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Sample records for cd36 scd36 clusters

  1. Circulating sCD36 levels in patients with non-alcoholic fatty liver disease and controls

    DEFF Research Database (Denmark)

    Heebøll, S; Poulsen, M K; Ornstrup, M J;

    2016-01-01

    . An unhealthy and unbalanced CD36 expression in adipose and hepatic tissue may shift the fatty acid load to the liver.Clinical Trials.gov (NCT01464801, NCT01412645, NCT01446276).International Journal of Obesity accepted article preview online, 05 December 2016. doi:10.1038/ijo.2016.223.......BACKGROUND AND OBJECTIVE: CD36 is implicated in fatty acid uptake in multiple tissues, including hepatocytes and adipocytes. Circulating CD36 (sCD36) is increased in non-alcoholic fatty liver disease (NAFLD).We explored this association further by investigating correlations between sCD36 levels...

  2. Circulating sCD36 levels in patients with non-alcoholic fatty liver disease and controls

    DEFF Research Database (Denmark)

    Heebøll, Sara; Poulsen, Marianne Kjær; Ørnstrup, Marie Juul

    2017-01-01

    BACKGROUND AND OBJECTIVE: CD36 is implicated in fatty acid uptake in multiple tissues, including hepatocytes and adipocytes. Circulating CD36 (sCD36) is increased in non-alcoholic fatty liver disease (NAFLD).We explored this association further by investigating correlations between sCD36 levels....... An unhealthy and unbalanced CD36 expression in adipose and hepatic tissue may shift the fatty acid load to the liver.Clinical Trials.gov (NCT01464801, NCT01412645, NCT01446276).International Journal of Obesity accepted article preview online, 05 December 2016. doi:10.1038/ijo.2016.223....

  3. Circulating sCD36 is associated with unhealthy fat distribution and elevated circulating triglycerides in morbidly obese individuals

    DEFF Research Database (Denmark)

    Knøsgaard, L; Thomsen, S B; Støckel, M;

    2014-01-01

    BACKGROUND: The recently identified circulating sCD36 has been proposed to reflect tissue CD36 expression, and is upregulated in case of obesity, insulin resistance and hepatic steatosis. The aim of this study was to explore the effect of weight loss secondary to bariatric surgery in relation to s......-en-Y gastric bypass were included. Anthropometric measurements and fasting blood samples were collected at a preoperative baseline visit and 3 months after surgery. sCD36 was measured by an in-house assay, whereas insulin sensitivity and the hepatic fat accumulation were estimated by the homeostasis model...

  4. Plasma sCD36 is associated with markers of atherosclerosis, insulin resistance and fatty liver in a nondiabetic healthy population

    DEFF Research Database (Denmark)

    Handberg, A; Højlund, K; Gastaldelli, A;

    2012-01-01

    Insulin resistance is associated with increased CD36 expression in a number of tissues. Moreover, excess macrophage CD36 may initiate atherosclerotic lesions. The aim of this study was to determine whether plasma soluble CD36 (sCD36) was associated with insulin resistance, fatty liver and carotid...

  5. Expression of YKL-40 and sCD36 in serum of experimental periodontitis in rats%YKL-40和sCD36在实验性牙周炎大鼠血清中的表达

    Institute of Scientific and Technical Information of China (English)

    何艳艳; 石丽萍; 王丽

    2014-01-01

    Objective:To investigate the expression of serum YKL-40 and sCD 36 in periodontitis in Rat before and after treatment,to explore the possible pathogenesis between periodontitis and atherosclerosis(AS). Method:36 healthy 2-month-old male Wistar rats were randomly divided into three groups(n=12). The rats with no treatment served as the con-trols(Group A).The second premolars of other 2 groups were ligated with silk,fed with a periodontitis recipe and inoculated with P. gingivalis. After the success of modeling,B group were treated for half a month,abdominal aortic blood and rats were killed,the expression of YKL-40 and sCD36 was measured by ELISA. Result:Untreated periodontitis group respec-tively with the control group,the treatment of periodontitis -based group,compared with serum YKL-40,sCD36 levels were significantly higher (P<0.05). Conclusion:The levels of serum YKL-40,sCD36 was significantly increased in periodontitis groups,and significantly reduced after basic treatment .It suggests that the incidence of periodontitis may affect the devel-opment of the vascular wall inflammation, resulting in atherosclerosis in the occurrence and development of great signifi-cance. But its exact mechanism is still needed further study.%目的:观察大鼠实验性牙周炎基础治疗前后血清中YKL-40和sCD36的表达,探讨牙周炎与动脉粥样硬化(AS)之间的可能发病机制。方法:选取36只2月龄健康雄性Wistar大鼠,随机等分为3组,每组12只。正常对照组(A组)不作任何处理,2个实验组(B组和C组)通过丝线结扎上颌左右第二磨牙牙颈部,并配合牙周炎食谱及接种牙龈卟啉单胞菌(Pg)的方式建立牙周炎模型。建模成功后B组进行基础治疗,C组不进行牙周基础治疗,半个月后腹主动脉采血并处死大鼠,用酶联免疫吸附法检测YKL-40和sCD36的表达。结果:牙周炎未治疗组分别与空白对照组、牙周炎

  6. Soluble CD36- a marker of the (pathophysiological) role of CD36 in the metabolic syndrome?

    DEFF Research Database (Denmark)

    Koonen, Debby P Y; Jensen, Majken K; Handberg, Aase

    2011-01-01

    associated with obesity and lipid components of the metabolic syndrome, with risk of heart disease and type 2 diabetes. Recently, non-cell bound CD36 was identified in human plasma and was termed soluble CD36 (sCD36). In this review we will describe the functions of CD36 in tissues and address the role of s......CD36 is a class B scavenger receptor observed in many cell types and tissues throughout the body. Recent literature has implicated CD36 in the pathogenesis of metabolic dysregulation such as found in obesity, insulin resistance, and atherosclerosis. Genetic variation at the CD36 loci have been...

  7. Circulating CD36 is reduced in HNF1A-MODY carriers.

    Directory of Open Access Journals (Sweden)

    Siobhan Bacon

    Full Text Available INTRODUCTION: Premature atherosclerosis is a significant cause of morbidity and mortality in type 2 diabetes mellitus. Maturity onset diabetes of the young (MODY accounts for approximately 2% of all diabetes, with mutations in the transcription factor; hepatocyte nuclear factor 1 alpha (HNF1A accounting for the majority of MODY cases. There is somewhat limited data available on the prevalence of macrovascular disease in HNF1A-MODY carriers with diabetes. Marked insulin resistance and the associated dyslipidaemia are not clinical features of HNF1A-MODY carriers. The scavenger protein CD36 has been shown to play a substantial role in the pathogenesis of atherosclerosis, largely through its interaction with oxidised LDL. Higher levels of monocyte CD36 and plasma CD36(sCD36 are seen to cluster with insulin resistance and diabetes. The aim of this study was to determine levels of sCD36 in participants with HNF1A-MODY diabetes and to compare them with unaffected normoglycaemic family members and participants with type 2 diabetes mellitus. METHODS: We recruited 37 participants with HNF1A-MODY diabetes and compared levels of sCD36 with BMI-matched participants with type 2 diabetes mellitus and normoglycaemic HNF1A-MODY negative family controls. Levels of sCD36 were correlated with phenotypic and biochemical parameters. RESULTS: HNF1A-MODY participants were lean, normotensive, with higher HDL and lower triglyceride levels when compared to controls and participants with type 2 diabetes mellitus. sCD36 was also significantly lower in HNF1A-MODY participants when compared to both the normoglycaemic family controls and to lean participants with type 2 diabetes mellitus. CONCLUSION: In conclusion, sCD36 is significantly lower in lean participants with HNF1A-MODY diabetes when compared to weight-matched normoglycaemic familial HNF1A-MODY negative controls and to lean participants with type 2 diabetes mellitus. Lower levels of this pro-atherogenic marker may

  8. Identification of the oxidized low-density lipoprotein scavenger receptor CD36 in plasma

    DEFF Research Database (Denmark)

    Handberg, Aase; Levin, Klaus; Højlund, Kurt;

    2006-01-01

    BACKGROUND: Macrophage CD36 scavenges oxidized low-density lipoprotein, leading to foam cell formation, and appears to be a key proatherogenic molecule. Increased expression of CD36 has been attributed to hyperglycemia and to defective macrophage insulin signaling in insulin resistance. Premature...... atherosclerosis is the major cause of morbidity and mortality in type 2 diabetes. Here, we report the identification of a soluble form of CD36 (sCD36) in plasma and hypothesize that sCD36 would be elevated in patients with type 2 diabetes and insulin resistance. METHODS AND RESULTS: sCD36 in plasma...... for the first time. sCD36 is highly related to risk factors of accelerated atherosclerosis in type 2 diabetes such as insulin resistance and glycemic control, and we propose that sCD36 might represent a marker of the metabolic syndrome and a potential surrogate marker of atherosclerosis....

  9. Cluster Differentiating 36 (CD36 Deficiency Attenuates Obesity-Associated Oxidative Stress in the Heart.

    Directory of Open Access Journals (Sweden)

    Mohamed Gharib

    Full Text Available Obesity is often associated with a state of oxidative stress and increased lipid deposition in the heart. More importantly, obesity increases lipid influx into the heart and induces excessive production of reactive oxygen species (ROS leading to cell toxicity and metabolic dysfunction. Cluster differentiating 36 (CD36 protein is highly expressed in the heart and regulates lipid utilization but its role in obesity-associated oxidative stress is still not clear.The aim of this study was to determine the impact of CD36 deficiency on cardiac steatosis, oxidative stress and lipotoxicity associated with obesity.Studies were conducted in control (Lean, obese leptin-deficient (Lepob/ob and leptin-CD36 double null (Lepob/obCD36-/- mice. Compared to lean mice, cardiac steatosis, and fatty acid (FA uptake and oxidation were increased in Lepob/ob mice, while glucose uptake and oxidation was reduced. Moreover, insulin resistance, oxidative stress markers and NADPH oxidase-dependent ROS production were markedly enhanced. This was associated with the induction of NADPH oxidase expression, and increased membrane-associated p47phox, p67phox and protein kinase C. Silencing CD36 in Lepob/ob mice prevented cardiac steatosis, increased insulin sensitivity and glucose utilization, but reduced FA uptake and oxidation. Moreover, CD36 deficiency reduced NADPH oxidase activity and decreased NADPH oxidase-dependent ROS production. In isolated cardiomyocytes, CD36 deficiency reduced palmitate-induced ROS production and normalized NADPH oxidase activity.CD36 deficiency prevented obesity-associated cardiac steatosis and insulin resistance, and reduced NADPH oxidase-dependent ROS production. The study demonstrates that CD36 regulates NADPH oxidase activity and mediates FA-induced oxidative stress.

  10. Genetics of Cd36 and the clustering of multiple cardiovascular risk factors in spontaneous hypertension.

    Science.gov (United States)

    Pravenec, M; Zidek, V; Simakova, M; Kren, V; Krenova, D; Horky, K; Jachymova, M; Mikova, B; Kazdova, L; Aitman, T J; Churchill, P C; Webb, R C; Hingarh, N H; Yang, Y; Wang, J M; Lezin, E M; Kurtz, T W

    1999-06-01

    Disorders of carbohydrate and lipid metabolism have been reported to cluster in patients with essential hypertension and in spontaneously hypertensive rats (SHRs). A deletion in the Cd36 gene on chromosome 4 has recently been implicated in defective carbohydrate and lipid metabolism in isolated adipocytes from SHRs. However, the role of Cd36 and chromosome 4 in the control of blood pressure and systemic cardiovascular risk factors in SHRs is unknown. In the SHR. BN-Il6/Npy congenic strain, we have found that transfer of a segment of chromosome 4 (including Cd36) from the Brown Norway (BN) rat onto the SHR background induces reductions in blood pressure and ameliorates dietary-induced glucose intolerance, hyperinsulinemia, and hypertriglyceridemia. These results demonstrate that a single chromosome region can influence a broad spectrum of cardiovascular risk factors involved in the hypertension metabolic syndrome. However, analysis of Cd36 genotypes in the SHR and stroke-prone SHR strains indicates that the deletion variant of Cd36 was not critical to the initial selection for hypertension in the SHR model. Thus, the ability of chromosome 4 to influence multiple cardiovascular risk factors, including hypertension, may depend on linkage of Cd36 to other genes trapped within the differential segment of the SHR. BN-Il6/Npy strain.

  11. Circulating CD36 Is Reduced in HNF1A-MODY Carriers.

    LENUS (Irish Health Repository)

    Bacon, Siobhan

    2013-01-01

    Premature atherosclerosis is a significant cause of morbidity and mortality in type 2 diabetes mellitus. Maturity onset diabetes of the young (MODY) accounts for approximately 2% of all diabetes, with mutations in the transcription factor; hepatocyte nuclear factor 1 alpha (HNF1A) accounting for the majority of MODY cases. There is somewhat limited data available on the prevalence of macrovascular disease in HNF1A-MODY carriers with diabetes. Marked insulin resistance and the associated dyslipidaemia are not clinical features of HNF1A-MODY carriers. The scavenger protein CD36 has been shown to play a substantial role in the pathogenesis of atherosclerosis, largely through its interaction with oxidised LDL. Higher levels of monocyte CD36 and plasma CD36(sCD36) are seen to cluster with insulin resistance and diabetes. The aim of this study was to determine levels of sCD36 in participants with HNF1A-MODY diabetes and to compare them with unaffected normoglycaemic family members and participants with type 2 diabetes mellitus.

  12. Differential effects of strength training and testosterone treatment on soluble CD36 in aging men

    DEFF Research Database (Denmark)

    Glintborg, Dorte; Christensen, Louise L; Kvorning, Thue

    2015-01-01

    PURPOSE: We measured soluble CD36 (sCD36) and body composition to determine the effects of testosterone treatment (TT) and/or strength training (ST) on cardiovascular risk in men with low normal testosterone levels. METHODS: Double-blinded, placebo-controlled study in 54 men aged 60-78 years...

  13. Differential effects of strength training and testosterone treatment on soluble CD36 in aging men

    DEFF Research Database (Denmark)

    Glintborg, Dorte; Christensen, Louise L; Kvorning, Thue;

    2015-01-01

    PURPOSE: We measured soluble CD36 (sCD36) and body composition to determine the effects of testosterone treatment (TT) and/or strength training (ST) on cardiovascular risk in men with low normal testosterone levels. METHODS: Double-blinded, placebo-controlled study in 54 men aged 60-78 years...... central fat mass (r = 0.84). CONCLUSIONS: Compared to testosterone treatment, six months of strength training reduced sCD36 levels suggesting decreased cardiovascular risk, possibly due to a reduction in central fat mass....

  14. Differential effects of strength training and testosterone treatment on soluble CD36 in aging men: Possible relation to changes in body composition

    DEFF Research Database (Denmark)

    Glintborg, Dorte; Christensen, Louise L; Kvorning, Thue

    2015-01-01

    Purpose. We measured soluble CD36 (sCD36) and body composition to determine the effects of testosterone treatment (TT) and/or strength training (ST) on cardiovascular risk in men with low normal testosterone levels. Methods. Double-blinded, placebo-controlled study in 54 men aged 60-78 years....... units] vs. TT and vs. placebo (p change bioavailable testosterone and lean body mass. Fat mass measures significantly improved during ST + placebo, ST + TT, and TT vs. placebo. During ST + placebo, delta sCD36 was associated with delta total fat mass (r = 0.81) and delta...

  15. Soluble CD36 and risk markers of insulin resistance and atherosclerosis are elevated in polycystic ovary syndrome and significantly reduced during pioglitazone treatment

    DEFF Research Database (Denmark)

    Glintborg, Dorte; Højlund, Kurt; Andersen, Marianne;

    2008-01-01

    OBJECTIVE: We investigated the relation between soluble CD36 (sCD36), risk markers of atherosclerosis and body composition, and glucose and lipid metabolism in polycystic ovary syndrome (PCOS). RESEARCH DESIGN AND METHODS: Thirty PCOS patients were randomized to 30 mg/day pioglitazone or placebo ...... improving insulin-stimulated glucose metabolism, further supporting the association between sCD36 and insulin resistance in PCOS. Udgivelsesdato: 2008-Feb...... for 16 weeks. Fourteen weight-matched healthy female subjects were included as control subjects. sCD36, oxidized LDL (oxLDL), high-sensitivity C-reactive protein (hsCRP), interleukin (IL)-6, euglycemic-hyperinsulinemic clamps, and whole-body dual-energy X-ray absorptiometry scans were performed. RESULTS...

  16. Construction of eukaryotic expression vector of recombinant human platelet CD36 gene and protein expression%重组人血小板CD36基因真核表达载体的构建及蛋白表达

    Institute of Scientific and Technical Information of China (English)

    付丽辉; 汪德清; 张杰; 孙春昀; 陈麟凤; 冯倩; 罗圆圆; 张晓娟; 王可; 于洋

    2012-01-01

    Objective To construct eukaryotic expression vector of recombinant human platelet CD36 gene , and to purified the functional protein of extracellular amino acid residues 30 to 439 segments. Methods The total of RNA was extracted from human liver tissue and the cDNA encoding human platelet CD36 antigen extracellular region (Gly30 ~ Asn439) residues amplified by RT-PCR. The cDNA was cloned into the prokaryotic expression vector pMD18 and the recombinant vector was transformed into E. Coli DH5ct- We screened positive recombinant pMD18-CD36 plasmid. After sequencing, the gene inserted into the transient eukaryotic expression vector pTE2,constructed the pTE2-s-CD36-10 his transient eukaryotic expression vector. Then the recombinant CD36 Gly30 ~ Asn439 expressed by HEK-293 cells and was purified with Ni2 + 2NTA chromatography. Results 1.4 kb cDNA was amplified by RT-PCR,sequence analysis of the results was exactly the same as NM_001001547.2 in Genebank. Plasmid transfected HEK-293 cells, SDS-PAGE confirmed that cells expressed the human CD36 antigen extracellular protein fragments. Conclusion The CD36 Gly30 ~ Asn439 can be highly expressed by human embryonic kidney cells (HEK293). The purified protein should be pave the way for future study.%目的 制备具有功能活性的重组人血小板表面CD36抗原的纯化表达蛋白胞外区30 ~439氨基酸残基段.方法 提取人肝细胞组织总RNA,经RT-PCR扩增编码人血小板CD36抗原胞外区(Gly30~Asn439)氨基酸残基cDNA,构建于原核表达载体pMD18并转化大肠杆菌DH5α,筛选获得阳性重组子pMD18-CD36,提取质粒.经序列测定后,将该基因插入到真核细胞瞬时表达载体pTE2上,构建成为pTE2-s-CD36-10 his真核瞬时表达载体.采用lipofectamine 2000 (invitrogen)转染法,将重组质粒转染HEK-293细胞,表达产物经Ni2+ 2NTA柱层析纯化.结果 RT-PCR扩增获得了1.4kb的片段.invitrogen测序,该序列分析结果与Genebank中的NM_001001547.2完

  17. 鼠抗人血小板CD36分子单克隆抗体的制备及活性分析%Preparation and Activity Analysis of Mouse Anti Human Platelet CD36 Monoclonal Antibody

    Institute of Scientific and Technical Information of China (English)

    陈麟凤; 张杰; 杨嘉慧; 罗圆圆; 庄远; 李卉; 冯倩; 汪德清

    2013-01-01

    本研究旨在制备具有功能活性的重组人血小板表面CD36抗原的鼠抗人单克隆抗体.提取人肝细胞总RNA,经RT-PCR扩增编码人血小板CD36抗原胞外区(Gly30-Asn439)氨基酸残基cDNA,构建于原核表达载体pMD18并转化大肠杆菌DH5α,筛选获得阳性重组子pMD18-CD36,提取质粒.经序列测定后,将该基因插入到真核细胞瞬时表达载体pTE2上,构建成为pTE2-s-CD36-10 His真核瞬时表达载体.采用lipofectamine 2000转染法,将重组质粒转染至HEK293细胞,表达产物经Ni2+2NTA柱层析纯化.以制备的重组CD36蛋白免疫BALB/c小鼠后,取脾与小鼠骨髓瘤细胞融合,筛选出阳性克隆,行Western blot检测抗体结合活性.结果显示:RT-PCR扩增获得了1.4 kb的片段.经测序,该序列分析结果与GenBank中的NM_001001547.2完全一致.SDS-PAGE证实转染的HEK293细胞表达了人CD36抗原胞外区蛋白片段.鼠单克隆抗体在Western blot中可以识别重组CD36蛋白,灵敏度达到8 ng.结论:成功制备了抗人血小板CD36单克隆抗体,为临床筛选CD36阴性患者及献血员、深入研究人血小板CD36表面抗原对血小板输注无效的影响提供了实验基础.%This study was purposed to prepare eukaryotic expression vector of recombinant human platelet CD36 gene. The total RNA was extracted from human liver tissue and the cDNA encoding human platelet CD36 antigen extracellular region ( Gly30 - Asn439) was amplified by RT-PCR. The cDNA was cloned into the prokaryotic expression vector pMD18 and the recombinant vector was transformed into E. coli DH5a. The positive recombinant pMD18-CD36 plasmid was screened. After sequencing, this combinant vector was inserted into the transient eukaryotic expression vector pTE2, the pTE2-s-CD36-10 His transient eukaryotic expression vector was constructed. The recombinant CD36 Gly30 - Asn439 expressed by HEK-293 cells was purifid with Ni2 + 2NTA chromatography. The results showed that 1.4 kb cDNA was

  18. Comparative Studies of Vertebrate Platelet Glycoprotein 4 (CD36

    Directory of Open Access Journals (Sweden)

    Roger S. Holmes

    2012-09-01

    Full Text Available Platelet glycoprotein 4 (CD36 (or fatty acyl translocase [FAT], or scavenger receptor class B, member 3 [SCARB3] is an essential cell surface and skeletal muscle outer mitochondrial membrane glycoprotein involved in multiple functions in the body. CD36 serves as a ligand receptor of thrombospondin, long chain fatty acids, oxidized low density lipoproteins (LDLs and malaria-infected erythrocytes. CD36 also influences various diseases, including angiogenesis, thrombosis, atherosclerosis, malaria, diabetes, steatosis, dementia and obesity. Genetic deficiency of this protein results in significant changes in fatty acid and oxidized lipid uptake. Comparative CD36 amino acid sequences and structures and CD36 gene locations were examined using data from several vertebrate genome projects. Vertebrate CD36 sequences shared 53–100% identity as compared with 29–32% sequence identities with other CD36-like superfamily members, SCARB1 and SCARB2. At least eight vertebrate CD36 N-glycosylation sites were conserved which are required for membrane integration. Sequence alignments, key amino acid residues and predicted secondary structures were also studied. Three CD36 domains were identified including cytoplasmic, transmembrane and exoplasmic sequences. Conserved sequences included N- and C-terminal transmembrane glycines; and exoplasmic cysteine disulphide residues; TSP-1 and PE binding sites, Thr92 and His242, respectively; 17 conserved proline and 14 glycine residues, which may participate in forming CD36 ‘short loops’; and basic amino acid residues, and may contribute to fatty acid and thrombospondin binding. Vertebrate CD36 genes usually contained 12 coding exons. The human CD36 gene contained transcription factor binding sites (including PPARG and PPARA contributing to a high gene expression level (6.6 times average. Phylogenetic analyses examined the relationships and potential evolutionary origins of the vertebrate CD36 gene with vertebrate

  19. Oral Fat Sensing and CD36 Gene Polymorphism in Algerian Lean and Obese Teenagers.

    Science.gov (United States)

    Daoudi, Hadjer; Plesník, Jiří; Sayed, Amira; Šerý, Omar; Rouabah, Abdelkader; Rouabah, Leila; Khan, Naim Akhtar

    2015-11-04

    Growing number of evidences have suggested that oral fat sensing, mediated by a glycoprotein CD36 (cluster of differentiation 36), plays a significant role in the development of obesity. Indeed, a decreased expression of CD36 in some obese subjects is associated with high dietary fat intake. In the present study, we examined whether an increase in body mass index (BMI) is associated with altered oleic acid lingual detection thresholds and blood lipid profile in young Algerian teenagers (n = 165). The obese teenagers (n = 83; 14.01 ± 0.19 years; BMI z-score 2.67 ± 0.29) exhibited higher lingual detection threshold for oleic acid than lean participants (n = 82, 13.92 ± 0.23 years; BMI z-score 0.03 ± 0.0001). We also studied the association between rs1761667 polymorphism of CD36 gene and obesity. The AA and AG genotypes were more frequent in obese teenagers, whereas GG genotype was more common in lean participants. The A-allele frequency was higher in obese teenagers than that in lean children. We report that rs1761667 polymorphism of CD36 gene and oro-gustatory thresholds for fat might play a significant role in the development of obesity in young teenagers.

  20. Oral Fat Sensing and CD36 Gene Polymorphism in Algerian Lean and Obese Teenagers

    Directory of Open Access Journals (Sweden)

    Hadjer Daoudi

    2015-11-01

    Full Text Available Growing number of evidences have suggested that oral fat sensing, mediated by a glycoprotein CD36 (cluster of differentiation 36, plays a significant role in the development of obesity. Indeed, a decreased expression of CD36 in some obese subjects is associated with high dietary fat intake. In the present study, we examined whether an increase in body mass index (BMI is associated with altered oleic acid lingual detection thresholds and blood lipid profile in young Algerian teenagers (n = 165. The obese teenagers (n = 83; 14.01 ± 0.19 years; BMI z-score 2.67 ± 0.29 exhibited higher lingual detection threshold for oleic acid than lean participants (n = 82, 13.92 ± 0.23 years; BMI z-score 0.03 ± 0.0001. We also studied the association between rs1761667 polymorphism of CD36 gene and obesity. The AA and AG genotypes were more frequent in obese teenagers, whereas GG genotype was more common in lean participants. The A-allele frequency was higher in obese teenagers than that in lean children. We report that rs1761667 polymorphism of CD36 gene and oro-gustatory thresholds for fat might play a significant role in the development of obesity in young teenagers.

  1. CD36 deficiency in mice impairs lipoprotein lipase-mediated triglyceride clearance

    NARCIS (Netherlands)

    Goudriaan, [No Value; den Boer, MAM; Rensen, PCN; Febbraio, M; Kuipers, F; Romijn, JA; Havekes, LM; Voshol, PJ

    2005-01-01

    CD36 is involved in high-affinity peripheral FFA uptake. CD36-deficient (cd36(-/-)) mice exhibit increased plasma FFA and triglyceride (TG) levels. The aim of the present study was to elucidate the cause of the increased plasma TG levels in cd36(-/-) mice. cd36(-/-) mice showed no differences in hep

  2. Hemoglobin A1c induced down-regulation of CD36 of Plasmodium Falciparum parasitized red cell

    Directory of Open Access Journals (Sweden)

    Hassan Hijazi, Atif Alagib, Hisham Waggiallah

    2014-03-01

    Full Text Available Objective: High values of glycosylated hemoglobin have been found to correlate with decreased deformability of erythrocyte. CD36 (Cluster of Differentiation 36 is an integral membrane protein found on the surface of many cell types of class B scavenger receptor family. Plasmodium falciparum and diabetes mellitus is associated many complications. Aim of this study to investigate the down-regulation of HbA1c to CD36 on P. falciparum parasitized red blood cells Diabetes mellitus patients. Methods: This is cross section study conducted among diabetic patients attending in Jabir Abo Eleiz diabetic center in Khartoum state. Venous blood samples were collected in heparin containers for Plasmodium falciparum culture, and random blood sugar. For HbA1c in 0.04 mg EDTA anticoagulant, 2-5 ml of blood was collected. Sample size was 45 samples and was collected from known diabetic patients with HbA1c more than 8%. All data were analyzed by using Statistical Package for Social Science (SPSS. Results: show the mean difference between CD36 negative control and CD36 positive control was found to be statistically significant increasing of CD36 presence at P. value =0.001 (P ≤0.001. The mean difference between CD36 positive control and diabetic patients with HbA1C more 8% was found to be statistically significant reduction of CD36 expression at p=0.001. Conclusion: Hyperglycemia (HbA1c leads to decrease of CD36 expression and interfere with innate and active immunity. In this study HbA1c participates in increasing of P. falciparum malaria complications.

  3. The origin of circulating CD36 in type 2 diabetes

    OpenAIRE

    2013-01-01

    Objective: Elevated plasma levels of the fatty acid transporter, CD36, have been shown to constitute a novel biomarker for type 2 diabetes mellitus (T2DM). We recently reported such circulating CD36 to be entirely associated with cellular microparticles (MPs) and aim here to determine the absolute levels and cellular origin(s) of these CD36+MPs in persons with T2DM. Design: An ex vivo case-control study was conducted using plasma samples from 33 obese individuals with T2DM (body mass index (B...

  4. Polymorphism of CD36 gene, carbohydrate metabolism and plasma CD36 concentration in obese children. A preliminary study 

    Directory of Open Access Journals (Sweden)

    Monika E. Rać

    2012-11-01

    Full Text Available Introduction:CD36 may play an important role in removal of oxidized LDLs from plasma, protein glycation, the pathogenesis of insulin resistance, type 2 diabetes, and diabetic micro- and macroangiopathy. Some reports have pointed to decreased expression of macrophages in association with mutations of the CD36 gene in hyperglycemic and obese subjects. The aim of the study was to search for an association between CD36 gene polymorphism and carbohydrate metabolism disturbances or variability of plasma soluble CD36 concentrations in obese children.Material/Methods:The study included 60 children aged 10 to 15 years: 30 with (study group and 30 without (control group obesity. Each patient’s glycated hemoglobin, weight, height, waist and hip circumference, and systolic and diastolic blood pressure were measured, BMI, WHR and MAP were calculated, and oral glucose tolerance test was performed with glucose and insulin concentration measurements. Amplicons of exons 4–6 of CD36 were studied using DHPLC technique. The PCR products with alterations were bidirectionally sequenced. Plasma concentrations of human antigen CD36 was measured using a commercially available enzyme-linked immunosorbent assay (ELISA.Results:We found two intronic alterations: IVS3-6 T/C (rs3173798 and IVS4-10 G/A (rs3211892, one nonsynonymous substitution: G367A (Glu123Lys, rs183461468 in exon 5 and two synonymous transitions in exon 6: G573A (Pro191Pro, rs5956 and A591T (Thr197Thr, rs141680676. There were no significant differences in any biochemical or morphometric parameters between genotype groups.Discussion:The polymorphisms of the studied fragment of CD36 are not associated with carbohydrate metabolism disturbances or the variability of plasma soluble CD36 concentrations in obese children, but further research is necessary to assess their functional implications. 

  5. Identification of the odor-active volatile compound (Z,Z)-4,7-tridecadienal as a potential ligand for the transmembrane receptor CD36.

    Science.gov (United States)

    Tsuzuki, Satoshi; Amitsuka, Takahiko; Okahashi, Tatsuya; Kozai, Yuki; Yamasaki, Masayuki; Inoue, Kazuo; Fushiki, Tohru

    2016-01-01

    Cluster of differentiation 36 (CD36) is a broadly expressed transmembrane protein that has multiple ligands, including oxidized low-density lipoproteins. We found recently that CD36 is expressed in olfactory sensory neurons and postulated that it plays a role in the detection of distinct odorants in the nasal cavity. To date, however, there have been few examples of attempts to identify CD36-recognizable odorants. In this study, by an in vitro assay using a peptide mimic of the receptor, we provided evidence that CD36 recognizes (Z,Z)-4,7-tridecadienal, an odor-active volatile compound that is known to occur in Katsuobushi (dried, fermented, and smoked skipjack tuna commonly used in Japanese cuisine as a seasoning) and in the preorbital secretion of male oribi. In addition, by comparing the data with those of its related compounds, we provided information on the structural requirements of (Z,Z)-4,7-tridecadienal for recognition by CD36. For instance, we showed that flexible rotation around the C2-C3 bond of the volatile may be of importance in gaining access to CD36. Identification of (Z,Z)-4,7-tridecadienal as the ligand prompts us to hypothesize that CD36 could participate in the control of distinct mammalian behaviors (e.g., food selection) through its ability to recognize specific odorants in the environment.

  6. Leishmania amazonensis Engages CD36 to Drive Parasitophorous Vacuole Maturation.

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    Kendi Okuda

    2016-06-01

    Full Text Available Leishmania amastigotes manipulate the activity of macrophages to favor their own success. However, very little is known about the role of innate recognition and signaling triggered by amastigotes in this host-parasite interaction. In this work we developed a new infection model in adult Drosophila to take advantage of its superior genetic resources to identify novel host factors limiting Leishmania amazonensis infection. The model is based on the capacity of macrophage-like cells, plasmatocytes, to phagocytose and control the proliferation of parasites injected into adult flies. Using this model, we screened a collection of RNAi-expressing flies for anti-Leishmania defense factors. Notably, we found three CD36-like scavenger receptors that were important for defending against Leishmania infection. Mechanistic studies in mouse macrophages showed that CD36 accumulates specifically at sites where the parasite contacts the parasitophorous vacuole membrane. Furthermore, CD36-deficient macrophages were defective in the formation of the large parasitophorous vacuole typical of L. amazonensis infection, a phenotype caused by inefficient fusion with late endosomes and/or lysosomes. These data identify an unprecedented role for CD36 in the biogenesis of the parasitophorous vacuole and further highlight the utility of Drosophila as a model system for dissecting innate immune responses to infection.

  7. Alternative promoter usage of the membrane glycoprotein CD36

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    Whatling Carl

    2006-03-01

    Full Text Available Abstract Background CD36 is a membrane glycoprotein involved in a variety of cellular processes such as lipid transport, immune regulation, hemostasis, adhesion, angiogenesis and atherosclerosis. It is expressed in many tissues and cell types, with a tissue specific expression pattern that is a result of a complex regulation for which the molecular mechanisms are not yet fully understood. There are several alternative mRNA isoforms described for the gene. We have investigated the expression patterns of five alternative first exons of the CD36 gene in several human tissues and cell types, to better understand the molecular details behind its regulation. Results We have identified one novel alternative first exon of the CD36 gene, and confirmed the expression of four previously known alternative first exons of the gene. The alternative transcripts are all expressed in more than one human tissue and their expression patterns vary highly in skeletal muscle, heart, liver, adipose tissue, placenta, spinal cord, cerebrum and monocytes. All alternative first exons are upregulated in THP-1 macrophages in response to oxidized low density lipoproteins. The alternative promoters lack TATA-boxes and CpG islands. The upstream region of exon 1b contains several features common for house keeping gene and monocyte specific gene promoters. Conclusion Tissue-specific expression patterns of the alternative first exons of CD36 suggest that the alternative first exons of the gene are regulated individually and tissue specifically. At the same time, the fact that all first exons are upregulated in THP-1 macrophages in response to oxidized low density lipoproteins may suggest that the alternative first exons are coregulated in this cell type and environmental condition. The molecular mechanisms regulating CD36 thus appear to be unusually complex, which might reflect the multifunctional role of the gene in different tissues and cellular conditions.

  8. Structure-Function of CD36 and Importance of Fatty Acid Signal Transduction in Fat Metabolism

    OpenAIRE

    Pepino, Marta Yanina; Kuda, Ondrej; Samovski, Dmitri; Abumrad, Nada A.

    2014-01-01

    CD36 is a scavenger receptor that functions in high affinity tissue uptake of long chain fatty acids (FA) and contributes under excessive fat supply to lipid accumulation and metabolic dysfunction. This review describes recent evidence regarding the CD36 FA binding site and a potential mechanism for FA transfer. It also presents the view that CD36 and FA signaling coordinate fat utilization based on newly identified CD36 actions that involve oral fat perception, intestinal fat absorption, sec...

  9. Molecular cloning and gene/protein expression of FAT/CD36 from grass carp (Ctenopharyngodon idella) and the regulation of its expression by dietary energy.

    Science.gov (United States)

    Tian, Juan; Liu, Wei; Gao, Weihua; Wu, Fan; Yu, Lijuan; Lu, Xing; Yang, Chang-Geng; Jiang, Ming; Wen, Hua

    2017-01-18

    Fatty acid translocase/cluster of differentiation 36 (FAT/CD36) functions as a membrane long-chain fatty acid transporter in various tissues in land animals. Not much is known about the CD36 molecule in teleost fish. Therefore, we studied CD36 in grass carp (Ctenopharyngodon idella, ciCD36). The full-length complementary DNA sequence of ciCD36 was 1976 bp, with an ORF of 468 amino acids, which had high sequence similarity to the CD36 of common carp. The messenger RNA (mRNA) expression of ciCD36 was high in the intestine, heart, liver, visceral tissue, and brain, but absent in the kidney. The protein expression of ciCD36 was high in the brain, intestine, liver, heart, muscle, eye, visceral tissue, gonad, and gill, but not in the kidney. Four groups of grass carp (16 tanks) were fed three times daily to satiation with 17.2 kJ gross energy/g diet (control, CON), 19.4 kJ gross energy/g diet (more energy supplied by proteins, HP), 19.9 kJ gross energy/g diet (more energy supplied by fat, HF), and 19.1 kJ gross energy/g diet (more energy supplied by carbohydrate, HC) for 11 weeks, respectively. At the end of the feeding experiment, the fish were fasted for 48 h, and the brain, heart, intestine, and liver were sampled and designated as the 0-h samples. The fish were then fed a single meal of the above four diets, and these tissues were collected at 8- and 24-h intervals after refeeding to analyze ciCD36 mRNA and protein expression levels. The results showed that at the transcriptional and translational levels, ciCD36 expression was significantly affected by refeeding time and the different diets (P energy in grass carp. Translational regulation might be responsible for the observed variations in ciCD36 expression.

  10. The structural basis for CD36 binding by the malaria parasite

    DEFF Research Database (Denmark)

    Hsieh, Fu-Lien; Turner, Louise; Bolla, Jani Reddy;

    2016-01-01

    allows the hugely diverse PfEMP1 protein family to bind to a conserved phenylalanine residue at the membrane distal tip of CD36. This phenylalanine is also required for CD36 to interact with lipoprotein particles. By targeting a site on CD36 that is required for its physiological function, PfEMP1...

  11. Uptake of long chain fatty acids is regulated by dynamic interaction of FAT/CD36 with cholesterol/sphingolipid enriched microdomains (lipid rafts

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    Herrmann Thomas

    2008-08-01

    Full Text Available Abstract Background Mechanisms of long chain fatty acid uptake across the plasma membrane are important targets in treatment of many human diseases like obesity or hepatic steatosis. Long chain fatty acid translocation is achieved by a concert of co-existing mechanisms. These lipids can passively diffuse, but certain membrane proteins can also accelerate the transport. However, we now can provide further evidence that not only proteins but also lipid microdomains play an important part in the regulation of the facilitated uptake process. Methods Dynamic association of FAT/CD36 a candidate fatty acid transporter with lipid rafts was analysed by isolation of detergent resistant membranes (DRMs and by clustering of lipid rafts with antibodies on living cells. Lipid raft integrity was modulated by cholesterol depletion using methyl-β-cyclodextrin and sphingolipid depletion using myriocin and sphingomyelinase. Functional analyses were performed using an [3H]-oleate uptake assay. Results Overexpression of FAT/CD36 and FATP4 increased long chain fatty acid uptake. The uptake of long chain fatty acids was cholesterol and sphingolipid dependent. Floating experiments showed that there are two pools of FAT/CD36, one found in DRMs and another outside of these domains. FAT/CD36 co-localized with the lipid raft marker PLAP in antibody-clustered domains at the plasma membrane and segregated away from the non-raft marker GFP-TMD. Antibody cross-linking increased DRM association of FAT/CD36 and accelerated the overall fatty acid uptake in a cholesterol dependent manner. Another candidate transporter, FATP4, was neither present in DRMs nor co-localized with FAT/CD36 at the plasma membrane. Conclusion Our observations suggest the existence of two pools of FAT/CD36 within cellular membranes. As increased raft association of FAT/CD36 leads to an increased fatty acid uptake, dynamic association of FAT/CD36 with lipid rafts might regulate the process. There is no

  12. [Establishment of method detecting CD36 expression on human platelet and its application].

    Science.gov (United States)

    Liu, Ying; Xu, Xian-Guo; Lan, Xiao-Fei; Ma, Kai-Rong; Chen, Shu; Hong, Xiao-Zhen; He, Ji; Zhu, Fa-Ming; Lyu, Hang-Jun

    2013-08-01

    The individual with the deficiency of CD36 antigen on platelet displayed the risk of anti-CD36 immune reaction induced by transfusion, which is one of the reasons for platelet transfusion refractoriness (PTR). This study was purposed to detect the expression level of CD36 antigen on platelet by flow cytometry among apheresis platelet donors of Hangzhou area, and the frequency of CD36 deficiency was analyzed. Platelet-rich plasma (PRP) was separated from fresh anticoagulant whole blood by centrifugation, then the platelets were washed and adjusted to 1×10(6). The platelets were incubated with FITC-labeled CD36 and PE-labeled CD41 monoclonal antibodies, then the expression level of CD36 was detected by flow cytometry. The CD36 expression on monocytes for the samples of CD36-deficiency on the platelets was further analyzed. The results showed that 7 samples with CD36 antigen deficiency were found in 192 apheresis platelet donors. The frequency of CD36 deficiency was 3.6% and all of them were typeII deficiency. The significant difference of CD36 antigen expression was observed in the platelet donors of Hangzhou population, among them 59 individuals with low expressed CD36 antigen and 126 individuals with highly expressed CD36 antigen were found according to the geometric mean fluorescence intensity. It is concluded that the CD36 antigen deficient phenotype existed in the population, these data will provide the information for research of the CD36 antigen distribution and help to solve the platelet transfusion refractoriness.

  13. Bone marrow chimeric mice reveal a dual role for CD36 in Plasmodium berghei ANKA infection

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    Febbraio Maria

    2007-03-01

    Full Text Available Abstract Background Adhesion of Plasmodium-infected red blood cells (iRBC to different host cells, ranging from endothelial to red blood cells, is associated to malaria pathology. In vitro studies have shown the relevance of CD36 for adhesion phenotypes of Plasmodium falciparum iRBC such as sequestration, platelet mediated clumping and non-opsonic uptake of iRBC. Different adhesion phenotypes involve different host cells and are associated with different pathological outcomes of disease. Studies with different human populations with CD36 polymorphisms failed to attribute a clear role to CD36 expression in human malaria. Up to the present, no in vivo model has been available to study the relevance of different CD36 adhesion phenotypes to the pathological course of Plasmodium infection. Methods Using CD36-deficient mice and their control littermates, CD36 bone marrow chimeric mice, expressing CD36 exclusively in haematopoietic cells or in non-haematopoietic cells, were generated. Irradiated CD36-/- and wild type mice were also reconstituted with syngeneic cells to control for the effects of irradiation. The reconstituted mice were infected with Plasmodium berghei ANKA and analysed for the development of blood parasitaemia and neurological symptoms. Results All mice reconstituted with syngeneic bone marrow cells as well as chimeric mice expressing CD36 exclusively in non-haematopoietic cells died from experimental cerebral malaria between day 6 and 12 after infection. A significant proportion of chimeric mice expressing CD36 only in haematopoietic cells did not die from cerebral malaria. Conclusion The analysis of bone marrow chimeric mice reveals a dual role of CD36 in P. berghei ANKA infection. Expression of CD36 in haematopoietic cells, most likely macrophages and dendritic cells, has a beneficial effect that is masked in normal mice by adverse effects of CD36 expression in non-haematopoietic cells, most likely endothelial cells.

  14. CD36 deficiency impairs the small intestinal barrier and induces subclinical inflammation in mice

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    Cifarelli, Vincenza; Ivanov, Stoyan; Xie, Yan; Son, Ni-Huiping; Saunders, Brian T.; Pietka, Terri A.; Shew, Trevor M.; Yoshino, Jun; Sundaresan, Sinju; Davidson, Nicholas O.; Goldberg, Ira J.; Gelman, Andrew E.; Zinselmeyer, Bernd H.; Randolph, Gwendalyn J.; Abumrad, Nada A.

    2016-01-01

    Background & Aims CD36 has immuno-metabolic actions and is abundant in the small intestine on epithelial, endothelial and immune cells. We examined the role of CD36 in gut homeostasis using mice null for CD36 (CD36KO) and with CD36 deletion specific to enterocytes (Ent-CD36KO) or endothelial cells (EC-CD36KO). Methods Intestinal morphology was evaluated using immunohistochemistry and electron microscopy (EM). Intestinal inflammation was determined from neutrophil infiltration and expression of cytokines, toll-like receptors and COX-2. Barrier integrity was assessed from circulating lipopolysaccharide (LPS) and dextran administered intragastrically. Epithelial permeability to luminal dextran was visualized using two photon microscopy. Results The small intestines of CD36KO mice fed a chow diet showed several abnormalities including extracellular matrix (ECM) accumulation with increased expression of ECM proteins, evidence of neutrophil infiltration, inflammation and compromised barrier function. EM showed shortened desmosomes with decreased desmocollin 2 expression. Systemically, leukocytosis and neutrophilia were present together with 80% reduction of anti-inflammatory Ly6Clow monocytes. Bone marrow transplants supported the primary contribution of non-hematopoietic cells to the inflammatory phenotype. Specific deletion of endothelial but not of enterocyte CD36 reproduced many of the gut phenotypes of germline CD36KO mice including fibronectin deposition, increased interleukin 6, neutrophil infiltration, desmosome shortening and impaired epithelial barrier function. Conclusions CD36 loss results in chronic neutrophil infiltration of the gut, impairs barrier integrity and systemically causes subclinical inflammation. Endothelial cell CD36 deletion reproduces the major intestinal phenotypes. The findings suggest an important role of the endothelium in etiology of gut inflammation and loss of epithelial barrier integrity. PMID:28066800

  15. Establishment of a cell line expressing the CD36 on human platelets and its application to the detec-tion of anti-CD36 antibodies%人血小板CD36转染细胞的建立及在CD36抗体检测中的应用

    Institute of Scientific and Technical Information of China (English)

    徐秀章; 刘静; 叶欣; Sentot Santoso; 夏文杰; 丁浩强; 陈大伟; 邓晶; 陈扬凯; 王嘉励; 邵媛

    2016-01-01

    Objective To establish a cell line stably expressing the human CD36 by using TA clo-ning and cell transfection technology and to analyze its application to the detection of anti-CD36 antibodies. Methods Total RNA was isolated from human platelets and then used to synthesize complementary DNA ( cDNA) . Sequence of the gene encoding CD36 on human platelets was obtained by PCR amplification. The recombinant vector was transformed into TOP10 E. coli after TA cloning. The positive recombinant pcDNA3. 1/V5-CD36 plasmid was screened out by blue-white selection and then sequenced. The correctly constructed plasmid coated with Effectene® Transfection Reagent was transferred into HEK293T cells. Fluo-rescence-activated cell sorting was performed to screen out the cell line that could stably express the CD36 on human platelets. The transfected cell line-based flow cytometry analysis and antibody capture assay ( ACA) were established and used for antibody detection in nine serum samples positive for anti-CD36 antibodies. Results The HEK293T cell line stably expressing the recombinant CD36 was successfully established. Compare with the monoclonal antibody immobilization of platelet antigens assay ( MAIPA) , anti-CD36 anti-bodies could be easily identified in nine serum samples by using the transfected cell line-based flow cytome-try analysis and ACA. Conclusion This study suggests that the HEK293T cells stably expressing the re-combinant CD36 could be used in flow cytometry analysis and ACA for the detection of anti-CD36 antibod-ies. It also paves the way for further researches on the mechanism of CD36 in other diseases.%目的:通过TA克隆和细胞转染技术建立稳定表达人CD36的转染细胞,并应用于CD36抗体检测。方法提取人血小板总RNA,逆转录为cDNA,经PCR扩增获得人血小板的CD36基因片段;TA克隆后转化TOP10 E. coli,蓝白斑筛选获得阳性重组子pcDNA3.1/V5-CD36,提取质粒DNA进行序列测定;将序列一致的质

  16. CD36 binds oxidized low density lipoprotein (LDL) in a mechanism dependent upon fatty acid binding.

    Science.gov (United States)

    Jay, Anthony G; Chen, Alexander N; Paz, Miguel A; Hung, Justin P; Hamilton, James A

    2015-02-20

    The association of unesterified fatty acid (FA) with the scavenger receptor CD36 has been actively researched, with focuses on FA and oxidized low density lipoprotein (oxLDL) uptake. CD36 has been shown to bind FA, but this interaction has been poorly characterized to date. To gain new insights into the physiological relevance of binding of FA to CD36, we characterized FA binding to the ectodomain of CD36 by the biophysical method surface plasmon resonance. Five structurally distinct FAs (saturated, monounsaturated (cis and trans), polyunsaturated, and oxidized) were pulsed across surface plasmon resonance channels, generating association and dissociation binding curves. Except for the oxidized FA HODE, all FAs bound to CD36, with rapid association and dissociation kinetics similar to HSA. Next, to elucidate the role that each FA might play in CD36-mediated oxLDL uptake, we used a fluorescent oxLDL (Dii-oxLDL) live cell assay with confocal microscopy imaging. CD36-mediated uptake in serum-free medium was very low but greatly increased when serum was present. The addition of exogenous FA in serum-free medium increased oxLDL binding and uptake to levels found with serum and affected CD36 plasma membrane distribution. Binding/uptake of oxLDL was dependent upon the FA dose, except for docosahexaenoic acid, which exhibited binding to CD36 but did not activate the uptake of oxLDL. HODE also did not affect oxLDL uptake. High affinity FA binding to CD36 and the effects of each FA on oxLDL uptake have important implications for protein conformation, binding of other ligands, functional properties of CD36, and high plasma FA levels in obesity and type 2 diabetes.

  17. Low CD36 and LOX-1 Levels and CD36 Gene Subexpression Are Associated with Metabolic Dysregulation in Older Individuals with Abdominal Obesity

    Science.gov (United States)

    Castro-Albarran, Jorge; Sandoval-García, Flavio; Flores-Alvarado, Luis-Javier

    2016-01-01

    Background. Obesity study in the context of scavenger receptors has been linked to atherosclerosis. CD36 and LOX-1 are important, since they have been associated with atherogenic and metabolic disease but not fat redistribution. The aim of our study was to determinate the association between CD36 and LOX-1 in presence of age and abdominal obesity. Methods. This is a cross-sectional study that included 151 healthy individuals, clinically and anthropometrically classified into two groups by age (<30 and ≥30 years old) and abdominal obesity (according to World Health Organization guidelines). We excluded individuals with any chronic and metabolic illness, use of medication, or smoking. Fasting blood samples were taken to perform determination of CD36 mRNA expression by real-time PCR, lipid profile and metabolic and low grade inflammation markers by routine methods, and soluble scavenger receptors (CD36 and LOX-1) by ELISA. Results. Individuals ≥30 years old with abdominal obesity presented high atherogenic index, lower soluble scavenger receptor levels, and subexpression of CD36 mRNA (54% less). On the other hand, individuals <30 years old with abdominal adiposity presented higher levels in the same parameters, except LOX-1 soluble levels. Conclusion. In this study, individuals over 30 years of age presented low soluble scavenger receptors levels pattern and CD36 gene subexpression, which suggest the chronic metabolic dysregulation in abdominal obesity. PMID:27525284

  18. Low CD36 and LOX-1 Levels and CD36 Gene Subexpression Are Associated with Metabolic Dysregulation in Older Individuals with Abdominal Obesity

    Directory of Open Access Journals (Sweden)

    Perla-Monserrat Madrigal-Ruíz

    2016-01-01

    Full Text Available Background. Obesity study in the context of scavenger receptors has been linked to atherosclerosis. CD36 and LOX-1 are important, since they have been associated with atherogenic and metabolic disease but not fat redistribution. The aim of our study was to determinate the association between CD36 and LOX-1 in presence of age and abdominal obesity. Methods. This is a cross-sectional study that included 151 healthy individuals, clinically and anthropometrically classified into two groups by age (<30 and ≥30 years old and abdominal obesity (according to World Health Organization guidelines. We excluded individuals with any chronic and metabolic illness, use of medication, or smoking. Fasting blood samples were taken to perform determination of CD36 mRNA expression by real-time PCR, lipid profile and metabolic and low grade inflammation markers by routine methods, and soluble scavenger receptors (CD36 and LOX-1 by ELISA. Results. Individuals ≥30 years old with abdominal obesity presented high atherogenic index, lower soluble scavenger receptor levels, and subexpression of CD36 mRNA (54% less. On the other hand, individuals <30 years old with abdominal adiposity presented higher levels in the same parameters, except LOX-1 soluble levels. Conclusion. In this study, individuals over 30 years of age presented low soluble scavenger receptors levels pattern and CD36 gene subexpression, which suggest the chronic metabolic dysregulation in abdominal obesity.

  19. [Scavenger receptor CD36: its expression, regulation, and role in the pathogenesis of atherosclerosis. Part I].

    Science.gov (United States)

    Kuliczkowska-Płaksej, Justyna; Bednarek-Tupikowska, Grazyna; Płaksej, Rafał; Filus, Alicja

    2006-01-01

    Atherosclerosis is a progressive pathological process based on endothelial dysfunction and chronic inflammation. Monocytes, macrophages, and modified lipoproteins, especially oxidized LDLs (oxLDLs), play a fundamental role in the pathogenesis of atherosclerosis. Monocytes evolve into macrophages in the vascular wall and then accumulate oxLDLs, forming foam cells. OxLDLs are toxic and activate foam cells, stimulate the replication of macrophages and their migration into atherosclerotic plaque, and increase the expression of metaloproteinases. Macrophages bind oxLDLs through many types of receptors, among them scavenger receptors. One of these is CD36, a membrane glycoprotein expressed by endothelial cells, adipocytes, smooth and skeletal muscle cells, cardiomiocytes, platelets, monocytes, and macrophages. CD36 recognizes and binds many ligands, such as oxLDLs, long-chain fatty acids, collagen, thrombospondin 1, apoptotic cells, anionic phospholipids, and Plasmodium falciparum-infected erythrocytes. CD36 is involved in many processes, e.g. inner immune system responses, removal of apoptotic cells and Plasmodium falciparum-infected erythrocytes, and the transport of long-chain fatty acids, and it also mediates collagen and thrombospondin action. Recent reports indicate that CD36 may play a role in the development of atherosclerosis. An animal model revealed that lack of CD36 expression restrains atheroslerosis. Increased expression of CD36 was shown in atheroslerotic plaque and damaged vascular tissue. Contradictory data about the effects of antiatherosclerotic drugs on CD36 expression indicate the necessity for further investigation of the role of CD36 in the development of atherosclerosis.

  20. Contraction-induced skeletal muscle FAT/CD36 trafficking and FA uptake is AMPK independent

    DEFF Research Database (Denmark)

    Jeppesen, Jacob; Albers, Peter Hjorth; Rose, Adam John

    2011-01-01

    translocation and fatty acid uptake in response to muscle contractions was investigated in the perfused rat hindlimb. Exercise induced a similar increase in skeletal muscle cell surface membrane FAT/CD36 content in WT (+34%) and AMPK KD (+37%) mice. In contrast, AICAR only induced an increase in cell surface...... FAT/CD36 content in WT (+29%) mice. Furthermore, in the perfused rat hindlimb, muscle contraction induced a rapid (1 min, +15%) and sustained (10 min, +24%) FAT/CD36 relocation to cell surface membranes. The increase in cell surface FAT/CD36 protein content with muscle contractions associated...... with increased fatty acid uptake, both in EDL and SOL muscle from WT and AMPK KD mice and in the perfused rat hindlimb. This suggests that AMPK is not essential in regulation of FAT/CD36 translocation and fatty acid uptake in skeletal muscle during contractions. However, AMPK could be important in regulation...

  1. The Anti-TNF-α Antibody Infliximab Inhibits the Expression of Fat-Transporter-Protein FAT/CD36 in a Selective Hepatic-Radiation Mouse Model

    Directory of Open Access Journals (Sweden)

    Gesa Martius

    2015-03-01

    Full Text Available Previously, we reported a radiation-induced inflammation triggering fat-accumulation through fatty-acid-translocase/cluster of differentiation protein 36 (FAT/CD36 in rat liver. Furthermore, inhibition of radiation-induced FAT/CD36-expression by anti-tumor necrosis factor-α (anti-TNF-α (infliximab was shown in vitro. The current study investigates fat-accumulation in a mouse-model of single-dose liver-irradiation (25-Gray and the effect of anti-TNF-α-therapy on FAT/CD36 gene-expression. Mice livers were selectively irradiated in vivo in presence or absence of infliximab. Serum- and hepatic-triglycerides, mRNA, and protein were analyzed by colorimetric assays, RT-PCR, Immunofluorescence and Western-Blot, respectively. Sudan-staining was used demonstrating fat-accumulation in tissue. In mice livers, early (1–3 h induction of TNF-α-expression, a pro-inflammatory cytokine, was observed. It was followed by elevated hepatic-triglyceride level (6–12 h, compared to sham-irradiated controls. In contrast, serum-triglyceride level was decreased at these time points. Similar to triglyceride level in mice livers, Sudan staining of liver cryosections showed a quick (6–12 h increase of fat-droplets after irradiation. Furthermore, expression of fat-transporter-protein FAT/CD36 was increased at protein level caused by radiation or TNF-α. TNF-α-blockage by anti-TNF-α showed an early inhibition of radiation-induced FAT/CD36 expression in mice livers. Immunohistochemistry showed basolateral and cytoplasmic expression of FAT/CD36 in hepatocytes. Moreover, co-localization of FAT/CD36 was detected with α-smooth muscle actin (α-SMA+ cells and F4/80+ macrophages. In summary, hepatic-radiation triggers fat-accumulation in mice livers, involving acute-phase-processes. Accordingly, anti-TNF-α-therapy prevented early radiation-induced expression of FAT/CD36 in vivo.

  2. The anti-TNF-α antibody infliximab inhibits the expression of fat-transporter-protein FAT/CD36 in a selective hepatic-radiation mouse model.

    Science.gov (United States)

    Martius, Gesa; Cameron, Silke; Rave-Fränk, Margret; Hess, Clemens F; Wolff, Hendrik A; Malik, Ihtzaz A

    2015-03-02

    Previously, we reported a radiation-induced inflammation triggering fat-accumulation through fatty-acid-translocase/cluster of differentiation protein 36 (FAT/CD36) in rat liver. Furthermore, inhibition of radiation-induced FAT/CD36-expression by anti-tumor necrosis factor-α (anti-TNF-α) (infliximab) was shown in vitro. The current study investigates fat-accumulation in a mouse-model of single-dose liver-irradiation (25-Gray) and the effect of anti-TNF-α-therapy on FAT/CD36 gene-expression. Mice livers were selectively irradiated in vivo in presence or absence of infliximab. Serum- and hepatic-triglycerides, mRNA, and protein were analyzed by colorimetric assays, RT-PCR, Immunofluorescence and Western-Blot, respectively. Sudan-staining was used demonstrating fat-accumulation in tissue. In mice livers, early (1-3 h) induction of TNF-α-expression, a pro-inflammatory cytokine, was observed. It was followed by elevated hepatic-triglyceride level (6-12 h), compared to sham-irradiated controls. In contrast, serum-triglyceride level was decreased at these time points. Similar to triglyceride level in mice livers, Sudan staining of liver cryosections showed a quick (6-12 h) increase of fat-droplets after irradiation. Furthermore, expression of fat-transporter-protein FAT/CD36 was increased at protein level caused by radiation or TNF-α. TNF-α-blockage by anti-TNF-α showed an early inhibition of radiation-induced FAT/CD36 expression in mice livers. Immunohistochemistry showed basolateral and cytoplasmic expression of FAT/CD36 in hepatocytes. Moreover, co-localization of FAT/CD36 was detected with α-smooth muscle actin (α-SMA+) cells and F4/80+ macrophages. In summary, hepatic-radiation triggers fat-accumulation in mice livers, involving acute-phase-processes. Accordingly, anti-TNF-α-therapy prevented early radiation-induced expression of FAT/CD36 in vivo.

  3. CD36 deficiency leads to choroidal involution via COX2 down-regulation in rodents.

    Directory of Open Access Journals (Sweden)

    Marianne Houssier

    2008-02-01

    Full Text Available BACKGROUND: In the Western world, a major cause of blindness is age-related macular degeneration (AMD. Recent research in angiogenesis has furthered the understanding of choroidal neovascularization, which occurs in the "wet" form of AMD. In contrast, very little is known about the mechanisms of the predominant, "dry" form of AMD, which is characterized by retinal atrophy and choroidal involution. The aim of this study is to elucidate the possible implication of the scavenger receptor CD36 in retinal degeneration and choroidal involution, the cardinal features of the dry form of AMD. METHODS AND FINDINGS: We here show that deficiency of CD36, which participates in outer segment (OS phagocytosis by the retinal pigment epithelium (RPE in vitro, leads to significant progressive age-related photoreceptor degeneration evaluated histologically at different ages in two rodent models of CD36 invalidation in vivo (Spontaneous hypertensive rats (SHR and CD36-/- mice. Furthermore, these animals developed significant age related choroidal involution reflected in a 100%-300% increase in the avascular area of the choriocapillaries measured on vascular corrosion casts of aged animals. We also show that proangiogenic COX2 expression in RPE is stimulated by CD36 activating antibody and that CD36-deficient RPE cells from SHR rats fail to induce COX2 and subsequent vascular endothelial growth factor (VEGF expression upon OS or antibody stimulation in vitro. CD36-/- mice express reduced levels of COX2 and VEGF in vivo, and COX2-/- mice develop progressive choroidal degeneration similar to what is seen in CD36 deficiency. CONCLUSIONS: CD36 deficiency leads to choroidal involution via COX2 down-regulation in the RPE. These results show a novel molecular mechanism of choroidal degeneration, a key feature of dry AMD. These findings unveil a pathogenic process, to our knowledge previously undescribed, with important implications for the development of new therapies.

