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Sample records for capillary-alveolar macromolecular leakage

  1. Increased cardiac index due to terbutaline treatment aggravates capillary-alveolar macromolecular leakage in oleic acid lung injury in dogs

    OpenAIRE

    Briot, Raphael; Bayat, Sam; Anglade, Daniel; Martiel, Jean-Louis; Grimbert, Francis

    2009-01-01

    Introduction We assessed the in vivo effects of terbutaline, a beta2-agonist assumed to reduce microvascular permeability in acute lung injury. Methods We used a recently developed broncho-alveolar lavage (BAL) technique to repeatedly measure (every 15 min. for 4 hours) the time-course of capillary-alveolar leakage of a macromolecule (fluorescein-labeled dextran) in 19 oleic acid (OA) lung injured dogs. BAL was performed in a closed lung sampling site, using a bronchoscope fitted with an infl...

  2. Curcumin suppresses gastric NF-κB activation and macromolecular leakage in Helicobacter pylori-infected rats

    Institute of Scientific and Technical Information of China (English)

    Kawiya; Sintara; Duangporn; Thong-Ngam; Suthiluk; Patumraj; Naruemon; Klaikeaw; Tanittha; Chatsuwan

    2010-01-01

    AIM:To investigate whether curcumin could attenuate nuclear factor(NF)-κB p65 expression and macromolecular leakage in the gastric mucosa of Helicobacter pylori(H.pylori)-infected rats.METHODS:Twenty-five male Sprague-Dawley rats were equally divided into five groups:control rats(Control),control rats supplemented with 600 mg/kg curcumin,H.pylori-infected rats(Hp),H.pylori-infected rats supplemented with 200 mg/kg curcumin(Hp + curIn H.pylori-infected groups,rats were inoculated with H.pylori suspension twi...

  3. Spectroscopic Approach to Capillary-Alveolar Membrane Damage Induced Acute Lung Injury

    Directory of Open Access Journals (Sweden)

    Jing Wang

    1999-01-01

    Full Text Available BACKGROUND: Acute (or adult respiratory distress syndrome (ARDS is often associated with a high mortality rate in the critical care population. The term acute lung injury (ALI, a primitive phase of ARDS, was introduced by the European and American consensus groups to provide early diagnoses of ARDS. The pathophysiological characterization of ALI/ARDS – an increased pulmonary capillary-alveolar membrane barrier permeability – is generally not included in current intensive care unit diagnosis criteria.

  4. Effects of babassu nut oil on ischemia/reperfusion-induced leukocyte adhesion and macromolecular leakage in the microcirculation: Observation in the hamster cheek pouch

    Directory of Open Access Journals (Sweden)

    Barbosa Maria do

    2012-11-01

    Full Text Available Abstract Background The babassu palm tree is native to Brazil and is most densely distributed in the Cocais region of the state of Maranhão, in northeastern Brazil. In addition to the industrial use of refined babassu oil, the milk, the unrefined oil and the nuts in natura are used by families from several communities of African descendants as one of the principal sources of food energy. The objective of this study was to evaluate the effects of babassu oil on microvascular permeability and leukocyte-endothelial interactions induced by ischemia/reperfusion using the hamster cheek pouch microcirculation as experimental model. Methods Twice a day for 14 days, male hamsters received unrefined babassu oil (0.02 ml/dose [BO-2 group], 0.06 ml/dose [BO-6 group], 0.18 ml/dose [BO-18 group] or mineral oil (0.18 ml/dose [MO group]. Observations were made in the cheek pouch and macromolecular permeability increase induced by ischemia/reperfusion (I/R or topical application of histamine, as well as leukocyte-endothelial interaction after I/R were evaluated. Results The mean value of I/R-induced microvascular leakage, determined during reperfusion, was significantly lower in the BO-6 and BO-18 groups than in the MO one (P Conclusions Our findings suggest that unrefined babassu oil reduced microvascular leakage and protected against histamine-induced effects in postcapillary venules and highlights that these almost unexploited nut and its oil might be secure sources of food energy.

  5. Molecular and macromolecular gastronomy

    Czech Academy of Sciences Publication Activity Database

    Raab, Miroslav

    Praha : Ústav makromolekulární chemie AV ČR, 2010. CL_1. ISBN 978-80-85009-62-0. [Workshop "Career in Polymers" /2./. 23.07.2010-24.07.2010, Praha] Institutional research plan: CEZ:AV0Z40500505 Keywords : molecular and macromolecular gastronomy Subject RIV: CD - Macromolecular Chemistry

  6. Macromolecular crystallization in microgravity

    Energy Technology Data Exchange (ETDEWEB)

    Snell, Edward H [Biophysics Group, NASA Marshall Space Flight Center, Code XD42, Huntsville, AL 35812 (United States); Helliwell, John R [Department of Chemistry, The University of Manchester, Manchester, M13 9PL (United Kingdom)

    2005-04-01

    Density difference fluid flows and sedimentation of growing crystals are greatly reduced when crystallization takes place in a reduced gravity environment. In the case of macromolecular crystallography a crystal of a biological macromolecule is used for diffraction experiments (x-ray or neutron) so as to determine the three-dimensional structure of the macromolecule. The better the internal order of the crystal then the greater the molecular structure detail that can be extracted. It is this structural information that enables an understanding of how the molecule functions. This knowledge is changing the biological and chemical sciences, with major potential in understanding disease pathologies. In this review, we examine the use of microgravity as an environment to grow macromolecular crystals. We describe the crystallization procedures used on the ground, how the resulting crystals are studied and the knowledge obtained from those crystals. We address the features desired in an ordered crystal and the techniques used to evaluate those features in detail. We then introduce the microgravity environment, the techniques to access that environment and the theory and evidence behind the use of microgravity for crystallization experiments. We describe how ground-based laboratory techniques have been adapted to microgravity flights and look at some of the methods used to analyse the resulting data. Several case studies illustrate the physical crystal quality improvements and the macromolecular structural advances. Finally, limitations and alternatives to microgravity and future directions for this research are covered. Macromolecular structural crystallography in general is a remarkable field where physics, biology, chemistry and mathematics meet to enable insight to the fundamentals of life. As the reader will see, there is a great deal of physics involved when the microgravity environment is applied to crystallization, some of it known, and undoubtedly much yet to

  7. Teaching macromolecular modeling.

    OpenAIRE

    Harvey, S C; Tan, R K

    1992-01-01

    Training newcomers to the field of macromolecular modeling is as difficult as is training beginners in x-ray crystallography, nuclear magnetic resonance, or other methods in structural biology. In one or two lectures, the most that can be conveyed is a general sense of the relationship between modeling and other structural methods. If a full semester is available, then students can be taught how molecular structures are built, manipulated, refined, and analyzed on a computer. Here we describe...

  8. Microgravity and Macromolecular Crystallography

    Science.gov (United States)

    Kundrot, Craig E.; Judge, Russell A.; Pusey, Marc L.; Snell, Edward H.; Rose, M. Franklin (Technical Monitor)

    2000-01-01

    Macromolecular crystal growth has been seen as an ideal experiment to make use of the reduced acceleration environment provided by an orbiting spacecraft. The experiments are small, simply operated and have a high potential scientific and economic impact. In this review we examine the theoretical reasons why microgravity should be a beneficial environment for crystal growth and survey the history of experiments on the Space Shuttle Orbiter, on unmanned spacecraft, and on the Mir space station. Finally we outline the direction for optimizing the future use of orbiting platforms.

  9. Teaching macromolecular modeling.

    Science.gov (United States)

    Harvey, S C; Tan, R K

    1992-12-01

    Training newcomers to the field of macromolecular modeling is as difficult as is training beginners in x-ray crystallography, nuclear magnetic resonance, or other methods in structural biology. In one or two lectures, the most that can be conveyed is a general sense of the relationship between modeling and other structural methods. If a full semester is available, then students can be taught how molecular structures are built, manipulated, refined, and analyzed on a computer. Here we describe a one-semester modeling course that combines lectures, discussions, and a laboratory using a commercial modeling package. In the laboratory, students carry out prescribed exercises that are coordinated to the lectures, and they complete a term project on a modeling problem of their choice. The goal is to give students an understanding of what kinds of problems can be attacked by molecular modeling methods and which problems are beyond the current capabilities of those methods. PMID:1489919

  10. On Probability Leakage

    OpenAIRE

    Briggs, William M

    2012-01-01

    The probability leakage of model M with respect to evidence E is defined. Probability leakage is a kind of model error. It occurs when M implies that events $y$, which are impossible given E, have positive probability. Leakage does not imply model falsification. Models with probability leakage cannot be calibrated empirically. Regression models, which are ubiquitous in statistical practice, often evince probability leakage.

  11. Axioms for Information Leakage

    OpenAIRE

    Alvim, Mário S.; Chatzikokolakis, Konstantinos; McIver, Annabelle; Morgan, Carroll; Palamidessi, Catuscia; Smith, Geoffrey

    2016-01-01

    Quantitative information flow aims to assess and control the leakage of sensitive information by computer systems. A key insight in this area is that no single leakage measure is appropriate in all operational scenarios; as a result, many leakage measures have been proposed, with many different properties. To clarify this complex situation, this paper studies information leakage axiomatically, showing important dependencies among different axioms. It also establishes a completeness result abo...

