison of the management, technical, compliance, and safety strategies for deactivating the Idaho Chemical Processing Plant (ICPP) at Westinghouse Idaho Nuclear Company (WINCO) and the Westinghouse Hanford Company (WHC) Plutonium-Uranium Extraction (PUREX) Plant. The purpose of this study is to ensure that lessons-learned and future plans are coordinated between the two facilities.

  8. Mechanomyographic Parameter Extraction Methods: An Appraisal for Clinical Applications

    Directory of Open Access Journals (Sweden)

    Morufu Olusola Ibitoye

    2014-12-01

    Full Text Available The research conducted in the last three decades has collectively demonstrated that the skeletal muscle performance can be alternatively assessed by mechanomyographic signal (MMG parameters. Indices of muscle performance, not limited to force, power, work, endurance and the related physiological processes underlying muscle activities during contraction have been evaluated in the light of the signal features. As a non-stationary signal that reflects several distinctive patterns of muscle actions, the illustrations obtained from the literature support the reliability of MMG in the analysis of muscles under voluntary and stimulus evoked contractions. An appraisal of the standard practice including the measurement theories of the methods used to extract parameters of the signal is vital to the application of the signal during experimental and clinical practices, especially in areas where electromyograms are contraindicated or have limited application. As we highlight the underpinning technical guidelines and domains where each method is well-suited, the limitations of the methods are also presented to position the state of the art in MMG parameters extraction, thus providing the theoretical framework for improvement on the current practices to widen the opportunity for new insights and discoveries. Since the signal modality has not been widely deployed due partly to the limited information extractable from the signals when compared with other classical techniques used to assess muscle performance, this survey is particularly relevant to the projected future of MMG applications in the realm of musculoskeletal assessments and in the real time detection of muscle activity.

  9. Mechanomyographic parameter extraction methods: an appraisal for clinical applications.

    Science.gov (United States)

    Ibitoye, Morufu Olusola; Hamzaid, Nur Azah; Zuniga, Jorge M; Hasnan, Nazirah; Wahab, Ahmad Khairi Abdul

    2014-12-03

    The research conducted in the last three decades has collectively demonstrated that the skeletal muscle performance can be alternatively assessed by mechanomyographic signal (MMG) parameters. Indices of muscle performance, not limited to force, power, work, endurance and the related physiological processes underlying muscle activities during contraction have been evaluated in the light of the signal features. As a non-stationary signal that reflects several distinctive patterns of muscle actions, the illustrations obtained from the literature support the reliability of MMG in the analysis of muscles under voluntary and stimulus evoked contractions. An appraisal of the standard practice including the measurement theories of the methods used to extract parameters of the signal is vital to the application of the signal during experimental and clinical practices, especially in areas where electromyograms are contraindicated or have limited application. As we highlight the underpinning technical guidelines and domains where each method is well-suited, the limitations of the methods are also presented to position the state of the art in MMG parameters extraction, thus providing the theoretical framework for improvement on the current practices to widen the opportunity for new insights and discoveries. Since the signal modality has not been widely deployed due partly to the limited information extractable from the signals when compared with other classical techniques used to assess muscle performance, this survey is particularly relevant to the projected future of MMG applications in the realm of musculoskeletal assessments and in the real time detection of muscle activity.

  10. Novel Local Calibration Method for Chemical Oxygen Demand Measurements by Using UV-Vis Spectrometry

    Science.gov (United States)

    Yingtian, Hu; Chao, Liu; Xiaoping, Wang

    2017-05-01

    In recent years, ultraviolet-visible spectroscopy has been widely used for chemical oxygen demand (COD) measurements of water. However, chemical compositions of substance in different water samples can cause measurement deviations, so a local calibration is needed. In this study, a novel local calibration method is proposed. The absorption spectra of COD standard solutions and wastewater samples taken from four factories were collected. We analyzed the impact of chemical compositions of substance in different water samples and extracted the morphology features of their absorptive spectra for recognition models. Furthermore, we calculated the local calibration parameters of the four categories of real water samples by specific modification based on the ability of light absorption in various water environments. After the process of local calibration, the root mean square errors (RMSEs) of the predictions were very small, which highlights the potential of this method for improving the accuracy and adaptability of COD measurements based on ultraviolet-visible spectrum.

  11. Evaluation of DNA extraction methods for freshwater eukaryotic microalgae.

    Science.gov (United States)

    Eland, Lucy E; Davenport, Russell; Mota, Cesar R

    2012-10-15

    The use of molecular methods to investigate microalgal communities of natural and engineered freshwater resources is in its infancy, with the majority of previous studies carried out by microscopy. Inefficient or differential DNA extraction of microalgal community members can lead to bias in downstream community analysis. Three commercially available DNA extraction kits have been tested on a range of pure culture freshwater algal species with diverse cell walls and mixed algal cultures taken from eutrophic waste stabilization ponds (WSP). DNA yield and quality were evaluated, along with DNA suitability for amplification of 18S rRNA gene fragments by polymerase chain reaction (PCR). QiagenDNeasy(®) Blood and Tissue kit (QBT), was found to give the highest DNA yields and quality. Denaturant Gradient Gel Electrophoresis (DGGE) was used to assess the diversity of communities from which DNA was extracted. No significant differences were found among kits when assessing diversity. QBT is recommended for use with WSP samples, a conclusion confirmed by further testing on communities from two tropical WSP systems. The fixation of microalgal samples with ethanol prior to DNA extraction was found to reduce yields as well as diversity and is not recommended.

  12. In vitro antimicrobial activity of auxiliary chemical substances and natural extracts on Candida albicans and Enterococcus faecalis in root canals

    Directory of Open Access Journals (Sweden)

    Marcia Carneiro Valera

    2013-04-01

    Full Text Available Objective: The aim of this study was to evaluate the antimicrobial activity of auxiliary chemical substances and natural extracts on Candida albicans and Enterococcus faecalis inoculated in root canals. Material and Methods: Seventy-two human tooth roots were contaminated with C. albicans and E. faecalis for 21 days. The groups were divided according to the auxiliary chemical substance into: G1 2.5% sodium hypochlorite (NaOCl, G2 2% chlorhexidine gel (CHX, G3 castor oil, G4 glycolic Aloe vera extract, G5 glycolic ginger extract, and G6 sterile saline (control. The samples of the root canal were collected at different intervals: confirmation collection, at 21 days after contamination; 1st collection, after instrumentation; and 2nd collection, seven days after instrumentation. Microbiological samples were grown in culture medium and incubated at 37°C for 48 hours. Results: The results were submitted to the Kruskal-Wallis and Dunn (5% statistical tests. NaOCl and CHX completely eliminated the microorganisms of the root canals. Castor oil and ginger significantly reduced the number of CFU of the tested bacteria. Reduction of CFU/mL at the 1st and 2nd collections for groups G1, G2, G3 and G4 was greater in comparison to groups G5 and G6. Conclusion: It was concluded that 2.5% sodium hypochlorite and 2% chlorhexidine gel were more effective in eliminating C. albicans and E. faecalis, followed by the castor oil and glycolic ginger extract. The Aloe vera extract showed no antimicrobial activity.

  13. Antimicrobial Activity and Chemical Constituents of the Extract from Jatropha curcas Fruit

    Directory of Open Access Journals (Sweden)

    Kanda Saosoong

    2016-05-01

    Full Text Available The antimicrobial activity and chemical constituents of the methanolic extract from J. curcas fruit were evaluated in this study. The crude extract was achieved by extraction with 60 % (v/v methanol. It showed the potencies of antimicrobial activity against P. putida, P. syringae pv. sesami, X. campestris, X. campestris pv. glycines, X. campestris pv. vesicatoria and R. solanacearum with the presence of inhibition zone in the range of 8.0 ± 0.0 to 13.7 ± 0.6 mm and MIC value at 214.29 ± 0.00 mg/mL. Furthermore, flavone compound can be proposed by the analysis of gas chromatography-mass spectrometry (GC-MS. According to the group of flavonoid compounds have strong bioactive properties; the results suggested that J. curcas fruit has highly potential as effective natural bioactive sources.

  14. Chemical composition of leaf extracts of Stevia rebaudiana Bertoni grown experimentally in Vojvodina

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    IVANA S. MARKOVIC

    2008-03-01

    Full Text Available The chemical composition of leaf extracts of Stevia rebaudiana Bertoni, grown for the first time on an experimental field near Zrenjanin, was examined by GC–MS. The tested plant material was harvested in September of 2002. To analyze the chemical composition of the lipophilic components of the plant leaves, essential oils and ethyl acetate extract were isolated. Qualitative analysis of the essential oil obtained by hydrodistillation showed that among the identified 88 compounds, the majority were mono- and sesquiterpenes (50 types identified. By analysing the ethyl acetate extract, the presence of fatty acids (present as free and as esters, n-alkanes, n-alkenes, cyclic alkanes, alcohols, aldehydes, ketones, etc. was ascertained. Sesquiterpenes prevailed among the terpenes (50 types identified. Further constituents identified in ethyl acetate extract included sterols. Nerol, b-cyclocitral, safranal, aromadendrene, a-amorphene and T-muurolol were identified for the first time in this species, with match values over 90 %. Taking into consideration that these terpenes were identified for the first time in this species, it is obvious that Stevia rebaudiana grown in this area possesses certain specific characteristics that can be ascribed to cultivation on a domestic plantation.

  15. [Remediation efficiency of lead-contaminated soil at an industrial site by ultrasonic-assisted chemical extraction].

    Science.gov (United States)

    Wang, Xin-jie; Huang, Jin-lou; Liu, Zhi-qiang; Yue, Xi

    2013-09-01

    This research chose five lead-contaminated sites of a lead-acid battery factory to analyze the speciation distribution and concentration of lead. Under the same conditions (0.1 mol x L(-1) EDTA,30 min, 25 degrees C), the removal effect of heavy metal was compared between ultrasonic-assisted chemical extraction (UCE) and conventional chemical extraction ( CCE), and the variation of lead speciation was further explored. The results showed that the lead removal efficiency of UCE was significantly better than CCE. The lead removal efficiency of WS, A, B, C and BZ was 10.06%, 48.29%, 48.69%, 53.28% and 36.26% under CCE. While the removal efficiency of the UCE was 22.42%, 69.31%, 71.00%, 74.49% and 71.58%, with the average efficiency higher by 22%. By comparing the speciation distribution of the two washing methods, it was found that the acid extractable content maintained or decreased after UCE, whereas it showed an increasing trend after CCE. The reduction effect of the reducible was as high as 98% by UCE. UCE also showed a more efficient reduction effect of the organic matter-sulfite bounded form and the residual form. Hence, it is feasible to improve the washing efficiency of heavy metal contained in soil by conducting the cleaning process with the help of ultrasonic wave, which is a simple and fast mean to remove lead from contaminated sites.

  16. Remediation of soils contaminated with particulate depleted uranium by multi stage chemical extraction

    Energy Technology Data Exchange (ETDEWEB)

    Crean, Daniel E. [Immobilisation Science Laboratory, Department of Materials Science and Engineering, The University of Sheffield (United Kingdom); Centre for Radiochemistry Research, School of Chemistry, The University of Manchester (United Kingdom); Livens, Francis R.; Sajih, Mustafa [Centre for Radiochemistry Research, School of Chemistry, The University of Manchester (United Kingdom); Stennett, Martin C. [Immobilisation Science Laboratory, Department of Materials Science and Engineering, The University of Sheffield (United Kingdom); Grolimund, Daniel; Borca, Camelia N. [Swiss Light Source, Paul Scherrer Institute, Villigen (Switzerland); Hyatt, Neil C., E-mail: n.c.hyatt@sheffield.ac.uk [Immobilisation Science Laboratory, Department of Materials Science and Engineering, The University of Sheffield (United Kingdom)

    2013-12-15

    Highlights: • Batch leaching was examined to remediate soils contaminated with munitions depleted uranium. • Site specific maximum extraction was 42–50% total U in single batch with NH{sub 4}HCO{sub 3}. • Analysis of residues revealed partial leaching and secondary carbonate phases. • Sequential batch leaching alternating between NH{sub 4}HCO{sub 3} and citric acid was designed. • Site specific extraction was increased to 68–87% total U in three batch steps. -- Abstract: Contamination of soils with depleted uranium (DU) from munitions firing occurs in conflict zones and at test firing sites. This study reports the development of a chemical extraction methodology for remediation of soils contaminated with particulate DU. Uranium phases in soils from two sites at a UK firing range, MOD Eskmeals, were characterised by electron microscopy and sequential extraction. Uranium rich particles with characteristic spherical morphologies were observed in soils, consistent with other instances of DU munitions contamination. Batch extraction efficiencies for aqueous ammonium bicarbonate (42–50% total DU extracted), citric acid (30–42% total DU) and sulphuric acid (13–19% total DU) were evaluated. Characterisation of residues from bicarbonate-treated soils by synchrotron microfocus X-ray diffraction and X-ray absorption spectroscopy revealed partially leached U(IV)-oxide particles and some secondary uranyl-carbonate phases. Based on these data, a multi-stage extraction scheme was developed utilising leaching in ammonium bicarbonate followed by citric acid to dissolve secondary carbonate species. Site specific U extraction was improved to 68–87% total U by the application of this methodology, potentially providing a route to efficient DU decontamination using low cost, environmentally compatible reagents.

  17. Supercritical CO2 extraction, chemical characterisation and antioxidant potential of Brassica oleracea var capitata against HO·, O2(·-) and ROO·.

    Science.gov (United States)

    Dal Prá, Valéria; Dolwitsch, Carolina Bolssoni; da Silveira, Géssica Domingos; Porte, Liliane; Frizzo, Clarissa; Tres, Marcus Vinicius; Mossi, Vinicius; Mazutti, Marcio Antonio; do Nascimento, Paulo Cícero; Bohrer, Denise; de Carvalho, Leandro Machado; Viana, Carine; da Rosa, Marcelo Barcellos

    2013-12-15

    In this work were extracted bioactive compounds from Brassica oleracea var capitata using supercritical CO2 and evaluated the antioxidant potential of the extracts. Five extractions were accomplished to investigate the influence of pressure (10-25 MPa) and temperature (20-60 °C) in the extraction yield, chemical composition and antioxidant potential towards peroxyl, superoxide and hydroxyl radicals. The highest extraction yield was obtained at 60 °C and 25 MPa, which was 0.47 wt% (run 2). In the characterisation of the extracts obtained was possible the identification of sulforaphane and iberin nitrile that present known biological properties. The extracts of all runs presented antioxidant activities towards the three radicals, but the highest activities for all radicals were using the extracts obtained in the run 2. The use of supercritical CO2 extraction to obtain bioactive compounds of B. oleracea var capitata showed to be a promising alternative to conventional extraction methods, since allowed the extraction of compounds with scientific and industrial interest. Copyright © 2013 Elsevier Ltd. All rights reserved.

  18. A hybrid method for pancreas extraction from CT image based on level set methods.

    Science.gov (United States)

    Jiang, Huiyan; Tan, Hanqing; Fujita, Hiroshi

    2013-01-01

    This paper proposes a novel semiautomatic method to extract the pancreas from abdominal CT images. Traditional level set and region growing methods that request locating initial contour near the final boundary of object have problem of leakage to nearby tissues of pancreas region. The proposed method consists of a customized fast-marching level set method which generates an optimal initial pancreas region to solve the problem that the level set method is sensitive to the initial contour location and a modified distance regularized level set method which extracts accurate pancreas. The novelty in our method is the proper selection and combination of level set methods, furthermore an energy-decrement algorithm and an energy-tune algorithm are proposed to reduce the negative impact of bonding force caused by connected tissue whose intensity is similar with pancreas. As a result, our method overcomes the shortages of oversegmentation at weak boundary and can accurately extract pancreas from CT images. The proposed method is compared to other five state-of-the-art medical image segmentation methods based on a CT image dataset which contains abdominal images from 10 patients. The evaluated results demonstrate that our method outperforms other methods by achieving higher accuracy and making less false segmentation in pancreas extraction.