  4. CD36 is indispensable for thermogenesis under conditions of fasting and cold stress

    Energy Technology Data Exchange (ETDEWEB)

    Putri, Mirasari [Department of Medicine and Biological Science, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Department of Public Health, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Syamsunarno, Mas Rizky A.A. [Department of Medicine and Biological Science, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Department of Biochemistry, Universitas Padjadjaran, Jl. Raya Bandung Sumedang KM 21, Jatinangor, West Java 45363 (Indonesia); Iso, Tatsuya, E-mail: isot@gunma-u.ac.jp [Department of Medicine and Biological Science, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Education and Research Support Center, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Yamaguchi, Aiko; Hanaoka, Hirofumi [Department of Bioimaging Information Analysis, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Sunaga, Hiroaki [Department of Laboratory Sciences, Gunma University Graduate School of Health Sciences, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Koitabashi, Norimichi [Department of Medicine and Biological Science, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Matsui, Hiroki [Department of Laboratory Sciences, Gunma University Graduate School of Health Sciences, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Yamazaki, Chiho; Kameo, Satomi [Department of Public Health, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); Tsushima, Yoshito [Department of Diagnostic Radiology and Nuclear Medicine, Gunma University Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511 (Japan); and others

    2015-02-20

    Hypothermia can occur during fasting when thermoregulatory mechanisms, involving fatty acid (FA) utilization, are disturbed. CD36/FA translocase is a membrane protein which facilitates membrane transport of long-chain FA in the FA consuming heart, skeletal muscle (SkM) and adipose tissues. It also accelerates uptake of triglyceride-rich lipoprotein by brown adipose tissue (BAT) in a cold environment. In mice deficient for CD36 (CD36{sup −/−} mice), FA uptake is markedly reduced with a compensatory increase in glucose uptake in the heart and SkM, resulting in lower levels of blood glucose especially during fasting. However, the role of CD36 in thermogenic activity during fasting remains to be determined. In fasted CD36{sup −/−} mice, body temperature drastically decreased shortly after cold exposure. The hypothermia was accompanied by a marked reduction in blood glucose and in stores of triacylglycerols in BAT and of glycogen in glycolytic SkM. Biodistribution analysis using the FA analogue {sup 125}I-BMIPP and the glucose analogue {sup 18}F-FDG revealed that uptake of FA and glucose was severely impaired in BAT and glycolytic SkM in cold-exposed CD36{sup −/−} mice. Further, induction of the genes of thermogenesis in BAT was blunted in fasted CD36{sup −/−} mice after cold exposure. These findings strongly suggest that CD36{sup −/−} mice exhibit pronounced hypothermia after fasting due to depletion of energy storage in BAT and glycolytic SkM and to reduced supply of energy substrates to these tissues. Our study underscores the importance of CD36 for nutrient homeostasis to survive potentially life-threatening challenges, such as cold and starvation. - Highlights: • We examined the role of CD36 in thermogenesis during cold exposure. • CD36{sup −/−} mice exhibit rapid hypothermia after cold exposure during fasting. • Uptake of fatty acid and glucose is impaired in thermogenic tissues during fasting. • Storage of energy substrates is

  5. Enhanced hepatic apoA-I secretion and peripheral efflux of cholesterol and phospholipid in CD36 null mice.

    Directory of Open Access Journals (Sweden)

    Pin Yue

    Full Text Available CD36 facilitates oxidized low density lipoprotein uptake and is implicated in development of atherosclerotic lesions. CD36 also binds unmodified high and very low density lipoproteins (HDL, VLDL but its role in the metabolism of these particles is unclear. Several polymorphisms in the CD36 gene were recently shown to associate with serum HDL cholesterol. To gain insight into potential mechanisms for these associations we examined HDL metabolism in CD36 null (CD36(-/- mice. Feeding CD36(-/- mice a high cholesterol diet significantly increased serum HDL, cholesterol and phospholipids, as compared to wild type mice. HDL apolipoproteins apoA-I and apoA-IV were increased and shifted to higher density HDL fractions suggesting altered particle maturation. Clearance of dual-labeled HDL was unchanged in CD36(-/- mice and cholesterol uptake from HDL or LDL by isolated CD36(-/- hepatocytes was unaltered. However, CD36(-/- hepatocytes had higher cholesterol and phospholipid efflux rates. In addition, expression and secretion of apoA-I and apoA-IV were increased reflecting enhanced PXR. Similar to hepatocytes, cholesterol and phospholipid efflux were enhanced in CD36(-/- macrophages without changes in protein levels of ABCA1, ABCG1 or SR-B1. However, biotinylation assays showed increased surface ABCA1 localization in CD36(-/- cells. In conclusion, CD36 influences reverse cholesterol transport and hepatic ApoA-I production. Both pathways are enhanced in CD36 deficiency, increasing HDL concentrations, which suggests the potential benefit of CD36 inhibition.

  6. Palmitic acid interferes with energy metabolism balance by adversely switching the SIRT1-CD36-fatty acid pathway to the PKC zeta-GLUT4-glucose pathway in cardiomyoblasts.

    Science.gov (United States)

    Chen, Yeh-Peng; Tsai, Chia-Wen; Shen, Chia-Yao; Day, Cecilia-Hsuan; Yeh, Yu-Lan; Chen, Ray-Jade; Ho, Tsung-Jung; Padma, V Vijaya; Kuo, Wei-Wen; Huang, Chih-Yang

    2016-05-01

    Metabolic regulation is inextricably linked with cardiac function. Fatty acid metabolism is a significant mechanism for creating energy for the heart. However, cardiomyocytes are able to switch the fatty acids or glucose, depending on different situations, such as ischemia or anoxia. Lipotoxicity in obesity causes impairments in energy metabolism and apoptosis in cardiomyocytes. We utilized the treatment of H9c2 cardiomyoblast cells palmitic acid (PA) as a model for hyperlipidemia to investigate the signaling mechanisms involved in these processes. Our results show PA induces time- and dose-dependent lipotoxicity in H9c2 cells. Moreover, PA enhances cluster of differentiation 36 (CD36) and reduces glucose transporter type 4 (GLUT4) pathway protein levels following a short period of treatment, but cells switch from CD36 back to the GLUT4 pathway after during long-term exposure to PA. As sirtuin 1 (SIRT1) and protein kinase Cζ (PKCζ) play important roles in CD36 and GLUT4 translocation, we used the SIRT1 activator resveratrol and si-PKCζ to identify the switches in metabolism. Although PA reduced CD36 and increased GLUT4 metabolic pathway proteins, when we pretreated cells with resveratrol to activate SIRT1 or transfected si-PKCζ, both were able to significantly increase CD36 metabolic pathway proteins and reduce GLUT4 pathway proteins. High-fat diets affect energy metabolism pathways in both normal and aging rats and involve switching the energy source from the CD36 pathway to GLUT4. In conclusion, PA and high-fat diets cause lipotoxicity in vivo and in vitro and adversely switch the energy source from the CD36 pathway to the GLUT4 pathway.

  7. Deregulated Lipid Sensing by Intestinal CD36 in Diet-Induced Hyperinsulinemic Obese Mouse Model

    Science.gov (United States)

    Buttet, Marjorie; Poirier, Hélène; Traynard, Véronique; Gaire, Kévin; Tran, Thi Thu Trang; Sundaresan, Sinju; Besnard, Philippe; Abumrad, Nada A.; Niot, Isabelle

    2016-01-01

    The metabolic syndrome (MetS) greatly increases risk of cardiovascular disease and diabetes and is generally associated with abnormally elevated postprandial triglyceride levels. We evaluated intestinal synthesis of triglyceride-rich lipoproteins (TRL) in a mouse model of the MetS obtained by feeding a palm oil-rich high fat diet (HFD). By contrast to control mice, MetS mice secreted two populations of TRL. If the smaller size population represented 44% of total particles in the beginning of intestinal lipid absorption in MetS mice, it accounted for only 17% after 4 h due to the secretion of larger size TRL. The MetS mice displayed accentuated postprandial hypertriglyceridemia up to 3 h due to a defective TRL clearance. These alterations reflected a delay in lipid induction of genes for key proteins of TRL formation (MTP, L-FABP) and blood clearance (ApoC2). These abnormalities associated with blunted lipid sensing by CD36, which is normally required to optimize jejunal formation of large TRL. In MetS mice CD36 was not downregulated by lipid in contrast to control mice. Treatment of controls with the proteosomal inhibitor MG132, which prevented CD36 downregulation, resulted in blunted lipid-induction of MTP, L-FABP and ApoC2 gene expression, as in MetS mice. Absence of CD36 sensing was due to the hyperinsulinemia in MetS mice. Acute insulin treatment of controls before lipid administration abolished CD36 downregulation, lipid-induction of TRL genes and reduced postprandial triglycerides (TG), while streptozotocin-treatment of MetS mice restored lipid-induced CD36 degradation and TG secretion. In vitro, insulin treatment abolished CD36-mediated up-regulation of MTP in Caco-2 cells. In conclusion, HFD treatment impairs TRL formation in early stage of lipid absorption via insulin-mediated inhibition of CD36 lipid sensing. This impairment results in production of smaller TRL that are cleared slowly from the circulation, which might contribute to the reported

  8. Deregulated Lipid Sensing by Intestinal CD36 in Diet-Induced Hyperinsulinemic Obese Mouse Model.

    Directory of Open Access Journals (Sweden)

    Marjorie Buttet

    Full Text Available The metabolic syndrome (MetS greatly increases risk of cardiovascular disease and diabetes and is generally associated with abnormally elevated postprandial triglyceride levels. We evaluated intestinal synthesis of triglyceride-rich lipoproteins (TRL in a mouse model of the MetS obtained by feeding a palm oil-rich high fat diet (HFD. By contrast to control mice, MetS mice secreted two populations of TRL. If the smaller size population represented 44% of total particles in the beginning of intestinal lipid absorption in MetS mice, it accounted for only 17% after 4 h due to the secretion of larger size TRL. The MetS mice displayed accentuated postprandial hypertriglyceridemia up to 3 h due to a defective TRL clearance. These alterations reflected a delay in lipid induction of genes for key proteins of TRL formation (MTP, L-FABP and blood clearance (ApoC2. These abnormalities associated with blunted lipid sensing by CD36, which is normally required to optimize jejunal formation of large TRL. In MetS mice CD36 was not downregulated by lipid in contrast to control mice. Treatment of controls with the proteosomal inhibitor MG132, which prevented CD36 downregulation, resulted in blunted lipid-induction of MTP, L-FABP and ApoC2 gene expression, as in MetS mice. Absence of CD36 sensing was due to the hyperinsulinemia in MetS mice. Acute insulin treatment of controls before lipid administration abolished CD36 downregulation, lipid-induction of TRL genes and reduced postprandial triglycerides (TG, while streptozotocin-treatment of MetS mice restored lipid-induced CD36 degradation and TG secretion. In vitro, insulin treatment abolished CD36-mediated up-regulation of MTP in Caco-2 cells. In conclusion, HFD treatment impairs TRL formation in early stage of lipid absorption via insulin-mediated inhibition of CD36 lipid sensing. This impairment results in production of smaller TRL that are cleared slowly from the circulation, which might contribute to the

  9. The macrophage Ox-LDL receptor, CD36 and its association with type II diabetes mellitus.

    Science.gov (United States)

    Gautam, Sunaina; Banerjee, Monisha

    2011-04-01

    Type II diabetes mellitus (T2DM) is a common and serious metabolic disorder worldwide. It is the third leading cause of death after cancer and cardiovascular disease (CVD). Over time, diabetes mellitus can lead to different complications like atherosclerosis, coronary heart disease and many micro- and macrovascular diseases. CD36 is a class B scavenger receptor whose expression is prevalent in vascular lesions. It has been shown that high plasma low density lipoprotein (LDL) levels become atherogenic when oxidized to modified LDL (Ox-LDL) by inducing foam cell formation via enhanced CD36 expression on macrophages. In addition to Ox-LDL, raised levels of glucose, insulin resistance, low HDL cholesterol, increased levels of free fatty acid (FFA) all result in increased expression of CD36, thereby contributing to T2DM and related atherosclerosis. Adipocytokines such as tumor necrosis factor-alpha (TNF-α), C-reactive protein (CRP), adiponectin, leptin, resistin along with peroxisome proliferator activated receptor-γ (PPAR-γ) are important mediators in glucose homeostasis in association with CD36 and can be used as markers for T2DM and atherosclerosis. Several of these gene variants have shown association with lipid metabolism, T2DM and related complications. An attempt has been made to review the CD36 macrophage receptor and related molecules in association with T2DM.

  10. Refractory platelet transfusion in a patient with CD36 deficiency due to pseudothrombocytopenia.

    Science.gov (United States)

    Yin, Xiao-Lin; Shen, Wei-Dong; Chen, Yong-Sheng; Zhou, Yan; Zhang, Xin-Huan

    2011-01-01

    Type I CD36 deficiency is defined by the absence of CD36 on both platelets and monocytes. Pseudothrombocytopenia (PTCP) is characterized by a false reduction in the number of platelets in ethylenediaminetetraacetic acid (EDTA)-anticoagulated blood. Here we report a rare case of concomitant CD36 deficiency and PTCP. The patient was a 7-year-old boy who suffered comminuted fractures of the left humeral condyle. In the pre-operative examination, he was found to have thrombopenia and assumed to have idiopathic thrombocytopenic purpura. After immunotherapy and platelet transfusion, the platelet count remained low, suggesting that the patient was refractory to platelet transfusion. Serum was collected for the detection of platelet antibodies, and antibodies against CD36 were found. Flow cytometry verified the absence of CD36 on both the platelets and monocytes of this patient. However, the platelet count was normal when capillary blood smears were analysed; in addition, platelet coagulation was noted under the microscope when EDTA-anticoagulated peripheral blood was used. The patient underwent surgery without platelet transfusion and recovered uneventfully.

  11. Mechanism linking atherosclerosis and type 2 diabetes: increased expression of scavenger receptor CD36 in monocytes

    Institute of Scientific and Technical Information of China (English)

    ZHANG Hong-mei; ZHANG Xiao-lian; ZHOU Xin; LI Dong; GU Jin-gang; WU Juan-juan

    2005-01-01

    Background We investigated the pathogenesis of atherosclerosis in diabetes, and detected the expression of scavenger receptor CD36 in monocytes in patients with type 2 diabetes.Methods According to the criteria by WHO, diabetic patients were classified into two groups: well controlled diabetic patients (WCP) and poorly controlled diabetic patients (PCP). The expression of CD36 protein and mRNA were evaluated by flow cytometry and reversal transcription polymerase chain reaction (RT-PCR). Plasma levels of accumulution of oxidized LDL (oxLDL) were directly measured by sandwich enzyme-linked immunosorbent assay (ELISA) method.Results Flow cytometry and RT-PCR showed that the mean fluorescence intensity (MFI) of CD36 in monocyte and CD36 mRNA were significantly higher in the PCP and WCP in comparison with healthy controls (P0.05). The concentrations of plasma oxLDL were higher in the PCP group compared to WCP and control group (P0.05). In the WCP and PCP groups, oxLDL levels were higher in patients with diabetic atherosclerosis than those without diabetic atherosclerosis (P<0.05).Conclusions The increased expression of scavenger receptor CD36 may be one of the mechanism of accelerated atherosclerosis in diabetic. The poorly controlled diabetes patients are at higher risk for the vascular complications than the well controlled diabetic patients.

  12. HIV-1 Nef impairs key functional activities in human macrophages through CD36 downregulation.

    Directory of Open Access Journals (Sweden)

    Eleonora Olivetta

    Full Text Available Monocytes and macrophages utilize the class A and B scavenger receptors to recognize and perform phagocytosis of invading microbes before a pathogen-specific immune response is generated. HIV-1 Nef protein affects the innate immune system impairing oxidative burst response and phagocytic capacity of macrophages. Our data show that exogenous recombinant myristoylated Nef protein induces a marked CD36 downregulation in monocytes from Peripheral Blood Mononuclear Cells, in Monocyte-Derived Macrophages (MDMs differentiated by cytokines and in MDMs contained in a mixed culture obtained expanding PBMCs under Human Erythroid Massive Amplification condition. Under the latter culture condition we identify three main populations after 6 days of expansion: lymphocytes (37.8 ± 14.7%, erythroblasts (46.7±6.1% and MDMs (15.7 ± 7.5%. The Nef addition to the cell culture significantly downregulates CD36 expression in MDMs, but not in erythroid cells. Furthermore, CD36 inhibition is highly specific since it does not modify the expression levels of other MDM markers such as CD14, CD11c, CD86, CD68, CD206, Toll-like Receptor 2 and Toll-like Receptor 4. Similar results were obtained in MDMs infected with VSV-G pseudotyped HIV-1-expressing Nef. The reduced CD36 membrane expression is associated with decrease of correspondent CD36 mRNA transcript. Furthermore, Nef-induced CD36 downregulation is linked to both impaired scavenger activity with reduced capability to take up oxidized lipoproteins and to significant decreased phagocytosis of fluorescent beads and GFP-expressing Salmonella tiphymurium. In addition we observed that Nef induces TNF-α release in MDMs. Although these data suggest a possible involvement of TNF-α in mediating Nef activity, our results exclude a possible relationship between Nef-induced TNF-α release and Nef-mediated CD36 downregulation. The present work shows that HIV-1 Nef protein may have a role in the strategies elaborated by HIV-1 to

  13. Increased hepatic CD36 expression with age is associated with enhanced susceptibility to nonalcoholic fatty liver disease

    Science.gov (United States)

    Sheedfar, Fareeba; Sung, Miranda MY; Aparicio-Vergara, Marcela; Kloosterhuis, Niels J; Miquilena-Colina, Maria Eugenia; Vargas-Castrillón, Javier; Febbraio, Maria; Jacobs, René L; de Bruin, Alain; Vinciguerra, Manlio; García-Monzón, Carmelo; Hofker, Marten H; Dyck, Jason RB; Koonen, Debby PY

    2014-01-01

    CD36 has been associated with obesity and diabetes in human liver diseases, however, its role in age-associated nonalcoholic fatty liver disease (NAFLD) is unknown. Therefore, liver biopsies were collected from individuals with histologically normal livers (n=30), and from patients diagnosed with simple steatosis (NAS; n=26). Patients were divided into two groups according to age and liver biopsy samples were immunostained for CD36. NAFLD parameters were examined in young (12-week) and middle-aged (52-week) C57BL/6J mice, some fed with chow-diet and some fed with low-fat (LFD; 10% kcal fat) or high-fat diet (HFD; 60% kcal fat) for 12-weeks. CD36 expression was positively associated with age in individuals with normal livers but not in NAS patients. However, CD36 was predominantly located at the plasma membrane of hepatocytes in aged NAS patients as compared to young. In chow-fed mice, aging, despite an increase in hepatic CD36 expression, was not associated with the development of NAFLD. However, middle-aged mice did exhibit the development of HFD-induced NAFLD, mediated by an increase of CD36 on the membrane. Enhanced CD36-mediated hepatic fat uptake may contribute to an accelerated progression of NAFLD in mice and humans. Therapies to prevent the increase in CD36 expression and/or CD36 from anchoring at the membrane may prevent the development of NAFLD. PMID:24751397

  14. Oxidized LDL Induces Alternative Macrophage Phenotype through Activation of CD36 and PAFR

    Directory of Open Access Journals (Sweden)

    Francisco J. Rios

    2013-01-01

    Full Text Available OxLDL is recognized by macrophage scavenger receptors, including CD36; we have recently found that Platelet-Activating Factor Receptor (PAFR is also involved. Since PAFR in macrophages is associated with suppressor function, we examined the effect of oxLDL on macrophage phenotype. It was found that the presence of oxLDL during macrophage differentiation induced high mRNA levels to IL-10, mannose receptor, PPARγ and arginase-1 and low levels of IL-12 and iNOS. When human THP-1 macrophages were pre-treated with oxLDL then stimulated with LPS, the production of IL-10 and TGF-β significantly increased, whereas that of IL-6 and IL-8 decreased. In murine TG-elicited macrophages, this protocol significantly reduced NO, iNOS and COX2 expression. Thus, oxLDL induced macrophage differentiation and activation towards the alternatively activated M2-phenotype. In murine macrophages, oxLDL induced TGF-β, arginase-1 and IL-10 mRNA expression, which were significantly reduced by pre-treatment with PAFR antagonists (WEB and CV or with antibodies to CD36. The mRNA expression of IL-12, RANTES and CXCL2 were not affected. We showed that this profile of macrophage activation is dependent on the engagement of both CD36 and PAFR. We conclude that oxLDL induces alternative macrophage activation by mechanisms involving CD36 and PAFR.

  15. The structural basis for CD36 binding by the malaria parasite

    DEFF Research Database (Denmark)

    Hsieh, Fu-Lien; Turner, Louise; Bolla, Jani Reddy;

    2016-01-01

    CD36 is a scavenger receptor involved in fatty acid metabolism, innate immunity and angiogenesis. It interacts with lipoprotein particles and facilitates uptake of long chain fatty acids. It is also the most common target of the PfEMP1 proteins of the malaria parasite, Plasmodium falciparum...

  16. CD36 expression and lipid metabolism following an oralglucose challenge in South Asians

    Institute of Scientific and Technical Information of China (English)

    2015-01-01

    AIM To investigate lipid metabolism and the relationshipwith monocyte expression of the fatty acid translocaseCD36 in South Asians.METHODS: An observational study of South Asianswhom as an ethnic group have - a higher risk ofdeveloping diabetes. The susceptibility to diabetes iscoupled with an earlier and more rapid progressionof micro-, and macro-vascular complications. Twentyninehealthy South Asian participants [mean age 34.6(8.9) years, 76.2% male, mean body-mass index 25.0(5.2) kg/m2] were recruited from an urban residentialarea of central Birmingham (United Kingdom). Themain outcomes measured were post prandial (30 min)and post absorptive (120 min) changes from fasting (0min) in circulating lipoproteins, lipds and hormones, and monocyte expression of CD36 post injection of a 75 goral glucose challenge. The inducements of variations ofmonocyte CD36 expression were analysed.RESULTS: Our results showed evident changes inmonocyte CD36 expression following the glucosechallenge (P 〈 0.001). Non-esterified fatty acids (NEFA)levels decreased progressively during the challenge(P 〈 0.001), in contrast to increased cholesterol(but not triglyceride) concentrations within very lowdensity lipoprotein (VLDL) and low density lipoproteinsubfractions (P 〈 0.01). Levels of, glucose, serumtriglycerides and high density lipoprotein cholesterolremained largely unchanged. Variations of monocyteCD36 were negatively (r = -0.47, P = 0.04) associatedto fat from the diet and positively to carbohydrate fromthe diet (r = 0.65, P 〈 0.001).CONCLUSION: These data suggest that the initiationof VLDL genesis follows the consumption of glucosewithin this population, inferring that the sequestrationof NEFA from these particles happens due to theincreased availability of CD36 receptors. While theseare preliminary results, it would appear that lifestyleexposures have a role in moderating the expression ofCD36.

  17. CD36 Is Essential for Regulation of the Host Innate Response to Staphylococcus aureus α-Toxin-Mediated Dermonecrosis.

    Science.gov (United States)

    Castleman, Moriah J; Febbraio, Maria; Hall, Pamela R

    2015-09-01

    Staphylococcus aureus is the primary cause of skin and skin structure infections (SSSIs) in the United States. α-Hemolysin (Hla), a pore-forming toxin secreted by S. aureus and a major contributor to tissue necrosis, prompts recruitment of neutrophils critical for host defense against S. aureus infections. However, the failure to clear apoptotic neutrophils can result in damage to host tissues, suggesting that mechanisms of neutrophil clearance are essential to limiting Hla-mediated dermonecrosis. We hypothesized that CD36, a scavenger receptor which facilitates recognition of apoptosing cells, would play a significant role in regulating Hla-mediated inflammation and tissue injury during S. aureus SSSI. In this study, we show that CD36 on macrophages negatively regulates dermonecrosis caused by Hla-producing S. aureus. This regulation is independent of bacterial burden, as CD36 also limits dermonecrosis caused by intoxication with sterile bacterial supernatant or purified Hla. Dermonecrotic lesions of supernatant intoxicated CD36(-/-) mice are significantly larger, with increased neutrophil accumulation and IL-1β expression, compared with CD36(+/+) (wild-type) mice. Neutrophil depletion of CD36(-/-) mice prevents this phenotype, demonstrating the contribution of neutrophils to tissue injury in this model. Furthermore, administration of CD36(+/+) but not CD36(-/-) macrophages near the site of intoxication reduces dermonecrosis, IL-1β production and neutrophil accumulation to levels seen in wild-type mice. This therapeutic effect is reversed by inhibiting actin polymerization in the CD36(+/+) macrophages, supporting a mechanism of action whereby CD36-dependent macrophage phagocytosis of apoptotic neutrophils regulates Hla-mediated dermonecrosis. Taken together, these data demonstrate that CD36 is essential for controlling the host innate response to S. aureus skin infection.

  18. Associations between CD36 gene polymorphisms and susceptibility to coronary artery heart disease

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Y.; Ling, Z.Y.; Deng, S.B.; Du, H.A.; Yin, Y.H.; Yuan, J.; She, Q.; Chen, Y.Q. [Department of Cardiology, The Second Affiliated Hospital, Chongqing Medical University, Chongqing (China)

    2014-08-08

    Associations between polymorphisms of the CD36 gene and susceptibility to coronary artery heart disease (CHD) are not clear. We assessed allele frequencies and genotype distributions of CD36 gene polymorphisms in 112 CHD patients and 129 control patients using semi-quantitative polymerase chain reaction (PCR) and restriction fragment length polymorphism (RFLP) analysis. Additionally, we detected CD36 mRNA expression by real-time quantitative PCR, and we quantified plasma levels of oxidized low-density lipoprotein (ox-LDL) using an enzyme-linked immunosorbent assay (ELISA). There were no significant differences between the two groups (P>0.05) in allele frequencies of rs1761667 or in genotype distribution and allele frequencies of rs3173798. The genotype distribution of rs1761667 significantly differed between CHD patients and controls (P=0.034), with a significantly higher frequency of the AG genotype in the CHD group compared to the control group (P=0.011). The plasma levels of ox-LDL in patients with the AG genotype were remarkably higher than those with the GG and AA genotypes (P=0.010). In a randomized sample taken from patients in the two groups, the CD36 mRNA expression of the CHD patients was higher than that of the controls. In CHD patients, the CD36 mRNA expression in AG genotype patients was remarkably higher than in those with an AA genotype (P=0.005). After adjusted logistic regression analysis, the AG genotype of rs1761667 was associated with an increased risk of CHD (OR=2.337, 95% CI=1.336-4.087, P=0.003). In conclusion, the rs1761667 polymorphism may be closely associated with developing CHD in the Chongqing Han population of China, and an AG genotype may be a genetic susceptibility factor for CHD.

  19. CD36 genetic variation, fat intake and liver fibrosis in chronic hepatitis C virus infection

    Science.gov (United States)

    Ramos-Lopez, Omar; Roman, Sonia; Martinez-Lopez, Erika; Fierro, Nora A; Gonzalez-Aldaco, Karina; Jose-Abrego, Alexis; Panduro, Arturo

    2016-01-01

    AIM To analyze the association of the CD36 polymorphism (rs1761667) with dietary intake and liver fibrosis (LF) in chronic hepatitis C (CHC) patients. METHODS In this study, 73 patients with CHC were recruited. The CD36 genotype (G > A) was determined by a TaqMan real-time PCR system. Dietary assessment was carried out using a three-day food record to register the daily intake of macronutrients. Serum lipids and liver enzymes were measured by a dry chemistry assay. LF evaluated by transient elastography (Fibroscan®) and APRI score was classified as mild LF (F1-F2) and advanced LF (F3-F4). RESULTS Overall, the CD36 genotypic frequencies were AA (30.1%), AG (54.8%), and GG (15.1%), whereas the allelic A and G frequencies were 57.5% and 42.5%, respectively. CHC patients who were carriers of the CD36 AA genotype had a higher intake of calories attributable to total fat and saturated fatty acids than those with the non-AA genotypes. Additionally, aspartate aminotransferase (AST) serum values were higher in AA genotype carriers compared to non-AA carriers (91.7 IU/L vs 69.8 IU/L, P = 0.02). Moreover, the AA genotype was associated with an increase of 30.23 IU/L of AST (β = 30.23, 95%CI: 9.0-51.46, P = 0.006). Likewise, the AA genotype was associated with advanced LF compared to the AG (OR = 3.60, 95%CI: 1.16-11.15, P = 0.02) or AG + GG genotypes (OR = 3.52, 95%CI: 1.18-10.45, P = 0.02). CONCLUSION This study suggests that the CD36 (rs1761667) AA genotype is associated with higher fat intake and more instances of advanced LF in CHC patients. PMID:27660673

  20. Selective transport of long-chain fatty acids by FAT/CD36 in skeletal muscle of broilers.

    Science.gov (United States)

    Guo, J; Shu, G; Zhou, L; Zhu, X; Liao, W; Wang, S; Yang, J; Zhou, G; Xi, Q; Gao, P; Zhang, Y; Zhang, S; Yuan, L; Jiang, Q

    2013-03-01

    Fatty acid translocase (FAT/CD36) is a membrane receptor that facilitates long-chain fatty acid uptake. To investigate its role in the regulation of long-chain fatty acid composition in muscle tissue, we studied and compared FAT/CD36 gene expression in muscle tissues of commercial broiler chickens and Chinese local Silky fowls. The results from gas chromatography-mass spectrometry analysis of muscle samples demonstrated that Chinese local Silky fowls had significantly higher (P FAT/CD36 and caveolin-1) in the m. ipsilateral pectoralis and biceps femoris were analyzed by Q-PCR, and FAT/CD36 expression levels showed significant differences between these types of chickens (P FAT/CD36 expression are positively correlated with LA content (r = 0.567, P FAT/CD36 cDNA demonstrated that overexpression of FAT/CD36 improves total FA uptake with a significant increase in the proportion of LA and AA, and a decreased proportion of palmitic acid. These results suggest that chicken FAT/CD36 may selectively transport LA and AA, which may lead to the higher LA deposition in muscle tissue.

  1. The phenotype of platelet CD36 deficiency in the blood donors of Shenzhen, China%深圳地区无偿献血者群体CD36抗原缺失型的表型分析

    Institute of Scientific and Technical Information of China (English)

    李大成; 蓝欲晓; 鲍自谦; 孙革; 钟福玲; 苏宇清

    2012-01-01

    Objective To analyze the phenotype and frequency of the CD36 deficiency among the volunteer blood donors in Shenzhen. Methods The phenotypes of CD36 deficiency were analyzed by monoclonal antibodies and flow cytome-try (FCM). Platelet-reactive antibodies in the plasmas of suspected donors were screened by the antigen capture enzyme-linked immmnosorbent assay and platelet suspension immunofluorescence test Results The frequency of CD36 deficiency among blood donors was found to be 3.06% (10/327 ), and the frequencies of type Ⅰ and Ⅱ deficiencies were found in 0. 31% (1/327) and 2.75% (9/327) .respectively. No platelet-reactive antibodies were detected in the plasmas of 3 female donors with CD36 deficiency. Conclusion The frequencies of CD36 deficiency in blood donors of Shenzhen are found that the same ranges with the other Asians. These results suggest the necessity to concern the clinical effects of isoimmunization caused by CD36 deficiency in transfusion medicine.%目的 分析深圳地区无偿献血者群体CD36抗原缺失型的筛查和表型情况.方法 应用单克隆抗体和流式细胞技术在327名献血者中检测CD36抗原缺失型个体,应用血小板单克隆抗体捕获酶联免疫技术和流式细胞术筛查献血者血浆中的血小板抗体.结果 此次筛查得到的深圳献血者的CD36抗原缺失型频率为3.06%( 10/327),其中Ⅰ型占0.31% (1/327),Ⅱ型占2.75% (9/327);在3名女性CD36抗原缺失型献血者的血浆中,均未检出血小板反应性抗体,包括抗-CD36.结论 深圳地区献血者群体中存在CD36抗原缺失型个体,其频率与亚洲其他地区人群的频率相当;对CD36的同簇免疫应该予以重视.

  2. Inflammatory stress increases hepatic CD36 translational efficiency via activation of the mTOR signalling pathway.

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    Chuan Wang

    Full Text Available Inflammatory stress is an independent risk factor for the development of non-alcoholic fatty liver disease (NAFLD. Although CD36 is known to facilitate long-chain fatty acid uptake and contributes to NAFLD progression, the mechanisms that link inflammatory stress to hepatic CD36 expression and steatosis remain unclear. As the mammalian target of rapamycin (mTOR signalling pathway is involved in CD36 translational activation, this study was undertaken to investigate whether inflammatory stress enhances hepatic CD36 expression via mTOR signalling pathway and the underlying mechanisms. To induce inflammatory stress, we used tumour necrosis factor alpha (TNF-α and interleukin-6 (IL-6 stimulation of the human hepatoblastoma HepG2 cells in vitro and casein injection in C57BL/6J mice in vivo. The data showed that inflammatory stress increased hepatic CD36 protein levels but had no effect on mRNA expression. A protein degradation assay revealed that CD36 protein stability was not different between HepG2 cells treated with or without TNF-α or IL-6. A polysomal analysis indicated that CD36 translational efficiency was significantly increased by inflammatory stress. Additionally, inflammatory stress enhanced the phosphorylation of mTOR and its downstream translational regulators including p70S6K, 4E-BP1 and eIF4E. Rapamycin, an mTOR-specific inhibitor, reduced the phosphorylation of mTOR signalling pathway and decreased the CD36 translational efficiency and protein level even under inflammatory stress resulting in the alleviation of inflammatory stress-induced hepatic lipid accumulation. This study demonstrates that the activation of the mTOR signalling pathway increases hepatic CD36 translational efficiency, resulting in increased CD36 protein expression under inflammatory stress.

  3. Different patterns of {sup 123}I-BMIPP myocardial accumulation in patients with type I and II CD36 deficiency

    Energy Technology Data Exchange (ETDEWEB)

    Watanabe, Kenichi; Nagatomo, Takafumi [Niigata Coll. of Pharmacy (Japan); Toba, Ken; Ogawa, Yusuke; Aizawa, Yoshifusa; Tanabe, Naohito; Miyajima, Seiichi; Kusano, Yoriko; Hirokawa, Yoichi

    1997-12-01

    The CD36 molecule is a multifunctional membrane type receptor glycoprotein that reacts with thrombospondin, collagen, oxidized LDL and long-chain fatty acids (LCFA). LCFA are one of the major cardiac energy substrates, hence LCFA metabolism may have an important role in cardiac diseases. In this study, we analyzed CD36 expression in 200 patients with heart diseases (44 patients with hypertrophic cardiomyopathy (HCM), 16 with dilated cardiomyopathy (DCM), 26 with old myocardial infarction (OMI), 55 with angina pectoris (AP) and 59 with other miscellaneous heart diseases) using a flow cytometer. {sup 123}I-{beta}-methyl-p-iodophenylpentadecanoic acid (BMIPP) myocardial accumulation was also examined in some patients. Eight patients (2 with HCM, 1 with DCM, 2 with OMI, and 3 with AP) were diagnosed as having type I CD36 deficiency (neither platelets nor monocytes expressed CD36). Sixteen patients (3 with HCM, 1 with DCM, 1 with OMI, 8 with AP, and 3 with other heart diseases) showed type II CD36 deficiency (monocytes expressed CD36 but platelets did not). In all 8 patients with type I CD36 deficiency, there was no BMIPP accumulation in the heart. However, in 13 patients with type II CD36 deficiency, focally reduced BMIPP accumulation was observed, but there were no patients without BMIPP accumulation. CD36 deficiency was observed in a higher proportion (12%) of patients with heart disease in this study than in a reported control study. Type I CD36 deficiency is associated with absence of BMIPP accumulation in the heart, hence it may have an important role in LCFA metabolic disorders and some types of cardiac hypertrophy as well as other heart diseases. (author)

  4. CD36 abnormality and impaired myocardial long-chain fatty acid uptake in patients with hypertrophic cardiomyopathy

    Energy Technology Data Exchange (ETDEWEB)

    Okamoto, Fumio; Tanaka, Takao; Sohmiya, Koichi; Kawamura, Keishiro [Osaka Medical Coll., Takatsuki (Japan)

    1998-07-01

    In this study, in order to discover the relationship between hypertrophic cardiomyopathy (HCM) and the CD36 molecular abnormality, the expression level of platelet CD36 and CD36 cDNA in 55 HCM patients was analyzed. Twelve patients showed negligible (<5%) CD36 expression on their platelets. Among them, one was found to be homozygous for the C-478{yields}T substitution and 6 were heterozygous for the C-478{yields}T substitution. In 9 patients, CD36 was expressed by less than 50% of the platelets. One of them was found to be heterozygous for the C-478{yields}T substitution. Two other patients were also found to be heterozygous for this point mutation, although their platelets expressed CD36. Thus, 23 out of 55 (41.8%) HCM patients had negligible (<5%) or reduced (<50%) levels of CD36 expression on platelets, or had a point mutation of CD36 cDNA. These 55 HCM patients were also evaluated with myocardial scintigraphy both for long-chain fatty acid (LCFA) uptake and perfusion, which showed a moderate to severe discrepancy between myocardial LCFA accumulation and myocardial perfusion in 95.5% of the patients (21/23). On the other hand, 70% of the patients with normal (>90%) CD36 expression (14/20) did not show any severe discrepancies between myocardial LCFA accumulation and myocardial perfusion. These data could suggest that abnormal myocardial LCFA metabolism seen in HCM patients may be related to abnormality of the CD36 molecule, and that abnormalities of this molecule may be linked to the cause of some types of HCM. (K.H.)

  5. 人血小板表面CD36糖蛋白检测方法的建立及初步应用%Establishment of Method Detecting CD36 Expression on Human Platelet and Its Application

    Institute of Scientific and Technical Information of China (English)

    刘瑛; 许先国; 蓝小飞; 马开荣; 陈舒; 洪小珍; 何吉; 朱发明; 吕杭军

    2013-01-01

    个体血小板表面CD36抗原缺乏在随机输注时有产生抗-CD36免疫反应的风险,是血小板输注无效的原因之一.本研究应用流式细胞术检测杭州地区单采血小板供者的血小板表面CD36抗原表达情况,并分析个体血小板上CD36缺失表型的频率.留取献血者新鲜抗凝血样,经离心获取富血小板血浆,洗涤并调整血小板计数至1×106.采用CD36-FITC、CI41-PE单克隆抗体和血小板孵育反应,然后用流式细胞仪检测和分析血小板表面糖蛋白CD36抗原表达情况.对于血小板表面CD36抗原阴性的标本,进一步筛查其单核细胞表面CD36的表达情况.结果表明:192例无偿献血者筛查出7例血小板表面CD36抗原阴性,CD36缺失型频率为3.6%,均为Ⅱ型缺失.人群中个体CD36抗原表达强度存在差异,参照CD36几何平均荧光强度数值大小,59例为低表达,126例为高表达.结论:人群中存在CD36Ⅱ型缺失表型,这些数据将为研究CD36抗原分布提供参考,有助于解决血小板输注无效问题.%The individual with the deficiency of CD36 antigen on platelet displayed the risk of anti-CD36 immune reaction induced by transfusion,which is one of the reasons for platelet transfusion refractoriness (PTR).This study was purposed to detect the expression level of CD36 antigen on platelet by flow cytometry among aphoresis platelet donors of Hangzhou area,and the frequency of CD36 deficiency was analyzed.Platelet-rich plasma (PRP) was separated from fresh anticoagulant whole blood by centrifugation,then the platelets were washed and adjusted to 1 × 106.The platelets were incubated with FITC-labeled CD36 and PE-labeled CD41 monoclonal antibodies,then the expression level of CD36 was detected by flow cytometry.The CD36 expression on monocytes for the samples of CD36-deficiency on the platelets was further analyzed.The results showed that 7 samples with CD36 antigen deficiency were found in 192 aphoresis platelet donors

  6. miRNA-133a attenuates lipid accumulation via TR4-CD36 pathway in macrophages.

    Science.gov (United States)

    Peng, Xiao-Ping; Huang, Lei; Liu, Zhi-Hong

    2016-08-01

    lipid metabolism is the major causes of atherosclerosis. There is increasing evidence that miR-133a plays an important role in atherosclerosis. However, the regulatory mechanism of miR-133a in macrophages is still unclear. Several lines of evidence indicate that loss of TR4 leads to reduce lipid accumulation in liver and adipose tissues, etc, and lesional macrophages-derived TR4 can greatly increase the foam cell formation through increasing the CD36-mediated the uptake of ox-LDL. Interestingly, computational analysis suggests that TR4 may be a target gene of miR-133a. Here, we examined whether miR-133a regulates TR4 expression in ox-LDL-induced mouse RAW 264.7 macrophages, thereby affecting lipid accumulation. Using ox-LDL-treatment RAW 264.7 macrophages transfected with miR-133a mimics or inhibitors, we have showed that miR-133a can directly regulate the expression of TR4 in RAW 264.7 cells, thereby attenuates CD36-medide lipid accumulation. Furthermore, our studies suggest an additional explanation for the regulatory mechanism of miR-133a regulation to its functional target, TR4 in RAW 264.7 macrophages. Thus, our findings suggest that miR-133a may regulate lipid accumulation in ox-LDL-stimulated RAW 264.7 macrophages via TR4-CD36 pathway.

  7. Multiple metabolic hits converge on CD36 as novel mediator of tubular epithelial apoptosis in diabetic nephropathy.

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    Katalin Susztak

    2005-02-01

    Full Text Available BACKGROUND: Diabetic nephropathy (DNP is a common complication of type 1 and type 2 diabetes mellitus and the most common cause of kidney failure. While DNP manifests with albuminuria and diabetic glomerulopathy, its progression correlates best with tubular epithelial degeneration (TED and interstitial fibrosis. However, mechanisms leading to TED in DNP remain poorly understood. METHODS AND FINDINGS: We found that expression of scavenger receptor CD36 coincided with proximal tubular epithelial cell (PTEC apoptosis and TED specifically in human DNP. High glucose stimulated cell surface expression of CD36 in PTECs. CD36 expression was necessary and sufficient to mediate PTEC apoptosis induced by glycated albumins (AGE-BSA and CML-BSA and free fatty acid palmitate through sequential activation of src kinase, and proapoptotic p38 MAPK and caspase 3. In contrast, paucity of expression of CD36 in PTECs in diabetic mice with diabetic glomerulopathy was associated with normal tubular epithelium and the absence of tubular apoptosis. Mouse PTECs lacked CD36 and were resistant to AGE-BSA-induced apoptosis. Recombinant expression of CD36 in mouse PTECs conferred susceptibility to AGE-BSA-induced apoptosis. CONCLUSION: Our findings suggest a novel role for CD36 as an essential mediator of proximal tubular apoptosis in human DNP. Because CD36 expression was induced by glucose in PTECs, and because increased CD36 mediated AGE-BSA-, CML-BSA-, and palmitate-induced PTEC apoptosis, we propose a two-step metabolic hit model for TED, a hallmark of progression in DNP.

  8. Increased FAT/CD36 cycling and lipid accumulation in myotubes derived from obese type 2 diabetic patients.

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    Celine Aguer

    Full Text Available BACKGROUND: Permanent fatty acid translocase (FAT/CD36 relocation has previously been shown to be related to abnormal lipid accumulation in the skeletal muscle of type 2 diabetic patients, however mechanisms responsible for the regulation of FAT/CD36 expression and localization are not well characterized in human skeletal muscle. METHODOLOGY/PRINCIPAL FINDINGS: Primary muscle cells derived from obese type 2 diabetic patients (OBT2D and from healthy subjects (Control were used to examine the regulation of FAT/CD36. We showed that compared to Control myotubes, FAT/CD36 was continuously cycling between intracellular compartments and the cell surface in OBT2D myotubes, independently of lipid raft association, leading to increased cell surface FAT/CD36 localization and lipid accumulation. Moreover, we showed that FAT/CD36 cycling and lipid accumulation were specific to myotubes and were not observed in reserve cells. However, in Control myotubes, the induction of FAT/CD36 membrane translocation by the activation of (AMP-activated protein kinase (AMPK pathway did not increase lipid accumulation. This result can be explained by the fact that pharmacological activation of AMPK leads to increased mitochondrial beta-oxidation in Control cells. CONCLUSION/SIGNIFICANCE: Lipid accumulation in myotubes derived from obese type 2 diabetic patients arises from abnormal FAT/CD36 cycling while lipid accumulation in Control cells results from an equilibrium between lipid uptake and oxidation. As such, inhibiting FAT/CD36 cycling in the skeletal muscle of obese type 2 diabetic patients should be sufficient to diminish lipid accumulation.

  9. CD36 and SR-BI are involved in cellular uptake of provitamin A carotenoids by Caco-2 and HEK cells, and some of their genetic variants are associated with plasma concentrations of these micronutrients in humans.

    Science.gov (United States)

    Borel, Patrick; Lietz, Georg; Goncalves, Aurélie; Szabo de Edelenyi, Fabien; Lecompte, Sophie; Curtis, Peter; Goumidi, Louisa; Caslake, Muriel J; Miles, Elizabeth A; Packard, Christopher; Calder, Philip C; Mathers, John C; Minihane, Anne M; Tourniaire, Franck; Kesse-Guyot, Emmanuelle; Galan, Pilar; Hercberg, Serge; Breidenassel, Christina; González Gross, Marcela; Moussa, Myriam; Meirhaeghe, Aline; Reboul, Emmanuelle

    2013-04-01

    Scavenger receptor class B type I (SR-BI) and cluster determinant 36 (CD36) have been involved in cellular uptake of some provitamin A carotenoids. However, data are incomplete (e.g., there are no data on α-carotene), and it is not known whether genetic variants in their encoding genes can affect provitamin A carotenoid status. The objectives were 1) to assess the involvement of these scavenger receptors in cellular uptake of the main provitamin A carotenoids (i.e., β-carotene, α-carotene, and β-cryptoxanthin) as well as that of preformed vitamin A (i.e., retinol) and 2) to investigate the contribution of genetic variations in genes encoding these proteins to interindividual variations in plasma concentrations of provitamin A carotenoids. The involvement of SR-BI and CD36 in carotenoids and retinol cellular uptake was investigated in Caco-2 and human embryonic kidney (HEK) cell lines. The involvement of scavenger receptor class B type I (SCARB1) and CD36 genetic variants on plasma concentrations of provitamin A carotenoids was assessed by association studies in 3 independent populations. Cell experiments suggested the involvement of both proteins in cellular uptake of provitamin A carotenoids but not in that of retinol. Association studies showed that several plasma provitamin A carotenoid concentrations were significantly different (P < 0.0083) between participants who bore different genotypes at single nucleotide polymorphisms and haplotypes in CD36 and SCARB1. In conclusion, SR-BI and CD36 are involved in cellular uptake of provitamin A carotenoids, and genetic variations in their encoding genes may modulate plasma concentrations of provitamin A carotenoids at a population level.

  10. Role of FAT/CD36 in high-fat diet-induced adipose tissue inflammation%FAT/CD36在高脂喂养小鼠脂肪组织炎症中的作用

    Institute of Scientific and Technical Information of China (English)

    张艳艳; 赵蕾; 谢云霞; 陈压西; 阮雄中

    2015-01-01

    AIM: To investigate the role of fatty acid translocase/CD36 (FAT/CD36) in adipose tissue in-flammation induced by a high-fat diet.METHODS:C57BL/6J mice were fed with a normal-chow diet ( NCD) or a high-fat diet ( HFD) for 14 weeks.The content of free fatty acid ( FFA) in the serum was measured by ELISA.The expression of CD36, cytokines and chemokines at mRNA and protein levels in the adipose tissues was determined by real-time poly-merase chain reaction and Western blotting.Immunohistochemical staining was used to examine the macrophages infiltration in the adipose tissues.The inflammatory responses in CD36 knockout mice and wild type mice with high-fat diet were ana-lyzed.RESULTS:The levels of FAT/CD36 were higher in HFD group than that in NCD group.HFD feeding enhanced the mRNA and protein expression of IL-1β, IL-6, TNF-α, MCP-1 and MIP-1, as well as promoted macrophage infiltration in the adipose tissues.Interestingly, as fed with HFD, the expression of cytokines/chemokines and macrophage infiltration were significantly reduced in adipose tissues of the CD36 knockout mice, compared with the wild type mice.CONCLU-SION:High-fat diet promotes adipose tissue inflammation in the mice in a FAT/CD36-dependent manner.%目的:探讨脂肪酸转运酶/白细胞分化抗原36(fatty acid translocase/CD36,FAT/CD36)在高脂饮食诱导的小鼠脂肪组织炎症中的作用。方法:将6周龄雄性C57BL/6J小鼠分别随机分为普通饮食组和高脂饮食组,喂养14周后,ELISA测定血清游离脂肪酸( FFA)含量,应用荧光实时定量 PCR和Western blotting检测脂肪组织中FAT/CD36及炎症/趋化因子( IL-1β、IL-6、TNF-α、MCP-1、MIP-1) mRNA和蛋白的表达,免疫组织化学染色检测脂肪组织巨噬细胞浸润,比较高脂喂养14周的野生型小鼠和CD36基因敲除小鼠的脂肪组织炎症反应情况。结果:与普通饮食组相比,高脂饮食能增强C57BL/6J小鼠脂肪组织的FAT/CD

  11. Dependence of Brown Adipose Tissue Function on CD36-Mediated Coenzyme Q Uptake

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    Courtney M. Anderson

    2015-02-01

    Full Text Available Brown adipose tissue (BAT possesses the inherent ability to dissipate metabolic energy as heat through uncoupled mitochondrial respiration. An essential component of the mitochondrial electron transport chain is coenzyme Q (CoQ. While cells synthesize CoQ mostly endogenously, exogenous supplementation with CoQ has been successful as a therapy for patients with CoQ deficiency. However, which tissues depend on exogenous CoQ uptake as well as the mechanism by which CoQ is taken up by cells and the role of this process in BAT function are not well understood. Here, we report that the scavenger receptor CD36 drives the uptake of CoQ by BAT and is required for normal BAT function. BAT from mice lacking CD36 displays CoQ deficiency, impaired CoQ uptake, hypertrophy, altered lipid metabolism, mitochondrial dysfunction, and defective nonshivering thermogenesis. Together, these data reveal an important new role for the systemic transport of CoQ to BAT and its function in thermogenesis.

  12. CD36/Sirtuin 1 Axis Impairment Contributes to Hepatic Steatosis in ACE2-Deficient Mice

    Science.gov (United States)

    Qadri, Fatimunnisa; Penninger, Josef M.; Santos, Robson Augusto S.; Bader, Michael

    2016-01-01

    Background and Aims. Angiotensin converting enzyme 2 (ACE2) is an important component of the renin-angiotensin system. Since angiotensin peptides have been shown to be involved in hepatic steatosis, we aimed to evaluate the hepatic lipid profile in ACE2-deficient (ACE2−/y) mice. Methods. Male C57BL/6 and ACE2−/y mice were analyzed at the age of 3 and 6 months for alterations in the lipid profiles of plasma, faeces, and liver and for hepatic steatosis. Results. ACE2−/y mice showed lower body weight and white adipose tissue at all ages investigated. Moreover, these mice had lower levels of cholesterol, triglycerides, and nonesterified fatty acids in plasma. Strikingly, ACE2−/y mice showed high deposition of lipids in the liver. Expression of CD36, a protein involved in the uptake of triglycerides in liver, was increased in ACE2−/y mice. Concurrently, these mice exhibited an increase in hepatic oxidative stress, evidenced by increased lipid peroxidation and expression of uncoupling protein 2, and downregulation of sirtuin 1. ACE2−/y mice also showed impairments in glucose metabolism and insulin signaling in the liver. Conclusions. Deletion of ACE2 causes CD36/sirtuin 1 axis impairment and thereby interferes with lipid homeostasis, leading to lipodystrophy and steatosis. PMID:28101297

  13. Hormonal and nutritional regulation of alternative CD36 transcripts in rat liver – a role for growth hormone in alternative exon usage

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    Fernández-Pérez Leandro

    2007-07-01

    Full Text Available Abstract Background CD36 is a multiligand receptor involved in various metabolic pathways, including cellular uptake of long-chain fatty acids. Defect function or expression of CD36 can result in dyslipidemia or insulin resistance. We have previously shown that CD36 expression is female-predominant in rat liver. In the present study, hormonal and nutritional regulation of hepatic CD36 expression was examined in male and female rats. Since alternative transcription start sites have been described in murine and human Cd36, we investigated whether alternative CD36 transcripts are differentially regulated in rat liver during these conditions. Results Sequence information of the rat Cd36 5'-UTR was extended, showing that the gene structure of Cd36 in rat is similar to that previously described in mouse with at least two alternative first exons. The rat Cd36 exon 1a promoter was sequenced and found to be highly similar to murine and human Cd36. We show that alternative first exon usage is involved in the female-predominant expression of CD36 in rat liver and during certain hormonal states that induce CD36 mRNA abundance. Estrogen treatment or continuous infusion of growth hormone (GH in male rats induced CD36 expression preferentially through the exon 1a promoter. Old age was associated with increased CD36 expression in male rats, albeit without any preferential first exon usage. Intermittent GH treatment in old male rats reversed this effect. Mild starvation (12 hours without food reduced CD36 expression in female liver, whereas its expression was increased in skeletal muscle. Conclusion The results obtained in this study confirm and extend our previous observation that GH is an important regulator of hepatic CD36, and depending on the mode of treatment (continuous or intermittent the gene might be either induced or repressed. We suggest that the effects of continuous GH secretion in females (which is stimulatory and intermittent GH secretion in

  14. Circulating CD36 and fractalkine levels are associated with vulnerable plaque progression in patients with unstable angina pectoris.

    Science.gov (United States)

    Li, Rui Jian; Yang, Ming; Li, Ji Fu; Xue, Li; Chen, Yu Guo; Chen, Wen Qiang

    2014-11-01

    The chemokine, fractalkine, independently enhances the vulnerability of coronary atherosclerotic plaques. The present study investigated the combined effects of CD36 and fractalkine on coronary plaque progression in patients with unstable angina pectoris. In the present study, 120 unstable angina pectoris patients undergoing coronary angiography and intravascular ultrasound were divided into two groups: an intermediate lesion group (lumen diameter stenosis 50-70%, 80 patients) and a severe lesion group (at least one lesion with lumen diameter stenosis > 70%, 40 patients). The control group consisted of 40 healthy age- and sex-matched subjects. Concentrations of CD36 and fractalkine were measured by enzyme-linked immunosorbent assay. Major adverse cardiovascular events were monitored over a 2-year follow up. Intravascular ultrasound showed that patients with severe lesions had more calcified and mixed plaques, and a larger plaque area and plaque burden than patients with intermediate lesions (P < 0.05-0.01). More patients with severe lesions underwent stent deployment (P < 0.05) than those with intermediate lesions. CD36 and fractalkine concentrations were significantly higher in the severe lesion patients (P < 0.05), and both had significant positive correlations (P < 0.05) with the plaque burden of atherosclerotic lesions. Using the matched nested case-control study, we found that CD36 and fractalkine levels were higher in patients with recurrent major adverse cardiovascular events than controls (P < 0.05). In conclusion, CD36 and fractalkine both promote, and might synergistically enhance, the progression of coronary atherosclerotic plaques.

  15. Is CD36 gene polymorphism in region encoding lipid-binding domain associated with early onset CAD?

    Science.gov (United States)

    Rać, Monika; Safranow, Krzysztof; Kurzawski, Grzegorz; Krzystolik, Andrzej; Chlubek, Dariusz

    2013-11-01

    CD36 is a fatty acid translocase in striated muscle cells and cardiomyocytes. Some study suggested that alterations in CD36 gene may be associated with coronary artery disease (CAD) risk. The aim of the current study was to compare the frequency of CD36 variants in region encoding lipid-binding domain in Caucasian patients with early-onset CAD, no-CAD adult controls and neonates. The study group comprised 100 patients with early onset CAD. The genetic control groups were 306 infants and 40 no-CAD adults aged over 70years. Exons 4, 5 and 6 including fragments of flanking introns were studied using the denaturing high-performance liquid chromatography technique and direct sequencing. Changes detected in analyzed fragment of CD36: IVS3-6 T/C (rs3173798), IVS4-10 G/A (rs3211892), C311T (Thr104Ile, not described so far) in exon 5, G550A (Asp184Asn, rs138897347), C572T (Pro191Leu, rs143150225), G573A (Pro191Pro, rs5956) and A591T (Thr197Thr, rs141680676) in exon 6. No significant differences in the CD36 genotype, allele and haplotype frequencies were found between the three groups. Only borderline differences (p=0.066) were found between early onset CAD patients and newborns in the frequencies of 591T allele (2.00% vs 0.50%) and CGCGCGT haplotype (2.00% vs 0.50%) with both IVS3-6C and 591T variant alleles. In conclusion, CD36 variants: rs3173798, rs3211892, rs138897347, rs5956, rs143150225 rs141680676 and C311T do not seem to be involved in the risk of early-onset CAD in Caucasian population.

  16. Expression and Significance of CD36 on Acute Radiation-induced Lung Injury%急性放射性肺损伤肺组织CD36表达及意义

    Institute of Scientific and Technical Information of China (English)

    曹丽艳; 于洪; 赵俊华; 赵玉霞; 门桐林; 赵娜; 刘丹; 白露

    2011-01-01

    采用健康雄性Wistar大鼠,6 MV X射线单次伞胸野照射15 Gv,于照后不同时间HE和Masson染色观察大鼠肺组织的病理改变,免疫组化方法分析凝血酶敏感蛋白-1受体CD36在肺组织中的表达,以探讨放射性肺损伤大鼠肺组织病理和CD36在不同时间段的表达和意义.结果表明,HE和Masson染色提示照射后的1周肺泡腔有炎性细胞渗出,继之间质水肿,4及8周出现肺泡腔变小甚至结构破坏,局部实变,肺问质出现胶原纤维;CD36免疫组化标记显示:照射组在照后的第1、2、4、8周时间段CD36表达均明显强于对照组(P<0.01).以上结果说明CD36参与了放射性肺损伤的发生发展过程,阻抑其表达可能对放射肺损伤有防治作用.%To investigate the pathology of acute radiation- induced lung injury and expression and significance of thrombospondin-1 (TSP-1) receptor CD36 during different phases in rats, forty Wistar rats were randomly divided into control group (C) and radiation group (R). Both groups were radiated with 6WV X ray linear accelerator at dose of 15 Gy thoracically, 2 Gy/min, with SSD 1 m and radiation area 4.5 cm×4.5 cm. The pathological change of lung tissue and the expression of CD36 were detected with HE, Masson and immunohistochemistry staining, respectively. Result HE and Masson staining showed that only one week after radiation, the alveolar spaces had exudative inflammatory cells,following interstitial edema, and at 4 and 8 weeks, alveolar spaces shrank, even its structure was destroyed with local consol, and pulmonary interstitium appeared collagen fibers. The expression of CD36 was significantly higher in radiation group at all phases (p<0.01) . The expression of CD36 increased significantly in radiation-induced lung injuy. CD36 participated in the process of radation-induced lung injury, and inhibition of CD36 expression may have preventive effect on radation-induced lung injury.

  17. Effect of high glucose on the expression of CD36 and lipid accumulation in THP-1 macrophages

    Institute of Scientific and Technical Information of China (English)

    谭玉林

    2014-01-01

    Objective To investigate the effect of high glucose on regulating the expression of CD36 and lipid accumulation in THP-1 macrophages.Methods THP-1 macrophages were incubated with different concentrations of D-glucose(5.6,11,20,30 and 35 mmol/L),50 mg/L oxidized low density lipoprotein(ox-LDL),50 mg/L oxLDL+20 mmol/L D-glucose for 24 h.Total cholesterol content in THP-1 macrophages was determined by high performance liquid chromatography,the lipid accumulation was detected by oil red O stain.CD36 mRNA and

  18. 血小板CD36新等位基因1142T>G序列分析及确认%Analysis and identification of a novel CD36 allele, 1142 T>G

    Institute of Scientific and Technical Information of China (English)

    林凤秋; 李晓丰; 邵超鹏; 李剑平

    2015-01-01

    BACKGROUND:As a main antigen of platelet, CD36 antigen is also known as platelet glycoprotein IV (GPIV). The mutation of CD36 gene may result in deficiency of the antigen. OBJECTIVE:To identify a novel CD36 alele. METHODS: DNA was isolated from peripheral blood sample, and 12 coding regions of CD36 gene were amplified by PCR. Sequencing-based typing was used to analyze the sequence of the target regions. The derived sequences were aligned with the standard sequence of NG_008192 in GenBank to identify the novel alele. RESULTS AND CONCLUSION: 1142 T>G mutation was detected in exon 12 of CD36 gene of the proband, and the other regions were consistent with the standard sequence. No data or report about 1142 T>G was found in GenBank or National Center for Biotechnology Information (NCBI), and thus it was reported to GenBank and received by number KM275213. 1142 T>G results in amino acid 381 Leu>Ser of the CD36 protein. There is a big difference in hydrophilia and polarity of the two amino acids. Also the 381 amino acid locates in highly conserved region. Thus it is speculated that 1142 T>G may reduce or vanish the activity of the protein.%背景:作为血小板上的主要抗原之一,CD36抗原又被称为血小板糖蛋白Ⅳ,其基因变异会导致 CD36抗原缺失。  目的:序列分析并确认1例CD36抗原新等位基因。  方法:提取外周血样本DNA,应用聚合酶链式反应扩增CD36基因的12个编码区序列片段,应用直接测序法对目的片段的序列进行检测。所得序列与基因库中编号为 NG_008192的标准序列进行比对分析,以确定新的基因突变。  结果与结论:被检样本在第12外显子的1142位发生T>G的碱基突变,其他外显子序列与标准序列一致。检索国际基因数据库GenBank和美国国立生物技术信息中心(National Center for Biotechnology Information,NCBI),均未发现关于1142 T>G突变的数据和报道,因此为国际上首次确认

  19. Increased hepatic CD36 expression with age is associated with enhanced susceptibility to nonalcoholic fatty liver disease

    NARCIS (Netherlands)

    Sheedfar, Fareeba; Sung, Miranda My; Aparicio-Vergara, Marcela; Kloosterhuis, Niels J; Miquilena-Colina, Maria Eugenia; Vargas-Castrillón, Javier; Febbraio, Maria; Jacobs, René L; de Bruin, Alain; Vinciguerra, Manlio; García-Monzón, Carmelo; Hofker, Marten H; Dyck, Jason Rb; Koonen, Debby P Y

    2014-01-01

    CD36 has been associated with obesity and diabetes in human liver diseases, however, its role in age-associated nonalcoholic fatty liver disease (NAFLD) is unknown. Therefore, liver biopsies were collected from individuals with histologically normal livers (n=30), and from patients diagnosed with si

  20. Increased hepatic CD36 expression with age is associated with enhanced susceptibility to nonalcoholic fatty liver disease.

    NARCIS (Netherlands)

    Sheedfar, F.; Sung, M.M.; Aparicio-Vergara, M.; Kloosterhuis, N.J.; Miquilena-Colina, M.E.; Vargas-Castrillon, J.; Febbraio, M.; Jacobs, R.L.; Bruin, A. de; Vinciguerra, M.; Garcia-Monzon, C.; Hofker, M.H.; Dyck, J.R.; Koonen, D.P.

    2014-01-01

    CD36 has been associated with obesity and diabetes in human liver diseases, however, its role in age-associated nonalcoholic fatty liver disease (NAFLD) is unknown. Therefore, liver biopsies were collected from individuals with histologically normal livers (n=30), and from patients diagnosed with si

  1. Amyloid-β inhibits No-cGMP signaling in a CD36- and CD47-dependent manner.

    Directory of Open Access Journals (Sweden)

    Thomas W Miller

    Full Text Available Amyloid-β interacts with two cell surface receptors, CD36 and CD47, through which the matricellular protein thrombospondin-1 inhibits soluble guanylate cyclase activation. Here we examine whether amyloid-β shares this inhibitory activity. Amyloid-β inhibited both drug and nitric oxide-mediated activation of soluble guanylate cyclase in several cell types. Known cGMP-dependent functional responses to nitric oxide in platelets and vascular smooth muscle cells were correspondingly inhibited by amyloid-β. Functional interaction of amyloid-β with the scavenger receptor CD36 was indicated by inhibition of free fatty acid uptake via this receptor. Both soluble oligomer and fibrillar forms of amyloid-β were active. In contrast, amyloid-β did not compete with the known ligand SIRPα for binding to CD47. However, both receptors were necessary for amyloid-β to inhibit cGMP accumulation. These data suggest that amyloid-β interaction with CD36 induces a CD47-dependent signal that inhibits soluble guanylate cyclase activation. Combined with the pleiotropic effects of inhibiting free fatty acid transport via CD36, these data provides a molecular mechanism through which amyloid-β can contribute to the nitric oxide signaling deficiencies associated with Alzheimer's disease.