  12. Data Mining of Macromolecular Structures.

    Science.gov (United States)

    van Beusekom, Bart; Perrakis, Anastassis; Joosten, Robbie P

    2016-01-01

    The use of macromolecular structures is widespread for a variety of applications, from teaching protein structure principles all the way to ligand optimization in drug development. Applying data mining techniques on these experimentally determined structures requires a highly uniform, standardized structural data source. The Protein Data Bank (PDB) has evolved over the years toward becoming the standard resource for macromolecular structures. However, the process selecting the data most suitable for specific applications is still very much based on personal preferences and understanding of the experimental techniques used to obtain these models. In this chapter, we will first explain the challenges with data standardization, annotation, and uniformity in the PDB entries determined by X-ray crystallography. We then discuss the specific effect that crystallographic data quality and model optimization methods have on structural models and how validation tools can be used to make informed choices. We also discuss specific advantages of using the PDB_REDO databank as a resource for structural data. Finally, we will provide guidelines on how to select the most suitable protein structure models for detailed analysis and how to select a set of structure models suitable for data mining. PMID:27115630

  13. Land-use Leakage

    Energy Technology Data Exchange (ETDEWEB)

    Calvin, Katherine V.; Edmonds, James A.; Clarke, Leon E.; Bond-Lamberty, Benjamin; Kim, Son H.; Wise, Marshall A.; Thomson, Allison M.; Kyle, G. Page

    2009-12-01

    Leakage occurs whenever actions to mitigate greenhouse gas emissions in one part of the world unleash countervailing forces elsewhere in the world so that reductions in global emissions are less than emissions mitigation in the mitigating region. While many researchers have examined the concept of industrial leakage, land-use policies can also result in leakage. We show that land-use leakage is potentially as large as or larger than industrial leakage. We identify two potential land-use leakage drivers, land-use policies and bioenergy. We distinguish between these two pathways and run numerical experiments for each. We also show that the land-use policy environment exerts a powerful influence on leakage and that under some policy designs leakage can be negative. International “offsets” are a potential mechanism to communicate emissions mitigation beyond the borders of emissions mitigating regions, but in a stabilization regime designed to limit radiative forcing to 3.7 2/m2, this also implies greater emissions mitigation commitments on the part of mitigating regions.

  14. Macromolecular mimicry of nucleic acid and protein

    DEFF Research Database (Denmark)

    Nautrup Pedersen, Gitte; Nyborg, Jens; Clark, Brian F

    1999-01-01

    of the concept of macromolecular mimicry. Macromolecular mimicry has further been proposed among initiation and release factors, thereby adding a new element to the description of protein synthesis in bacteria. Such mimicry has also been observed in other biological processes such as autoimmunity, DNA repair...

  15. Macromolecular crystallography research at Trombay

    International Nuclear Information System (INIS)

    Neutron diffraction studies of hydrogen positions in small molecules of biological interest at Trombay have provided valuable information that has been used in protein and enzyme structure model-building and in developing hydrogen bond potential functions. The new R-5 reactor is expected to provide higher neutron fluxes and also make possible small-angle neutron scattering studies of large biomolecules and bio-aggregates. In the last few years infrastructure facilities have also been established for macromolecular x-ray crystallography research. Meanwhile, the refinement of carbonic hydrases and lyysozyme structures have been carried out and interesting results obtained on protein dynamics and structure-function relationships. Some interesting presynaptic toxin phospholipases have also taken up for study. (author)

  16. Collagen macromolecular drug delivery systems

    International Nuclear Information System (INIS)

    The objective of this study was to examine collagen for use as a macromolecular drug delivery system by determining the mechanism of release through a matrix. Collagen membranes varying in porosity, crosslinking density, structure and crosslinker were fabricated. Collagen characterized by infrared spectroscopy and solution viscosity was determined to be pure and native. The collagen membranes were determined to possess native vs. non-native quaternary structure and porous vs. dense aggregate membranes by electron microscopy. Collagen monolithic devices containing a model macromolecule (inulin) were fabricated. In vitro release rates were found to be linear with respect to t1/2 and were affected by crosslinking density, crosslinker and structure. The biodegradation of the collagen matrix was also examined. In vivo biocompatibility, degradation and 14C-inulin release rates were evaluated subcutaneously in rats

  17. Model for Electromagnetic Information Leakage

    Directory of Open Access Journals (Sweden)

    Mao Jian

    2013-09-01

    Full Text Available Electromagnetic leakage will happen in working information equipments; it could lead to information leakage. In order to discover the nature of information in electromagnetic leakage, this paper combined electromagnetic theory with information theory as an innovative research method. It outlines a systematic model of electromagnetic information leakage, which theoretically describes the process of information leakage, intercept and reproduction based on electromagnetic radiation, and analyzes amount of leakage information with formulas.  

  18. Fractal Dimensions of Macromolecular Structures

    Science.gov (United States)

    Todoroff, Nickolay; Kunze, Jens; Schreuder, Herman; Hessler, Gerhard; Baringhaus, Karl-Heinz; Schneider, Gisbert

    2014-01-01

    Quantifying the properties of macromolecules is a prerequisite for understanding their roles in biochemical processes. One of the less-explored geometric features of macromolecules is molecular surface irregularity, or ‘roughness’, which can be measured in terms of fractal dimension (D). In this study, we demonstrate that surface roughness correlates with ligand binding potential. We quantified the surface roughnesses of biological macromolecules in a large-scale survey that revealed D values between 2.0 and 2.4. The results of our study imply that surface patches involved in molecular interactions, such as ligand-binding pockets and protein-protein interfaces, exhibit greater local fluctuations in their fractal dimensions than ‘inert’ surface areas. We expect approximately 22 % of a protein’s surface outside of the crystallographically known ligand binding sites to be ligandable. These findings provide a fresh perspective on macromolecular structure and have considerable implications for drug design as well as chemical and systems biology. PMID:26213587

  19. Macromolecular synthesis in algal cells

    International Nuclear Information System (INIS)

    The present paper is a review of our experimental results obtained previously on the macromolecular biosyntheses in the cells of blue-green alga Anacystis nidulans as a representative species of prokaryote, and also in those of three species of eukaryotic algae, i.e. Euglena gracilis strain Z, Chlamydomonas reinhardi, and Cyanidium caldarium. In these algal cells, the combined methods consisting of pulse-labelling using 32P, 3H- and 14C-labelled precursors for macromolecules, of their chasing and of the use of inhibitors which block specifically the syntheses of macromolecules such as proteins, RNA and DNA in living cells were very effectively applied for the analyses of the regulatory mechanism in biosyntheses of macromolecules and of the mode of their assembly into the cell structure, especially organelle constituents. Rased on the results obtained thus, the following conclusions are reached: (1) the metabolic pool for syntheses of macromolecules in the cells of prokaryotic blue-green alga is limited to the small extent and such activities couple largely with the photosynthetic mechanism; (2) 70 S ribosomes in the blue-green algal cells are assembled on the surface of thylakoid membranes widely distributed in their cytoplasm; and (3) the cells of eukaryotic unicellular algae used here have biochemical characters specific for already differentiated enzyme system involving in transcription and translation machineries as the same as in higher organisms, but the control mechanism concerning with such macromolecule syntheses are different among each species. (author)

  20. Quantifying macromolecular conformational transition pathways

    Science.gov (United States)

    Seyler, Sean; Kumar, Avishek; Thorpe, Michael; Beckstein, Oliver

    2015-03-01

    Diverse classes of proteins function through large-scale conformational changes that are challenging for computer simulations. A range of fast path-sampling techniques have been used to generate transitions, but it has been difficult to compare paths from (and assess the relative strengths of) different methods. We introduce a comprehensive method (pathway similarity analysis, PSA) for quantitatively characterizing and comparing macromolecular pathways. The Hausdorff and Fréchet metrics (known from computational geometry) are used to quantify the degree of similarity between polygonal curves in configuration space. A strength of PSA is its use of the full information available from the 3 N-dimensional configuration space trajectory without requiring additional specific knowledge about the system. We compare a sample of eleven different methods for the closed-to-open transitions of the apo enzyme adenylate kinase (AdK) and also apply PSA to an ensemble of 400 AdK trajectories produced by dynamic importance sampling MD and the Geometrical Pathways algorithm. We discuss the method's potential to enhance our understanding of transition path sampling methods, validate them, and help guide future research toward deeper physical insights into conformational transitions.

  1. Molecular Control of Macromolecular Properties

    Science.gov (United States)

    Holcombe, Thomas Wesley, III

    Molecular level control over macromolecules has been at the heart of human advancement, long before Hermann Staudinger coined the term Makromolekule. From the development of primitive pharmaceuticals to the advanced materials that sent Man into outer-space, We have been tinkering with God's paint since our inception. The work described herein primarily involves advances concerning poly-aromatic macromolecules for use in future electronic applications, particularly that of organic photovoltaics. There is a final chapter, however, that gives the reader a taste of how some molecular level changes can be directly visualized with modern microscopy techniques. Chapter 1 provides a very brief introduction to conjugated polymers and molecular level control over macromolecular properties. Chapters 2--4 introduces the concept of polymer substitution as a means by which to control and improve charge generation in organic photovoltaic devices. Chapters 5 and 6 show how these polymers can take on larger, defined structures, yet are still beholden to intrinsic molecular properties---such as regioregularity, a fancy word for the regularity of the position in which two aromatic rings are joined together. Chapter 7 re-examines the role of polymer substitution on photovoltaic performance, this time with an emphasis on homo-polymer packing rather than electron transfer at the donor/acceptor interface. Finally, Chapter 8 visualizes how controlling the environment about a single metal atom can lead directly to a cyclic polyolefin. Individually, these advances do not yield any breakthroughs noticeable to a general audience; collectively, they sit atop a mountain of human knowledge, waiting to provide a stepping stone for the next generation.