  19. Chemical Decellularization Methods and Its Effects on Extracellular Matrix

    Directory of Open Access Journals (Sweden)

    Amir Hossein Akbari Zahmati

    2017-08-01

    Full Text Available Background:  Extracellular matrix (ECM produced by tissue decellularization processes as a biological scaffold due to its unique properties compared to other scaffolds for migration and implantation of stem cells have been used successfully in the field of tissue engineering and regenerative medicine in the last years. The objective of this manuscript was to provide an overview of the chemical decellularization methods, evaluation of decellularized ECM and the potential effect of the chemical decellularization agents on the biochemical composition. Methods: We searched in Google Scholar, PubMed, Scopus, and Science Direct. The literature search was done by using the following keywords: “ECM, biologic scaffold, decellularization, chemical methods, tissue engineering.” We selected articles have been published from 2000 to 2016, and 15 full texts and 97 abstracts were reviewed. Results:Employing an optimization method to minimize damage to the ECM ultrastructure as for a result of the lack of reduction in mechanical properties and also the preservation of essential proteins such as laminin, fibronectin, Glycosaminoglycans (GAGs, growth factor is required. Various methods include chemical, physical and enzymatic technics were studied. However, on each of these methods can have undesirable effects on ECM. Conclusion: It is suggested that instead of the Sodium dodecyl sulfate (SDS which have high strength degradation, we can use zwitterionic separately or in combination with SDS. Tributyl phosphate (TBP due to its unique properties can be used in decellularization process.

  20. Automatic segmentation of brain images: selection of region extraction methods

    Science.gov (United States)

    Gong, Leiguang; Kulikowski, Casimir A.; Mezrich, Reuben S.

    1991-07-01

    In automatically analyzing brain structures from a MR image, the choice of low level region extraction methods depends on the characteristics of both the target object and the surrounding anatomical structures in the image. The authors have experimented with local thresholding, global thresholding, and other techniques, using various types of MR images for extracting the major brian landmarks and different types of lesions. This paper describes specifically a local- binary thresholding method and a new global-multiple thresholding technique developed for MR image segmentation and analysis. The initial testing results on their segmentation performance are presented, followed by a comparative analysis of the two methods and their ability to extract different types of normal and abnormal brain structures -- the brain matter itself, tumors, regions of edema surrounding lesions, multiple sclerosis lesions, and the ventricles of the brain. The analysis and experimental results show that the global multiple thresholding techniques are more than adequate for extracting regions that correspond to the major brian structures, while local binary thresholding is helpful for more accurate delineation of small lesions such as those produced by MS, and for the precise refinement of lesion boundaries. The detection of other landmarks, such as the interhemispheric fissure, may require other techniques, such as line-fitting. These experiments have led to the formulation of a set of generic computer-based rules for selecting the appropriate segmentation packages for particular types of problems, based on which further development of an innovative knowledge- based, goal directed biomedical image analysis framework is being made. The system will carry out the selection automatically for a given specific analysis task.

  1. A new green chemistry method based on plant extracts to synthesize gold nanoparticles

    Science.gov (United States)

    Montes Castillo, Milka Odemariz

    Extraordinary chemical and physical properties exhibited by nanomaterials, as compared to their bulk counterparts, have made the area of nanotechnology a growing realm in the past three decades. It is the nanoscale size (from 1 to 100 nm) and the morphologies of nanomaterials that provide several properties and applications not possible for the same material in the bulk. Magnetic and optical properties, as well as surface reactivity are highly dependent on the size and morphology of the nanomaterial. Diverse nanomaterials are being widely used in molecular diagnostics as well as in medicine, electronic and optical devices. Among the most studied nanomaterials, gold nanoparticles are of special interest due to their multifunctional capabilities. For instance, spherical gold nanoparticles measuring 15-20 nm in diameter have been studied due to their insulin binding properties. Also, thiol functionalized gold nanoparticles between 5 and 30 nm are used in the detection of DNA. Thus, harnessing the shape and size of gold nanoparticles plays an important role in science and technology. The synthesis of gold nanoparticles via the reduction of gold salts, using citrate or other reducing agents, has been widely studied. In recent years, algae, fungi, bacteria, and living plants have been used to reduce trivalent gold (Au3+) to its zero oxidation state (Au 0) forming gold nanoparticles of different sizes and shapes. In addition, plant biomasses have also been studied for their gold-reducing power and nanoparticle formation. Although there is information about the synthesis of the gold nanoparticles by biologically based materials; to our knowledge, the study of the use of alfalfa extracts has not been reported. This innovation represents a significant improvement; that is an environmentally friendly method that does not use toxic chemicals. Also, the problem of extracting the formed gold nanoparticles from biomaterials is addressed in this research but still remains to be

  2. Displacement fields denoising and strains extraction by finite element method

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    Optical full-field measurement methods are now widely applied in various domains. In general,the displacement fields can be directly obtained from the measurement,however in mechanical analysis strain fields are preferred.To extract strain fields from noisy displacement fields is always a challenging topic.In this study,a finite element method for smoothing displacement fields and calculating strain fields is proposed.An experimental test case on a holed aluminum specimen under tension is applied to vali...

  3. Chemical Composition, Antibacterial and Antifungal Activities of Crude Dittrichia viscosa (L. Greuter Leaf Extracts

    Directory of Open Access Journals (Sweden)

    Wafa Rhimi

    2017-06-01

    Full Text Available The small amount of data regarding the antifungal activity of Dittrichia viscosa (L. Greuter against dermatophytes, Malassezia spp. and Aspergillus spp., associated with the few comparative studies on the antimicrobial activity of methanolic, ethanolic, and butanolic extracts underpins the study herein presented. The total condensed tannin (TCT, phenol (TPC, flavonoid (TFC, and caffeoylquinic acid (CQC content of methanol, butanol, and ethanol (80% and 100% extracts of D. viscosa were assessed and their bactericidal and fungicidal activities were evaluated. The antibacterial, anti-Candida and anti-Malassezia activities were evaluated by using the disk diffusion method, whereas the anti-Microsporum canis and anti-Aspergillus fumigatus activities were assessed by studying the toxicity effect of the extracts on vegetative growth, sporulation and germination. The methanolic extract contained the highest TPC and CQC content. It contains several phytochemicals mainly caffeoylquinic acid derivatives as determined by liquid chromatography with photodiode array and electrospray ionisation mass spectrometric detection (LC/PDA/ESI-MS analysis. All extracts showed an excellent inhibitory effect against bacteria and Candida spp., whereas methanolic extract exhibited the highest antifungal activities against Malassezia spp., M. canis and A. fumigatus strains. The results clearly showed that all extracts, in particular the methanolic extract, might be excellent antimicrobial drugs for treating infections that are life threatening (i.e., Malassezia or infections that require mandatory treatments (i.e., M. canis or A. fumigatus.

  4. Chemical composition and screening of the antimicrobial and antioxidative activity of extracts of Stachys species

    Directory of Open Access Journals (Sweden)

    JELENA S. LAZAREVIĆ

    2010-10-01

    Full Text Available GC and GC/MS analyses of the diethyl ether and ethyl acetate extracts obtained from the aerial parts of Stachys germanica subsp. heldreichii (Boiss Hayek, Stachys iva Griseb., Stachys plumosa Griseb. and Stachys scardica Griseb., Balkan peninsula endemics, were performed. One hundred and seventy-nine constituents, accounting for 88.8–98.1% of the total composition of the extracts, were identified. The common feature of the diethyl ether extracts was the high content of terpenoids and fatty acid-derived compounds, while the common feature of the ethyl acetate extracts was the prevalence of fatty acid-derived compounds. A disk diffusion method was used for the evaluation of the antimicrobial activities of the extracts against a panel of microorganisms (bacteria: Staphylococcus aureus, Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Salmonella enteritidis; fungi: Aspergillus niger and Candida albicans. The total antioxidant capacity of the extracts was evaluated by the phosphomolybdenum method. The preliminary bioassay results indicated that the diethyl ether extract of S. plumosa could be a possible source of antioxidant and antimicrobial compounds.

  5. Entropy Analysis as an Electroencephalogram Feature Extraction Method

    Directory of Open Access Journals (Sweden)

    P. I. Sotnikov

    2014-01-01

    Full Text Available The aim of this study was to evaluate a possibility for using an entropy analysis as an electroencephalogram (EEG feature extraction method in brain-computer interfaces (BCI. The first section of the article describes the proposed algorithm based on the characteristic features calculation using the Shannon entropy analysis. The second section discusses issues of the classifier development for the EEG records. We use a support vector machine (SVM as a classifier. The third section describes the test data. Further, we estimate an efficiency of the considered feature extraction method to compare it with a number of other methods. These methods include: evaluation of signal variance; estimation of spectral power density (PSD; estimation of autoregression model parameters; signal analysis using the continuous wavelet transform; construction of common spatial pattern (CSP filter. As a measure of efficiency we use the probability value of correctly recognized types of imagery movements. At the last stage we evaluate the impact of EEG signal preprocessing methods on the final classification accuracy. Finally, it concludes that the entropy analysis has good prospects in BCI applications.

  6. Portable Rule Extraction Method for Neural Network Decisions Reasoning

    Directory of Open Access Journals (Sweden)

    Darius PLIKYNAS

    2005-08-01

    Full Text Available Neural network (NN methods are sometimes useless in practical applications, because they are not properly tailored to the particular market's needs. We focus thereinafter specifically on financial market applications. NNs have not gained full acceptance here yet. One of the main reasons is the "Black Box" problem (lack of the NN decisions explanatory power. There are though some NN decisions rule extraction methods like decompositional, pedagogical or eclectic, but they suffer from low portability of the rule extraction technique across various neural net architectures, high level of granularity, algorithmic sophistication of the rule extraction technique etc. The authors propose to eliminate some known drawbacks using an innovative extension of the pedagogical approach. The idea is exposed by the use of a widespread MLP neural net (as a common tool in the financial problems' domain and SOM (input data space clusterization. The feedback of both nets' performance is related and targeted through the iteration cycle by achievement of the best matching between the decision space fragments and input data space clusters. Three sets of rules are generated algorithmically or by fuzzy membership functions. Empirical validation of the common financial benchmark problems is conducted with an appropriately prepared software solution.

  7. A rapid, non enzymatic method for genomic DNA extraction from whole blood and mammalian tissues

    Directory of Open Access Journals (Sweden)

    Adnan F. N Al-azawy

    2011-05-01

    Full Text Available Although several methods have been exist for DNA extraction from blood or animal tissues samples, traditionally most of these methods consume long time and using expensive chemicals such as proteinase K or toxic organic solvent such as phenol. On the other hand, there is no rapid, simple one method for the extraction of genomic DNA from blood and animal tissues samples in the same time. Since the objective of this study was to development easy modified method for DNA extraction from difference mammalian tissues such as fresh or frozen whole blood, kidney, liver, heart, muscles. The description method have many advantages, reducing the time, using inexpensive materials, no phenol, in addition to small amount of mammalian tissue is required (100-200 mg and 2 ml from whole blood. Genomic DNA was obtained having high molecular weight and good quality, shown by agarose gel electrophoresis and spectrophtometric analysis. These results shown that the modified method is simple, fast, safe, most economical, resulting in a high molecular genomic DNA of good quality from several mammalian tissues and can be used in medical laboratories and research centers.

  8. Detecting and extracting clusters in atom probe data: a simple, automated method using Voronoi cells.

    Science.gov (United States)

    Felfer, P; Ceguerra, A V; Ringer, S P; Cairney, J M

    2015-03-01

    The analysis of the formation of clusters in solid solutions is one of the most common uses of atom probe tomography. Here, we present a method where we use the Voronoi tessellation of the solute atoms and its geometric dual, the Delaunay triangulation to test for spatial/chemical randomness of the solid solution as well as extracting the clusters themselves. We show how the parameters necessary for cluster extraction can be determined automatically, i.e. without user interaction, making it an ideal tool for the screening of datasets and the pre-filtering of structures for other spatial analysis techniques. Since the Voronoi volumes are closely related to atomic concentrations, the parameters resulting from this analysis can also be used for other concentration based methods such as iso-surfaces. Copyright © 2014 Elsevier B.V. All rights reserved.

  9. A method to extract algae toxin of microcystin-LR

    Institute of Scientific and Technical Information of China (English)

    ZHANG Ming-ming; PAN Gang; YAN Hai; CHEN Hao

    2004-01-01

    A simple and Iow-cost method to obtain cyanobacterial toxin microcystin-LR(MC-LR) was developed. A new strain of Microcystis aeruginosa, named DC-1, producing microcystin-LR but not microcystin-RR, was separated from the field blooming algae samples of Dianchi Lake, in southwest of China. Following three times'freeze and thaw treatment, the cultivated DC-1 cells were extracted with 40% methanol in water. The extract was centrifuged and the supernatant applied to a Hydrophilic-Lipophilic Balance(HLB) SPE cartridge. Eluted impurities with a certain gradient from 30% to 50% methanol in water, MC-LR was finally eluted from the HLB cartridge with 60 % methanol in water, and samples containing 3.85 % to 14.8 % of MC-LR were obtained. These MC-LR samples may be used in adsorption and biodegradation experiments instead of using expensive standard reagents.

  10. Automatic extraction of candidate nomenclature terms using the doublet method

    Directory of Open Access Journals (Sweden)

    Berman Jules J

    2005-10-01

    Full Text Available Abstract Background New terminology continuously enters the biomedical literature. How can curators identify new terms that can be added to existing nomenclatures? The most direct method, and one that has served well, involves reading the current literature. The scholarly curator adds new terms as they are encountered. Present-day scholars are severely challenged by the enormous volume of biomedical literature. Curators of medical nomenclatures need computational assistance if they hope to keep their terminologies current. The purpose of this paper is to describe a method of rapidly extracting new, candidate terms from huge volumes of biomedical text. The resulting lists of terms can be quickly reviewed by curators and added to nomenclatures, if appropriate. The candidate term extractor uses a variation of the previously described doublet coding method. The algorithm, which operates on virtually any nomenclature, derives from the observation that most terms within a knowledge domain are composed entirely of word combinations found in other terms from the same knowledge domain. Terms can be expressed as sequences of overlapping word doublets that have more specific meaning than the individual words that compose the term. The algorithm parses through text, finding contiguous sequences of word doublets that are known to occur somewhere in the reference nomenclature. When a sequence of matching word doublets is encountered, it is compared with whole terms already included in the nomenclature. If the doublet sequence is not already in the nomenclature, it is extracted as a candidate new term. Candidate new terms can be reviewed by a curator to determine if they should be added to the nomenclature. An implementation of the algorithm is demonstrated, using a corpus of published abstracts obtained through the National Library of Medicine's PubMed query service and using "The developmental lineage classification and taxonomy of neoplasms" as a reference

  11. A new method for precursory information extraction: Slope-difference information method

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    A new method for precursory information extraction, i.e.,slope-difference information method is proposed in the paper for the daily-mean-value precursory data sequence. Taking Tangshan station as an example, the calculation of full-time-domain leveling data is made, which is tested and compared with several other methods. The results indicate that the method is very effective for extracting short-term precursory information from the daily mean values after the optimization is made. Therefore, it is valuable for popularization and application.

  12. Comparison antioxidant activity of Tarom Mahali rice bran extracted from different extraction methods and its effect on canola oil stabilization

    OpenAIRE

    2015-01-01

    In this study, Tarom Mahali rice bran extracts by ultrasound assisted and traditional solvent (ethanol and ethanol: water (50:50)) extraction method were compared. The total phenolic and tocopherol content and antioxidant activity of the extracts was determined and compared with TBHQ by DPPH assay and β-carotene bleaching method. The results show that the extract from ethanol: water (50:50) ultrasonic treatment with high amount of phenols (919.66 mg gallic acid/g extract, tocopherols (438.4 μ...

  13. Chemical Composition and Antioxidant/Antimicrobial Activities in Supercritical Carbon Dioxide Fluid Extract of Gloiopeltis tenax

    Directory of Open Access Journals (Sweden)

    Jiaojiao Zheng

    2012-11-01

    Full Text Available Gloiopeltis tenax (G. tenax is widely distributed along the Chinese coastal areas and is commonly used in the treatment of diarrhea and colitis. This study aimed at investigating the bioactivities of the volatile constituents in G. tenax. We extracted the essential constituents of G. tenax by supercritical carbon dioxide extraction (CO2-SFE, then identified and analyzed the constituents by gas chromatography-mass spectrometry (GC-MS. In total, 30 components were identified in the G. tenax extract. The components showed remarkable antioxidant activity (radical scavenging activity of 2,2-diphenyl-1-picrylhydrazyl (DPPH, lipid peroxidation inhibition capacity (in a β-carotene/linoleic acid-coupled oxidation reaction, and hydroxyl radical-scavenging activity (by deoxyribose degradation by iron-dependent hydroxyl radical, compared to butylated hydroxytoluene. In microdilution assays, G. tenax extracts showed a moderate inhibitory effects on Staphyloccocus aureus (minimum inhibitory concentration (MIC = 3.9 mg/mL, Enterococcus faecalis (7.8 mg/mL, Pseudomonas aeruginosa (15.6 mg/mL, and Escherichia coli (3.9 mg/mL. Antioxidant and antimicrobial activities of G. tenax were related to the active chemical composition. These results suggest that the CO2-SFE extract from G. tenax has potential to be used as a natural antioxidant and antimicrobial agent in food processing.