  2. Estradiol enhances effects of fructose rich diet on cardiac fatty acid transporter CD36 and triglycerides accumulation.

    Science.gov (United States)

    Korićanac, Goran; Tepavčević, Snežana; Romić, Snježana; Živković, Maja; Stojiljković, Mojca; Milosavljević, Tijana; Stanković, Aleksandra; Petković, Marijana; Kamčeva, Tina; Žakula, Zorica

    2012-11-05

    Fructose rich diet increases hepatic triglycerides production and has deleterious cardiac effects. Estrogens are involved in regulation of lipid metabolism as well, but their effects are cardio beneficial. In order to study effects of fructose rich diet on the main heart fatty acid transporter CD36 and the role of estrogens, we subjected ovariectomized female rats to the standard diet or fructose rich diet, with or without estradiol (E2) replacement. The following parameters were analyzed: feeding behavior, visceral adipose tissue mass, plasma lipids, cardiac CD36 expression, localization and insulin regulation, as well as the profile of cardiac lipids. Results show that fructose rich diet significantly increased plasma triglycerides and decreased plasma free fatty acid (FFA) concentration, while E2 additionally emphasized FFA decrease. The fructose diet increased cardiac plasma membrane content of CD36 in the basal and insulin-stimulated states, and decreased its low density microsomes content. The E2 in fructose-fed rats raised the total cardiac protein content of CD36, its presence in plasma membranes and low density microsomes, and cardiac deposition of triglycerides, as well. Although E2 counteracts fructose in some aspects of lipid metabolism, and separately they have opposite cardiac effects, in combination with fructose rich diet, E2 additionally enhances CD36 presence in plasma membranes of cardiac cells and triglycerides accumulation, which paradoxically might promote deleterious effects of fructose diet on cardiac lipid metabolism. Taken together, the results presented in this work are of high importance for clinical administration of estrogens in females with a history of type 2 diabetes.

  3. Positive selection of a CD36 nonsense variant in sub-Saharan Africa, but no association with severe malaria phenotypes

    Science.gov (United States)

    Fry, Andrew E.; Ghansa, Anita; Small, Kerrin S.; Palma, Alejandro; Auburn, Sarah; Diakite, Mahamadou; Green, Angela; Campino, Susana; Teo, Yik Y.; Clark, Taane G.; Jeffreys, Anna E.; Wilson, Jonathan; Jallow, Muminatou; Sisay-Joof, Fatou; Pinder, Margaret; Griffiths, Michael J.; Peshu, Norbert; Williams, Thomas N.; Newton, Charles R.; Marsh, Kevin; Molyneux, Malcolm E.; Taylor, Terrie E.; Koram, Kwadwo A.; Oduro, Abraham R.; Rogers, William O.; Rockett, Kirk A.; Sabeti, Pardis C.; Kwiatkowski, Dominic P.

    2009-01-01

    The prevalence of CD36 deficiency in East Asian and African populations suggests that the causal variants are under selection by severe malaria. Previous analysis of data from the International HapMap Project indicated that a CD36 haplotype bearing a nonsense mutation (T1264G; rs3211938) had undergone recent positive selection in the Yoruba of Nigeria. To investigate the global distribution of this putative selection event, we genotyped T1264G in 3420 individuals from 66 populations. We confirmed the high frequency of 1264G in the Yoruba (26%). However, the 1264G allele is less common in other African populations and absent from all non-African populations without recent African admixture. Using long-range linkage disequilibrium, we studied two West African groups in depth. Evidence for recent positive selection at the locus was demonstrable in the Yoruba, although not in Gambians. We screened 70 variants from across CD36 for an association with severe malaria phenotypes, employing a case–control study of 1350 subjects and a family study of 1288 parent–offspring trios. No marker was significantly associated with severe malaria. We focused on T1264G, genotyping 10 922 samples from four African populations. The nonsense allele was not associated with severe malaria (pooled allelic odds ratio 1.0; 95% confidence interval 0.89–1.12; P = 0.98). These results suggest a range of possible explanations including the existence of alternative selection pressures on CD36, co-evolution between host and parasite or confounding caused by allelic heterogeneity of CD36 deficiency. PMID:19403559

  4. CD36 selection of 3D7 Plasmodium falciparum associated with severe childhood malaria results in reduced VAR4 expression

    Directory of Open Access Journals (Sweden)

    Hviid Lars

    2008-10-01

    Full Text Available Abstract Background A subset of the Plasmodium falciparum erythrocyte membrane protein 1 (PfEMP1SM is involved in the cytoadherence of P. falciparum-infected red blood cells (iRBC contributing to the pathogenesis of severe disease among young children in malaria endemic areas. The PfEMP1SM are encoded by group A var genes that are composed of a more constrained range of amino acid sequences than groups B and C var genes encoding PfEMP1UM associated with uncomplicated malaria. Also, unlike var genes from groups B and C, those from group A do not have sequences consistent with CD36 binding – a major cytoadhesion phenotype of P. falciparum isolates. Methods A 3D7 PfEMP1SM sub-line (3D7SM expressing VAR4 (PFD1235w/MAL8P1.207 was selected for binding to CD36. The protein expression of this parasite line was monitored by surface staining of iRBC using VAR4-specific antibodies. The serological phenotype of the 3D7SM parasites was determined by flow cytometry using malaria semi-immune and immune plasma and transcription of the 59 var genes in 3D7 were analysed by real-time quantitative reverse transcriptase-polymerase chain reaction (RT-PCR using var-specific primers. Results A selection-induced increased adhesion of 3D7SM iRBC to CD36 resulted in a reduced var4 transcription and VAR4 surface expression. Conclusion VAR4 is not involved in CD36 adhesion. The current findings are consistent with the notion that CD36 adhesion is not associated with particular virulent parasite phenotypes, such as those believed to be exhibited by VAR4 expressing parasites.

  5. Antiatherogenic effect of Pistacia lentiscus via GSH restoration and downregulation of CD36 mRNA expression.

    Science.gov (United States)

    Dedoussis, George V Z; Kaliora, Andriana C; Psarras, Stellios; Chiou, Antonia; Mylona, Anastasia; Papadopoulos, Nikolaos G; Andrikopoulos, Nikolaos K

    2004-06-01

    Pistacia lentiscus var. Chia (Anacardiaceae) grows almost exclusively on Chios Island, Greece, and gives a resinous exudate resin used for culinary purposes by Mediterranean people. We investigated the molecular mechanisms through which total polar extract of the resin inhibits oxidized low-density lipoprotein (oxLDL) cytotoxic effect on peripheral blood mononuclear cell (PBMC). Cells exposed to oxLDL underwent apoptosis and necrosis, dependent on the duration of exposure. When culturing cells with oxLDL and the polar extract concurrently, we observed inhibition of both the phenomena. Because under oxidative stress the pro-oxidant systems outbalance the antioxidant, potentially producing oxidative damage and ultimately leading to cell death, we measured the levels of intracellular antioxidant glutathione (GSH). Additionally, we measured CD36 expression, a class B scavenger receptor, on CD14-positive cells, as CD36 has been identified as the oxLDL receptor in macrophages and may play a pivotal role in atherosclerotic foam cell formation. oxLDL decreased GSH levels and upregulated CD36 expression. P. lentiscus extract restored GSH levels and downregulated CD36 expression, even at the mRNA level. In order to find out the biologically drastic constituents of the resin's polar extract, fractions derived from RP-HPLC analysis were examined for their antioxidant effect on oxidatively stressed PBMC. The triterpenoid fraction revealed remarkable increase in intracellular GSH. We suggest GSH restoration and downregulation of CD36 mRNA expression as the pathways via which P. lentiscus triterpenes exert antioxidant/antiatherogenic effect. Additionally, our results provide strong evidence of the resin's antiatherogenic effect; therefore it is credited with beneficial health aspects.

  6. FAT/CD36 is localized in sarcolemma and in vesicle-like structures in subsarcolemma regions, but not in mitochondria

    DEFF Research Database (Denmark)

    Jeppesen, Jacob; Mogensen, Martin; Prats, Clara;

    2010-01-01

    was performed on single muscle fibers dissected from soleus muscle of lean and obese Zucker rats and from the vastus lateralis muscle from humans. Co-staining against FAT/CD36 and MitoNEET clearly show that FAT/CD36 is highly present in sarcolemma and it also associates with some vesicle-like intracellular...

  7. CD36- and GPR120-mediated Ca2+ Signaling in Human Taste Bud Cells Mediates Differential Responses to Fatty Acids and is Altered in Obese Mice

    Science.gov (United States)

    Ozdener, Mehmet Hakan; Subramaniam, Selvakumar; Sundaresan, Sinju; Sery, Omar; Hashimoto, Toshihiro; Asakawa, Yoshinori; Besnard, Philippe; Abumrad, Nada A.; Khan, Naim Akhtar

    2014-01-01

    Background & Aims It is important to increase our understanding of gustatory detection of dietary fat and its contribution to fat preference. We studied the roles of the fat taste receptors CD36 and GPR120 and their interactions via Ca2+ signaling in fungiform taste bud cells (TBC). Methods We measured Ca2+ signaling in human TBC, transfected with small interfering RNAs (siRNAs) against mRNAs encoding CD36 and GPR120 (or control siRNAs). We also studied Ca2+ signaling in TBC from CD36−/− mice and from wild-type lean and obese mice. Additional studies were conducted with mouse enteroendocrine cell line STC-1 that express GPR120 and stably transfected with human CD36. We measured release of serotonin and GLP-1 from human and mice TBC in response to CD36 and GPR120 activation. Results High concentrations of linoleic acid induced Ca2+ signaling via CD36 and GPR120 in human and mice TBC as well as in STC-1 cells, whereas low concentrations induced Ca2+ signaling via only CD36. Incubation of human and mice fungiform TBC with lineoleic acid downregulated CD36 and upregulated GPR120 in membrane lipid rafts. Obese mice had decreased spontaneous preference for fat. Fungiform TBC from obese mice had reduced Ca2+ and serotonin responses but increased release of GLP1, along with reduced levels of CD36 and increased levels of GPR120 in lipid rafts. Conclusions CD36 and GPR120 have non-overlapping roles in TBC signaling during oro-gustatory perception of dietary lipids; these are differentially regulated by obesity. PMID:24412488

  8. Salvianolic acid B inhibits macrophage uptake of modified low density lipoprotein (mLDL) in a scavenger receptor CD36-dependent manner

    Science.gov (United States)

    Bao, Yi; Wang, Li; Xu, Yanni; Yang, Yuan; Wang, Lifei; Si, Shuyi; Cho, Sunghee; Hong, Bin

    2012-01-01

    CD36, a class B scavenger receptor, has been implicated in the pathogenesis of a host of vascular inflammatory diseases. Through a high-throughput screening (HTS) assay for CD36 antagonist, we previously identified salvianolic acid B (SAB), a hydrophilic component derived from the herb Danshen, as a potential candidate. Danshen, the dried roots of Salvia miltiorrhiza, has been widely used in China for the prevention and treatment of atherosclerosis-related disorders. Previous studies showed that SAB acted as an anti-oxidant by preventing lipid peroxidation and oxidized LDL (oxLDL) formation. The present study was to investigate the specificity and efficacy of SAB in the inhibition of CD36-mediated lipid uptake. SAB reduced modified LDL (mLDL) uptake in a dose-dependent manner in phorbol-12-myristate-13-acetate (PMA)-stimulated THP-1 and RAW 264.7 cells. In the CD36 silenced THP-1 cells, SAB had no effect in reducing mLDL uptake, whereas its over-expression in CHO cells reinstates the effect, indicating a specific involvement of SAB in antagonizing the CD36's function. Surface plasmon resonance (SPR) analysis revealed a direct binding of SAB to CD36 with a high affinity (KD =3.74 μM), confirming physical interactions of SAB with the receptor. Additionally, SAB reduced oxLDL-induced CD36 gene expression in the cultured cell lines and primary macrophages. In ApoE KO mice fed a high fat diet, SAB reduced CD36 gene expression and lipid uptake in macrophages, showing its ability to antagonize CD36 pathways in vivo. These results demonstrate that SAB is an effective CD36 antagonist and suggest SAB as a potential anti-atherosclerotic agent. PMID:22658257

  9. Association between rs1761667 polymorphism of CD36 gene and risk of coronary atherosclerosis in Egyptian population

    Science.gov (United States)

    Arafa, Usama Ahmed; Sabet, Eman A.; Salama, Eman; El Sharawy, Ahmed; Elbadry, Mahmoud I.

    2016-01-01

    Background Recent studies have demonstrated that CD36 is involved in the progression of atherosclerosis. Associations between rs1761667 polymorphisms of the CD36 gene and susceptibility to coronary artery disease (CAD) are not obvious. Methods We studied the relationship between single nucleotide polymorphisms (SNPs), rs1761667 of CD36 gene and the risk of coronary atherosclerosis in a case-control study composed of 71 CAD patients and 76 healthy controls by assessment of allele frequencies and genotype distributions using real-time polymerase chain reaction (PCR) and the allele discrimination technique. Additionally, we detected CD36 expression by flow cytometry. Results The distribution of rs1761667 genotypes between the two groups was significantly different (P<0.001), with the frequency of the AG genotype being significantly higher in the CAD group than in the control group (P<0.001). The expression level of CD36 in the CAD group was significantly higher than that in the control group (P<0.001), with significant differences in the CAD patients with an AG genotype compared with those with an AA and GG genotype (P<0.001). The plasma levels (mg/dL) of low-density lipoprotein (LDL) in the CAD group were much higher than that in the control group (P<0.001). On the other hand, the plasma LDL levels in CAD patients with the AG genotype were remarkably higher than those with the GG and AA genotypes (P=0.046) and AG genotype was significantly more prevalent among type 2 diabetes mellitus (T2DM) and metabolic syndrome (MetS) patients (P<0.05). After adjusted logistic regression analysis, the AG genotype of rs1761667 was associated with an increased risk of CAD (OR=17.97, 95% CI, 3.19–87.85, P=0.001). Conclusions The AG genotype of the rs1761667 polymorphism in the CD36 gene may be involved in CAD pathogenesis as well as increased body mass index (BMI), T2DM and MetS in the Sohag population of Egypt. PMID:27054101

  10. Obesity alters the gustatory perception of lipids in the mouse: plausible involvement of lingual CD36[S

    Science.gov (United States)

    Chevrot, Michael; Bernard, Arnaud; Ancel, Déborah; Buttet, Marjorie; Martin, Céline; Abdoul-Azize, Souleymane; Merlin, Jean-François; Poirier, Hélène; Niot, Isabelle; Khan, Naim Akhtar; Passilly-Degrace, Patricia; Besnard, Philippe

    2013-01-01

    A relationship between orosensory detection of dietary lipids, regulation of fat intake, and body mass index was recently suggested. However, involved mechanisms are poorly understood. Moreover, whether obesity can directly modulate preference for fatty foods remains unknown. To address this question, exploration of the oral lipid sensing system was undertaken in diet-induced obese (DIO) mice. By using a combination of biochemical, physiological, and behavioral approaches, we found that i) the attraction for lipids is decreased in obese mice, ii) this behavioral change has an orosensory origin, iii) it is reversed in calorie-restricted DIO mice, revealing an inverse correlation between fat preference and adipose tissue size, iv) obesity suppresses the lipid-mediated downregulation of the lipid-sensor CD36 in circumvallate papillae, usually found during the refeeding of lean mice, and v) the CD36-dependent signaling cascade controlling the intracellular calcium levels ([Ca2+]i) in taste bud cells is decreased in obese mice. Therefore, obesity alters the lipid-sensing system responsible for the oral perception of dietary lipids. This phenomenon seems to take place through a CD36-mediated mechanism, leading to changes in eating behavior. PMID:23840049

  11. Antagonism of scavenger receptor CD36 by 5A peptide prevents chronic kidney disease progression in mice independent of blood pressure regulation.

    Science.gov (United States)

    Souza, Ana Carolina P; Bocharov, Alexander V; Baranova, Irina N; Vishnyakova, Tatyana G; Huang, Yuning G; Wilkins, Kenneth J; Hu, Xuzhen; Street, Jonathan M; Alvarez-Prats, Alejandro; Mullick, Adam E; Patterson, Amy P; Remaley, Alan T; Eggerman, Thomas L; Yuen, Peter S T; Star, Robert A

    2016-04-01

    Scavenger receptor CD36 participates in lipid metabolism and inflammatory pathways important for cardiovascular disease and chronic kidney disease (CKD). Few pharmacological agents are available to slow the progression of CKD. However, apolipoprotein A-I-mimetic peptide 5A antagonizes CD36 in vitro. To test the efficacy of 5A, and to test the role of CD36 during CKD, we compared wild-type to CD36 knockout mice and wild-type mice treated with 5A, in a progressive CKD model that resembles human disease. Knockout and 5A-treated wild-type mice were protected from CKD progression without changes in blood pressure and had reductions in cardiovascular risk surrogate markers that are associated with CKD. Treatment with 5A did not further protect CD36 knockout mice from CKD progression, implicating CD36 as its main site of action. In a separate model of kidney fibrosis, 5A-treated wild-type mice had less macrophage infiltration and interstitial fibrosis. Peptide 5A exerted anti-inflammatory effects in the kidney and decreased renal expression of inflammasome genes. Thus, CD36 is a new therapeutic target for CKD and its associated cardiovascular risk factors. Peptide 5A may be a promising new agent to slow CKD progression.

  12. Clearance of Apoptotic Cells by Macrophages Induces Regulatory Phenotype and Involves Stimulation of CD36 and Platelet-Activating Factor Receptor

    Directory of Open Access Journals (Sweden)

    Matheus Ferracini

    2013-01-01

    Full Text Available Phagocytosis of apoptotic cells (efferocytosis induces macrophage differentiation towards a regulatory phenotype (IL-10high/IL-12p40low. CD36 is involved in the recognition of apoptotic cells (AC, and we have shown that the platelet-activating factor receptor (PAFR is also involved. Here, we investigated the contribution of PAFR and CD36 to efferocytosis and to the establishment of a regulatory macrophage phenotype. Mice bone marrow-derived macrophages were cocultured with apoptotic thymocytes, and the phagocytic index was determined. Blockage of PAFR with antagonists or CD36 with specific antibodies inhibited the phagocytosis of AC (~70–80%. Using immunoprecipitation and confocal microscopy, we showed that efferocytosis increased the CD36 and PAFR colocalisation in the macrophage plasma membrane; PAFR and CD36 coimmunoprecipitated with flotillin-1, a constitutive lipid raft protein, and disruption of these membrane microdomains by methyl-β-cyclodextrin reduced AC phagocytosis. Efferocytosis induced a pattern of cytokine production, IL-10high/IL-12p40low, that is, characteristic of a regulatory phenotype. LPS potentiated the efferocytosis-induced production of IL-10, and this was prevented by blocking PAFR or CD36. It can be concluded that phagocytosis of apoptotic cells engages CD36 and PAFR, possibly in lipid rafts, and this is required for optimal efferocytosis and the establishment of the macrophage regulatory phenotype.

  13. Low Levels of CD36 in Peripheral Blood Monocytes in Subclinical Atherosclerosis in Rheumatoid Arthritis: A Cross-Sectional Study in a Mexican Population

    Directory of Open Access Journals (Sweden)

    Eduardo Gómez-Bañuelos

    2014-01-01

    Full Text Available Patients with rheumatoid arthritis (RA have a higher risk for atherosclerosis. There is no clinical information about scavenger receptor CD36 and the development of subclinical atherosclerosis in patients with RA. The aim of this study was to evaluate the association between membrane expression of CD36 in peripheral blood mononuclear cells (PBMC and carotid intima-media thickness (cIMT in patients with RA. Methods. We included 67 patients with RA from the Rheumatology Department of Hospital Civil “Dr. Juan I. Menchaca,” Guadalajara, Jalisco, Mexico. We evaluated the cIMT, considering subclinical atherosclerosis when >0.6 mm. Since our main objective was to associate the membrane expression of CD36 with subclinical atherosclerosis, other molecules related with cardiovascular risk such as ox-LDL, IL-6, and TNFα were tested. Results. We found low CD36 membrane expression in PBMC from RA patients with subclinical atherosclerosis (P<0.001. CD36 mean fluorescence intensity had negative correlations with cIMT (r = −0.578, P<0.001, ox-LDL (r = −0.427, P = 0.05, TNFα (r = −0.729, P<0.001, and IL-6 (r = −0.822, P<0.001. Conclusion. RA patients with subclinical atherosclerosis showed low membrane expression of CD36 in PBMC and increased serum proinflammatory cytokines. Further studies are needed to clarify the regulation of CD36 in RA.

  14. CD36/SR-B2-TLR2 Dependent Pathways Enhance Porphyromonas gingivalis Mediated Atherosclerosis in the Ldlr KO Mouse Model.

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    Paul M Brown

    Full Text Available There is strong epidemiological association between periodontal disease and cardiovascular disease but underlying mechanisms remain ill-defined. Because the human periodontal disease pathogen, Porphyromonas gingivalis (Pg, interacts with innate immune receptors Toll-like Receptor (TLR 2 and CD36/scavenger receptor-B2 (SR-B2, we studied how CD36/SR-B2 and TLR pathways promote Pg-mediated atherosclerosis. Western diet fed low density lipoprotein receptor knockout (Ldlr° mice infected orally with Pg had a significant increase in lesion burden compared with uninfected controls.This increase was entirely CD36/SR-B2-dependent, as there was no significant change in lesion burden between infected and uninfected Cd36o/Ldlro mice [corrected]. Western diet feeding promoted enhanced CD36/SR-B2-dependent IL1β generation and foam cell formation as a result of Pg lipopolysaccharide (PgLPS exposure. CD36/SR-B2 and TLR2 were necessary for inflammasome activation and optimal IL1ß generation, but also resulted in LPS induced lethality (pyroptosis. Modified forms of LDL inhibited Pg-mediated IL1ß generation in a CD36/SR-B2-dependent manner and prevented pyroptosis, but promoted foam cell formation. Our data show that Pg infection in the oral cavity can lead to significant TLR2-CD36/SR-B2 dependent IL1ß release. In the vessel wall, macrophages encountering systemic release of IL1ß, PgLPS and modified LDL have increased lipid uptake, foam cell formation, and release of IL1ß, but because pyroptosis is inhibited, this enables macrophage survival and promotes increased plaque development. These studies may explain increased lesion burden as a result of periodontal disease, and suggest strategies for development of therapeutics.

  15. Low Levels of CD36 in Peripheral Blood Monocytes in Subclinical Atherosclerosis in Rheumatoid Arthritis: A Cross-Sectional Study in a Mexican Population

    OpenAIRE

    Eduardo Gómez-Bañuelos; Beatriz Teresita Martín-Márquez; Erika Aurora Martínez-García; Mauricio Figueroa-Sanchez; Lourdes Nuñez-Atahualpa; Alberto Daniel Rocha-Muñoz; Pedro Ernesto Sánchez-Hernández; Rosa Elena Navarro-Hernandez; Perla Monserrat Madrigal-Ruiz; Adan Alberto Saldaña-Millan; Sergio Duran-Barragan; Laura Gonzalez-Lopez; Jorge Ivan Gamez-Nava; Mónica Vázquez-Del Mercado

    2014-01-01

    Patients with rheumatoid arthritis (RA) have a higher risk for atherosclerosis. There is no clinical information about scavenger receptor CD36 and the development of subclinical atherosclerosis in patients with RA. The aim of this study was to evaluate the association between membrane expression of CD36 in peripheral blood mononuclear cells (PBMC) and carotid intima-media thickness (cIMT) in patients with RA. Methods. We included 67 patients with RA from the Rheumatology Department of Hospita...

  16. CD36 is not involved in scavenger receptor-mediated endocytic uptake of glycolaldehyde- and methylglyoxal-modified proteins by liver endothelial cells.

    Science.gov (United States)

    Nakajou, Keisuke; Horiuchi, Seikoh; Sakai, Masakazu; Hirata, Kenshiro; Tanaka, Makiko; Takeya, Motohiro; Kai, Toshiya; Otagiri, Masaki

    2005-05-01

    Circulating proteins modified by advanced glycation end-products (AGE) are mainly taken up by liver endothelial cells (LECs) via scavenger receptor-mediated endocytosis. Endocytic uptake of chemically modified proteins by macrophages and macrophage-derived cells is mediated by class A scavenger receptor (SR-A) and CD36. In a previous study using SR-A knockout mice, we demonstrated that SR-A is not involved in endocytic uptake of AGE proteins by LECs [Matsumoto et al. (2000) Biochem. J. 352, 233-240]. The present study was conducted to determine the contribution of CD36 to this process. Glycolaldehyde-modified BSA (GA-BSA) and methylglyoxal-modified BSA (MG-BSA) were used as AGE proteins. 125I-GA-BSA and 125I-MG-BSA underwent endocytic degradation by these cells at 37 degrees C, and this process was inhibited by several ligands for the scavenger receptors. However, this endocytic uptake of 125I-GA-BSA by LECs was not inhibited by a neutralizing anti-CD36 antibody. Similarly, hepatic uptake of (111)In-GA-BSA after its intravenous injection was not significantly attenuated by co-administration of the anti-CD36 antibody. These results clarify that CD36 does not play a significant role in elimination of GA-BSA and MG-BSA from the circulation, suggesting that the receptor involved in endocytic uptake of circulating AGE proteins by LEC is not SR-A or CD36.

  17. The human CD5L/AIM-CD36 axis: A novel autophagy inducer in macrophages that modulates inflammatory responses.

    Science.gov (United States)

    Sanjurjo, Lucía; Amézaga, Núria; Aran, Gemma; Naranjo-Gómez, Mar; Arias, Lilibeth; Armengol, Carolina; Borràs, Francesc E; Sarrias, Maria-Rosa

    2015-01-01

    CD5L (CD5 molecule-like) is a secreted glycoprotein that participates in host response to bacterial infection. CD5L influences the monocyte inflammatory response to the bacterial surface molecules lipopolysaccharide (LPS) and lipoteichoic acid (LTA) by inhibiting TNF secretion. Here we studied the intracellular events that lead to macrophage TNF inhibition by human CD5L. To accomplish this goal, we performed functional analyses with human monocytic THP1 macrophages, as well as with peripheral blood monocytes. Inhibition of phosphatidylinositol 3-kinase (PtdIns3K) reversed the inhibitory effect of CD5L on TNF secretion. Among the various PtdIns3K isoforms, our results indicated that CD5L activates PtdIns3K (whose catalytic subunit is termed PIK3C3), a key modulator involved in autophagy. Further analysis revealed a concomitant enhancement of autophagy markers such as cellular LC3-II content, increased LC3 puncta, as well as LC3-LysoTracker Red colocalization. Moreover, electron microscopy showed an increased presence of cytosolic autophagosomes in THP1 macrophages overexpressing CD5L. Besides preventing TNF secretion, CD5L also inhibited IL1B and enhanced IL10 secretion. This macrophage anti-inflammatory pattern of CD5L was reverted upon silencing of autophagy protein ATG7 by siRNA transfection. Additional siRNA experiments in THP1 macrophages indicated that the induction of autophagy mechanisms by CD5L was achieved through cell-surface scavenger receptor CD36, a multiligand receptor expressed in a wide variety of cell types. Our data represent the first evidence that CD36 is involved in autophagy and point to a significant contribution of the CD5L-CD36 axis to the induction of macrophage autophagy.

  18. Suppression of FAT/CD36 mRNA by human growth hormone in pancreatic β-cells

    DEFF Research Database (Denmark)

    Dalgaard, Louise Torp; Thams, Peter Grevsen; Gaarn, Louise Winkel;

    2011-01-01

    of this study was to examine the effect of human growth hormone (hGH) on mRNAs of fatty acid transport and binding proteins expressed in pancreatic β-cells, and to examine this in relation to β-cell survival after exposure to fatty acids. hGH decreased mRNA levels of FAT/CD36, whereas mRNAs of GPR40, FASN, FABP......Fatty acid-induced damage in pancreatic β-cells is assumed to play an important role in the development of type 2 diabetes. Lactogens (prolactin, placental lactogen and growth hormone) improve β-cell survival via STAT5 activation but the molecular targets are incompletely characterized. The aim...

  19. Suppression of FAT/CD36 mRNA by human growth hormone in pancreatic ß-cells

    DEFF Research Database (Denmark)

    Dalgaard, Louise Torp; Thams, Peter Grevsen; Gaarn, Louise Winkel;

    2011-01-01

    of this study was to examine the effect of human growth hormone (hGH) on mRNAs of fatty acid transport and binding proteins expressed in pancreatic ß-cells, and to examine this in relation to ß-cell survival after exposure to fatty acids. hGH decreased mRNA levels of FAT/CD36, whereas mRNAs of GPR40, FASN, FABP......Fatty acid-induced damage in pancreatic ß-cells is assumed to play an important role in the development of type 2 diabetes. Lactogens (prolactin, placental lactogen and growth hormone) improve ß-cell survival via STAT5 activation but the molecular targets are incompletely characterized. The aim...

  20. Oily Fish Consumption Modifies the Association between CD36 rs6969989 Polymorphism and Lipid Profiles in Korean Women

    Science.gov (United States)

    Shin, Yoonjin; Kim, Yangha

    2016-01-01

    The aim of this study was to investigate the association of CD36, a class B scavenger receptor, rs6969989 polymorphism with the serum lipid profiles in Korean women, together with their modulation by oily fish consumption. Subjects were participants from the Korean Genome Epidemiology Study (KoGES), which was initiated in 2001 as a large-scale. A total of 4,210 women aged 39 to 70 were included in this study. Data were collected using self-administered questionnaires, anthropometric measurements, and blood chemical analysis. Dietary intake was analyzed using a semi-quantitative food frequency questionnaire. The minor allele frequency for rs6969989 was found in 12% of this population. Homozygotes minor G allele at the rs6868989 exhibited significantly higher high density lipoprotein cholesterol (HDL-C) concentrations (P-trend=0.043) and lower fasting glucose (P-trend=0.013) than major allele A carriers. The risk of low HDL-C was significantly lower in homozygotes for the G allele than the A allele carriers (P-trend=0.032). Gene-diet interaction effects between rs6969989 and oily fish intake were significantly associated with the risk of dyslipidemia (P-interaction= 0.004). Subjects with homozygotes minor G allele and high oily fish intake generally had a lower risk of dyslipidemia than did those with major allele homozygotes and low oily fish intake. These findings supported that oily fish consumption may modulate the contributions of CD36 rs6969989 on genetic predisposition to the risk of dyslipidemia. PMID:27752496

  1. Parasite burden and CD36-mediated sequestration are determinants of acute lung injury in an experimental malaria model.

    Directory of Open Access Journals (Sweden)

    Fiona E Lovegrove

    2008-05-01

    Full Text Available Although acute lung injury (ALI is a common complication of severe malaria, little is known about the underlying molecular basis of lung dysfunction. Animal models have provided powerful insights into the pathogenesis of severe malaria syndromes such as cerebral malaria (CM; however, no model of malaria-induced lung injury has been definitively established. This study used bronchoalveolar lavage (BAL, histopathology and gene expression analysis to examine the development of ALI in mice infected with Plasmodium berghei ANKA (PbA. BAL fluid of PbA-infected C57BL/6 mice revealed a significant increase in IgM and total protein prior to the development of CM, indicating disruption of the alveolar-capillary membrane barrier-the physiological hallmark of ALI. In contrast to sepsis-induced ALI, BAL fluid cell counts remained constant with no infiltration of neutrophils. Histopathology showed septal inflammation without cellular transmigration into the alveolar spaces. Microarray analysis of lung tissue from PbA-infected mice identified a significant up-regulation of expressed genes associated with the gene ontology categories of defense and immune response. Severity of malaria-induced ALI varied in a panel of inbred mouse strains, and development of ALI correlated with peripheral parasite burden but not CM susceptibility. Cd36(-/- mice, which have decreased parasite lung sequestration, were relatively protected from ALI. In summary, parasite burden and CD36-mediated sequestration in the lung are primary determinants of ALI in experimental murine malaria. Furthermore, differential susceptibility of mouse strains to malaria-induced ALI and CM suggests that distinct genetic determinants may regulate susceptibility to these two important causes of malaria-associated morbidity and mortality.

  2. The effect of albumin on podocytes: The role of the fatty acid moiety and the potential role of CD36 scavenger receptor

    Energy Technology Data Exchange (ETDEWEB)

    Pawluczyk, I.Z.A., E-mail: izap1@le.ac.uk [Department of Infection, Immunity and inflammation, University of Leicester, Leicester (United Kingdom); John Walls Renal Unit, Leicester General Hospital Leicester (United Kingdom); Pervez, A.; Ghaderi Najafabadi, M. [Department of Infection, Immunity and inflammation, University of Leicester, Leicester (United Kingdom); Saleem, M.A. [Academic and Children' s Renal Unit, University of Bristol, Southmead Hospital, Bristol (United Kingdom); Topham, P.S. [Department of Infection, Immunity and inflammation, University of Leicester, Leicester (United Kingdom); John Walls Renal Unit, Leicester General Hospital Leicester (United Kingdom)

    2014-08-15

    Evidence is emerging that podocytes are able to endocytose proteins such as albumin using kinetics consistent with a receptor-mediated process. To date the role of the fatty acid moiety on albumin uptake kinetics has not been delineated and the receptor responsible for uptake is yet to be identified. Albumin uptake studies were carried out on cultured human podocytes exposed to FITC-labelled human serum albumin either carrying fatty acids (HSA{sub +FA}) or depleted of them (HSA{sub −FA}). Receptor-mediated endocytosis of FITC-HSA{sub +FA} over 60 min was 5 times greater than that of FITC-HSA{sub −FA}. 24 h exposure of podocytes to albumin up-regulated nephrin expression and induced the activation of caspase-3. These effects were more pronounced in response to HSA{sub −FA.} Individually, anti-CD36 antibodies had no effect upon endocytosis of FITC-HSA. However, a cocktail of 2 antibodies reduced uptake by nearly 50%. Albumin endocytosis was enhanced in the presence of the CD36 specific inhibitor sulfo-N-succinimidyl oleate (SSO) while knock-down of CD36 using CD36siRNA had no effect on uptake. These data suggest that receptor-mediated endocytosis of albumin by podocytes is regulated by the fatty acid moiety, although, some of the detrimental effects are induced independently of it. CD36 does not play a direct role in the uptake of albumin. - Highlights: • The fatty acid moiety is essential for receptor mediated endocytosis of albumin. • Fatty acid depleted albumin is more pathogenic to podocytes. • CD36 is not directly involved in albumin uptake by podocytes.

  3. Mitigation of Insulin Resistance by Mangiferin in a Rat Model of Fructose-Induced Metabolic Syndrome Is Associated with Modulation of CD36 Redistribution in the Skeletal Muscle.

    Science.gov (United States)

    Zhou, Liang; Pan, Yongquan; Chonan, Ritsu; Batey, Robert; Rong, Xianglu; Yamahara, Johji; Wang, Jianwei; Li, Yuhao

    2016-01-01

    Mangiferin is one of the prominent active components responsible for the antidiabetic property of many traditional herbs, but its underlying mechanisms of action remain unclear. CD36 in skeletal muscle is known to contribute to the etiology of insulin resistance by facilitating fatty acid uptake. This study investigated the effect of mangiferin on insulin resistance. The results showed that treatment of Wistar-Kyoto rats with mangiferin (15 mg/kg, once daily, by oral gavage) for 7 weeks inhibited chronic liquid fructose consumption-induced increases in plasma insulin concentrations at the baseline and during oral glucose tolerance test (OGTT), and the homeostasis model assessment of insulin resistance index. It also suppressed the increases in fasted plasma nonesterified fatty acid (NEFA) concentration and the adipose tissue insulin resistance index. Mechanistically, mangiferin neither affected intakes of fructose and chow, and the increase in epididymal and perirenal fat, nor attenuated fructose-induced hypertension. In contrast, mangiferin attenuated fructose-induced acceleration of plasma NEFA clearance during OGTT, and tended to decrease excessive triglyceride accumulation in gastrocnemius. Immunofluorescence staining and subsequent rating of CD36-expressing fibers in gastrocnemius revealed that mangiferin restored fructose-stimulated sarcolemmal CD36 overexpression and decreased intracellular CD36 distribution. In addition, the effects of mangiferin on the parameters associated with insulin resistance and abnormal fatty acid metabolism were absent in the spontaneously hypertensive rats carrying numerous nonfunctional mutations in the CD36 gene. Thus, these results suggest that mangiferin treatment mitigates insulin resistance in a rat model of fructose-induced metabolic syndrome by modulating sarcolemmal and intracellular CD36 redistribution in the skeletal muscle.

  4. The association between platelet CD36 expression and risk of acute pulmonary embolism in patients undergoing total knee arthroplasty surgery%血小板CD36与膝关节置换术后发生急性肺栓塞的相关因素

    Institute of Scientific and Technical Information of China (English)

    覃巍; 郭青; 左康康; 廉凯

    2016-01-01

    Objective To study the association between platelet CD36 and acute pulmonary embolism( APE) in pa-tients after total knee arthroplasty ( TKA ) . Methods A total of 50 patients with APE and 150 non-APE patients simuleaneously were included, and baseline data were compared in this study. Results Age, anticoagulant use, to-tal cholesterol (TC), triglyceride (TG), low density lipoprotein cholesterin (LDL-C) and D dimer (D-D) in pa-tients with APE had statistical differences compared with non-APE patients ( P<0. 05 ) , and the platelet CD36 ex-pression in patients with APE was higher than non-APE patients ( P<0. 05 ) . In Logistic regression analysis, age, anticoagulants use, D-D and platelet CD36 were close associated with APE. ROC curve analysis results showed that higher platelet CD36 expression had well diagnostic value for APE with patients of the area under the curve of 0. 821 (95%CI:0. 749~0. 892, P<0. 001), the sensitivity and specificity was 81. 6% and 71. 5%,respectively. Con-clusions The expression of platelet CD36 is high in APE patients, and higher CD36 expression in platelet is risk factors of APE after undergoing TKA, platelet CD36 has certain clinical value for preventing APE after TKA.%目的:探讨血小板CD36的表达与行全膝关节置换术( TKA)患者术后发生急性肺栓塞( APE)的关系。方法选取50例TKA术后发生APE患者和同期150例TKA术后未发生APE和血栓患者进行基本资料比较。结果两组患者年龄、抗凝剂使用、总胆固醇(TC)、低密度脂蛋白胆固醇(LDL-C)、甘油三酯(TG)以及D-二聚体(D-D)比较差异均有统计学意义(P<0.05)。血小板CD36在APE患者中明显高表达,差异有统计学意义(P<0.05)。在Logistic回归分析中,年龄、抗凝剂的使用、D-D以及血小板CD36的异常表达与APE发生密切相关。 ROC曲线分析结果显示,血小板CD36的高表达在对于TKA术后发生APE具有较好的诊断价值,曲线下面积为0.821(95% CI 0.749~0

  5. PPARγ-induced upregulation of CD36 enhances hematoma resolution and attenuates long-term neurological deficits after germinal matrix hemorrhage in neonatal rats.

    Science.gov (United States)

    Flores, Jerry J; Klebe, Damon; Rolland, William B; Lekic, Tim; Krafft, Paul R; Zhang, John H

    2016-03-01

    Germinal matrix hemorrhage remains the leading cause of morbidity and mortality in preterm infants in the United States with little progress made in its clinical management. Survivors are often afflicted with long-term neurological sequelae, including cerebral palsy, mental retardation, hydrocephalus, and psychiatric disorders. Blood clots disrupting normal cerebrospinal fluid circulation and absorption after germinal matrix hemorrhage are thought to be important contributors towards post-hemorrhagic hydrocephalus development. We evaluated if upregulating CD36 scavenger receptor expression in microglia and macrophages through PPARγ stimulation, which was effective in experimental adult cerebral hemorrhage models and is being evaluated clinically, will enhance hematoma resolution and ameliorate long-term brain sequelae using a neonatal rat germinal matrix hemorrhage model. PPARγ stimulation (15d-PGJ2) increased short-term PPARγ and CD36 expression levels as well as enhanced hematoma resolution, which was reversed by a PPARγ antagonist (GW9662) and CD36 siRNA. PPARγ stimulation (15d-PGJ2) also reduced long-term white matter loss and post-hemorrhagic ventricular dilation as well as improved neurofunctional outcomes, which were reversed by a PPARγ antagonist (GW9662). PPARγ-induced upregulation of CD36 in macrophages and microglia is, therefore, critical for enhancing hematoma resolution and ameliorating long-term brain sequelae.

  6. Tet38 Efflux Pump Affects Staphylococcus aureus Internalization by Epithelial Cells through Interaction with CD36 and Contributes to Bacterial Escape from Acidic and Nonacidic Phagolysosomes.

    Science.gov (United States)

    Truong-Bolduc, Q C; Khan, N S; Vyas, J M; Hooper, D C

    2017-02-01

    We previously reported that the Tet38 efflux pump is involved in internalization of Staphylococcus aureus by A549 lung epithelial cells. A lack of tet38 reduced bacterial uptake by A549 cells to 36% of that of the parental strain RN6390. Using invasion assays coupled with confocal microscopy imaging, we studied the host cell receptor(s) responsible for bacterial uptake via interaction with Tet38. We also assessed the ability of S. aureus to survive following alkalinization of the phagolysosomes by chloroquine. Antibody to the scavenger receptor CD36 reduced the internalization of S. aureus RN6390 by A549 cells, but the dependence on CD36 was reduced in QT7 tet38, suggesting that an interaction between Tet38 and CD36 contributed to S. aureus internalization. Following fusion of the S. aureus-associated endosomes with lysosomes, alkalinization of the acidic environment with chloroquine led to a rapid increase in the number of S. aureus RN6390 bacteria in the cytosol, followed by a decrease shortly thereafter. This effect of chloroquine was not seen in the absence of intact Tet38 in mutant QT7. These data taken together suggest that Tet38 plays a role both in bacterial internalization via interaction with CD36 and in bacterial escape from the phagolysosomes.

  7. The excreted polysaccharide of Pleurotus eryngii inhibits the foam-cell formation via down-regulation of CD36.

    Science.gov (United States)

    Chen, Jingjing; Yong, Yangyang; Xia, Xian; Wang, Zeliang; Liang, Youxing; Zhang, Shizhu; Lu, Ling

    2014-11-04

    Previous study has verified the polysaccharide from the fruiting body of Pleurotus eryngii (PEPE) is capable of decreasing the lipid content in both of cell-line and mouse model. However, little is known about underlying mechanisms and whether this bioactive polysaccharide exists in submerged culture. Here, we verified the excreted polysaccharides EP and EP-1 from submersion culture of P. eryngii have the remarkable inhibitory effects on lipid accumulation in macrophage-derived foam cells. Structure analysis indicates EP-1 consists of D-types of glucose, galactose and mannose with the main β(1 → 3)-glucan glycosidic linkage branched at O-6 by α-D-glucose while EP digested by β-1,3-glucanase fails to decrease the lipid accumulation, suggesting that the special structure is essential for its function. Expression analysis suggests that EP is able to cause the down-regulation of the scavenger receptor-CD36 on both transcription and protein levels. Most importantly, EP can be obtained by fermentation in a mass-production.

  8. Phagocytosis of cholesteryl ester is amplified in diabetic mouse macrophages and is largely mediated by CD36 and SR-A.

    Directory of Open Access Journals (Sweden)

    Christopher B Guest

    Full Text Available Type 2 diabetes (T2D is associated with accelerated atherosclerosis, which accounts for approximately 75% of all diabetes-related deaths. Here we investigate the link between diabetes and macrophage cholesteryl ester accumulation. When diabetic (db/db mice are given cholesteryl ester intraperitoneally (IP, peritoneal macrophages (PerMPhis recovered from these animals showed a 58% increase in intracellular cholesteryl ester accumulation over PerMPhis from heterozygote control (db/+ mice. Notably, PerMPhi fluid-phase endocytosis and large particle phagocytosis was equivalent in db/+and db/db mice. However, IP administration of CD36 and SR-A blocking antibodies led to 37% and 25% reductions in cholesteryl ester accumulation in PerMPhi. Finally, in order to determine if these scavenger receptors (SRs were part of the mechanism responsible for the increased accumulation of cholesteryl esters observed in the diabetic mouse macrophages, receptor expression was quantified by flow cytometry. Importantly, db/db PerMPhis showed a 43% increase in CD36 expression and an 80% increase in SR-A expression. Taken together, these data indicate that direct cholesteryl ester accumulation in mouse macrophages is mediated by CD36 and SR-A, and the magnitude of accumulation is increased in db/db macrophages due to increased scavenger receptor expression.

  9. Pharmacogenetic interaction between dexamethasone and Cd36-deficient segment of spontaneously hypertensive rat chromosome 4 affects triacylglycerol and cholesterol distribution into lipoprotein fractions.

    Science.gov (United States)

    Krupková, Michaela; Sedová, Lucie; Liska, Frantisek; Krenová, Drahomíra; Kren, Vladimír; Seda, Ondrej

    2010-04-16

    Dexamethasone (DEX) is known to induce diabetes and dyslipidemia. We have compared fasting triacylglycerol and cholesterol concentrations across 20 lipoprotein fractions and glucose tolerance in control (standard diet) and DEX-treated 7-month-old males of two rat strains, Brown Norway (BN) and congenic BN.SHR-(Il6-Cd36)/Cub (BN.SHR4). These two inbred strains differ in a defined segment of chromosome 4, originally transferred from the spontaneously hypertensive rat (SHR) including the mutant Cd36 gene, a known target of DEX. Compared to BN, the standard-diet-fed BN.SHR4 showed higher cholesterol and triacylglycerol concentrations across many lipoprotein fractions, particularly in small VLDL and LDL particles. Total cholesterol was decreased by DEX by more than 21% in BN.SHR4 contrasting with the tendency to increase in BN (strain*DEX interaction p = 0.0017). Similar pattern was observed for triacylglycerol concentrations in LDL. The LDL particle size was significantly reduced by DEX in both strains. Also, while control BN and BN.SHR4 displayed comparable glycaemic profiles during oral glucose tolerance test, we observed a markedly blunted DEX induction of glucose intolerance in BN.SHR4 compared to BN. In summary, we report a pharmacogenetic interaction between limited genomic segment with mutated Cd36 gene and dexamethasone-induced glucose intolerance and triacylglycerol and cholesterol redistribution into lipoprotein fractions.

  10. 孕期炎症刺激对子代小鼠脂质代谢及 FAT/CD36表达的影响%Prenatal exposure to lipopolysaccharide results in lipid metabolism and FAT/CD36 expression in mice offspring

    Institute of Scientific and Technical Information of China (English)

    秦书刚; 陈新; 贾乙; 周见至; 苏敏; 李晓辉

    2016-01-01

    Aim To explore the effect of prenatal expo-sure to lipopolysaccharide ( LPS ) on lipid metabolism in mice offspring from the starting point of FAT/CD36 expression.Methods 8-week old C57 mice mated 2∶1, then they were caged separately , marked as preg-nancy 0 d.The pregnant mice were given single intrap-eritoneal injection of 75 μg・ kg -1 LPS, and the con-trol received injections of 0.2 mL saline .The perirenal adipose of female mice and epididymis adipose of male mice were collected in 4 w,8 w,12 w,respectively. The weight of visceral adipose tissue and the free fatty acid( FFA) and triglyceride ( TG) of adipose tissue and FAT/CD36 of offspring mice were quantitated .Results The body weight of offspring of LPS group was also significantly higher than that of NS group , and LPS group offspring displayed increased adipose tissue wet weights , the expression of TG and FFA was increased in LPS group compared with NS .Especially , prenatal exposure to inflammatory stimulation resulted in marked increase of FAT/CD36 and abnormal adipocyte development .Conclusions Inflammation induced by prenatal exposure to LPS results in increased body weight , adipose coefficient and FAT/CD36 that might develop into obesity in adult mice .These results are relevant in that anomalous local adipose tissue and FAT/CD36 regulation may be an important mechanism underlying obesity .%目的:以FAT/CD36为切入点,研究母体孕期炎症刺激对子代脂质代谢的影响。方法8周龄C57小鼠,♀♂2∶1合笼配种,d 2♀鼠分笼饲养记为在孕0 d,在孕11 d给予孕鼠一次性腹腔注射脂多糖(LPS)(75μg・ kg-1),对照组注射0.2 mL的生理盐水。分别于子鼠4、8、12周取材(♀鼠取肾周脂肪、♂鼠取附睾周围脂肪),对子代小鼠体重、内脏脂肪重量、脂肪组织和细胞中游离脂肪酸( FFA)、甘油三酯( TG)、FAT/CD36表达量进行检测。结果与NS组相比, LPS组小鼠体重、内

  11. Impact of anti-OX-LDL antibodies on CD36 mRNA expression in monocytes%氧化型低密度脂蛋白抗体对单个核细胞CD36 mRNA表达的影响

    Institute of Scientific and Technical Information of China (English)

    王磊; 宫剑滨; 王璟; 张启高; 王立军

    2012-01-01

    目的:通过观察氧化型低密度脂蛋白(OX-LDL)抗体对单个核细胞CD36 mRNA表达的影响,探讨OX-LDL抗体影响泡沫细胞形成的可能机制.方法:U937细胞和新西兰兔外周血单个核细胞分别被分成4组:空白对照组(普通培养基孵育)、OX-LDL刺激组(培养基中添加50μg/L的兔抗人OX-LDL多克隆抗体)、抗体干预组(培养基中添加50 μg/L的兔抗人OX-LDL多克隆抗体及100 μg/L的纯化人OX-LDL)及单纯抗体组(培养基中添加100 μg/L的纯化人OX-LDL),经培养24 h后,利用半定量RT-PCR技术分析CD36的mRNA表达水平.结果:无论在U937细胞或兔单个核细胞中,OX-LDL刺激组及抗体干预组CD36 mRNA的表达量均显著高于对照组,而经抗体干预后,CD36 mRNA表达量在U937细胞和在兔单个核细胞分别降低了约64.80%和35.18%,种属间差异有统计学意义.结论:抗OX-LDL抗体可以抑制单个核细胞CD36抗原的表达,从而抑制泡沫细胞形成过程中OX-LDL向细胞内的聚集.%AIM: To investigate the impact of antibodies to oxidized low-density lipoprotein ( OX-LDL) on CD36 mRNA expression in monocytes and explore the mechanism underlying the impact on the formation of foam cells. METHODS; U937 cells and the monocytes of New Zealand rabbit were respectively cultured in vitro and divided into 4 groups: the control group (cultured in nutrient medium of RPMI1640), the OX-LDL group (with additional OX-LDL of 50 uc/L in nutrient medium), the OX-LDL + Ab-OX-LDL group (with additional OX-LDL of 50 ug/L and Ab-OX-LDL of 100 yg/L in nutrient medium) and the Ab-OX-LDL group (with additional Ab-OX-LDL of 100 ug/L in nutrient medium). After 24-hour culture, the expression of CD36 mRNA was detected by semi-quantitative RT-PCR. RESULTS; The expression of CD36 mRNA, either in the OX-LDL group or in the OX-LDL + Ab-OX-LDL group, was higher than that in the control group. After intervened by Ab-OX-LDL, the expression was respectively down-regulated by 64

  12. Prokaryotic Expression of FAT/CD36 Fusion Protein and the Specific Effects on the Deposition of Visceral Fat in Cockerel Chicks%FAT/CD36融合蛋白的表达及其对鸡腹脂沉积的特异性调控

    Institute of Scientific and Technical Information of China (English)

    束刚; 张永亮; 江青艳; 冯嘉颖; 余凯凡; 徐平稳; 朱晓彤; 高萍; 王松波; 习欠云; 王修启

    2009-01-01

    [目的]脂肪酸转位酶(fatty acid trans locase,FAT/C036)是介导脂肪酸跨膜转运和脂肪细胞聚脂的重要载体蛋白.本试验采用主动免疫法研究FAT/CD36在鸡脂肪沉积调控中的作用.[方法]将FAT/CD36膜外区抗原表位基因片段克隆入表达载体pET-32a(+),并转化在大肠杆菌BL21(DE3),构建FAT/CD36融合蛋白表达载体.主动免疫试验选取22日龄黄羽肉鸡60只,按公、母各随机分为2组,共4组.公鸡和母鸡的试验组分别在第34、49、和63天肌肉注射1 mg重组鸡FAT/CD36融合蛋白,以牛血清白蛋白(boyine serum albumin,BSA)为对照.[结果]重组菌表达分子量约为29 kD的鸡FAT/CD36融合蛋白,在0.1 mmol·L-1 IPTG诱导6 h后,目的蛋白表达量占菌体总蛋白的32%.表达产物主要以包涵体的形式存在,经纯化并透析复性后得到高纯度的FAT/CD36融合蛋白.主动免疫后,公鸡和母鸡试验组的血清抗FAT/CD36抗体水平逐渐升高,并在首次免疫后显著高于各自对照组.主动免疫FAT/CD36能特异性降低公鸡的腹脂率,但对母鸡无显著性影响.试验组与对照组皮下脂肪厚度差异不显著.[结论]FAT/CD36对鸡脂肪调控具有典型的性别特异性和部位差异.试验结果为进一步阐明禽类脂肪组织特异性沉积的分子机制提供理论依据.

  13. 益气活血法对脑出血大鼠脑内凝血酶敏感蛋白-1及其受体CD36表达的影响%Effects of Replenishing Qi and Promoting Blood Circulation Treatment on the Expression of Thrombospondin-1 and Receptor CD36 of lntracerebral Hemorrhagic Rats

    Institute of Scientific and Technical Information of China (English)

    陈柏林; 邢之华; 唐涛; 刘宜峰; 阳鹤鹏; 刘清娥; 吴汉军

    2011-01-01

    OBJECTIVE To make a primary study of the mechanism of replenishing qi and promoting blood circulation treatment for curing intracerebral hemorrhage (ICH) rats by observing the expression of thrombospondin-1 (TSP-1) and its receptor CD36. METHODS 155 SD rats were randomly divided into six groups, namely normal group, sham operated group, ICH model group, replenishing qi and promoting blood circulation treatment group, replenishing qi group and promoting blood circulation treatment group. ICH model was established by injecting collagenase type Ⅶ, while replenishing qi group, promoting blood circulation treatment group and replenishing qi and promoting blood circulation treatment group were respectively administered with replenishing qi decoction, promoting blood circulation treatment decoction and Buyang Huanwu Decoction. Afterwards, brain tissue was extracted different and the expression of TSP-1 and CD36 were detected by western blotting. RESULTS There was no significant changes in the expression of TSP-1 and CD36 between normal group and sham operated group at different time. In ICH model group, TSP-1 reached peak on the fourth day,CD36 on the 4th and 28th day. In replenishing qi and promoting blood circulation treatment group, the expression of TSP-1 was lower than that in model group on the 1st day(P<0.01); the expression of TSP-1 and CD36 was both lower than that in model group on the 4th day(P<0.01); the expression of CD36 was higher than that in model group on the 28th day(P<0.01).CONCLUSION Replenishing qi and promoting blood circulation treatment may regulate the expression of TSP-1 and its receptor CD36 in ICH rat, thus it can lower the inhibiting effect on angiogenesis and promote the shaping and maturity of new blood vessels as well as the recovery of brain tissue injury.%目的 通过观察益气活血法对脑出血大鼠脑内损伤区凝血酶敏感蛋白-1(thrombospondin-1,TSP-1)及其受体CD36表达的影响,初步探讨益气活血法

  14. Diabetes mellitus tipo 2: qual o papel da insulina na expressão de NF-kappaB, PPARγ e CD36?

    Directory of Open Access Journals (Sweden)

    Cristina de Oliveira SILVA

    2014-12-01

    Full Text Available No diabetes mellitus tipo 2 (DM2 e na síndrome de resistência à insulina, as complicações cardiovasculares resultam de um conjunto de processos aterogênicos envolvendo hiperglicemia crônica, excessiva glicação de proteínas (AGEs, ativação do fator nuclear kappa B (NKκB associada com o aumento da expressão de citocinas inflamatórias e estresse oxidativo, observando-se ainda alteração de LDL e expressão do receptor de scavenger CD36. A contribuição da hiperinsulinemia nesta sequência não é completamente elucidada. Nesta revisão, relata-se como a insulina pode modular a expressão proteica de NFκB, PPAR gama (PPARγ e CD36 em células da musculatura lisa vascular (CMLV da aorta de ratos estimuladas pelos AGE.

  15. Crucial role for LKB1 to AMPKalpha2 axis in the regulation of CD36-mediated long-chain fatty acid uptake into cardiomyocytes

    DEFF Research Database (Denmark)

    Habets, Daphna D. J.; Coumans, Will A.; El Hasnaoui, Mohammed;

    2009-01-01

    Enhanced contractile activity increases cardiac long-chain fatty acid (LCFA) uptake via translocation of CD36 to the sarcolemma, similarly to increase in glucose uptake via GLUT4 translocation. AMP-activated protein kinase (AMPK) is assumed to mediate contraction-induced LCFA utilization. However......, the stimulating effects of oligomycin and AICAR on palmitate and deoxyglucose uptake and palmitate oxidation were almost completely lost. Moreover, in AMPKalpha2- and LKB1-knockout cardiomyocytes, oligomycin-induced LCFA and deoxyglucose uptake were completely abolished. However, the stimulatory effect...... of dipyridamole on palmitate uptake and oxidation was preserved in AMPKalpha2-kinase-dead cardiomyocytes. In conclusion, in the heart there is a signaling axis consisting of LKB1 and AMPKalpha2 which activation results in enhanced LCFA utilization, similarly to enhanced glucose uptake. In addition, an unknown...

  16. Mécanisme d’absorption intestinale des acides gras à longue chaîne : rôle émergent du CD36

    Directory of Open Access Journals (Sweden)

    Tran Thi Thu Trang

    2012-07-01

    Full Text Available Excessive lipid intake, associated with a qualitative imbalance, favors the development of obesity and associated diseases. From organs involved in the lipid homeostasis, the small intestine remains the most poorly known although it is responsible for the lipid bioavailability and largely contributes to the regulation of postprandial hypertriglyceridemia. The mechanism of long chain fatty acid (LCFA intestinal absorption is not totally elucidated. Over the two last decades, cloning of lipid binding proteins (LBP, proteins involved in trafficking and metabolic fate of LCFA in gut have provided new insights on cellular and molecular mechanisms involved in fat absorption. The synthesis of recent literature indicates that intestine is able to adapt its absorption capacity to the fat content of the diet. This adaptation takes place through a fat-coordinated induction of LBP and apolipoproteins. CD36 could operate as a lipid sensor responsible for a transducing signal related to the lipid content of the diet at the origin of this intestinal adaptation. This lipid-mediated metabolic response may lead to the formation of large chylomicrons rapidly degraded in the blood. All together, these new data indicate that this intestinal lipid sensing mechanism may be a therapeutic target for reducing the postprandial hypertriglyceridemia and associated cardiovascular risks.

  17. Genetic variation in CD36, HBA, NOS3 and VCAM1 is associated with chronic haemolysis level in sickle cell anaemia: a longitudinal study.

    Science.gov (United States)

    Coelho, Andreia; Dias, Alexandra; Morais, Anabela; Nunes, Baltazar; Ferreira, Emanuel; Picanço, Isabel; Faustino, Paula; Lavinha, João

    2014-03-01

    Chronic haemolysis stands out as one of the hallmarks of sickle cell anaemia, a clinically heterogeneous autosomal recessive monogenic anaemia. However, the genetic architecture of this sub-phenotype is still poorly understood. Here, we report the results of an association study between haemolysis biomarkers (serum LDH, total bilirubin and reticulocyte count) and the inheritance of 41 genetic variants of ten candidate genes in a series of 99 paediatric SS patients (median current age of 9.9 yr) followed up in two general hospitals in Greater Lisboa area (median follow-up per patient of 5.0 yr). Although in a large number of tests a seemingly significant (i.e. P haplotype 7 within VCAM1 gene; (ii) a lower total bilirubin was associated with the 3.7-kb deletion at HBA gene, rs2070744_T allele at NOS3 gene, and haplotype 9 within VCAM1 promoter; and (iii) a diminished reticulocyte count was associated with the 3.7-kb deletion at HBA, whereas an increased count was associated with rs1984112_G allele at CD36 gene. On the whole, our findings suggest a complex genetic architecture for the sickle cell anaemia haemolysis process involving multiple pathways, namely control of vascular cell adhesion, NO synthesis and erythrocyte volume and haemoglobinisation.

  18. Plasmodium chabaudi-Infected Erythrocytes Adhere to CD36 and Bind to Microvascular Endothelial Cells in an Organ-Specific Way

    Science.gov (United States)

    Mota, Maria M.; Jarra, William; Hirst, Elizabeth; Patnaik, Pradeep K.; Holder, Anthony A.

    2000-01-01

    Adherence of erythrocytes infected with Plasmodium falciparum to microvascular endothelial cells (sequestration) is considered to play an important role in parasite virulence and pathogenesis. However, the real importance of sequestration for infection and disease has never been fully assessed. The absence of an appropriate in vivo model for sequestration has been a major barrier. We have examined the rodent malaria parasite Plasmodium chabaudi chabaudi AS in mice as a potential model. Erythrocytes infected with this parasite adhere in vitro to purified CD36, a critical endothelium receptor for binding P. falciparum-infected erythrocytes. P. c. chabaudi-infected erythrocytes adhere in vitro to endothelial cells in a gamma interferon-dependent manner, suggesting the involvement of additional adhesion molecules in the binding process, as is also the case with P. falciparum-infected cells. Furthermore, plasma or sera from infected and hyperimmune mice, respectively, have the ability to block binding of infected erythrocytes to endothelial cells. In vivo, erythrocytes containing mature P. c. chabaudi parasites are sequestered from the peripheral circulation. Sequestration is organ specific, occurring primarily in the liver, although intimate contact between infected erythrocytes and endothelial cells is also observed in the spleen and brain. The results are discussed in the context of the use of this model to study (i) the relationship between endothelial cell activation and the level of sequestration and (ii) the primary function of sequestration in malaria infection. PMID:10858230

  19. Cluster-cluster clustering

    Science.gov (United States)

    Barnes, J.; Dekel, A.; Efstathiou, G.; Frenk, C. S.

    1985-01-01

    The cluster correlation function xi sub c(r) is compared with the particle correlation function, xi(r) in cosmological N-body simulations with a wide range of initial conditions. The experiments include scale-free initial conditions, pancake models with a coherence length in the initial density field, and hybrid models. Three N-body techniques and two cluster-finding algorithms are used. In scale-free models with white noise initial conditions, xi sub c and xi are essentially identical. In scale-free models with more power on large scales, it is found that the amplitude of xi sub c increases with cluster richness; in this case the clusters give a biased estimate of the particle correlations. In the pancake and hybrid models (with n = 0 or 1), xi sub c is steeper than xi, but the cluster correlation length exceeds that of the points by less than a factor of 2, independent of cluster richness. Thus the high amplitude of xi sub c found in studies of rich clusters of galaxies is inconsistent with white noise and pancake models and may indicate a primordial fluctuation spectrum with substantial power on large scales.

  20. Cluster-cluster clustering

    Energy Technology Data Exchange (ETDEWEB)

    Barnes, J.; Dekel, A.; Efstathiou, G.; Frenk, C.S.