  2. Zero leakage sealings

    Science.gov (United States)

    Kotesovec, Bernhard; Steinrück, Herbert

    2010-11-01

    The piston rod of a reciprocating compressor is sealed with elastic cylindrical sealing elements. Across the sealings the pressure drops from the operating pressure to the ambient pressure. The lubrication gap between the elastic sealing and reciprocating piston rod is studied with the aim to find conditions of a leakage free sealing. The flow in the lubrication gap and the elastic deformation of the sealing are determined simultaneously. The net-flow during one cycle of the reciprocating piston rod is calculated. It turns out that maintaining zero leakage is very sensible. Indeed the outbound flow during out-stroke has to be equal the inbound flow during the in-stroke. By prescribing a special shape of the undeformed sealing zero leakage can be attained - at least theoretically for certain operating conditions. It turns out that temperature dependent material data and a model for cavitation is necessary. The model, its numerical implementation and results will be discussed.

  3. Roxby Downs water leakage

    International Nuclear Information System (INIS)

    The Environment, Resource and development Committee has been asked by Parliament to examine 'a massive leakage of water at Roxby Downs' and to make recommendations 'as to further action'. It has also been specifically asked to comment on 'the desirability of the Department of Mines and Energy having prime responsibility for environmental matters in relation to mining operations'. This report begins with a description of the Olympic Dam operations near Roxby Downs and with a brief overview of the regulations controlling those operations. The site of the leakage the Olympic Dam tailings retention system is then described in greater detail. Part 3 describes how the system was originally designed, modified and approved. It ends with a series of findings about the adequacy of the original design (including the monitoring systems built into it) and of the approvals process. Recommendations are then made about how future approvals should be handled. Part 4 of the report outlines how the tailings retention system was built and operated and how the massive leakage from it was detected and reported. Findings about the adequacy of the management of the system and about the initial reactions to the leakage are then made, together with recommendations designed to improve future management of the system. 25 refs., 15 figs

  4. The design of macromolecular crystallography diffraction experiments

    International Nuclear Information System (INIS)

    Thoughts about the decisions made in designing macromolecular X-ray crystallography experiments at synchrotron beamlines are presented. The measurement of X-ray diffraction data from macromolecular crystals for the purpose of structure determination is the convergence of two processes: the preparation of diffraction-quality crystal samples on the one hand and the construction and optimization of an X-ray beamline and end station on the other. Like sample preparation, a macromolecular crystallography beamline is geared to obtaining the best possible diffraction measurements from crystals provided by the synchrotron user. This paper describes the thoughts behind an experiment that fully exploits both the sample and the beamline and how these map into everyday decisions that users can and should make when visiting a beamline with their most precious crystals

  5. Effects of macromolecular crowding on genetic networks.

    Science.gov (United States)

    Morelli, Marco J; Allen, Rosalind J; Wolde, Pieter Rein ten

    2011-12-21

    The intracellular environment is crowded with proteins, DNA, and other macromolecules. Under physiological conditions, macromolecular crowding can alter both molecular diffusion and the equilibria of bimolecular reactions and therefore is likely to have a significant effect on the function of biochemical networks. We propose a simple way to model the effects of macromolecular crowding on biochemical networks via an appropriate scaling of bimolecular association and dissociation rates. We use this approach, in combination with kinetic Monte Carlo simulations, to analyze the effects of crowding on a constitutively expressed gene, a repressed gene, and a model for the bacteriophage λ genetic switch, in the presence and absence of nonspecific binding of transcription factors to genomic DNA. Our results show that the effects of crowding are mainly caused by the shift of association-dissociation equilibria rather than the slowing down of protein diffusion, and that macromolecular crowding can have relevant and counterintuitive effects on biochemical network performance. PMID:22208186

  6. New pharmaceutical applications for macromolecular binders.

    Science.gov (United States)

    Bertrand, Nicolas; Gauthier, Marc A; Bouvet, Céline; Moreau, Pierre; Petitjean, Anne; Leroux, Jean-Christophe; Leblond, Jeanne

    2011-10-30

    Macromolecular binders consist of polymers, dendrimers, and oligomers with binding properties for endogenous or exogenous substrates. This field, at the frontier of host/guest chemistry and pharmacology, has met a renewed interest in the past decade due to the clinical success of several sequestrants, like sevelamer hydrochloride (Renagel®) or sugammadex (Bridion®). In many instances, multivalent binding by the macromolecular drugs can modify the properties of the substrate, and may prevent it from reaching its site of action and/or trigger a biological response. From small (e.g., ions) to larger substrates (e.g., bacteria and cells), this review presents the state-of-the-art of macromolecular binders and provides detailed illustrative examples of recent developments bearing much promise for future pharmaceutical applications. PMID:21571017

  7. Leakage behind casing

    OpenAIRE

    Khandka, Rupak Kumar

    2007-01-01

    Achieving zonal isolation by cementing annulus space between casing and well bore is an important job in many oil wells. Gas leakage in the annulus has been recognised as a major completion problem in the oil well. A successful cement job results in complete zonal isolation on a permanent basis. To achieve these goals, various factors such as well security, casing centralization, effective mud removal, and gas migration must be considered in the design. The design of the cement must be such t...

  8. Determining the architectures of macromolecular assemblies

    NARCIS (Netherlands)

    Alber, Frank; Dokudovskaya, Svetlana; Veenhoff, Liesbeth M.; Zhang, Wenzhu; Kipper, Julia; Devos, Damien; Suprapto, Adisetyantari; Karni-Schmidt, Orit; Williams, Rosemary; Chait, Brian T.; Rout, Michael P.; Sali, Andrej

    2007-01-01

    To understand the workings of a living cell, we need to know the architectures of its macromolecular assemblies. Here we show how proteomic data can be used to determine such structures. The process involves the collection of sufficient and diverse high-quality data, translation of these data into s

  9. Leakage resilient password systems

    CERN Document Server

    Li, Yingjiu; Deng, Robert H

    2015-01-01

    This book investigates tradeoff between security and usability in designing leakage resilient password systems (LRP) and introduces two practical LRP systems named Cover Pad and ShadowKey. It demonstrates that existing LRP systems are subject to both brute force attacks and statistical attacks and that these attacks cannot be effectively mitigated without sacrificing the usability of LRP systems. Quantitative analysis proves that a secure LRP system in practical settings imposes a considerable amount of cognitive workload unless certain secure channels are involved. The book introduces a secur

  10. Growth and dissolution of macromolecular Markov chains

    CERN Document Server

    Gaspard, Pierre

    2016-01-01

    The kinetics and thermodynamics of free living copolymerization are studied for processes with rates depending on k monomeric units of the macromolecular chain behind the unit that is attached or detached. In this case, the sequence of monomeric units in the growing copolymer is a kth-order Markov chain. In the regime of steady growth, the statistical properties of the sequence are determined analytically in terms of the attachment and detachment rates. In this way, the mean growth velocity as well as the thermodynamic entropy production and the sequence disorder can be calculated systematically. These different properties are also investigated in the regime of depolymerization where the macromolecular chain is dissolved by the surrounding solution. In this regime, the entropy production is shown to satisfy Landauer's principle.

  11. Enhancement and simplification of macromolecular images.

    OpenAIRE

    Namba, K; Caspar, D L; Stubbs, G

    1988-01-01

    Computer graphics programs have been devised to display selected atomic features and to simplify images of complex macromolecular structures. By using boundary outlines, adjustment of size and shape of the molecular components, color coding, shading, and selective omission of obscuring detail, attention can be focused on specific interactions which determine higher levels of organization. A balanced color table has been constructed in which different hues have equal steps in brightness; this ...

  12. Stochastic dynamics of macromolecular-assembly networks.

    Science.gov (United States)

    Saiz, Leonor; Vilar, Jose

    2006-03-01

    The formation and regulation of macromolecular complexes provides the backbone of most cellular processes, including gene regulation and signal transduction. The inherent complexity of assembling macromolecular structures makes current computational methods strongly limited for understanding how the physical interactions between cellular components give rise to systemic properties of cells. Here we present a stochastic approach to study the dynamics of networks formed by macromolecular complexes in terms of the molecular interactions of their components [1]. Exploiting key thermodynamic concepts, this approach makes it possible to both estimate reaction rates and incorporate the resulting assembly dynamics into the stochastic kinetics of cellular networks. As prototype systems, we consider the lac operon and phage λ induction switches, which rely on the formation of DNA loops by proteins [2] and on the integration of these protein-DNA complexes into intracellular networks. This cross-scale approach offers an effective starting point to move forward from network diagrams, such as those of protein-protein and DNA-protein interaction networks, to the actual dynamics of cellular processes. [1] L. Saiz and J.M.G. Vilar, submitted (2005). [2] J.M.G. Vilar and L. Saiz, Current Opinion in Genetics & Development, 15, 136-144 (2005).