  14. Chemical constituents and anti-inflammatory activities of Maqian (Zanthoxylum myriacanthum var. pubescens) bark extracts.

    Science.gov (United States)

    Zhang, Huan-Li; Gan, Xiao-Qing; Fan, Qing-Fei; Yang, Jing-Jing; Zhang, Ping; Hu, Hua-Bin; Song, Qi-Shi

    2017-04-06

    In this study, 44 compounds in the petroleum ether extract of Maqian (Zanthoxylum myriacanthum var. pubescens) bark, a traditional Dai herbal medicine, were identified by GC-MS. Major components included 3(2H)-benzofuranone, asarinin and (dimethoxymethyl)-3-methoxy-benzene. A total of 18 compounds were isolated from the ethyl acetate extracts of Maqian bark by column chromatography and identified by chemical and spectral analyses. Rhoifoline B, zanthoxyline dimethoxy derivative, N-nortidine, nitidine, decarine are the major alkaloids. Both the petroleum ether and ethyl acetate extracts showed significant inhibition on NO production, which imply anti-inflammatory activity, in lipopolysaccharide-induced RAW 264.7 cells without cell toxicity. Decarine is the major anti-inflammatory constituent with NO IC50 values of 48.43 μM on RAW264.7 cells. The petroleum ether extract, the ethyl acetate extract and decarine showed anti-inflammatory activities through inhibiting TNF-α and IL-1β production in lipopolysaccharide-stimulated THP-1 cells without cell toxicity too. Decarine showed anti-inflammatory activity on human colon cells by reducing IL-6 and IL-8 production in TNF-α+IL-1β-induced Caco-2 cells. These results support the use of Maqian bark as a remedy for enteritis and colitis recorded by Dai medicine in China, and elucidate the major pharmacological compounds in Maqian bark.

  15. New learning subspace method for image feature extraction

    Institute of Scientific and Technical Information of China (English)

    CAO Jian-hai; LI Long; LU Chang-hou

    2006-01-01

    A new method of Windows Minimum/Maximum Module Learning Subspace Algorithm(WMMLSA) for image feature extraction is presented. The WMMLSM is insensitive to the order of the training samples and can regulate effectively the radical vectors of an image feature subspace through selecting the study samples for subspace iterative learning algorithm,so it can improve the robustness and generalization capacity of a pattern subspace and enhance the recognition rate of a classifier. At the same time,a pattern subspace is built by the PCA method. The classifier based on WMMLSM is successfully applied to recognize the pressed characters on the gray-scale images. The results indicate that the correct recognition rate on WMMLSM is higher than that on Average Learning Subspace Method,and that the training speed and the classification speed are both improved. The new method is more applicable and efficient.

  16. Chemical mutagenesis--a promising technique to increase metal concentration and extraction in sunflowers.

    Science.gov (United States)

    Nehnevajova, Erika; Herzig, Rolf; Federer, Guido; Erismann, Karl-Hans; Schwitzguébel, Jean-Paul

    2007-01-01

    Since most of the metal-hyperaccumulating wild plants only produce very low biomass and many high-yielding crops accumulate only moderate amounts of metals, the current research is mainly focused on overcoming these limitations and the optimization of metal phytoextraction. The main goal of the present study was the improvement of metal concentration and extraction properties of Helianthus annuus L by chemical mutagenesis (the non-GMO approach). Sunflowers--hybrid cultivar Salut and inbred lines-were treated with the chemical mutagen ethyl methanesulfonate (EMS). The effect of chemical mutagenesis on metal concentration in and extraction by new sunflower M1 and M2 mutants was directly assessed on a metal-contaminated field in Raft, Switzerland. Mutants of the M2 generation showed a 2-3 times higher metal shoot concentration than the control plants. The best M2 sunflower "giant mutant" 14/185/04 showed a significantly enhanced metal extraction ability: 7.5 times for Cd, 9.2 times for Zn, and 8.2 times for Pb in aboveground parts, as compared to the control plants. Theoretical calculations for the phytoextraction potential of new sunflower variants note that the best sunflower mutant can produce up to 26 t dry matter per hectare and remove 13.3 kg Zn per hectare and year at the sewage sludge contaminated site of Raft; that is a gain factor of 9 compared to Zn extraction by sunflower controls. Furthermore, the use of sunflower oil and biomass for technical purposes (lubricants, biodiesel, biogas) should produce an additional value and improve the economical balance of phytoextraction.

  17. How Laboratory Sampling Techniques and Extraction Methods Affect Reproducibility of PAH Results

    Science.gov (United States)

    2011-03-30

    Original Extraction Soxhlet US Army Corps of Engineers 4th Serial Extraction by Sonication US Army Corps of Engineers 654321 250000 200000 150000 100000...n z o ( a ) p y r e n e Scatterplot of Benzo (a) pyrene vs Extraction US Army Corps of Engineers Skeet Serial Extraction in mg/Kg Analyte...Army Corps of Engineers Field Sample Serial Extraction Analyte Sample A Sample B Benzo (a) pyrene 0.12% 0.03% Extraction Efficiency Extraction Method

  18. Chemical Composition and Antioxidant Activity of Essential Oils and Methanol Extracts of Different Parts from Juniperus rigida Siebold & Zucc.

    Science.gov (United States)

    Liu, Qiaoxiao; Li, Dengwu; Wang, Wei; Wang, Dongmei; Meng, Xiaxia; Wang, Yongtao

    2016-09-01

    The chemical composition and antioxidant activity of essential oils and MeOH extracts of stems, needles, and berries from Juniperus rigida were studied. The results indicated that the yield of essential oil from stems (2.5%) was higher than from needles (0.8%) and berries (1.0%). The gas chromatography/mass spectrometer (GC/MS) analysis indicated that 21, 17, and 14 compounds were identified from stems, needles, and berries essential oils, respectively. Caryophyllene, α-caryophyllene, and caryophyllene oxide were primary compounds in both stems and needles essential oils. However, α-pinene and β-myrcene mainly existed in berries essential oils and α-ionone only in needles essential oils. The high-performance liquid chromatography (HPLC) analysis indicated that the phenolic profiles of three parts exhibited significant differences. Needles extracts had the highest content of chlorogenic acid, catechin, podophyllotoxin, and amentoflavone, and for berries extracts, the content of those compounds was the lowest. Meanwhile, three in vitro methods (DPPH, ABTS, and FRAP) were used to evaluate antioxidant activity. Stems essential oil and needles extracts exhibited the powerful antioxidant activity than other parts. This is the first comprehensive study on the different parts of J. rigida. The results suggested that stems and needles of J. rigida are useful supplements for healthy products as new resources.

  19. Heat and Bleach: A Cost-Efficient Method for Extracting Microplastics from Return Activated Sludge.

    Science.gov (United States)

    Sujathan, Surya; Kniggendorf, Ann-Kathrin; Kumar, Arun; Roth, Bernhard; Rosenwinkel, Karl-Heinz; Nogueira, Regina

    2017-05-26

    The extraction of plastic microparticles, so-called microplastics, from sludge is a challenging task due to the complex, highly organic material often interspersed with other benign microparticles. The current procedures for microplastic extraction from sludge are time consuming and require expensive reagents for density separation as well as large volumes of oxidizing agents for organic removal, often resulting in tiny sample sizes and thus a disproportional risk of sample bias. In this work, we present an improved extraction method tested on return activated sludge (RAS). The treatment of 100 ml of RAS requires only 6% hydrogen peroxide (H2O2) for bleaching at 70 °C, followed by density separation with sodium nitrate/sodium thiosulfate (SNT) solution, and is completed within 24 h. Extracted particles of all sizes were chemically analyzed with confocal Raman microscopy. An extraction efficiency of 78 ± 8% for plastic particle sizes 20 µm and up was confirmed in a recovery experiment. However, glass shards with a diameter of less than 20 µm remained in the sample despite the density of glass exceeding the density of the separating SNT solution by 1.1 g/cm(3). This indicates that density separation may be unreliable for particle sizes in the lower micrometer range.

  20. Impact of traditional processing methods on some physico chemical ...

    African Journals Online (AJOL)

    AJB SERVER

    2006-10-16

    Oct 16, 2006 ... was then compared with flour sample prepared in the laboratory ... 'Fufu' samples from the modified method was significantly ... need to educate traditional processors on good manufacturing ... to dust, animals (e.g., lizard, sheep and goats), birds ... before being used for physical and chemical analyses.

  1. Selenium speciation methods and application to soil saturation extracts from San Joaquin Valley, California

    Science.gov (United States)

    Fio, John L.; Fujii, Roger

    1990-01-01

    Methods to determine soluble concentrations of selenite, selenate, and organic Se were evaluated on saturation extracts of soil samples collected from three sites on the Panoche Creek alluvial fan in the western San Joaquin Valley, California. The methods were used in combination with hydride-generation atomic-absorption spectrometry for detection of Se, and included a selective chemical-digestion method and three chromatographic methods using XAD-8 resin, Sep-Pak C18 cartridge, and a combination of XAD-8 resin and activated charcoal. The chromatography methods isolate dissolved organic matter that can inhibit Se detection by hydride-generation atomic-absorption spectrometry. Isolation of hydrophobic organic matter with XAD-8 did not affect concentrations of selenite and selenate, and the isolated organic matter represents a minimal estimation of organic Se. Ninety-eight percent of the Se in the extracts was selenate and about 100% of the isolated organic Se was associated with the humic acid fraction of dissolved organic matter. The depth distribution of Se species in the soil saturation extracts support a hypothesis that the distribution of soluble Se and salinity in these soils is the result of evaporation from a shallow water table and leaching by irrigation water low in Se and salinity.

  2. Comparative Analysis of the Bufonis Venenum by Using TLC, HPLC, and LC-MS for Different Extraction Methods

    Directory of Open Access Journals (Sweden)

    Lee Hyo-Jae

    2012-12-01

    Full Text Available Objectives: Toad venom, called Chan-Su, is a traditional Oriental medicine secreted from the auricular and the skin glands of the Bufo bufo gargarizanz Cantor or B. melanosticus Schneider and has been widely used in China, Korea and other parts of Asia for the treatment of pain, heart conditions, and cancer. We examined the concentrations of the main chemical constituents within a commerciallyavailable toad venom product and compared the levels for different extraction methods. Methods: Toad venom was extracted using either cold or hot water, ethanol (EtOH, methanol (MeOH, or ethyl acetate (EtOAc, was fractionated using precipitation or reflux, and was then analyzed using thin layer chromatography (TLC, high-performance liquid chromatography (HTLC, and liquid chroma-tography - mass spectrometry (LC-MS. Individual components were identified by comparisons of the retention times, the ultraviolet spectra, and mass spectras and differences in chemical constituents for different solvents and extraction methods are presented. Results:Components with authentic standards, including serotonin and bufodienolides (cinobufagen, bufalin, cinobufalin, and resibufogenin, were detected. The water extract of toad venom contained the greatest amount of serotonin (75.7 ± 0.1 mg/g, but very small amounts of bufodienolides (3.8 ± 0.0 mg/g. In contrast, the use of MeOH or EtOH extraction solutions resulted in 5-26 times higher concentrations of bufodienolides, with only trace amounts of serotonin. The relative and the absolute concentrations of the component also varied based on the extraction method; i.e., EtOH extracts yielded the greatest total amounts of bufodienolides, and EtOAc precipitation had the lowest amounts of bufodienolides. Conclusions: Toad venom consists of serotonin and several bufodienolides, and the choice of solvent to extract chemical the constituents is important as a way to enrich the purported active components for treating different

  3. Soil chemical sensor and precision agricultural chemical delivery system and method

    Energy Technology Data Exchange (ETDEWEB)

    Colburn, J.W. Jr.

    1991-07-23

    A real time soil chemical sensor and precision agricultural chemical delivery system includes a plurality of ground-engaging tools in association with individual soil sensors which measure soil chemical levels. The system includes the addition of a solvent which rapidly saturates the soil/tool interface to form a conductive solution of chemicals leached from the soil. A multivalent electrode, positioned within a multivalent frame of the ground-engaging tool, applies a voltage or impresses a current between the electrode and the tool frame. A real-time soil chemical sensor and controller senses the electrochemical reaction resulting from the application of the voltage or current to the leachate, measures it by resistivity methods, and compares it against pre-set resistivity levels for substances leached by the solvent. Still greater precision is obtained by calibrating for the secondary current impressed through solvent-less soil. The appropriate concentration is then found and the servo-controlled delivery system applies the appropriate amount of fertilizer or agricultural chemicals substantially in the location from which the soil measurement was taken. 5 figures.

  4. Studies of Trace Gas Chemical Cycles Using Observations, Inverse Methods and Global Chemical Transport Models

    Science.gov (United States)

    Prinn, Ronald G.

    2001-01-01

    For interpreting observational data, and in particular for use in inverse methods, accurate and realistic chemical transport models are essential. Toward this end we have, in recent years, helped develop and utilize a number of three-dimensional models including the Model for Atmospheric Transport and Chemistry (MATCH).

  5. Extraction, Chemical Composition, and Antifungal Activity of Essential Oil of Bitter Almond.

    Science.gov (United States)

    Geng, Huiling; Yu, Xinchi; Lu, Ailin; Cao, Haoqiang; Zhou, Bohang; Zhou, Le; Zhao, Zhong

    2016-08-29

    The essential oil from the powder residual of dried bitter almond, a novel and environmentally-friendly fungicide, was successfully extracted in a 0.7% yield by hydro-distillation under optimized conditions. The chemical composition of bitter almond essential oil (BAEO) was analyzed by gas chromatography-mass spectrometry (GC-MS). Twenty-one different components representing 99.90% of the total essential oil were identified, of which benzaldehyde (62.52%), benzoic acid (14.80%), and hexadecane (3.97%) were the most abundant components. Furthermore, the in vitro and in vivo antifungal activities of BAEO against common plant pathogenic fungi were evaluated by the mycelium linear growth rate method and pot test, respectively. It was documented that 1 mg/mL of BAEO could variously inhibit all tested pathogenic fungi with the inhibition rates of 44.8%~100%. Among the tested 19 strains of fungi, the median effective concentration (EC50) values of BAEO against Alternaria brassicae and Alternaria solani were only 50.2 and 103.2 μg/mL, respectively, which were higher than those of other fungi. The in vivo antifungal activity of BAEO against Gloeosporium orbiculare was much higher than Blumeria graminis. The protective efficacy for the former was up to 98.07% at 10 mg/mL and the treatment efficacy was 93.41% at 12 mg/mL. The above results indicated that BAEO has the great potential to be developed as a botanical and agricultural fungicide.

  6. Extraction, Chemical Composition, and Antifungal Activity of Essential Oil of Bitter Almond

    Science.gov (United States)

    Geng, Huiling; Yu, Xinchi; Lu, Ailin; Cao, Haoqiang; Zhou, Bohang; Zhou, Le; Zhao, Zhong

    2016-01-01

    The essential oil from the powder residual of dried bitter almond, a novel and environmentally-friendly fungicide, was successfully extracted in a 0.7% yield by hydro-distillation under optimized conditions. The chemical composition of bitter almond essential oil (BAEO) was analyzed by gas chromatography–mass spectrometry (GC–MS). Twenty-one different components representing 99.90% of the total essential oil were identified, of which benzaldehyde (62.52%), benzoic acid (14.80%), and hexadecane (3.97%) were the most abundant components. Furthermore, the in vitro and in vivo antifungal activities of BAEO against common plant pathogenic fungi were evaluated by the mycelium linear growth rate method and pot test, respectively. It was documented that 1 mg/mL of BAEO could variously inhibit all tested pathogenic fungi with the inhibition rates of 44.8%~100%. Among the tested 19 strains of fungi, the median effective concentration (EC50) values of BAEO against Alternaria brassicae and Alternaria solani were only 50.2 and 103.2 μg/mL, respectively, which were higher than those of other fungi. The in vivo antifungal activity of BAEO against Gloeosporium orbiculare was much higher than Blumeria graminis. The protective efficacy for the former was up to 98.07% at 10 mg/mL and the treatment efficacy was 93.41% at 12 mg/mL. The above results indicated that BAEO has the great potential to be developed as a botanical and agricultural fungicide. PMID:27589723

  7. Extraction, Chemical Composition, and Antifungal Activity of Essential Oil of Bitter Almond

    Directory of Open Access Journals (Sweden)

    Huiling Geng

    2016-08-01

    Full Text Available The essential oil from the powder residual of dried bitter almond, a novel and environmentally-friendly fungicide, was successfully extracted in a 0.7% yield by hydro-distillation under optimized conditions. The chemical composition of bitter almond essential oil (BAEO was analyzed by gas chromatography–mass spectrometry (GC–MS. Twenty-one different components representing 99.90% of the total essential oil were identified, of which benzaldehyde (62.52%, benzoic acid (14.80%, and hexadecane (3.97% were the most abundant components. Furthermore, the in vitro and in vivo antifungal activities of BAEO against common plant pathogenic fungi were evaluated by the mycelium linear growth rate method and pot test, respectively. It was documented that 1 mg/mL of BAEO could variously inhibit all tested pathogenic fungi with the inhibition rates of 44.8%~100%. Among the tested 19 strains of fungi, the median effective concentration (EC50 values of BAEO against Alternaria brassicae and Alternaria solani were only 50.2 and 103.2 μg/mL, respectively, which were higher than those of other fungi. The in vivo antifungal activity of BAEO against Gloeosporium orbiculare was much higher than Blumeria graminis. The protective efficacy for the former was up to 98.07% at 10 mg/mL and the treatment efficacy was 93.41% at 12 mg/mL. The above results indicated that BAEO has the great potential to be developed as a botanical and agricultural fungicide.