    1985-08-01

    The cluster correlation function xi sub c(r) is compared with the particle correlation function, xi(r) in cosmological N-body simulations with a wide range of initial conditions. The experiments include scale-free initial conditions, pancake models with a coherence length in the initial density field, and hybrid models. Three N-body techniques and two cluster-finding algorithms are used. In scale-free models with white noise initial conditions, xi sub c and xi are essentially identical. In scale-free models with more power on large scales, it is found that the amplitude of xi sub c increases with cluster richness; in this case the clusters give a biased estimate of the particle correlations. In the pancake and hybrid models (with n = 0 or 1), xi sub c is steeper than xi, but the cluster correlation length exceeds that of the points by less than a factor of 2, independent of cluster richness. Thus the high amplitude of xi sub c found in studies of rich clusters of galaxies is inconsistent with white noise and pancake models and may indicate a primordial fluctuation spectrum with substantial power on large scales. 30 references.

  1. Chemical abundance analysis of symbiotic giants - III. V694 Mon, CD-36 8436, WRAY 16-202, Hen 3-1213, V455 Sco, and Hen 2-247

    CERN Document Server

    Galan, Cezary; Hinkle, Kenneth H

    2014-01-01

    The elemental abundances of symbiotic giants are essential to address the role of chemical composition in the evolution of symbiotic binaries, to map their parent population, and to trace their mass transfer history. However,the number of symbiotic giants with fairly well determined photospheric composition is still insufficient for statistical analyses. This is the third in a series of papers on the chemical composition of symbiotic giants determined from high resolution (R 50000), near-IR spectra. We present results here for the giant star in the V694 Mon, CD-36 8436, WRAY 16-202, Hen 3-1213, V455 Sco, and Hen 2-247 systems. Spectrum synthesis employing standard local thermal equilibrium (LTE) analysis and atmosphere models were used to obtain photospheric abundances of CNO and elements around the iron peak (Sc, Ti, Fe, and Ni). Our analysis reveals metallicities from slightly super-solar for V455 Sco ([Fe/H] +0.3 dex), near solar for WRAY 16-202 and Hen 2-247, slightly sub-solar for V694 Mon and CD-36 8436...

  2. Caracterización del papel de la ácido graso translocasa CD36 en la enfermedad hepática grasa no alcohólica y en la hepatitis crónica por virus C

    OpenAIRE

    Fernández Bermejo, Miguel

    2014-01-01

    Tesis doctoral inédita leída en la Universidad Autónoma de Madrid, Facultad de Medicina, Departamento de Medicina. Fecha de lectura: 04-12-2014 Introducción: La ácido graso translocasa CD36 facilita la captación y el transporte intracelular de los ácidos grasos de cadena larga en diversos tipos celulares. En modelos animales de esteatosis hepática, su expresión está aumentada en los hepatocitos, acompañándose su translocación a la membrana plasmática de un incremento en la incorporación he...

  3. Acrolein-induced oxidative stress in NAD(P)H Oxidase Subunit gp91phox knock-out mice and its modulation of NFκB and CD36.

    Science.gov (United States)

    Yousefipour, Zivar; Zhang, Chelsea; Monfareed, Mahdieh; Walker, James; Newaz, Mohammad

    2013-11-01

    An essential component of NAD(P)H, gp91phox, maintains the functionality of the enzyme in producing oxygen radicals. NAD(P)H oxidase plays an important role in oxidative stress but its precise contribution in acrolein-induced toxicity was not explored. We examined the involvement of NAD(P)H oxidase and other oxidant system in acrolein toxicity using gp91phox knockout mice. Male gp91phox knockout (KO) mice (20-25 gm) or wild type (WT) controls were treated with acrolein (0.5 μg/kg; 1 week). Animals were sacrificed and the liver was used to determine biochemical parameters. Knockout mice generated low (1.43 ±.02 pg/μg protein) free radicals as evident in 8-Isoprostane compared with the WT mice (2.19 ± 0.1). Acrolein increased 8-Isoprostane in WT (PAcrolein increased XO in KO mice, but significantly increased it only in WT. Cycloxygenase (COX) activity was not different between WT and KO mice, although acroelin increased COX in WT. Knockout mice exhibited a significantly low (2.1 ± 0.2 μmol/mg protein) total antioxidant status (TAS) compared with the WT (3.5 ± 0.3). Acrolein reduced TAS in both WT and KO mice equally. Baseline NFκB was significantly higher in KO mice, although acrolein increased NFκB in WT but not in KO. CD36 was higher (pacrolein increased (pacrolein-induced oxidative stress. We also suggests that in the absence of NAD(P)H oxidase XO plays a definitive role together with reduced antioxidant ability to compound the toxic effects of acrolein. We propose that in absence of NAD(P)H oxidase a different signaling process may involve that utilizes CD36 besides NFκB.

  4. Platelet Rich Plasma (PRP) Produces an Atherofibrotic Histophenotype During Craniofacial Bone Repair Due to Changes of Immunohistochemical Expression of Erk1/2, p38α/β, Adiponectin and Elevated Presence of Cells Exhibiting B-scavenger Receptor (CD36+).

    Science.gov (United States)

    Schroeder, Caroline Cristine; Scariot, Juliana Souza Vieira Rafaela; Ribeiro, João Cesar Zielak Geraldo Monteiro; Deliberador, Tatiana Miranda; Giovanini, Andrea M Marcaccini Allan Fernando

    2016-01-01

    The platelet-extracellular matrix interaction in platelet rich plasma (PRP) through thrombospondin receptor-CD36 induces the secretion of growth factors responsible for cellular proliferation and differentiation during the repair process. Since CD36 also acts as a class B-scavenger-receptor for development of foam-like cells and mitogen-activated kinases, such as Erk1/2 and p38α/β, are important proteins activated by platelet growth factor, the aim of this study was to evaluate the immunohistochemical presence of CD36, Erk1/2, p38α/β during the bone repair treated and non-treated with PRP and to compare these results with the histomorphometry of repair. Simultaneously, the immunopresence of adiponectin was analyzed, which may contribute to osteogenesis at the same time it inhibits fibrosis and impairs adipogenesis and foam cell formation in the medullary area. An artificial bone defect measuring 5×1 mm was produced in the calvaria of 56 Wistar rats. The defects were randomly treated with autograft, autograft+PRP, PRP alone and sham. The animals were euthanized at 2 and 6 weeks post-surgery. Data were analyzed by ANOVA followed by non-parametric test Student Newman-Keuls (pPRP the immunopositivity for Erk1/2, p38α/β and CD36 proteins increased significantly while the immunohistochemical expression of adiponectin decreased simultaneously. There was also an accentuated reduction of bone matrix deposition and increase of the medullary area represented by fibrosis and/or presence of foam-like cells, which exhibited immunophenotype CD36+adiponectin. The findings of this study suggest that PRP acted as an inhibitor of osteogenesis during the craniofacial bone repair and induced a pathological condition that mimics an atherofibrotic condition.

  5. Cluster headache

    Science.gov (United States)

    Histamine headache; Headache - histamine; Migrainous neuralgia; Headache - cluster; Horton's headache; Vascular headache - cluster ... A cluster headache begins as a severe, sudden headache. The headache commonly strikes 2 to 3 hours after you fall ...

  6. Cluster Forests

    CERN Document Server

    Yan, Donghui; Jordan, Michael I

    2011-01-01

    Inspired by Random Forests (RF) in the context of classification, we propose a new clustering ensemble method---Cluster Forests (CF). Geometrically, CF randomly probes a high-dimensional data cloud to obtain "good local clusterings" and then aggregates via spectral clustering to obtain cluster assignments for the whole dataset. The search for good local clusterings is guided by a cluster quality measure $\\kappa$. CF progressively improves each local clustering in a fashion that resembles the tree growth in RF. Empirical studies on several real-world datasets under two different performance metrics show that CF compares favorably to its competitors. Theoretical analysis shows that the $\\kappa$ criterion is shown to grow each local clustering in a desirable way---it is "noise-resistant." A closed-form expression is obtained for the mis-clustering rate of spectral clustering under a perturbation model, which yields new insights into some aspects of spectral clustering.

  7. Star Clusters

    OpenAIRE

    Gieles, M.

    1993-01-01

    Star clusters are observed in almost every galaxy. In this thesis we address several fundamental problems concerning the formation, evolution and disruption of star clusters. From observations of (young) star clusters in the interacting galaxy M51, we found that clusters are formed in complexes of stars and star clusters. These complexes share similar properties with giant molecular clouds, from which they are formed. Many (70%) of the young clusters will not survive the fist 10 Myr, due to t...

  8. Meaningful Clusters

    Energy Technology Data Exchange (ETDEWEB)

    Sanfilippo, Antonio P.; Calapristi, Augustin J.; Crow, Vernon L.; Hetzler, Elizabeth G.; Turner, Alan E.

    2004-05-26

    We present an approach to the disambiguation of cluster labels that capitalizes on the notion of semantic similarity to assign WordNet senses to cluster labels. The approach provides interesting insights on how document clustering can provide the basis for developing a novel approach to word sense disambiguation.

  9. Weighted Clustering

    DEFF Research Database (Denmark)

    Ackerman, Margareta; Ben-David, Shai; Branzei, Simina

    2012-01-01

    We investigate a natural generalization of the classical clustering problem, considering clustering tasks in which different instances may have different weights.We conduct the first extensive theoretical analysis on the influence of weighted data on standard clustering algorithms in both...... the partitional and hierarchical settings, characterizing the conditions under which algorithms react to weights. Extending a recent framework for clustering algorithm selection, we propose intuitive properties that would allow users to choose between clustering algorithms in the weighted setting and classify...... algorithms accordingly....

  10. Cluster Lenses

    CERN Document Server

    Kneib, Jean-Paul; 10.1007/s00159-011-0047-3

    2012-01-01

    Clusters of galaxies are the most recently assembled, massive, bound structures in the Universe. As predicted by General Relativity, given their masses, clusters strongly deform space-time in their vicinity. Clusters act as some of the most powerful gravitational lenses in the Universe. Light rays traversing through clusters from distant sources are hence deflected, and the resulting images of these distant objects therefore appear distorted and magnified. Lensing by clusters occurs in two regimes, each with unique observational signatures. The strong lensing regime is characterized by effects readily seen by eye, namely, the production of giant arcs, multiple-images, and arclets. The weak lensing regime is characterized by small deformations in the shapes of background galaxies only detectable statistically. Cluster lenses have been exploited successfully to address several important current questions in cosmology: (i) the study of the lens(es) - understanding cluster mass distributions and issues pertaining...

  11. Data Clustering

    Science.gov (United States)

    Wagstaff, Kiri L.

    2012-03-01

    On obtaining a new data set, the researcher is immediately faced with the challenge of obtaining a high-level understanding from the observations. What does a typical item look like? What are the dominant trends? How many distinct groups are included in the data set, and how is each one characterized? Which observable values are common, and which rarely occur? Which items stand out as anomalies or outliers from the rest of the data? This challenge is exacerbated by the steady growth in data set size [11] as new instruments push into new frontiers of parameter space, via improvements in temporal, spatial, and spectral resolution, or by the desire to "fuse" observations from different modalities and instruments into a larger-picture understanding of the same underlying phenomenon. Data clustering algorithms provide a variety of solutions for this task. They can generate summaries, locate outliers, compress data, identify dense or sparse regions of feature space, and build data models. It is useful to note up front that "clusters" in this context refer to groups of items within some descriptive feature space, not (necessarily) to "galaxy clusters" which are dense regions in physical space. The goal of this chapter is to survey a variety of data clustering methods, with an eye toward their applicability to astronomical data analysis. In addition to improving the individual researcher’s understanding of a given data set, clustering has led directly to scientific advances, such as the discovery of new subclasses of stars [14] and gamma-ray bursts (GRBs) [38]. All clustering algorithms seek to identify groups within a data set that reflect some observed, quantifiable structure. Clustering is traditionally an unsupervised approach to data analysis, in the sense that it operates without any direct guidance about which items should be assigned to which clusters. There has been a recent trend in the clustering literature toward supporting semisupervised or constrained

  12. Cluster Chemistry

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    @@ Cansisting of eight scientists from the State Key Laboratory of Physical Chemistry of Solid Surfaces and Xiamen University, this creative research group is devoted to the research of cluster chemistry and creation of nanomaterials.After three-year hard work, the group scored a series of encouraging progresses in synthesis of clusters with special structures, including novel fullerenes, fullerene-like metal cluster compounds as well as other related nanomaterials, and their properties study.

  13. Kaempferol suppresses lipid accumulation in macrophages through the downregulation of cluster of differentiation 36 and the upregulation of scavenger receptor class B type I and ATP-binding cassette transporters A1 and G1.

    Science.gov (United States)

    Li, Xiu-Ying; Kong, Ling-Xi; Li, Juan; He, Hai-Xia; Zhou, Yuan-Da

    2013-02-01

    The accumulation of foam cells in atherosclerotic lesions is a hallmark of early-stage atherosclerosis. Kaempferol has been shown to inhibit oxidized low-density lipoprotein (oxLDL) uptake by macrophages; however, the underlying molecular mechanisms are not yet fully investigated. In this study, we shown that treatment with kaempferol markedly suppresses oxLDL-induced macrophage foam cell formation, which occurs due to a decrease in lipid accumulation and an increase in cholesterol efflux from THP-1-derived macrophages. Additionally, the kaempferol treatment of macrophages led to the downregulation of cluster of differentiation 36 (CD36) protein levels, the upregulation of ATP-binding cassette (ABC) transporter A1 (ABCA1), scavenger receptor class B type I (SR-BI) and ABCG1 protein levels, while no effects on scavenger receptor A (SR-A) expression were observed. Kaempferol had similar effects on the mRNA and protein expression of ABCA1, SR-BI, SR-A, CD36 and ABCG1. The reduced CD36 expression following kaempferol treatment involved the inhibition of c-Jun-activator protein-1 (AP-1) nuclear translocation. The inhibition of AP-1 using the inhibitor, SP600125, confirmed this involvement, as the AP-1 inhibition significantly augmented the kaempferol-induced reduction in CD36 expression. Accordingly, the kaempferol-mediated suppression of lipid accumulation in macrophages was also augmented by SP600125. The increased expression of ABCA1, SR-BI and ABCG1 following kaempferol treatment was accompanied by the enhanced protein expression of heme oxygenase-1 (HO-1). This increase was reversed following the knockdown of the HO-1 gene using small hairpin RNA (shRNA). Moreover, the kaempferol-mediated attenuation of lipid accumulation and the promotion of cholesterol efflux was also inhibited by HO-1 shRNA. In conclusion, the c-Jun-AP‑1-dependent downregulation of CD36 and the HO-1-dependent upregulation of ABCG1, SR-BI and ABCA1 may mediate the beneficial effects of

  14. Clustered regression with unknown clusters

    CERN Document Server

    Barman, Kishor

    2011-01-01

    We consider a collection of prediction experiments, which are clustered in the sense that groups of experiments ex- hibit similar relationship between the predictor and response variables. The experiment clusters as well as the regres- sion relationships are unknown. The regression relation- ships define the experiment clusters, and in general, the predictor and response variables may not exhibit any clus- tering. We call this prediction problem clustered regres- sion with unknown clusters (CRUC) and in this paper we focus on linear regression. We study and compare several methods for CRUC, demonstrate their applicability to the Yahoo Learning-to-rank Challenge (YLRC) dataset, and in- vestigate an associated mathematical model. CRUC is at the crossroads of many prior works and we study several prediction algorithms with diverse origins: an adaptation of the expectation-maximization algorithm, an approach in- spired by K-means clustering, the singular value threshold- ing approach to matrix rank minimization u...

  15. Subspace clustering through attribute clustering

    Institute of Scientific and Technical Information of China (English)

    Kun NIU; Shubo ZHANG; Junliang CHEN

    2008-01-01

    Many recently proposed subspace clustering methods suffer from two severe problems. First, the algorithms typically scale exponentially with the data dimensionality or the subspace dimensionality of clusters. Second, the clustering results are often sensitive to input parameters. In this paper, a fast algorithm of subspace clustering using attribute clustering is proposed to over-come these limitations. This algorithm first filters out redundant attributes by computing the Gini coefficient. To evaluate the correlation of every two non-redundant attributes, the relation matrix of non-redundant attributes is constructed based on the relation function of two dimensional united Gini coefficients. After applying an overlapping clustering algorithm on the relation matrix, the candidate of all interesting subspaces is achieved. Finally, all subspace clusters can be derived by clustering on interesting subspaces. Experiments on both synthesis and real datasets show that the new algorithm not only achieves a significant gain of runtime and quality to find subspace clusters, but also is insensitive to input parameters.

  16. Cluster editing

    DEFF Research Database (Denmark)

    Böcker, S.; Baumbach, Jan

    2013-01-01

    . The problem has been the inspiration for numerous algorithms in bioinformatics, aiming at clustering entities such as genes, proteins, phenotypes, or patients. In this paper, we review exact and heuristic methods that have been proposed for the Cluster Editing problem, and also applications......The Cluster Editing problem asks to transform a graph into a disjoint union of cliques using a minimum number of edge modifications. Although the problem has been proven NP-complete several times, it has nevertheless attracted much research both from the theoretical and the applied side...

  17. Cluster analysis

    CERN Document Server

    Everitt, Brian S; Leese, Morven; Stahl, Daniel

    2011-01-01

    Cluster analysis comprises a range of methods for classifying multivariate data into subgroups. By organizing multivariate data into such subgroups, clustering can help reveal the characteristics of any structure or patterns present. These techniques have proven useful in a wide range of areas such as medicine, psychology, market research and bioinformatics.This fifth edition of the highly successful Cluster Analysis includes coverage of the latest developments in the field and a new chapter dealing with finite mixture models for structured data.Real life examples are used throughout to demons

  18. Weighted Clustering

    CERN Document Server

    Ackerman, Margareta; Branzei, Simina; Loker, David

    2011-01-01

    In this paper we investigate clustering in the weighted setting, in which every data point is assigned a real valued weight. We conduct a theoretical analysis on the influence of weighted data on standard clustering algorithms in each of the partitional and hierarchical settings, characterising the precise conditions under which such algorithms react to weights, and classifying clustering methods into three broad categories: weight-responsive, weight-considering, and weight-robust. Our analysis raises several interesting questions and can be directly mapped to the classical unweighted setting.

  19. Fuzzy Clustering

    DEFF Research Database (Denmark)

    Berks, G.; Keyserlingk, Diedrich Graf von; Jantzen, Jan;

    2000-01-01

    and clustering are the basic concerns in medicine. Classification depends on definitions of the classes and their required degree of participant of the elements in the cases' symptoms. In medicine imprecise conditions are the rule and therefore fuzzy methods are much more suitable than crisp ones. Fuzzy c....... A symptom may belong to more than one class. For instance to the class of very severe disease and to the class of failure of awareness of the own disturbance. The description of language failures by c-mean classification of analyzed factors correspond in many but not in all cases to the traditional......-mean clustering is an easy and well improved tool, which has been applied in many medical fields. We used c-mean fuzzy clustering after feature extraction from an aphasia database. Factor analysis was applied on a correlation matrix of 26 symptoms of language disorders and led to five factors. The factors...

  20. Quotients of cluster categories

    OpenAIRE

    Jorgensen, Peter

    2007-01-01

    Higher cluster categories were recently introduced as a generalization of cluster categories. This paper shows that in Dynkin types A and D, half of all higher cluster categories are actually just quotients of cluster categories. The other half can be obtained as quotients of 2-cluster categories, the "lowest" type of higher cluster categories. Hence, in Dynkin types A and D, all higher cluster phenomena are implicit in cluster categories and 2-cluster categories. In contrast, the same is not...

  1. Regional Innovation Clusters

    Data.gov (United States)

    Small Business Administration — The Regional Innovation Clusters serve a diverse group of sectors and geographies. Three of the initial pilot clusters, termed Advanced Defense Technology clusters,...

  2. Cluster forcing

    DEFF Research Database (Denmark)

    Christensen, Thomas Budde

    -industrialism and the ‘liveable' region. In this paper the cluster strategies that have been applied to the automotive sector in Wales are analysed. The paper includes a theoretical discussion on how the cluster concept has been applied to industrial policies, along with an empirical analysis of the application of the concept...... automotive sector in Wales. The paper draws from a survey of Welsh automotive suppliers on the characteristics of the local business environment and innovation. On the basis of the survey it is concluded that the public sector has an important task ahead concerning the linkages between universities and local...... businesses. The universities were not considered by the participating companies to be important parts of the local business environment and inputs from universities did not appear to be an important source to access knowledge about new product development or new techniques in production, distribution...

  3. An Automatic Clustering Technique for Optimal Clusters

    CERN Document Server

    Pavan, K Karteeka; Rao, A V Dattatreya; 10.5121/ijcsea.2011.1412

    2011-01-01

    This paper proposes a simple, automatic and efficient clustering algorithm, namely, Automatic Merging for Optimal Clusters (AMOC) which aims to generate nearly optimal clusters for the given datasets automatically. The AMOC is an extension to standard k-means with a two phase iterative procedure combining certain validation techniques in order to find optimal clusters with automation of merging of clusters. Experiments on both synthetic and real data have proved that the proposed algorithm finds nearly optimal clustering structures in terms of number of clusters, compactness and separation.

  4. Effects of High-fat Diet and Treadmill Exercise on AMP-activated Protein Kinase (AMPK)/Acetyl-CoA Carboxylase (ACC) Signaling Pathway and Fatty Acid Translocase CD36 Protein Content in Rat Gastrocnemius Muscle%高脂膳食和跑台运动对雄性大鼠腓肠肌腺苷酸活化蛋白激酶/乙酰辅酶A羧化酶信号通路和膜蛋白脂肪酸转位酶蛋白含量的影响

    Institute of Scientific and Technical Information of China (English)

    张云丽; 娄淑杰

    2015-01-01

    目的 探讨高脂膳食和8周有氧耐力运动对大鼠腓肠肌腺苷酸活化蛋白激酶(AMPK)/乙酰辅酶A羧化酶(ACC)信号通路和膜蛋白脂肪酸转位酶CD36含量的影响.方法 建立营养性肥胖大鼠模型,并随机分为肥胖安静组(OC组)和肥胖运动组(OE组),另设普通饲料安静组(NC组)和普通饲料运动组(NE组).运动干预结束后检测腓肠肌AMPKα、p-AMPKa ACC、 p-ACC和膜蛋白CD36的蛋白水平.结果 1)NE组与NC、OE及OC组相比,p-AMPKα的蛋白水平显著升高(P<0.01);OC组p-AMPKα的蛋白水平显著低于NC组(P<0.01).2)OC组p-ACC蛋白水平显著低于NC组(P<0.01);OE组p-ACC的蛋白水平显著高于OC组(P<0.01).3)NE组与NC、OE及OC组相比,OC组与NC组相比,膜蛋白CD36含量均无显著性变化(P>0.05).结论 1)运动可改善高脂膳食引起的AMPK/ACC信号通路障碍.2)运动对体质量不同大鼠p-ACC蛋白水平的影响存在差异.3)腓肠肌膜蛋白CD36的含量并没有伴随AMPK/ACC信号通路的激活或抑制而发生显著变化.

  5. Cluster headache

    Directory of Open Access Journals (Sweden)

    Ducros Anne

    2008-07-01

    Full Text Available Abstract Cluster headache (CH is a primary headache disease characterized by recurrent short-lasting attacks (15 to 180 minutes of excruciating unilateral periorbital pain accompanied by ipsilateral autonomic signs (lacrimation, nasal congestion, ptosis, miosis, lid edema, redness of the eye. It affects young adults, predominantly males. Prevalence is estimated at 0.5–1.0/1,000. CH has a circannual and circadian periodicity, attacks being clustered (hence the name in bouts that can occur during specific months of the year. Alcohol is the only dietary trigger of CH, strong odors (mainly solvents and cigarette smoke and napping may also trigger CH attacks. During bouts, attacks may happen at precise hours, especially during the night. During the attacks, patients tend to be restless. CH may be episodic or chronic, depending on the presence of remission periods. CH is associated with trigeminovascular activation and neuroendocrine and vegetative disturbances, however, the precise cautive mechanisms remain unknown. Involvement of the hypothalamus (a structure regulating endocrine function and sleep-wake rhythms has been confirmed, explaining, at least in part, the cyclic aspects of CH. The disease is familial in about 10% of cases. Genetic factors play a role in CH susceptibility, and a causative role has been suggested for the hypocretin receptor gene. Diagnosis is clinical. Differential diagnoses include other primary headache diseases such as migraine, paroxysmal hemicrania and SUNCT syndrome. At present, there is no curative treatment. There are efficient treatments to shorten the painful attacks (acute treatments and to reduce the number of daily attacks (prophylactic treatments. Acute treatment is based on subcutaneous administration of sumatriptan and high-flow oxygen. Verapamil, lithium, methysergide, prednisone, greater occipital nerve blocks and topiramate may be used for prophylaxis. In refractory cases, deep-brain stimulation of the

  6. Partitional clustering algorithms

    CERN Document Server

    2015-01-01

    This book summarizes the state-of-the-art in partitional clustering. Clustering, the unsupervised classification of patterns into groups, is one of the most important tasks in exploratory data analysis. Primary goals of clustering include gaining insight into, classifying, and compressing data. Clustering has a long and rich history that spans a variety of scientific disciplines including anthropology, biology, medicine, psychology, statistics, mathematics, engineering, and computer science. As a result, numerous clustering algorithms have been proposed since the early 1950s. Among these algorithms, partitional (nonhierarchical) ones have found many applications, especially in engineering and computer science. This book provides coverage of consensus clustering, constrained clustering, large scale and/or high dimensional clustering, cluster validity, cluster visualization, and applications of clustering. Examines clustering as it applies to large and/or high-dimensional data sets commonly encountered in reali...

  7. Clustering and Community Detection with Imbalanced Clusters

    OpenAIRE

    Aksoylar, Cem; Qian, Jing; Saligrama, Venkatesh

    2016-01-01

    Spectral clustering methods which are frequently used in clustering and community detection applications are sensitive to the specific graph constructions particularly when imbalanced clusters are present. We show that ratio cut (RCut) or normalized cut (NCut) objectives are not tailored to imbalanced cluster sizes since they tend to emphasize cut sizes over cut values. We propose a graph partitioning problem that seeks minimum cut partitions under minimum size constraints on partitions to de...

  8. Cluster headaches.

    Science.gov (United States)

    Ryan, R E; Ryan, R E

    1989-12-01

    The patient with cluster headaches will be afflicted with the most severe type of pain that one will encounter. If the physician can do something to help this patient either by symptomatic or, more importantly, prophylactic treatment, he or she will have a most thankful patient. This type of headache is seen most frequently in men, and occurs in a cyclic manner. During an acute cycle, the patient will experience a daily type of pain that may occur many times per day. The pain is usually unilateral and may be accompanied by unilateral lacrimation, conjunctivitis, and clear rhinorrhea. Prednisone is the first treatment we employ. Patients are seen for follow-up approximately twice a week, and their medication is lowered in an appropriate manner, depending on their response to the treatment. Regulation of dosage has to be individualized, and when one reaches the lower dose such as 5 to 10 mg per day, the drug may have to be tapered more slowly, or even maintained at that level for a period of time to prevent further recurrence of symptoms. We frequently will use an intravenous histamine desensitization technique to prevent further attacks. We will give the patient an ergotamine preparation to use for symptomatic relief. As these patients often have headaches during the middle of the night, we will place the patient on a 2-mg ergotamine preparation to take prior to going to bed in the evening. This often works in a prophylactic nature, and prevents the nighttime occurrence of a headache. We believe that following these principles to make the accurate diagnosis and institute the proper therapy will help the practicing otolaryngologist recognize and treat patients suffering from this severe pain.

  9. Factorial PD-Clustering

    CERN Document Server

    Tortora, Cristina; Summa, Mireille Gettler

    2011-01-01

    Factorial clustering methods have been developed in recent years thanks to the improving of computational power. These methods perform a linear transformation of data and a clustering on transformed data optimizing a common criterion. Factorial PD-clustering is based on Probabilistic Distance clustering (PD-clustering). PD-clustering is an iterative, distribution free, probabilistic, clustering method. Factorial PD-clustering make a linear transformation of original variables into a reduced number of orthogonal ones using a common criterion with PD-Clustering. It is demonstrated that Tucker 3 decomposition allows to obtain this transformation. Factorial PD-clustering makes alternatively a Tucker 3 decomposition and a PD-clustering on transformed data until convergence. This method could significantly improve the algorithm performance and allows to work with large dataset, to improve the stability and the robustness of the method.

  10. Possibilistic Exponential Fuzzy Clustering

    Institute of Scientific and Technical Information of China (English)

    Kiatichai Treerattanapitak; Chuleerat Jaruskulchai

    2013-01-01

    Generally,abnormal points (noise and outliers) cause cluster analysis to produce low accuracy especially in fuzzy clustering.These data not only stay in clusters but also deviate the centroids from their true positions.Traditional fuzzy clustering like Fuzzy C-Means (FCM) always assigns data to all clusters which is not reasonable in some circumstances.By reformulating objective function in exponential equation,the algorithm aggressively selects data into the clusters.However noisy data and outliers cannot be properly handled by clustering process therefore they are forced to be included in a cluster because of a general probabilistic constraint that the sum of the membership degrees across all clusters is one.In order to improve this weakness,possibilistic approach relaxes this condition to improve membership assignment.Nevertheless,possibilistic clustering algorithms generally suffer from coincident clusters because their membership equations ignore the distance to other clusters.Although there are some possibilistic clustering approaches that do not generate coincident clusters,most of them require the right combination of multiple parameters for the algorithms to work.In this paper,we theoretically study Possibilistic Exponential Fuzzy Clustering (PXFCM) that integrates possibilistic approach with exponential fuzzy clustering.PXFCM has only one parameter and not only partitions the data but also filters noisy data or detects them as outliers.The comprehensive experiments show that PXFCM produces high accuracy in both clustering results and outlier detection without generating coincident problems.

  11. Dissolution of Globular Clusters

    OpenAIRE

    Baumgardt, Holger

    2006-01-01

    Globular clusters are among the oldest objects in galaxies, and understanding the details of their formation and evolution can bring valuable insight into the early history of galaxies. This review summarises the current knowledge about the dissolution of star clusters and discusses the implications of star cluster dissolution for the evolution of the mass function of star cluster systems in galaxies.

  12. Structures of Mn clusters

    Indian Academy of Sciences (India)

    Tina M Briere; Marcel H F Sluiter; Vijay Kumar; Yoshiyuki Kawazoe

    2003-01-01

    The geometries of several Mn clusters in the size range Mn13–Mn23 are studied via the generalized gradient approximation to density functional theory. For the 13- and 19-atom clusters, the icosahedral structures are found to be most stable, while for the 15-atom cluster, the bcc structure is more favoured. The clusters show ferrimagnetic spin configurations.

  13. Contextualizing the Cluster

    DEFF Research Database (Denmark)

    Giacomin, Valeria

    This dissertation examines the case of the palm oil cluster in Malaysia and Indonesia, today one of the largest agricultural clusters in the world. My analysis focuses on the evolution of the cluster from the 1880s to the 1970s in order to understand how it helped these two countries to integrate......-researched topic in the cluster literature – the emergence of clusters, their governance and institutional change, and competition between rival cluster locations – through the case of the Southeast Asian palm oil cluster....

  14. Clustering in analytical chemistry.

    Science.gov (United States)

    Drab, Klaudia; Daszykowski, Michal

    2014-01-01

    Data clustering plays an important role in the exploratory analysis of analytical data, and the use of clustering methods has been acknowledged in different fields of science. In this paper, principles of data clustering are presented with a direct focus on clustering of analytical data. The role of the clustering process in the analytical workflow is underlined, and its potential impact on the analytical workflow is emphasized.

  15. What Makes Clusters Decline?

    DEFF Research Database (Denmark)

    Østergaard, Christian Richter; Park, Eun Kyung

    2015-01-01

    Most studies on regional clusters focus on identifying factors and processes that make clusters grow. However, sometimes technologies and market conditions suddenly shift, and clusters decline. This paper analyses the process of decline of the wireless communication cluster in Denmark....... The longitudinal study on the high-tech cluster reveals that technological lock-in and exit of key firms have contributed to decline. Entrepreneurship has a positive effect on the cluster’s adaptive capabilities, while multinational companies have contradicting effects by bringing in new resources to the cluster...

  16. The Cluster Substructure - Alignment Connection

    OpenAIRE

    Plionis, Manolis

    2001-01-01

    Using the APM cluster data we investigate whether the dynamical status of clusters is related to the large-scale structure of the Universe. We find that cluster substructure is strongly correlated with the tendency of clusters to be aligned with their nearest neighbour and in general with the nearby clusters that belong to the same supercluster. Furthermore, dynamically young clusters are more clustered than the overall cluster population. These are strong indications that cluster develop in ...

  17. Nuclear Clusters in Astrophysics

    Energy Technology Data Exchange (ETDEWEB)

    Kubono, S.; Binh, Dam N.; Hayakawa, S.; Hashimoto, H.; Kahl, D.; Wakabayashi, Y.; Yamaguchi, H. [Center for Nuclear Study (CNS), University of Tokyo, Wako Branch at RIKEN 2-1 Hirosawa, Wako, Saitama, 351-0198 (Japan); Teranishi, T. [Department of Physics, Kyushu University, Fukuoka, 812-8581 (Japan); Iwasa, N. [Department of Physics, Tohoku University, Sendai, 980-8578 (Japan); Komatsubara, T. [Department of Physics, Tsukuba University, Ibaraki, 305-8571 (Japan); Kato, S. [Department of Physics, Yamagata University, Yamagata, 990-8560 (Japan); Khiem, Le H. [Institute of Physics, Vietnam Academy for Science and Technology, Hanoi (Viet Nam)

    2010-03-01

    The role of nuclear clustering is discussed for nucleosynthesis in stellar evolution with Cluster Nucleosynthesis Diagram (CND) proposed before. Special emphasis is placed on alpha-induced stellar reactions together with molecular states for O and C burning.

  18. [Pathophysiology of cluster headache].

    Science.gov (United States)

    Donnet, Anne

    2015-11-01

    The aetiology of cluster headache is partially unknown. Three areas are involved in the pathogenesis of cluster headache: the trigeminal nociceptive pathways, the autonomic system and the hypothalamus. The cluster headache attack involves activation of the trigeminal autonomic reflex. A dysfunction located in posterior hypothalamic gray matter is probably pivotal in the process. There is a probable association between smoke exposure, a possible genetic predisposition and the development of cluster headache.

  19. Cluster Physics with Merging Galaxy Clusters

    Directory of Open Access Journals (Sweden)

    Sandor M. Molnar

    2016-02-01

    Full Text Available Collisions between galaxy clusters provide a unique opportunity to study matter in a parameter space which cannot be explored in our laboratories on Earth. In the standard LCDM model, where the total density is dominated by the cosmological constant ($Lambda$ and the matter density by cold dark matter (CDM, structure formation is hierarchical, and clusters grow mostly by merging.Mergers of two massive clusters are the most energetic events in the universe after the Big Bang,hence they provide a unique laboratory to study cluster physics.The two main mass components in clusters behave differently during collisions:the dark matter is nearly collisionless, responding only to gravity, while the gas is subject to pressure forces and dissipation, and shocks and turbulenceare developed during collisions. In the present contribution we review the different methods used to derive the physical properties of merging clusters. Different physical processes leave their signatures on different wavelengths, thusour review is based on a multifrequency analysis. In principle, the best way to analyze multifrequency observations of merging clustersis to model them using N-body/HYDRO numerical simulations. We discuss the results of such detailed analyses.New high spatial and spectral resolution ground and space based telescopeswill come online in the near future. Motivated by these new opportunities,we briefly discuss methods which will be feasible in the near future in studying merging clusters.

  20. The Durban Auto Cluster

    DEFF Research Database (Denmark)

    Lorentzen, Jochen; Robbins, Glen; Barnes, Justin

    2004-01-01

    The paper describes the formation of the Durban Auto Cluster in the context of trade liberalization. It argues that the improvement of operational competitiveness of firms in the cluster is prominently due to joint action. It tests this proposition by comparing the gains from cluster activities i...

  1. Cluster analysis for applications

    CERN Document Server

    Anderberg, Michael R

    1973-01-01

    Cluster Analysis for Applications deals with methods and various applications of cluster analysis. Topics covered range from variables and scales to measures of association among variables and among data units. Conceptual problems in cluster analysis are discussed, along with hierarchical and non-hierarchical clustering methods. The necessary elements of data analysis, statistics, cluster analysis, and computer implementation are integrated vertically to cover the complete path from raw data to a finished analysis.Comprised of 10 chapters, this book begins with an introduction to the subject o

  2. Management of cluster headache

    DEFF Research Database (Denmark)

    Tfelt-Hansen, Peer C; Jensen, Rigmor H

    2012-01-01

    and agitation. Patients may have up to eight attacks per day. Episodic cluster headache (ECH) occurs in clusters of weeks to months duration, whereas chronic cluster headache (CCH) attacks occur for more than 1 year without remissions. Management of cluster headache is divided into acute attack treatment....... In drug-resistant CCH, neuromodulation with either occipital nerve stimulation or deep brain stimulation of the hypothalamus is an alternative treatment strategy. For most cluster headache patients there are fairly good treatment options both for acute attacks and for prophylaxis. The big problem...

  3. Cluster Decline and Resilience

    DEFF Research Database (Denmark)

    Østergaard, Christian Richter; Park, Eun Kyung

    -2011. Our longitudinal study reveals that technological lock-in and exit of key firms have contributed to impairment of the cluster’s resilience in adapting to disruptions. Entrepreneurship has a positive effect on cluster resilience, while multinational companies have contradicting effects by bringing......Most studies on regional clusters focus on identifying factors and processes that make clusters grow. However, sometimes technologies and market conditions suddenly shift, and clusters decline. This paper analyses the process of decline of the wireless communication cluster in Denmark, 1963...

  4. Clustering high dimensional data

    DEFF Research Database (Denmark)

    Assent, Ira

    2012-01-01

    to render traditional clustering algorithms ineffective. The curse of dimensionality, among other effects, means that with increasing number of dimensions, a loss of meaningful differentiation between similar and dissimilar objects is observed. As high-dimensional objects appear almost alike, new approaches...... for clustering are required. Consequently, recent research has focused on developing techniques and clustering algorithms specifically for high-dimensional data. Still, open research issues remain. Clustering is a data mining task devoted to the automatic grouping of data based on mutual similarity. Each cluster...... that provide different cluster models and different algorithmic approaches for cluster detection. Common to all approaches is the fact that they require some underlying assessment of similarity between data objects. In this article, we provide an overview of the effects of high-dimensional spaces...

  5. Clusters in nuclei

    CERN Document Server

    Beck, Christian

    Following the pioneering discovery of alpha clustering and of molecular resonances, the field of nuclear clustering is today one of those domains of heavy-ion nuclear physics that faces the greatest challenges, yet also contains the greatest opportunities. After many summer schools and workshops, in particular over the last decade, the community of nuclear molecular physicists has decided to collaborate in producing a comprehensive collection of lectures and tutorial reviews covering the field. This third volume follows the successful Lect. Notes Phys. 818 (Vol. 1) and 848 (Vol. 2), and comprises six extensive lectures covering the following topics:  - Gamma Rays and Molecular Structure - Faddeev Equation Approach for Three Cluster Nuclear Reactions - Tomography of the Cluster Structure of Light Nuclei Via Relativistic Dissociation - Clustering Effects Within the Dinuclear Model : From Light to Hyper-heavy Molecules in Dynamical Mean-field Approach - Clusterization in Ternary Fission - Clusters in Light N...

  6. Unconventional methods for clustering

    Science.gov (United States)

    Kotyrba, Martin

    2016-06-01

    Cluster analysis or clustering is a task of grouping a set of objects in such a way that objects in the same group (called a cluster) are more similar (in some sense or another) to each other than to those in other groups (clusters). It is the main task of exploratory data mining and a common technique for statistical data analysis used in many fields, including machine learning, pattern recognition, image analysis, information retrieval, and bioinformatics. The topic of this paper is one of the modern methods of clustering namely SOM (Self Organising Map). The paper describes the theory needed to understand the principle of clustering and descriptions of algorithm used with clustering in our experiments.

  7. Spatial cluster modelling

    CERN Document Server

    Lawson, Andrew B

    2002-01-01

    Research has generated a number of advances in methods for spatial cluster modelling in recent years, particularly in the area of Bayesian cluster modelling. Along with these advances has come an explosion of interest in the potential applications of this work, especially in epidemiology and genome research. In one integrated volume, this book reviews the state-of-the-art in spatial clustering and spatial cluster modelling, bringing together research and applications previously scattered throughout the literature. It begins with an overview of the field, then presents a series of chapters that illuminate the nature and purpose of cluster modelling within different application areas, including astrophysics, epidemiology, ecology, and imaging. The focus then shifts to methods, with discussions on point and object process modelling, perfect sampling of cluster processes, partitioning in space and space-time, spatial and spatio-temporal process modelling, nonparametric methods for clustering, and spatio-temporal ...

  8. CLEAN: CLustering Enrichment ANalysis

    Directory of Open Access Journals (Sweden)

    Medvedovic Mario

    2009-07-01

    Full Text Available Abstract Background Integration of biological knowledge encoded in various lists of functionally related genes has become one of the most important aspects of analyzing genome-wide functional genomics data. In the context of cluster analysis, functional coherence of clusters established through such analyses have been used to identify biologically meaningful clusters, compare clustering algorithms and identify biological pathways associated with the biological process under investigation. Results We developed a computational framework for analytically and visually integrating knowledge-based functional categories with the cluster analysis of genomics data. The framework is based on the simple, conceptually appealing, and biologically interpretable gene-specific functional coherence score (CLEAN score. The score is derived by correlating the clustering structure as a whole with functional categories of interest. We directly demonstrate that integrating biological knowledge in this way improves the reproducibility of conclusions derived from cluster analysis. The CLEAN score differentiates between the levels of functional coherence for genes within the same cluster based on their membership in enriched functional categories. We show that this aspect results in higher reproducibility across independent datasets and produces more informative genes for distinguishing different sample types than the scores based on the traditional cluster-wide analysis. We also demonstrate the utility of the CLEAN framework in comparing clusterings produced by different algorithms. CLEAN was implemented as an add-on R package and can be downloaded at http://Clusteranalysis.org. The package integrates routines for calculating gene specific functional coherence scores and the open source interactive Java-based viewer Functional TreeView (FTreeView. Conclusion Our results indicate that using the gene-specific functional coherence score improves the reproducibility of the

  9. Agricultural Clusters in the Netherlands

    NARCIS (Netherlands)

    Schouten, M.A.; Heijman, W.J.M.

    2012-01-01

    Michael Porter was the first to use the term cluster in an economic context. He introduced the term in The Competitive Advantage of Nations (1990). The term cluster is also known as business cluster, industry cluster, competitive cluster or Porterian cluster. This article aims at determining and mea

  10. Clustering Categorical Data:A Cluster Ensemble Approach

    Institute of Scientific and Technical Information of China (English)

    He Zengyou(何增友); Xu Xiaofei; Deng Shengchun

    2003-01-01

    Clustering categorical data, an integral part of data mining,has attracted much attention recently. In this paper, the authors formally define the categorical data clustering problem as an optimization problem from the viewpoint of cluster ensemble, and apply cluster ensemble approach for clustering categorical data. Experimental results on real datasets show that better clustering accuracy can be obtained by comparing with existing categorical data clustering algorithms.

  11. Spatial Scan Statistic: Selecting clusters and generating elliptic clusters

    DEFF Research Database (Denmark)

    Christiansen, Lasse Engbo; Andersen, Jens Strodl

    2004-01-01

    The spatial scan statistic is widely used to search for clusters. This paper shows that the usually applied elimination of overlapping clusters to find secondary clusters is sensitive to smooth changes in the shape of the clusters. We present an algorithm for generation of set of confocal elliptic...... clusters. In addition, we propose a new way to present the information in a given set of clusters based on the significance of the clusters....

  12. Disentangling Porterian Clusters

    DEFF Research Database (Denmark)

    Jagtfelt, Tue

    This dissertation investigates the contemporary phenomenon of industrial clusters based on the work of Michael E. Porter, the central progenitor and promoter of the cluster notion. The dissertation pursues two central questions: 1) What is a cluster? and 2) How could Porter’s seemingly fuzzy...... to his membership on the Commission on Industrial Competitiveness, and that the cluster notion found in his influential book, Nations, represents a significant shift in his conception of cluster compared with his early conceptions. This shift, it is argued, is a deliberate attempt by Porter to create......, contested theory become so widely disseminated and applied as a normative and prescriptive strategy for economic development? The dissertation traces the introduction of the cluster notion into the EU’s Lisbon Strategy and demonstrates how its inclusion originates from Porter’s colleagues: Professor Örjan...

  13. Online Correlation Clustering

    CERN Document Server

    Mathieu, Claire; Schudy, Warren

    2010-01-01

    We study the online clustering problem where data items arrive in an online fashion. The algorithm maintains a clustering of data items into similarity classes. Upon arrival of v, the relation between v and previously arrived items is revealed, so that for each u we are told whether v is similar to u. The algorithm can create a new cluster for v and merge existing clusters. When the objective is to minimize disagreements between the clustering and the input, we prove that a natural greedy algorithm is O(n)-competitive, and this is optimal. When the objective is to maximize agreements between the clustering and the input, we prove that the greedy algorithm is .5-competitive; that no online algorithm can be better than .834-competitive; we prove that it is possible to get better than 1/2, by exhibiting a randomized algorithm with competitive ratio .5+c for a small positive fixed constant c.

  14. Melting of sodium clusters

    CERN Document Server

    Reyes-Nava, J A; Beltran, M R; Michaelian, K

    2002-01-01

    Thermal stability properties and the melting-like transition of Na_n, n=13-147, clusters are studied through microcanonical molecular dynamics simulations. The metallic bonding in the sodium clusters is mimicked by a many-body Gupta potential based on the second moment approximation of a tight-binding Hamiltonian. The characteristics of the solid-to-liquid transition in the sodium clusters are analyzed by calculating physical quantities like caloric curves, heat capacities, and root-mean-square bond length fluctuations using simulation times of several nanoseconds. Distinct melting mechanisms are obtained for the sodium clusters in the size range investigated. The calculated melting temperatures show an irregular variation with the cluster size, in qualitative agreement with recent experimental results. However, the calculated melting point for the Na_55 cluster is about 40 % lower than the experimental value.

  15. Cosmology with cluster surveys

    Indian Academy of Sciences (India)

    Subhabrata Majumdar

    2004-10-01

    Surveys of clusters of galaxies provide us with a powerful probe of the density and nature of the dark energy. The red-shift distribution of detected clusters is highly sensitive to the dark energy equation of state parameter . Upcoming Sunyaev–Zel'dovich (SZ) surveys would provide us large yields of clusters to very high red-shifts. Self-calibration of cluster scaling relations, possible for such a huge sample, would be able to constrain systematic biases on mass estimators. Combining cluster red-shift abundance with limited mass follow-up and cluster mass power spectrum can then give constraints on , as well as on 8 and to a few per cents.

  16. CSR in Industrial Clusters

    DEFF Research Database (Denmark)

    Lund-Thomsen, Peter; Pillay, Renginee G.

    2012-01-01

    Purpose – The paper seeks to review the literature on CSR in industrial clusters in developing countries, identifying the main strengths, weaknesses, and gaps in this literature, pointing to future research directions and policy implications in the area of CSR and industrial cluster development...... in this field and their comments incorporated in the final version submitted to Corporate Governance. Findings – The article traces the origins of the debate on industrial clusters and CSR in developing countries back to the early 1990s when clusters began to be seen as an important vehicle for local economic...... development in the South. At the turn of the millennium the industrial cluster debate expanded as clusters were perceived as a potential source of poverty reduction, while their role in promoting CSR among small and medium-sized enterprises began to take shape from 2006 onwards. At present, there is still...

  17. Cluster Management Institutionalization

    DEFF Research Database (Denmark)

    Normann, Leo; Agger Nielsen, Jeppe

    2015-01-01

    This article explores a new management form – cluster management – in Danish public sector day care. Although cluster management has been widely adopted in Danish day care at the municipality level, it has attracted only sparse research attention. We use theoretical insights from Scandinavian...... institutionalism together with a longitudinal case-based inquiry into how cluster management has entered and penetrated the management practices of day care in Denmark. We demonstrate how cluster management became widely adopted in the day care field not only because of its intrinsic properties but also because...... of how it was legitimized as a “ready-to-use” management model. Further, our account reveals how cluster management translated into considerably different local variants as it travelled into specific organizations. However, these processes have not occurred sequentially with cluster management first...

  18. Structures in Galaxy Clusters

    CERN Document Server

    Escalera, E; Girardi, M; Giuricin, G; Mardirossian, F; Mazure, A; Mezzetti, M

    1993-01-01

    The analysis of the presence of substructures in 16 well-sampled clusters of galaxies suggests a stimulating hypothesis: Clusters could be classified as unimodal or bimodal, on the basis of to the sub-clump distribution in the {\\em 3-D} space of positions and velocities. The dynamic study of these clusters shows that their fundamental characteristics, in particular the virial masses, are not severely biased by the presence of subclustering if the system considered is bound.

  19. Clustering Techniques in Bioinformatics

    Directory of Open Access Journals (Sweden)

    Muhammad Ali Masood

    2015-01-01

    Full Text Available Dealing with data means to group information into a set of categories either in order to learn new artifacts or understand new domains. For this purpose researchers have always looked for the hidden patterns in data that can be defined and compared with other known notions based on the similarity or dissimilarity of their attributes according to well-defined rules. Data mining, having the tools of data classification and data clustering, is one of the most powerful techniques to deal with data in such a manner that it can help researchers identify the required information. As a step forward to address this challenge, experts have utilized clustering techniques as a mean of exploring hidden structure and patterns in underlying data. Improved stability, robustness and accuracy of unsupervised data classification in many fields including pattern recognition, machine learning, information retrieval, image analysis and bioinformatics, clustering has proven itself as a reliable tool. To identify the clusters in datasets algorithm are utilized to partition data set into several groups based on the similarity within a group. There is no specific clustering algorithm, but various algorithms are utilized based on domain of data that constitutes a cluster and the level of efficiency required. Clustering techniques are categorized based upon different approaches. This paper is a survey of few clustering techniques out of many in data mining. For the purpose five of the most common clustering techniques out of many have been discussed. The clustering techniques which have been surveyed are: K-medoids, K-means, Fuzzy C-means, Density-Based Spatial Clustering of Applications with Noise (DBSCAN and Self-Organizing Map (SOM clustering.

  20. Clustering of Absorbers

    CERN Document Server

    Cristiani, S; D'Odorico, V; Fontana, A; Giallongo, E; Moscardini, L; Savaglio, S

    1997-01-01

    The observed clustering of Lyman-$\\alpha$ lines is reviewed and compared with the clustering of CIV systems. We argue that a continuity of properties exists between Lyman-$\\alpha$ and metal systems and show that the small-scale clustering of the absorbers is consistent with a scenario of gravitationally induced correlations. At large scales statistically significant over and under-densities (including voids) are found on scales of tens of Mpc.

  1. Galaxy Clusters with Chandra

    CERN Document Server

    Forman, W; Markevitch, M L; Vikhlinin, A A; Churazov, E

    2002-01-01

    We discuss Chandra results related to 1) cluster mergers and cold fronts and 2) interactions between relativistic plasma and hot cluster atmospheres. We describe the properties of cold fronts using NGC1404 in the Fornax cluster and A3667 as examples. We discuss multiple surface brightness discontinuities in the cooling flow cluster ZW3146. We review the supersonic merger underway in CL0657. Finally, we summarize the interaction between plasma bubbles produced by AGN and hot gas using M87 and NGC507 as examples.

  2. Star Clusters within FIRE

    Science.gov (United States)

    Perez, Adrianna; Moreno, Jorge; Naiman, Jill; Ramirez-Ruiz, Enrico; Hopkins, Philip F.

    2017-01-01

    In this work, we analyze the environments surrounding star clusters of simulated merging galaxies. Our framework employs Feedback In Realistic Environments (FIRE) model (Hopkins et al., 2014). The FIRE project is a high resolution cosmological simulation that resolves star forming regions and incorporates stellar feedback in a physically realistic way. The project focuses on analyzing the properties of the star clusters formed in merging galaxies. The locations of these star clusters are identified with astrodendro.py, a publicly available dendrogram algorithm. Once star cluster properties are extracted, they will be used to create a sub-grid (smaller than the resolution scale of FIRE) of gas confinement in these clusters. Then, we can examine how the star clusters interact with these available gas reservoirs (either by accreting this mass or blowing it out via feedback), which will determine many properties of the cluster (star formation history, compact object accretion, etc). These simulations will further our understanding of star formation within stellar clusters during galaxy evolution. In the future, we aim to enhance sub-grid prescriptions for feedback specific to processes within star clusters; such as, interaction with stellar winds and gas accretion onto black holes and neutron stars.

  3. The Youngest Globular Clusters

    CERN Document Server

    Beck, Sara

    2014-01-01

    It is likely that all stars are born in clusters, but most clusters are not bound and disperse. None of the many protoclusters in our Galaxy are likely to develop into long-lived bound clusters. The Super Star Clusters (SSCs) seen in starburst galaxies are more massive and compact and have better chances of survival. The birth and early development of SSCs takes place deep in molecular clouds, and during this crucial stage the embedded clusters are invisible to optical or UV observations but are studied via the radio-infared supernebulae (RISN) they excite. We review observations of embedded clusters and identify RISN within 10 Mpc whose exciting clusters have a million solar masses or more in volumes of a few cubic parsecs and which are likely to not only survive as bound clusters, but to evolve into objects as massive and compact as Galactic globulars. These clusters are distinguished by very high star formation efficiency eta, at least a factor of 10 higher than the few percent seen in the Galaxy, probably...

  4. 15th Cluster workshop

    CERN Document Server

    Laakso, Harri; Escoubet, C. Philippe; The Cluster Active Archive : Studying the Earth’s Space Plasma Environment

    2010-01-01

    Since the year 2000 the ESA Cluster mission has been investigating the small-scale structures and processes of the Earth's plasma environment, such as those involved in the interaction between the solar wind and the magnetospheric plasma, in global magnetotail dynamics, in cross-tail currents, and in the formation and dynamics of the neutral line and of plasmoids. This book contains presentations made at the 15th Cluster workshop held in March 2008. It also presents several articles about the Cluster Active Archive and its datasets, a few overview papers on the Cluster mission, and articles reporting on scientific findings on the solar wind, the magnetosheath, the magnetopause and the magnetotail.

  5. Document Clustering Based on Semi-Supervised Term Clustering

    Directory of Open Access Journals (Sweden)

    Hamid Mahmoodi

    2012-05-01

    Full Text Available The study is conducted to propose a multi-step feature (term selection process and in semi-supervised fashion, provide initial centers for term clusters. Then utilize the fuzzy c-means (FCM clustering algorithm for clustering terms. Finally assign each of documents to closest associated term clusters. While most text clustering algorithms directly use documents for clustering, we propose to first group the terms using FCM algorithm and then cluster documents based on terms clusters. We evaluate effectiveness of our technique on several standard text collections and compare our results with the some classical text clustering algorithms.

  6. Clustering Text Data Streams

    Institute of Scientific and Technical Information of China (English)

    Yu-Bao Liu; Jia-Rong Cai; Jian Yin; Ada Wai-Chee Fu

    2008-01-01

    Clustering text data streams is an important issue in data mining community and has a number of applications such as news group filtering, text crawling, document organization and topic detection and tracing etc. However, most methods are similarity-based approaches and only use the TF*IDF scheme to represent the semantics of text data and often lead to poor clustering quality. Recently, researchers argue that semantic smoothing model is more efficient than the existing TF.IDF scheme for improving text clustering quality. However, the existing semantic smoothing model is not suitable for dynamic text data context. In this paper, we extend the semantic smoothing model into text data streams context firstly. Based on the extended model, we then present two online clustering algorithms OCTS and OCTSM for the clustering of massive text data streams. In both algorithms, we also present a new cluster statistics structure named cluster profile which can capture the semantics of text data streams dynamically and at the same time speed up the clustering process. Some efficient implementations for our algorithms are also given. Finally, we present a series of experimental results illustrating the effectiveness of our technique.

  7. Neurostimulation in cluster headache

    DEFF Research Database (Denmark)

    Pedersen, Jeppe L; Barloese, Mads; Jensen, Rigmor H

    2013-01-01

    PURPOSE OF REVIEW: Neurostimulation has emerged as a viable treatment for intractable chronic cluster headache. Several therapeutic strategies are being investigated including stimulation of the hypothalamus, occipital nerves and sphenopalatine ganglion. The aim of this review is to provide...... effective strategy must be preferred as first-line therapy for intractable chronic cluster headache....

  8. Securing personal network clusters

    NARCIS (Netherlands)

    Jehangir, Assed; Heemstra de Groot, Sonia M.

    2007-01-01

    A Personal Network is a self-organizing, secure and private network of a user’s devices notwithstanding their geographic location. It aims to utilize pervasive computing to provide users with new and improved services. In this paper we propose a model for securing Personal Network clusters. Clusters

  9. [Cluster headache differential diagnosis].

    Science.gov (United States)

    Guégan-Massardier, Evelyne; Laubier, Cécile

    2015-11-01

    Cluster headache is characterized by disabling stereotyped headache. Early diagnosis allows appropriate treatment, unfortunately diagnostic errors are frequent. The main differential diagnoses are other primary or essential headaches. Migraine, more frequent and whose diagnosis is carried by excess, trigeminal neuralgia or other trigemino-autonomic cephalgia. Vascular or tumoral underlying condition can mimic cluster headache, neck and brain imaging is recommended, ideally MRI.

  10. Coma cluster of galaxies

    Science.gov (United States)

    1999-01-01

    Atlas Image mosaic, covering 34' x 34' on the sky, of the Coma cluster, aka Abell 1656. This is a particularly rich cluster of individual galaxies (over 1000 members), most prominently the two giant ellipticals, NGC 4874 (right) and NGC 4889 (left). The remaining members are mostly smaller ellipticals, but spiral galaxies are also evident in the 2MASS image. The cluster is seen toward the constellation Coma Berenices, but is actually at a distance of about 100 Mpc (330 million light years, or a redshift of 0.023) from us. At this distance, the cluster is in what is known as the 'Hubble flow,' or the overall expansion of the Universe. As such, astronomers can measure the Hubble Constant, or the universal expansion rate, based on the distance to this cluster. Large, rich clusters, such as Coma, allow astronomers to measure the 'missing mass,' i.e., the matter in the cluster that we cannot see, since it gravitationally influences the motions of the member galaxies within the cluster. The near-infrared maps the overall luminous mass content of the member galaxies, since the light at these wavelengths is dominated by the more numerous older stellar populations. Galaxies, as seen by 2MASS, look fairly smooth and homogeneous, as can be seen from the Hubble 'tuning fork' diagram of near-infrared galaxy morphology. Image mosaic by S. Van Dyk (IPAC).

  11. Cluster Management Institutionalization

    DEFF Research Database (Denmark)

    Normann, Leo; Agger Nielsen, Jeppe

    2015-01-01

    This article explores a new management form – cluster management – in Danish public sector day care. Although cluster management has been widely adopted in Danish day care at the municipality level, it has attracted only sparse research attention. We use theoretical insights from Scandinavian ins...

  12. Cluster Synchronization Algorithms

    NARCIS (Netherlands)

    Xia, Weiguo; Cao, Ming

    2010-01-01

    This paper presents two approaches to achieving cluster synchronization in dynamical multi-agent systems. In contrast to the widely studied synchronization behavior, where all the coupled agents converge to the same value asymptotically, in the cluster synchronization problem studied in this paper,

  13. Cost-Effective Clustering

    CERN Document Server

    Gottlieb, S

    2001-01-01

    Small Beowulf clusters can effectively serve as personal or group supercomputers. In such an environment, a cluster can be optimally designed for a specific problem (or a small set of codes). We discuss how theoretical analysis of the code and benchmarking on similar hardware lead to optimal systems.

  14. Relevant Subspace Clustering

    DEFF Research Database (Denmark)

    Müller, Emmanuel; Assent, Ira; Günnemann, Stephan;

    2009-01-01

    Subspace clustering aims at detecting clusters in any subspace projection of a high dimensional space. As the number of possible subspace projections is exponential in the number of dimensions, the result is often tremendously large. Recent approaches fail to reduce results to relevant subspace c...

  15. On TPC cluster reconstruction

    CERN Document Server

    Dydak, F; Nefedov, Y; Wotschack, J; Zhemchugov, A

    2004-01-01

    For a bias-free momentum measurement of TPC tracks, the correct determination of cluster positions is mandatory. We argue in particular that (i) the reconstruction of the entire longitudinal signal shape in view of longitudinal diffusion, electronic pulse shaping, and track inclination is important both for the polar angle reconstruction and for optimum r phi resolution; and that (ii) self-crosstalk of pad signals calls for special measures for the reconstruction of the z coordinate. The problem of 'shadow clusters' is resolved. Algorithms are presented for accepting clusters as 'good' clusters, and for the reconstruction of the r phi and z cluster coordinates, including provisions for 'bad' pads and pads next to sector boundaries, respectively.

  16. Job Oriented Monitoring Clusters

    Directory of Open Access Journals (Sweden)

    Vijayalaxmi Cigala,

    2011-03-01

    Full Text Available There has been a lot of development in the field of clusters and grids. Recently, the use of clusters has been on rise in every possible field. This paper proposes a system that monitors jobs onlarge computational clusters. Monitoring jobs is essential to understand how jobs are being executed. This helps us in understanding the complete life cycle of the jobs being executed on large clusters. Also, this paper describes how the information obtained by monitoring the jobs would help in increasing the overall throughput of clusters. Heuristics help in efficient job distribution among the computational nodes, thereby accomplishing fair job distribution policy. The proposed system would be capable of loadbalancing among the computational nodes, detecting failures, taking corrective actions after failure detection, job monitoring, system resource monitoring, etc.

  17. Neutrosophic Hierarchical Clustering Algoritms

    Directory of Open Access Journals (Sweden)

    Rıdvan Şahin

    2014-03-01

    Full Text Available Interval neutrosophic set (INS is a generalization of interval valued intuitionistic fuzzy set (IVIFS, whose the membership and non-membership values of elements consist of fuzzy range, while single valued neutrosophic set (SVNS is regarded as extension of intuitionistic fuzzy set (IFS. In this paper, we extend the hierarchical clustering techniques proposed for IFSs and IVIFSs to SVNSs and INSs respectively. Based on the traditional hierarchical clustering procedure, the single valued neutrosophic aggregation operator, and the basic distance measures between SVNSs, we define a single valued neutrosophic hierarchical clustering algorithm for clustering SVNSs. Then we extend the algorithm to classify an interval neutrosophic data. Finally, we present some numerical examples in order to show the effectiveness and availability of the developed clustering algorithms.

  18. A Commodity Computing Cluster

    Science.gov (United States)

    Teuben, P. J.; Wolfire, M. G.; Pound, M. W.; Mundy, L. G.