  13. Competitiveness and carbon leakages

    International Nuclear Information System (INIS)

    The authors discuss the implications of the Emission Trading Scheme (ETS) in terms of competitiveness and profitability for companies. As this scheme may induce a risk of 'carbon leakage', equilibrium must be found between usage cost increase due to this scheme and decisions of investments in less carbon-emitting technologies. As the identification of the impacted sectors is at the core of the negotiation about the 'Climate and Energy' package, the authors describe the Commission's proposition which comprises a first stage of identification of the impacted sectors and a second stage to take the results of international negotiations for an international agreement on the post-Copenhagen period. The authors comment the issues and the status of the European negotiations

  14. Multifamily Envelope Leakage Model

    Energy Technology Data Exchange (ETDEWEB)

    Faakye, Omari [Consortium for Advanced Residential Buildings, Norwalk, CT (United States); Griffiths, Dianne [Consortium for Advanced Residential Buildings, Norwalk, CT (United States)

    2015-05-08

    “The cost for blower testing is high, because it is labor intensive, and it may disrupt occupants in multiple units. This high cost and disruption deter program participants, and dissuade them from pursuing energy improvements that would trigger air leakage testing, such as improvements to the building envelope.” This statement found in a 2012 report by Heschong Mahone Group for several California interests emphasizes the importance of reducing the cost and complexity of blower testing in multifamily buildings. Energy efficiency opportunities are being bypassed. The cost of single blower testing is on the order of $300. The cost for guarded blower door testing—the more appropriate test for assessing energy savings opportunities—could easily be six times that, and that’s only if you have the equipment and simultaneous access to multiple apartments. Thus, the proper test is simply not performed. This research seeks to provide an algorithm for predicting the guarded blower door test result based upon a single, total blower door test.

  15. Duct Leakage Repeatability Testing

    Energy Technology Data Exchange (ETDEWEB)

    Walker, Iain [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Sherman, Max [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)

    2014-08-01

    The purpose of this report is to evaluate the repeatability of the three most significant measurement techniques for duct leakage using data from the literature and recently obtained field data. We will also briefly discuss the first two factors. The main question to be answered by this study is to determine if differences in the repeatability of these tests methods is sufficient to indicate that any of these methods is so poor that it should be excluded from consideration as an allowed procedure in codes and standards. The three duct leak measurement methods assessed in this report are the two duct pressurization methods that are commonly used by many practitioners and the DeltaQ technique. These are methods B, C and A, respectively of the ASTM E1554 standard. Although it would be useful to evaluate other duct leak test methods, this study focused on those test methods that are commonly used and are required in various test standards, such as BPI (2010), RESNET (2014), ASHRAE 62.2 (2013), California Title 24 (CEC 2012), DOE Weatherization and many other energy efficiency programs.

  16. Duct Leakage Repeatability Testing

    Energy Technology Data Exchange (ETDEWEB)

    Walker, Iain [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Sherman, Max [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)

    2014-01-01

    Duct leakage often needs to be measured to demonstrate compliance with requirements or to determine energy or Indoor Air Quality (IAQ) impacts. Testing is often done using standards such as ASTM E1554 (ASTM 2013) or California Title 24 (California Energy Commission 2013 & 2013b), but there are several choices of methods available within the accepted standards. Determining which method to use or not use requires an evaluation of those methods in the context of the particular needs. Three factors that are important considerations are the cost of the measurement, the accuracy of the measurement and the repeatability of the measurement. The purpose of this report is to evaluate the repeatability of the three most significant measurement techniques using data from the literature and recently obtained field data. We will also briefly discuss the first two factors. The main question to be answered by this study is to determine if differences in the repeatability of these tests methods is sufficient to indicate that any of these methods is so poor that it should be excluded from consideration as an allowed procedure in codes and standards.

  17. Celebrating macromolecular crystallography: A personal perspective

    Directory of Open Access Journals (Sweden)

    Abad-Zapatero, Celerino

    2015-04-01

    Full Text Available The twentieth century has seen an enormous advance in the knowledge of the atomic structures that surround us. The discovery of the first crystal structures of simple inorganic salts by the Braggs in 1914, using the diffraction of X-rays by crystals, provided the critical elements to unveil the atomic structure of matter. Subsequent developments in the field leading to macromolecular crystallography are presented with a personal perspective, related to the cultural milieu of Spain in the late 1950’s. The journey of discovery of the author, as he developed professionally, is interwoven with the expansion of macromolecular crystallography from the first proteins (myoglobin, hemoglobin to the ‘coming of age’ of the field in 1971 and the discoveries that followed, culminating in the determination of the structure of the ribosomes at the turn of the century. A perspective is presented exploring the future of the field and also a reflection about the future generations of Spanish scientists.El siglo XX ha sido testigo del increíble avance que ha experimentado el conocimiento de la estructura atómica de la materia que nos rodea. El descubrimiento de las primeras estructuras atómicas de sales inorgánicas por los Bragg en 1914, empleando difracción de rayos X con cristales, proporcionó los elementos clave para alcanzar tal conocimiento. Posteriores desarrollos en este campo, que condujeron a la cristalografía macromolecular, se presentan aquí desde una perspectiva personal, relacionada con el contexto cultural de la España de la década de los 50. La experiencia del descubrimiento científico, durante mi desarrollo profesional, se integra en el desarrollo de la cristalografía macromolecular, desde las primeras proteínas (míoglobina y hemoglobina, hasta su madurez en 1971 que, con los posteriores descubrimientos, culmina con la determinación del la estructura del ribosoma. Asimismo, se explora el futuro de esta disciplina y se

  18. Automated macromolecular crystal detection system and method

    Science.gov (United States)

    Christian, Allen T.; Segelke, Brent; Rupp, Bernard; Toppani, Dominique

    2007-06-05

    An automated macromolecular method and system for detecting crystals in two-dimensional images, such as light microscopy images obtained from an array of crystallization screens. Edges are detected from the images by identifying local maxima of a phase congruency-based function associated with each image. The detected edges are segmented into discrete line segments, which are subsequently geometrically evaluated with respect to each other to identify any crystal-like qualities such as, for example, parallel lines, facing each other, similarity in length, and relative proximity. And from the evaluation a determination is made as to whether crystals are present in each image.

  19. Macromolecular recognition in the Protein Data Bank

    International Nuclear Information System (INIS)

    X-ray structures in the PDB illustrate both the specific recognition of two polypeptide chains in protein–protein complexes and dimeric proteins and their nonspecific interaction at crystal contacts. Crystal structures deposited in the Protein Data Bank illustrate the diversity of biological macromolecular recognition: transient interactions in protein–protein and protein–DNA complexes and permanent assemblies in homodimeric proteins. The geometric and physical chemical properties of the macromolecular interfaces that may govern the stability and specificity of recognition are explored in complexes and homodimers compared with crystal-packing interactions. It is found that crystal-packing interfaces are usually much smaller; they bury fewer atoms and are less tightly packed than in specific assemblies. Standard-size interfaces burying 1200–2000 Å2 of protein surface occur in protease–inhibitor and antigen–antibody complexes that assemble with little or no conformation changes. Short-lived electron-transfer complexes have small interfaces; the larger size of the interfaces observed in complexes involved in signal transduction and homodimers correlates with the presence of conformation changes, often implicated in biological function. Results of the CAPRI (critical assessment of predicted interactions) blind prediction experiment show that docking algorithms efficiently and accurately predict the mode of assembly of proteins that do not change conformation when they associate. They perform less well in the presence of large conformation changes and the experiment stimulates the development of novel procedures that can handle such changes

  20. The role of macromolecular stability in desiccation tolerance.

    NARCIS (Netherlands)

    Wolkers, W.

    1998-01-01

    The work presented in this thesis concerns a study on the molecular interactions that play a role in the macromolecular stability of desiccation-tolerant higher plant organs. Fourier transform infrared microspectroscopy was used as the main experimental technique to assess macromolecular structures

  1. Panorama of ancient metazoan macromolecular complexes.

    Science.gov (United States)

    Wan, Cuihong; Borgeson, Blake; Phanse, Sadhna; Tu, Fan; Drew, Kevin; Clark, Greg; Xiong, Xuejian; Kagan, Olga; Kwan, Julian; Bezginov, Alexandr; Chessman, Kyle; Pal, Swati; Cromar, Graham; Papoulas, Ophelia; Ni, Zuyao; Boutz, Daniel R; Stoilova, Snejana; Havugimana, Pierre C; Guo, Xinghua; Malty, Ramy H; Sarov, Mihail; Greenblatt, Jack; Babu, Mohan; Derry, W Brent; Tillier, Elisabeth R; Wallingford, John B; Parkinson, John; Marcotte, Edward M; Emili, Andrew

    2015-09-17

    Macromolecular complexes are essential to conserved biological processes, but their prevalence across animals is unclear. By combining extensive biochemical fractionation with quantitative mass spectrometry, here we directly examined the composition of soluble multiprotein complexes among diverse metazoan models. Using an integrative approach, we generated a draft conservation map consisting of more than one million putative high-confidence co-complex interactions for species with fully sequenced genomes that encompasses functional modules present broadly across all extant animals. Clustering reveals a spectrum of conservation, ranging from ancient eukaryotic assemblies that have probably served cellular housekeeping roles for at least one billion years, ancestral complexes that have accrued contemporary components, and rarer metazoan innovations linked to multicellularity. We validated these projections by independent co-fractionation experiments in evolutionarily distant species, affinity purification and functional analyses. The comprehensiveness, centrality and modularity of these reconstructed interactomes reflect their fundamental mechanistic importance and adaptive value to animal cell systems. PMID:26344197