  8. Evaluation of Antioxidant Activities of Some Small Fruits Containing Anthocyanins Using Electrochemical and Chemical Methods

    Directory of Open Access Journals (Sweden)

    Adina Căta

    2016-06-01

    Full Text Available The objective of this work was to estimate the antioxidant capacity of some fruits extracts containing anthocyanins (strawberry, raspberry, elderberry, mulberry, blackberry, bilberry, black and red currant using an electrochemical technique and three classical chemical methods based on reaction between antioxidants and a chromogen compound. evaluation of antioxidant activities of extracts was performed by using FRAP (ferric reducing/antioxidant capacity, ABTS (2,2’-azinobis[3-ethylbenzothiazoline-6-sulphonate] and DPPH (2,2-diphenyl-1-picrylhydrazyl assays. Antioxidant activities of the extracts were correlated with their content of monomeric anthocyanins and total phenolics. Good correlations were obtained especially between antioxidant activities and total phenolics content. Cyclic voltammetry was used for the evaluation of overall reducing capacity of the extracts using a glassy carbon electrode. Reducing capacity of selected fruits extracts was assessed based on the half-peak potential (E1/2 of the first oxidation peak. The oxidation potentials characterized by E1/2 value were not correlated with the antioxidant activities evaluated by the classical methods. This work is licensed under a Creative Commons Attribution 4.0 International License.

  9. Chloroform extraction of iodine in seawater: method development

    Science.gov (United States)

    Seidler, H. B.; Glimme, A.; Tumey, S.; Guilderson, T. P.

    2012-12-01

    While 129I poses little to no radiological health hazard, the isotopic ratio of 129I to stable iodine is very useful as a nearly conservative tracer for ocean mixing processes. The unfortunate disaster at the Fukushima Daiichi nuclear power plant released many radioactive materials into the environment, including 129I. The release allows the studying of oceanic processes through the tracking of 129I. However, with such a low iodine (~0.5 micromolar) and 129I concentrations (research and worked towards maximum efficiency of the process while boosting the recovery of iodine. During development, we assessed each methodological change qualitatively using a color scale (I2 in CHCl3) and quantitatively using Inductively Coupled Plasma Mass Spectrometry (ICP-MS). The "optimized method" yielded a 20-40% increase in recovery of the iodine compared to the base method (80-85% recovery vs. 60%). Lastly, the "optimized method" was tested by AMS for fractionation of the extracted iodine.

  10. A method of ECG template extraction for biometrics applications.

    Science.gov (United States)

    Zhou, Xiang; Lu, Yang; Chen, Meng; Bao, Shu-Di; Miao, Fen

    2014-01-01

    ECG has attracted widespread attention as one of the most important non-invasive physiological signals in healthcare-system related biometrics for its characteristics like ease-of-monitoring, individual uniqueness as well as important clinical value. This study proposes a method of dynamic threshold setting to extract the most stable ECG waveform as the template for the consequent ECG identification process. With the proposed method, the accuracy of ECG biometrics using the dynamic time wraping for difference measures has been significantly improved. Analysis results with the self-built electrocardiogram database show that the deployment of the proposed method was able to reduce the half total error rate of the ECG biometric system from 3.35% to 1.45%. Its average running time on the platform of android mobile terminal was around 0.06 seconds, and thus demonstrates acceptable real-time performance.

  11. Effects of Feature Extraction and Classification Methods on Cyberbully Detection

    Directory of Open Access Journals (Sweden)

    Esra SARAÇ

    2016-12-01

    Full Text Available Cyberbullying is defined as an aggressive, intentional action against a defenseless person by using the Internet, or other electronic contents. Researchers have found that many of the bullying cases have tragically ended in suicides; hence automatic detection of cyberbullying has become important. In this study we show the effects of feature extraction, feature selection, and classification methods that are used, on the performance of automatic detection of cyberbullying. To perform the experiments FormSpring.me dataset is used and the effects of preprocessing methods; several classifiers like C4.5, Naïve Bayes, kNN, and SVM; and information gain and chi square feature selection methods are investigated. Experimental results indicate that the best classification results are obtained when alphabetic tokenization, no stemming, and no stopwords removal are applied. Using feature selection also improves cyberbully detection performance. When classifiers are compared, C4.5 performs the best for the used dataset.

  12. Optimized protein extraction methods for proteomic analysis of Rhizoctonia solani.

    Science.gov (United States)

    Lakshman, Dilip K; Natarajan, Savithiry S; Lakshman, Sukla; Garrett, Wesley M; Dhar, Arun K

    2008-01-01

    Rhizoctonia solani (Teleomorph: Thanatephorus cucumeris, T. praticola) is a basidiomycetous fungus and a major cause of root diseases of economically important plants. Various isolates of this fungus are also beneficially associated with orchids, may serve as biocontrol agents or remain as saprophytes with roles in decaying and recycling of soil organic matter. R. solani displays several hyphal anastomosis groups (AG) with distinct host and pathogenic specializations. Even though there are reports on the physiological and histological basis of Rhizoctonia-host interactions, very little is known about the molecular biology and control of gene expression early during infection by this pathogen. Proteamic technologies are powerful tools for examining alterations in protein profiles. To aid studies on its biology and host pathogen interactions, a two-dimensional (2-D) gel-based global proteomic study has been initiated. To develop an optimized protein extraction protocol for R. solani, we compared two previously reported protein extraction protocols for 2-D gel analysis of R. solani (AG-4) isolate Rs23. Both TCA-acetone precipitation and phosphate solubilization before TCA-acetone precipitation worked well for R. solani protein extraction, although selective enrichment of some proteins was noted with either method. About 450 spots could be detected with the densitiometric tracing of Coomassie blue-stained 2-D PAGE gels covering pH 4-7 and 6.5-205 kDa. Selected protein spots were subjected to mass spectrometric analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS). Eleven protein spots were positively identified based on peptide mass fingerprinting match with fungal proteins in public databases with the Mascot search engine. These results testify to the suitability of the two optimized protein extraction protocols for 2-D proteomic studies of R. solani.

  13. IMPACTS OF TEMPERATURE AND SELECTED CHEMICAL DIGESTION METHODS ON MICROPLASTIC PARTICLES.

    Science.gov (United States)

    Munno, Keenan; Helm, Paul A; Jackson, Donald A; Rochman, Chelsea; Sims, Alina

    2017-08-07

    Alkaline and wet peroxide oxidation (WPO) chemical digestion techniques used to extract microplastics from organic matrices were assessed for recoveries and for impacts on ability to identify polymer types. Methods using WPO generated enough heat to result in the complete loss of some types of microplastic particles, and boiling tests confirmed that temperatures >70 °C were responsible for the losses. Fourier transform infrared spectroscopy (FTIR) confirmed minimal alteration of the recovered polymers by the applied methods. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

  14. Chemical Modification Methods of Nanoparticles of Silicon Carbide Surface

    Directory of Open Access Journals (Sweden)

    Anton S. Yegorov

    2015-09-01

    Full Text Available silicon carbide exhibits exceptional properties: high durability, high thermal conductivity, good heat resistance, low thermal expansion factor and chemical inactivity. Reinforcement with silicon carbide nanoparticles increases polymer’s tensile strength and thermal stability.Chemical methods of modification of the silicon carbide surface by means of variety of reagents from ordinary molecules to macromolecular polymers are reviewed in the review.The structure of silicon carbide surface layer and the nature of modificator bonding with the surface of SiC particles are reviewed. General examples of surface modification methodologies and composite materials with the addition of modified SiC are given.

  15. Methods and tools for sustainable chemical process design

    DEFF Research Database (Denmark)

    Loureiro da Costa Lira Gargalo, Carina; Chairakwongsa, Siwanat; Quaglia, Alberto;

    2015-01-01

    As the pressure on chemical and biochemical processes to achieve a more sustainable performance increases, the need to define a systematic and holistic way to accomplish this is becoming more urgent. In this chapter, a multilevel computer-aided framework for systematic design of more sustainable...... chemical processes is presented. The framework allows the use of appropriate computer-aided methods and tools in a hierarchical manner according to a developed work flow for a multilevel criteria analysis that helps generate competing and more sustainable process design options. The application...

  16. Method of extracting heat from dry geothermal reservoirs

    Science.gov (United States)

    Potter, R.M.; Robinson, E.S.; Smith, M.C.

    1974-01-22

    Hydraulic fracturing is used to interconnect two or more holes that penetrate a previously dry geothermal reservoir, and to produce within the reservoir a sufficiently large heat-transfer surface so that heat can be extracted from the reservoir at a usefully high rate by a fluid entering it through one hole and leaving it through another. Introduction of a fluid into the reservoir to remove heat from it and establishment of natural (unpumped) convective circulation through the reservoir to accomplish continuous heat removal are important and novel features of the method. (auth)

  17. Comparison of methods for proanthocyanidin extraction from pine (Pinus densiflora) needles and biological activities of the extracts.

    Science.gov (United States)

    Kim, Nam-Young; Jang, Min-Kyung; Lee, Dong-Geun; Yu, Ki Hwan; Jang, Hyeji; Kim, Mihyang; Kim, Sung Gu; Yoo, Byung Hong; Lee, Sang-Hyeon

    2010-02-01

    Flavonoids are known to be effective scavengers of free radicals. In particular, proanthocyanidins are flavonoids that possess cardiovascular protection, antioxidative activities, and immunomodulatory activities. Here, we evaluated proanthocyanidin contents in the total polyphenolic compounds of pine needle extracts prepared by hot water, ethanol, hexane, hot water-hexane (HWH), and hot water-ethanol (HWE). Analysis of each extract indicated that the ethanol extract contained the highest proanthocyanidin concentration. The HWH and hexane extracts also contained relatively high concentrations of proanthocyanidin. On the other hand, proanthocyanidin content analyses out of the total polyphenolic compounds indicated that the HWH extract contained the highest content. These results suggest that HWH extraction is a suitable method to obtain an extract with a high level of pure proanthocyanidins and a relatively high yield. The HWH extract possessed superior activity in diverse antioxidative analyses such as 2,2-diphenyl-1-picrylhydrazyl (DPPH), ferrous ion chelating (FIC), and ferric-ion reducing power (FRAP) assays. In addition, upon assessing the effects of the pine needle extracts on macrophages (Raw 264.7 cell), the HWH extract exhibited the highest activity. In this study, we discerned an efficient extraction method to achieve relatively pure proanthocyanidins from pine needles and evaluated the biological functions of the resulting extract, which could potentially be used for its efficacious components in functional food products.

  18. Simplified recovery process of Ralstonia solanacearum-synthesized polyhydroxyalkanoates via chemical extraction complemented by liquid-liquid phase separation

    Directory of Open Access Journals (Sweden)

    Karine L. Macagnan

    Full Text Available Poly (3-hydroxybutyrate (P(3HB is the most studied thermoplastic biopolymer belonging to the polyhydroxyalkanoate (PHA family, the main features of which include rapid biodegradability and biocompatibility. The bioplastic recovery process is an important step during production and can directly influence the characteristics of PHAs. However, more efficient methods for the production of P(3HB are necessary to make it economically viable. The aim of the present study was to improve the standard, chloroform-based, extraction step for the recovery of P(3HB. The polymer was produced using a Ralstonia solanacearum strain. The following parameters were improved in the recovery process: heating time, separation method (filtration or liquid-liquid phase separation, biomass state (fresh or dry cell concentrate and the solvent:biomass ratio. By improving the chemical extraction of P(3HB we recovered 98% of the cumulative polymer and reduced the heating time by 75%. Furthermore, we improved the separation process and developed an extraction solution that was faster and more economical.

  19. Evaluation of the effect of extraction solvent and organ selection on the chemical profile of Astragalus spinosus using HPTLC- multivariate image analysis.

    Science.gov (United States)

    Shawky, Eman; Selim, Dina A

    2017-09-01

    The evaluation of extraction protocols for untargeted and targeted metabolomics was implemented for root and aerial organs of Astragalus spinosus in this work. The efficiency and complementarity of commonly used extraction solvents, namely petroleum ether, methylene chloride, ethyl acetate and n-butanol were considered for method evaluation using chemometric techniques in conjunction with new, simple, and fast high performance thin layer chromatography (HPTLC) method for fingerprint analysis by extracting information from a digitalized HPTLC plate using ImageJ software. A targeted approach was furtherly implemented by developing and validating an HPTLC method allowing the quantification of three saponin glycosides. The results of untargeted and targeted principle component analysis (PCA) and hierarchical cluster analysis (HCA) revealed that the apparent saponins profile seems to depend on a combined effect of matrix composition and the properties of the selected solvent for extraction, where both the biological matrix of the investigated plant organs, as well as the extraction solvent can influence the precision of metabolite abundances. Although, the aerial part is frequently discarded as waste, it is shown hereby that it has similar chemical profile compared to the medicinal part, roots, yet a different extraction solvents pattern is recognized between the two organs which can be attributed to the differences in the composition, permeability or accessibility of the sample matrix/organ tissues, rather than the chemical structures of the detected metabolites. Copyright © 2017 Elsevier B.V. All rights reserved.

  20. Extraction of β-glucan from Saccharomyces cerevisiae: Comparison of different extraction methods and in vivo assessment of immunomodulatory effect in mice

    Directory of Open Access Journals (Sweden)

    Noppawat PENGKUMSRI

    2016-01-01

    Full Text Available Abstract Beta-glucan (BG is a conserved cell wall components of bacteria, fungi, and yeast. BG is an immunomodulator and stimulates the host immune system. This study was performed to screen Saccharomyces cerevisiae strain with high BG, extraction of BG using different chemical extraction methods, composition analysis of BG, and evaluation of the immunomodulatory effect of high-quality BG using mice model. Ten yeast strains were screened for high BG content using total glucan extraction kit and were subjected to FT-IR analysis. The kit based extraction revealed that HII31 showed a high content of total glucan and BG. HII31 cells were subjected to four different acid/base extractions, which indicated that combination of a strong base (NaOH and weak acid (CH3COOH extraction recovered high BG and a high ratio of polysaccharide, protein, and lipid. Further, the immunomodulatory effect of the selected BG was evaluated using mice, which suggested that low dose of HII31-BG induces the expression of selected pro-inflammatory (IL-17, IFN-γ and anti-inflammatory cytokine (IL-10 significantly, whereas relatively high dose was required to alter the IL-6 and TGF-β expression. Overall, the present study revealed that BG extracted from HII31 cells alters the expression of studied cytokines, which can be used as a potent immunomodulator in pharmaceutical products.

  1. Different extraction methods of biologically active components from propolis: a preliminary study

    Directory of Open Access Journals (Sweden)

    Bankova Vassya

    2007-06-01

    Full Text Available Abstract Background Propolis is widely used in apitherapy, preparations, and food and beverage additives. Various extraction techniques were applied in the extraction of the biologically active constituents of poplar type propolis in order to compare their efficiency. The methods employed were: traditional maceration extraction, ultrasound extraction (UE, and microwave assisted extraction (MAE. Results The total amounts of extracted phenolics and flavonoids were determined, and the effectiveness of the methods compared. MAE was very rapid but led to the extraction of a large amount of non-phenolic and non-flavonoid material. UE gave the highest percentage of extracted phenolics. Conclusion Compared to the maceration extraction, MAE and UE methods provided high extraction yield, requiring short timeframes and less labour. UE was shown to be the most efficient method based on yield, extraction time and selectivity.