    We have assembled a cluster of Intel-Pentium based PCs running Linux to compute a large set of Photodissociation Region (PDR) and Dust Continuum models. For various reasons the cluster is heterogeneous, currently ranging from a single Pentium-II 333 MHz to dual Pentium-III 450 MHz CPU machines. Although this will be sufficient for our ``embarrassingly parallelizable problem'' it may present some challenges for as yet unplanned future use. In addition the cluster was used to construct a MIRIAD benchmark, and compared to equivalent Ultra-Sparc based workstations. Currently the cluster consists of 8 machines, 14 CPUs, 50GB of disk-space, and a total peak speed of 5.83 GHz, or about 1.5 Gflops. The total cost of this cluster has been about $12,000, including all cabling, networking equipment, rack, and a CD-R backup system. The URL for this project is http://dustem.astro.umd.edu.

  19. Mathematical classification and clustering

    CERN Document Server

    Mirkin, Boris

    1996-01-01

    I am very happy to have this opportunity to present the work of Boris Mirkin, a distinguished Russian scholar in the areas of data analysis and decision making methodologies. The monograph is devoted entirely to clustering, a discipline dispersed through many theoretical and application areas, from mathematical statistics and combina­ torial optimization to biology, sociology and organizational structures. It compiles an immense amount of research done to date, including many original Russian de­ velopments never presented to the international community before (for instance, cluster-by-cluster versions of the K-Means method in Chapter 4 or uniform par­ titioning in Chapter 5). The author's approach, approximation clustering, allows him both to systematize a great part of the discipline and to develop many in­ novative methods in the framework of optimization problems. The optimization methods considered are proved to be meaningful in the contexts of data analysis and clustering. The material presented in ...

  20. Cool Cluster Correctly Correlated

    Energy Technology Data Exchange (ETDEWEB)

    Varganov, Sergey Aleksandrovich [Iowa State Univ., Ames, IA (United States)

    2005-01-01

    Atomic clusters are unique objects, which occupy an intermediate position between atoms and condensed matter systems. For a long time it was thought that physical and chemical properties of atomic dusters monotonically change with increasing size of the cluster from a single atom to a condensed matter system. However, recently it has become clear that many properties of atomic clusters can change drastically with the size of the clusters. Because physical and chemical properties of clusters can be adjusted simply by changing the cluster's size, different applications of atomic clusters were proposed. One example is the catalytic activity of clusters of specific sizes in different chemical reactions. Another example is a potential application of atomic clusters in microelectronics, where their band gaps can be adjusted by simply changing cluster sizes. In recent years significant advances in experimental techniques allow one to synthesize and study atomic clusters of specified sizes. However, the interpretation of the results is often difficult. The theoretical methods are frequently used to help in interpretation of complex experimental data. Most of the theoretical approaches have been based on empirical or semiempirical methods. These methods allow one to study large and small dusters using the same approximations. However, since empirical and semiempirical methods rely on simple models with many parameters, it is often difficult to estimate the quantitative and even qualitative accuracy of the results. On the other hand, because of significant advances in quantum chemical methods and computer capabilities, it is now possible to do high quality ab-initio calculations not only on systems of few atoms but on clusters of practical interest as well. In addition to accurate results for specific clusters, such methods can be used for benchmarking of different empirical and semiempirical approaches. The atomic clusters studied in this work contain from a few atoms

  1. Cluster knockout reactions

    Indian Academy of Sciences (India)

    Arun K Jain; B N Joshi

    2014-04-01

    Cluster knockout reactions are expected to reveal the amount of clustering (such as that of , d and even of heavier clusters such as 12C, 16O etc.) in the target nucleus. In simple terms, incident medium high-energy nuclear projectile interacts strongly with the cluster (present in the target nucleus) as if it were existing as a free entity. Theoretically, the relatively softer interactions of the two outgoing particles with the residual nucleus lead to optical distortions and are treated in terms of distorted wave (DW) formalism. The long-range projectile–cluster interaction is accounted for, in terms of the finite range (FR) direct reaction formalism, as against the more commonly adopted zero-range (ZR) distorted wave impulse approximation (DWIA) formalism. Comparison of the DWIA calculations with the observed data provide information about the momentum distribution and the clustering spectroscopic factor of the target nucleus. Interesting results and some recent advancements in the area of (, 2) reactions and heavy cluster knockout reactions are discussed. Importance of the finite-range vertex and the final-state interactions are brought out.

  2. Software-Defined Cluster

    Institute of Scientific and Technical Information of China (English)

    聂华; 杨晓君; 刘淘英

    2015-01-01

    The cluster architecture has played an important role in high-end computing for the past 20 years. With the advent of Internet services, big data, and cloud computing, traditional clusters face three challenges: 1) providing flexible system balance among computing, memory, and I/O capabilities;2) reducing resource pooling overheads;and 3) addressing low performance-power efficiency. This position paper proposes a software-defined cluster (SDC) architecture to deal with these challenges. The SDC architecture inherits two features of traditional cluster: its architecture is multicomputer and it has loosely-coupled interconnect. SDC provides two new mechanisms: global I/O space (GIO) and hardware-supported native access (HNA) to remote devices. Application software can define a virtual cluster best suited to its needs from resources pools provided by a physical cluster, and traditional cluster ecosystems need no modification. We also discuss a prototype design and implementation of a 32-processor cloud server utilizing the SDC architecture.

  3. Spanning Tree Based Attribute Clustering

    DEFF Research Database (Denmark)

    Zeng, Yifeng; Jorge, Cordero Hernandez

    2009-01-01

    inconsistent edges from a maximum spanning tree by starting appropriate initial modes, therefore generating stable clusters. It discovers sound clusters through simple graph operations and achieves significant computational savings. We compare the Star Discovery algorithm against earlier attribute clustering...

  4. Textile Industrial Clusters in China

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    "National Textile Industry Cluster Development Seminar" convened, held by China National Textile and Apparel Council, 23 cities and towns were awarded as China’s Textile Industry Cluster Pilot District. By far, China’s textile industrial clusters have grown

  5. Allodynia in Cluster Headache.

    Science.gov (United States)

    Wilbrink, Leopoldine A; Louter, Mark A; Teernstra, Onno Pm; van Zwet, Erik W; Huygen, Frank Jpm; Haan, Joost; Ferrari, Michel D; Terwindt, Gisela M

    2017-03-04

    Cutaneous allodynia is an established marker for central sensitization in migraine. There is debate whether cutaneous allodynia may also occur in cluster headache, another episodic headache disorder. Here we examined the presence and severity of allodynia in a large well-defined nation-wide population of people with cluster headache.Using validated questionnaires we assessed, cross-sectionally, ictal allodynia and comorbid depression and migraine in the nation-wide "Leiden University Cluster headache neuro-Analysis" (LUCA) study. Participants with cluster headache were diagnosed according to the International Classification of Headache Disorders criteria. Multivariate regression models were used, with correction for demographic factors and cluster headache subtype (chronic vs. episodic; recent attacks cluster headache responded of whom 218/606 (36%) had allodynia during attacks. Female gender (OR 2.05, 95% CI 1.28-3.29), low age at onset (OR 0.98, 95% CI 0.96- 0.99), lifetime depression (OR 1.63; 95% CI 1.06-2.50), comorbid migraine (OR 1.96; 95% CI 1.02-3.79), and having recent attacks (OR 1.80; 95% CI 1.13-2.86), but not duration of attacks and chronic cluster headache, were independent risk factors for allodynia.The high prevalence of cutaneous allodynia with similar risk factors for allodynia as found for migraine suggests that central sensitization, like in migraine, also occurs in cluster headache. In clinical practice, awareness that people with cluster headache may suffer from allodynia can in the future be an important feature in treatment options.

  6. Introduction to cluster dynamics

    CERN Document Server

    Reinhard, Paul-Gerhard

    2008-01-01

    Clusters as mesoscopic particles represent an intermediate state of matter between single atoms and solid material. The tendency to miniaturise technical objects requires knowledge about systems which contain a ""small"" number of atoms or molecules only. This is all the more true for dynamical aspects, particularly in relation to the qick development of laser technology and femtosecond spectroscopy. Here, for the first time is a highly qualitative introduction to cluster physics. With its emphasis on cluster dynamics, this will be vital to everyone involved in this interdisciplinary subje

  7. ClusterAlive

    Science.gov (United States)

    Caruso, G.; Arezzini, S.; Ciampa, A.; Formuso, A.; Mazzoni, E.

    2015-12-01

    INFN-Pisa Scientific Computing Center is working from many years both in GRID and HPC computing. The monitoring and managing tools have been key components of the center's successful operation. The lessons learned from the use of standard tools, such as Ganglia, have been starting points for the development of new tools specific for our infrastructure. In this note we will illustrate the integration of many different monitoring tools in one single platform called ClusterAlive. Aim of ClusterAlive is to increase the HPC cluster performance and simplify maintenance operations, possibly in a proactive approach.

  8. Raspberry Pi super cluster

    CERN Document Server

    Dennis, Andrew K

    2013-01-01

    This book follows a step-by-step, tutorial-based approach which will teach you how to develop your own super cluster using Raspberry Pi computers quickly and efficiently.Raspberry Pi Super Cluster is an introductory guide for those interested in experimenting with parallel computing at home. Aimed at Raspberry Pi enthusiasts, this book is a primer for getting your first cluster up and running.Basic knowledge of C or Java would be helpful but no prior knowledge of parallel computing is necessary.

  9. Cluster modular autocontenido

    OpenAIRE

    2009-01-01

    Desde hace años es común en organizaciones educativas y de investigación el desarrollo de actividades que requieren grandes capacidades de cálculo. La solución más común a estas necesidades es la compra o construcción de un cluster HPC (High Performance Computing), pero construir un cluster acarrea problemas y costos inesperados problemas al momento de utilizarlo y mantenerlo en operaciones. Nuestro proyecto busca desarrollar y documentar técnicas para construir un cluster HPC que sea fácilme...

  10. Extending Beowulf Clusters

    Science.gov (United States)

    Steinwand, Daniel R.; Maddox, Brian; Beckmann, Tim; Hamer, George

    2003-01-01

    Beowulf clusters can provide a cost-effective way to compute numerical models and process large amounts of remote sensing image data. Usually a Beowulf cluster is designed to accomplish a specific set of processing goals, and processing is very efficient when the problem remains inside the constraints of the original design. There are cases, however, when one might wish to compute a problem that is beyond the capacity of the local Beowulf system. In these cases, spreading the problem to multiple clusters or to other machines on the network may provide a cost-effective solution.

  11. Combining cluster number counts and galaxy clustering

    Science.gov (United States)

    Lacasa, Fabien; Rosenfeld, Rogerio

    2016-08-01

    The abundance of clusters and the clustering of galaxies are two of the important cosmological probes for current and future large scale surveys of galaxies, such as the Dark Energy Survey. In order to combine them one has to account for the fact that they are not independent quantities, since they probe the same density field. It is important to develop a good understanding of their correlation in order to extract parameter constraints. We present a detailed modelling of the joint covariance matrix between cluster number counts and the galaxy angular power spectrum. We employ the framework of the halo model complemented by a Halo Occupation Distribution model (HOD). We demonstrate the importance of accounting for non-Gaussianity to produce accurate covariance predictions. Indeed, we show that the non-Gaussian covariance becomes dominant at small scales, low redshifts or high cluster masses. We discuss in particular the case of the super-sample covariance (SSC), including the effects of galaxy shot-noise, halo second order bias and non-local bias. We demonstrate that the SSC obeys mathematical inequalities and positivity. Using the joint covariance matrix and a Fisher matrix methodology, we examine the prospects of combining these two probes to constrain cosmological and HOD parameters. We find that the combination indeed results in noticeably better constraints, with improvements of order 20% on cosmological parameters compared to the best single probe, and even greater improvement on HOD parameters, with reduction of error bars by a factor 1.4-4.8. This happens in particular because the cross-covariance introduces a synergy between the probes on small scales. We conclude that accounting for non-Gaussian effects is required for the joint analysis of these observables in galaxy surveys.

  12. Evolution of clustered storage

    CERN Document Server

    CERN. Geneva; Van de Vyvre, Pierre

    2007-01-01

    The session actually featured two presentations: * Evolution of clustered storage by Lance Hukill, Quantum Corporation * ALICE DAQ - Usage of a Cluster-File System: Quantum StorNext by Pierre Vande Vyvre, CERN-PH the second one prepared at short notice by Pierre (thanks!) to present how the Quantum technologies are being used in the ALICE experiment. The abstract to Mr Hukill's follows. Clustered Storage is a technology that is driven by business and mission applications. The evolution of Clustered Storage solutions starts first at the alignment between End-users needs and Industry trends: * Push-and-Pull between managing for today versus planning for tomorrow * Breaking down the real business problems to the core applications * Commoditization of clients, servers, and target devices * Interchangeability, Interoperability, Remote Access, Centralized control * Oh, and yes, there is a budget and the "real world" to deal with This presentation will talk through these needs and trends, and then ask the question, ...

  13. Globular clusters with Gaia

    Science.gov (United States)

    Pancino, E.; Bellazzini, M.; Giuffrida, G.; Marinoni, S.

    2017-01-01

    The treatment of crowded fields in Gaia data will only be a reality in a few years from now. In particular, for globular clusters, only the end-of-mission data (public in 2022-2023) will have the necessary full crowding treatment and will reach sufficient quality for the faintest stars. As a consequence, the work on the deblending and decontamination pipelines is still ongoing. We describe the present status of the pipelines for different Gaia instruments, and we model the end-of-mission crowding errors on the basis of available information. We then apply the nominal post-launch Gaia performances, appropriately worsened by the estimated crowding errors, to a set of 18 simulated globular clusters with different concentration, distance, and field contamination. We conclude that there will be 103-104 stars with astrometric performances virtually untouched by crowding (contaminated by <1 mmag) in the majoritiy of clusters. The most limiting factor will be field crowding, not cluster crowding: the most contaminated clusters will only contain 10-100 clean stars. We also conclude that: (i) the systemic proper motions and parallaxes will be determined to 1% or better up to ≃15 kpc, and the nearby clusters will have radial velocities to a few km s-1 ; (ii) internal kinematics will be of unprecendented quality, cluster masses will be determined to ≃10% up to 15 kpc and beyond, and it will be possible to identify differences of a few km s-1 or less in the kinematics (if any) of cluster sub-populations up to 10 kpc and beyond; (iii) the brightest stars (V≃17 mag) will have space-quality, wide-field photometry (mmag errors), and all Gaia photometry will have 1-3% errors on the absolute photometric calibration.

  14. Magnetic cluster excitations

    Science.gov (United States)

    Furrer, Albert; Waldmann, Oliver

    2013-01-01

    Magnetic clusters, i.e., assemblies of a finite number (between two or three and several hundred) of interacting spin centers which are magnetically decoupled from their environment, can be found in many materials ranging from inorganic compounds and magnetic molecules to artificial metal structures formed on surfaces and metalloproteins. Their magnetic excitation spectra are determined by the nature of the spin centers and of the magnetic interactions, and the particular arrangement of the mutual interaction paths between the spin centers. Small clusters of up to four magnetic ions are ideal model systems in which to examine the fundamental magnetic interactions, which are usually dominated by Heisenberg exchange, but often complemented by anisotropic and/or higher-order interactions. In large magnetic clusters, which may potentially deal with a dozen or more spin centers, there is the possibility of novel many-body quantum states and quantum phenomena. In this review the necessary theoretical concepts and experimental techniques to study the magnetic cluster excitations and the resulting characteristic magnetic properties are introduced, followed by examples of small clusters, demonstrating the enormous amount of detailed physical information that can be retrieved. The current understanding of the excitations and their physical interpretation in the molecular nanomagnets which represent large magnetic clusters is then presented, with a section devoted to the subclass of single-molecule magnets, distinguished by displaying quantum tunneling of the magnetization. Finally, there is a summary of some quantum many-body states which evolve in magnetic insulators characterized by built-in or field-induced magnetic clusters. The review concludes by addressing future perspectives in the field of magnetic cluster excitations.

  15. Cauchy cluster process

    DEFF Research Database (Denmark)

    Ghorbani, Mohammad

    2013-01-01

    In this paper we introduce an instance of the well-know Neyman–Scott cluster process model with clusters having a long tail behaviour. In our model the offspring points are distributed around the parent points according to a circular Cauchy distribution. Using a modified Cramér-von Misses test st...... statistic and the simulated pointwise envelopes it is shown that this model fits better than the Thomas process to the frequently analyzed long-leaf pine data-set....

  16. Parallel Wolff Cluster Algorithms

    Science.gov (United States)

    Bae, S.; Ko, S. H.; Coddington, P. D.

    The Wolff single-cluster algorithm is the most efficient method known for Monte Carlo simulation of many spin models. Due to the irregular size, shape and position of the Wolff clusters, this method does not easily lend itself to efficient parallel implementation, so that simulations using this method have thus far been confined to workstations and vector machines. Here we present two parallel implementations of this algorithm, and show that one gives fairly good performance on a MIMD parallel computer.

  17. Galaxy cluster's rotation

    CERN Document Server

    Manolopoulou, Maria

    2016-01-01

    We study the possible rotation of cluster galaxies, developing, testing and applying a novel algorithm which identifies rotation, if such does exits, as well as its rotational centre, its axis orientation, rotational velocity amplitude and, finally, the clockwise or counterclockwise direction of rotation on the plane of the sky. To validate our algorithms we construct realistic Monte-Carlo mock rotating clusters and confirm that our method provides robust indications of rotation. We then apply our methodology on a sample of Abell clusters with z<~0.1 with member galaxies selected from the SDSS DR10 spectroscopic database. We find that ~35% of our clusters are rotating when using a set of strict criteria, while loosening the criteria we find this fraction increasing to ~48%. We correlate our rotation indicators with the cluster dynamical state, provided either by their Bautz-Morgan type or by their X-ray isophotal shape and find for those clusters showing rotation that the significance and strength of their...

  18. Cluster functional renormalization group

    Science.gov (United States)

    Reuther, Johannes; Thomale, Ronny

    2014-01-01

    Functional renormalization group (FRG) has become a diverse and powerful tool to derive effective low-energy scattering vertices of interacting many-body systems. Starting from a free expansion point of the action, the flow of the RG parameter Λ allows us to trace the evolution of the effective one- and two-particle vertices towards low energies by taking into account the vertex corrections between all parquet channels in an unbiased fashion. In this work, we generalize the expansion point at which the diagrammatic resummation procedure is initiated from a free UV limit to a cluster product state. We formulate a cluster FRG scheme where the noninteracting building blocks (i.e., decoupled spin clusters) are treated exactly, and the intercluster couplings are addressed via RG. As a benchmark study, we apply our cluster FRG scheme to the spin-1/2 bilayer Heisenberg model (BHM) on a square lattice where the neighboring sites in the two layers form the individual two-site clusters. Comparing with existing numerical evidence for the BHM, we obtain reasonable findings for the spin susceptibility, the spin-triplet excitation energy, and quasiparticle weight even in coupling regimes close to antiferromagnetic order. The concept of cluster FRG promises applications to a large class of interacting electron systems.

  19. Cluster bomb ocular injuries

    Directory of Open Access Journals (Sweden)

    Ahmad M Mansour

    2012-01-01

    Full Text Available Purpose: To present the visual outcomes and ocular sequelae of victims of cluster bombs. Materials and Methods: This retrospective, multicenter case series of ocular injury due to cluster bombs was conducted for 3 years after the war in South Lebanon (July 2006. Data were gathered from the reports to the Information Management System for Mine Action. Results: There were 308 victims of clusters bombs; 36 individuals were killed, of which 2 received ocular lacerations and; 272 individuals were injured with 18 receiving ocular injury. These 18 surviving individuals were assessed by the authors. Ocular injury occurred in 6.5% (20/308 of cluster bomb victims. Trauma to multiple organs occurred in 12 of 18 cases (67% with ocular injury. Ocular findings included corneal or scleral lacerations (16 eyes, corneal foreign bodies (9 eyes, corneal decompensation (2 eyes, ruptured cataract (6 eyes, and intravitreal foreign bodies (10 eyes. The corneas of one patient had extreme attenuation of the endothelium. Conclusions: Ocular injury occurred in 6.5% of cluster bomb victims and 67% of the patients with ocular injury sustained trauma to multiple organs. Visual morbidity in civilians is an additional reason for a global ban on the use of cluster bombs.

  20. Determination of atomic cluster structure with cluster fusion algorithm

    DEFF Research Database (Denmark)

    Obolensky, Oleg I.; Solov'yov, Ilia; Solov'yov, Andrey V.

    2005-01-01

    We report an efficient scheme of global optimization, called cluster fusion algorithm, which has proved its reliability and high efficiency in determination of the structure of various atomic clusters.......We report an efficient scheme of global optimization, called cluster fusion algorithm, which has proved its reliability and high efficiency in determination of the structure of various atomic clusters....

  1. Cluster fusion algorithm: application to Lennard-Jones clusters

    DEFF Research Database (Denmark)

    Solov'yov, Ilia; Solov'yov, Andrey V.; Greiner, Walter

    2008-01-01

    We present a new general theoretical framework for modelling the cluster structure and apply it to description of the Lennard-Jones clusters. Starting from the initial tetrahedral cluster configuration, adding new atoms to the system and absorbing its energy at each step, we find cluster growing...... paths up to the cluster size of 150 atoms. We demonstrate that in this way all known global minima structures of the Lennard-Jones clusters can be found. Our method provides an efficient tool for the calculation and analysis of atomic cluster structure. With its use we justify the magic number sequence...... for the clusters of noble gas atoms and compare it with experimental observations. We report the striking correspondence of the peaks in the dependence of the second derivative of the binding energy per atom on cluster size calculated for the chain of the Lennard-Jones clusters based on the icosahedral symmetry...

  2. Cluster fusion algorithm: application to Lennard-Jones clusters

    DEFF Research Database (Denmark)

    Solov'yov, Ilia; Solov'yov, Andrey V.; Greiner, Walter

    2006-01-01

    We present a new general theoretical framework for modelling the cluster structure and apply it to description of the Lennard-Jones clusters. Starting from the initial tetrahedral cluster configuration, adding new atoms to the system and absorbing its energy at each step, we find cluster growing...... paths up to the cluster size of 150 atoms. We demonstrate that in this way all known global minima structures of the Lennard-Jones clusters can be found. Our method provides an efficient tool for the calculation and analysis of atomic cluster structure. With its use we justify the magic number sequence...... for the clusters of noble gas atoms and compare it with experimental observations. We report the striking correspondence of the peaks in the dependence of the second derivative of the binding energy per atom on cluster size calculated for the chain of the Lennard-Jones clusters based on the icosahedral symmetry...

  3. Subspace K-means clustering

    NARCIS (Netherlands)

    Timmerman, Marieke E.; Ceulemans, Eva; De Roover, Kim; Van Leeuwen, Karla

    2013-01-01

    To achieve an insightful clustering of multivariate data, we propose subspace K-means. Its central idea is to model the centroids and cluster residuals in reduced spaces, which allows for dealing with a wide range of cluster types and yields rich interpretations of the clusters. We review the existi

  4. Cluster Implantation and Deposition Apparatus

    DEFF Research Database (Denmark)

    Hanif, Muhammad; Popok, Vladimir

    2015-01-01

    In the current report, a design and capabilities of a cluster implantation and deposition apparatus (CIDA) involving two different cluster sources are described. The clusters produced from gas precursors (Ar, N etc.) by PuCluS-2 can be used to study cluster ion implantation in order to develop...... contributions to the theory of cluster stopping in matter as well as for practical applications requiring ultra-shallow implantation and modification of surfaces on the nanoscale. Metal clusters from the magnetron cluster source are of interest for the production of optical sensors to detect specific biological...

  5. Stellar populations in star clusters

    CERN Document Server

    Li, Chengyuan; Deng, Licai

    2016-01-01

    Stellar populations contain the most important information about star clus- ter formation and evolution. Until several decades ago, star clusters were believed to be ideal laboratories for studies of simple stellar populations (SSPs). However, discoveries of multiple stellar populations in Galactic globular clusters have expanded our view on stellar populations in star clusters. They have simultaneously generated a number of controversies, particularly as to whether young star clusters may have the same origin as old globular clusters. In addition, extensive studies have revealed that the SSP scenario does not seem to hold for some intermediate-age and young star clusters either, thus making the origin of multiple stellar populations in star clusters even more complicated. Stellar population anomalies in numerous star clusters are well-documented, implying that the notion of star clusters as true SSPs faces serious challenges. In this review, we focus on stellar populations in massive clusters with different ...

  6. Clustering by Pattern Similarity

    Institute of Scientific and Technical Information of China (English)

    Hai-xun Wang; Jian Pei

    2008-01-01

    The task of clustering is to identify classes of similar objects among a set of objects. The definition of similarity varies from one clustering model to another. However, in most of these models the concept of similarity is often based on such metrics as Manhattan distance, Euclidean distance or other Lp distances. In other words, similar objects must have close values in at least a set of dimensions. In this paper, we explore a more general type of similarity. Under the pCluster model we proposed, two objects are similar if they exhibit a coherent pattern on a subset of dimensions. The new similarity concept models a wide range of applications. For instance, in DNA microarray analysis, the expression levels of two genes may rise and fall synchronously in response to a set of environmental stimuli. Although the magnitude of their expression levels may not be close, the patterns they exhibit can be very much alike. Discovery of such clusters of genes is essential in revealing significant connections in gene regulatory networks. E-commerce applications, such as collaborative filtering, can also benefit from the new model, because it is able to capture not only the closeness of values of certain leading indicators but also the closeness of (purchasing, browsing, etc.) patterns exhibited by the customers. In addition to the novel similarity model, this paper also introduces an effective and efficient algorithm to detect such clusters, and we perform tests on several real and synthetic data sets to show its performance.

  7. Chemical evolution of star clusters

    OpenAIRE

    van Loon, Jacco Th.

    2009-01-01

    I discuss the chemical evolution of star clusters, with emphasis on old globular clusters, in relation to their formation histories. Globular clusters clearly formed in a complex fashion, under markedly different conditions from any younger clusters presently known. Those special conditions must be linked to the early formation epoch of the Galaxy and must not have occurred since. While a link to the formation of globular clusters in dwarf galaxies has been suggested, present-day dwarf galaxi...

  8. Maximum-likelihood cluster recontruction

    CERN Document Server

    Bartelmann, M; Seitz, S; Schneider, P J; Bartelmann, Matthias; Narayan, Ramesh; Seitz, Stella; Schneider, Peter

    1996-01-01

    We present a novel method to recontruct the mass distribution of galaxy clusters from their gravitational lens effect on background galaxies. The method is based on a least-chisquare fit of the two-dimensional gravitational cluster potential. The method combines information from shear and magnification by the cluster lens and is designed to easily incorporate possible additional information. We describe the technique and demonstrate its feasibility with simulated data. Both the cluster morphology and the total cluster mass are well reproduced.

  9. Clustering Game Behavior Data

    DEFF Research Database (Denmark)

    Bauckhage, C.; Drachen, Anders; Sifa, Rafet

    2015-01-01

    Recent years have seen a deluge of behavioral data from players hitting the game industry. Reasons for this data surge are many and include the introduction of new business models, technical innovations, the popularity of online games, and the increasing persistence of games. Irrespective...... of the causes, the proliferation of behavioral data poses the problem of how to derive insights therefrom. Behavioral data sets can be large, time-dependent and high-dimensional. Clustering offers a way to explore such data and to discover patterns that can reduce the overall complexity of the data. Clustering...... scientists and present a review and tutorial focusing on the application of clustering techniques to mine behavioral game data. Several algorithms are reviewed and examples of their application shown. Key topics such as feature normalization are discussed and open problems in the context of game analytics...

  10. The concept of cluster

    DEFF Research Database (Denmark)

    Laursen, Lea Louise Holst; Møller, Jørgen

    2013-01-01

    villages in order to secure their future. This paper will address the concept of cluster-villages as a possible approach to strengthen the conditions of contemporary Danish villages. Cluster-villages is a concept that gather a number of villages in a network-structure where the villages both work together...... to forskellige positioner ser vi en ny mulighed for landsbyudvikling, som vi kalder Clustervillages. In order to investigate the potentials and possibilities of the cluster-village concept the paper will seek to unfold the concept strategically; looking into the benefits of such concept. Further, the paper seeks...... to inscribe the concept into the existing debate regarding villages in the rural districts....

  11. Clusters in Light Nuclei

    CERN Document Server

    Beck, C; Zafra, A Sanchez i; Thummerer, S; Azaiez, F; Bednarczyk, P; Courtin, S; Curien, D; Dorvaux, O; Goasduff, A; ~Lebhertz, D; Nourreddine, A; ~Rousseau, M; Salsac, M -D; von Oertzen, W; Gebauer, B; Wheldon, C; Kokalova, Tz; Efimov, G; Zherebchevsky, V; Schulz, Ch; Bohlen, H G; Kamanin, D; de Angelis, G; Gadea, A; Lenzi, S; Napoli, D R; Szilner, S; Milin, M; Catford, W N; Jenkins, D G; Royer, G

    2010-01-01

    A great deal of research work has been undertaken in the alpha-clustering study since the pioneering discovery, half a century ago, of 12C+12C molecular resonances. Our knowledge of the field of the physics of nuclear molecules has increased considerably and nuclear clustering remains one of the most fruitful domains of nuclear physics, facing some of the greatest challenges and opportunities in the years ahead. In this work, the occurence of "exotic" shapes in light N=Z alpha-like nuclei is investigated. Various approaches of superdeformed and hyperdeformed bands associated with quasimolecular resonant structures are presented. Results on clustering aspects are also discussed for light neutron-rich Oxygen isotopes.

  12. South Asian Cluster

    Directory of Open Access Journals (Sweden)

    Ionel Sergiu Pirju

    2014-12-01

    Full Text Available This article aims at presenting the South Asian cluster composed of India, Indonesia, Iran and Malaysia, the intercultural values that characterizes it, the supported leadership style and tracing the main macroeconomic considerations which characterizes them. The research is synchronic, analysing the contemporary situation of these countries without reference to their evolution in time, by using the positivist paradigm that explains the reality at one point. It will be analysed the overall cluster with the existing interactions between the countries that composes it, while the article being one of information will avoid building recommendation, or new theories.

  13. I Cluster geografici

    Directory of Open Access Journals (Sweden)

    Maurizio Rosina

    2010-03-01

    Full Text Available Geographic ClustersOver the past decade, public alphanumeric database have been growing at exceptional rate. Most of data can be georeferenced, so that is possible gaining new knowledge from such databases. The contribution of this paper is two-fold. We first present a model of geographic clusters, which uses only geographic and functionally data properties. The model is useful to process huge amount of public/government data, even daily upgrading. After that, we merge the model into the framework GEOPOI (GEOcoding Points Of Interest, and show some graphic map results.

  14. Cluster-tilting theory

    OpenAIRE

    Simões, Raquel Coelho Guardado

    2008-01-01

    Tese de mestado em Matemática (Álgebra, Lógica e Fundamentos) apresentada à Universidade de Lisboa, através da Faculdade de Ciências, 2008 Resumo alargado disponível em português The notion of Cluster Algebra first appeared in 2001, in a paper by S. Fomin and A. Zelevinsky, studying the dual canonical basis of the quantum group of a finite dimensional simple Lie algebra over the complex numbers, and also total positivity for algebraic groups. Cluster categories, introduced by A. Buan, R...

  15. Kinematics of Clustering

    CERN Document Server

    Wang, Steven; Metcalfe, Guy; Wu, Jie

    2014-01-01

    The dynamical system for inertial particles in fluid flow has both attracting and repelling regions, the interplay of which can localize particles. In laminar flow experiments we find that particles, initially moving throughout the fluid domain, can undergo an instability and cluster into subdomains of the fluid when the flow Reynolds number exceeds a critical value that depends on particle and fluid inertia. We derive an expression for the instability boundary and for a universal curve that describes the clustering rate for all particles.

  16. An Emerge Approach in Inter Cluster Similarity for Quality Clusters

    Directory of Open Access Journals (Sweden)

    H. Venkateswara Reddy

    2013-04-01

    Full Text Available Relationship between the datasets is one most important issue in recent years. The recent methods are based mostly on the numerical data, but these methods are not suitable for real time data such as web pages, business transactions etc., which are known as Categorical data. It is difficult to find relationship in categorical data. In this paper, a new approach is proposed for finding the relationshipbetween the categorical data, hence to find relationship between the clusters. The main aim is to identify the quality clusters based on the relationship between clusters. If there is no relationship between clusters then those clusters are treated as quality clusters.

  17. Combining cluster number counts and galaxy clustering

    CERN Document Server

    Lacasa, Fabien

    2016-01-01

    We present a detailed modelling of the joint covariance matrix between cluster number counts and the galaxy angular power spectrum. To this end, we use a Halo Model framework complemented by a Halo Occupation Distribution model (HOD), and we work in full-sky. We demonstrate the importance of accounting for non-Gaussianity to produce accurate covariance predictions, as the Gaussian part of the covariance can in fact become subdominant in certain configurations. We discuss in particular the case of the super-sample covariance (SSC), including the effects of galaxy shot-noise, halo second order bias and non-local bias, and demonstrating interesting mathematical properties. Using the joint covariance matrix and a Fisher matrix methodology, we examine the prospects of combining these two probes to constrain cosmological and HOD parameters. We find that the combination indeed results in noticeable better constraints, in particular because the cross-covariance introduces a synergy between the probes on small scales....

  18. Skeletal Muscle and Liver Lipidomics and the Regulation of FAT/CD36

    DEFF Research Database (Denmark)

    Jordy, Andreas Børsting

    . This peripheral intramyocellular and intrahepatic lipid accumulation is associated with tissue-specific and whole body insulin resistance and, in the case of the liver non-alcoholic fatty liver disease. Studies show that regular exercise can reduce hepatic lipid content and enhance liver health. In high-fat diet...... that the current worldwide obesity epidemic has resulted in the increased prevalence of “metabolic disease clusters”, including type 2 diabetes, fatty liver disease and dyslipidemia. Excessive plasma lipids can result in the accumulation of lipid metabolites at ectopic sites including skeletal muscle and liver...... induced obesity in mice, we observed an increased muscle and liver lipid content, analyzed by mass spectrometry, concomitant with decreased glucose tolerance. We observed that treadmill exercise-training in high-fat fed mice resulted in a reduction in the lipid content in the liver, but not in muscle...

  19. Rspo2 suppresses CD36-mediated apoptosis in oxidized low density lipoprotein-induced macrophages

    OpenAIRE

    2016-01-01

    Oxidized low density lipoprotein (oxLDL)-induced apoptosis of macrophages contributes to the formation of atherosclerotic plaques. R-spondin 2 (Rspo2), a member of the cysteine-rich secreted proteins, has been shown to be involved in the oncogenesis of several types of cancer. It has also been found to be abundantly expressed among the four R-spondin members in macrophages. The present study was performed to determine whether Rspo2 is involved in the ox-LDL-induced apoptosis of macrophages. I...

  20. Localized attack on clustering networks

    CERN Document Server

    Dong, Gaogao; Du, Ruijin; Shao, Shuai; Stanley, H Eugene; Shlomo, Havlin

    2016-01-01

    Clustering network is one of which complex network attracting plenty of scholars to discuss and study the structures and cascading process. We primarily analyzed the effect of clustering coefficient to other various of the single clustering network under localized attack. These network models including double clustering network and star-like NON with clustering and random regular (RR) NON of ER networks with clustering are made up of at least two networks among which exist interdependent relation among whose degree of dependence is measured by coupling strength. We show both analytically and numerically, how the coupling strength and clustering coefficient effect the percolation threshold, size of giant component, critical coupling point where the behavior of phase transition changes from second order to first order with the increase of coupling strength between the networks. Last, we study the two types of clustering network: one type is same with double clustering network in which each subnetwork satisfies ...

  1. Clustering of resting state networks.

    Directory of Open Access Journals (Sweden)

    Megan H Lee

    Full Text Available BACKGROUND: The goal of the study was to demonstrate a hierarchical structure of resting state activity in the healthy brain using a data-driven clustering algorithm. METHODOLOGY/PRINCIPAL FINDINGS: The fuzzy-c-means clustering algorithm was applied to resting state fMRI data in cortical and subcortical gray matter from two groups acquired separately, one of 17 healthy individuals and the second of 21 healthy individuals. Different numbers of clusters and different starting conditions were used. A cluster dispersion measure determined the optimal numbers of clusters. An inner product metric provided a measure of similarity between different clusters. The two cluster result found the task-negative and task-positive systems. The cluster dispersion measure was minimized with seven and eleven clusters. Each of the clusters in the seven and eleven cluster result was associated with either the task-negative or task-positive system. Applying the algorithm to find seven clusters recovered previously described resting state networks, including the default mode network, frontoparietal control network, ventral and dorsal attention networks, somatomotor, visual, and language networks. The language and ventral attention networks had significant subcortical involvement. This parcellation was consistently found in a large majority of algorithm runs under different conditions and was robust to different methods of initialization. CONCLUSIONS/SIGNIFICANCE: The clustering of resting state activity using different optimal numbers of clusters identified resting state networks comparable to previously obtained results. This work reinforces the observation that resting state networks are hierarchically organized.

  2. Clustering via Kernel Decomposition

    DEFF Research Database (Denmark)

    Have, Anna Szynkowiak; Girolami, Mark A.; Larsen, Jan

    2006-01-01

    Methods for spectral clustering have been proposed recently which rely on the eigenvalue decomposition of an affinity matrix. In this work it is proposed that the affinity matrix is created based on the elements of a non-parametric density estimator. This matrix is then decomposed to obtain poste...

  3. Detecting alternative graph clusterings.

    Science.gov (United States)

    Mandala, Supreet; Kumara, Soundar; Yao, Tao

    2012-07-01

    The problem of graph clustering or community detection has enjoyed a lot of attention in complex networks literature. A quality function, modularity, quantifies the strength of clustering and on maximization yields sensible partitions. However, in most real world networks, there are an exponentially large number of near-optimal partitions with some being very different from each other. Therefore, picking an optimal clustering among the alternatives does not provide complete information about network topology. To tackle this problem, we propose a graph perturbation scheme which can be used to identify an ensemble of near-optimal and diverse clusterings. We establish analytical properties of modularity function under the perturbation which ensures diversity. Our approach is algorithm independent and therefore can leverage any of the existing modularity maximizing algorithms. We numerically show that our methodology can systematically identify very different partitions on several existing data sets. The knowledge of diverse partitions sheds more light into the topological organization and helps gain a more complete understanding of the underlying complex network.

  4. Extended Fuzzy Clustering Algorithms

    NARCIS (Netherlands)

    U. Kaymak (Uzay); M. Setnes

    2000-01-01

    textabstractFuzzy clustering is a widely applied method for obtaining fuzzy models from data. It has been applied successfully in various fields including finance and marketing. Despite the successful applications, there are a number of issues that must be dealt with in practical applications of fuz

  5. Cluster headaches simulating parasomnias.

    Science.gov (United States)

    Isik, Ugur; D'Cruz, O 'Neill F

    2002-09-01

    Nocturnal episodes of agitated arousal in otherwise healthy young children are often related to nonrapid eye movement parasomnias (night terrors). However, in patients with acute onset or increased frequency of parasomnias, organic causes of discomfort must be excluded. We report four young children whose parasomnias were caused by nocturnal cluster headaches and who responded to indomethacin dramatically.

  6. Dettagli utilizzo cluster INTEL

    OpenAIRE

    2012-01-01

    Dall'inizio dell'anno 2004 il CILEA ospita e gestisce un cluster di processori Intel a 32 bit denominato avogadro. Esso é costituito da 128 nodi biprocessori Intel Xeon 3.06 GHz. L'articolo intende presentare le problematiche relative all'utilizzo della macchina processore fornendo le istruzioni operative necessarie all'uso più efficace.

  7. Fuzzy clustering of mechanisms

    Indian Academy of Sciences (India)

    Amitabha Ghosh; Dilip Kumar Pratihar; M V V Amarnath; Guenter Dittrich; Jorg Mueller

    2012-10-01

    During the course of development of Mechanical Engineering, a large number of mechanisms (that is, linkages to perform various types of tasks) have been conceived and developed. Quite a few atlases and catalogues were prepared by the designers of machines and mechanical systems. However, often it is felt that a clustering technique for handling the list of large number of mechanisms can be very useful,if it is developed based on a scientific principle. In this paper, it has been shown that the concept of fuzzy sets can be conveniently used for this purpose, if an adequate number of properly chosen attributes (also called characteristics) are identified. Using two clustering techniques, the mechanisms have been classified in the present work and in future, it may be extended to develop an expert system, which can automate type synthesis phase of mechanical design. To the best of the authors’ knowledge, this type of clustering of mechanisms has not been attempted before. Thus, this is the first attempt to cluster the mechanisms based on some quantitative measures. It may help the engineers to carry out type synthesis of the mechanisms.

  8. Emergence of regional clusters

    DEFF Research Database (Denmark)

    Dahl, Michael S.; Østergaard, Christian Richter; Dalum, Bent

    2010-01-01

    The literature on regional clusters has increased considerably during the last decade. The emergence and growth patterns are usually explained by such factors as unique local culture, regional capabilities, tacit knowledge or the existence of location-specific externalities (knowledge spillovers,...

  9. PVM Support for Clusters

    Science.gov (United States)

    Springer, P.

    2000-01-01

    The latest version of PVM (3.4.3) now contains support for a PC cluster running Linux, also known as a Beowulf system. A PVM user of a computer outside the Beowulf system can add the Beowulf as a single machine.

  10. Hybrid cluster identification

    Science.gov (United States)

    Martín-Herrero, J.

    2004-10-01

    I present a hybrid method for the labelling of clusters in two-dimensional lattices, which combines the recursive approach with iterative scanning to reduce the stack size required by the pure recursive technique, while keeping its benefits: single pass and straightforward cluster characterization and percolation detection parallel to the labelling. While the capacity to hold the entire lattice in memory is usually regarded as the major constraint for the applicability of the recursive technique, the required stack size is the real limiting factor. Resorting to recursion only for the transverse direction greatly reduces the recursion depth and therefore the required stack. It also enhances the overall performance of the recursive technique, as is shown by results on a set of uniform random binary lattices and on a set of samples of the Ising model. I also show how this technique may replace the recursive technique in Wolff's cluster algorithm, decreasing the risk of stack overflow and increasing its speed, and the Hoshen-Kopelman algorithm in the Swendsen-Wang cluster algorithm, allowing effortless characterization during generation of the samples and increasing its speed.

  11. Resolved SZE Cluster Count

    Institute of Scientific and Technical Information of China (English)

    Jia-Yu Tang; Zu-Hui Fan

    2003-01-01

    We study the counts of resolved SZE (Sunyaev-Zel'dovich effect) clus-ters expected from an interferometric survey in different cosmological models underdifferent conditions. The self-similar universal gas model and Press-Schechter massfunction are used. We take the observing frequency to be 90 GHz, and consider twodish diameters, 1.2 m and 2.5 m. We calculate the number density of the galaxyclusters dN/(dΩdz) at a high flux limit Slimv = 100mJy and at a relative lowSlimv = 10 mJy. The total numbers of SZE clusters N in two low-Ω0 models arecompared. The results show that the influence of the resolved effect depends notonly on D, but also on Slimv: at a given D, the effect is more significant for a highthan for a low Slim Also, the resolved effect for a flat universe is more impressivethan that for an open universe. For D = 1.2m and Slimv= 10mJy, the resolvedeffect is very weak. Considering the designed interferometers which will be used tosurvey SZE clusters, we find that the resolved effect is insignificant when estimatingthe expected yield of the SZE cluster surveys.

  12. Clustering under Perturbation Resilience

    CERN Document Server

    Balcan, Maria Florina

    2011-01-01

    Recently, Bilu and Linial \\cite{BL} formalized an implicit assumption often made when choosing a clustering objective: that the optimum clustering to the objective should be preserved under small multiplicative perturbations to distances between points. They showed that for max-cut clustering it is possible to circumvent NP-hardness and obtain polynomial-time algorithms for instances resilient to large (factor $O(\\sqrt{n})$) perturbations, and subsequently Awasthi et al. \\cite{ABS10} considered center-based objectives, giving algorithms for instances resilient to O(1) factor perturbations. In this paper, we greatly advance this line of work. For the $k$-median objective, we present an algorithm that can optimally cluster instances resilient to $(1 + \\sqrt{2})$-factor perturbations, solving an open problem of Awasthi et al.\\cite{ABS10}. We additionally give algorithms for a more relaxed assumption in which we allow the optimal solution to change in a small $\\epsilon$ fraction of the points after perturbation. ...

  13. Data clustering algorithms and applications

    CERN Document Server

    Aggarwal, Charu C

    2013-01-01

    Research on the problem of clustering tends to be fragmented across the pattern recognition, database, data mining, and machine learning communities. Addressing this problem in a unified way, Data Clustering: Algorithms and Applications provides complete coverage of the entire area of clustering, from basic methods to more refined and complex data clustering approaches. It pays special attention to recent issues in graphs, social networks, and other domains.The book focuses on three primary aspects of data clustering: Methods, describing key techniques commonly used for clustering, such as fea

  14. Quartile Clustering: A quartile based technique for Generating Meaningful Clusters

    CERN Document Server

    Goswami, Saptarsi

    2012-01-01

    Clustering is one of the main tasks in exploratory data analysis and descriptive statistics where the main objective is partitioning observations in groups. Clustering has a broad range of application in varied domains like climate, business, information retrieval, biology, psychology, to name a few. A variety of methods and algorithms have been developed for clustering tasks in the last few decades. We observe that most of these algorithms define a cluster in terms of value of the attributes, density, distance etc. However these definitions fail to attach a clear meaning/semantics to the generated clusters. We argue that clusters having understandable and distinct semantics defined in terms of quartiles/halves are more appealing to business analysts than the clusters defined by data boundaries or prototypes. On the samepremise, we propose our new algorithm named as quartile clustering technique. Through a series of experiments we establish efficacy of this algorithm. We demonstrate that the quartile clusteri...

  15. Cluster-lensing: A Python Package for Galaxy Clusters & Miscentering

    OpenAIRE

    Ford, Jes; VanderPlas, Jake

    2016-01-01

    We describe a new open source package for calculating properties of galaxy clusters, including NFW halo profiles with and without the effects of cluster miscentering. This pure-Python package, cluster-lensing, provides well-documented and easy-to-use classes and functions for calculating cluster scaling relations, including mass-richness and mass-concentration relations from the literature, as well as the surface mass density $\\Sigma(R)$ and differential surface mass density $\\Delta\\Sigma(R)$...

  16. The rotation of Galaxy Clusters

    CERN Document Server

    Tovmassian, Hrant M

    2015-01-01

    The method for detection of the galaxy cluster rotation based on the study of distribution of member galaxies with velocities lower and higher of the cluster mean velocity over the cluster image is proposed. The search for rotation is made for flat clusters with $a/b>1.8$ and BMI type clusters which are expected to be rotating. For comparison there were studied also round clusters and clusters of NBMI type, the second by brightness galaxy in which does not differ significantly from the cluster cD galaxy. Seventeen out of studied 65 clusters are found to be rotating. It was found that the detection rate is sufficiently high for flat clusters, over 60\\%, and clusters of BMI type with dominant cD galaxy, ~ 35%. The obtained results show that clusters were formed from the huge primordial gas clouds and preserved the rotation of the primordial clouds, unless they did not have merging with other clusters and groups of galaxies, in the result of which the rotation has been prevented.

  17. Photoionization of rare gas clusters

    Science.gov (United States)

    Zhang, Huaizhen

    This thesis concentrates on the study of photoionization of van der Waals clusters with different cluster sizes. The goal of the experimental investigation is to understand the electronic structure of van der Waals clusters and the electronic dynamics. These studies are fundamental to understand the interaction between UV-X rays and clusters. The experiments were performed at the Advanced Light Source at Lawrence Berkeley National Laboratory. The experimental method employs angle-resolved time-of-flight photoelectron spectrometry, one of the most powerful methods for probing the electronic structure of atoms, molecules, clusters and solids. The van der Waals cluster photoionization studies are focused on probing the evolution of the photoelectron angular distribution parameter as a function of photon energy and cluster size. The angular distribution has been known to be a sensitive probe of the electronic structure in atoms and molecules. However, it has not been used in the case of van der Waals clusters. We carried out outer-valence levels, inner-valence levels and core-levels cluster photoionization experiments. Specifically, this work reports on the first quantitative measurements of the angular distribution parameters of rare gas clusters as a function of average cluster sizes. Our findings for xenon clusters is that the overall photon-energy-dependent behavior of the photoelectrons from the clusters is very similar to that of the corresponding free atoms. However, distinct differences in the angular distribution point at cluster-size-dependent effects were found. For krypton clusters, in the photon energy range where atomic photoelectrons have a high angular anisotropy, our measurements show considerably more isotropic angular distributions for the cluster photoelectrons, especially right above the 3d and 4p thresholds. For the valence electrons, a surprising difference between the two spin-orbit components was found. For argon clusters, we found that the

  18. Single-cluster dynamics for the random-cluster model

    NARCIS (Netherlands)

    Deng, Y.; Qian, X.; Blöte, H.W.J.

    2009-01-01

    We formulate a single-cluster Monte Carlo algorithm for the simulation of the random-cluster model. This algorithm is a generalization of the Wolff single-cluster method for the q-state Potts model to noninteger values q>1. Its results for static quantities are in a satisfactory agreement with those

  19. Eclipsing binaries in open clusters

    DEFF Research Database (Denmark)

    Southworth, John; Clausen, J.V.

    2006-01-01

    Stars: fundamental parameters - Stars : binaries : eclipsing - Stars: Binaries: spectroscopic - Open clusters and ass. : general Udgivelsesdato: 5 August......Stars: fundamental parameters - Stars : binaries : eclipsing - Stars: Binaries: spectroscopic - Open clusters and ass. : general Udgivelsesdato: 5 August...

  20. Cluster Based Text Classification Model

    DEFF Research Database (Denmark)

    Nizamani, Sarwat; Memon, Nasrullah; Wiil, Uffe Kock

    2011-01-01

    We propose a cluster based classification model for suspicious email detection and other text classification tasks. The text classification tasks comprise many training examples that require a complex classification model. Using clusters for classification makes the model simpler and increases...

  1. Chemical evolution of star clusters

    CERN Document Server

    van Loon, Jacco Th

    2009-01-01

    I discuss the chemical evolution of star clusters, with emphasis on old globular clusters, in relation to their formation histories. Globular clusters clearly formed in a complex fashion, under markedly different conditions from any younger clusters presently known. Those special conditions must be linked to the early formation epoch of the Galaxy and must not have occurred since. While a link to the formation of globular clusters in dwarf galaxies has been suggested, present-day dwarf galaxies are not representative of the gravitational potential wells within which the globular clusters formed. Instead, a formation deep within the proto-Galaxy or within dark-matter minihaloes might be favoured. Not all globular clusters may have formed and evolved similarly. In particular, we may need to distinguish Galactic halo from Galactic bulge clusters.

  2. Nuclear Cluster Aspects in Astrophysics

    Science.gov (United States)

    Kubono, Shigeru

    2010-03-01

    The role of nuclear clustering is discussed for nucleosynthesis in stellar evolution with Cluster Nucleosynthesis Diagram (CND) proposed before. Special emphasis is placed on α-induced stellar reactions together with molecular states for O and C burning.

  3. Radio observations of Planck clusters

    CERN Document Server

    Kale, Ruta

    2012-01-01

    Recently, a number of new galaxy clusters have been detected by the ESA-Planck satellite, the South Pole Telescope and the Atacama Cosmology Telescope using the Sunyaev-Zeldovich effect. Several of the newly detected clusters are massive, merging systems with disturbed morphology in the X-ray surface brightness. Diffuse radio sources in clusters, called giant radio halos and relics, are direct probes of cosmic rays and magnetic fields in the intra-cluster medium. These radio sources are found to occur mainly in massive merging clusters. Thus, the new SZ-discovered clusters are good candidates to search for new radio halos and relics. We have initiated radio observations of the clusters detected by Planck with the Giant Metrewave Radio Telescope. These observations have already led to the detection of a radio halo in PLCKG171.9-40.7, the first giant halo discovered in one of the new Planck clusters.

  4. Hierarchical Formation of Galactic Clusters

    CERN Document Server

    Elmegreen, B G

    2006-01-01

    Young stellar groupings and clusters have hierarchical patterns ranging from flocculent spiral arms and star complexes on the largest scale to OB associations, OB subgroups, small loose groups, clusters and cluster subclumps on the smallest scales. There is no obvious transition in morphology at the cluster boundary, suggesting that clusters are only the inner parts of the hierarchy where stars have had enough time to mix. The power-law cluster mass function follows from this hierarchical structure: n(M_cl) M_cl^-b for b~2. This value of b is independently required by the observation that the summed IMFs from many clusters in a galaxy equals approximately the IMF of each cluster.

  5. Observations of Distant Clusters

    Science.gov (United States)

    Donahue, Megan

    2004-01-01

    The is the proceedings and papers supported by the LTSA grant: Homer, D. J.\\& Donahue, M. 2003, in "The Emergence of Cosmic Structure": 13'h Astrophysics Conference Proceedings, Vol. 666,3 1 1-3 14, (AIP). Baumgartner, W. H., Loewenstein, M., Horner, D. J., Mushotzky, R. F. 2003, HEAD- AAS, 35.3503. Homer, D. J. , Donahue, M., Voit G. M. 2003, HEAD-AAS, 35.1309. Nowak, M. A., Smith, B., Donahue, M., Stocke, J. 2003, HEAD-AAS, 35.1316. Scott, D., Borys, C., Chapman, S. C., Donahue, M., Fahlman, G. G., Halpem, M. Newbury, P. 2002, AAS, 128.01. Jones, L. R. et al. 2002, A new era in cosmology, ASP Conference Proceedings, Vol. 283, p. 223 Donahue, M., Daly, R. A., Homer, D. J. 2003, ApJ, 584, 643, Constraints on the Cluster Environments and Hotspot magnetic field strengths for radio sources 3280 and 3254. Donahue, M., et al. 2003, ApJ, 598, 190. The mass, baryonic fraction, and x-ray temperature of the luminous, high-redshift cluster of galaxies MS045 1.6-0305 Perlman, E. S. et al. 2002, ApJS, 140, 256. Smith, B. J., Nowak, M., Donahue, M., Stocke, J. 2003, AJ, 126, 1763. Chandra Observations of the Interacting NGC44 10 Group of Galaxies. Postman, M., Lauer, T. R., Oegerle, W., Donahue, M. 2002, ApJ, 579, 93. The KPNO/deep-range cluster survey I. The catalog and space density of intermediate-redshift clusters. Molnar, S. M., Hughes, J. P., Donahue, M., Joy, M. 2002, ApJ, 573, L91, Chandra Observations of Unresolved X-Ray Sources around Two Clusters of Galaxies. Donahue, M., Mack, J., 2002 NewAR, 46, 155, HST NIcmos and WFPC2 observations of molecular hydrogen and dust around cooling flows. Koekemoer, A. M. et al. 2002 NewAR, 46, 149, Interactions between the A2597 central radio source and dense gas host galaxy. Donahue, M. et al. 2002 ApJ, 569,689, Distant cluster hunting II.

  6. Practical Introduction to Clustering Data

    CERN Document Server

    Hartmann, Alexander K

    2016-01-01

    Data clustering is an approach to seek for structure in sets of complex data, i.e., sets of "objects". The main objective is to identify groups of objects which are similar to each other, e.g., for classification. Here, an introduction to clustering is given and three basic approaches are introduced: the k-means algorithm, neighbour-based clustering, and an agglomerative clustering method. For all cases, C source code examples are given, allowing for an easy implementation.

  7. Textile Industrial Clusters in China

    Institute of Scientific and Technical Information of China (English)

    Nie Ting

    2010-01-01

    @@ "National Textile Industry Cluster Development Seminar" convened,held by China National Textile and Apparel Council,23 cities and towns were awarded as China's Textile Industry Cluster Pilot District.By far,China's textile industrial clusters have grown to 164,which indicate a quick and gorgeous development.These textile industrial clusters have a great impact on the local economy and even the whole national textile industry's development.

  8. The Assembly of Galaxy Clusters

    Energy Technology Data Exchange (ETDEWEB)

    Berrier, Joel C.; Stewart, Kyle R.; Bullock, James S.; Purcell, Chris W.; Barton, Elizabeth J.; Wechsler, Risa H.

    2008-05-16

    We study the formation of fifty-three galaxy cluster-size dark matter halos (M = 10{sup 14.0-14.76} M{sub {circle_dot}}) formed within a pair of cosmological {Lambda}CDM N-body simulations, and track the accretion histories of cluster subhalos with masses large enough to host {approx} 0.1L{sub *} galaxies. By associating subhalos with cluster galaxies, we find the majority of galaxies in clusters experience no 'pre-processing' in the group environment prior to their accretion into the cluster. On average, {approx} 70% of cluster galaxies fall into the cluster potential directly from the field, with no luminous companions in their host halos at the time of accretion; and less than {approx} 12% are accreted as members of groups with five or more galaxies. Moreover, we find that cluster galaxies are significantly less likely to have experienced a merger in the recent past ({approx}< 6 Gyr) than a field halo of the same mass. These results suggest that local, cluster processes like ram-pressure stripping, galaxy harassment, or strangulation play the dominant role in explaining the difference between cluster and field populations at a fixed stellar mass; and that pre-evolution or past merging in the group environment is of secondary importance for setting cluster galaxy properties for most clusters. The accretion times for z = 0 cluster members are quite extended, with {approx} 20% incorporated into the cluster halo more than 7 Gyr ago and {approx} 20% within the last 2 Gyr. By comparing the observed morphological fractions in cluster and field populations, we estimate an approximate time-scale for late-type to early-type transformation within the cluster environment to be {approx} 6 Gyr.

  9. Massive star clusters in galaxies

    CERN Document Server

    Harris, William E

    2009-01-01

    The ensemble of all star clusters in a galaxy constitutes its star cluster system. In this review, the focus of the discussion is on the ability of star clusters, particularly the systems of old massive globular clusters (GCSs), to mark the early evolutionary history of galaxies. I review current themes and key findings in GCS research, and highlight some of the outstanding questions that are emerging from recent work.

  10. On clusters and clustering from atoms to fractals

    CERN Document Server

    Reynolds, PJ

    1993-01-01

    This book attempts to answer why there is so much interest in clusters. Clusters occur on all length scales, and as a result occur in a variety of fields. Clusters are interesting scientifically, but they also have important consequences technologically. The division of the book into three parts roughly separates the field into small, intermediate, and large-scale clusters. Small clusters are the regime of atomic and molecular physics and chemistry. The intermediate regime is the transitional regime, with its characteristics including the onset of bulk-like behavior, growth and aggregation, a

  11. Uncertainties in the cluster-cluster correlation function

    Energy Technology Data Exchange (ETDEWEB)

    Ling, E.N.; Barrow, J.D.; Frenk, C.S.

    1986-12-01

    The bootstrap resampling technique is applied to estimate sampling errors and significance levels of the two-point correlation functions determined for a subset of the CfA redshift survey of galaxies and a redshift sample of 104 Abell clusters. The angular correlation functions is also calculated for a sample of 1664 Abell clusters. The standard errors for the Abell data are found to be considerably larger than quoted 'Poisson errors'. The enhancement of cluster clustering over galaxy clustering is statistically significant in the presence of resampling errors.

  12. Recovery Rate of Clustering Algorithms

    NARCIS (Netherlands)

    Li, Fajie; Klette, Reinhard; Wada, T; Huang, F; Lin, S

    2009-01-01

    This article provides a simple and general way for defining the recovery rate of clustering algorithms using a given family of old clusters for evaluating the performance of the algorithm when calculating a family of new clusters. Under the assumption of dealing with simulated data (i.e., known old

  13. Geographic Projection of Cluster Composites

    NARCIS (Netherlands)

    Nerbonne, J.; Bosveld-de Smet, L.M.; Kleiweg, P.; Blackwell, A.; Marriott, K.; Shimojima, A.

    2004-01-01

    A composite cluster map displays a fuzzy categorisation of geographic areas. It combines information from several sources to provide a visualisation of the significance of cluster borders. The basic technique renders the chance that two neighbouring locations are members of different clusters as the

  14. Privacy-preserving distributed clustering

    NARCIS (Netherlands)

    Erkin, Z.; Veugen, T.; Toft, T.; Lagendijk, R.L.

    2013-01-01

    Clustering is a very important tool in data mining and is widely used in on-line services for medical, financial and social environments. The main goal in clustering is to create sets of similar objects in a data set. The data set to be used for clustering can be owned by a single entity, or in some

  15. Stellar populations in star clusters

    Science.gov (United States)

    Li, Cheng-Yuan; de Grijs, Richard; Deng, Li-Cai

    2016-12-01

    Stellar populations contain the most important information about star cluster formation and evolution. Until several decades ago, star clusters were believed to be ideal laboratories for studies of simple stellar populations (SSPs). However, discoveries of multiple stellar populations in Galactic globular clusters have expanded our view on stellar populations in star clusters. They have simultaneously generated a number of controversies, particularly as to whether young star clusters may have the same origin as old globular clusters. In addition, extensive studies have revealed that the SSP scenario does not seem to hold for some intermediate-age and young star clusters either, thus making the origin of multiple stellar populations in star clusters even more complicated. Stellar population anomalies in numerous star clusters are well-documented, implying that the notion of star clusters as true SSPs faces serious challenges. In this review, we focus on stellar populations in massive clusters with different ages. We present the history and progress of research in this active field, as well as some of the most recent improvements, including observational results and scenarios that have been proposed to explain the observations. Although our current ability to determine the origin of multiple stellar populations in star clusters is unsatisfactory, we propose a number of promising projects that may contribute to a significantly improved understanding of this subject.

  16. Clustering Objects from Multiple Collections

    NARCIS (Netherlands)

    Hollink, V.; Someren, M. van; Boer, V. de

    2009-01-01

    Clustering methods cluster objects on the basis of a similarity measure between the objects. In clustering tasks where the objects come from more than one collection often part of the similarity results from features that are related to the collections rather than features that are relevant for the

  17. Clustering objects from multiple collections

    NARCIS (Netherlands)

    Hollink, V.; van Someren, M.; de Boer, V.

    2009-01-01

    Clustering methods cluster objects on the basis of a similarity measure between the objects. In clustering tasks where the objects come from more than one collection often part of the similarity results from features that are related to the collections rather than features that are relevant for the

  18. Outskirts of Galaxy Clusters

    CERN Document Server

    Reiprich, Thomas H; Ettori, Stefano; Israel, Holger; Lovisari, Lorenzo; Molendi, Silvano; Pointecouteau, Etienne; Roncarelli, Mauro

    2013-01-01

    Until recently, only about 10% of the total intracluster gas volume had been studied with high accuracy, leaving a vast region essentially unexplored. This is now changing and a wide area of hot gas physics and chemistry awaits discovery in galaxy cluster outskirts. Also, robust large-scale total mass profiles and maps are within reach. First observational and theoretical results in this emerging field have been achieved in recent years with sometimes surprising findings. Here, we summarize and illustrate the relevant underlying physical and chemical processes and review the recent progress in X-ray, Sunyaev--Zel'dovich, and weak gravitational lensing observations of cluster outskirts, including also brief discussions of technical challenges and possible future improvements.