  2. Macromolecular diffractive imaging using imperfect crystals

    Science.gov (United States)

    Ayyer, Kartik; Yefanov, Oleksandr M.; Oberthür, Dominik; Roy-Chowdhury, Shatabdi; Galli, Lorenzo; Mariani, Valerio; Basu, Shibom; Coe, Jesse; Conrad, Chelsie E.; Fromme, Raimund; Schaffer, Alexander; Dörner, Katerina; James, Daniel; Kupitz, Christopher; Metz, Markus; Nelson, Garrett; Xavier, Paulraj Lourdu; Beyerlein, Kenneth R.; Schmidt, Marius; Sarrou, Iosifina; Spence, John C. H.; Weierstall, Uwe; White, Thomas A.; Yang, Jay-How; Zhao, Yun; Liang, Mengning; Aquila, Andrew; Hunter, Mark S.; Robinson, Joseph S.; Koglin, Jason E.; Boutet, Sébastien; Fromme, Petra; Barty, Anton; Chapman, Henry N.

    2016-02-01

    The three-dimensional structures of macromolecules and their complexes are mainly elucidated by X-ray protein crystallography. A major limitation of this method is access to high-quality crystals, which is necessary to ensure X-ray diffraction extends to sufficiently large scattering angles and hence yields information of sufficiently high resolution with which to solve the crystal structure. The observation that crystals with reduced unit-cell volumes and tighter macromolecular packing often produce higher-resolution Bragg peaks suggests that crystallographic resolution for some macromolecules may be limited not by their heterogeneity, but by a deviation of strict positional ordering of the crystalline lattice. Such displacements of molecules from the ideal lattice give rise to a continuous diffraction pattern that is equal to the incoherent sum of diffraction from rigid individual molecular complexes aligned along several discrete crystallographic orientations and that, consequently, contains more information than Bragg peaks alone. Although such continuous diffraction patterns have long been observed—and are of interest as a source of information about the dynamics of proteins—they have not been used for structure determination. Here we show for crystals of the integral membrane protein complex photosystem II that lattice disorder increases the information content and the resolution of the diffraction pattern well beyond the 4.5-ångström limit of measurable Bragg peaks, which allows us to phase the pattern directly. Using the molecular envelope conventionally determined at 4.5 ångströms as a constraint, we obtain a static image of the photosystem II dimer at a resolution of 3.5 ångströms. This result shows that continuous diffraction can be used to overcome what have long been supposed to be the resolution limits of macromolecular crystallography, using a method that exploits commonly encountered imperfect crystals and enables model-free phasing.

  3. Robust characterization of leakage errors

    Science.gov (United States)

    Wallman, Joel J.; Barnhill, Marie; Emerson, Joseph

    2016-04-01

    Leakage errors arise when the quantum state leaks out of some subspace of interest, for example, the two-level subspace of a multi-level system defining a computational ‘qubit’, the logical code space of a quantum error-correcting code, or a decoherence-free subspace. Leakage errors pose a distinct challenge to quantum control relative to the more well-studied decoherence errors and can be a limiting factor to achieving fault-tolerant quantum computation. Here we present a scalable and robust randomized benchmarking protocol for quickly estimating the leakage rate due to an arbitrary Markovian noise process on a larger system. We illustrate the reliability of the protocol through numerical simulations.

  4. Phylogenetic Diversity in the Macromolecular Composition of Microalgae

    Science.gov (United States)

    Finkel, Zoe V.; Follows, Mick J.; Liefer, Justin D.; Brown, Chris M.; Benner, Ina; Irwin, Andrew J.

    2016-01-01

    The elemental stoichiometry of microalgae reflects their underlying macromolecular composition and influences competitive interactions among species and their role in the food web and biogeochemistry. Here we provide a new estimate of the macromolecular composition of microalgae using a hierarchical Bayesian analysis of data compiled from the literature. The median macromolecular composition of nutrient-sufficient exponentially growing microalgae is 32.2% protein, 17.3% lipid, 15.0% carbohydrate, 17.3% ash, 5.7% RNA, 1.1% chlorophyll-a and 1.0% DNA as percent dry weight. Our analysis identifies significant phylogenetic differences in macromolecular composition undetected by previous studies due to small sample sizes and the large inherent variability in macromolecular pools. The phylogenetic differences in macromolecular composition lead to variations in carbon-to-nitrogen ratios that are consistent with independent observations. These phylogenetic differences in macromolecular and elemental composition reflect adaptations in cellular architecture and biochemistry; specifically in the cell wall, the light harvesting apparatus, and storage pools. PMID:27228080

  5. An upper limit for macromolecular crowding effects

    Directory of Open Access Journals (Sweden)

    Miklos Andrew C

    2011-05-01

    Full Text Available Abstract Background Solutions containing high macromolecule concentrations are predicted to affect a number of protein properties compared to those properties in dilute solution. In cells, these macromolecular crowders have a large range of sizes and can occupy 30% or more of the available volume. We chose to study the stability and ps-ns internal dynamics of a globular protein whose radius is ~2 nm when crowded by a synthetic microgel composed of poly(N-isopropylacrylamide-co-acrylic acid with particle radii of ~300 nm. Results Our studies revealed no change in protein rotational or ps-ns backbone dynamics and only mild (~0.5 kcal/mol at 37°C, pH 5.4 stabilization at a volume occupancy of 70%, which approaches the occupancy of closely packing spheres. The lack of change in rotational dynamics indicates the absence of strong crowder-protein interactions. Conclusions Our observations are explained by the large size discrepancy between the protein and crowders and by the internal structure of the microgels, which provide interstitial spaces and internal pores where the protein can exist in a dilute solution-like environment. In summary, microgels that interact weakly with proteins do not strongly influence protein dynamics or stability because these large microgels constitute an upper size limit on crowding effects.

  6. Miniaturized kappa goniometer for macromolecular crystallography

    International Nuclear Information System (INIS)

    A goniometer with kappa geometry has been designed and built specifically for macromolecular crystallography. The main feature is a miniaturized kappa stage made possible by the small weight of specimen and specimen holder. The design goal was to: 1) eliminate interference between stage and area detector for specimen-to-detector distances of 100 mm and more; 2) minimize the sphere of confusion on expectation of dealing with very small crystals at third generation sources; 3) minimize the solid angle of shadow and inaccessible positioning of the sample due to interference of the stage with other objects in the sample area; 4) achieve a rotation speed of 10 degree/s at 0.5% constancy and 0.4 s acceleration time for 0.05 s exposures of 0.2 degree fine slice frames every 2 seconds, and 5) to achieve precise synchronization between rotation angle and shutter opening and closing. The kappa stage is mounted on a commercial high precision rotary table, designed for use in both horizontal and vertical orientation. This table provides the high precision rotation for data acquisition. The required crisp response and constant speed is delivered by a high output direct drive DC-motor, controlled by a closed-loop controller using feedback from a precision angular encoder. The kappa- and phi-motions are used for sample positioning only and are driven by miniature DC-motors equipped with integral encoders.copyright 1997 American Institute of Physics

  7. Miniaturized kappa goniometer for macromolecular crystallography

    International Nuclear Information System (INIS)

    A goniometer with kappa geometry has been designed and built specifically for macromolecular crystallography. The main feature is a miniaturized kappa stage made possible by the small weight of specimen and specimen holder. The design goal was to: 1) eliminate interference between stage and area detector for specimen-to-detector distances of 100 mm and more; 2) minimize the sphere of confusion on expectation of dealing with very small crystals at third generation sources; 3) minimize the solid angle of shadow and inaccessible positioning of the sample due to interference of the stage with other objects in the sample area; 4) achieve a rotation speed of 10 degree/s at 0.5% constancy and 0.4 s acceleration time for 0.05 s exposures of 0.2 degree fine slice frames every 2 seconds, and 5) to achieve precise synchronization between rotation angle and shutter opening and closing. The kappa stage is mounted on a commercial high precision rotary table, designed for use in both horizontal and vertical orientation. This table provides the high precision rotation for data acquisition. The required crisp response and constant speed is delivered by a high output direct drive DC-motor, controlled by a closed-loop controller using feedback from a precision angular encoder. The kappa- and phi-motions are used for sample positioning only and are driven by miniature DC-motors equipped with integral encoders

  8. Macromolecular Crystal Growth by Means of Microfluidics

    Science.gov (United States)

    vanderWoerd, Mark; Ferree, Darren; Spearing, Scott; Monaco, Lisa; Molho, Josh; Spaid, Michael; Brasseur, Mike; Curreri, Peter A. (Technical Monitor)

    2002-01-01

    We have performed a feasibility study in which we show that chip-based, microfluidic (LabChip(TM)) technology is suitable for protein crystal growth. This technology allows for accurate and reliable dispensing and mixing of very small volumes while minimizing bubble formation in the crystallization mixture. The amount of (protein) solution remaining after completion of an experiment is minimal, which makes this technique efficient and attractive for use with proteins, which are difficult or expensive to obtain. The nature of LabChip(TM) technology renders it highly amenable to automation. Protein crystals obtained in our initial feasibility studies were of excellent quality as determined by X-ray diffraction. Subsequent to the feasibility study, we designed and produced the first LabChip(TM) device specifically for protein crystallization in batch mode. It can reliably dispense and mix from a range of solution constituents into two independent growth wells. We are currently testing this design to prove its efficacy for protein crystallization optimization experiments. In the near future we will expand our design to incorporate up to 10 growth wells per LabChip(TM) device. Upon completion, additional crystallization techniques such as vapor diffusion and liquid-liquid diffusion will be accommodated. Macromolecular crystallization using microfluidic technology is envisioned as a fully automated system, which will use the 'tele-science' concept of remote operation and will be developed into a research facility for the International Space Station as well as on the ground.