  2. Method Specific Calibration Corrects for DNA Extraction Method Effects on Relative Telomere Length Measurements by Quantitative PCR

    Science.gov (United States)

    Holland, Rebecca; Underwood, Sarah; Fairlie, Jennifer; Psifidi, Androniki; Ilska, Joanna J.; Bagnall, Ainsley; Whitelaw, Bruce; Coffey, Mike; Banos, Georgios; Nussey, Daniel H.

    2016-01-01

    Telomere length (TL) is increasingly being used as a biomarker in epidemiological, biomedical and ecological studies. A wide range of DNA extraction techniques have been used in telomere experiments and recent quantitative PCR (qPCR) based studies suggest that the choice of DNA extraction method may influence average relative TL (RTL) measurements. Such extraction method effects may limit the use of historically collected DNA samples extracted with different methods. However, if extraction method effects are systematic an extraction method specific (MS) calibrator might be able to correct for them, because systematic effects would influence the calibrator sample in the same way as all other samples. In the present study we tested whether leukocyte RTL in blood samples from Holstein Friesian cattle and Soay sheep measured by qPCR was influenced by DNA extraction method and whether MS calibration could account for any observed differences. We compared two silica membrane-based DNA extraction kits and a salting out method. All extraction methods were optimized to yield enough high quality DNA for TL measurement. In both species we found that silica membrane-based DNA extraction methods produced shorter RTL measurements than the non-membrane-based method when calibrated against an identical calibrator. However, these differences were not statistically detectable when a MS calibrator was used to calculate RTL. This approach produced RTL measurements that were highly correlated across extraction methods (r > 0.76) and had coefficients of variation lower than 10% across plates of identical samples extracted by different methods. Our results are consistent with previous findings that popular membrane-based DNA extraction methods may lead to shorter RTL measurements than non-membrane-based methods. However, we also demonstrate that these differences can be accounted for by using an extraction method-specific calibrator, offering researchers a simple means of accounting for

  3. Method Specific Calibration Corrects for DNA Extraction Method Effects on Relative Telomere Length Measurements by Quantitative PCR.

    Science.gov (United States)

    Seeker, Luise A; Holland, Rebecca; Underwood, Sarah; Fairlie, Jennifer; Psifidi, Androniki; Ilska, Joanna J; Bagnall, Ainsley; Whitelaw, Bruce; Coffey, Mike; Banos, Georgios; Nussey, Daniel H

    2016-01-01

    Telomere length (TL) is increasingly being used as a biomarker in epidemiological, biomedical and ecological studies. A wide range of DNA extraction techniques have been used in telomere experiments and recent quantitative PCR (qPCR) based studies suggest that the choice of DNA extraction method may influence average relative TL (RTL) measurements. Such extraction method effects may limit the use of historically collected DNA samples extracted with different methods. However, if extraction method effects are systematic an extraction method specific (MS) calibrator might be able to correct for them, because systematic effects would influence the calibrator sample in the same way as all other samples. In the present study we tested whether leukocyte RTL in blood samples from Holstein Friesian cattle and Soay sheep measured by qPCR was influenced by DNA extraction method and whether MS calibration could account for any observed differences. We compared two silica membrane-based DNA extraction kits and a salting out method. All extraction methods were optimized to yield enough high quality DNA for TL measurement. In both species we found that silica membrane-based DNA extraction methods produced shorter RTL measurements than the non-membrane-based method when calibrated against an identical calibrator. However, these differences were not statistically detectable when a MS calibrator was used to calculate RTL. This approach produced RTL measurements that were highly correlated across extraction methods (r > 0.76) and had coefficients of variation lower than 10% across plates of identical samples extracted by different methods. Our results are consistent with previous findings that popular membrane-based DNA extraction methods may lead to shorter RTL measurements than non-membrane-based methods. However, we also demonstrate that these differences can be accounted for by using an extraction method-specific calibrator, offering researchers a simple means of accounting for

  4. Chemical Constituents of the Methanolic Extract of Leaves of Leiothrix spiralis Ruhland and Their Antimicrobial Activity

    Directory of Open Access Journals (Sweden)

    Lourdes Campaner dos Santos

    2011-12-01

    Full Text Available Chemical fractionation of the methanolic extract of leaves of Leiothrix spiralis Ruhland afforded the flavonoids luteolin-6-C-b-D-glucopyranoside (1, 7-methoxyluteolin-6-C-b-D-glucopyranoside (2, 7-methoxyluteolin-8-C-b-D-glucopyranoside (3, 4′-methoxyluteolin-6-C-b-D-glucopyranoside (4, and 6-hydroxy-7-methoxyluteolin (5, and the xanthones 8-carboxymethyl-1,5,6-trihydroxy-3-methoxyxanthone (6, 8-carboxy-methyl-1,3,5,6-tetrahydroxyxanthone (7. Methanolic extract, fractions, and isolated compounds of the leaves of L. spiralis were assayed against Gram-positive (Staphylococcus aureus, Bacillus subtilis and Enterococcus faecalis and Gram-negative bacteria (Escherichia coli, Pseudomonas aeruginosa, Salmonella setubal and Helicobacter pylori and fungi (the yeasts Candida albicans, C. tropicalis, C. krusei and C. parapsilosis. We observed the best minimum inhibitory concentration values for the methanolic extract against Candida parapsilosis, for the fraction 5 + 6 against Gram-negative bacteria E. coli and P. aeruginosa, and compound 7 against all tested Candida strains. The methanolic extract contents suggest that this species may be a promising source of compounds to produce natural phytomedicines.

  5. Quality and characteristics of ginseng seed oil treated using different extraction methods

    OpenAIRE

    Lee, Myung-Hee; Kim, Sung-Soo; Cho, Chang-Won; Choi, Sang-Yoon; In, Gyo; Kim, Kyung-Tack

    2013-01-01

    Ginseng seed oil was prepared using compressed, solvent, and supercritical fluid extraction methods of ginseng seeds, and the extraction yield, color, phenolic compounds, fatty acid contents, and phytosterol contents of the ginseng seed oil were analyzed. Yields were different depending on the roasting pretreatment and extraction method. Among the extraction methods, the yield of ginseng seed oil from supercritical fluid extraction under the conditions of 500 bar and 65℃ was the highest, at 1...

  6. Partial chemical composition and antimicrobial activity of Daucus crinitus Desf. extracts

    Energy Technology Data Exchange (ETDEWEB)

    Dib, M. A.; Bendahou, M.; Bendiabdellah, A.; Djabou, N.; Allali, H.; Tabti, B.; Paolini, J.; Costa, J.

    2010-07-01

    The chemical composition of fatty acids and the unsaponifiable fraction of the roots, leaves and stems from Daucus crinitus Desf. were, determined using gas chromatography (GC) and gas chromatography-Mass Spectrometry (GC-MS). The fatty acid fractions of different organs (leaves, stems and roots) were characterized by lauric acid (17.9, 17.5 and 18.1 % respectively) and other long chain fatty acids (until C22). Qualitative and quantitative differences were reported between the unsaponifiable fractions of different organs from D. crinitus. The unsaponifiable fractions of the leaves, roots and stem showed high amounts of aliphatic components (83.4%, 87.2% and 91.4%, respectively). The monoterpen, diterpen and sesquiterpen components were only present in small percentages. The antimicrobial properties of the D. critinus extracts were tested on four different microorganisms. These extracts were found to be active against Bacillus cereus, Staphylococcus aureus, Escherichia coli and Candida albicans. (Author) 35 refs.

  7. Bioactive extracts and chemical constituents of two endophytic strains of Fusarium oxysporum

    Directory of Open Access Journals (Sweden)

    Andréa M. do Nascimento

    2012-12-01

    Full Text Available Ethyl acetate extracts of cultures grown in liquid Czapek and on solid rice media of the fungal endophyte Fusarium oxysporum SS46 isolated from the medicinal plant Smallanthus sonchifolius (Poepp. H. Rob., Asteraceae, exhibited considerable cytotoxic activity when tested in vitro against human cancer cells. Chromatographic separation yielded anhydrofusarubin (1 and beauvericin (2 that were identified based on their ¹H and 13C NMR data. Compounds 1 and 2 showed the strongest cytotoxic activity against different cancer cell lines. Compound 2 also showed promising activity against Leishmania braziliensis. Hexanic extract of F. oxysporum SS50 grown on solid rice media also afforded a mixture of compounds that displayed cytotoxic activity against different cancer cell lines. Chemical analysis of the mixture of compounds, investigated by gas chromatography-mass spectrometry (GC-MS, showed that there was a predominance of methyl esters of fatty acids and alkanes.

  8. Coconut oil extraction by the traditional Java method : An investigation of its potential application in aqueous Jatropha oil extraction

    NARCIS (Netherlands)

    Marasabessy, Ahmad; Moeis, Maelita R.; Sanders, Johan P. M.; Weusthuis, Ruud A.

    2010-01-01

    A traditional Java method of coconut oil extraction assisted by paddy crabs was investigated to find out if crabs or crab-derived components can be used to extract oil from Jatropha curcas seed kernels. Using the traditional Java method the addition of crab paste liberated 54% w w(-1) oil from grate

  9. Coconut oil extraction by the Java method: An investigation of its potential application in aqueous Jatropha oil extraction

    NARCIS (Netherlands)

    Marasabessy, A.; Moeis, M.R.; Sanders, J.P.M.; Weusthuis, R.A.

    2010-01-01

    A traditional Java method of coconut oil extraction assisted by paddy crabs was investigated to find out if crabs or crab-derived components can be used to extract oil from Jatropha curcas seed kernels. Using the traditional Java method the addition of crab paste liberated 54% w w-1 oil from grated

  10. Coconut oil extraction by the Java method: An investigation of its potential application in aqueous Jatropha oil extraction

    NARCIS (Netherlands)

    Marasabessy, A.; Moeis, M.R.; Sanders, J.P.M.; Weusthuis, R.A.

    2010-01-01

    A traditional Java method of coconut oil extraction assisted by paddy crabs was investigated to find out if crabs or crab-derived components can be used to extract oil from Jatropha curcas seed kernels. Using the traditional Java method the addition of crab paste liberated 54% w w-1 oil from grated

  11. Coconut oil extraction by the traditional Java method : An investigation of its potential application in aqueous Jatropha oil extraction

    NARCIS (Netherlands)

    Marasabessy, Ahmad; Moeis, Maelita R.; Sanders, Johan P. M.; Weusthuis, Ruud A.

    2010-01-01

    A traditional Java method of coconut oil extraction assisted by paddy crabs was investigated to find out if crabs or crab-derived components can be used to extract oil from Jatropha curcas seed kernels. Using the traditional Java method the addition of crab paste liberated 54% w w(-1) oil from grate

  12. Efficient inclusion body processing using chemical extraction and high gradient magnetic fishing.

    Science.gov (United States)

    Heebøll-Nielsen, Anders; Choe, Woo-Seok; Middelberg, Anton P J; Thomas, Owen R T

    2003-01-01

    In this study we introduce a radical new approach for the recovery of proteins expressed in the form of inclusion bodies, involving (i) chemical extraction from the host cells, (ii) adsorptive capture of the target protein onto small magnetic adsorbents, and (iii) subsequent rapid collection of the product-loaded supports with the aid of high gradient magnetic fields. The manufacture and testing of two types of micron-sized nonporous superparamagnetic metal chelator particles derivatized with iminodiacetic acid is described. In small-scale adsorption studies conducted with a hexahistidine tagged form of the L1 coat protein of human papillomavirus type 16 dissolved in 8 M urea-phosphate buffer, the best binding performance (Q(max) = 58 mg g(-1) and K(d) approximately 0.08 microM) was exhibited by Cu(2+)-charged type II support materials. Equilibrium adsorption of L1 to these nonporous supports was achieved very rapidly (100 mM imidazole in the equilibration buffer. The influence of feedstock complexity on L1 adsorption to the Cu(2+)-charged type II magnetic chelators was studied using various dilutions of four crude chemical E. coli cell extracts containing denatured L1 protein. Undiminished L1 adsorption to these adsorbents (relative to the 8 M urea-phosphate buffer case) was observed with the least complex of these feed materials, i.e., a partially clarified (12 g dry weight L(-1)) and spermine-treated chemical cell extract (feedstock B). Efficient recovery of L1 from feed B was demonstrated at a 60-fold increased scale using the high gradient magnetic fishing (HGMF) system to collect loaded Cu(2+)-chelator particles following batch adsorption of L1. Over 70% of the initial L1 present was recovered within the HGMF rig in a highly clarified form in two batch elution cycles with an overall purification factor of approximately 10.

  13. Alternative and Efficient Extraction Methods for Marine-Derived Compounds

    Directory of Open Access Journals (Sweden)

    Clara Grosso

    2015-05-01

    Full Text Available Marine ecosystems cover more than 70% of the globe’s surface. These habitats are occupied by a great diversity of marine organisms that produce highly structural diverse metabolites as a defense mechanism. In the last decades, these metabolites have been extracted and isolated in order to test them in different bioassays and assess their potential to fight human diseases. Since traditional extraction techniques are both solvent- and time-consuming, this review emphasizes alternative extraction techniques, such as supercritical fluid extraction, pressurized solvent extraction, microwave-assisted extraction, ultrasound-assisted extraction, pulsed electric field-assisted extraction, enzyme-assisted extraction, and extraction with switchable solvents and ionic liquids, applied in the search for marine compounds. Only studies published in the 21st century are considered.

  14. Alternative and efficient extraction methods for marine-derived compounds.

    Science.gov (United States)

    Grosso, Clara; Valentão, Patrícia; Ferreres, Federico; Andrade, Paula B

    2015-05-01

    Marine ecosystems cover more than 70% of the globe's surface. These habitats are occupied by a great diversity of marine organisms that produce highly structural diverse metabolites as a defense mechanism. In the last decades, these metabolites have been extracted and isolated in order to test them in different bioassays and assess their potential to fight human diseases. Since traditional extraction techniques are both solvent- and time-consuming, this review emphasizes alternative extraction techniques, such as supercritical fluid extraction, pressurized solvent extraction, microwave-assisted extraction, ultrasound-assisted extraction, pulsed electric field-assisted extraction, enzyme-assisted extraction, and extraction with switchable solvents and ionic liquids, applied in the search for marine compounds. Only studies published in the 21st century are considered.

  15. A novel method for extraction of a proteinous coagulant from Plantago ovata seeds for water treatment purposes.

    Science.gov (United States)

    Ramavandi, Bahman; Hashemi, Seyedenayat; Kafaei, Raheleh

    2015-01-01

    Several chemicals have been applied in the process of coagulant extraction from herbal seeds, and the best extraction has been obtained in the presence of KCl or NaNO3[1-3], and NaCl [4]. However, the main challenge posed to these methods of coagulant extraction is their relatively low efficiency for water treatment purposes and the formation of dissolved organic matter during the treatment process. In these methods the salts, which have a one-valance metal (Na(+) and K(+)), are deposited in the internal structure and the pore of the coagulant, and may be useful for the coagulation/flocculation process. In this research, we found that modified methods produced more dense protein. Therefore, the modified procedure was better than the older one for removal of turbidity and harness from the contaminated water. Here we describe a method where: •According to the Hardy-Schulze rule, we applied the Fe(3+) ions instead of Na(+) and K(+) for the extraction of protein from Plantago ovata seeds.•The method was narrowed to extract protein by ethanol (defatting) and ammonium acetate and CM-Sepharose (protein extraction).•Two consecutive elutriations of crude extract was directly performed using 0.025-M FeCl3 and 0.05-M FeCl3 according to the basis of the ion-exchange processes.

  16. GPR Signal Denoising and Target Extraction With the CEEMD Method

    KAUST Repository

    Li, Jing

    2015-04-17

    In this letter, we apply a time and frequency analysis method based on the complete ensemble empirical mode decomposition (CEEMD) method in ground-penetrating radar (GPR) signal processing. It decomposes the GPR signal into a sum of oscillatory components, with guaranteed positive and smoothly varying instantaneous frequencies. The key idea of this method relies on averaging the modes obtained by empirical mode decomposition (EMD) applied to several realizations of Gaussian white noise added to the original signal. It can solve the mode-mixing problem in the EMD method and improve the resolution of ensemble EMD (EEMD) when the signal has a low signal-to-noise ratio. First, we analyze the difference between the basic theory of EMD, EEMD, and CEEMD. Then, we compare the time and frequency analysis with Hilbert-Huang transform to test the results of different methods. The synthetic and real GPR data demonstrate that CEEMD promises higher spectral-spatial resolution than the other two EMD methods in GPR signal denoising and target extraction. Its decomposition is complete, with a numerically negligible error.