  19. Refractory chronic cluster headache

    DEFF Research Database (Denmark)

    Mitsikostas, Dimos D; Edvinsson, Lars; Jensen, Rigmor H

    2014-01-01

    Chronic cluster headache (CCH) often resists to prophylactic pharmaceutical treatments resulting in patients' life damage. In this rare but pragmatic situation escalation to invasive management is needed but framing criteria are lacking. We aimed to reach a consensus for refractory CCH definition...... for clinical and research use. The preparation of the final consensus followed three stages. Internal between authors, a larger between all European Headache Federation members and finally an international one among all investigators that have published clinical studies on cluster headache the last five years....... Eighty-five investigators reached by email. Proposed criteria were in the format of the International Classification of Headache Disorders III-beta (description, criteria, notes, comments and references). Following this evaluation eight drafts were prepared before the final. Twenty-four (28...

  20. Are megaquakes clustered?

    CERN Document Server

    Daub, Eric G; Guyer, Robert A; Johnson, Paul A

    2012-01-01

    We study statistical properties of the number of large earthquakes over the past century. We analyze the cumulative distribution of the number of earthquakes with magnitude larger than threshold M in time interval T, and quantify the statistical significance of these results by simulating a large number of synthetic random catalogs. We find that in general, the earthquake record cannot be distinguished from a process that is random in time. This conclusion holds whether aftershocks are removed or not, except at magnitudes below M = 7.3. At long time intervals (T = 2-5 years), we find that statistically significant clustering is present in the catalog for lower magnitude thresholds (M = 7-7.2). However, this clustering is due to a large number of earthquakes on record in the early part of the 20th century, when magnitudes are less certain.

  1. Astrophysics of galaxy clusters

    Science.gov (United States)

    Ettori, Stefano

    2016-07-01

    As the nodes of the cosmic web, clusters of galaxies trace the large-scale distribution of matter in the Universe. They are thus privileged sites in which to investigate the complex physics of structure formation. However, the complete story of how these structures grow, and how they dissipate the gravitational and non-thermal components of their energy budget over cosmic time, is still beyond our grasp. Most of the baryons gravitationally bound to the cluster's halo is in the form of a diffuse, hot, metal-enriched plasma that radiates primarily in the X-ray band. X-ray observations of the evolving cluster population provide a unique opportunity to address such fundamental open questions as: How do hot diffuse baryons accrete and dynamically evolve in dark matter potentials? How and when was the energy that we observe in the ICM generated and distributed? Where and when are heavy elements produced and how are they circulated? We will present the ongoing activities to define the strategy on how an X-ray observatory with large collecting area and an unprecedented combination of high spectral and angular resolution, such as Athena, can address these questions.

  2. Support Policies in Clusters: Prioritization of Support Needs by Cluster Members According to Cluster Life Cycle

    Directory of Open Access Journals (Sweden)

    Gulcin Salıngan

    2012-07-01

    Full Text Available Economic development has always been a moving target. Both the national and local governments have been facing the challenge of implementing the effective and efficient economic policy and program in order to best utilize their limited resources. One of the recent approaches in this area is called cluster-based economic analysis and strategy development. This study reviews key literature and some of the cluster based economic policies adopted by different governments. Based on this review, it proposes “the cluster life cycle” as a determining factor to identify the support requirements of clusters. A survey, designed based on literature review of International Cluster support programs, was conducted with 30 participants from 3 clusters with different maturity stage. This paper discusses the results of this study conducted among the cluster members in Eskişehir- Bilecik-Kütahya Region in Turkey on the requirement of the support to foster the development of related clusters.

  3. Hipax Cluster PACS Server

    Directory of Open Access Journals (Sweden)

    Ramin Payrovi

    2007-08-01

    Full Text Available Best Performace: With our Hipax Cluster PACS Server solution we are introducing the parallel computing concept as an extremely fast software system to the PACS world. In contrast to the common PACS servers, the Hipax Cluster PACS software is not only restricted to one or two computers, but can be used on a couple of servers controlling each other."nThus, the same services can be run simultaneously on different computers. The scalable system can also be expanded subsequently without lost of per-formance by adding further processors or Hipax server units, for example, if new clients or modalities are to be connected."nMaximum Failure Security: The Cluster Server concept offers high failure security. If one of the server PCs breaks down, the services can be assumed by another Hipax server unit, temporarily. If the overload of one of the server PCs is imminent, the services will be carried out by another Hipax unit (load balancing. To increase the security, e.g. against fire, the single Hipax servers can also be located separately. This concept offers maximum security, flexibility, performance, redundancy and scalability."nThe Hipax Cluster PACS Server is easy to be administrated using a web interface. In the case of a system failure (e.g. overloading, breakdown of a server PC the system administrator receives a mes-sage via Email and is so enabled to solve the problem."nFeatures"n• Based on SQL database"n• Different services running on separate PCs"n• The Hipax Server unis are coordinated and able to control each other"n• Exponentiates the power of a cluster server to the whole PACS (more processors"n• Scalable to the demands"n• Maximum performance"n• Load balancing for optimum efficiency"n• Maximum failure security because of expo-nentiated redundancy"n• Warning Email automatically sent to the system administrator in the case of failure"n• Web interface for system configuration"n• Maintenance without shut down the system

  4. Tune Your Brown Clustering, Please

    DEFF Research Database (Denmark)

    Derczynski, Leon; Chester, Sean; Bøgh, Kenneth Sejdenfaden

    2015-01-01

    unexplored. Accordingly, we present information for practitioners on the behaviour of Brown clustering in order to assist hyper-parametre tuning, in the form of a theoretical model of Brown clustering utility. This model is then evaluated empirically in two sequence labelling tasks over two text types. We...... explore the dynamic between the input corpus size, chosen number of classes, and quality of the resulting clusters, which has an impact for any approach using Brown clustering. In every scenario that we examine, our results reveal that the values most commonly used for the clustering are sub-optimal....

  5. Stellar Snowflake Cluster

    Science.gov (United States)

    2005-01-01

    [figure removed for brevity, see original site] Figure 1 Stellar Snowflake Cluster Combined Image [figure removed for brevity, see original site] Figure 2 Infrared Array CameraFigure 3 Multiband Imaging Photometer Newborn stars, hidden behind thick dust, are revealed in this image of a section of the Christmas Tree cluster from NASA's Spitzer Space Telescope, created in joint effort between Spitzer's infrared array camera and multiband imaging photometer instruments. The newly revealed infant stars appear as pink and red specks toward the center of the combined image (fig. 1). The stars appear to have formed in regularly spaced intervals along linear structures in a configuration that resembles the spokes of a wheel or the pattern of a snowflake. Hence, astronomers have nicknamed this the 'Snowflake' cluster. Star-forming clouds like this one are dynamic and evolving structures. Since the stars trace the straight line pattern of spokes of a wheel, scientists believe that these are newborn stars, or 'protostars.' At a mere 100,000 years old, these infant structures have yet to 'crawl' away from their location of birth. Over time, the natural drifting motions of each star will break this order, and the snowflake design will be no more. While most of the visible-light stars that give the Christmas Tree cluster its name and triangular shape do not shine brightly in Spitzer's infrared eyes, all of the stars forming from this dusty cloud are considered part of the cluster. Like a dusty cosmic finger pointing up to the newborn clusters, Spitzer also illuminates the optically dark and dense Cone nebula, the tip of which can be seen towards the bottom left corner of each image. This combined image shows the presence of organic molecules mixed with dust as wisps of green, which have been illuminated by nearby star formation. The larger yellowish dots neighboring the baby red stars in the Snowflake Cluster are massive stellar infants forming from the same cloud. The blue dots

  6. Clustering Methodologies for Software Engineering

    Directory of Open Access Journals (Sweden)

    Mark Shtern

    2012-01-01

    Full Text Available The size and complexity of industrial strength software systems are constantly increasing. This means that the task of managing a large software project is becoming even more challenging, especially in light of high turnover of experienced personnel. Software clustering approaches can help with the task of understanding large, complex software systems by automatically decomposing them into smaller, easier-to-manage subsystems. The main objective of this paper is to identify important research directions in the area of software clustering that require further attention in order to develop more effective and efficient clustering methodologies for software engineering. To that end, we first present the state of the art in software clustering research. We discuss the clustering methods that have received the most attention from the research community and outline their strengths and weaknesses. Our paper describes each phase of a clustering algorithm separately. We also present the most important approaches for evaluating the effectiveness of software clustering.

  7. Optical radii of galaxy clusters

    CERN Document Server

    Girardi, M; Giuricin, G; Mardirossian, F; Mezzetti, M; Girardi, M; Biviano, A; Giuricin, G; Mardirossian, F; Mezzetti, M

    1994-01-01

    We analyze the density profiles and virial radii for a sample of 90 nearby clusters, using galaxies with available redshifts and positions. Each cluster has at least 20 redshifts measured within an Abell radius, and all the results come from galaxy sets of at least 20 members. Most of the density profiles of our clusters are well fitted by hydrostatic-isothermal-like profiles. The slopes we find for many cluster density profiles are consistent with the hypothesis that the galaxies are in equilibrium with the binding cluster potential. The virial radii correlate with the core radii at a very high significance level. The observed relationship between the two size estimates is in agreement with the theoretical one computed by using the median values of the density profile parameters fitted on our clusters. After correcting for incompleteness in our cluster sample, we provide the universal distributions functions of core and virial radii (obtained within half an Abell radius).

  8. Web Fuzzy Clustering and a Case Study

    Institute of Scientific and Technical Information of China (English)

    LIU Mao-fu; HE Jing; HE Yan-xiang; HU Hui-jun

    2004-01-01

    We combine the web usage mining and fuzzy clustering and give the concept of web fuzzy clustering, and then put forward the web fuzzy clustering processing model which is discussed in detail. Web fuzzy clustering can be used in the web users clustering and web pages clustering. In the end, a case study is given and the result has proved the feasibility of using web fuzzy clustering in web pages clustering.

  9. Hadoop cluster deployment

    CERN Document Server

    Zburivsky, Danil

    2013-01-01

    This book is a step-by-step tutorial filled with practical examples which will show you how to build and manage a Hadoop cluster along with its intricacies.This book is ideal for database administrators, data engineers, and system administrators, and it will act as an invaluable reference if you are planning to use the Hadoop platform in your organization. It is expected that you have basic Linux skills since all the examples in this book use this operating system. It is also useful if you have access to test hardware or virtual machines to be able to follow the examples in the book.

  10. Convex Decomposition Based Cluster Labeling Method for Support Vector Clustering

    Institute of Scientific and Technical Information of China (English)

    Yuan Ping; Ying-Jie Tian; Ya-Jian Zhou; Yi-Xian Yang

    2012-01-01

    Support vector clustering (SVC) is an important boundary-based clustering algorithm in multiple applications for its capability of handling arbitrary cluster shapes. However,SVC's popularity is degraded by its highly intensive time complexity and poor label performance.To overcome such problems,we present a novel efficient and robust convex decomposition based cluster labeling (CDCL) method based on the topological property of dataset.The CDCL decomposes the implicit cluster into convex hulls and each one is comprised by a subset of support vectors (SVs).According to a robust algorithm applied in the nearest neighboring convex hulls,the adjacency matrix of convex hulls is built up for finding the connected components; and the remaining data points would be assigned the label of the nearest convex hull appropriately.The approach's validation is guaranteed by geometric proofs.Time complexity analysis and comparative experiments suggest that CDCL improves both the efficiency and clustering quality significantly.

  11. Brightest Cluster Galaxies and Core Gas Density in REXCESS Clusters

    CERN Document Server

    Haarsma, D B; Donahue, M; Bruch, S; Boehringer, H; Croston, J H; Pratt, G W; Voit, G M; Arnaud, M; Pierini, D

    2009-01-01

    We investigate the relationship between brightest cluster galaxies (BCGs) and their host clusters using a sample of nearby galaxy clusters from the Representative XMM-Newton Cluster Structure Survey (REXCESS). The sample was imaged with the Southern Observatory for Astrophysical Research (SOAR) in R band to investigate the mass of the old stellar population. Using a metric radius of 12h^-1 kpc, we find that the BCG luminosity depends weakly on overall cluster mass as L_BCG \\propto M_cl^0.18+-0.07, consistent with previous work. We found that 90% of the BCGs are located within 0.035 R_500 of the peak of the X-ray emission, including all of the cool core (CC) clusters. We also found an unexpected correlation between the BCG metric luminosity and the core gas density for non-cool core (non-CC) clusters, following a power law of n_e \\propto L_BCG^2.7+-0.4 (where n_e is measured at 0.008 R_500). The correlation is not easily explained by star formation (which is weak in non-CC clusters) or overall cluster mass (wh...

  12. Query Results Clustering by Extending SPARQL with CLUSTER BY

    Science.gov (United States)

    Ławrynowicz, Agnieszka

    The task of dynamic clustering of the search results proved to be useful in the Web context, where the user often does not know the granularity of the search results in advance. The goal of this paper is to provide a declarative way for invoking dynamic clustering of the results of queries submitted over Semantic Web data. To achieve this goal the paper proposes an approach that extends SPARQL by clustering abilities. The approach introduces a new statement, CLUSTER BY, into the SPARQL grammar and proposes semantics for such extension.

  13. Active matter clusters at interfaces

    CERN Document Server

    Copenhagen, Katherine

    2016-01-01

    Collective and directed motility or swarming is an emergent phenomenon displayed by many self-organized assemblies of active biological matter such as clusters of embryonic cells during tissue development, cancerous cells during tumor formation and metastasis, colonies of bacteria in a biofilm, or even flocks of birds and schools of fish at the macro-scale. Such clusters typically encounter very heterogeneous environments. What happens when a cluster encounters an interface between two different environments has implications for its function and fate. Here we study this problem by using a mathematical model of a cluster that treats it as a single cohesive unit that moves in two dimensions by exerting a force/torque per unit area whose magnitude depends on the nature of the local environment. We find that low speed (overdamped) clusters encountering an interface with a moderate difference in properties can lead to refraction or even total internal reflection of the cluster. For large speeds (underdamped), wher...

  14. Cluster synchronization in oscillatory networks

    Science.gov (United States)

    Belykh, Vladimir N.; Osipov, Grigory V.; Petrov, Valentin S.; Suykens, Johan A. K.; Vandewalle, Joos

    2008-09-01

    Synchronous behavior in networks of coupled oscillators is a commonly observed phenomenon attracting a growing interest in physics, biology, communication, and other fields of science and technology. Besides global synchronization, one can also observe splitting of the full network into several clusters of mutually synchronized oscillators. In this paper, we study the conditions for such cluster partitioning into ensembles for the case of identical chaotic systems. We focus mainly on the existence and the stability of unique unconditional clusters whose rise does not depend on the origin of the other clusters. Also, conditional clusters in arrays of globally nonsymmetrically coupled identical chaotic oscillators are investigated. The design problem of organizing clusters into a given configuration is discussed.

  15. Connecting Remote Clusters with ATM

    Energy Technology Data Exchange (ETDEWEB)

    Hu, T.C.; Wyckoff, P.S.

    1998-10-01

    Sandia's entry into utilizing clusters of networked workstations is called Computational Plant or CPlant for short. The design of CPlant uses Ethernet to boot the individual nodes, Myrinet to communicate within a node cluster, and ATM to connect between remote clusters. This SAND document covers the work done to enable the use of ATM on the CPlant nodes in the Fall of 1997.

  16. Searches for High Redshift Clusters

    CERN Document Server

    Dickinson, M

    1996-01-01

    High redshift galaxy clusters have traditionally been a fruitful place to study galaxy evolution. I review various search strategies for finding clusters at z > 1. Most efforts to date have concentrated on the environments of distant AGN. I illustrate these with data on the cluster around 3C 324 (z=1.2) and other, more distant systems, and discuss possibilities for future surveys with large telescopes.

  17. Synchronization in complex clustered networks

    Institute of Scientific and Technical Information of China (English)

    HUANG Liang; LAI Ying-Cheng; Kwangho PARK; WANG Xingang; LAI Choy Heng; Robert A. GATENBY

    2007-01-01

    Synchronization in complex networks has been an active area of research in recent years. While much effort has been devoted to networks with the small-world and scale-free topology, structurally they are often assumed to have a single, densely connected component. Recently it has also become apparent that many networks in social, biological, and tech-nological systems are clustered, as characterized by a number (or a hierarchy) of sparsely linked clusters, each with dense and complex internal connections. Synchronization is funda-mental to the dynamics and functions of complex clustered networks, but this problem has just begun to be addressed. This paper reviews some progress in this direction by focus-ing on the interplay between the clustered topology and net-work synchronizability. In particular, there are two parame-ters characterizing a clustered network: the intra-cluster and the inter-cluster link density. Our goal is to clarify the roles of these parameters in shaping network synchronizability. By using theoretical analysis and direct numerical simulations of oscillator networks, it is demonstrated that clustered net-works with random inter-cluster links are more synchroniz-able, and synchronization can be optimized when inter-cluster and intra-cluster links match. The latter result has one coun-terintuitive implication: more links, if placed improperly, can actually lead to destruction of synchronization, even though such links tend to decrease the average network distance. It is hoped that this review will help attract attention to the fun-damental problem of clustered structures/synchronization in network science.

  18. Chemical Reactions of Silicon Clusters

    OpenAIRE

    Ramakrishna, Mushti V.; Pan, Jun

    1994-01-01

    Smalley and co-workers discovered that chemisorption reactivities of silicon clusters vary over three orders of magnitude as a function of cluster size. In particular, they found that \\Si{33}, \\Si{39}, and \\Si{45} clusters are least reactive towards various reagents compared to their immediate neighbors in size. We explain these observations based on our stuffed fullerene model. This structural model consists of bulk-like core of five atoms surrounded by fullerene-like surface. Reconstruction...

  19. Light cluster production at NICA

    CERN Document Server

    Bastian, N -U; Blaschke, D; Danielewicz, P; Ivanov, Yu B; Karpenko, Iu; Röpke, G; Rogachevsky, O; Wolter, H H

    2016-01-01

    Light cluster production at the NICA accelerator complex offers unique possibilities to use these states as "rare probes" of in-medium characteristics such as phase space occupation and early flow. In order to explain this statement, in this contribution theoretical considerations from the nuclear statistical equilibrium model and from a quantum statistical model of cluster production are supplemented with a discussion of a transport model for light cluster formation and with results from hydrodynamic simulations combined with the coalescence model.

  20. Cluster banding heat source model

    Institute of Scientific and Technical Information of China (English)

    Zhang Liguo; Ji Shude; Yang Jianguo; Fang Hongyuan; Li Yafan

    2006-01-01

    Concept of cluster banding heat source model is put forward for the problem of overmany increment steps in the process of numerical simulation of large welding structures, and expression of cluster banding heat source model is deduced based on energy conservation law.Because the expression of cluster banding heat source model deduced is suitable for random weld width, quantitative analysis of welding stress field for large welding structures which have regular welds can be made quickly.

  1. The SMART CLUSTER METHOD - adaptive earthquake cluster analysis and declustering

    Science.gov (United States)

    Schaefer, Andreas; Daniell, James; Wenzel, Friedemann

    2016-04-01

    Earthquake declustering is an essential part of almost any statistical analysis of spatial and temporal properties of seismic activity with usual applications comprising of probabilistic seismic hazard assessments (PSHAs) and earthquake prediction methods. The nature of earthquake clusters and subsequent declustering of earthquake catalogues plays a crucial role in determining the magnitude-dependent earthquake return period and its respective spatial variation. Various methods have been developed to address this issue from other researchers. These have differing ranges of complexity ranging from rather simple statistical window methods to complex epidemic models. This study introduces the smart cluster method (SCM), a new methodology to identify earthquake clusters, which uses an adaptive point process for spatio-temporal identification. Hereby, an adaptive search algorithm for data point clusters is adopted. It uses the earthquake density in the spatio-temporal neighbourhood of each event to adjust the search properties. The identified clusters are subsequently analysed to determine directional anisotropy, focussing on a strong correlation along the rupture plane and adjusts its search space with respect to directional properties. In the case of rapid subsequent ruptures like the 1992 Landers sequence or the 2010/2011 Darfield-Christchurch events, an adaptive classification procedure is applied to disassemble subsequent ruptures which may have been grouped into an individual cluster using near-field searches, support vector machines and temporal splitting. The steering parameters of the search behaviour are linked to local earthquake properties like magnitude of completeness, earthquake density and Gutenberg-Richter parameters. The method is capable of identifying and classifying earthquake clusters in space and time. It is tested and validated using earthquake data from California and New Zealand. As a result of the cluster identification process, each event in

  2. Brightest Cluster Galaxies and Core Gas Density in REXCESS Clusters

    Science.gov (United States)

    Haarsma, Deborah B.; Leisman, Luke; Donahue, Megan; Bruch, Seth; Böhringer, Hans; Croston, Judith H.; Pratt, Gabriel W.; Voit, G. Mark; Arnaud, Monique; Pierini, Daniele

    2010-04-01

    We investigate the relationship between brightest cluster galaxies (BCGs) and their host clusters using a sample of nearby galaxy clusters from the Representative XMM-Newton Cluster Structure Survey. The sample was imaged with the Southern Observatory for Astrophysical Research in R band to investigate the mass of the old stellar population. Using a metric radius of 12 h -1 kpc, we found that the BCG luminosity depends weakly on overall cluster mass as L BCG vprop M 0.18±0.07 cl, consistent with previous work. We found that 90% of the BCGs are located within 0.035 r 500 of the peak of the X-ray emission, including all of the cool core (CC) clusters. We also found an unexpected correlation between the BCG metric luminosity and the core gas density for non-cool-core (non-CC) clusters, following a power law of ne vprop L 2.7±0.4 BCG (where ne is measured at 0.008 r 500). The correlation is not easily explained by star formation (which is weak in non-CC clusters) or overall cluster mass (which is not correlated with core gas density). The trend persists even when the BCG is not located near the peak of the X-ray emission, so proximity is not necessary. We suggest that, for non-CC clusters, this correlation implies that the same process that sets the central entropy of the cluster gas also determines the central stellar density of the BCG, and that this underlying physical process is likely to be mergers.

  3. Cluster Radioactivity in 127I

    Directory of Open Access Journals (Sweden)

    K. Manimaran

    2013-08-01

    Full Text Available Using the preformation cluster model of Gupta and collaborators we have studied all the possible cluster decay modes of 127 I. The calculated half-lives are compared with recently measured lower limits of cluster decay half-lives (for the clusters like 24Ne, 28Mg, 30Mg, 32Si, 34Si, 48Ca and 49Sc of 127I. Our calculated half-life values lies well above the experimentally measured lower limits and the trend of the values also matches with experimental ones.

  4. Optical properties of cluster plasma

    Energy Technology Data Exchange (ETDEWEB)

    Kishimoto, Yasuaki; Tajima, Toshiki [Japan Atomic Energy Research Inst., Neyagawa, Osaka (Japan). Kansai Research Establishment; Downer, M.C.

    1998-03-01

    It is shown that unlike a gas plasma or an electron plasma in a metal, an ionized clustered material (`cluster plasma`) permits propagation below the plasma cut-off of electromagnetic (EM) waves whose phase velocity is close to but below the speed of light. This results from the excitation of a plasma oscillation mode (and/or polarization mode) through the cluster surface which does not exist in usual gaseous plasma. The existence of this new optical mode, cluster mode, is confirmed via numerical simulation. (author)

  5. Relativistic Binaries in Globular Clusters

    Directory of Open Access Journals (Sweden)

    Benacquista Matthew J.

    2006-02-01

    Full Text Available The galactic population of globular clusters are old, dense star systems, with a typical cluster containing 10^4 - 10^7 stars. As an old population of stars, globular clusters contain many collapsed and degenerate objects. As a dense population of stars, globular clusters are the scene of many interesting close dynamical interactions between stars. These dynamical interactions can alter the evolution of individual stars and can produce tight binary systems containing one or two compact objects. In this review, we discuss the theoretical models of globular cluster evolution and binary evolution, techniques for simulating this evolution which lead to relativistic binaries, and current and possible future observational evidence for this population. Globular cluster evolution will focus on the properties that boost the production of hard binary systems and on the tidal interactions of the galaxy with the cluster, which tend to alter the structure of the globular cluster with time. The interaction of the components of hard binary systems alters the evolution of both bodies and can lead to exotic objects. Direct N-body integrations and Fokker-Planck simulations of the evolution of globular clusters that incorporate tidal interactions and lead to predictions of relativistic binary populations are also discussed. We discuss the current observational evidence for cataclysmic variables, millisecond pulsars, and low-mass X-ray binaries as well as possible future detection of relativistic binaries with gravitational radiation.

  6. Relativistic Binaries in Globular Clusters

    Directory of Open Access Journals (Sweden)

    Benacquista Matthew

    2002-01-01

    Full Text Available The galactic population of globular clusters are old, dense star systems, with a typical cluster containing $10^4 - 10^6$ stars. As an old population of stars, globular clusters contain many collapsed and degenerate objects. As a dense population of stars, globular clusters are the scene of many interesting close dynamical interactions between stars. These dynamical interactions can alter the evolution of individual stars and can produce tight binary systems containing one or two compact objects. In this review, we discuss the theoretical models of globular cluster evolution and binary evolution, techniques for simulating this evolution which lead to relativistic binaries, and current and possible future observational evidence for this population. Globular cluster evolution will focus on the properties that boost the production of hard binary systems and on the tidal interactions of the galaxy with the cluster, which tend to alter the structure of the globular cluster with time. The interaction of the components of hard binary systems alters the evolution of both bodies and can lead to exotic objects. Direct $N$-body integrations and Fokker--Planck simulations of the evolution of globular clusters that incorporate tidal interactions and lead to predictions of relativistic binary populations are also discussed. We discuss the current observational evidence for cataclysmic variables, millisecond pulsars, and low-mass X-ray binaries as well as possible future detection of relativistic binaries with gravitational radiation.

  7. Integrative cluster analysis in bioinformatics

    CERN Document Server

    Abu-Jamous, Basel; Nandi, Asoke K

    2015-01-01

    Clustering techniques are increasingly being put to use in the analysis of high-throughput biological datasets. Novel computational techniques to analyse high throughput data in the form of sequences, gene and protein expressions, pathways, and images are becoming vital for understanding diseases and future drug discovery. This book details the complete pathway of cluster analysis, from the basics of molecular biology to the generation of biological knowledge. The book also presents the latest clustering methods and clustering validation, thereby offering the reader a comprehensive review o

  8. Active matter clusters at interfaces.

    Science.gov (United States)

    Copenhagen, Katherine; Gopinathan, Ajay

    2016-03-01

    Collective and directed motility or swarming is an emergent phenomenon displayed by many self-organized assemblies of active biological matter such as clusters of embryonic cells during tissue development, cancerous cells during tumor formation and metastasis, colonies of bacteria in a biofilm, or even flocks of birds and schools of fish at the macro-scale. Such clusters typically encounter very heterogeneous environments. What happens when a cluster encounters an interface between two different environments has implications for its function and fate. Here we study this problem by using a mathematical model of a cluster that treats it as a single cohesive unit that moves in two dimensions by exerting a force/torque per unit area whose magnitude depends on the nature of the local environment. We find that low speed (overdamped) clusters encountering an interface with a moderate difference in properties can lead to refraction or even total internal reflection of the cluster. For large speeds (underdamped), where inertia dominates, the clusters show more complex behaviors crossing the interface multiple times and deviating from the predictable refraction and reflection for the low velocity clusters. We then present an extreme limit of the model in the absence of rotational damping where clusters can become stuck spiraling along the interface or move in large circular trajectories after leaving the interface. Our results show a wide range of behaviors that occur when collectively moving active biological matter moves across interfaces and these insights can be used to control motion by patterning environments.

  9. Single-cluster dynamics for the random-cluster model

    Science.gov (United States)

    Deng, Youjin; Qian, Xiaofeng; Blöte, Henk W. J.

    2009-09-01

    We formulate a single-cluster Monte Carlo algorithm for the simulation of the random-cluster model. This algorithm is a generalization of the Wolff single-cluster method for the q -state Potts model to noninteger values q>1 . Its results for static quantities are in a satisfactory agreement with those of the existing Swendsen-Wang-Chayes-Machta (SWCM) algorithm, which involves a full-cluster decomposition of random-cluster configurations. We explore the critical dynamics of this algorithm for several two-dimensional Potts and random-cluster models. For integer q , the single-cluster algorithm can be reduced to the Wolff algorithm, for which case we find that the autocorrelation functions decay almost purely exponentially, with dynamic exponents zexp=0.07 (1), 0.521 (7), and 1.007 (9) for q=2 , 3, and 4, respectively. For noninteger q , the dynamical behavior of the single-cluster algorithm appears to be very dissimilar to that of the SWCM algorithm. For large critical systems, the autocorrelation function displays a range of power-law behavior as a function of time. The dynamic exponents are relatively large. We provide an explanation for this peculiar dynamic behavior.

  10. Sleep in cluster headache

    DEFF Research Database (Denmark)

    Barloese, M C J; Jennum, P J; Lund, N T

    2015-01-01

    BACKGROUND AND PURPOSE: Cluster headache (CH) is a primary headache disorder characterized by severe attacks of unilateral pain following a chronobiological pattern. There is a close connection with sleep as most attacks occur during sleep. Hypothalamic involvement and a particular association...... with rapid eye movement (REM) sleep have been suggested. Sleep in a large, well-characterized population of CH patients was investigated. METHODS: Polysomnography (PSG) was performed on two nights in 40 CH patients during active bout and one night in 25 age, sex and body mass index matched controls...... in hospital. Macrostructure and other features of sleep were analyzed and related to phenotype. Clinical headache characterization was obtained by semi-structured interview. RESULTS: Ninety-nine nights of PSG were analyzed. Findings included a reduced percentage of REM sleep (17.3% vs. 23.0%, P = 0...

  11. Astronomy from satellite clusters

    Science.gov (United States)

    Stachnik, R.; Labeyrie, A.

    1984-03-01

    Attention is called to the accumulating evidence that giant space telescopes, comprising a number of separate mirrors on independent satellites, are a realistic prospect for providing research tools of extraordinary power. The ESA-sponsored group and its counterpart in the US have reached remarkably similar conclusions regarding the basic configuration of extremely large synthetic-aperture devices. Both share the basic view that a cluster of spacecraft is preferable to a single monolithic structure. The emphasis of the US group has been on a mission that sweeps across as many sources as possible in the minimum time; it is referred to as SAMSI (Spacecraft Array for Michelson Spatial Interferometry). The European group has placed more emphasis on obtaining two-dimensional images. Their system is referred to as TRIO because, at least initially, it involves three independent systems. Detailed descriptions are given of the two systems.

  12. The Confucian Asian cluster

    Directory of Open Access Journals (Sweden)

    Ionel Sergiu Pirju

    2013-11-01

    Full Text Available The Confucian Asian cluster consists of China, Hong Kong, Japan, Singapore, South Korea, and Taiwan. Confucian tradition countries were defined by achieving a consistent performance in the global economy, they still representing the major competitors in the EU and North American countries. Their progress is defined by a great national management that was able to influence beneficial management systems applied in organizations, these rules characterized by authority; aims to ensure the confidence in business. This article will present the intercultural values characterizing it, the leadership style and also tracing major macroeconomic considerations. The research is synchronic, analysing the contemporary situation of these countries, and the analysis will be interdisciplinary exploratory, identifying specific regional cultural elements.

  13. Analyzing geographic clustered response

    Energy Technology Data Exchange (ETDEWEB)

    Merrill, D.W.; Selvin, S.; Mohr, M.S.

    1991-08-01

    In the study of geographic disease clusters, an alternative to traditional methods based on rates is to analyze case locations on a transformed map in which population density is everywhere equal. Although the analyst's task is thereby simplified, the specification of the density equalizing map projection (DEMP) itself is not simple and continues to be the subject of considerable research. Here a new DEMP algorithm is described, which avoids some of the difficulties of earlier approaches. The new algorithm (a) avoids illegal overlapping of transformed polygons; (b) finds the unique solution that minimizes map distortion; (c) provides constant magnification over each map polygon; (d) defines a continuous transformation over the entire map domain; (e) defines an inverse transformation; (f) can accept optional constraints such as fixed boundaries; and (g) can use commercially supported minimization software. Work is continuing to improve computing efficiency and improve the algorithm. 21 refs., 15 figs., 2 tabs.

  14. Meaningful Clustered Forest: an Automatic and Robust Clustering Algorithm

    CERN Document Server

    Tepper, Mariano; Almansa, Andrés

    2011-01-01

    We propose a new clustering method that can be regarded as a numerical method to compute the proximity gestalt. The method analyzes edge length statistics in the MST of the dataset and provides an a contrario cluster detection criterion. The approach is fully parametric on the chosen distance and can detect arbitrarily shaped clusters. The method is also automatic, in the sense that only a single parameter is left to the user. This parameter has an intuitive interpretation as it controls the expected number of false detections. We show that the iterative application of our method can (1) provide robustness to noise and (2) solve a masking phenomenon in which a highly populated and salient cluster dominates the scene and inhibits the detection of less-populated, but still salient, clusters.

  15. Herd Clustering: A synergistic data clustering approach using collective intelligence

    KAUST Repository

    Wong, Kachun

    2014-10-01

    Traditional data mining methods emphasize on analytical abilities to decipher data, assuming that data are static during a mining process. We challenge this assumption, arguing that we can improve the analysis by vitalizing data. In this paper, this principle is used to develop a new clustering algorithm. Inspired by herd behavior, the clustering method is a synergistic approach using collective intelligence called Herd Clustering (HC). The novel part is laid in its first stage where data instances are represented by moving particles. Particles attract each other locally and form clusters by themselves as shown in the case studies reported. To demonstrate its effectiveness, the performance of HC is compared to other state-of-the art clustering methods on more than thirty datasets using four performance metrics. An application for DNA motif discovery is also conducted. The results support the effectiveness of HC and thus the underlying philosophy. © 2014 Elsevier B.V.

  16. The Nordic Mobile Telecommunication Cluster

    DEFF Research Database (Denmark)

    Jørgensen, Ulrik

    2000-01-01

    A study of the historic role of the Nordic mobile telephone and telecommunications cluster and its background in both coordinated innovation policies and societal developments in Scandinavia.......A study of the historic role of the Nordic mobile telephone and telecommunications cluster and its background in both coordinated innovation policies and societal developments in Scandinavia....

  17. Assembling of hydrogenated aluminum clusters

    Energy Technology Data Exchange (ETDEWEB)

    Duque, F.; Mananes, A. [Dept. de Fisica Moderna, Universidad de Cantabria, Santander (Spain); Molina, L.M.; Lopez, M.J.; Alonso, J.A. [Dept. de Fisica Teorica, Universidad de Valladolid (Spain)

    2001-09-01

    The electronic and atomic structure of Al{sub 13}H has been studied using Density Functional Theory. Al{sub 13}H has closed electronic shells. This makes the cluster very stable and suggests that it could be a candidate to form cluster assembled solids. The interaction between two Al{sub 13}H clusters was analyzed and we found that the two units preserve their identities in the dimer. A cubic-like solid phase assembled from Al{sub 13}H units was then modeled. In that solid the clusters retain much of their identity. Molecular dynamics runs show that the structure of the assembled solid is stable at least up to 150 K. A favorable relative orientation of the clusters with respect to their neighbors is critical for the stability of that solid. (orig.)

  18. The inner Galactic globular clusters

    Directory of Open Access Journals (Sweden)

    Mateo M.

    2013-03-01

    Full Text Available Galactic globular clusters located towards the inner regions of the Milky Way have been historically neglected, mainly due to the difficulties caused by the presence of an elevated extinction by foreground dust, and high field star densities along the lines of sight where most of them lie. To overcome these difficulties we have developed a new method to map the differential extinction suffered by these clusters, which was successfully applied to a sample of moderately-extincted, luminous, extended, inner Galactic globular clusters observed in the optical, for which we have been able to determine more accurate physical parameters. For the most extincted inner Galactic globular clusters, near-infrared wavelengths provide a more suitable window for their study. The VVV survey, which is currently observing the central regions of the Milky Way at these wavelengths, will provide a comprehensive view, from the inner regions out to their tidal radii and beyond, of most of these globular clusters.

  19. An Exact Relaxation of Clustering

    DEFF Research Database (Denmark)

    Mørup, Morten; Hansen, Lars Kai

    2009-01-01

    of clustering problems such as the K-means objective and pairwise clustering as well as graph partition problems, e.g., for community detection in complex networks. In particular we show that a relaxation to the simplex can be given for which the extreme solutions are stable hard assignment solutions and vice......Continuous relaxation of hard assignment clustering problems can lead to better solutions than greedy iterative refinement algorithms. However, the validity of existing relaxations is contingent on problem specific fuzzy parameters that quantify the level of similarity between the original...... versa. Based on the new relaxation we derive the SR-clustering algorithm that has the same complexity as traditional greedy iterative refinement algorithms but leading to significantly better partitions of the data. A Matlab implementation of the SR-clustering algorithm is available for download....

  20. Semantic Based Cluster Content Discovery in Description First Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    MUHAMMAD WASEEM KHAN

    2017-01-01

    Full Text Available In the field of data analytics grouping of like documents in textual data is a serious problem. A lot of work has been done in this field and many algorithms have purposed. One of them is a category of algorithms which firstly group the documents on the basis of similarity and then assign the meaningful labels to those groups. Description first clustering algorithm belong to the category in which the meaningful description is deduced first and then relevant documents are assigned to that description. LINGO (Label Induction Grouping Algorithm is the algorithm of description first clustering category which is used for the automatic grouping of documents obtained from search results. It uses LSI (Latent Semantic Indexing; an IR (Information Retrieval technique for induction of meaningful labels for clusters and VSM (Vector Space Model for cluster content discovery. In this paper we present the LINGO while it is using LSI during cluster label induction and cluster content discovery phase. Finally, we compare results obtained from the said algorithm while it uses VSM and Latent semantic analysis during cluster content discovery phase.

  1. Cluster-lensing: A Python Package for Galaxy Clusters & Miscentering

    CERN Document Server

    Ford, Jes

    2016-01-01

    We describe a new open source package for calculating properties of galaxy clusters, including NFW halo profiles with and without the effects of cluster miscentering. This pure-Python package, cluster-lensing, provides well-documented and easy-to-use classes and functions for calculating cluster scaling relations, including mass-richness and mass-concentration relations from the literature, as well as the surface mass density $\\Sigma(R)$ and differential surface mass density $\\Delta\\Sigma(R)$ profiles, probed by weak lensing magnification and shear. Galaxy cluster miscentering is especially a concern for stacked weak lensing shear studies of galaxy clusters, where offsets between the assumed and the true underlying matter distribution can lead to a significant bias in the mass estimates if not accounted for. This software has been developed and released in a public GitHub repository, and is licensed under the permissive MIT license. The cluster-lensing package is archived on Zenodo (Ford 2016). Full documenta...

  2. Tidal stripping of globular clusters in a simulated galaxy cluster

    CERN Document Server

    Ramos, Felipe; Muriel, Hernán; Abadi, Mario

    2015-01-01

    Using a cosmological N-body numerical simulation of the formation of a galaxy cluster- sized halo, we analyze the temporal evolution of its globular cluster population. We follow the dynamical evolution of 38 galactic dark matter halos orbiting in a galaxy cluster that at redshift z=0 has a virial mass of 1.71 * 10 ^14 Msol h^-1. In order to mimic both "blue" and "red" populations of globular clusters, for each galactic halo we select two different sets of particles at high redshift (z ~ 1), constrained by the condition that, at redshift z=0, their average radial density profiles are similar to the observed profiles. As expected, the general galaxy cluster tidal field removes a significant fraction of the globular cluster populations to feed the intracluster population. On average, halos lost approximately 16% and 29% of their initial red and blue globular cluster populations, respectively. Our results suggest that these fractions strongly depend on the orbital trajectory of the galactic halo, specifically on...

  3. Cosmology with Clusters of Galaxies

    Science.gov (United States)

    Borgani, Stefano

    I reviewed in my talk recent results on the cosmological constraints that can be obtained by following the evolution of the population of galaxy clusters. Using extended samples of X-ray selected clusters, I have shown how they can be used to trace this evolution out to redshift z ~ 1. This evolution can be compared to model predictions and, therefore, to constrain cosmological parameters, such as the density parameter Omega_m and the shape and amplitude of the power spectrum of density perturbations. I have emphasized that the robustness of such constraints is quite sensitive to the relation between cluster collapsed mass and X-ray luminosity and temperature. This demonstrates that our ability to place significant constraints on cosmology using clusters of galaxies relies on our capability to understand the physical processes, which determine the properties of the intra-cluster medium (ICM). In this context, I have discussed how numerical simulations of cluster formation in cosmological context can play an important role in uderstanding the ICM physics. I have presented results from a very large cosmological simulation, which also includes the hydrodynamical description of the cosmic baryons, the processes of star formation and feedback from the stellar populations. The results from this simulation represent a unique baseline to describe the processes of formation and evolution of clusters of galaxies.

  4. THE EXTENDED VIRGO CLUSTER CATALOG

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Suk; Rey, Soo-Chang; Lee, Youngdae; Chung, Jiwon; Pak, Mina; Yi, Wonhyeong; Lee, Woong [Department of Astronomy and Space Science, Chungnam National University, 99 Daehak-ro, Daejeon 305-764 (Korea, Republic of); Jerjen, Helmut [Research School of Astronomy and Astrophysics, The Australian National University, Cotter Road, Weston, ACT 2611 (Australia); Lisker, Thorsten [Astronomisches Rechen-Institut, Zentrum für Astronomie der Universität Heidelberg (ZAH), Mönchhofstraße 12-14, D-69120 Heidelberg (Germany); Sung, Eon-Chang [Korea Astronomy and Space Science institute, 776 Daedeokdae-ro, Daejeon 305-348 (Korea, Republic of)

    2015-01-01

    We present a new catalog of galaxies in the wider region of the Virgo cluster, based on the Sloan Digital Sky Survey (SDSS) Data Release 7. The Extended Virgo Cluster Catalog (EVCC) covers an area of 725 deg{sup 2} or 60.1 Mpc{sup 2}. It is 5.2 times larger than the footprint of the classical Virgo Cluster Catalog (VCC) and reaches out to 3.5 times the virial radius of the Virgo cluster. We selected 1324 spectroscopically targeted galaxies with radial velocities less than 3000 km s{sup –1}. In addition, 265 galaxies that have been overlooked in the SDSS spectroscopic survey but have available redshifts in the NASA Extragalactic Database are also included. Our selection process secured a total of 1589 galaxies, 676 of which are not included in the VCC. The certain and possible cluster members are defined by means of redshift comparison with a cluster infall model. We employed two independent and complementary galaxy classification schemes: the traditional morphological classification based on the visual inspection of optical images and a characterization of galaxies from their spectroscopic features. SDSS u, g, r, i, and z passband photometry of all EVCC galaxies was performed using Source Extractor. We compare the EVCC galaxies with the VCC in terms of morphology, spatial distribution, and luminosity function. The EVCC defines a comprehensive galaxy sample covering a wider range in galaxy density that is significantly different from the inner region of the Virgo cluster. It will be the foundation for forthcoming galaxy evolution studies in the extended Virgo cluster region, complementing ongoing and planned Virgo cluster surveys at various wavelengths.

  5. Herschel photometry of brightest cluster galaxies in cooling flow clusters

    CERN Document Server

    Edge, A C; Mittal, R; Allen, S W; Baum, S A; Boehringer, H; Bregman, J N; Bremer, M N; Combes, F; Crawford, C S; Donahue, M; Egami, E; Fabian, A C; Hamer, S L; Hatch, N A; Jaffe, W; Johnstone, R M; McNamara, B R; O'Dea, C P; Popesso, P; Quillen, A C; Salome, P; Sarazin, C L; Voit, G M; Wilman, R J; Wise, M W

    2010-01-01

    The dust destruction timescales in the cores of clusters of galaxies are relatively short given their high central gas densities. However, substantial mid-infrared and sub-mm emission has been detected in many brightest cluster galaxies. In this letter we present Herschel PACS and SPIRE photometry of the brightest cluster galaxy in three strong cooling flow clusters, A1068, A2597 and Zw3146. This photometry indicates that a substantial mass of cold dust is present (>3 x 10^7 Mo) at temperatures significantly lower (20-28K) than previously thought based on limited MIR and/or sub-mm results. The mass and temperature of the dust appear to match those of the cold gas traced by CO with a gas-to-dust ratio of 80-120.

  6. FunGeneClusterS

    DEFF Research Database (Denmark)

    Vesth, Tammi Camilla; Brandl, Julian; Andersen, Mikael Rørdam

    2016-01-01

    and industrial biotechnology applications. We have previously published a method for accurate prediction of clusters from genome and transcriptome data, which could also suggest cross-chemistry, however, this method was limited both in the number of parameters which could be adjusted as well as in user......Secondary metabolites of fungi are receiving an increasing amount of interest due to their prolific bioactivities and the fact that fungal biosynthesis of secondary metabolites often occurs from co-regulated and co-located gene clusters. This makes the gene clusters attractive for synthetic biology...

  7. Cluster de ventiladores em Catanduva.

    Directory of Open Access Journals (Sweden)

    Luciana M. Onusic

    2005-04-01

    Full Text Available Este trabalho apresenta os resultados de um levantamento feito na cidade de Catanduva sobre a indústria de ventiladores nela instalada. É, inicialmente, apresentado o conceito de cluster, para, em seguida, serem apresentadas as características do setor de ventiladores de Catanduva, fazendo uma comparação desse setor com o conceito de cluster. Diversos aspectos mostram o interesse em considerar o setor como um cluster e são feitas sugestões para seu aprimoramento.

  8. Dynamical Processes in Globular Clusters

    CERN Document Server

    McMillan, Stephen L W

    2014-01-01

    Globular clusters are among the most congested stellar systems in the Universe. Internal dynamical evolution drives them toward states of high central density, while simultaneously concentrating the most massive stars and binary systems in their cores. As a result, these clusters are expected to be sites of frequent close encounters and physical collisions between stars and binaries, making them efficient factories for the production of interesting and observable astrophysical exotica. I describe some elements of the competition among stellar dynamics, stellar evolution, and other processes that control globular cluster dynamics, with particular emphasis on pathways that may lead to the formation of blue stragglers.

  9. REPETITIVE CLUSTER-TILTED ALGEBRAS

    Institute of Scientific and Technical Information of China (English)

    Zhang Shunhua; Zhang Yuehui

    2012-01-01

    Let H be a finite-dimensional hereditary algebra over an algebraically closed field k and CFm be the repetitive cluster category of H with m ≥ 1.We investigate the properties of cluster tilting objects in CFm and the structure of repetitive clustertilted algebras.Moreover,we generalize Theorem 4.2 in [12](Buan A,Marsh R,Reiten I.Cluster-tilted algebra,Trans.Amer.Math.Soc.,359(1)(2007),323-332.) to the situation of CFm,and prove that the tilting graph KCFm of CFm is connected.

  10. New Territory SZ Cluster Surveys

    CERN Document Server

    Bartlett, J G; Barbosa, D

    1998-01-01

    The potential of the Sunyaev-Zel'dovich (SZ) effect for cluster studies has long been appreciated, although not yet fully exploited. Recent technological advances and improvements in observing strategies have changed this, to the point where it is now possible to speak of this subject at a meeting devoted to may be called {\\em pointed surveys}, dedicated to pre-selected clusters, from the former type already have significant numbers of clusters with very good signal-to-noise images; surveys of the second type are currently possible, but as yet not undertaken. The discussion will focus on the kind of science that can be done in this ``new territory''.

  11. Light cluster production at NICA

    Energy Technology Data Exchange (ETDEWEB)

    Bastian, N.U. [University of Wroclaw, Wroclaw (Poland); Batyuk, P.; Rogachevsky, O. [Joint Institute for Nuclear Research, Dubna (Russian Federation); Blaschke, D. [University of Wroclaw, Wroclaw (Poland); Joint Institute for Nuclear Research, Dubna (Russian Federation); National Research Nuclear University (MEPhI), Moscow (Russian Federation); Danielewicz, P. [Michigan State University, East Lansing, MI (United States); Ivanov, Yu.B. [National Research Nuclear University (MEPhI), Moscow (Russian Federation); National Research Centre ' ' Kurchatov Institute' ' , Moscow (Russian Federation); Karpenko, Iu. [Bogolyubov Institute for Theoretical Physics, Kiev (Ukraine); INFN, Sezione di Firenze, Sesto Fiorentino (Italy); Roepke, G. [National Research Nuclear University (MEPhI), Moscow (Russian Federation); University of Rostock, Rostock (Germany); Wolter, H.H. [Universitaet Muenchen, Garching (Germany)

    2016-08-15

    Light cluster production at the NICA accelerator complex offers unique possibilities to use these states as ''rare probes'' of in-medium characteristics such as phase space occupation and early flow. In order to explain this statement, in this contribution theoretical considerations from the nuclear statistical equilibrium model and from a quantum statistical model of cluster production are supplemented with a discussion of a transport model for light cluster formation and with results from hydrodynamic simulations combined with the coalescence model. (orig.)

  12. AMOEBA clustering revisited. [cluster analysis, classification, and image display program

    Science.gov (United States)

    Bryant, Jack

    1990-01-01

    A description of the clustering, classification, and image display program AMOEBA is presented. Using a difficult high resolution aircraft-acquired MSS image, the steps the program takes in forming clusters are traced. A number of new features are described here for the first time. Usage of the program is discussed. The theoretical foundation (the underlying mathematical model) is briefly presented. The program can handle images of any size and dimensionality.

  13. PHAT Stellar Cluster Survey. II. Andromeda Project Cluster Catalog

    CERN Document Server

    Johnson, L Clifton; Dalcanton, Julianne J; Wallace, Matthew L; Simpson, Robert J; Lintott, Chris J; Kapadia, Amit; Skillman, Evan D; Caldwell, Nelson; Fouesneau, Morgan; Weisz, Daniel R; Williams, Benjamin F; Beerman, Lori C; Gouliermis, Dimitrios A; Sarajedini, Ata

    2015-01-01

    We construct a stellar cluster catalog for the Panchromatic Hubble Andromeda Treasury (PHAT) survey using image classifications collected from the Andromeda Project citizen science website. We identify 2,753 clusters and 2,270 background galaxies within ~0.5 deg$^2$ of PHAT imaging searched, or ~400 kpc$^2$ in deprojected area at the distance of the Andromeda galaxy (M31). These identifications result from 1.82 million classifications of ~20,000 individual images (totaling ~7 gigapixels) by tens of thousands of volunteers. We show that our crowd-sourced approach, which collects >80 classifications per image, provides a robust, repeatable method of cluster identification. The high spatial resolution Hubble Space Telescope images resolve individual stars in each cluster and are instrumental in the factor of ~6 increase in the number of clusters known within the survey footprint. We measure integrated photometry in six filter passbands, ranging from the near-UV to the near-IR. PHAT clusters span a range of ~8 ma...

  14. A Clustering Graph Generator

    Energy Technology Data Exchange (ETDEWEB)

    Winlaw, Manda [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); De Sterck, Hans [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Sanders, Geoffrey [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2015-10-26

    In very simple terms a network can be de ned as a collection of points joined together by lines. Thus, networks can be used to represent connections between entities in a wide variety of elds including engi- neering, science, medicine, and sociology. Many large real-world networks share a surprising number of properties, leading to a strong interest in model development research and techniques for building synthetic networks have been developed, that capture these similarities and replicate real-world graphs. Modeling these real-world networks serves two purposes. First, building models that mimic the patterns and prop- erties of real networks helps to understand the implications of these patterns and helps determine which patterns are important. If we develop a generative process to synthesize real networks we can also examine which growth processes are plausible and which are not. Secondly, high-quality, large-scale network data is often not available, because of economic, legal, technological, or other obstacles [7]. Thus, there are many instances where the systems of interest cannot be represented by a single exemplar network. As one example, consider the eld of cybersecurity, where systems require testing across diverse threat scenarios and validation across diverse network structures. In these cases, where there is no single exemplar network, the systems must instead be modeled as a collection of networks in which the variation among them may be just as important as their common features. By developing processes to build synthetic models, so-called graph generators, we can build synthetic networks that capture both the essential features of a system and realistic variability. Then we can use such synthetic graphs to perform tasks such as simulations, analysis, and decision making. We can also use synthetic graphs to performance test graph analysis algorithms, including clustering algorithms and anomaly detection algorithms.

  15. Evolution of homeobox gene clusters in animals: the Giga-cluster and primary versus secondary clustering.

    Directory of Open Access Journals (Sweden)

    David Ellard Keith Ferrier

    2016-04-01

    Full Text Available The Hox gene cluster has been a major focus in evolutionary developmental biology. This is because of its key role in patterning animal development and widespread examples of changes in Hox genes being linked to the evolution of animal body plans and morphologies. Also, the distinctive organisation of the Hox genes into genomic clusters in which the order of the genes along the chromosome corresponds to the order of their activity along the embryo, or during a developmental process, has been a further source of great interest. This is known as Colinearity, and it provides a clear link between genome organisation and the regulation of genes during development, with distinctive changes marking evolutionary transitions. The Hox genes are not alone, however. The homeobox genes are a large super-class, of which the Hox genes are only a small subset, and an ever-increasing number of further gene clusters besides the Hox are being discovered. This is of great interest because of the potential for such gene clusters to help understand major evolutionary transitions, both in terms of changes to development and morphology as well as evolution of genome organisation. However, there is uncertainty in our understanding of homeobox gene cluster evolution at present. This relates to our still rudimentary understanding of the dynamics of genome rearrangements and evolution over the evolutionary timescales being considered when we compare lineages from across the animal kingdom. A major goal is to deduce whether particular instances of clustering are primary (conserved from ancient ancestral clusters or secondary (reassortment of genes into clusters in lineage-specific fashion. The following summary of the various instances of homeobox gene clusters in animals, and the hypotheses about their evolution, provides a framework for the future resolution of this uncertainty.

  16. IRAC imaging of GOGREEN clusters

    Science.gov (United States)

    McGee, Sean; Balogh, Michael; Cooper, Michael; Gilbank, David; Lidman, Chris; Muzzin, Adam; Old, Lyndsay; Rudnick, Greg; Wilson, Gillian; Yee, Howard

    2016-08-01

    We propose deep IRAC imaging of three galaxy clusters drawn from the GOGREEN survey of 21 galaxy clusters in the redshift range 1 Magellan and CFHT imaging and by an ongoing Gemini Large Programme, with which we are obtaining deep spectroscopy of > 1000 member and > 600 field galaxies. With these data and our own lower-redshift descendant data, we will measure 1) the evolution of the quenched fraction and its dependence on distance from the cluster center and 2) the relation between stellar and halo mass and its evolution. This will provide unique constraints to our in-house theoretical models at an epoch where there are currently almost none available. The imaging that we propose will ensure all 21 GOGREEN clusters have deep IRAC data, ensuring the lasting legacy of this benchmark sample.

  17. Kernel Generalized Noise Clustering Algorithm

    Institute of Scientific and Technical Information of China (English)

    WU Xiao-hong; ZHOU Jian-jiang

    2007-01-01

    To deal with the nonlinear separable problem, the generalized noise clustering (GNC) algorithm is extended to a kernel generalized noise clustering (KGNC) model. Different from the fuzzy c-means (FCM) model and the GNC model which are based on Euclidean distance, the presented model is based on kernel-induced distance by using kernel method. By kernel method the input data are nonlinearly and implicitly mapped into a high-dimensional feature space, where the nonlinear pattern appears linear and the GNC algorithm is performed. It is unnecessary to calculate in high-dimensional feature space because the kernel function can do itjust in input space. The effectiveness of the proposed algorithm is verified by experiments on three data sets. It is concluded that the KGNC algorithm has better clustering accuracy than FCM and GNC in clustering data sets containing noisy data.

  18. The Cluster as Market Organization

    DEFF Research Database (Denmark)

    Maskell, Peter; Lorenzen, Mark

    2003-01-01

    The many competing schools of thought concerning themselves with industrial clusters have atleast one thing in common: they all agree that clusters are real life phenomena characterized bythe co-localization of separate economic entities, which are in some sense related, but not joinedtogether...... by any common ownership or management. So hierarchies they are certainly not.Yet, it is usually taken for granted that clusters, almost regardless of how they are defined, allexpatriate the 'swollen middle' of various hybrid 'forms of long-term contracting, reciprocaltrading, regulation, franchising...... organization or market form. The cluster is one suchspecific market organization that is structured along territorial lines because this enables thebuilding of a set of institutions that are helpful in conducting certain kinds of economicactivities....

  19. Cluster headache: conventional pharmacological management.

    Science.gov (United States)

    Becker, Werner J

    2013-01-01

    Cluster headache pain is very intense, usually increases in intensity very rapidly from onset, and attacks are often frequent. These clinical features result in significant therapeutic challenges. The most effective pharmacological treatment options for acute cluster attack include subcutaneous sumatriptan, 100% oxygen, and intranasal zolmitriptan. Subcutaneous or intramuscular dihydroergotamine and intranasal sumatriptan are additional options. Transitional therapy is applicable mainly for patients with high-frequency (>2 attacks per day) episodic cluster headache, and options include short courses of high-dose oral corticosteroids, dihydroergotamine, and occipital nerve blocks with local anesthetic and steroids. Prophylactic therapy is important both for episodic and chronic cluster headache, and the main options are verapamil and lithium. Verapamil is drug of first choice but may cause cardiac arrhythmias, and periodic electrocardiograms (EKGs) during dose escalation are important. Many other drugs are also in current use, but there is an insufficient evidence base to recommend them.

  20. Hierarchical clustering for graph visualization

    CERN Document Server

    Clémençon, Stéphan; Rossi, Fabrice; Tran, Viet Chi

    2012-01-01

    This paper describes a graph visualization methodology based on hierarchical maximal modularity clustering, with interactive and significant coarsening and refining possibilities. An application of this method to HIV epidemic analysis in Cuba is outlined.

  1. Gas Dynamics in Galaxy Clusters

    Science.gov (United States)

    McCourt, Michael Kingsley, Jr.

    Galaxy clusters are the most massive structures in the universe and, in the hierarchical pattern of cosmological structure formation, the largest objects in the universe form last. Galaxy clusters are thus interesting objects for a number of reasons. Three examples relevant to this thesis are: 1. Constraining the properties of dark energy: Due to the hierarchical nature of structure formation, the largest objects in the universe form last. The cluster mass function is thus sensitive to the entire expansion history of the universe and can be used to constrain the properties of dark energy. This constraint complements others derived from the CMB or from Type Ia supernovae and provides an important, independent confirmation of such methods. In particular, clusters provide detailed information about the equation of state parameter w because they sample a large redshift range z ˜ 0 - 1. 2. Probing galaxy formation: Clusters contain the most massive galaxies in the uni- verse, and the most massive black holes; because clusters form so late, we can still witness the assembly of these objects in the nearby universe. Clusters thus provide a more detailed view of galaxy formation than is possible in studies of lower-mass ob- jects. An important example comes from x-ray studies of clusters, which unexpectedly found that star formation in massive galaxies in clusters is closely correlated with the properties of the hot, virialized gas in their halos. This correlation persists despite the enormous separation in temperature, in dynamical time-scales, and in length-scales between the virialized gas in the halo and the star-forming regions in the galaxy. This remains a challenge to interpret theoretically. 3. Developing our knowledge of dilute plasmas: The masses and sizes of galaxy clusters imply that the plasma which permeates them is both very hot (˜ 108 K) and very dilute (˜ 10 -2 cm-3). This plasma is collisional enough to be considered a fluid, but collisionless enough to

  2. Chemical evolution of star clusters.

    Science.gov (United States)

    van Loon, Jacco Th

    2010-02-28

    I discuss the chemical evolution of star clusters, with emphasis on old Galactic globular clusters (GCs), in relation to their formation histories. GCs are clearly formed in a complex fashion, under markedly different conditions from any younger clusters presently known. Those special conditions must be linked to the early formation epoch of the Galaxy and must not have occurred since. While a link to the formation of GCs in dwarf galaxies has been suggested, present-day dwarf galaxies are not representative of the gravitational potential wells within which the GCs formed. Instead, a formation deep within the proto-Galaxy or within dark-matter mini-haloes might be favoured. Not all GCs may have formed and evolved similarly. In particular, we may need to distinguish Galactic Halo from Galactic Bulge clusters.

  3. Star Cluster Formation and Feedback

    CERN Document Server

    Krumholz, Mark R; Arce, Hector G; Dale, James E; Gutermuth, Robert; Klein, Richard I; Li, Zhi-Yun; Nakamura, Fumitaka; Zhang, Qizhou

    2014-01-01

    Stars do not generally form in isolation. Instead, they form in clusters, and in these clustered environments newborn stars can have profound effects on one another and on their parent gas clouds. Feedback from clustered stars is almost certainly responsible for a number of otherwise puzzling facts about star formation: that it is an inefficient process that proceeds slowly when averaged over galactic scales; that most stars disperse from their birth sites and dissolve into the galactic field over timescales $\\ll 1$ Gyr; and that newborn stars follow an initial mass function (IMF) with a distinct peak in the range $0.1 - 1$ $M_\\odot$, rather than an IMF dominated by brown dwarfs. In this review we summarize current observational constraints and theoretical models for the complex interplay between clustered star formation and feedback.

  4. Investigating Exoplanets Within Stellar Clusters

    Science.gov (United States)

    Glaser, Joseph Paul; Reisinger, Tyler; Thornton, Jonathan; McMillan, Stephen L. W.

    2017-01-01

    Recent surveys exploring nearby open clusters have yielded noticeable differences in the planetary population from that seen in the Field. This is surprising, as it is widely accepted that a majority of stars form within clustered environments before dispersing throughout the galaxy. Though dynamical arguments have been used to explain this discrepancy in the past, previous surveys' observational statistics and detection biases can also be used to argue that the open cluster planet population is indistinguishable from the Field.Our group aims to explore the role of stellar close encounters and interplanetary interactions in producing the observed exoplanet populations for both open cluster stars and Field stars. We employ a variety of different computational techniques to investigate these effects, ranging from traditional Monte Carlo scattering experiments to multi-scale n-body simulations. We are interested in: the effects of stellar binaries; Hot Jupiter migrations; long-period ice giants; and the habitability history of terrestrial planets.

  5. Intuitionistic fuzzy hierarchical clustering algorithms

    Institute of Scientific and Technical Information of China (English)

    Xu Zeshui

    2009-01-01

    Intuitionistic fuzzy set (IFS) is a set of 2-tuple arguments, each of which is characterized by a mem-bership degree and a nonmembership degree. The generalized form of IFS is interval-valued intuitionistic fuzzy set (IVIFS), whose components are intervals rather than exact numbers. IFSs and IVIFSs have been found to be very useful to describe vagueness and uncertainty. However, it seems that little attention has been focused on the clus-tering analysis of IFSs and IVIFSs. An intuitionistic fuzzy hierarchical algorithm is introduced for clustering IFSs, which is based on the traditional hierarchical clustering procedure, the intuitionistic fuzzy aggregation operator, and the basic distance measures between IFSs: the Hamming distance, normalized Hamming, weighted Hamming, the Euclidean distance, the normalized Euclidean distance, and the weighted Euclidean distance. Subsequently, the algorithm is extended for clustering IVIFSs. Finally the algorithm and its extended form are applied to the classifications of building materials and enterprises respectively.

  6. Radio Emission from Globular Clusters

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Radio emission of globular clusters is studied by analyzing the VLA radio survey data of the NVSS and FIRST. We find that 13 clusters have radio sources within their half-mass radii of clusters. Sources detected previously in NGC 7078and NGC 6440 are identified. Pulsars in NGC 6121, NGC 6440 and NGC 7078cannot be detected because of the insufficient survey sensitivity and resolution.There may be a pulsar in the core of Terzan 1. The nature of the extended radio source near the core of NGC 6440 remains unclear. In the core of a globular cluster,there may be many neutron stars or an intermediate mass black hole, but this cannot be clarified with the current radio observations.