  9. Issues behind Competitiveness and Carbon Leakage

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2008-07-01

    This report explores the vulnerability of heavy industry to carbon leakage and competitiveness loss. It reviews the existing literature on competitiveness and carbon leakage under uneven climate policies. It also suggests a statistical method to track carbon leakage, and applies this methodology to Phase I of the EU emissions trading scheme, for various industrial activities: iron and steel, cement, aluminium and refineries. Finally, it reviews measures to mitigate carbon leakage, as discussed in Australia, Canada, Europe, New Zealand and the US.

  10. Scavengers in macromolecular crystallography. Do they help?

    International Nuclear Information System (INIS)

    Complete text of publication follows. Radiation damage continues to present a problem to macromolecular crystallographers using cryo-cooled protein crystals at synchrotrons where a linear decay in diffraction intensity is observed with increasing dose. Free radical scavengers and radioprotectants have been suggested as a possible means of reducing the rate of this damage. Early room temperature (RT) experiments seemed to show that styrene and PEG might have a positive effect on the dose tolerance of crystals, but the idea was not systematically pursued. We have previously reported that 0.5 M-1 M ascorbate incorporated by cocrystallisation was effective in quenching the disulphide breakage in lysozyme (HEWL) crystals during 100 K data collection. The screening of a large number of potential radioprotectants was then undertaken with an on-line microspectrophotometer using cystine and cysteine respectively to model protein disulphide bonds and thiol groups, and observe any quenching of the disulphide anion peak. Evidence for the potential of ascorbate as a radioprotectant was strengthened, and 1,4 benzoquinone, 2,2,6,6- tetramethyl-4-piperidone (TEMP) and reduced dithiothreitol also showed promise. In recent work to search for RT radiation damage mitigation strategies, three of these putative radioprotectants were tested. The results indicate that ascorbate and 1,4-benzoquinone are effective radioprotectants, whereas studies on TEMP were inconclusive. Ascorbate offered a 2x enhancement of crystal dose tolerance, whereas benzoquinone gave a >8x increase at the dose-rates used. The universally previously observed exponential form of the RT diffraction intensity decay was modified by the addition of scavengers to become linear as is observed at 100 K without scavengers present. The radiation damage mechanisms are elucidated by these results, which enable postulates to be made on the radical species causing damage at 100 K. Recent results using the electron scavenger

  11. 16 CFR 1507.5 - Pyrotechnic leakage.

    Science.gov (United States)

    2010-01-01

    ... 16 Commercial Practices 2 2010-01-01 2010-01-01 false Pyrotechnic leakage. 1507.5 Section 1507.5... FIREWORKS DEVICES § 1507.5 Pyrotechnic leakage. The pyrotechnic chamber in fireworks devices shall be sealed in a manner that prevents leakage of the pyrotechnic composition during shipping, handling,...

  12. Colic anastomotic leakage risk factors

    OpenAIRE

    Calin, MD; Bălălău, C; Popa, F; Voiculescu, S; Scăunașu, RV

    2013-01-01

    Abstract Background: Anastomotic leakage is a dreaded complication of colorectal surgery, as it greatly increases the morbidity, mortality and has been associated with augmented local recurrence and diminished survival. The frequency of this complication is high in emergency colorectal surgery, especially for bowel occlusion, (13% for emergency vs. 4% in elective), due to visceral distension and, therefore, an incongruence in the size of each of the stumps, combined with the lack of mechanica...

  13. Practical Leakage-Resilient Symmetric Cryptography

    DEFF Research Database (Denmark)

    Faust, Sebastian; Pietrzak, Krzysztof; Schipper, Joachim

    2012-01-01

    construction may already suffice to protect against realistic side-channel attacks. In this paper, we show that indeed for simpler constructions leakage-resilience can be obtained when we aim for relaxed security notions where the leakage-functions and/or the inputs to the primitive are chosen non......Leakage resilient cryptography attempts to incorporate side-channel leakage into the black-box security model and designs cryptographic schemes that are provably secure within it. Informally, a scheme is leakage-resilient if it remains secure even if an adversary learns a bounded amount of...

  14. Complex Macromolecular Architectures by Living Cationic Polymerization

    KAUST Repository

    Alghamdi, Reem D.

    2015-05-01

    Poly (vinyl ether)-based graft polymers have been synthesized by the combination of living cationic polymerization of vinyl ethers with other living or controlled/ living polymerization techniques (anionic and ATRP). The process involves the synthesis of well-defined homopolymers (PnBVE) and co/terpolymers [PnBVE-b-PCEVE-b-PSiDEGVE (ABC type) and PSiDEGVE-b-PnBVE-b-PSiDEGVE (CAC type)] by sequential living cationic polymerization of n-butyl vinyl ether (nBVE), 2-chloroethyl vinyl ether (CEVE) and tert-butyldimethylsilyl ethylene glycol vinyl ether (SiDEGVE), using mono-functional {[n-butoxyethyl acetate (nBEA)], [1-(2-chloroethoxy) ethyl acetate (CEEA)], [1-(2-(2-(t-butyldimethylsilyloxy)ethoxy) ethoxy) ethyl acetate (SiDEGEA)]} or di-functional [1,4-cyclohexanedimethanol di(1-ethyl acetate) (cHMDEA), (VEMOA)] initiators. The living cationic polymerizations of those monomers were conducted in hexane at -20 0C using Et3Al2Cl3 (catalyst) in the presence of 1 M AcOEt base.[1] The PCEVE segments of the synthesized block terpolymers were then used to react with living macroanions (PS-DPE-Li; poly styrene diphenyl ethylene lithium) to afford graft polymers. The quantitative desilylation of PSiDEGVE segments by n-Bu4N+F- in THF at 0 °C led to graft co- and terpolymers in which the polyalcohol is the outer block. These co-/terpolymers were subsequently subjected to “grafting-from” reactions by atom transfer radical polymerization (ATRP) of styrene to afford more complex macromolecular architectures. The base assisted living cationic polymerization of vinyl ethers were also used to synthesize well-defined α-hydroxyl polyvinylether (PnBVE-OH). The resulting polymers were then modified into an ATRP macro-initiator for the synthesis of well-defined block copolymers (PnBVE-b-PS). Bifunctional PnBVE with terminal malonate groups was also synthesized and used as a precursor for more complex architectures such as H-shaped block copolymer by “grafting-from” or

  15. Detection of fuel rod leakage

    International Nuclear Information System (INIS)

    Nuclear reactor fuel rod leakage is determined by measurement of vibrational characteristics of a resilient, flexible means sealed within the upper end caps of the fuel elements. The flexible means, which is preferably a metallic diaphragm, is set into motion by the impact of an internal metal rod which is operated by an external magnetic field, thereby permitting an indication of the pressure inside a fuel element without disturbing the welded assembly. The metal rod is activated and the vibration measurements are made through the use of a special tool which fits near the end cap of the fuel element to be tested

  16. Detection of fuel rod leakage

    International Nuclear Information System (INIS)

    Nuclear reactor fuel rod leakage is determined by measurement of vibrational characteristics of a resilient, flexible means sealed within the upper end caps of the fuel elements. The flexible means, which is preferably a metallic diaphragm, is set into motion by the impact of an internal metal rod which is operated by an external magnetic field, thereby permitting an indication of the pressure inside a fuel element without disturbing the welded assembly. The metal rod is activated and the vibration measurements are made through the use of a special tool which fits near the end cap of the fuel element to be tested. 5 claims, 8 figures

  17. Air leakage in refrigerated vans. Final report

    Energy Technology Data Exchange (ETDEWEB)

    1978-12-01

    The Air Leakage in Refrigerated Vans Project was initiated by the Department of Energy to assess the impact of air leakage on fuel consumption of highway transport refrigeration equipment. The project, conducted from September of 1977 to December of 1978 collected air leakage data on refrigerated trailers, containers and truck bodies. A Prototype Air Leakage Test Set was developed, designed and constructed to take measurements, and a total of 92 representative vehicles were examined. The results of the study indicate that air leakage causes a 25% increase in the average refrigeration load. However, the majority of transport refrigeration units are equipped with control systems that require the power to be supplied continuously, so that the potential reduction in fuel consumption that can be expected by reduced air leakage is limited. Alternative control techniques and power sources for the control and operation of refrigeration unit components other than the compressor could reduce fuel consumption by approximately 60%.