  17. Highly efficient DNA extraction method from skeletal remains

    Directory of Open Access Journals (Sweden)

    Irena Zupanič Pajnič

    2011-03-01

    Full Text Available Background: This paper precisely describes the method of DNA extraction developed to acquire high quality DNA from the Second World War skeletal remains. The same method is also used for molecular genetic identification of unknown decomposed bodies in routine forensic casework where only bones and teeth are suitable for DNA typing. We analysed 109 bones and two teeth from WWII mass graves in Slovenia. Methods: We cleaned the bones and teeth, removed surface contaminants and ground the bones into powder, using liquid nitrogen . Prior to isolating the DNA in parallel using the BioRobot EZ1 (Qiagen, the powder was decalcified for three days. The nuclear DNA of the samples were quantified by real-time PCR method. We acquired autosomal genetic profiles and Y-chromosome haplotypes of the bones and teeth with PCR amplification of microsatellites, and mtDNA haplotypes 99. For the purpose of traceability in the event of contamination, we prepared elimination data bases including genetic profiles of the nuclear and mtDNA of all persons who have been in touch with the skeletal remains in any way. Results: We extracted up to 55 ng DNA/g of the teeth, up to 100 ng DNA/g of the femurs, up to 30 ng DNA/g of the tibias and up to 0.5 ng DNA/g of the humerus. The typing of autosomal and YSTR loci was successful in all of the teeth, in 98 % dekalof the femurs, and in 75 % to 81 % of the tibias and humerus. The typing of mtDNA was successful in all of the teeth, and in 96 % to 98 % of the bones. Conclusions: We managed to obtain nuclear DNA for successful STR typing from skeletal remains that were over 60 years old . The method of DNA extraction described here has proved to be highly efficient. We obtained 0.8 to 100 ng DNA/g of teeth or bones and complete genetic profiles of autosomal DNA, Y-STR haplotypes, and mtDNA haplotypes from only 0.5g bone and teeth samples.

  18. Heat Recovery from High Temperature Slags: A Review of Chemical Methods

    Directory of Open Access Journals (Sweden)

    Yongqi Sun

    2015-03-01

    Full Text Available Waste heat recovery from high temperature slags represents the latest potential way to remarkably reduce the energy consumption and CO2 emissions of the steel industry. The molten slags, in the temperature range of 1723–1923 K, carry large amounts of high quality energy. However, the heat recovery from slags faces several fundamental challenges, including their low thermal conductivity, inside crystallization, and discontinuous availability. During past decades, various chemical methods have been exploited and performed including methane reforming, coal and biomass gasification, and direct compositional modification and utilization of slags. These methods effectively meet the challenges mentioned before and help integrate the steel industry with other industrial sectors. During the heat recovery using chemical methods, slags can act as not only heat carriers but also as catalysts and reactants, which expands the field of utilization of slags. Fuel gas production using the waste heat accounts for the main R&D trend, through which the thermal heat in the slag could be transformed into high quality chemical energy in the fuel gas. Moreover, these chemical methods should be extended to an industrial scale to realize their commercial application, which is the only way by which the substantial energy in the slags could be extracted, i.e., amounting to 16 million tons of standard coal in China.

  19. In situ assessment of phyto and zooavailability of trace elements: A complementary approach to chemical extraction procedures.

    Science.gov (United States)

    Pauget, Benjamin; Faure, Olivier; Conord, Cyrille; Crini, Nadia; de Vaufleury, Annette

    2015-07-15

    For an accurate risk assessment of sites contaminated by trace elements (TE), measurements of bioavailability must be performed. This is routinely achieved using the standardized 0.01M CaCl2 method. However, the suitability of chemical extractions as proxies of bioavailability is questionable. We analyzed the correlations between chemically estimated TE bioavailability and TE actually accumulated by coupling plant and snails bioindicators. Results showed a better correlation between plant TE contents and CaCl2 fraction while total soil concentration better explained snail TE contents. However in both cases chemical measures were not suitable to predict TE accumulation and bioavailability. Considering the soil properties only improve the estimation of Cr, Ni and Pb accumulation by plants while for snails, TE contents in viscera were dependent both on soil and plant contents and soil properties. It highlights the complementarities of biomonitoring methods to assess bioavailability. This dual approach allows a "physiologically defined" evaluation of bioavailability. Copyright © 2015 Elsevier B.V. All rights reserved.

  20. Discriminative tonal feature extraction method in mandarin speech recognition

    Institute of Scientific and Technical Information of China (English)

    HUANG Hao; ZHU Jie

    2007-01-01

    To utilize the supra-segmental nature of Mandarin tones, this article proposes a feature extraction method for hidden markov model (HMM) based tone modeling. The method uses linear transforms to project F0 (fundamental frequency) features of neighboring syllables as compensations, and adds them to the original F0 features of the current syllable. The transforms are discriminatively trained by using an objective function termed as "minimum tone error", which is a smooth approximation of tone recognition accuracy. Experiments show that the new tonal features achieve 3.82% tone recognition rate improvement, compared with the baseline, using maximum likelihood trained HMM on the normal F0 features. Further experiments show that discriminative HMM training on the new features is 8.78% better than the baseline.

  1. An effective method for network module extraction from microarray data

    Directory of Open Access Journals (Sweden)

    Mahanta Priyakshi

    2012-08-01

    Full Text Available Abstract Background The development of high-throughput Microarray technologies has provided various opportunities to systematically characterize diverse types of computational biological networks. Co-expression network have become popular in the analysis of microarray data, such as for detecting functional gene modules. Results This paper presents a method to build a co-expression network (CEN and to detect network modules from the built network. We use an effective gene expression similarity measure called NMRS (Normalized mean residue similarity to construct the CEN. We have tested our method on five publicly available benchmark microarray datasets. The network modules extracted by our algorithm have been biologically validated in terms of Q value and p value. Conclusions Our results show that the technique is capable of detecting biologically significant network modules from the co-expression network. Biologist can use this technique to find groups of genes with similar functionality based on their expression information.

  2. A method to extract soil water for stable isotope analysis

    Science.gov (United States)

    Revesz, K.; Woods, P.H.

    1990-01-01

    A method has been developed to extract soil water for determination of deuterium (D) and 18O content. The principle of this method is based on the observation that water and toluene form an azeotropic mixture at 84.1??C, but are completely immiscible at ambient temperature. In a specially designed distillation apparatus, the soil water is distilled at 84.1??C with toluene and is separated quantitatively in the collecting funnel at ambient temperature. Traces of toluene are removed and the sample can be analyzed by mass spectrometry. Kerosene may be substituted for toluene. The accuracy of this technique is ?? 2 and ?? 0.2???, respectively, for ??D and ??18O. Reduced accuracy is obtained at low water contents. ?? 1990.

  3. Chemical composition and functional properties of starch extracted from the pejibaye fruit (Bactris gasepaes Kunth.

    Directory of Open Access Journals (Sweden)

    Biano Alves de Melo Neto

    2015-01-01

    Full Text Available This study aimed to establish the chemical composition and functional properties of the starch extracted from the pejibaye fruit (Bactris gasepaes Kunth.. The chemical characterization was evaluated from the determination of starch, amylose, amylopectin, total lipid, protein, ash, moisture and water activity. The water absorption index and the water solubility index were calculated for temperatures between 25 and 90ºC. Low contents of ash and protein were found. The studied starch has 14% moisture, according to the established by law. The water activity value was 0.55, which ensures its microbiological stability. A range of gelatinization between 65 to 70ºC was observed, close to the one of commercial starches. The solubility rate in water was 0.6119% and the absorption rate in water was 1.8252%. These results demonstrated that the starch from the pejibaye fruit has important characteristics for use in the food industry.

  4. Gas purge microsyringe extraction for quantitative direct gas chromatographic-mass spectrometric analysis of volatile and semivolatile chemicals.

    Science.gov (United States)

    Yang, Cui; Piao, Xiangfan; Qiu, Jinxue; Wang, Xiaoping; Ren, Chunyan; Li, Donghao

    2011-03-25

    Sample pretreatment before chromatographic analysis is the most time consuming and error prone part of analytical procedures, yet it is a key factor in the final success of the analysis. A quantitative and fast liquid phase microextraction technique termed as gas purge microsyringe extraction (GP-MSE) has been developed for simultaneous direct gas chromatography-mass spectrometry (GC-MS) analysis of volatile and semivolatile chemicals without cleanup process. Use of a gas flowing system, temperature control and a conventional microsyringe greatly increased the surface area of the liquid phase micro solvent, and led to quantitative recoveries of both volatile and semivolatile chemicals within short extraction time of only 2 min. Recoveries of polycyclic aromatic hydrocarbons (PAHs), organochlorine pesticides (OCPs) and alkylphenols (APs) determined were 85-107%, and reproducibility was between 2.8% and 8.5%. In particular, the technique shows high sensitivity for semivolatile chemicals which is difficult to achieve in other sample pretreatment techniques such as headspace-liquid phase microextraction. The variables affecting extraction efficiency such as gas flow rate, extraction time, extracting solvent type, temperature of sample and extracting solvent were investigated. Finally, the technique was evaluated to determine PAHs, APs and OCPs from plant and soil samples. The experimental results demonstrated that the technique is economic, sensitive to both volatile and semivolatile chemicals, is fast, simple to operate, and allows quantitative extraction. On-site monitoring of volatile and semivolatile chemicals is now possible using this technique due to the simplification and speed of sample treatment.

  5. Accelerated Stability Studies on Dried Extracts of Centella asiatica Through Chemical, HPLC, HPTLC, and Biological Activity Analyses.

    Science.gov (United States)

    Kaur, Ishtdeep; Suthar, Nancy; Kaur, Jasmeen; Bansal, Yogita; Bansal, Gulshan

    2016-10-01

    Regulatory guidelines recommend systematic stability studies on a herbal product to establish its shelf life. In the present study, commercial extracts (Types I and II) and freshly prepared extract (Type III) of Centella asiatica were subjected to accelerated stability testing for 6 months. Control and stability samples were evaluated for organoleptics, pH, moisture, total phenolic content (TPC), asiatic acid, kaempherol, and high-performance thin layer chromatography fingerprints, and for antioxidant and acetylcholinesterase inhibitory activities. Markers and TPC and both the activities of each extract decreased in stability samples with respect to control. These losses were maximum in Type I extract and minimum in Type III extract. Higher stability of Type III extract than others might be attributed to the additional phytoconstituents and/or preservatives in it. Pearson correlation analysis of the results suggested that TPC, asiatic acid, and kaempferol can be taken as chemical markers to assess chemical and therapeutic shelf lives of herbal products containing Centella asiatica.

  6. EXTRACTION AND PHYSICO-CHEMICAL STUDIES OF DIASTASE-LIKE ENZYME FROM PIPER BETLE PETIOLES: PART 1

    OpenAIRE

    Ramasarma, G.V.S; Dutta, Sadhan Kumar

    1995-01-01

    Petioles of the plant piper betle-bengal variety have been subjected for extraction employing standard procedure and the crude extract obtained has been evaluated for its diastase like activity and other physico-chemical properties to investigate further its possible biological and pharmacological activities.

  7. [Optimization of extraction process for tannins from Geranium orientali-tibeticum by supercritical CO2 method].

    Science.gov (United States)

    Xie, Song; Tong, Zhi-Ping; Tan, Rui; Liu, Xiao-Zhen

    2014-08-01

    In order to optimize extraction process conditions of tannins from Geranium orientali-tibeticum by supercritical CO2, the content of tannins was determined by phosphomolybdium tungsten acid-casein reaction, with extraction pressure, extraction temper- ature and extraction time as factors, the content of tannins from extract of G. orientali-tibeticum as index, technology conditions were optimized by orthogonal test. Optimum technology conditions were as follows: extraction pressure was 25 MPa, extraction temperature was 50 °C, extracted 1.5 h. The content of tannins in extract was 12.91 mg x g(-1), extract rate was 3.67%. The method established could be used for assay the contents of tannin in G. orientali-tibeticum. The circulated extraction was an effective extraction process that was stable and feasible, and that provides a way of the extraction process conditions of tannin from G. orientali-tibeticum.

  8. [Optimization of extraction process for tannins from Geranium orientali-tibeticum by supercritical CO2 method].

    Science.gov (United States)

    Xie, Song; Tong, Zhi-Ping; Tan, Rui; Liu, Xiao-Zhen

    2014-08-01

    In order to optimize extraction process conditions of tannins from Geranium orientali-tibeticum by supercritical CO2, the content of tannins was determined by phosphomolybdium tungsten acid-casein reaction, with extraction pressure, extraction temper- ature and extraction time as factors, the content of tannins from extract of G. orientali-tibeticum as index, technology conditions were optimized by orthogonal test. Optimum technology conditions were as follows: extraction pressure was 25 MPa, extraction temperature was 50 °C, extracted 1.5 h. The content of tannins in extract was 12.91 mg x g(-1), extract rate was 3.67%. The method established could be used for assay the contents of tannin in G. orientali-tibeticum. The circulated extraction was an effective extraction process that was stable and feasible, and that provides a way of the extraction process conditions of tannin from G. orientali-tibeticum.

  9. Antimicrobial activities of Eugenia caryophyllata extract and its major chemical constituent eugenol against Streptococcus pneumoniae.

    Science.gov (United States)

    Yadav, Mukesh Kumar; Park, Seok-Won; Chae, Sung-Won; Song, Jae-Jun; Kim, Ho Chul

    2013-12-01

    In this study, we investigate the antimicrobial activities of both Eugenia caryophyllata (Ec) extract and its major component eugenol (4-allyl-2-methoxyphenol) against Streptococcus pneumoniae. The minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) were determined by microdilution method. Pneumococcal biofilms were detected by crystal-violet microtiter plate assay, followed by colony-forming unit counts and visualized by scanning electron microscope (SEM). The synergistic effect of eugenol and penicillin was determined by checker-board method. Both the eugenol and the Ec extract inhibited pneumococcal growth in a concentration-dependent manner. The MIC and MBC of eugenol were 0.06% and 0.12%, respectively. Eugenol at a concentration of 0.12% completely killed S. pneumoniae within 60 min of exposure. The kill rate of planktonic cells was most rapid during the first 15 min of contact with eugenol. The addition of eugenol or Ec extract inhibited in vitro biofilm formation. In already established biofilms, the inhibitory effect of eugenol or Ec extract was more significant in terms of cell viability than in terms of disruption of the biofilm matrix. SEM analysis revealed non-viable and disruptive action of eugenol on the cell membrane of bacteria of biofilms. It was found that eugenol and penicillin produced a synergistic effect against S. pneumoniae. In conclusion, eugenol and Ec extract efficiently inhibited S. pneumoniae in planktonic growth and within biofilms.

  10. Effective separation method of (64)Cu from (67)Ga waste product with a solvent extraction and chromatography.

    Science.gov (United States)

    Kim, J H; Park, H; Chun, K S

    2010-09-01

    A simple chemical process with a solvent extraction was investigated as an effective separation method for (64)Cu radionuclide from waste production, which is collected as solution after extracting (67)Ga and recovering (68)Zn target materials. For the production of radionuclide (67)Ga, the enriched (68)Zn material electroplated on Cu backing plate is usually exposed to energetic protons. The protons produce (67)Ga including other radionuclides, such as (57)Ni, (57,55)Co, (64,67)Cu by several nuclear reactions. After extracting (67)Ga and recovering (68)Zn through several steps of chemical processes, the residual solution is usually discarded even though it contains other species of radioisotopes. In this study, a simple chemical process having a high separation efficiency of (64)Cu from the waste solution was investigated. With this method, a promising radiotracer as a diagnostic in PET and a therapeutic in radio-immunotherapy, (64)Cu was estimated to be produced as high as 1,200mCi at EOB within 3h chemical processing after extraction of (67)Ga and (68)Zn.

  11. Speciation of Fe(II) and Fe(III) in Contaminated Aquifer Sediments Using Chemical Extraction Techniques

    DEFF Research Database (Denmark)

    Heron, Gorm; Crouzet, Catherine.; Bourg, Alain C. M.;

    1994-01-01

    The iron mineralogy of aquifer sediments was described by chemical extraction techniques. Single-step extractions including 1 M CaC12, NaAc, oxalate, dithionite, Ti(II1)- EDTA, 0.5 M HC1,5 M HC1, hot 6 M HC1, and a sequential extraction by HI and CrIIHC1 were tested on standard iron minerals...