  7. Clusters and the Cosmic Web

    CERN Document Server

    Van de Weygaert, R

    2006-01-01

    We discuss the intimate relationship between the filamentary features and the rare dense compact cluster nodes in this network, via the large scale tidal field going along with them, following the cosmic web theory developed Bond et al. The Megaparsec scale tidal shear pattern is responsible for the contraction of matter into filaments, and its link with the cluster locations can be understood through the implied quadrupolar mass distribution in which the clusters are to be found at the sites of the overdense patches. We present a new technique for tracing the cosmic web, identifying planar walls, elongated filaments and cluster nodes in the galaxy distribution. This will allow the practical exploitation of the concept of the cosmic web towards identifying and tracing the locations of the gaseous WHIM. These methods, the Delaunay Tessellation Field Estimator (DTFE) and the Morphology Multiscale Filter (MMF) find their basis in computational geometry and visualization.

  8. Infrared spectroscopy of ionic clusters

    Energy Technology Data Exchange (ETDEWEB)

    Price, J.M. (California Univ., Berkeley, CA (USA). Dept. of Chemistry Lawrence Berkeley Lab., CA (USA))

    1990-11-01

    This thesis describes new experiments wherein the infrared vibrational predissociation spectra of a number of mass-selected ionic cluster systems have been obtained and analyzed in the 2600 to 4000 cm{sup {minus}1} region. The species studied include: the hydrated hydronium ions, H{sub 3}O{sup +} (H{sub 2}O){sub 3 {minus}10}, ammoniated ammonium ions, NH{sub 4}{sup +}(NH{sub 3}){sub 1 {minus}10} and cluster ions involving both water and ammonia around an ammonium ion core, (mixed clusters) NH{sub 4}{sup +}(NH{sub 3}){sub n}(H{sub 2}O){sub m} (n+m=4). In each case, the spectra reveal well resolved structures that can be assigned to transitions arising from the vibrational motions of both the ion core of the clusters and the surrounding neutral solvent molecules. 154 refs., 19 figs., 8 tabs.

  9. Symplectic maps from cluster algebras

    CERN Document Server

    Fordy, Allan

    2011-01-01

    We consider nonlinear recurrences generated from the iteration of maps that arise from cluster algebras. More precisely, starting from a skew-symmetric integer matrix, or its corresponding %associated quiver, one can define a set of mutation operations, as well as a set of associated cluster mutations that are applied to a set of affine coordinates (the cluster variables). Fordy and Marsh recently provided a complete classification of all such quivers that have a certain periodicity property under sequences of mutations. This periodicity implies that a suitable sequence of cluster mutations is precisely equivalent to iteration of a nonlinear recurrence relation. Here we explain briefly how to introduce a % symplectic structure in this setting, which is preserved by a corresponding birational map (possibly on a space of lower dimension). We give examples of both integrable and non-integrable maps that arise from this construction. We use algebraic entropy as an approach to classifying integrable cases. The deg...

  10. Cluster randomization and political philosophy.

    Science.gov (United States)

    Chwang, Eric

    2012-11-01

    In this paper, I will argue that, while the ethical issues raised by cluster randomization can be challenging, they are not new. My thesis divides neatly into two parts. In the first, easier part I argue that many of the ethical challenges posed by cluster randomized human subjects research are clearly present in other types of human subjects research, and so are not novel. In the second, more difficult part I discuss the thorniest ethical challenge for cluster randomized research--cases where consent is genuinely impractical to obtain. I argue that once again these cases require no new analytic insight; instead, we should look to political philosophy for guidance. In other words, the most serious ethical problem that arises in cluster randomized research also arises in political philosophy.

  11. SACS: Spitzer Archival Cluster Survey

    Science.gov (United States)

    Stern, Daniel

    Emerging from the cosmic web, galaxy clusters are the most massive gravitationally bound structures in the universe. Thought to have begun their assembly at z > 2, clusters provide insights into the growth of large-scale structure as well as the physics that drives galaxy evolution. Understanding how and when the most massive galaxies assemble their stellar mass, stop forming stars, and acquire their observed morphologies in these environments remain outstanding questions. The redshift range 1.3 galaxies start to become the dominant population in cluster cores, and star formation in spiral galaxies is being quenched. Until recently, however, this redshift range was essentially unreachable with available instrumentation, with clusters at these redshifts exceedingly challenging to identify from either ground-based optical/nearinfrared imaging or from X-ray surveys. Mid-infrared (MIR) imaging with the IRAC camera on board of the Spitzer Space Telescope has changed the landscape. High-redshift clusters are easily identified in the MIR due to a combination of the unique colors of distant galaxies and a negative k-correction in the 3-5 μm range which makes such galaxies bright. Even 90-sec observations with Spitzer/IRAC, a depth which essentially all extragalactic observations in the archive achieve, is sufficient to robustly detect overdensities of L* galaxies out to z~2. Here we request funding to embark on a ambitious scientific program, the “SACS: Spitzer Archival Cluster Survey”, a comprehensive search for the most distant galaxy clusters in all Spitzer/IRAC extragalactic pointings available in the archive. With the SACS we aim to discover ~2000 of 1.3 star formation and AGN activity out to z~2, and to study the effect of star-forming galaxies and AGNs on cosmological results from ongoing Sunyaev-Zel'dovich (SZ) and X-ray cluster surveys. The identified clusters will be valuable for both astrophysics and cosmology. In terms of astrophysics, the redshift probed

  12. Polarizability effect in metallic clusters

    Indian Academy of Sciences (India)

    Ş Şentürk; K Harigaya; O Özsoy

    2006-03-01

    Langevin approach implemented in the inelastic cross-sections measured for the low-energy electrons colliding with metallic clusters points out that statical form of the polarizability dominate at energies less than 1.25 eV. The dynamical form comes into play at energies around 1.3 eV. The form of the polarizabilities indicates that polarizability of the metallic clusters is energy-dependent.

  13. COMPETITIVENESS TEXTILE CLUSTER PERU MEXICO

    OpenAIRE

    Gutiérrez Huby, Ana María; Facultad de Ciencias Contables, Universidad Nacional Mayor de San Marcos; Amador Murguía, María Eugenia; Universidad de Guadalajara

    2014-01-01

    This article is a summary of the research study entitled "A comparative study in Peru- Mexico textile cluster in determining competitive strategies" that was developed in 2010 by the author in collaboration with a team of researchers at the University of Guadalajara. This article basically presents the results in comparative terms of the competitive situation of the textile cluster, Peru and Mexico, "Gamarra" and "Zapotlanejo" respectively representing the textile industry in their countries,...

  14. Magic Numbers of Silicon Clusters

    OpenAIRE

    Pan, Jun; Ramakrishna, Mushti V.

    1994-01-01

    A structural model for intermediate sized silicon clusters is proposed that is able to generate unique structures without any dangling bonds. This structural model consists of bulk-like core of five atoms surrounded by fullerene-like surface. Reconstruction of the ideal fullerene geometry results in the formation of crown atoms surrounded by $\\pi$-bonded dimer pairs. This model yields unique structures for \\Si{33}, \\Si{39}, and \\Si{45} clusters without any dangling bonds and hence explains wh...

  15. Spectral Clustering with Imbalanced Data

    OpenAIRE

    Qian, Jing; Saligrama, Venkatesh

    2013-01-01

    Spectral clustering is sensitive to how graphs are constructed from data particularly when proximal and imbalanced clusters are present. We show that Ratio-Cut (RCut) or normalized cut (NCut) objectives are not tailored to imbalanced data since they tend to emphasize cut sizes over cut values. We propose a graph partitioning problem that seeks minimum cut partitions under minimum size constraints on partitions to deal with imbalanced data. Our approach parameterizes a family of graphs, by ada...

  16. IntroductionThe Cluster mission

    Directory of Open Access Journals (Sweden)

    M. Fehringer

    Full Text Available The Cluster mission, ESA’s first cornerstone project, together with the SOHO mission, dating back to the first proposals in 1982, was finally launched in the summer of 2000. On 16 July and 9 August, respectively, two Russian Soyuz rockets blasted off from the Russian cosmodrome in Baikonour to deliver two Cluster spacecraft, each into their proper orbit. By the end of August 2000, the four Cluster satellites had reached their final tetrahedral constellation. The commissioning of 44 instruments, both individually and as an ensemble of complementary tools, was completed five months later to ensure the optimal use of their combined observational potential. On 1 February 2001, the mission was declared operational. The main goal of the Cluster mission is to study the small-scale plasma structures in three dimensions in key plasma regions, such as the solar wind, bow shock, magnetopause, polar cusps, magnetotail and the auroral zones. With its unique capabilities of three-dimensional spatial resolution, Cluster plays a major role in the International Solar Terrestrial Program (ISTP, where Cluster and the Solar and Heliospheric Observatory (SOHO are the European contributions. Cluster’s payload consists of state-of-the-art plasma instrumentation to measure electric and magnetic fields from the quasi-static up to high frequencies, and electron and ion distribution functions from energies of nearly 0 eV to a few MeV. The science operations are coordinated by the Joint Science Operations Centre (JSOC, at the Rutherford Appleton Laboratory (UK, and implemented by the European Space Operations Centre (ESOC, in Darmstadt, Germany. A network of eight national data centres has been set up for raw data processing, for the production of physical parameters, and their distribution to end users all over the world. The latest information on the Cluster mission can be found at http://sci.esa.int/cluster/.

  17. Open clusters and the galactic disk

    CERN Document Server

    Roeser, Siegfried; Piskunov, Anatoly E; Schilbach, Elena; Scholz, Ralf-Dieter; Zinnecker, Hans

    2010-01-01

    It is textbook knowledge that open clusters are conspicuous members of the thin disk of our Galaxy, but their role as contributors to the stellar population of the disk was regarded as minor. Starting from a homogenous stellar sky survey, the ASCC-2.5, we revisited the population of open clusters in the solar neighbourhood from scratch. In the course of this enterprise we detected 130 formerly unknown open clusters, constructed volume- and magnitude-limited samples of clusters, re-determined distances, motions, sizes, ages, luminosities and masses of 650 open clusters. We derived the present-day luminosity and mass functions of open clusters (not the stellar mass function in open clusters), the cluster initial mass function CIMF and the formation rate of open clusters. We find that open clusters contributed around 40 percent to the stellar content of the disk during the history of our Galaxy. Hence, open clusters are important building blocks of the Galactic disk.

  18. Defense Industry Clusters in Turkey

    Directory of Open Access Journals (Sweden)

    Kadir Alpaslan Demir

    2016-06-01

    Full Text Available All countries strive for a capable national defense supported by a strong national defense industry. Supporting national defense with imported defense systems has many limitations and risks because the terms of arms trade agreements between countries may easily be influenced by the political climate of the signatories. As a result, establishing an independent national defense requires a strong national defense industry. Furthermore, exporting defense systems may be an important source of national income. National defense industries mostly consist of large-scale defense firms that have the resources required for big defense contracts. However, small to medium enterprises (SMEs do not have the necessary resources, therefore they are at a disadvantage. To overcome this handicap and be part of the business, defense industry clusters mostly consisting of SMEs are being established. Provided that there is good national planning and support in this area, defense clusters consisting of SMEs may play a significant role in industry. SMEs have a chance to offer specialized services, special or customized products when needed. As a result, large defense firms subcontract certain portions of defense projects to SMEs. Since 2010, Turkey has shown signs of continuous improvement in defense industry clustering. In parallel with these developments, this study discusses the importance of clustering in the defense industry, briefly presents the state of the Turkish defense industry as highlighted by national statistics, and presents the current status of defense clusters in Turkey. The novelty of this article consists in its assessment of Turkish defense clusters.

  19. Identification of Urban Leprosy Clusters

    Directory of Open Access Journals (Sweden)

    José Antonio Armani Paschoal

    2013-01-01

    Full Text Available Overpopulation of urban areas results from constant migrations that cause disordered urban growth, constituting clusters defined as sets of people or activities concentrated in relatively small physical spaces that often involve precarious conditions. Aim. Using residential grouping, the aim was to identify possible clusters of individuals in São José do Rio Preto, Sao Paulo, Brazil, who have or have had leprosy. Methods. A population-based, descriptive, ecological study using the MapInfo and CrimeStat techniques, geoprocessing, and space-time analysis evaluated the location of 425 people treated for leprosy between 1998 and 2010. Clusters were defined as concentrations of at least 8 people with leprosy; a distance of up to 300 meters between residences was adopted. Additionally, the year of starting treatment and the clinical forms of the disease were analyzed. Results. Ninety-eight (23.1% of 425 geocoded cases were located within one of ten clusters identified in this study, and 129 cases (30.3% were in the region of a second-order cluster, an area considered of high risk for the disease. Conclusion. This study identified ten clusters of leprosy cases in the city and identified an area of high risk for the appearance of new cases of the disease.

  20. Relativistic Binaries in Globular Clusters

    Directory of Open Access Journals (Sweden)

    Matthew J. Benacquista

    2013-03-01

    Full Text Available Galactic globular clusters are old, dense star systems typically containing 10^4 – 10^6 stars. As an old population of stars, globular clusters contain many collapsed and degenerate objects. As a dense population of stars, globular clusters are the scene of many interesting close dynamical interactions between stars. These dynamical interactions can alter the evolution of individual stars and can produce tight binary systems containing one or two compact objects. In this review, we discuss theoretical models of globular cluster evolution and binary evolution, techniques for simulating this evolution that leads to relativistic binaries, and current and possible future observational evidence for this population. Our discussion of globular cluster evolution will focus on the processes that boost the production of tight binary systems and the subsequent interaction of these binaries that can alter the properties of both bodies and can lead to exotic objects. Direct N-body integrations and Fokker–Planck simulations of the evolution of globular clusters that incorporate tidal interactions and lead to predictions of relativistic binary populations are also discussed. We discuss the current observational evidence for cataclysmic variables, millisecond pulsars, and low-mass X-ray binaries as well as possible future detection of relativistic binaries with gravitational radiation.

  1. The Arches Cluster Mass Function

    CERN Document Server

    Kim, S S; Kudritzki, R P; Najarro, F; Kim, Sungsoo S.; Figer, Donald F.; Kudritzki, Rolf P.

    2006-01-01

    We have analyzed H and K_s-band images of the Arches cluster obtained using the NIRC2 instrument on Keck with the laser guide star adaptive optics (LGS AO) system. With the help of the LGS AO system, we were able to obtain the deepest ever photometry for this cluster and its neighborhood, and derive the background-subtracted present-day mass function (PDMF) down to 1.3 Msun for the 5 arcsec-9 arcsec annulus of the cluster. We find that the previously reported turnover at 6 Msun is simply due to a local bump in the mass function (MF), and that the MF continues to increase down to our 50 % completeness limit (1.3 Msun) with a power-law exponent of Gamma = -0.91 for the mass range of 1.3 < M/Msun < 50. Our numerical calculations for the evolution of the Arches cluster show that the Gamma values for our annulus increase by 0.1-0.2 during the lifetime of the cluster, and thus suggest that the Arches cluster initially had Gamma of -1.0 ~ -1.1, which is only slightly shallower than the Salpeter value.

  2. Atomic clusters with addressable complexity

    Science.gov (United States)

    Wales, David J.

    2017-02-01

    A general formulation for constructing addressable atomic clusters is introduced, based on one or more reference structures. By modifying the well depths in a given interatomic potential in favour of nearest-neighbour interactions that are defined in the reference(s), the potential energy landscape can be biased to make a particular permutational isomer the global minimum. The magnitude of the bias changes the resulting potential energy landscape systematically, providing a framework to produce clusters that should self-organise efficiently into the target structure. These features are illustrated for small systems, where all the relevant local minima and transition states can be identified, and for the low-energy regions of the landscape for larger clusters. For a 55-particle cluster, it is possible to design a target structure from a transition state of the original potential and to retain this structure in a doubly addressable landscape. Disconnectivity graphs based on local minima that have no direct connections to a lower minimum provide a helpful way to visualise the larger databases. These minima correspond to the termini of monotonic sequences, which always proceed downhill in terms of potential energy, and we identify them as a class of biminimum. Multiple copies of the target cluster are treated by adding a repulsive term between particles with the same address to maintain distinguishable targets upon aggregation. By tuning the magnitude of this term, it is possible to create assemblies of the target cluster corresponding to a variety of structures, including rings and chains.

  3. Autophagy selectivity through receptor clustering

    Science.gov (United States)

    Rutenberg, Andrew; Brown, Aidan

    Substrate selectivity in autophagy requires an all-or-none cellular response. We focus on peroxisomes, for which autophagy receptor proteins NBR1 and p62 are well characterized. Using computational models, we explore the hypothesis that physical clustering of autophagy receptor proteins on the peroxisome surface provides an appropriate all-or-none response. We find that larger peroxisomes nucleate NBR1 clusters first, and lose them due to competitive coarsening last, resulting in significant size-selectivity. We then consider a secondary hypothesis that p62 inhibits NBR1 cluster formation. We find that p62 inhibition enhances size-selectivity enough that, even if there is no change of the pexophagy rate, the volume of remaining peroxisomes can significantly decrease. We find that enhanced ubiquitin levels suppress size-selectivity, and that this effect is more pronounced for individual peroxisomes. Sufficient ubiquitin allows receptor clusters to form on even the smallest peroxisomes. We conclude that NBR1 cluster formation provides a viable physical mechanism for all-or-none substrate selectivity in pexophagy. We predict that cluster formation is associated with significant size-selectivity. Now at Simon Fraser University.

  4. Clustering Approach to Stock Market Prediction

    Directory of Open Access Journals (Sweden)

    M.Suresh Babu

    2012-01-01

    Full Text Available Clustering is an adaptive procedure in which objects are clustered or grouped together, based on the principle of maximizing the intra-class similarity and minimizing the inter-class similarity. Various clustering algorithms have been developed which results to a good performance on datasets for cluster formation. This paper analyze the major clustering algorithms: K-Means, Hierarchical clustering algorithm and reverse K means and compare the performance of these three major clustering algorithms on the aspect of correctly class wise cluster building ability of algorithm. An effective clustering method, HRK (Hierarchical agglomerative and Recursive K-means clustering is proposed, to predict the short-term stock price movements after the release of financial reports. The proposed method consists of three phases. First, we convert each financial report into a feature vector and use the hierarchical agglomerative clustering method to divide the converted feature vectors into clusters. Second, for each cluster, we recursively apply the K-means clustering method to partition each cluster into sub-clusters so that most feature vectors in each subcluster belong to the same class. Then, for each sub cluster, we choose its centroid as the representative feature vector. Finally, we employ the representative feature vectors to predict the stock price movements. The experimental results show the proposed method outperforms SVM in terms of accuracy and average profits.

  5. A revised moving cluster distance to the Pleiades open cluster

    Science.gov (United States)

    Galli, P. A. B.; Moraux, E.; Bouy, H.; Bouvier, J.; Olivares, J.; Teixeira, R.

    2017-01-01

    Context. The distance to the Pleiades open cluster has been extensively debated in the literature over several decades. Although different methods point to a discrepancy in the trigonometric parallaxes produced by the Hipparcos mission, the number of individual stars with known distances is still small compared to the number of cluster members to help solve this problem. Aims: We provide a new distance estimate for the Pleiades based on the moving cluster method, which will be useful to further discuss the so-called Pleiades distance controversy and compare it with the very precise parallaxes from the Gaia space mission. Methods: We apply a refurbished implementation of the convergent point search method to an updated census of Pleiades stars to calculate the convergent point position of the cluster from stellar proper motions. Then, we derive individual parallaxes for 64 cluster members using radial velocities compiled from the literature, and approximate parallaxes for another 1146 stars based on the spatial velocity of the cluster. This represents the largest sample of Pleiades stars with individual distances to date. Results: The parallaxes derived in this work are in good agreement with previous results obtained in different studies (excluding Hipparcos) for individual stars in the cluster. We report a mean parallax of 7.44 ± 0.08 mas and distance of pc that is consistent with the weighted mean of 135.0 ± 0.6 pc obtained from the non-Hipparcos results in the literature. Conclusions: Our result for the distance to the Pleiades open cluster is not consistent with the Hipparcos catalog, but favors the recent and more precise distance determination of 136.2 ± 1.2 pc obtained from Very Long Baseline Interferometry observations. It is also in good agreement with the mean distance of 133 ± 5 pc obtained from the first trigonometric parallaxes delivered by the Gaia satellite for the brightest cluster members in common with our sample. Full Table B.2 is only

  6. Properties of Star Clusters - II: Scale Height Evolution of Clusters

    CERN Document Server

    Buckner, Anne S M

    2014-01-01

    Until now it has been impossible to observationally measure how star cluster scale height evolves beyond 1Gyr as only small samples have been available. Here we establish a novel method to determine the scale height of a cluster sample using modelled distributions and Kolmogorov-Smirnov tests. This allows us to determine the scale height with a 25% accuracy for samples of 38 clusters or more. We apply our method to investigate the temporal evolution of cluster scale height, using homogeneously selected sub-samples of Kharchenko et al. (MWSC), Dias et al. (DAML02), WEBDA, and Froebrich et al. (FSR). We identify a linear relationship between scale height and log(age/yr) of clusters, considerably different from field stars. The scale height increases from about 40pc at 1Myr to 75pc at 1Gyr, most likely due to internal evolution and external scattering events. After 1Gyr, there is a marked change of the behaviour, with the scale height linearly increasing with log(age/yr) to about 550pc at 3.5Gyr. The most likely...

  7. A revised moving cluster distance to the Pleiades open cluster

    CERN Document Server

    Galli, P A B; Bouy, H; Bouvier, J; Olivares, J; Teixeira, R

    2016-01-01

    Aims: We provide a new distance estimate for the Pleiades based on the moving cluster method, which will be useful to further discuss the so-called Pleiades distance controversy and compare it with the very precise parallaxes from the Gaia space mission. Methods: We apply a refurbished implementation of the convergent point search method to an updated census of Pleiades stars to calculate the convergent point position of the cluster from stellar proper motions. Then, we derive individual parallaxes for 64 cluster members using radial velocities compiled from the literature, and approximate parallaxes for another 1146 stars based on the spatial velocity of the cluster. This represents the largest sample of Pleiades stars with individual distances to date. Results: The parallaxes derived in this work are in good agreement with previous results obtained in different studies (excluding Hipparcos) for individual stars in the cluster. We report a mean parallax of $7.44\\pm 0.08$~mas and distance of $134.4^{+2.9}_{-2...

  8. FORMATION OF A INNOVATION REGIONAL CLUSTER MODEL

    Directory of Open Access Journals (Sweden)

    G. S. Merzlikina

    2015-01-01

    Full Text Available Summary. As a result of investigation of science and methodical approaches related problems of building and development of innovation clusters there were some issues in functional assignments of innovation and production clusters. Because of those issues, article’s authors differ conceptions of innovation cluster and production cluster, as they explain notion of innovation-production cluster. The main goal of this article is to reveal existing organizational issues in cluster building and its successful development. Based on regional clusters building analysis carried out there was typical practical structure of cluster members interaction revealed. This structure also have its cons, as following: absence cluster orientation to marketing environment, lack of members’ prolonged relations’ building and development system, along with ineffective management of information, financial and material streams within cluster, narrow competence difference and responsibility zones between cluster members, lack of transparence of cluster’s action, low environment changes adaptivity, hard to use cluster members’ intellectual property, and commercialization of hi-tech products. When all those issues listed above come together, it reduces life activity of existing models of innovative cluster-building along with practical opportunity of cluster realization. Because of that, authors offer an upgraded innovative-productive cluster building model with more efficient business processes management system, which includes advanced innovative cluster structure, competence matrix and subcluster responsibility zone. Suggested model differs from other ones by using unified innovative product development control center, which also controls production and marketing realization.

  9. Non-Recycled Pulsars in Globular Clusters

    CERN Document Server

    Lynch, Ryan S; Lorimer, Duncan R; Mnatsakanov, Robert; Turk, Philip J; Ransom, Scott M

    2011-01-01

    We place limits on the population of non-recycled pulsars originating in globular clusters through Monte Carlo simulations and frequentist statistical techniques. We set upper limits on the birth rates of non-recycled cluster pulsars and predict how many may remain in the clusters, and how many may escape the cluster potentials and enter the field of the Galaxy.

  10. Formation of innovative clusters in tourism

    Directory of Open Access Journals (Sweden)

    Stanislav V. Koshcheev

    2011-06-01

    Full Text Available Modern preconditions of development innovative clusters in Russian economy are analyzed. The importance of application of cluster approach to management of innovations in tourism is shown. Necessity formation of innovative clusters in region of tourist specialization for increase of competitiveness of territory is reflected. The model of formation of innovative clusters in tourism is offered.

  11. Clustering by hypergraphs and dimensionality of cluster systems

    CERN Document Server

    Albeverio, S

    2012-01-01

    In the present paper we discuss the clustering procedure in the case where instead of a single metric we have a family of metrics. In this case we can obtain a partially ordered graph of clusters which is not necessarily a tree. We discuss a structure of a hypergraph above this graph. We propose two definitions of dimension for hyperedges of this hypergraph and show that for the multidimensional p-adic case both dimensions are reduced to the number of p-adic parameters. We discuss the application of the hypergraph clustering procedure to the construction of phylogenetic graphs in biology. In this case the dimension of a hyperedge will describe the number of sources of genetic diversity.

  12. Novel Cluster Validity Index for FCM Algorithm

    Institute of Scientific and Technical Information of China (English)

    Jian Yu; Cui-Xia Li

    2006-01-01

    How to determine an appropriate number of clusters is very important when implementing a specific clustering algorithm, like c-means, fuzzy c-means (FCM). In the literature, most cluster validity indices are originated from partition or geometrical property of the data set. In this paper, the authors developed a novel cluster validity index for FCM, based on the optimality test of FCM. Unlike the previous cluster validity indices, this novel cluster validity index is inherent in FCM itself. Comparison experiments show that the stability index can be used as cluster validity index for the fuzzy c-means.

  13. The Nature and Nurture of Star Clusters

    CERN Document Server

    Elmegreen, Bruce G

    2009-01-01

    Star clusters have hierarchical patterns in space and time, suggesting formation processes in the densest regions of a turbulent interstellar medium. Clusters also have hierarchical substructure when they are young, which makes them all look like the inner mixed parts of a pervasive stellar hierarchy. Young field stars share this distribution, presumably because some of them came from dissolved clusters and others formed in a dispersed fashion in the same gas. The fraction of star formation that ends up in clusters is apparently not constant, but may increase with interstellar pressure. Hierarchical structure explains why stars form in clusters and why many of these clusters are self-bound. It also explains the cluster mass function. Halo globular clusters share many properties of disk clusters, including what appears to be an upper cluster cutoff mass. However, halo globulars are self-enriched and often connected with dwarf galaxy streams. The mass function of halo globulars could have initially been like th...

  14. Quantum Monte Carlo methods and lithium cluster properties. [Atomic clusters

    Energy Technology Data Exchange (ETDEWEB)

    Owen, R.K.

    1990-12-01

    Properties of small lithium clusters with sizes ranging from n = 1 to 5 atoms were investigated using quantum Monte Carlo (QMC) methods. Cluster geometries were found from complete active space self consistent field (CASSCF) calculations. A detailed development of the QMC method leading to the variational QMC (V-QMC) and diffusion QMC (D-QMC) methods is shown. The many-body aspect of electron correlation is introduced into the QMC importance sampling electron-electron correlation functions by using density dependent parameters, and are shown to increase the amount of correlation energy obtained in V-QMC calculations. A detailed analysis of D-QMC time-step bias is made and is found to be at least linear with respect to the time-step. The D-QMC calculations determined the lithium cluster ionization potentials to be 0.1982(14) (0.1981), 0.1895(9) (0.1874(4)), 0.1530(34) (0.1599(73)), 0.1664(37) (0.1724(110)), 0.1613(43) (0.1675(110)) Hartrees for lithium clusters n = 1 through 5, respectively; in good agreement with experimental results shown in the brackets. Also, the binding energies per atom was computed to be 0.0177(8) (0.0203(12)), 0.0188(10) (0.0220(21)), 0.0247(8) (0.0310(12)), 0.0253(8) (0.0351(8)) Hartrees for lithium clusters n = 2 through 5, respectively. The lithium cluster one-electron density is shown to have charge concentrations corresponding to nonnuclear attractors. The overall shape of the electronic charge density also bears a remarkable similarity with the anisotropic harmonic oscillator model shape for the given number of valence electrons.

  15. Privacy-preserving distributed clustering

    DEFF Research Database (Denmark)

    Erkin, Zekeriya; Veugen, Thijs; Toft, Tomas

    2013-01-01

    Clustering is a very important tool in data mining and is widely used in on-line services for medical, financial and social environments. The main goal in clustering is to create sets of similar objects in a data set. The data set to be used for clustering can be owned by a single entity, or in s...... provider with computations. Experimental results clearly indicate that the work we present is an efficient way of deploying a privacy-preserving clustering algorithm in a distributed manner......., or in some cases, information from different databases is pooled to enrich the data so that the merged database can improve the clustering effort. However, in either case, the content of the database may be privacy sensitive and/or commercially valuable such that the owners may not want to share their data...... with any other entity, including the service provider. Such privacy concerns lead to trust issues between entities, which clearly damages the functioning of the service and even blocks cooperation between entities with similar data sets. To enable joint efforts with private data, we propose a protocol...

  16. Familial aggregation of cluster headache

    Directory of Open Access Journals (Sweden)

    Simao Cruz

    2013-11-01

    Full Text Available Several studies suggest a strong familial aggregation for cluster headache (CH, but so far none of them have included subjects with probable cluster headache (PCH in accordance with the International Classification of Headache Disorders. Objective To identify cases of probable cluster headache and to assess the familial aggregation of cluster headache by including these subjects. Method Thirty-six patients attending a headache consultation and diagnosed with trigeminal autonomic headaches were subjected to a questionnaire-based interview. A telephone interview was also applied to all the relatives who were pointed out as possibly affected as well as to some of the remaining relatives. Results Twenty-four probands fulfilled the criteria for CH or PCH; they had 142 first-degree relatives, of whom five were found to have CH or PCH, including one case of CH sine headache. The risk for first-degree relatives was observed to be increased by 35- to 46-fold. Conclusion Our results suggest a familial aggregation of cluster headache in the Portuguese population.

  17. Chemistry of Nanoscale Semiconductor Clusters

    CERN Document Server

    Pan, J; Ramakrishna, M V; Pan, Jun; Bahel, Atul; Ramakrishna, Mushti V.

    1995-01-01

    The ground state structures of small silicon clusters are determined through exhaustive tight-binding molecular dynamics simulation studies. These simulations revealed that \\Si{11} is an icosahedron with one missing cap, \\Si{12} is a complete icosahedron, \\Si{13} is a surface capped icosahedron, \\Si{14} is a 4-4-4 layer structure with two caps, \\Si{15} is a 1-5-3-5-1 layer structure, and \\Si{16} is a partially closed cage consisting of five-membered rings. The characteristic feature of these clusters is that they are all surface. Smalley and co-workers discovered that chemisorption reactivities of silicon clusters vary over three orders of magnitude as a function of cluster size. In particular, they found that \\Si{33}, \\Si{39}, and \\Si{45} clusters are least reactive towards various reagents compared to their immediate neighbors in size. We provide insights into this observed reactivity pattern through our stuffed fullerene model. This structural model consists of bulk-like core of five atoms surrounded by fu...

  18. Chemical Reactions of Silicon Clusters

    CERN Document Server

    Ramakrishna, M V; Ramakrishna, Mushti V.; Pan, Jun

    1994-01-01

    Smalley and co-workers discovered that chemisorption reactivities of silicon clusters vary over three orders of magnitude as a function of cluster size. In particular, they found that \\Si{33}, \\Si{39}, and \\Si{45} clusters are least reactive towards various reagents compared to their immediate neighbors in size. We explain these observations based on our stuffed fullerene model. This structural model consists of bulk-like core of five atoms surrounded by fullerene-like surface. Reconstruction of the ideal fullerene geometry gives rise to four-fold coordinated crown atoms and $\\pi$-bonded dimer pairs. This model yields unique structures for \\Si{33}, \\Si{39}, and \\Si{45} clusters without any dangling bonds and thus explains their lowest reactivity towards chemisorption of closed shell reagents. This model is also consistent with the experimental finding of Jarrold and Constant that silicon clusters undergo a transition from prolate to spherical shapes at \\Si{27}. We justify our model based on an in depth analys...

  19. Supermodel Analysis of Galaxy Clusters

    CERN Document Server

    Fusco-Femiano, R; Lapi, A

    2009-01-01

    [abridged] We present the analysis of the X-ray brightness and temperature profiles for six clusters belonging to both the Cool Core and Non Cool Core classes, in terms of the Supermodel (SM) developed by Cavaliere, Lapi & Fusco-Femiano (2009). Based on the gravitational wells set by the dark matter halos, the SM straightforwardly expresses the equilibrium of the IntraCluster Plasma (ICP) modulated by the entropy deposited at the boundary by standing shocks from gravitational accretion, and injected at the center by outgoing blastwaves from mergers or from outbursts of Active Galactic Nuclei. The cluster set analyzed here highlights not only how simply the SM represents the main dichotomy Cool vs. Non Cool Core clusters in terms of a few ICP parameters governing the radial entropy run, but also how accurately it fits even complex brightness and temperature profiles. For Cool Core clusters like A2199 and A2597, the SM with a low level of central entropy straightforwardly yields the characteristic peaked pr...

  20. Large scale cluster computing workshop

    Energy Technology Data Exchange (ETDEWEB)

    Dane Skow; Alan Silverman

    2002-12-23

    Recent revolutions in computer hardware and software technologies have paved the way for the large-scale deployment of clusters of commodity computers to address problems heretofore the domain of tightly coupled SMP processors. Near term projects within High Energy Physics and other computing communities will deploy clusters of scale 1000s of processors and be used by 100s to 1000s of independent users. This will expand the reach in both dimensions by an order of magnitude from the current successful production facilities. The goals of this workshop were: (1) to determine what tools exist which can scale up to the cluster sizes foreseen for the next generation of HENP experiments (several thousand nodes) and by implication to identify areas where some investment of money or effort is likely to be needed. (2) To compare and record experimences gained with such tools. (3) To produce a practical guide to all stages of planning, installing, building and operating a large computing cluster in HENP. (4) To identify and connect groups with similar interest within HENP and the larger clustering community.

  1. AGN Physics from QSO Clustering

    CERN Document Server

    Croom, S; Shanks, T; Outram, P J; Smith, R; Miller, L; Loaring, N; Kenyon, S; Couch, W; Croom, Scott; Boyle, Brian; Shanks, Tom; Outram, Phil; Smith, Robert; Miller, Lance; Loaring, Nicola; Kenyon, Suzanne; Couch, Warrick

    2003-01-01

    We review the current status of QSO clustering measurements, particular with respect to their relevance in understanding AGN physics. Measurements based on the 2dF QSO Redshift Survey (2QZ) find a scale length for QSO clustering of s_0=5.76(+0.17-0.27) h-1 Mpc at a redshift ~1.5, very similar to low redshift galaxies. There is no evidence of evolution in the clustering of QSOs from z~0.5 to z~2.2. This lack of evolution and low clustering amplitude suggests a short life time for AGN activity of the order ~10^6-10^7 years. Large surveys such at the 2QZ and SDSS also allow the the study of QSO environments in 3D for the first time (at least at low redshift), early results from this work seem to show no difference between the environments of QSOs and normal galaxies. Future studies e.g. measuring clustering as a function of black hole mass, and deep QSO surveys should provide further insight into the formation and evolution of AGN.

  2. Learning regularized LDA by clustering.

    Science.gov (United States)

    Pang, Yanwei; Wang, Shuang; Yuan, Yuan

    2014-12-01

    As a supervised dimensionality reduction technique, linear discriminant analysis has a serious overfitting problem when the number of training samples per class is small. The main reason is that the between- and within-class scatter matrices computed from the limited number of training samples deviate greatly from the underlying ones. To overcome the problem without increasing the number of training samples, we propose making use of the structure of the given training data to regularize the between- and within-class scatter matrices by between- and within-cluster scatter matrices, respectively, and simultaneously. The within- and between-cluster matrices are computed from unsupervised clustered data. The within-cluster scatter matrix contributes to encoding the possible variations in intraclasses and the between-cluster scatter matrix is useful for separating extra classes. The contributions are inversely proportional to the number of training samples per class. The advantages of the proposed method become more remarkable as the number of training samples per class decreases. Experimental results on the AR and Feret face databases demonstrate the effectiveness of the proposed method.

  3. Clusters - Territorial Networks. Where to?

    Directory of Open Access Journals (Sweden)

    Luiza Nicoleta Radu

    2013-08-01

    Full Text Available Globalization has led to an increased international trade relations between organizations spatially separated. This determined a greater spatial differentiation influenced by local and regional competition production systems. Territoriality has been considered as the main cause for the development of active areas, explaining also the success of certain local systems of production that became competitive on a global scale. The new school of regional competitiveness promoted by Porter (2003 identifies the cluster industry as a source of competitive advantages, supporting the identification and cluster setting – up as an objective of the public policy. In the last few years, clusters became an important basis for the new policies promoted at the level of the European Union. The challenges established through the Lisbon Strategy, respectively “to make the Europe the most competitive and dynamic based knowledge economy”, determinate a new approach of the economic policy in order to increase competitiveness. For the regional economy, the cluster has the aim to develop new strategies focused on the economic sectors of the regional development, by taking into account sectoral advantages. However, in terms of economic activities promoted at regional level, the spatial development is an essential component for increasing EU competitiveness in terms of economic globalization trends, regional networks being considered the most advanced form of cluster in the economic sector.

  4. Some Remarks on Extragalactic Globular Clusters

    CERN Document Server

    Richtler, T

    2005-01-01

    I comment (in a review fashion) on a few selected topics in the field of extragalactic globular clusters with strong emphasis on recent work. The topics are: bimodality in the colour distribution of cluster systems, young massive clusters, and the brightest old clusters. Globular cluster research, perhaps more than ever, has lead to important (at least to astronomers) progress and problems in galaxy structure and formation.

  5. Internal gettering by metal alloy clusters

    Science.gov (United States)

    Buonassisi, Anthony; Heuer, Matthias; Istratov, Andrei A.; Pickett, Matthew D.; Marcus, Mathew A.; Weber, Eicke R.

    2010-07-27

    The present invention relates to the internal gettering of impurities in semiconductors by metal alloy clusters. In particular, intermetallic clusters are formed within silicon, such clusters containing two or more transition metal species. Such clusters have melting temperatures below that of the host material and are shown to be particularly effective in gettering impurities within the silicon and collecting them into isolated, less harmful locations. Novel compositions for some of the metal alloy clusters are also described.

  6. Investigating Bimodal Clustering in Human Mobility

    CERN Document Server

    Bagrow, James P; 10.1109/CSE.2009.283

    2009-01-01

    We apply a simple clustering algorithm to a large dataset of cellular telecommunication records, reducing the complexity of mobile phone users' full trajectories and allowing for simple statistics to characterize their properties. For the case of two clusters, we quantify how clustered human mobility is, how much of a user's spatial dispersion is due to motion between clusters, and how spatially and temporally separated clusters are from one another.

  7. Temporary Clusters and Knowledge Creation

    DEFF Research Database (Denmark)

    Maskell, Peter; Bathelt, Harald; Malmberg, Anders

    2004-01-01

    to distant markets and technologies. Third, it compares such temporaryclusters with permanent territorial hubs within their respective sector or industry. If regularparticipation in temporary clusters could satisfy a firm's need to learn through interactionwith suppliers, customers, peers and rivals, why...... or participating in such events are means toidentify the current market frontier, take stock of relative competitive positions and formfuture plans. These events exhibit many of the characteristics ascribed to permanentclusters, albeit in a temporary, periodic and intensified form. The temporary clusters...... is the phenomenon of permanent clusteringso pervasive?The answer, it is claimed, lies in the restrictions imposed on economic activity whenknowledge and ideas are transformed into valuable products and services. The paper shedsnew light on how interaction among firms in current clusters coincides...

  8. The state and creative clusters

    DEFF Research Database (Denmark)

    Vang, Jan; Jakobsen, Hannes

    2013-01-01

    Studies on the spatial organisation of so-called creative industries have exploded the last decade. This has resulted in an impressive amount of research on the clustering of creative industries, their reliance on buzz and why they are based on projects, and so forth. This literature has, however...... creative industries, especially film industries outside Hollywood. Based on an original empirical study of the Danish film cluster we show how it has emerged almost from scratch and positioned itself as a noteworthy player on the global scene industry during the last 20 years. Special attention is paid......, neglected paying attention to the role of the state in general but more importantly in facilitating the emergence of a film cluster from scratch in the context of global Hollywood dominance. This is a problem as the state plays a central role in constructing catching up oriented competitiveness in many...

  9. Seismic constraints on open clusters

    CERN Document Server

    Piau, L; Turck-Chièze, S

    2005-01-01

    We derive knowledge on the global and structural parameters of low-mass stars using asteroseismology and taking advantage of the stellar collective behavior within open clusters. We build stellar models and compute the seismic signal expected from main sequence objects in the 0.8-1.6 Msun range. We first evaluate apparent magnitudes and oscillations-induced luminosity fluctuations expected in the Hyades, the Pleiades and the alpha Persei clusters. The closest cluster presents a feasible challenge to observational asteroseismology in the present and near future. We combine seismological and classical computations to address three questions: what can be inferred about 1) mass, 2) composition and 3) extension of outer convection zones of solar analogs in the Hyades. The first issue relies on the strong sensitivity of the large separation to mass. Then large separations and second differences are used to respectively constrain metal and helium fractions in the Hyades.When plotted for several masses, the relation ...

  10. Spherical k-Means Clustering

    Directory of Open Access Journals (Sweden)

    Kurt Hornik

    2012-09-01

    Full Text Available Clustering text documents is a fundamental task in modern data analysis, requiring approaches which perform well both in terms of solution quality and computational efficiency. Spherical k-means clustering is one approach to address both issues, employing cosine dissimilarities to perform prototype-based partitioning of term weight representations of the documents.This paper presents the theory underlying the standard spherical k-means problem and suitable extensions, and introduces the R extension package skmeans which provides a computational environment for spherical k-means clustering featuring several solvers: a fixed-point and genetic algorithm, and interfaces to two external solvers (CLUTO and Gmeans. Performance of these solvers is investigated by means of a large scale benchmark experiment.

  11. Author Clustering on Large Bibliographies

    CERN Document Server

    Sterz, Christoph

    2014-01-01

    We analyze and design an algorithm for clustering large sets of authors in Bibliographies. Not considering a distance function for a mutual comparison, but transforming the data into a multidimensional metric space, the algorithm described is similar to locally sensitive hashing. The task lies in the field of Record-Linkage. The algorithm was designed and performed based on the data of the CERN Document Server, consisting out of more than 1.7 million metadata entries and is part of the digital assets-managing-software invenio. Meant as a prototype, the algorithm performs efficiently, clustering all authors on CDS in under 30 minutes. We will discuss extensions improving the recall rate, wich still remains inferior to the currently used clustering-approach.

  12. Consensus clustering in complex networks

    CERN Document Server

    Lancichinetti, Andrea; 10.1038/srep00336

    2012-01-01

    The community structure of complex networks reveals both their organization and hidden relationships among their constituents. Most community detection methods currently available are not deterministic, and their results typically depend on the specific random seeds, initial conditions and tie-break rules adopted for their execution. Consensus clustering is used in data analysis to generate stable results out of a set of partitions delivered by stochastic methods. Here we show that consensus clustering can be combined with any existing method in a self-consistent way, enhancing considerably both the stability and the accuracy of the resulting partitions. This framework is also particularly suitable to monitor the evolution of community structure in temporal networks. An application of consensus clustering to a large citation network of physics papers demonstrates its capability to keep track of the birth, death and diversification of topics.

  13. Evolution of Nuclear Star Clusters

    CERN Document Server

    Merritt, David

    2008-01-01

    Two-body relaxation times of nuclear star clusters are short enough that gravitational encounters should substantially affect their structure in 10 Gyr or less. In nuclear star clusters without massive black holes, dynamical evolution is a competition between core collapse, which causes densities to increase, and heat input from the surrounding galaxy, which causes densities to decrease. The maximum extent of a nucleus that can resist expansion is derived numerically for a wide range of initial conditions; observed nuclei are shown to be compact enough to resist expansion, although there may have been an earlier generation of low-density nuclei that were dissolved. An evolutionary model for NGC 205 is presented which suggests that the nucleus of this galaxy has already undergone core collapse. Adding a massive black hole to a nucleus inhibits core collapse, and nuclear star clusters with black holes always expand, due primarily to heat input from the galaxy. The expansion rate is smaller for larger black hole...

  14. Nonlinear analysis of EAS clusters

    CERN Document Server

    Zotov, M Yu; Fomin, Y A; Fomin, Yu. A.

    2002-01-01

    We apply certain methods of nonlinear time series analysis to the extensive air shower clusters found earlier in the data set obtained with the EAS-1000 Prototype array. In particular, we use the Grassberger-Procaccia algorithm to compute the correlation dimension of samples in the vicinity of the clusters. The validity of the results is checked by surrogate data tests and some additional quantities. We compare our conclusions with the results of similar investigations performed by the EAS-TOP and LAAS groups.

  15. Clusters of Pneumocystis carinii pneumonia

    DEFF Research Database (Denmark)

    Helweg-Larsen, J; Tsolaki, A G; Miller, Raymonde

    1998-01-01

    Genotyping at the internal transcribed spacer (ITS) regions of the nuclear rRNA operon was performed on isolates of P. carinii sp. f. hominis from three clusters of P. carinii pneumonia among eight patients with haematological malignancies and six with HIV infection. Nine different ITS sequence...... types of P. carinii sp. f. hominis were identified in the samples from the patients with haematological malignancies, suggesting that this cluster of cases of P. carinii pneumonia was unlikely to have resulted from nosocomial transmission. A common ITS sequence type was observed in two of the patients...

  16. Communication Optimization for SMP Clusters

    Institute of Scientific and Technical Information of China (English)

    林伟坚; 李志光; 陈文光; 郑纬民

    2001-01-01

    Shared Memory Processors (SMP) workstation clusters are becomingmore and more popular. To optimize communication between the workstations, a new graph partition problem was developed to schedule tasks in SMP clusters. The problem is NP-complete and a heuristic algorithm was developed based on Lee, Kim and Park's algorithm. Experimental results indicate that our algorithm outperforms theirs, especially when the number of partitions is large. This algorithm can be integrated in a parallelizing compiler as a back end optimizer for the distributed code generator.

  17. Epistemic communities and cluster dynamics

    DEFF Research Database (Denmark)

    Håkanson, Lars

    2003-01-01

    This paper questions the prevailing notions that firms within industrial clusters have privi-leged access to `tacit knowledge' that is unavailable - or available only at high cost - to firms located elsewhere, and that such access provides competitive advantages that help to explain the growth...... and development of both firms and regions. It outlines a model of cluster dynam-ics emphasizing two mutually interdependent processes: the concentration of specialized and complementary epistemic communities, on the one hand, and entrepreneurship and a high rate of new firm formation on the other....

  18. The IMF of Globular Clusters

    Science.gov (United States)

    De Marchi, G.; Paresce, F.

    1999-12-01

    Accurate luminosity functions (LF) for a dozen globular clusters have now been measured at or just beyond their half-light radius using HST. They span almost the entire cluster main sequence below 0.75 MO. All these clusters exhibit LF that rise continuously from an absolute I magnitude MI 6 to a peak at MI 8.5-9 and then drop with increasing MI. Transformation of the LF into mass functions (MF) by means of the most recent mass luminosity relations that are consistent with all presently available data on the physical properties of low mass, low metallicity stars shows that all the LF observed so far can be obtained from MF having the shape of a log-normal distribution with characteristic mass mc=0.33 +/- 0.03 MO and standard deviation sigma =1.81 +/- 0.19. In particular, the LF of the four clusters in the sample that extend well beyond the peak luminosity down to close to the Hydrogen burning limit (NGC6341, NGC6397, NGC6752, and NGC6809) can only be reproduced by such distributions and not by a single power-law in the 0.1 - 0.6 MO range. After correction for the effects of mass segregation, the variation of the ratio of the number of higher to lower mass stars with cluster mass or any simple orbital parameter or the expected time to disruption recently computed for these clusters shows no statistically significant trend over a range of this last parameter of more than a factor of 100. We conclude that the global MF of these clusters have not been measurably modified by evaporation and tidal interactions with the Galaxy and, thus, should reflect the initial distribution of stellar masses. Since the log-normal function that we find is also very similar to the one obtained independently for much younger clusters and to the form expected theoretically, the implication seems to be unavoidable that it represents the true stellar IMF for this type of stars in this mass range.

  19. Clustering of Sun Exposure Measurements

    DEFF Research Database (Denmark)

    Have, Anna Szynkowiak; Larsen, Jan; Hansen, Lars Kai

    2002-01-01

    Sun-habits exposure and eventually assessing the risk of skin cancer. A general probabilistic framework originally developed for text and Web mining is demonstrated to be useful for clustering of behavioral data. The framework combines principal component subspace projection with probabilistic......In a medically motivated Sun-exposure study, questionnaires concerning Sun-habits were collected from a number of subjects together with UV radiation measurements. This paper focuses on identifying clusters in the heterogeneous set of data for the purpose of understanding possible relations between...

  20. Spontaneous emission of heavy clusters

    Energy Technology Data Exchange (ETDEWEB)

    Poenaru, D.N.; Ivascu, M. (Central Inst. of Physics, Bucharest (Romania)); Sandulescu, A. (Joint Inst. for Nuclear Research, Dubna (USSR)); Greiner, W. (Frankfurt Univ. (Germany, F.R.))

    1984-08-01

    The lifetimes of some heavy nuclei relative to the spontaneous emission of various clusters heavier than the alpha particle are estimated with a model extended from the fission theory of alpha decay, showing that this phenomenon is a new manifestation of the nuclear shell structure. A greater probability is obtained for parent-heavy-cluster combinations leading to a magic or almost magic daughter nucleus. The analytical formula obtained allows the handling of a large number of cases to search for new kinds of radioactivities.

  1. Noninvasive neuromodulation in cluster headache

    DEFF Research Database (Denmark)

    Láinez, Miguel J A; Jensen, Rigmor

    2015-01-01

    using this approach. RECENT FINDINGS: Techniques as occipital nerve stimulation or sphenopalatine ganglion stimulation are recommended as first-line therapy in refractory cluster patients, but they are invasive and maybe associated with complications. Noninvasive vagal nerve stimulation with an external......: In the last decade, invasive neuromodulation treatments have demonstrated good efficacy in cluster refractory patients. Noninvasive approaches such as the noninvasive vagal nerve stimulation have shown efficacy in one trial and could be an easier alternative in the management of this debilitating headache. We...

  2. Fission approach to cluster radioactivity

    Indian Academy of Sciences (India)

    D N Poenaru; R A Gherghescu

    2015-09-01

    Fission theory is used to explain decay. Also, the analytical superasymmetric fission (ASAF) model is successfully employed to make a systematic search and to predict, with other models, cluster radioactivity. The macroscopic–microscopic method is illustrated for the superheavy nucleus 286Fl. Then a few results of the theoretical approach of decay (ASAF, UNIV and semFIS models), cluster decay (ASAF and UNIV) and spontaneous fission dynamics are described with Werner–Wheeler and cranking inertia. UNIV denotes universal curve and semFIS the fission-based semiempirical formula.

  3. ERBF network with immune clustering

    Institute of Scientific and Technical Information of China (English)

    宫新保; 臧小刚; 周希朗

    2004-01-01

    Based on immune clustering and evolutionary programming(EP), a hybrid algorithm to train the RBF network is proposed. An immune fuzzy C-means clustering algorithm (IFCM) is used to adaptively specify the amount and initial positions of the RBF centers according to input data set; then the RBF network is trained with EP that tends to global optima. The application of the hybrid algorithm in multiuser detection problem demonstrates that the RBF network trained with the algorithm has simple network structure with good generalization ability.

  4. Intra Cluster Globular Clusters around NGC 1399 in Fornax?

    CERN Document Server

    Schuberth, Y; Bassino, L; Hilker, M

    2007-01-01

    We investigate whether the globular clusters (GCs) in the recently published sample of GCs in the Fornax cluster by Bergond and coworkers are indeed intra-cluster objects. We combine the catalogue of radial velocity measurements by Bergond et al. with our CTIO MOSAIC photometry in the Washington system and analyse the relation of metal-poor and metal-rich GCs with their host galaxies. The metal-rich GCs appear to be kinematically associated with their respective host galaxies. The vast majority of the metal-poor GCs found in between the galaxies of the Fornax cluster have velocities which are consistent with them being members of the very extended NGC 1399 GC system. We find that when the sample is restricted to the most accurate velocity measurements, the GC velocity dispersion profile can be described with a mass model derived for the NGC 1399 GC system within 80 kpc. We identify one ``vagrant'' GC whose radial velocity suggests that it is not bound to any galaxy unless its orbit has a very large apogalacti...

  5. Clusters galore: insights about environmental clusters from probability theory.

    Science.gov (United States)

    Neutra, R; Swan, S; Mack, T

    1992-12-15

    The posterior probability of a causal explanation given that an environmental cancer cluster is statistically significant depends on the prior probability of an environmentally caused cluster, the sensitivity of the statistical test and its specificity. The prior probability is low, because it is rare to have enough carcinogen in the general environment to cause a relative risk of cancer high enough to achieve statistical significance in a small geographic area. The sensitivity and specificity are not great. The likelihood that a census tract escapes statistically significant elevations in all 80 types of cancer can be calculated. Many of the thousands of census tracts will, by chance alone, have at least one type of cancer whose elevation is statistically significant. Actual observation from a large cancer registry confirms this probabilistic prediction. Applying the principles of Bayes' Theorem would suggest that most statistically significant environmental cancer clusters are not due to environmental carcinogens. One would have to investigate hundreds of environmental cancer clusters to find one with a true environmental cause.

  6. Brightest Cluster Galaxies in the Extended GMRT radio halo cluster sample. Radio properties and cluster dynamics

    CERN Document Server

    Kale, Ruta; Cassano, Rossella; Giacintucci, Simona; Bardelli, sandro; Dallacasa, Daniele; Zucca, Elena

    2015-01-01

    Brightest Cluster Galaxies (BCGs) show exceptional properties over the whole electromagnetic spectrum. Their special location at the centres of galaxy clusters raises the question of the role of the environment on their radio properties. To decouple the effect of the galaxy mass and of the environment in their statistical radio properties, we investigate the possible dependence of the occurrence of radio loudness and of the fractional radio luminosity function on the dynamical state of the hosting cluster. We studied the radio properties of the BCGs in the Extended GMRT Radio Halo Survey (EGRHS). We obtained a statistical sample of 59 BCGs, which was divided into two classes, depending on the dynamical state of the host cluster, i.e. merging (M) and relaxed (R). Among the 59 BCGs, 28 are radio-loud, and 31 are radio--quiet. The radio-loud sources are located favourably located in relaxed clusters (71\\%), while the reverse is true for the radio-quiet BCGs, mostly located in merging systems (81\\%). The fraction...

  7. Globular Cluster Systems in Brightest Cluster Galaxies. III: Beyond Bimodality

    Science.gov (United States)

    Harris, William E.; Ciccone, Stephanie M.; Eadie, Gwendolyn M.; Gnedin, Oleg Y.; Geisler, Douglas; Rothberg, Barry; Bailin, Jeremy

    2017-01-01

    We present new deep photometry of the rich globular cluster (GC) systems around the Brightest Cluster Galaxies UGC 9799 (Abell 2052) and UGC 10143 (Abell 2147), obtained with the Hubble Space Telescope (HST) ACS and WFC3 cameras. For comparison, we also present new reductions of similar HST/ACS data for the Coma supergiants NGC 4874 and 4889. All four of these galaxies have huge cluster populations (to the radial limits of our data, comprising from 12,000 to 23,000 clusters per galaxy). The metallicity distribution functions (MDFs) of the GCs can still be matched by a bimodal-Gaussian form where the metal-rich and metal-poor modes are separated by ≃ 0.8 dex, but the internal dispersions of each mode are so large that the total MDF becomes very broad and nearly continuous from [Fe/H] ≃ ‑2.4 to solar. There are, however, significant differences between galaxies in the relative numbers of metal-rich clusters, suggesting that they underwent significantly different histories of mergers with massive gas-rich halos. Last, the proportion of metal-poor GCs rises especially rapidly outside projected radii R≳ 4 {R}{eff}, suggesting the importance of accreted dwarf satellites in the outer halo. Comprehensive models for the formation of GCs as part of the hierarchical formation of their parent galaxies will be needed to trace the systematic change in structure of the MDF with galaxy mass, from the distinctly bimodal form in smaller galaxies up to the broad continuum that we see in the very largest systems.

  8. Innovation performance and clusters : a dynamic capability perspective on regional technology clusters

    NARCIS (Netherlands)

    Röttmer, Nicole

    2009-01-01

    This research provides a novel, empirically tested, actionable theory of cluster innovativeness. Cluster innovativeness has for long been subject of research and resulting policy efforts. The cluster's endowment with assets, such as specialized labor, firms, research institutes, existing regional ne

  9. Fuzzy Clustering with Novel Separable Criterion

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Fuzzy clustering has been used widely in pattern recognition, image processing, and data analysis. An improved fuzzy clustering algorithm was developed based on the conventional fuzzy c-means (FCM) to obtain better quality clustering results. The update equations for the membership and the cluster center are derived from the alternating optimization algorithm. Two fuzzy scattering matrices in the objective function assure the compactness between data points and cluster centers, and also strengthen the separation between cluster centers in terms of a novel separable criterion. The clustering algorithm properties are shown to be an improvement over the FCM method's properties. Numerical simulations show that the clustering algorithm gives more accurate clustering results than the FCM method.

  10. THEORETICAL FOUNDATIONS OF FORMATION OF ENTREPRENEURIAL CLUSTER

    Directory of Open Access Journals (Sweden)

    Rizhikova A. M.

    2015-06-01

    Full Text Available This article investigates the development of entrepreneurial cluster set direction to support the creation of innovation clusters in Russia. In the face of increasing international competition, one of the most effective ways of development of small and medium-sized enterprises in the field of innovation is their clustering. We have discussed foreign experience of studying cluster initiatives and events on social development of the regions in the context of sociological knowledge about clusters. We have revealed the meaning of an innovation cluster and the difference between business and innovation clusters. The analysis has shown that a key advantage of the business cluster in relation to the network is the participation of state authorities, as well as functional and territorial factor. On the basis of the author's research we have highlighted a number of problems which solution has been carried out through the creation of business clusters

  11. Chaos theory perspective for industry clusters development

    Science.gov (United States)

    Yu, Haiying; Jiang, Minghui; Li, Chengzhang

    2016-03-01

    Industry clusters have outperformed in economic development in most developing countries. The contributions of industrial clusters have been recognized as promotion of regional business and the alleviation of economic and social costs. It is no doubt globalization is rendering clusters in accelerating the competitiveness of economic activities. In accordance, many ideas and concepts involve in illustrating evolution tendency, stimulating the clusters development, meanwhile, avoiding industrial clusters recession. The term chaos theory is introduced to explain inherent relationship of features within industry clusters. A preferred life cycle approach is proposed for industrial cluster recessive theory analysis. Lyapunov exponents and Wolf model are presented for chaotic identification and examination. A case study of Tianjin, China has verified the model effectiveness. The investigations indicate that the approaches outperform in explaining chaos properties in industrial clusters, which demonstrates industrial clusters evolution, solves empirical issues and generates corresponding strategies.

  12. Scalable classification by clustering: Hybrid can be better than Pure

    Institute of Scientific and Technical Information of China (English)

    Deng Shengchun; He Zengyou; Xu Xiaofei

    2007-01-01

    The problem of scalable classification by clustering in large databases was discussed. Clustering based classification method first generates clusters using clustering algorithms . To classify new coming data points , it finds the k nearest clusters of the data point as neighbors , and assign each data point to the dominant class of these neighbors . Existing algorithms incorporated class information in making clustering decisions and produced pure clusters (each cluster associated with only one class) . We presented hybrid cluster based algorithms , which produce clusters by unsupervised clustering and allow each cluster associated with multiple classes . Experimental results show that hybrid cluster based algorithms outperform pure ones in both classification accuracy and training speed.

  13. Fuzzy clustering with Minkowski distance

    NARCIS (Netherlands)

    P.J.F. Groenen (Patrick); U. Kaymak (Uzay); J.M. van Rosmalen (Joost)

    2006-01-01

    textabstractDistances in the well known fuzzy c-means algorithm of Bezdek (1973) are measured by the squared Euclidean distance. Other distances have been used as well in fuzzy clustering. For example, Jajuga (1991) proposed to use the L_1-distance and Bobrowski and Bezdek (1991) also used the L_inf

  14. Dettagli utilizzo cluster HP "Lagrange"

    OpenAIRE

    2008-01-01

    Dal mese di marzo il CILEA ospita e gestisce il cluster “lagrange” costituito da 208 nodi bi-processore Intel quad-core 5460. L'articolo intende presentare le problematiche relative all'utilizzo della macchina fornendo le istruzioni operative necessarie all'uso più efficace.

  15. Neutrinos as cluster dark matter

    NARCIS (Netherlands)

    Sanders, R. H.

    2007-01-01

    The dynamical mass of clusters of galaxies, calculated in terms of MOdified Newtonian Dynamics (MOND), is a factor of 2 or 3 times smaller than the Newtonian dynamical mass but remains significantly larger than the observed baryonic mass in the form of hot gas and stars in galaxies. Here I consider

  16. Transport Properties of Binary Clusters

    Institute of Scientific and Technical Information of China (English)

    WAN Hai-Qing; ZHOU Yan-Hong; XU Ying

    2007-01-01

    We present first-principles studies on the transport properties of small silicon and aluminium clusters:Al2,Si2,Al4 and AISi sandwiched between two Al(100) electrodes.The variation of the equilibrium conductance as a function of contact distance for these two-probe systems is probed.Our results show that the transport properties are dependent on both the specific nanostructure and the separation distance between the central molecule and the electrodes.For equilibrium transport properties.the clusters with the similar structure show similar transmission spectra at large distances.the small difference can be explained by the electron filling.For current-voltage characteristics,all the clusters show the metallic behaviour at lower bias,however very different non-linear behaviour can be observed at higher bias.For AISi and Al2,when the distance between the central cluster and the electrodes is 3.5A.large negative differential resistance (NDR) can be found in the bias range 0.8V~1.4V.