  18. Containment leakage during severe accident conditions

    International Nuclear Information System (INIS)

    An alternate to the THRESHOLD model used in most severe accident risk assessments has been investigated. One reference plant for each of six containment types has been studied to determine the magnitude of containment leakage that would result from the pressures and temperatures associated with severe accident conditions. Containment penetrations having the greatest potential for early containment leakage are identified. The studies indicate that containment leakage through penetrations prior to reaching containment threshold pressures (currently reported containment shell failure pressures) should be considered in severe accident risk assessments. Failure of non-metallic seals for containment penetrations can be a significant source of containment leakage under severe accident pressure and temperature conditions. Although studies of containment types are useful in identifying sources of containment leakage, final conclusions may need to be plant specific. Recommendations concerning future studies to better develop the use of continuous leakage models are provided. 9 references, 4 figures, 2 tables

  19. Leakage, entrepreneurship, and satisfaction in hospitality

    OpenAIRE

    GALDÓN SALVADOR, JOSÉ LUIS; Garrigós Simón, Fernando José; Gil Pechuán, Ignacio

    2013-01-01

    This is an Accepted Manuscript of an article published by Taylor & Francis in The Service Industries Journal on 2013, available online:http://www.tandfonline.com/10.1080/02642069.2013.740464 Tourism is a very important tool for economic development. However, its economic effects are mainly conditioned by the level of leakage. This work defines leakage, provides an original evaluation of the entrepreneurial environment in showing that it is the one with the lowest level of leakage, and crea...

  20. Leakage Power Reduction Using Bitwidth Optimization

    OpenAIRE

    Yasuura, Hiroto

    2002-01-01

    Leakage power dissipation constitutes an increasing fraction of the total power in modern semiconductor technologies. Designing power efficient products will require consideration of leakage power in the earliest phases of design. This paper addresses bitwidth optimization focusing on leakage power reduction for system-level low-power design. By means of tuning the design parameter, bitwidth tailored to a given application requirements, the datapath width of processors and size of memories ar...

  1. Leakage-resilient cryptography from minimal assumptions

    DEFF Research Database (Denmark)

    Hazay, Carmit; López-Alt, Adriana; Wee, Hoeteck;

    2013-01-01

    We present new constructions of leakage-resilient cryptosystems, which remain provably secure even if the attacker learns some arbitrary partial information about their internal secret key. For any polynomial ℓ, we can instantiate these schemes so as to tolerate up to ℓ bits of leakage. While there...... has been much prior work constructing such leakage-resilient cryptosystems under concrete number-theoretic and algebraic assumptions, we present the first schemes under general and minimal assumptions. In particular, we construct: Leakage-resilient public-key encryption from any standard public...

  2. Macromolecular crystallography radiation damage research: what’s new?

    OpenAIRE

    Garman, Elspeth F.; Weik, Martin

    2011-01-01

    Radiation damage in macromolecular crystallography has become a mainstream concern over the last ten years. The current status of research into this area is briefly assessed, and the ten new papers published in this issue are set into the context of previous work in the field. Some novel and exciting developments emerging over the last two years are also summarized.

  3. Effects of macromolecular crowding and osmolyte on human Tau fibrillation.

    Science.gov (United States)

    Wu, Yingying; Teng, Ningning; Li, Sen

    2016-09-01

    Tau fibrillation is reported to be involved in neurodegenerative disorders, such as Alzheimer's disease, in which the natural environment is very crowded in the cells. Understanding the role of crowding environments in regulating Tau fibrillation is of great importance for elucidating the etiology of these diseases. In this experiment, the effects of macromolecular crowding and osmolyte reagents in the crowding environment on Tau fibrillation were studied by thioflavin T binding, SDS-PAGE and TEM assays. Ficoll 70 and Dextran 70 of different concentrations were used as macromolecular crowding reagents inside the cells and showed a strong enhancing effect on the fibrillation of normal and hyperphosphorylated Tau. The enhancing effect of Dextran is stronger than that of Ficoll 70 at the same concentration. In addition, the cellular osmolyte sucrose was found to protect Tau against fibrillation, and inhibit the enhancing effect of macromolecular crowding on Tau fibrillation. A possible model for the fibrillation process of Tau and the effect of macromolecular crowding and osmolyte on this process was proposed based on these experimental results. The information obtained from our study can enhance the understanding of how proteins aggregate and avoid aggregation in crowded physiological environments and might lead to a better understanding of the molecular mechanisms of Alzheimer's disease in vivo. PMID:26683879

  4. Valve packing leakage monitoring device

    International Nuclear Information System (INIS)

    A device for monitoring leakage of fluid across a seal in a component connected to a pressurized fluid system including a housing having a chamber with an inlet for receiving fluid leaking across the seal and an outlet. A positioning means is connected to an orifice plug so as to move the plug for permitting the fluid to be discharged through the orifice at the same rate at which it enters the first chamber and means for detecting the movement of the plug is provided to produce and output signal corresponding to the distance moved by the plug and thereby indicate flow rate. The positioning means compromise a piston attached to the plug by a hollow tube and springs, which at low flow rates locate the piston. When flow increases sufficiently pressure increases and urges the piston upwards. A magnetic portion of tube actuates a succession of proximity switches to indicate flow rate. (author)

  5. Predicting Envelope Leakage in Attached Dwellings

    Energy Technology Data Exchange (ETDEWEB)

    Faakye, O.; Arena, L.; Griffiths, D.

    2013-07-01

    The most common method for measuring air leakage is to use a single blower door to pressurize and/or depressurize the test unit. In detached housing, the test unit is the entire home and the single blower door measures air leakage to the outside. In attached housing, this 'single unit', 'total', or 'solo' test method measures both the air leakage between adjacent units through common surfaces as well air leakage to the outside. Measuring and minimizing this total leakage is recommended to avoid indoor air quality issues between units, reduce energy losses to the outside, reduce pressure differentials between units, and control stack effect. However, two significant limitations of the total leakage measurement in attached housing are: for retrofit work, if total leakage is assumed to be all to the outside, the energy benefits of air sealing can be significantly over predicted; for new construction, the total leakage values may result in failing to meet an energy-based house tightness program criterion. The scope of this research is to investigate an approach for developing a viable simplified algorithm that can be used by contractors to assess energy efficiency program qualification and/or compliance based upon solo test results.

  6. Quantifying Information Leakage of Randomized Protocols

    DEFF Research Database (Denmark)

    Biondi, Fabrizio; Wasowski, Andrzej; Legay, Axel;

    2013-01-01

    The quantification of information leakage provides a quantitative evaluation of the security of a system. We propose the usage of Markovian processes to model and analyze the information leakage of deterministic and probabilistic systems. We show that this method generalizes the lattice of inform...

  7. Radiofrequency radiation leakage from microwave ovens

    International Nuclear Information System (INIS)

    This work presents data on the amount of radiation leakage from 117 microwave ovens in domestic and restaurant use in the West Bank, Palestine. The study of leakage is based on the measurements of radiation emissions from the oven in real-life conditions by using a frequency selective field strength measuring system. The power density from individual ovens was measured at a distance of 1 m and at the height of centre of door screen. The tested ovens were of different types, models with operating powers between 1000 and 1600 W and ages ranging from 1 month to >20 y, including 16 ovens with unknown ages. The amount of radiation leakage at a distance of 1 m was found to vary from 0.43 to 16.4 μW cm-1 with an average value equalling 3.64 μW cm-2. Leakages from all tested microwave ovens except for seven ovens (∼6 % of the total) were below 10 μW cm-2. The highest radiation leakage from any tested oven was ∼16.4 μW cm-2, and found in two cases only. In no case did the leakage exceed the limit of 1 μWcm-1 recommended by the ICNIRP for 2.45-GHz radiofrequency. This study confirms a linear correlation between the amount of leakage and both oven age and operating power, with a stronger dependence of leakage on age. (authors)

  8. Leakage-Resilient Circuits without Computational Assumptions

    DEFF Research Database (Denmark)

    Dziembowski, Stefan; Faust, Sebastian

    2012-01-01

    Physical cryptographic devices inadvertently leak information through numerous side-channels. Such leakage is exploited by so-called side-channel attacks, which often allow for a complete security breache. A recent trend in cryptography is to propose formal models to incorporate leakage into the...

  9. Leakage Resilient Secure Two-Party Computation

    DEFF Research Database (Denmark)

    Damgård, Ivan Bjerre; Hazay, Carmit; Patra, Arpita

    2012-01-01

    returns its result. Almost independently of secure computation, the area of {\\em leakage resilient cryptography} has recently been evolving intensively, studying the question of designing cryptographic primitives that remain secure even when some information about the secret key is leaked. In this paper....... \\item {\\em Leakage resilient oblivious transfer.} We present the first construction for 1-out-of-2 oblivious transfer with security against leakage of a constant fraction of the honest party's memory. Our protocol is based on the OT construction presented by Peikert et al.~\\cite{PeikertVW08}. \\item {\\em...... Leakage resilient Yao's Garbled Circuit~\\cite{Yao82}.} We provide the first general construction for secure two-party computation and show how to adapt the proof from~\\cite{LP09} of Yao's protocol into the leakage resilient setting. Our result holds for a restricted set of functions due to technicalities...