  12. CEMS using hot wet extractive method based on DOAS

    Science.gov (United States)

    Sun, Bo; Zhang, Chi; Sun, Changku

    2011-11-01

    A continuous emission monitoring system (CEMS) using hot wet extractive method based on differential optical absorption spectroscopy (DOAS) is designed. The developed system is applied to retrieving the concentration of SO2 and NOx in flue gas on-site. The flue gas is carried along a heated sample line into the sample pool at a constant temperature above the dew point. In this case, the adverse impact of water vapor on measurement accuracy is reduced greatly, and the on-line calibration is implemented. And then the flue gas is discharged from the sample pool after the measuring process is complete. The on-site applicability of the system is enhanced by using Programmable Logic Controller (PLC) to control each valve in the system during the measuring and on-line calibration process. The concentration retrieving method used in the system is based on the partial least squares (PLS) regression nonlinear method. The relationship between the known concentration and the differential absorption feature gathered by the PLS nonlinear method can be figured out after the on-line calibration process. Then the concentration measurement of SO2 and NOx can be easily implemented according to the definite relationship. The concentration retrieving method can identify the information and noise effectively, which improves the measuring accuracy of the system. SO2 with four different concentrations are measured by the system under laboratory conditions. The results proved that the full-scale error of this system is less than 2%FS.

  13. Novel selection methods for DNA-encoded chemical libraries.

    Science.gov (United States)

    Chan, Alix I; McGregor, Lynn M; Liu, David R

    2015-06-01

    Driven by the need for new compounds to serve as biological probes and leads for therapeutic development and the growing accessibility of DNA technologies including high-throughput sequencing, many academic and industrial groups have begun to use DNA-encoded chemical libraries as a source of bioactive small molecules. In this review, we describe the technologies that have enabled the selection of compounds with desired activities from these libraries. These methods exploit the sensitivity of in vitro selection coupled with DNA amplification to overcome some of the limitations and costs associated with conventional screening methods. In addition, we highlight newer techniques with the potential to be applied to the high-throughput evaluation of DNA-encoded chemical libraries.

  14. Method for innovative synthesis-design of chemical process flowsheets

    OpenAIRE

    Kumar Tula, Anjan; Gani, Rafiqul

    2015-01-01

    Chemical process synthesis-design involve the identification of the processing route to reach a desired product from a specified set of raw materials, design of the operations involved in the processing route, the calculations of utility requirements, the calculations of waste and emission to the surrounding and many more. Different methods (knowledge-based [1], mathematical programming [2], hybrid, etc.) have been proposed and are also currently employed to solve these synthesis-design probl...

  15. Development of complementary HPLC-DAD/APCI MS methods for chemical characterization of pharmaceutical packaging materials.

    Science.gov (United States)

    Petruševski, V; Jolevska, S T; Ribarska, J T; Chachorovska, M; Petkovska, A; Ugarković, S

    2016-05-30

    The chemical characterization of plastics for pharmaceutical packaging has been subject to ever increasing regulatory scrutiny, the reasons for which being: a) plastic additives and degradation products can be extremely hazardous to the patients' health (especially patients on chronic therapy) and b) they offer no therapeutic or formulatory benefit whatsoever. The last decade has seen the issuing of several books, monographs and guidelines dealing with extractables and leachables, however the amount of scientific work done so far is still fairly small (the majority of it performed by only a few research groups), with only a small number of methods published in the literature. This work focuses on developing a set of two complementary HPLC-DAD/APCI MS methods for simultaneous separation, detection, identification and quantification of a wide variety of packaging additives and degradants, the second method specifically targeting a group of compounds known as polymeric hindered amine light stabilizers (HALS), which are known to be notoriously difficult to separate and analyze with standard analytical techniques. The methods are capable of detecting plastic additives present in low ppb concentrations, from samples extracted in solvents with various polarities and pH values. Both methods were developed and optimized using system suitability mixtures comprised of 9 additives commonly encountered in plastic materials, and their practical applicability tested on a variety of extracts from low-density polyethylene (LDPE) and polypropylene (PP), where several additives were successfully separated, detected and identified.

  16. Development and validation of a standard test method for sequential batch extraction of waste with acidic extraction fluid

    Energy Technology Data Exchange (ETDEWEB)

    Sorini, S.S.

    1993-08-01

    Subject is characterization of waste materials. Since acid rain is increasingly prevalent throughout the world, a sequential batch extraction method was developed which uses a dilute acid solution as the extraction fluid. A collaborative study was conducted in which the draft method was used to treat a spray dryer waste from a clean coal technology process and a composite mining waste. Effects of filter pore size and digestion vs nondigestion on analytical concentrations in extracts were also studied. Elements determined included Al, Ba, B, Ca, Cr, Si, Na, Sr, Pb, Mg, Mn, Si, Zn. The draft method will be published as ASTM Method D5284-92.

  17. DNA extraction and a cost-effective detection method for Echinococcus granulosus protoscoleces.

    Science.gov (United States)

    Petrigh, R S; Fugassa, M H

    2013-12-01

    Most methods of DNA purification from protoscoleces of Echinococcus granulosus involve the use of expensive kits and may also require a second step after extraction for an effective purification. The present work describes an optimized cost-effective method that is fast and simple. This method is based on a chemical lysis with proteinase K with a subsequent one-step PCR detection. In this study we used already available primers and newly designed primers to amplify two fragments of different size corresponding to the mitochondrial cytochrome C oxidase subunit 1 gene. By one-step PCR, both fragments were successfully amplified from even a single protoscolex. This result demonstrates that this method of extraction is efficient even with small amounts of sample and that PCR is highly sensitive. The major advantage of this lysis-PCR method is that it avoids a second step of purification resulting in a simpler and more economical method. Our research will serve as a base for future studies on E. granulosus genotyping, mainly with wild mammals with a low number of cysts.

  18. Optimizing Fungal DNA Extraction Methods from Aerosol Filters

    Science.gov (United States)

    Jimenez, G.; Mescioglu, E.; Paytan, A.

    2016-12-01

    Fungi and fungal spores can be picked up from terrestrial ecosystems, transported long distances, and deposited into marine ecosystems. It is important to study dust-borne fungal communities, because they can stay viable and effect the ambient microbial populations, which are key players in biogeochemical cycles. One of the challenges of studying dust-borne fungal populations is that aerosol samples contain low biomass, making extracting good quality DNA very difficult. The aim of this project was to increase DNA yield by optimizing DNA extraction methods. We tested aerosol samples collected from Haifa, Israel (polycarbonate filter), Monterey Bay, CA (quartz filter) and Bermuda (quartz filter). Using the Qiagen DNeasy Plant Kit, we tested the effect of altering bead beating times and incubation times, adding three freeze and thaw steps, initially washing the filters with buffers for various lengths of time before using the kit, and adding a step with 30 minutes of sonication in 65C water. Adding three freeze/thaw steps, adding a sonication step, washing with a phosphate buffered saline overnight, and increasing incubation time to two hours, in that order, resulted in the highest increase in DNA for samples from Israel (polycarbonate). DNA yield of samples from Monterey (quart filter) increased about 5 times when washing with buffers overnight (phosphate buffered saline and potassium phophate buffer), adding a sonication step, and adding three freeze and thaw steps. Samples collected in Bermuda (quartz filter) had the highest increase in DNA yield from increasing incubation to 2 hours, increasing bead beating time to 6 minutes, and washing with buffers overnight (phosphate buffered saline and potassium phophate buffer). Our results show that DNA yield can be increased by altering various steps of the Qiagen DNeasy Plant Kit protocol, but different types of filters collected at different sites respond differently to alterations. These results can be used as

  19. A window-based time series feature extraction method.

    Science.gov (United States)

    Katircioglu-Öztürk, Deniz; Güvenir, H Altay; Ravens, Ursula; Baykal, Nazife

    2017-08-09

    This study proposes a robust similarity score-based time series feature extraction method that is termed as Window-based Time series Feature ExtraCtion (WTC). Specifically, WTC generates domain-interpretable results and involves significantly low computational complexity thereby rendering itself useful for densely sampled and populated time series datasets. In this study, WTC is applied to a proprietary action potential (AP) time series dataset on human cardiomyocytes and three precordial leads from a publicly available electrocardiogram (ECG) dataset. This is followed by comparing WTC in terms of predictive accuracy and computational complexity with shapelet transform and fast shapelet transform (which constitutes an accelerated variant of the shapelet transform). The results indicate that WTC achieves a slightly higher classification performance with significantly lower execution time when compared to its shapelet-based alternatives. With respect to its interpretable features, WTC has a potential to enable medical experts to explore definitive common trends in novel datasets. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. Polyphenols: Extraction Methods, Antioxidative Action, Bioavailability and Anticarcinogenic Effects

    Directory of Open Access Journals (Sweden)

    Eva Brglez Mojzer

    2016-07-01

    Full Text Available Being secondary plant metabolites, polyphenols represent a large and diverse group of substances abundantly present in a majority of fruits, herbs and vegetables. The current contribution is focused on their bioavailability, antioxidative and anticarcinogenic properties. An overview of extraction methods is also given, with supercritical fluid extraction highlighted as a promising eco-friendly alternative providing exceptional separation and protection from degradation of unstable polyphenols. The protective role of polyphenols against reactive oxygen and nitrogen species, UV light, plant pathogens, parasites and predators results in several beneficial biological activities giving rise to prophylaxis or possibly even to a cure for several prevailing human diseases, especially various cancer types. Omnipresence, specificity of the response and the absence of or low toxicity are crucial advantages of polyphenols as anticancer agents. The main problem represents their low bioavailability and rapid metabolism. One of the promising solutions lies in nanoformulation of polyphenols that prevents their degradation and thus enables significantly higher concentrations to reach the target cells. Another, more practiced, solution is the use of mixtures of various polyphenols that bring synergistic effects, resulting in lowering of the required therapeutic dose and in multitargeted action. The combination of polyphenols with existing drugs and therapies also shows promising results and significantly reduces their toxicity.

  1. Chemical Composition and Biological Activity of Extracts from Salvia bicolor Desf. Growing in Egypt

    Directory of Open Access Journals (Sweden)

    Taghreed A. Ibrahim

    2012-09-01

    Full Text Available A petroleum ether extract (PEE and a methanolic extract (ME of aerial parts of Salvia bicolor Desf were prepared, and their chemical compositions and antioxidant, anti-inflammatory, analgesic and antimicrobial activities were evaluated. GC/MS analysis of the PEE revealed the presence of 20 compounds in the unsaponifiable matter, among which β-sitosterol and β-amyrin (constituting 24.75% and 15.62%, respectively were the main constituents, and 21 fatty acids, with linolenic acid and erucic acid being the main fatty acid constituents (21.65% and 16.65%, respectively. HPLC/MS analysis of the methanol extract for individual phenolics revealed the presence of 14 phenolic acids; protocatchuic acid was predominant (75.22 mg/g dry sample, followed by p-coumaric, gallic and synergic acids (70.27, 68.26 and 54.38 mg/g dry weight, respectively. HPLC/MS analysis of flavonoid contents revealed the presence of five flavonoid compounds, among which luteolin 7-O-glucoside and apigenin were the major constituents (120.25 mg/100g dry sample and 88.48 mg/100g dry sample, respectively. The antioxidant activities of both extracts were evaluated using the 2,2-diphenyl-1-picrylhydrazyl (DPPH assay, and the total antioxidant capacity was determined in terms of GAE (gallic acid equivalents. Anti-inflammatory and analgesic activities were evaluated using the rat paw edema and hot plate testing methods, respectively. The antimicrobial activities of both the PEE and ME were examined by means of the disk-diffusion method. The Salvia bicolor PEE and ME exhibited significant antioxidant, anti-inflammatory, and analgesic properties, in addition to antimicrobial effects against the selected microorganisms.

  2. Fermentation, fractionation and purification of streptokinase by chemical reduction method

    Directory of Open Access Journals (Sweden)

    M Niakan

    2011-05-01

    Full Text Available Background and Objectives: Streptokinase is used clinically as an intravenous thrombolytic agent for the treatment of acute myocardial infarction and is commonly prepared from cultures of Streptococcus equisimilis strain H46A. The objective of the present study was the production of streptokinase from strain H46A and purification by chemical reduction method."nMaterials and Methods: The rate of streptokinase production evaluated under the effect of changes on some fermentation factors. Moreover, due to the specific structure of streptokinase, a chemical reduction method employed for the purification of streptokinase from the fermentation broth. The H46A strain of group C streptococcus, was grown in a fermentor. The proper pH adjusted with NaOH under glucose feeding in an optimum temperature. The supernatant of the fermentation product was sterilized by filtration and concentrated by ultrafiltration. The pH of the concentrate was adjusted, cooled, and precipitated by methanol. Protein solution was reduced with dithiothreitol (DTT. Impurities settled down by aldrithiol-2 and the biological activity of supernatant containing streptokinase was determined."nResults: In the fed -batch culture, the rate of streptokinase production increased over two times as compared with the batch culture and the impurities were effectively separated from streptokinase by reduction method."nConclusion: Improvements in SK production are due to a decrease in lag phase period and increase in the growth rate of logarithmic phase. The methods of purification often result in unacceptable losses of streptokinase, but the chemical reduction method give high yield of streptokinase and is easy to perform it.

  3. Chemical analysis and antihyperglycemic activity of an original extract from burdock root (Arctium lappa).

    Science.gov (United States)

    Tousch, Didier; Bidel, Luc P R; Cazals, Guillaume; Ferrare, Karine; Leroy, Jeremy; Faucanié, Marie; Chevassus, Hugues; Tournier, Michel; Lajoix, Anne-Dominique; Azay-Milhau, Jacqueline

    2014-08-06

    In the present study, we obtained a dried burdock root extract (DBRE) rich in caffeoylquinic acids derivatives. We performed the chemical characterization of DBRE and explored its antihyperglycemic potential in both in vitro and in vivo experiments. Chemical analysis of DBRE using LC-MS and GC-MS revealed the presence of a great majority of dicaffeoylquinic acid derivatives (75.4%) of which 1,5-di-O-caffeoyl-4-O-maloylquinic acid represents 44% of the extract. In the in vitro experiments, DBRE is able to increase glucose uptake in cultured L6 myocytes and to decrease glucagon-induced glucose output from rat isolated hepatocytes together with a reduction of hepatic glucose 6-phosphatase activity. DBRE did not increase insulin secretion in the INS-1 pancreatic β-cell line. In vivo, DBRE improves glucose tolerance both after intraperitoneal and oral subchronic administration. In conclusion, our data demonstrate that DBRE constitutes an original set of caffeoylquinic acid derivatives displaying antihyperglycemic properties.

  4. Comparison of eight methods of genomic DNA extraction from babassu.

    Science.gov (United States)

    Viana, J P G; Borges, A N C; Lopes, A C A; Gomes, R L F; Britto, F B; Lima, P S C; Valente, S E S

    2015-12-22

    Babassu (Orbignya phalerata Martius) is one of the most important palms in Brazil because of the largest morphological variation, wide geographic distribution, and high socio-economic importance. The diversity present in babassu germplasm should be protected against loss to ensure their use with high productivity. Study of the available variability in populations of babassu is necessary to develop conservation strategies. The study of genetic variability can be conducted using molecular markers and many of these studies require significant quantity of high-quality DNA. The present study aimed to effect comparison among eight DNA extraction methods in case of O. phalerata. The quality and concentration of nucleic acids were analyzed by spectrophotometry and integrity of DNA was ascertained by agarose gel electrophoresis. The spectrophotometry revealed that some methods resulted in high levels of concentration of nucleic acids, in which values of the ratio A260/280 and A260/230 were outside the range of purity. The agarose gel electrophoresis established the concentration and integrity of DNA. The methods of Murray and Thompson (1980) and Ferreira and Grattapaglia (1998) did not result in satisfactory quantities of DNA. Conversely, the method proposed by Khanuja et al. (1999) resulted in DNA of adequate quality and quantity that could be satisfactorily used for amplification reactions performed with two ISSR primers.

  5. The Effect of Homogenization Pressures on Extraction of Avocado Oil by Wet Method

    OpenAIRE

    Basuni Hamzah

    2013-01-01

    Avocado tree usually planted by people of Indonesia in rural are small in scale. Mostly, in the modern and high scale industry especially company has a large avocado farm the extraction of avocado oil is extracted through vacuum drying in low temperature. However, in rural area avocado tree spread out in small number of tree, so it needs alternative method of avocado oil extraction. In this experiment, wet method of avocado extraction was applied similar to traditional extraction of coconut o...