  17. Cluster Analysis of Adolescent Blogs

    Science.gov (United States)

    Liu, Eric Zhi-Feng; Lin, Chun-Hung; Chen, Feng-Yi; Peng, Ping-Chuan

    2012-01-01

    Emerging web applications and networking systems such as blogs have become popular, and they offer unique opportunities and environments for learners, especially for adolescent learners. This study attempts to explore the writing styles and genres used by adolescents in their blogs by employing content, factor, and cluster analyses. Factor…

  18. Clusters, Innovation and Tertiary Education

    Science.gov (United States)

    Madgett, Paul; Belanger, Charles H.; Mount, Joan

    2005-01-01

    The purpose of this paper is to investigate the integration between research findings produced at the University and Community College levels and local SMEs (small and medium enterprises) as it impacts regional innovation systems and in particular the prospect of cluster formation. The paper explores certain factors that have been identified in…

  19. Clustering Teachers' Motivations for Teaching

    Science.gov (United States)

    Visser-Wijnveen, Gerda J.; Stes, Ann; Van Petegem, Peter

    2014-01-01

    The motivation to teach is a powerful, yet neglected, force in teaching at institutes of higher education. A better understanding of academics' motivations for teaching is necessary. The aim of this mixed-method study was to identify groups with distinctively different motivations for teaching. Six clusters were identified: expertise, duty,…

  20. [Cluster analysis and its application].

    Science.gov (United States)

    Půlpán, Zdenĕk

    2002-01-01

    The study exploits knowledge-oriented and context-based modification of well-known algorithms of (fuzzy) clustering. The role of fuzzy sets is inherently inclined towards coping with linguistic domain knowledge also. We try hard to obtain from rich diverse data and knowledge new information about enviroment that is being explored.

  1. Clustering of absorption line systems

    CERN Document Server

    Petitjean, P

    1996-01-01

    Absorption line systems are luminosity unbiased tracers of the spatial distribution of baryons over most of the history of the Universe. I review the importance of studying the clustering properties of the absorbers and the impact of VLT in this subject. The primary aim of the project is to track the evolution of the structures of the Universe back in time.

  2. Innovation clusters in sound progress

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    @@ The achievements of S&T innovation clusters,a CAS drive to set up an S&T network for sharing knowledge,information and resources in order to deal with major S&T problems.were applauded by a high-caliber panel of S&T experts.

  3. Genomic Signal Enhancement by Clustering

    Institute of Scientific and Technical Information of China (English)

    ZHENG Wei-Mou

    2003-01-01

    Weight matrix models for signal sequence motif are simple. A main limitation of the models is the assumption of independence between positions. Signal enhancement is achieved by taking the total likelihood as the objective function for maximization to cluster sequences into groups with different patterns. As an example, the initial and terminal signals for translation in rice genome are examined.

  4. Automated Clustering of Similar Amendments

    CERN Document Server

    CERN. Geneva

    2016-01-01

    The Italian Senate is clogged by computer-generated amendments. This talk will describe a simple strategy to cluster them in an automated fashion, so that the appropriate Senate procedures can be used to get rid of them in one sweep.

  5. Thermodynamic basis for cluster kinetics

    DEFF Research Database (Denmark)

    Hu, Lina; Bian, Xiufang; Qin, Xubo;

    2006-01-01

    Due to the inaccessibility of the supercooled region of marginal metallic glasses (MMGs) within the experimental time window, we study the cluster kinetics above the liquidus temperature, Tl, to acquire information on the fragility of the MMG systems. Thermodynamic basis for the stability...

  6. An Improved Cluster Richness Estimator

    Energy Technology Data Exchange (ETDEWEB)

    Rozo, Eduardo; /Ohio State U.; Rykoff, Eli S.; /UC, Santa Barbara; Koester, Benjamin P.; /Chicago U. /KICP, Chicago; McKay, Timothy; /Michigan U.; Hao, Jiangang; /Michigan U.; Evrard, August; /Michigan U.; Wechsler, Risa H.; /SLAC; Hansen, Sarah; /Chicago U. /KICP, Chicago; Sheldon, Erin; /New York U.; Johnston, David; /Houston U.; Becker, Matthew R.; /Chicago U. /KICP, Chicago; Annis, James T.; /Fermilab; Bleem, Lindsey; /Chicago U.; Scranton, Ryan; /Pittsburgh U.

    2009-08-03

    Minimizing the scatter between cluster mass and accessible observables is an important goal for cluster cosmology. In this work, we introduce a new matched filter richness estimator, and test its performance using the maxBCG cluster catalog. Our new estimator significantly reduces the variance in the L{sub X}-richness relation, from {sigma}{sub lnL{sub X}}{sup 2} = (0.86 {+-} 0.02){sup 2} to {sigma}{sub lnL{sub X}}{sup 2} = (0.69 {+-} 0.02){sup 2}. Relative to the maxBCG richness estimate, it also removes the strong redshift dependence of the richness scaling relations, and is significantly more robust to photometric and redshift errors. These improvements are largely due to our more sophisticated treatment of galaxy color data. We also demonstrate the scatter in the L{sub X}-richness relation depends on the aperture used to estimate cluster richness, and introduce a novel approach for optimizing said aperture which can be easily generalized to other mass tracers.

  7. Symptom Clusters among Young Adolescents.

    Science.gov (United States)

    Knishkowsky, Barry; And Others

    1995-01-01

    Examines recurrent psychosomatic symptoms and symptom clusters among Israeli school children (n=259). Results of a questionnaire that asked about the frequency of 8 psychosomatic and 8 organic complaints indicated that girls had a higher prevalence than boys for 8 of the symptoms, and that abdominal pain and headache were each reported as an…

  8. Progressive Exponential Clustering-Based Steganography

    Directory of Open Access Journals (Sweden)

    Li Yue

    2010-01-01

    Full Text Available Cluster indexing-based steganography is an important branch of data-hiding techniques. Such schemes normally achieve good balance between high embedding capacity and low embedding distortion. However, most cluster indexing-based steganographic schemes utilise less efficient clustering algorithms for embedding data, which causes redundancy and leaves room for increasing the embedding capacity further. In this paper, a new clustering algorithm, called progressive exponential clustering (PEC, is applied to increase the embedding capacity by avoiding redundancy. Meanwhile, a cluster expansion algorithm is also developed in order to further increase the capacity without sacrificing imperceptibility.

  9. Co-clustering models, algorithms and applications

    CERN Document Server

    Govaert, Gérard

    2013-01-01

    Cluster or co-cluster analyses are important tools in a variety of scientific areas. The introduction of this book presents a state of the art of already well-established, as well as more recent methods of co-clustering. The authors mainly deal with the two-mode partitioning under different approaches, but pay particular attention to a probabilistic approach. Chapter 1 concerns clustering in general and the model-based clustering in particular. The authors briefly review the classical clustering methods and focus on the mixture model. They present and discuss the use of different mixture

  10. CLOC: Cluster Luminosity Order-Statistic Code

    Science.gov (United States)

    Da Silva, Robert L.; Krumholz, Mark R.; Fumagalli, Michele; Fall, S. Michael

    2016-02-01

    CLOC computes cluster order statistics, i.e. the luminosity distribution of the Nth most luminous cluster in a population. It is flexible and requires few assumptions, allowing for parametrized variations in the initial cluster mass function and its upper and lower cutoffs, variations in the cluster age distribution, stellar evolution and dust extinction, as well as observational uncertainties in both the properties of star clusters and their underlying host galaxies. It uses Markov chain Monte Carlo methods to search parameter space to find best-fitting values for the parameters describing cluster formation and disruption, and to obtain rigorous confidence intervals on the inferred values.

  11. Expected Number Counts of Radio Galaxy Clusters

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Clusters of galaxies may contain radio sources if they still experience successive mergers at present. This has been confirmed by radio observations that about 30% of nearby clusters possess radio halos. We present a theoretical prediction of radio cluster counts using a semi-analytic approach which incorporates the empirical correlation between radio power and dynamical mass of clusters, and the cluster mass function described by the Press-Schechter formalism. The total population of radio clusters over the whole sky and their redshift distribution are given.

  12. Ionization of Water Clusters is Mediated by Exciton Energy Transfer from Argon Clusters

    Energy Technology Data Exchange (ETDEWEB)

    Golan, Amir; Ahmed, Musahid

    2012-01-25

    The exciton energy deposited in an argon cluster, (Arn ,< n=20>) using VUV radiation is transferred to softly ionize doped water clusters, ((H2O)n, n=1-9) leading to the formation of non-fragmented clusters. Following the initial excitation, electronic energy is channeled to ionize the doped water cluster while evaporating the Ar shell, allowing identification of fragmented and complete water cluster ions. Examination of the photoionization efficiency curve shows that cluster evaporation from excitons located above 12.6 eV are not enough to cool the energized water cluster ion, and leads to their dissociation to (H2O)n-2H+ (protonated) clusters.

  13. An extended EM algorithm for subspace clustering

    Institute of Scientific and Technical Information of China (English)

    Lifei CHEN; Qingshan JIANG

    2008-01-01

    Clustering high dimensional data has become a challenge in data mining due to the curse of dimension-ality. To solve this problem, subspace clustering has been defined as an extension of traditional clustering that seeks to find clusters in subspaces spanned by different combinations of dimensions within a dataset. This paper presents a new subspace clustering algorithm that calcu-lates the local feature weights automatically in an EM-based clustering process. In the algorithm, the features are locally weighted by using a new unsupervised weight-ing method, as a means to minimize a proposed cluster-ing criterion that takes into account both the average intra-clusters compactness and the average inter-clusters separation for subspace clustering. For the purposes of capturing accurate subspace information, an additional outlier detection process is presented to identify the pos-sible local outliers of subspace clusters, and is embedded between the E-step and M-step of the algorithm. The method has been evaluated in clustering real-world gene expression data and high dimensional artificial data with outliers, and the experimental results have shown its effectiveness.

  14. A Novel Trajectory Clustering technique for selecting cluster heads in Wireless Sensor Networks

    CERN Document Server

    Munaga, Hazarath; Venkateswarlu, N B

    2011-01-01

    Wireless sensor networks (WSNs) suffers from the hot spot problem where the sensor nodes closest to the base station are need to relay more packet than the nodes farther away from the base station. Thus, lifetime of sensory network depends on these closest nodes. Clustering methods are used to extend the lifetime of a wireless sensor network. However, current clustering algorithms usually utilize two techniques; selecting cluster heads with more residual energy, and rotating cluster heads periodically to distribute the energy consumption among nodes in each cluster and lengthen the network lifetime. Most of the algorithms use random selection for selecting the cluster heads. Here, we propose a novel trajectory clustering technique for selecting the cluster heads in WSNs. Our algorithm selects the cluster heads based on traffic and rotates periodically. It provides the first trajectory based clustering technique for selecting the cluster heads and to extenuate the hot spot problem by prolonging the network lif...

  15. A Fault Tolerant Trajectory Clustering (FTTC) for selecting cluster heads inWireless Sensor Networks

    CERN Document Server

    Munaga, Hazarath; Venkateswarlu, N B

    2011-01-01

    Wireless sensor networks (WSNs) suffers from the hot spot problem where the sensor nodes closest to the base station are need to relay more packet than the nodes farther away from the base station. Thus, lifetime of sensory network depends on these closest nodes. Clustering methods are used to extend the lifetime of a wireless sensor network. However, current clustering algorithms usually utilize two techniques; selecting cluster heads with more residual energy, and rotating cluster heads periodically to distribute the energy consumption among nodes in each cluster and lengthen the network lifetime. Most of the algorithms use random selection for selecting the cluster heads. Here, we propose a Fault Tolerant Trajectory Clustering (FTTC) technique for selecting the cluster heads in WSNs. Our algorithm selects the cluster heads based on traffic and rotates periodically. It provides the first Fault Tolerant Trajectory based clustering technique for selecting the cluster heads and to extenuate the hot spot proble...

  16. The little-studied cluster Berkeley 90 - III. Cluster parameters

    Science.gov (United States)

    Marco, Amparo; Negueruela, Ignacio

    2017-02-01

    The open cluster Berkeley 90 is the home to one of the most massive binary systems in the Galaxy, LS III +46°11, formed by two identical, very massive stars (O3.5 If* + O3.5 If*), and a second early-O system (LS III +46°12 with an O4.5 IV((f)) component at least). Stars with spectral types earlier than O4 are very scarce in the Milky Way, with no more than 20 examples. The formation of such massive stars is still an open question today, and thus the study of the environments where the most massive stars are found can shed some light on this topic. To this aim, we determine the properties and characterize the population of Berkeley 90 using optical, near-infrared and WISE photometry and optical spectroscopy. This is the first determination of these parameters with accuracy. We find a distance of 3.5^{+0.5}_{-0.5} kpc and a maximum age of 3 Ma. The cluster mass is around 1000 M⊙ (perhaps reaching 1500 M⊙ if the surrounding population is added), and we do not detect candidate runaway stars in the area. There is a second population of young stars to the southeast of the cluster that may have formed at the same time or slightly later, with some evidence for low-activity ongoing star formation.

  17. Logistics Clusters. Delivering Value and Driving Growth

    Directory of Open Access Journals (Sweden)

    Zoltan Kato

    2014-02-01

    Full Text Available We live in a world where the exchange of goods, information and money is achieved through complex logistic processes. The questions that the author tries to answer in his book are: What is a logistics cluster? Where are these logistics clusters formed, and where are they located? What is the difference in dynamics of the logistics clusters compared to other clusters or industrial parks? What kind of jobs exist in logistics clusters, and why the logistics clusters should be promoted and supported by authorities? How good and how reliable are these jobs? What is the environmental impact of logistics clusters? What is the role of authorities in creating successful logistics clusters and what benefits can be expected from them?

  18. Frequent Pattern Mining Algorithms for Data Clustering

    DEFF Research Database (Denmark)

    Zimek, Arthur; Assent, Ira; Vreeken, Jilles

    2014-01-01

    that frequent pattern mining was at the cradle of subspace clustering—yet, it quickly developed into an independent research field. In this chapter, we discuss how frequent pattern mining algorithms have been extended and generalized towards the discovery of local clusters in high-dimensional data......Discovering clusters in subspaces, or subspace clustering and related clustering paradigms, is a research field where we find many frequent pattern mining related influences. In fact, as the first algorithms for subspace clustering were based on frequent pattern mining algorithms, it is fair to say....... In particular, we discuss several example algorithms for subspace clustering or projected clustering as well as point out recent research questions and open topics in this area relevant to researchers in either clustering or pattern mining...

  19. Kernel method-based fuzzy clustering algorithm

    Institute of Scientific and Technical Information of China (English)

    Wu Zhongdong; Gao Xinbo; Xie Weixin; Yu Jianping

    2005-01-01

    The fuzzy C-means clustering algorithm(FCM) to the fuzzy kernel C-means clustering algorithm(FKCM) to effectively perform cluster analysis on the diversiform structures are extended, such as non-hyperspherical data, data with noise, data with mixture of heterogeneous cluster prototypes, asymmetric data, etc. Based on the Mercer kernel, FKCM clustering algorithm is derived from FCM algorithm united with kernel method. The results of experiments with the synthetic and real data show that the FKCM clustering algorithm is universality and can effectively unsupervised analyze datasets with variform structures in contrast to FCM algorithm. It is can be imagined that kernel-based clustering algorithm is one of important research direction of fuzzy clustering analysis.

  20. The Sloan Nearby Cluster Weak Lensing Survey

    CERN Document Server

    Kubo, Jeffrey M; Hardin, Frances Mei; Kubik, Donna; Lawhorn, Kelsey; Lin, Huan; Nicklaus, Liana; Nelson, Dylan; Reis, Ribamar R R; Seo, Hee-Jong; Soares-Santos, Marcelle; Stebbins, Albert; Yunker, Tony

    2009-01-01

    We describe and present initial results of a weak lensing survey of nearby ($\\rm{z}\\lesssim0.1$) galaxy clusters in the Sloan Digital Sky Survey (SDSS). In this first study, galaxy clusters are selected from the SDSS spectroscopic galaxy cluster catalogs of \\citet{miller05} and \\citet{berlind06}. We report a total of seven individual low redshift cluster weak lensing measurements which include: A2048, A1767, A2244, A1066, A2199, and two clusters specifically identified with the C4 algorithm. Our program of weak lensing of nearby galaxy clusters in the SDSS will eventually reach $\\sim 200$ clusters, making it the largest weak lensing survey of individual galaxy clusters to date.

  1. Spatial clustering with Density-Ordered tree

    Science.gov (United States)

    Cheng, Qing; Lu, Xin; Liu, Zhong; Huang, Jincai; Cheng, Guangquan

    2016-10-01

    Clustering has emerged as an active research direction for knowledge discovery in spatial databases. Most spatial clustering methods become ineffective when inappropriate parameters are given or when datasets of diverse shapes and densities are provided. To address this issue, we propose a novel clustering method, called SCDOT (Spatial Clustering with Density-Ordered Tree). By projecting a dataset to a Density-Ordered Tree, SCDOT partitions the data into several relatively small sub-clusters with a box-plot method. A heuristic method is proposed to find the genuine clusters by repeatedly merging sub-clusters and an iteration strategy is utilized to automatically determine input parameters. Moreover, we also provide an innovative way to identify cluster center and noise. Extensive experiments on both synthetic and real-world datasets demonstrate the superior performance of SCDOT over the baseline methods.

  2. Networked MIMO with Clustered Linear Precoding

    CERN Document Server

    Zhang, Jun; Andrews, Jeffrey G; Ghosh, Arunabha; Heath, Robert W

    2008-01-01

    A clustered base transceiver station (BTS) coordination strategy is proposed for a large cellular MIMO network, which includes full intra-cluster coordination to enhance the sum rate and limited inter-cluster coordination to reduce interference for the cluster edge users. Multi-cell block diagonalization is used to coordinate the transmissions across multiple BTSs in the same cluster. To satisfy per-BTS power constraints, three combined precoder and power allocation algorithms are proposed with different performance and complexity tradeoffs. For inter-cluster coordination, the coordination area is chosen to balance fairness for edge users and the achievable sum rate. It is shown that a small cluster size (about 7 cells) is sufficient to obtain most of the sum rate benefits from clustered coordination while greatly relieving channel feedback requirement. Simulations show that the proposed coordination strategy efficiently reduces interference and provides a considerable sum rate gain for cellular MIMO networks...

  3. Cluster-like headache aura status

    NARCIS (Netherlands)

    Langedijk, M; van der Naalt, J; Luijckx, GJ; De Keyser, J

    2005-01-01

    We describe a patient with successive attacks (40 to 90 minutes) of cluster-like headache associated with aphasia, and contralateral hemihypesthesia and hemiplegia. The condition can best be described as cluster-like headache aura status.

  4. Discovery of eight lensing clusters of galaxies

    CERN Document Server

    Liang, S M; Han, J L; Jiang, Y Y

    2013-01-01

    Clusters of galaxies have a huge mass which can act as gravitational lenses. Galaxies behind clusters can be distorted to form arcs in images by the lenses. Herein a search was done for giant lensed arcs by galaxy clusters using the SDSS data. By visually inspecting SDSS images of newly identified clusters in the SDSS DR8 and Stripe 82 data, we discover 8 strong lensing clusters together with additional 3 probable and 6 possible cases. The lensed arcs show bluer colors than the member galaxies of clusters. The masses and optical luminosities of galaxy clusters interior to the arcs are calculated, and the mass-to-light ratios are found to be in the range of a few tens of M_Solar/L_Solar, consistent with the distribution of previously known lensing clusters.

  5. Star Cluster Dissolution in Arp 284

    CERN Document Server

    Peterson, Bradley W; Smith, Beverly J; Hancock, Mark

    2009-01-01

    We present results from a study of proto-globular cluster candidates in the interacting galaxy system Arp 284 (NGC 7714/5). Studies of the Antennae and M51 have suggested that the majority of these star clusters dissolve within 20 Myr due to mass loss. We obtain cluster colors using archival \\emph{HST} data, and estimate ages and extinctions for over 150 clusters using evolutionary synthesis models. We find that clusters in NGC 7714 are generally less than 20 Myr old, while the data in the bridge is too limited to allow good estimates for individual clusters. We also examine {H {\\sc ii}} region complexes with lower-resolution \\emph{GALEX} and ground-based H$\\alpha$ images. Several of these regions appear to be much older than the detected clusters within them, which may indicate the presence of an older, unresolved population of low mass or dispersed clusters.

  6. Fuzzy Clustering Using C-Means Method

    Directory of Open Access Journals (Sweden)

    Georgi Krastev

    2015-05-01

    Full Text Available The cluster analysis of fuzzy clustering according to the fuzzy c-means algorithm has been described in this paper: the problem about the fuzzy clustering has been discussed and the general formal concept of the problem of the fuzzy clustering analysis has been presented. The formulation of the problem has been specified and the algorithm for solving it has been described.

  7. Watching the Birth of Super Star Clusters

    CERN Document Server

    Turner, J L; Turner, Jean L.; Beck, Sara C.

    2003-01-01

    Subarcsecond infrared and radio observations yield important information about the formation of super star clusters from their surrounding gas. We discuss the general properties of ionized and molecular gas near young, forming SSCs, as illustrated by the prototypical young forming super star cluster nebula in the dwarf galaxy, NGC 5253. This super star cluster appears to have a gravitationally bound nebula. The lack of molecular gas suggests a very high star formation efficiency, consistent with the formation of a large, bound star cluster.

  8. Cluster Dynamics in a Circulating Fluidized Bed

    Energy Technology Data Exchange (ETDEWEB)

    Guenther, C.P.; Breault, R.W.

    2006-11-01

    A common hydrodynamic feature in industrial scale circulating fluidized beds is the presence of clusters. The continuous formation and destruction of clusters strongly influences particle hold-up, pressure drop, heat transfer at the wall, and mixing. In this paper fiber optic data is analyzed using discrete wavelet analysis to characterize the dynamic behavior of clusters. Five radial positions at three different axial locations under five different operating were analyzed using discrete wavelets. Results are summarized with respect to cluster size and frequency.

  9. Amine reactivity with charged sulfuric acid clusters

    OpenAIRE

    Bzdek, B. R.; D. P. Ridge; Johnston, M. V.

    2011-01-01

    The distribution of ionic species produced by electrospray of an ammonium sulfate solution in both positive and negative polarities is examined using Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). Positively-charged ammonium bisulfate cluster composition differs significantly from negatively-charged cluster composition. For positively-charged clusters all sulfuric acid is neutralized to bisulfate, whereas for negatively-charged clusters the degree of sulfuric acid neu...

  10. Amine reactivity with charged sulfuric acid clusters

    OpenAIRE

    Bzdek, B. R.; D. P. Ridge; Johnston, M. V.

    2011-01-01

    The distribution of charged species produced by electrospray of an ammonium sulfate solution in both positive and negative polarities is examined using Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). Positively-charged ammonium bisulfate cluster composition differs significantly from negatively-charged cluster composition. For positively-charged clusters all sulfuric acid is neutralized to bisulfate, whereas for negatively-charged clusters the degree of sulfuric acid n...

  11. Fast Clustering using MapReduce

    OpenAIRE

    Ene, Alina; Im, Sungjin; Moseley, Benjamin

    2011-01-01

    Clustering problems have numerous applications and are becoming more challenging as the size of the data increases. In this paper, we consider designing clustering algorithms that can be used in MapReduce, the most popular programming environment for processing large datasets. We focus on the practical and popular clustering problems, $k$-center and $k$-median. We develop fast clustering algorithms with constant factor approximation guarantees. From a theoretical perspective, we give the firs...

  12. Association of chemical constituents and pollution sources of ambient fine particulate air pollution and biomarkers of oxidative stress associated with atherosclerosis: A panel study among young adults in Beijing, China.

    Science.gov (United States)

    Wu, Shaowei; Yang, Di; Wei, Hongying; Wang, Bin; Huang, Jing; Li, Hongyu; Shima, Masayuki; Deng, Furong; Guo, Xinbiao

    2015-09-01

    Ambient particulate air pollution has been associated with increased oxidative stress and atherosclerosis, but the chemical constituents and pollution sources behind the association are unclear. We investigated the associations of various chemical constituents and pollution sources of ambient fine particles (PM2.5) with biomarkers of oxidative stress in a panel of 40 healthy university students. Study participants underwent repeated blood collections for 12 times before and after relocating from a suburban campus to an urban campus with high air pollution levels in Beijing, China. Air pollution data were obtained from central air-monitoring stations, and plasma levels of oxidized low-density lipoprotein (Ox-LDL) and soluble CD36 (sCD36) were determined in the laboratory (n=464). Linear mixed-effects models were used to estimate the changes in biomarkers in association with exposure variables. PM2.5 iron and nickel were positively associated with Ox-LDL (ppollution sources, PM2.5 from traffic emissions and coal combustion were suggestively and positively associated with Ox-LDL. Our findings suggest that a subset of metals in airborne particles may be the major air pollution components that contribute to the increased oxidative stress associated with atherosclerosis.

  13. The Design of Cluster Randomized Crossover Trials

    Science.gov (United States)

    Rietbergen, Charlotte; Moerbeek, Mirjam

    2011-01-01

    The inefficiency induced by between-cluster variation in cluster randomized (CR) trials can be reduced by implementing a crossover (CO) design. In a simple CO trial, each subject receives each treatment in random order. A powerful characteristic of this design is that each subject serves as its own control. In a CR CO trial, clusters of subjects…

  14. Optical response of small magnesium clusters

    DEFF Research Database (Denmark)

    Solov'yov, Ilia; Solov'yov, Andrey V.; Greiner, Walter

    2004-01-01

    We predict strong enhancement in the photoabsorption of small Mg clusters in the region of 4–5 eV due to the resonant excitation of the plasmon oscillations of cluster electrons. Photoabsorption spectra for neutral Mg clusters consisting of up to N = 11 atoms have been calculated using an ab init...

  15. On the Index of Cluster Validity

    Institute of Scientific and Technical Information of China (English)

    YUEShihong; LIPing; SONGZhihuan

    2005-01-01

    The index of cluster validity is very useful in cluster algorithm. The number of clusters to choose in any index of cluster validity is the most important parameter in the sense that other parameters of the cluster algorithm really have second effect. In this paper, an important theorem on the variance ratio of index of cluster validity is proven, which shows that the variance ratio is closely related to a characteristic scale in clustering process and linearly linear relation as the characteristic scale is varied. Likewise two basic principles for designing the indexes of clustering validity are presented. Based on these results and the divisibility of clusters in dataset, four new equations about the lower and upper bounds of real number of clusters are derived. Furthermore, facing the densityand grid-based clustering algorithms two new approaches for computing the indexes of cluster validity are proposed, and these approaches show some new and instructive design ways. Also, two experiments are used to verify the effectiveness of these approaches in this paper.

  16. The HST/ACS Coma Cluster Survey. IV. Intergalactic Globular Clusters and the Massive Globular Cluster System at the Core of the Coma Galaxy Cluster

    NARCIS (Netherlands)

    Peng, Eric W.; Ferguson, Henry C.; Goudfrooij, Paul; Hammer, Derek; Lucey, John R.; Marzke, Ronald O.; Puzia, Thomas H.; Carter, David; Balcells, Marc; Bridges, Terry; Chiboucas, Kristin; del Burgo, Carlos; Graham, Alister W.; Guzmán, Rafael; Hudson, Michael J.; Matković, Ana; Merritt, David; Miller, Bryan W.; Mouhcine, Mustapha; Phillipps, Steven; Sharples, Ray; Smith, Russell J.; Tully, Brent; Verdoes Kleijn, Gijs

    2011-01-01

    Intracluster stellar populations are a natural result of tidal interactions in galaxy clusters. Measuring these populations is difficult, but important for understanding the assembly of the most massive galaxies. The Coma cluster of galaxies is one of the nearest truly massive galaxy clusters and is

  17. The HST/ACS Coma Cluster Survey : IV. Intergalactic Globular Clusters and the Massive Globular Cluster System at the Core of the Coma Galaxy Cluster

    NARCIS (Netherlands)

    Peng, Eric W.; Ferguson, Henry C.; Goudfrooij, Paul; Hammer, Derek; Lucey, John R.; Marzke, Ronald O.; Puzia, Thomas H.; Carter, David; Balcells, Marc; Bridges, Terry; Chiboucas, Kristin; del Burgo, Carlos; Graham, Alister W.; Guzman, Rafael; Hudson, Michael J.; Matkovic, Ana; Merritt, David; Miller, Bryan W.; Mouhcine, Mustapha; Phillipps, Steven; Sharples, Ray; Smith, Russell J.; Tully, Brent; Kleijn, Gijs Verdoes

    2011-01-01

    Intracluster stellar populations are a natural result of tidal interactions in galaxy clusters. Measuring these populations is difficult, but important for understanding the assembly of the most massive galaxies. The Coma cluster of galaxies is one of the nearest truly massive galaxy clusters and is

  18. Galaxy clustering around nearby luminous quasars

    CERN Document Server

    Fisher, K B; Kirhakos, S; Schneider, D P; Fisher, Karl B; Bahcall, John N; Schneider, Donald P

    1996-01-01

    We examine the clustering of galaxies around a sample of 20 luminous low redshift (z 100 kpc). Our results reinforce the idea that low redshift quasars are located preferentially in groups of 10-20 galaxies rather than in rich clusters. We see no significant difference in the clustering amplitudes derived from radio-loud and radio-quiet subsamples.

  19. Clustering Millions of Faces by Identity.

    Science.gov (United States)

    Otto, Charles; Wang, Dayong; Jain, Anil

    2017-03-07

    Given a large collection of unlabeled face images, we address the problem of clustering faces into an unknown number of identities. This problem is of interest in social media, law enforcement, and other applications, where the number of faces can be of the order of hundreds of million, while the number of identities (clusters) can range from a few thousand to millions. To address the challenges of run-time complexity and cluster quality, we present an approximate Rank-Order clustering algorithm that performs better than popular clustering algorithms (k-Means and Spectral). Our experiments include clustering up to 123 million face images into over 10 million clusters. Clustering results are analyzed in terms of external (known face labels) and internal (unknown face labels) quality measures, and run-time. Our algorithm achieves an F-measure of 0:87 on the LFW benchmark (13K faces of 5; 749 individuals), which drops to 0:27 on the largest dataset considered (13K faces in LFW + 123M distractor images). Additionally, we show that frames in the YouTube benchmark can be clustered with an F-measure of 0:71. An internal per-cluster quality measure is developed to rank individual clusters for manual exploration of high quality clusters that are compact and isolated.

  20. Cosmology and cluster halo scaling relations

    NARCIS (Netherlands)

    Araya-Melo, Pablo A.; van de Weygaert, Rien; Jones, Bernard J. T.

    2009-01-01

    We explore the effects of dark matter and dark energy on the dynamical scaling properties of galaxy clusters. We investigate the cluster Faber-Jackson (FJ), Kormendy and Fundamental Plane (FP) relations between the mass, radius and velocity dispersion of cluster-sized haloes in cosmological N-body s

  1. A Survey of Grid Based Clustering Algorithms

    Directory of Open Access Journals (Sweden)

    MR ILANGO

    2010-08-01

    Full Text Available Cluster Analysis, an automatic process to find similar objects from a database, is a fundamental operation in data mining. A cluster is a collection of data objects that are similar to one another within the same cluster and are dissimilar to the objects in other clusters. Clustering techniques have been discussed extensively in SimilaritySearch, Segmentation, Statistics, Machine Learning, Trend Analysis, Pattern Recognition and Classification [1]. Clustering methods can be classified into i Partitioning methods ii Hierarchical methods iii Density-based methods iv Grid-based methods v Model-based methods. Grid based methods quantize the object space into a finite number of cells (hyper-rectangles and then perform the required operations on the quantized space. The main advantage of Grid based method is its fast processing time which depends on number of cells in each dimension in quantized space. In this research paper, we present some of the grid based methods such as CLIQUE (CLustering In QUEst [2], STING (STatistical INformation Grid [3], MAFIA (Merging of Adaptive Intervals Approach to Spatial Data Mining [4], Wave Cluster [5]and O-CLUSTER (Orthogonal partitioning CLUSTERing [6], as a survey andalso compare their effectiveness in clustering data objects. We also present some of the latest developments in Grid Based methods such as Axis Shifted Grid Clustering Algorithm [7] and Adaptive Mesh Refinement [Wei-Keng Liao etc] [8] to improve the processing time of objects.

  2. The Mass Function of Nearby Galaxy Clusters

    CERN Document Server

    Biviano, A; Giuricin, G; Mardirossian, F; Mezzetti, M

    1993-01-01

    We present the distribution of virial masses for nearby galaxy clusters, as obtained from a data-set of 75 clusters, each having at least 20 galaxy members with measured redshifts within 1 Abell radius. After having accounted for problems of incompleteness of the data-set, we fitted a power-law to the cluster mass distribution.

  3. A Continuous Clustering Method for Vector Fields

    NARCIS (Netherlands)

    Garcke, H.; Preußer, T.; Rumpf, M.; Telea, A.; Weikard, U.; Wijk, J. van

    2000-01-01

    A new method for the simplification of flow fields is presented. It is based on continuous clustering. A well-known physical clustering model, the Cahn Hillard model which describes phase separation, is modified to reflect the properties of the data to be visualized. Clusters are defined implicitly

  4. Graph coarsening and clustering on the GPU

    NARCIS (Netherlands)

    Fagginger Auer, B.O.; Bisseling, R.H.

    2013-01-01

    Agglomerative clustering is an effective greedy way to quickly generate graph clusterings of high modularity in a small amount of time. In an effort to use the power offered by multi-core CPU and GPU hardware to solve the clustering problem, we introduce a fine-grained sharedmemory parallel graph co

  5. Comparing Clusters and Supercomputers for Lattice QCD

    CERN Document Server

    Gottlieb, S

    2001-01-01

    Since the development of the Beowulf project to build a parallel computer from commodity PC components, there have been many such clusters built. The MILC QCD code has been run on a variety of clusters and supercomputers. Key design features are identified, and the cost effectiveness of clusters and supercomputers are compared.

  6. Entrepreneurial culture in innovative biotech clusters.

    NARCIS (Netherlands)

    Ruel, H.J.M.; Frolova, P.; Groen, A.J.

    2012-01-01

    This paper presents a study on the determinants of entrepreneurial culture in innovative biotech clusters. A literature review led to the identification of nine determinants. For the empirical study four clusters in Western Europe with a high entrepreneurial culture were selected. Cluster participan

  7. Nanosized metal clusters : Challenges and opportunities

    NARCIS (Netherlands)

    De Hosson, JTM; Palasantzas, G; Vystavel, T; Koch, S

    2004-01-01

    This article presents challenges and opportunities to control the microstructure in nanostructured coatings using a nanocluster source. The cluster size distribution is monodisperse and the kinetic energy of the clusters during deposition can be varied. Interestingly, the clusters are grown in extre

  8. Scalable Density-Based Subspace Clustering

    DEFF Research Database (Denmark)

    Müller, Emmanuel; Assent, Ira; Günnemann, Stephan;

    2011-01-01

    For knowledge discovery in high dimensional databases, subspace clustering detects clusters in arbitrary subspace projections. Scalability is a crucial issue, as the number of possible projections is exponential in the number of dimensions. We propose a scalable density-based subspace clustering ...

  9. Open Clusters and OB Associations: a Review

    Directory of Open Access Journals (Sweden)

    Anthony G. A. Brown

    2001-01-01

    Full Text Available In this review on open clusters and OB associations I discuss some recent developments to which Latin American astronomers have contributed. Subsequently, results from the Hipparcos mission concerning OB associations, the Hyades and other nearby open clusters will be discussed. I end with a brief discussion of current theories of star cluster formation and prospects for future research.

  10. Planetary systems in star clusters

    CERN Document Server

    Kouwenhoven, M B N; Cai, Maxwell Xu; Spurzem, Rainer

    2016-01-01

    Thousands of confirmed and candidate exoplanets have been identified in recent years. Consequently, theoretical research on the formation and dynamical evolution of planetary systems has seen a boost, and the processes of planet-planet scattering, secular evolution, and interaction between planets and gas/debris disks have been well-studied. Almost all of this work has focused on the formation and evolution of isolated planetary systems, and neglect the effect of external influences, such as the gravitational interaction with neighbouring stars. Most stars, however, form in clustered environments that either quickly disperse, or evolve into open clusters. Under these conditions, young planetary systems experience frequent close encounters with other stars, at least during the first 1-10 Myr, which affects planets orbiting at any period range, as well as their debris structures.

  11. Particle identification using clustering algorithms

    CERN Document Server

    Wirth, R; Löher, B; Savran, D; Silva, J; Pol, H Álvarez; Gil, D Cortina; Pietras, B; Bloch, T; Kröll, T; Nácher, E; Perea, Á; Tengblad, O; Bendel, M; Dierigl, M; Gernhäuser, R; Bleis, T Le; Winkel, M

    2013-01-01

    A method that uses fuzzy clustering algorithms to achieve particle identification based on pulse shape analysis is presented. The fuzzy c-means clustering algorithm is used to compute mean (principal) pulse shapes induced by different particle species in an automatic and unsupervised fashion from a mixed set of data. A discrimination amplitude is proposed using these principal pulse shapes to identify the originating particle species of a detector pulse. Since this method does not make any assumptions about the specific features of the pulse shapes, it is very generic and suitable for multiple types of detectors. The method is applied to discriminate between photon- and proton-induced signals in CsI(Tl) scintillator detectors and the results are compared to the well-known integration method.

  12. Clustering Coefficients in Multiplex Networks

    CERN Document Server

    Cozzo, Emanuele; De Domenico, Manlio; Solé, Albert; Arenas, Alex; Gómez, Sergio; Porter, Mason A; Moreno, Yamir

    2013-01-01

    Recent advances in the study of complex networked systems has highlighted that our interconnected world is made of networks that are coupled together through different layers that each stand for one type of interaction or system. Despite this situation, it is traditional to aggregate multiplex data into a single weighted network in order take advantage of existing tools. This is admittedly convenient, but it is also extremely problematic. In this paper, we generalize the concept of clustering coefficients for multiplex networks. We show how the layered structure of multiplex networks introduces a new degree of freedom that has a fundamental effect on transitivity. We compute our new multiplex clustering coefficients for several real multiplex networks and illustrate why generalizing monoplex concepts to multiplex networks must be done with great care.

  13. The detection of neutron clusters

    Energy Technology Data Exchange (ETDEWEB)

    Marques, F.M.; Labiche, M.; Orr, N.A.; Angelique, J.C. [Caen Univ., 14 (France). Lab. de Physique Corpusculaire] [and others

    2001-11-01

    A new approach to the production and detection of bound neutron clusters is presented. The technique is based on the breakup of beams of very neutron-rich nuclei and the subsequent detection of the recoiling proton in a liquid scintillator. The method has been tested in the breakup of {sup 11}Li, {sup 14}Be and {sup 15}B beams by a C target. Some 6 events were observed that exhibit the characteristics of a multi-neutron cluster liberated in the breakup of {sup 14}Be, most probably in the channel {sup 10}Be+{sup 4}n. The various backgrounds that may mimic such a signal are discussed in detail. (author)

  14. Ontology Partitioning: Clustering Based Approach

    Directory of Open Access Journals (Sweden)

    Soraya Setti Ahmed

    2015-05-01

    Full Text Available The semantic web goal is to share and integrate data across different domains and organizations. The knowledge representations of semantic data are made possible by ontology. As the usage of semantic web increases, construction of the semantic web ontologies is also increased. Moreover, due to the monolithic nature of the ontology various semantic web operations like query answering, data sharing, data matching, data reuse and data integration become more complicated as the size of ontology increases. Partitioning the ontology is the key solution to handle this scalability issue. In this work, we propose a revision and an enhancement of K-means clustering algorithm based on a new semantic similarity measure for partitioning given ontology into high quality modules. The results show that our approach produces meaningful clusters than the traditional algorithm of K-means.

  15. Surface decorated platinum carbonyl clusters

    Science.gov (United States)

    Ciabatti, Iacopo; Femoni, Cristina; Iapalucci, Maria Carmela; Longoni, Giuliano; Zacchini, Stefano; Zarra, Salvatore

    2012-06-01

    Four molecular Pt-carbonyl clusters decorated by Cd-Br fragments, i.e., [Pt13(CO)12{Cd5(μ-Br)5Br2(dmf)3}2]2- (1), [Pt19(CO)17{Cd5(μ-Br)5Br3(Me2CO)2}{Cd5(μ-Br)5Br(Me2CO)4}]2- (2), [H2Pt26(CO)20(CdBr)12]8- (3) and [H4Pt26(CO)20(CdBr)12(PtBr)x]6- (4) (x = 0-2), have been obtained from the reactions between [Pt3n(CO)6n]2- (n = 2-6) and CdBr2.H2O in dmf at 120 °C. The structures of these molecular clusters with diameters of 1.5-2 nm have been determined by X-ray crystallography. Both 1 and 2 are composed of icosahedral or bis-icosahedral Pt-CO cores decorated on the surface by Cd-Br motifs, whereas 3 and 4 display a cubic close packed Pt26Cd12 metal frame decorated by CO and Br ligands. An oversimplified and unifying approach to interpret the electron count of these surface decorated platinum carbonyl clusters is suggested, and extended to other low-valent organometallic clusters and Au-thiolate nanoclusters.Four molecular Pt-carbonyl clusters decorated by Cd-Br fragments, i.e., [Pt13(CO)12{Cd5(μ-Br)5Br2(dmf)3}2]2- (1), [Pt19(CO)17{Cd5(μ-Br)5Br3(Me2CO)2}{Cd5(μ-Br)5Br(Me2CO)4}]2- (2), [H2Pt26(CO)20(CdBr)12]8- (3) and [H4Pt26(CO)20(CdBr)12(PtBr)x]6- (4) (x = 0-2), have been obtained from the reactions between [Pt3n(CO)6n]2- (n = 2-6) and CdBr2.H2O in dmf at 120 °C. The structures of these molecular clusters with diameters of 1.5-2 nm have been determined by X-ray crystallography. Both 1 and 2 are composed of icosahedral or bis-icosahedral Pt-CO cores decorated on the surface by Cd-Br motifs, whereas 3 and 4 display a cubic close packed Pt26Cd12 metal frame decorated by CO and Br ligands. An oversimplified and unifying approach to interpret the electron count of these surface decorated platinum carbonyl clusters is suggested, and extended to other low-valent organometallic clusters and Au-thiolate nanoclusters. CCDC 867747 and 867748. For crystallographic data in CIF or other electronic format see DOI: 10.1039/c2nr30400g

  16. Galaxy formation through hierarchical clustering

    Science.gov (United States)

    White, Simon D. M.; Frenk, Carlos S.

    1991-01-01

    Analytic methods for studying the formation of galaxies by gas condensation within massive dark halos are presented. The present scheme applies to cosmogonies where structure grows through hierarchical clustering of a mixture of gas and dissipationless dark matter. The simplest models consistent with the current understanding of N-body work on dissipationless clustering, and that of numerical and analytic work on gas evolution and cooling are adopted. Standard models for the evolution of the stellar population are also employed, and new models for the way star formation heats and enriches the surrounding gas are constructed. Detailed results are presented for a cold dark matter universe with Omega = 1 and H(0) = 50 km/s/Mpc, but the present methods are applicable to other models. The present luminosity functions contain significantly more faint galaxies than are observed.

  17. Tuning Properties in Silver Clusters

    KAUST Repository

    Joshi, Chakra Prasad

    2015-07-09

    The properties of Ag nanoclusters are not as well understood as those of their more precious Au cousins. However, a recent surge in the exploration of strategies to tune the physicochemical characteristics of Ag clusters addresses this imbalance, leading to new insights into their optical, luminescence, crystal habit, metal-core, ligand-shell and environmental properties. In this Perspective, we provide an overview of the latest strategies along with a brief introduction of the theoretical framework necessary to understand the properties of silver nanoclusters and the basis for their tuning. The advances in cluster research and the future prospects presented in this Perspective will eventually guide the next large systematic study of nanoclusters, resulting in a single collection of data similar to the periodic table of elements.

  18. Predicted halflives for cluster radioactivities

    Science.gov (United States)

    Poenaru, D. N.; Greiner, W.; Ivascu, M.

    1989-10-01

    The main results of the analytical superasymmetric fission model, describing in a unified manner cluster radioactivities, alpha-decay and cold fission processes, are briefly reviewed. Predicted halflives for 14C, 24, 25, 26Ne, 28, 30Mg and 32Si radioactivities in the range 10 11-10 26 s and the corresponding branching ratios relative to α-decay 10 -16 - 10 -9 have been experimentally confirmed within 1.5 orders of magnitude.

  19. Hierarchical Clustering and Active Galaxies

    CERN Document Server

    Hatziminaoglou, E; Manrique, A

    2000-01-01

    The growth of Super Massive Black Holes and the parallel development of activity in galactic nuclei are implemented in an analytic code of hierarchical clustering. The evolution of the luminosity function of quasars and AGN will be computed with special attention paid to the connection between quasars and Seyfert galaxies. One of the major interests of the model is the parallel study of quasar formation and evolution and the History of Star Formation.

  20. Intuitionistic fuzzy aggregation and clustering

    CERN Document Server

    Xu, Zeshui

    2012-01-01

    This book offers a systematic introduction to the clustering algorithms for intuitionistic fuzzy values, the latest research results in intuitionistic fuzzy aggregation techniques, the extended results in interval-valued intuitionistic fuzzy environments, and their applications in multi-attribute decision making, such as supply chain management, military system performance evaluation, project management, venture capital, information system selection, building materials classification, and operational plan assessment, etc.

  1. Applications of Cluster Analysis to the Creation of Perfectionism Profiles: A Comparison of two Clustering Approaches

    Directory of Open Access Journals (Sweden)

    Jocelyn H Bolin

    2014-04-01

    Full Text Available Although traditional clustering methods (e.g., K-means have been shown to be useful in the social sciences it is often difficult for such methods to handle situations where clusters in the population overlap or are ambiguous. Fuzzy clustering, a method already recognized in many disciplines, provides a more flexible alternative to these traditional clustering methods. Fuzzy clustering differs from other traditional clustering methods in that it allows for a case to belong to multiple clusters simultaneously. Unfortunately, fuzzy clustering techniques remain relatively unused in the social and behavioral sciences. The purpose of this paper is to introduce fuzzy clustering to these audiences who are currently relatively unfamiliar with the technique. In order to demonstrate the advantages associated with this method, cluster solutions of a common perfectionism measure were created using both fuzzy clustering and K-means clustering, and the results compared. Results of these analyses reveal that different cluster solutions are found by the two methods, and the similarity between the different clustering solutions depends on the amount of cluster overlap allowed for in fuzzy clustering.

  2. When galaxy clusters collide : the impact of merger shocks on cluster gas and galaxy evolution

    NARCIS (Netherlands)

    Stroe, Andra

    2015-01-01

    Galaxy clusters mainly grow through mergers with other clusters and groups. Major mergers give rise to cluster-wide traveling shocks, which can be detected at radio wavelengths as relics: elongated, diffuse synchrotron emitting areas located at the periphery of merging clusters. The 'Sausage' cluste

  3. Niching method using clustering crowding

    Institute of Scientific and Technical Information of China (English)

    GUO Guan-qi; GUI Wei-hua; WU Min; YU Shou-yi

    2005-01-01

    This study analyzes drift phenomena of deterministic crowding and probabilistic crowding by using equivalence class model and expectation proportion equations. It is proved that the replacement errors of deterministic crowding cause the population converging to a single individual, thus resulting in premature stagnation or losing optional optima. And probabilistic crowding can maintain equilibrium multiple subpopulations as the population size is adequate large. An improved niching method using clustering crowding is proposed. By analyzing topology of fitness landscape using hill valley function and extending the search space for similarity analysis, clustering crowding determines the locality of search space more accurately, thus greatly decreasing replacement errors of crowding. The integration of deterministic and probabilistic replacement increases the capacity of both parallel local hill climbing and maintaining multiple subpopulations. The experimental results optimizing various multimodal functions show that,the performances of clustering crowding, such as the number of effective peaks maintained, average peak ratio and global optimum ratio are uniformly superior to those of the evolutionary algorithms using fitness sharing, simple deterministic crowding and probabilistic crowding.

  4. Density profiles of LCDM clusters

    CERN Document Server

    Tasitsiomi, A; Gottlöber, S; Klypin, A A; Tasitsiomi, Argyro; Kravtsov, Andrey V.; Gottloeber, Stefan; Klypin, Anatoly A.

    2004-01-01

    We analyze the mass accretion histories (MAHs) and density profiles of cluster- size halos with virial masses of 0.6-2.5x10^14/h Msun in a flat LCDM cosmology. In agreement with previous studies,we find that the concentration of the density distribution is tightly correlated with the halo's MAH and its formation redshift.During the period of fast mass growth the concentration remains approximately constant and low c_v~3-4,while during the slow accretion stages it increases with decreasing redshift as c_v~(1+z)^-1.We consider fits of three widely discussed analytic density profiles to the simulated clusters focusing on the most relaxed inner regions.We find that there is no unique best fit analytic profile for all the systems.If,however,a cluster is best fit by a particular analytic profile at z=0,the same is usually true at earlier epochs out to z~1-2.The local logarithmic slope of the density profiles at 3% of the virial radius ranges from -1.2 to -2.0,a remarkable diversity for the relatively narrow mass ra...

  5. Galaxy Evolution in Rich Clusters

    Science.gov (United States)

    Schwarzkopf, U.; Hill, J. M.

    2000-12-01

    We present the first results of a study of the morphological and spectral evolution of galaxies within the dense cores of distant clusters at redshifts between z=0.4 and 1. The morphology, colors, concentration index, and asymmetry parameters of these cluster members are compared by using a combination of deep HST NICMOS and WFPC2 imaging, covering the rest-frame U and J bands. We also discuss the influence of dust obscuration on the derived measurements. Of particular interest is the morphology of galaxies at near-infrared wavelengths in rich clusters which show an excess of blue galaxies (Butcher-Oelmer effect), namely Abell 851 (z=0.4) and CL 1603+43 (z=0.92). We focus our study on optical/near-infrared measurements of galaxy asymmetry and central concentration, derived from a large number (>400) of objects detected within the core of Abell 851. The sensitivity and reliability of these parameters for galaxy classification and physical diagnostic purposes are tested. In conjunction with the use of recent source extraction software we are able to establish a fast, robust, and highly automated procedure of mapping the structural parameters of large galaxy samples. This work is supported by NASA, under contract NAS5-26555.

  6. RELICS: Reionization Lensing Cluster Survey

    Science.gov (United States)

    Coe, Dan A.; RELICS Team

    2017-01-01

    Hubble and Spitzer imaging programs observing galaxy cluster lenses have delivered some of the highest redshift galaxy candidates to date (z ~ 9 - 11, or 540 - 410 Myr after the Big Bang). These magnified galaxies are intrinsically faint, and thus more representative of the sources believed to be primarily responsible for reionization. Magnified galaxies are also observed brightly enough to be prime targets for detailed follow-up study with current and future observatories, including JWST. Building on the successes of CLASH and the Frontier Fields, we have begun RELICS, the Reionization Lensing Cluster Survey. By observing 41 massive clusters for the first time at infrared wavelengths, RELICS will deliver more of the best and brightest high-redshift candidates to the community in time for the November 2017 JWST GO Cycle 1 call for proposals. I will present our early results. I will also discuss prospects for JWST to follow-up known candidates and discover new galaxies at even higher redshifts (z > 11). The discovery efficiency gains from lensing will be even more pronounced at z > 11 if luminosity function faint end slopes are steeper than alpha ~ -2, as suggested by current models and observational extrapolations.

  7. Cluster Membership Probability: Polarimetric Approach

    CERN Document Server

    Medhi, Biman J

    2013-01-01

    Interstellar polarimetric data of the six open clusters Hogg 15, NGC 6611, NGC 5606, NGC 6231, NGC 5749 and NGC 6250 have been used to estimate the membership probability for the stars within them. For proper-motion member stars, the membership probability estimated using the polarimetric data is in good agreement with the proper-motion cluster membership probability. However, for proper-motion non-member stars, the membership probability estimated by the polarimetric method is in total disagreement with the proper-motion cluster membership probability. The inconsistencies in the determined memberships may be because of the fundamental differences between the two methods of determination: one is based on stellar proper-motion in space and the other is based on selective extinction of the stellar output by the asymmetric aligned dust grains present in the interstellar medium. The results and analysis suggest that the scatter of the Stokes vectors q(%) and u(%) for the proper-motion member stars depends on the ...

  8. Hot Outflows in Galaxy Clusters

    CERN Document Server

    Kirkpatrick, C C

    2015-01-01

    The gas-phase metallicity distribution has been analyzed for the hot atmospheres of 29 galaxy clusters using {\\it Chandra X-ray Observatory} observations. All host brightest cluster galaxies (BCGs) with X-ray cavity systems produced by radio AGN. We find high elemental abundances projected preferentially along the cavities of 16 clusters. The metal-rich plasma was apparently lifted out of the BCGs with the rising X-ray cavities (bubbles) to altitudes between twenty and several hundred kiloparsecs. A relationship between the maximum projected altitude of the uplifted gas (the "iron radius") and jet power is found with the form $R_{\\rm Fe} \\propto P_{\\rm jet}^{0.45}$. The estimated outflow rates are typically tens of solar masses per year but exceed $100 ~\\rm M_\\odot ~yr^{-1}$ in the most powerful AGN. The outflow rates are 10% to 20% of the cooling rates, and thus alone are unable to offset a cooling inflow. Nevertheless, hot outflows effectively redistribute the cooling gas and may play a significant role at ...

  9. A GMBCG galaxy cluster catalog of 55,880 rich clusters from SDSS DR7

    Energy Technology Data Exchange (ETDEWEB)

    Hao, Jiangang; McKay, Timothy A.; Koester, Benjamin P.; Rykoff, Eli S.; Rozo, Eduardo; Annis, James; Wechsler, Risa H.; Evrard, August; Siegel, Seth R.; Becker, Matthew; Busha, Michael; /Fermilab /Michigan U. /Chicago U., Astron. Astrophys. Ctr. /UC, Santa Barbara /KICP, Chicago /KIPAC, Menlo Park /SLAC /Caltech /Brookhaven

    2010-08-01

    We present a large catalog of optically selected galaxy clusters from the application of a new Gaussian Mixture Brightest Cluster Galaxy (GMBCG) algorithm to SDSS Data Release 7 data. The algorithm detects clusters by identifying the red sequence plus Brightest Cluster Galaxy (BCG) feature, which is unique for galaxy clusters and does not exist among field galaxies. Red sequence clustering in color space is detected using an Error Corrected Gaussian Mixture Model. We run GMBCG on 8240 square degrees of photometric data from SDSS DR7 to assemble the largest ever optical galaxy cluster catalog, consisting of over 55,000 rich clusters across the redshift range from 0.1 < z < 0.55. We present Monte Carlo tests of completeness and purity and perform cross-matching with X-ray clusters and with the maxBCG sample at low redshift. These tests indicate high completeness and purity across the full redshift range for clusters with 15 or more members.

  10. A GMBCG Galaxy Cluster Catalog of 55,424 Rich Clusters from SDSS DR7

    Energy Technology Data Exchange (ETDEWEB)

    Hao, Jiangang; /Fermilab; McKay, Timothy A.; /Michigan U.; Koester, Benjamin P.; /Chicago U.; Rykoff, Eli S.; /UC, Santa Barbara /LBL, Berkeley; Rozo, Eduardo; /Chicago U.; Annis, James; /Fermilab; Wechsler, Risa H.; /SLAC; Evrard, August; /Michigan U.; Siegel, Seth R.; /Michigan U.; Becker, Matthew; /Chicago U.; Busha, Michael; /SLAC; Gerdes, David; /Michigan U.; Johnston, David E.; /Fermilab; Sheldon, Erin; /Brookhaven

    2011-08-22

    We present a large catalog of optically selected galaxy clusters from the application of a new Gaussian Mixture Brightest Cluster Galaxy (GMBCG) algorithm to SDSS Data Release 7 data. The algorithm detects clusters by identifying the red sequence plus Brightest Cluster Galaxy (BCG) feature, which is unique for galaxy clusters and does not exist among field galaxies. Red sequence clustering in color space is detected using an Error Corrected Gaussian Mixture Model. We run GMBCG on 8240 square degrees of photometric data from SDSS DR7 to assemble the largest ever optical galaxy cluster catalog, consisting of over 55,000 rich clusters across the redshift range from 0.1 < z < 0.55. We present Monte Carlo tests of completeness and purity and perform cross-matching with X-ray clusters and with the maxBCG sample at low redshift. These tests indicate high completeness and purity across the full redshift range for clusters with 15 or more members.

  11. Cluster-viz: A Tractography QC Tool

    Directory of Open Access Journals (Sweden)

    Kesshi Jordan

    2017-02-01

    Full Text Available Cluster-viz is a web application that provides a platform for cluster-based interactive quality-control of tractography algorithm outputs. This tool facilitates the creation of white matter fascicle models by employing a cluster-based approach to allow the user to select streamline bundles for inclusion/exclusion in the final fascicle model. This project was started at the 2016 Neurohackweek and BrainHack events and is still under development. We welcome contributions to the Cluster-viz github repository (https://github.com/kesshijordan/Cluster-viz.

  12. AMiBA, XMM, and Cluster Surveys

    CERN Document Server

    Liang, H

    2001-01-01

    The Array for Microwave Background Anisotropy (AMiBA) is an interferometric array of 19 dishes co-mounted on a steerable platform and operating at 95GHz. One of the main scientific aims of AMiBA is to conduct cluster surveys using the Sunyaev-Zel'dovich (SZ) effect. Here we explore the potential of AMiBA as a tailor-made SZ instrument for the study of cluster physics and cosmology via cluster surveys out to the epoch of cluster formation. In particular, we explore the potential of combining AMiBA cluster surveys with the XMM-LSS (Large Scale Structure) survey.

  13. A Novel Research on Rough Clustering Algorithm

    Directory of Open Access Journals (Sweden)

    Tao Qu

    2014-01-01

    Full Text Available The aim of this study is focusing the issue of traditional clustering algorithm subjects to data space distribution influence, a novel clustering algortihm combined with rough set theory is employed to the normal clustering. The proposed rough clustering algorithm takes the condition attributes and decision attributes displayed in the information table as the consistency principle, meanwhile it takes the data supercubic and information entropy to realize data attribute shortcutting and discretizing. Based on above discussion, by applying assemble feature vector addition principle computiation only one scanning information table can realize clustering for the data subject. Experiments reveal that the proposed algorithm is efficient and feasible.

  14. Rearrangement of cluster structure during fission processes

    DEFF Research Database (Denmark)

    Lyalin, Andrey G.; Obolensky, Oleg I.; Solov'yov, Andrey V.

    2004-01-01

    Results of molecular dynamics simulations of fission reactions $Na_10^2+ -->Na_7^++ Na_3^+ and Na_18^2+--> 2Na_9^+ are presented. The dependence of the fission barriers on the isomer structure of the parent cluster is analysed. It is demonstrated that the energy necessary for removing homothetic...... groups of atoms from the parent cluster is largely independent of the isomer form of the parent cluster. The importance of rearrangement of the cluster structure during the fission process is elucidated. This rearrangement may include transition to another isomer state of the parent cluster before actual...

  15. ABOUT THE TYPES OF REGIONAL INNOVATION CLUSTERS

    Directory of Open Access Journals (Sweden)

    Aleksandr S. Voronov

    2016-01-01

    Full Text Available This article describes the main characteristics of innovation clusters, analyzed the develop-ment plans of the cluster areas of growth on the basis of innovation in the various subjects of the federation, it proposed the principle of clustering of the «nuclear» type, dened by problems in the functioning of specialized distributed clusters on the basis of the organi-zational and marketing innovations, proposed scheme for sustainable innovation develop-ment of specialized distributed cluster.

  16. Multilevel Techniques for the Clustering Problem

    Directory of Open Access Journals (Sweden)

    Noureddine Bouhmala

    2014-02-01

    Full Text Available Data Mining is concerned with the discovery of int eresting patterns and knowledge in data repositories. Cluster Analysis which belongs to the core methods of data mining is the process of discovering homogeneous groups called clusters. Given a data-set and some measure of similarity between data objects, the goal in most c lustering algorithms is maximizing both the homogeneity within each cluster and the heterogene ity between different clusters. In this work, two multilevel algorithms for the clustering problem are introduced. The multilevel paradigm suggests looking at the clustering proble m as a hierarchical optimization process going through different levels evolving from a coar se grain to fine grain strategy. The clustering problem is solved by first reducing the problem level by level to a coarser problem where an initial clustering is computed. The clustering of the coarser problem is mapped back level-by- level to obtain a better clustering of the original problem by refining the intermediate different clustering obtained at various levels. A benchmark using a number of data sets collected from a variety of domains is used to compare the effective ness of the hierarchical approach against its single-level counterpart.

  17. Hesitant fuzzy agglomerative hierarchical clustering algorithms

    Science.gov (United States)

    Zhang, Xiaolu; Xu, Zeshui

    2015-02-01

    Recently, hesitant fuzzy sets (HFSs) have been studied by many researchers as a powerful tool to describe and deal with uncertain data, but relatively, very few studies focus on the clustering analysis of HFSs. In this paper, we propose a novel hesitant fuzzy agglomerative hierarchical clustering algorithm for HFSs. The algorithm considers each of the given HFSs as a unique cluster in the first stage, and then compares each pair of the HFSs by utilising the weighted Hamming distance or the weighted Euclidean distance. The two clusters with smaller distance are jointed. The procedure is then repeated time and again until the desirable number of clusters is achieved. Moreover, we extend the algorithm to cluster the interval-valued hesitant fuzzy sets, and finally illustrate the effectiveness of our clustering algorithms by experimental results.

  18. XMM Newton Observations of Toothbrush Cluster

    Science.gov (United States)

    Kara, Sinancan; Nihal Ercan, Enise; De Plaa, Jelle; Mernier, Francois

    2016-07-01

    Galaxy clusters are the largest gravitationally-bound objects in the universe. The member galaxies are embedded in a hot X-ray emitting Intra-Cluster Medium (ICM) that has been enriched over time with metals produced by supernovae. In this presentation we show new results from XMM-Newton regarding the merging cluster 1RXSJ0603.3+4213. This cluster, also known as the Toothbrush cluster, shows a large toothbrush-shaped radio relic associated with a merger shock North of the cluster core. We show the distribution and the abundances of the metals in this merging cluster in relation to the merger shock. The results are derived from spatially resolved X-ray spectra from the EPIC instrument aboard XMM-Newton.

  19. Distance function selection in several clustering algorithrms

    Institute of Scientific and Technical Information of China (English)

    LU Yu

    2004-01-01

    Most clustering algorithms need to describe the similarity of objects by a predefined distance function. Three distance functions which are widely used in two traditional clustering algorithms k-means and hierarchical clustering were investigated.Both theoretical analysis and detailed experimental results were given. It is shown that a distance function greatly affects clustering results and can be used to detect the outlier of a cluster by the comparison of such different results and give the shape information of clusters. In practice situation, it is suggested to use different distance function separately, compare the clustering results and pick out the "swing points". And such points may leak out more information for data analysts.

  20. What Qualifies as a Cluster Theory?

    DEFF Research Database (Denmark)

    Maskell, Peter; Kebir, Leïla

    2005-01-01

    on the cluster concept. The paper considers approaches based on the idea of externalities (illustrated by the Marshall's work on `Industrial district'); oncompetitiveness issue (illustrated by Michael Porter's theory of cluster growth); on a territorial perspective (illustrated by the GREMI approach...... by identifying areas of particular ambiguity where further theoretical work is most urgently needed. Key words: Cluster, cluster theory, industrial district, innovative milieu, regional policyJEL Codes: L22, R10, R58......This paper investigates the theoretical backgrounds of the `cluster' and proposes a framework aiming at drawing the contour of cluster theory.The profundity of the notion of `clusters' is arguably conditional on the coherence of four fundamental issues associated with the concept: 1) the economic...