  6. Approximate method for stochastic chemical kinetics with two-time scales by chemical Langevin equations

    Science.gov (United States)

    Wu, Fuke; Tian, Tianhai; Rawlings, James B.; Yin, George

    2016-05-01

    The frequently used reduction technique is based on the chemical master equation for stochastic chemical kinetics with two-time scales, which yields the modified stochastic simulation algorithm (SSA). For the chemical reaction processes involving a large number of molecular species and reactions, the collection of slow reactions may still include a large number of molecular species and reactions. Consequently, the SSA is still computationally expensive. Because the chemical Langevin equations (CLEs) can effectively work for a large number of molecular species and reactions, this paper develops a reduction method based on the CLE by the stochastic averaging principle developed in the work of Khasminskii and Yin [SIAM J. Appl. Math. 56, 1766-1793 (1996); ibid. 56, 1794-1819 (1996)] to average out the fast-reacting variables. This reduction method leads to a limit averaging system, which is an approximation of the slow reactions. Because in the stochastic chemical kinetics, the CLE is seen as the approximation of the SSA, the limit averaging system can be treated as the approximation of the slow reactions. As an application, we examine the reduction of computation complexity for the gene regulatory networks with two-time scales driven by intrinsic noise. For linear and nonlinear protein production functions, the simulations show that the sample average (expectation) of the limit averaging system is close to that of the slow-reaction process based on the SSA. It demonstrates that the limit averaging system is an efficient approximation of the slow-reaction process in the sense of the weak convergence.

  7. comparison of protein extraction methods for the leaves of ficus ...

    African Journals Online (AJOL)

    F. I. Abdullah

    2017-05-01

    May 1, 2017 ... degradation. Based on the results of ... Eze and Dumboff [30] reported that the addition of chlorophyll extract to the standard protein .... protein extraction from recalcitrant plants such as banana (Musa spp.), apple (Malus ...

  8. An efficient and cost-effective method for DNA extraction from athalassohaline soil using a newly formulated cell extraction buffer.

    Science.gov (United States)

    Narayan, Avinash; Jain, Kunal; Shah, Amita R; Madamwar, Datta

    2016-06-01

    The present study describes the rapid and efficient indirect lysis method for environmental DNA extraction from athalassohaline soil by newly formulated cell extraction buffer. The available methods are mostly based on direct lysis which leads to DNA shearing and co-extraction of extra cellular DNA that influences the community and functional analysis. Moreover, during extraction of DNA by direct lysis from athalassohaline soil, it was observed that, upon addition of poly ethylene glycol (PEG), isopropanol or absolute ethanol for precipitation of DNA, salt precipitates out and affecting DNA yield significantly. Therefore, indirect lysis method was optimized for extraction of environmental DNA from such soil containing high salts and low microbial biomass (CFU 4.3 × 10(4) per gram soil) using newly formulated cell extraction buffer in combination with low and high speed centrifugation. The cell extraction buffer composition and its concentration were optimized and PEG 8000 (1 %; w/v) and 1 M NaCl gave maximum cell mass for DNA extraction. The cell extraction efficiency was assessed with acridine orange staining of soil samples before and after cell extraction. The efficiency, reproducibility and purity of extracted DNA by newly developed procedure were compared with previously recognized methods and kits having different protocols including indirect lysis. The extracted environmental DNA showed better yield (5.6 ± 0.7 μg g(-1)) along with high purity ratios. The purity of DNA was validated by assessing its usability in various molecular techniques like restriction enzyme digestion, amplification of 16S rRNA gene using PCR and UV-Visible spectroscopy analysis.

  9. [Optimize the extraction process with supercritical CO2 fluid from lotus leaves by the uniform design and analysis on the chemical constituents by GC-MS].

    Science.gov (United States)

    Yin, Hui-jing; Qian, Yi-fan; Pu, Cun-hai

    2007-04-01

    To study the optimum parameters of the supercritical CO, fluid extraction of lotus leaves and chemical constituents of extractive matters. Supercritical CO2 fluid extraction condition was selected by uniform design. The extraction pressure, extraction temperature, extraction time were three factors in the experiment. GC-MS was applied for analyzing the extraction. The optimum condition were obtained: the extraction pressure was 26 Mpa, the extraction temperature was 40 degrees C, the extracion time was 90 minutes. The major constituent was 1H-Pyrrole-2-carboxaldehyde, 1-ethyl-in extractive matters. Uniform design can optimize the CO2 Supercritical Fluid Extraction process quickly and accuratly with satisfactory results.

  10. Apriori and N-gram Based Chinese Text Feature Extraction Method

    Institute of Scientific and Technical Information of China (English)

    王晔; 黄上腾

    2004-01-01

    A feature extraction, which means extracting the representative words from a text, is an important issue in text mining field. This paper presented a new Apriori and N-gram based Chinese text feature extraction method, and analyzed its correctness and performance. Our method solves the question that the exist extraction methods cannot find the frequent words with arbitrary length in Chinese texts. The experimental results show this method is feasible.

  11. Method for (236)U Determination in Seawater Using Flow Injection Extraction Chromatography and Accelerator Mass Spectrometry.

    Science.gov (United States)

    Qiao, Jixin; Hou, Xiaolin; Steier, Peter; Nielsen, Sven; Golser, Robin

    2015-07-21

    An automated analytical method implemented in a flow injection (FI) system was developed for rapid determination of (236)U in 10 L seawater samples. (238)U was used as a chemical yield tracer for the whole procedure, in which extraction chromatography (UTEVA) was exploited to purify uranium, after an effective iron hydroxide coprecipitation. Accelerator mass spectrometry (AMS) was applied for quantifying the (236)U/(238)U ratio, and inductively coupled plasma mass spectrometry (ICPMS) was used to determine the absolute concentration of (238)U; thus, the concentration of (236)U can be calculated. The key experimental parameters affecting the analytical effectiveness were investigated and optimized in order to achieve high chemical yields and simple and rapid analysis as well as low procedure background. Besides, the operational conditions for the target preparation prior to the AMS measurement were optimized, on the basis of studying the coprecipitation behavior of uranium with iron hydroxide. The analytical results indicate that the developed method is simple and robust, providing satisfactory chemical yields (80-100%) and high analysis speed (4 h/sample), which could be an appealing alternative to conventional manual methods for (236)U determination in its tracer application.

  12. Composição química e atividade biológica de extrato oleoso de própolis: uma alternativa ao extrato etanólico Chemical composition and biological activity of oil propolis extract: an alternative to ethanolic extract

    Directory of Open Access Journals (Sweden)

    Lilian Buriol

    2009-01-01

    Full Text Available Propolis is mostly used as hydroalcoholic extract. Recently there has been a growing number of patents dealing with new solvents for preparing propolis extracts. This study aimed to prepare edible oil propolis extracts and compare their chemical composition and biological activity with ethanolic propolis extracts. ESI-MS and spectrophotometric methods were used for qualitative and quantitative analyses, respectively. Antibacterial activity was evaluated by diffusion in agar. Cytotoxicity was tested by MTT assay using tumor cell lines. The oil is able to extract bioactive compounds from propolis. Further studies are needed to improve extraction efficiency and to characterize the active components.

  13. Enhancing the various solvent extraction method via microwave irradiation for extraction of lipids from marine microalgae in biodiesel production.

    Science.gov (United States)

    Teo, Chee Loong; Idris, Ani

    2014-11-01

    The types of microalgae strains and the method used in lipid extraction have become crucial factors which influence the productivity of crude oil. In this paper, Nannochloropsis sp. and Tetraselmis sp. were chosen as the strains and four different methods were used to extract the lipids: Hara and Radin, Folch, Chen and Bligh and Dyer. These methods were performed by using conventional heating and microwave irradiation methods. Results revealed that highest lipid yield from the different species was obtained using different extraction methods; both under microwave irradiation. The lipid yield for Tetraselmis sp. and Nannochloropsis sp. was highest when Hara and Radin (8.19%), and Folch (8.47%) methods were used respectively under microwave irradiation. The lipids extracted were then transesterified to biodiesel and the quality of the biodiesel was analyzed using the gas chromatography. Copyright © 2014 Elsevier Ltd. All rights reserved.

  14. Chemical study of extracted rockrose and of chars and activated carbons prepared at different temperatures

    Energy Technology Data Exchange (ETDEWEB)

    Pastor-Villegas, J.; Gomez-Serrano, V.; Duran-Valle, C.J.; Higes-Rolando, F.J. [Departamento de Quimica Inorganica, Universidad de Extremadura, Badajoz (Spain)

    1999-04-01

    This paper discusses the chemical composition and chemical structure of rockrose (Cistus ladaniferus L.) extracted into petroleum ether and resulting chars as well as activated carbons. The isothermal temperature of carbonization of extracted rockrose (Jex) in N{sub 2} ranged between 600 and 1000C. The char (C{sub Jex}-600) employed in the preparation of activated carbons was prepared by treatment of Jex at 30-600C. This char was heated in N{sub 2} before activation, which was carried out in CO{sub 2} or steam at 700-950C to 40% burn-off. Chemical analyses, Fourier transform infrared spectroscopy, thermogravimetry and X-ray diffraction techniques have been applied. The extraction does not exert a significant influence on the organic chemical structure of raw material. In ash prepared at 600C from Jex (ash content 1.29%), the major elements are Ca, K, Mg and P; calcite is the main component. When this ash is heated at 950C, lime is the main component. The chars and activated carbons contain carbon-carbon double bonds and ether structures; C{sub Jex}-600 also contains carbonyl groups. The ether groups decrease with the temperature increase. The analyses of chars and activated carbons show an ash content close to 6-8%, and calcite as the main component. The presence of whewellite, CaC{sub 2}O{sub 4}{center_dot}H{sub 2}O, indicates that the pyrolysis is delayed in the preparation of C{sub Jex}-600, that a partial calcium-carboxylate association occurs, and that hydration takes place during storage period. The mineral matter of the activated carbons prepared at 700C depends on the activating agent: calcite is the only component identified using CO{sub 2}, whereas lime, portlandite and vaterite are also identified using steam. At higher temperatures, the mineral matter is practically independent of the activating agent. Probably, CaO transforms into Ca(OH){sub 2} and CaCO{sub 3} during the char and activated carbon storage periods

  15. Extraction of extracellular polymeric substances (EPS) from anaerobic granular sludges: comparison of chemical and physical extraction protocols

    NARCIS (Netherlands)

    Abzac, D' P.; Bordas, F.; Hullebusch, E.; Lens, P.N.L.; Guibaud, G.

    2010-01-01

    The characteristics of the extracellular polymeric substances (EPS) extracted with nine different extraction protocols from four different types of anaerobic granular sludge were studied. The efficiency of four physical (sonication, heating, cationic exchange resin (CER), and CER associated with son

  16. Extraction of extracellular polymeric substances (EPS) from anaerobic granular sludges: comparison of chemical and physical extraction protocols

    NARCIS (Netherlands)

    Abzac, D' P.; Bordas, F.; Hullebusch, E.; Lens, P.N.L.; Guibaud, G.

    2010-01-01

    The characteristics of the extracellular polymeric substances (EPS) extracted with nine different extraction protocols from four different types of anaerobic granular sludge were studied. The efficiency of four physical (sonication, heating, cationic exchange resin (CER), and CER associated with

  17. Assessment of the Extraction Methods for Monitoring Phthalate Emerging Contaminants in Groundwater and Tap Water

    Science.gov (United States)

    Cotto, I.; Padilla, I. Y.; De Jesús, N. H.; Torres, P. M.

    2015-12-01

    Trace organic contaminants such as phthalates, among other chemicals of emerging concerns, have not historically been considered as pollutants but are being detected in water, posing a potential risk to public health and the environment. One of the most common phthalates of particular concern is di-(2-ethylhexyl) phthalate (DEHP), a plasticizer normally found in plastics and consumer products, including: cosmetics, pharmaceuticals, medical devices, food packages, water bottles, and wiring cables. DEHP has been associated with preterm birth, a major cause of neonatal mortality and health complications. This study aims at monitoring the presence and concentration of DEHP and other phthalates in groundwater and tap water systems in Puerto Rico, which has one of the highest rates of preterm birth in the U.S. The Environmental Protection Agency (EPA) suggests a liquid-liquid extraction method that uses methylene chloride as the preferred organic solvent for the extractions. This work presents modified EPA methods that reduce the volume of sample and solvent used, lower the time of analysis, increase productivity, and decrease hazards and waste. Distribution coefficient of DEHP between methylene chloride and water are estimated and related to sample extraction efficiency. Research results indicate that DEHP is in fact distributed between water and methylene chloride with a distribution coefficient average value of 1.24. The study concludes that the sample and solvent volumes have influence on the efficiency but have not an effect on the distribution coefficient. The tests show higher extraction efficiencies for lower DEHP concentrations and higher extraction volumes. Results from the water analysis show presence of DEHP in 55% of groundwater and 44% of tap water samples, indicating a potential exposure through water.

  18. An image segmentation based method for iris feature extraction

    Institute of Scientific and Technical Information of China (English)

    XU Guang-zhu; ZHANG Zai-feng; MA Yi-de

    2008-01-01

    In this article, the local anomalistic blocks such ascrypts, furrows, and so on in the iris are initially used directly asiris features. A novel image segmentation method based onintersecting cortical model (ICM) neural network was introducedto segment these anomalistic blocks. First, the normalized irisimage was put into ICM neural network after enhancement.Second, the iris features were segmented out perfectly and wereoutput in binary image type by the ICM neural network. Finally,the fourth output pulse image produced by ICM neural networkwas chosen as the iris code for the convenience of real timeprocessing. To estimate the performance of the presentedmethod, an iris recognition platform was produced and theHamming Distance between two iris codes was computed tomeasure the dissimilarity between them. The experimentalresults in CASIA vl.0 and Bath iris image databases show thatthe proposed iris feature extraction algorithm has promisingpotential in iris recognition.

  19. A method of extracting operating parameters of a quantum circuit

    Science.gov (United States)

    Sete, Eyob A.; Block, Maxwell; Scheer, Michael; Zanoci, Cris; Vahidpour, Mehrnoosh; Thompson, Dane; Rigetti, Chad

    Rigorous simulation-driven design methods are an essential component of traditional integrated circuit design. We adapt these techniques to the design and development of superconducting quantum integrated circuits by combining classical finite element analysis in the microwave domain with Brune circuit synthesis by Solgun [PhD thesis 2014] and BKD Hamiltonian analysis by Burkard et al. [Phys. Rev. B 69, 064503 (2004)]. Using the Hamiltonian of the quantum circuit, constructed using the synthesized equivalent linear circuit and the nonlinear Josephson junctions' contributions, we extract operating parameters of the quantum circuit such as resonance coupling strength, dispersive shift, qubit anharmonicitiy, and decoherence rates for single-and multi-port quantum circuits. This approach has been experimentally validated and allows the closed-loop iterative simulation-driven development of quantum information processing devices.

  20. Chemical stimulation in unconventional hydrocarbons extraction in the USA: a preliminary environmental risk assessment.

    Science.gov (United States)

    Sutra, Emilie; Spada, Matteo; Burgherr, Peter

    2016-04-01

    While the exploitation of unconventional resources recently shows an extensive development, the stimulation techniques in use in this domain arouse growing public concerns. Often in the shadow of the disputed hydraulic fracturing process, the matrix acidizing is however a complementary or alternative procedure to enhance the reservoir connectivity. Although acidizing processes are widespread within the traditional hydrocarbons sources exploration, the matrix acidizing does not appear to be commonly used in unconventional hydrocarbons formations due to their low permeability. Nonetheless, this process has been recently applied to the Monterey formation, a shale oil play in California. These stimulation fluids are composed by various chemicals, what represents a matter of concern for public as well as for authorities. As a consequence, a risk assessment implying an exposure and toxicity analysis is needed. Focusing on site surface accidents, e.g., leak of a chemical from a storage tank, we develop in this study concentration scenarios for different exposure pathways to estimate the potential environmental risk associated with the use of specific hazardous substances in the matrix acidizing process for unconventional hydrocarbon reservoirs in the USA. Primary, information about the usage of different hazardous substances have been collected in order to extract the most frequently used chemicals. Afterwards, a probabilistic estimation of the environmental risk associated with the use of these chemicals is carried out by comparing the Predicted Environmental Concentrations (PEC) distribution with the Predicted No Effect Concentrations (PNEC) value. The latter is collected from a literature review, whereas the PEC is estimated as probability distribution concentrations in different environmental compartments (e.g., soil) built upon various predefined accident scenarios. By applying a probabilistic methodology for the concentrations, the level at which the used chemicals