  10. Investigation on correlation of aerosol leakage rate with gas leakage rate in capillary

    International Nuclear Information System (INIS)

    It is necessary to build up the correlation of the aerosol leakage rate with the gas leakage rate for evaluating aerosol leakage of nuclear facilities. The method of evaluating leakage rate of gas and sub-micron aerosol was summarized and also investigated by experiment. The effects of upstream aerosol number concentration, flow velocity and upstream pressure on aerosol leakage were analyzed based on the experimental results. The results show that the aerosol leakage rate is linearly related to the gas leakage rate in capillary when the gas leakage rate is higher than 10-4 Pa · m3 · S-1; the aerosol leakage rate falls sharply due to the diffusion deposition mainly for sub-micron aerosol when the gas le rate is lower than 10-4 Pa · m3 · S-1. The aerosol leakage rate is explored to be expressed as a function of the gas leakage rate and the orifice length under some certain assumptions for practical application. (authors)

  11. Leakage of caesium braquitherapy sources

    International Nuclear Information System (INIS)

    In several Venezuelan public hospitals where cervix uteri tumours are treated by intracavitary radiotherapy, that use manual after loading Fletcher method, with Caesium 137 sources, the use of improper source holders, locally manufactured from pieces of drainage plastic tubing, which deteriorated and created a corrosive environment all around the sources, omission of manufacturer's recommendations regarding corrosion information, source storage, inspection and testing, violation of International Atomic Energy Agency Radiation Protection Procedures, and lack of proper regulatory control, resulted integrity damage to about sixty special form sources (ISO2919 C 63322), leakage of Cs-137 from a supposed insoluble refractory active content (caesium silicoaluminate), and contamination of applicators, floors and bedding. When the situation was detected by means removal contamination tests, after routine inspections, the sources were removed from the hospitals, decontaminated by means of immersion in 3% EDTA solution in ultrasonic bath, subjected to leaking assessment tests, and the ones that passed were placed in low cost stainless steel source holders, designed and built by the instituto Venezolano de Investigaciones Cientificas (IVIC) returned to the hospitals. The leaking sources were removed from use and considered radioactive waste. In order to avoid the occurrence of similar situations, all the importers of such sources are now required to send them to IVIC for testing and placement in proper source holders, before they are shipped to the hospitals. (author)

  12. Climate Policy and Carbon Leakage

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2008-07-01

    This report explores the effects of the EU emissions trading scheme on the aluminium sector (i.e. competitiveness loss and carbon leakage). With its very high electricity intensity, primary aluminium stands out in the heavy industry picture: a sector whose emissions are not capped in the present EU ETS, European aluminium smelters still stand to lose profit margins and, possibly, market shares, as electricity prices increase following CO2 caps on generators' emissions - the famous pass-through of CO2 prices into electricity prices. The analysis includes a method of quantification of this issue, based on two indicators: profit margins and trade flows. As the EU is at the forefront of such policy, the paper provides policy messages to all countries on how trade exposed energy-intensive industries can be 'moved' by carbon constraint. This also is a contentious topic in Australia, Japan, New Zealand, and the US, where ambitious climate policies -- including cap-and-trade systems -- are currently debated.

  13. Macromolecular Brushes as Stabilizers of Hydrophobic Solute Nanoparticles.

    Science.gov (United States)

    Luo, Hanying; Raciti, David; Wang, Chao; Herrera-Alonso, Margarita

    2016-06-01

    Macromolecular brushes bearing poly(ethylene glycol) and poly(d,l-lactide) side chains were used to stabilize hydrophobic solute nanoparticles formed by a rapid change in solvent quality. Unlike linear diblock copolymers with the same hydrophilic and hydrophobic block chemistries, the brush copolymer enabled the formation of ellipsoidal β-carotene nanoparticles, which in cosolvent mixtures developed into rod-like structures, resulting from a combination of Ostwald ripening and particle aggregation. The stabilizing ability of the copolymer was highly dependent on the mobility of the hydrophobic component, influenced by its molecular weight. As shown here, asymmetric amphiphilic macromolecular brushes of this type may be used as hydrophobic drug stabilizers and potentially assist the shape control of nonspherical aggregate morphologies. PMID:27035279

  14. Isotope labeling for NMR studies of macromolecular structure and interactions

    Energy Technology Data Exchange (ETDEWEB)

    Wright, P.E. [Scripps Research Institute, La Jolla, CA (United States)

    1994-12-01

    Implementation of biosynthetic methods for uniform or specific isotope labeling of proteins, coupled with the recent development of powerful heteronuclear multidimensional NMR methods, has led to a dramatic increase in the size and complexity of macromolecular systems that are now amenable to NMR structural analysis. In recent years, a new technology has emerged that combines uniform {sup 13}C, {sup 15}N labeling with heteronuclear multidimensional NMR methods to allow NMR structural studies of systems approaching 25 to 30 kDa in molecular weight. In addition, with the introduction of specific {sup 13}C and {sup 15}N labels into ligands, meaningful NMR studies of complexes of even higher molecular weight have become feasible. These advances usher in a new era in which the earlier, rather stringent molecular weight limitations have been greatly surpassed and NMR can begin to address many central biological problems that involve macromolecular structure, dynamics, and interactions.

  15. Effects of macromolecular chelators on intestinal cadmium absorption in mice

    Energy Technology Data Exchange (ETDEWEB)

    Andersen, O.; Nielsen, J.B.; Bulman, R.A.

    1989-01-01

    Suppression of absorption by macromolecular chelators have been sucessful with several metals. In this paper a series of immobilized chelators ranging from DTPA to S-containing soft bases have been synthetized and investigated for ability to suppress intestinal uptake of /sup 109/Cd/sup 2+/ in mice. Dextran-O-ethyl-mercaptan, xanthates derived from polysaccharides and polyvinyl alcohol, dithiocarbamates of polyethylene imine and aminoethyl cellulose, and DTPA immobilized on aminopropyl silica were all ineffective. DTPA immobilized on aminoethyl cellulose even enhanced the intestinal uptake. The macromolecular chelators were without extensive effect on organ distribution of absorbed cadmium, except for dithiocarbamate immobilized on polyethylene imine, which enhanced the deposition of cadmium in several organs including the brain. Although the results are discouragign, they indicate that desing and synthesis of immobilized vicinal dithio compounds may represent an avenue for development of non-absorbable chelators with high affinity for cadmium.

  16. Stochastic reaction–diffusion algorithms for macromolecular crowding

    Science.gov (United States)

    Sturrock, Marc

    2016-06-01

    Compartment-based (lattice-based) reaction–diffusion algorithms are often used for studying complex stochastic spatio-temporal processes inside cells. In this paper the influence of macromolecular crowding on stochastic reaction–diffusion simulations is investigated. Reaction–diffusion processes are considered on two different kinds of compartmental lattice, a cubic lattice and a hexagonal close packed lattice, and solved using two different algorithms, the stochastic simulation algorithm and the spatiocyte algorithm (Arjunan and Tomita 2010 Syst. Synth. Biol. 4, 35–53). Obstacles (modelling macromolecular crowding) are shown to have substantial effects on the mean squared displacement and average number of molecules in the domain but the nature of these effects is dependent on the choice of lattice, with the cubic lattice being more susceptible to the effects of the obstacles. Finally, improvements for both algorithms are presented.

  17. Integrating Topology and Geometry for Macro-Molecular Simulations

    OpenAIRE

    Moore, Edward L. F.; Peters, Thomas J.; Ferguson, David R.; Neil F Stewart

    2005-01-01

    Emerging macro-molecular simulations, such as supercoiling of DNA and protein unfolding, have an opportunity to profit from two decades of experience with geometric models within computer-aided geometric design (CAGD). For CAGD, static models are often sufficient, while form and function are inextricably related in biochemistry, resulting in greater attention to critical topological characteristics of these dynamic models. The greater emphasis upon dynamic change in macro-...

  18. E-MSD: the European Bioinformatics Institute Macromolecular Structure Database

    OpenAIRE

    Boutselakis, H.; Dimitropoulos, D.; Fillon, J.; Golovin, A.; Henrick, K.; A. Hussain; Ionides, J.; M. John; Keller, P. A.; Krissinel, E.; McNeil, P.; Naim, A; Newman, R.; Oldfield, T.; Pineda, J

    2003-01-01

    The E-MSD macromolecular structure relational database (http://www.ebi.ac.uk/msd) is designed to be a single access point for protein and nucleic acid structures and related information. The database is derived from Protein Data Bank (PDB) entries. Relational database technologies are used in a comprehensive cleaning procedure to ensure data uniformity across the whole archive. The search database contains an extensive set of derived properties, goodness-of-fit indicators, and links to other ...

  19. Application of complex macromolecular architectures for advanced microelectronic materials.

    Science.gov (United States)

    Hedrick, James L; Magbitang, Teddie; Connor, Eric F; Glauser, Thierry; Volksen, Willi; Hawker, Craig J; Lee, Victor Y; Miller, Robert D

    2002-08-01

    The distinctive features of well-defined, three-dimensional macromolecules with topologies designed to enhance solubility and amplify end-group functionality facilitated nanophase morphologies in mixtures with organosilicates and ultimately nanoporous organosilicate networks. Novel macromolecular architectures including dendritic and star-shaped polymers and organic nanoparticles were prepared by a modular approach from several libraries of building blocks including various generations of dendritic initiators and dendrons, selectively placed to amplify functionality and/or arm number, coupled with living polymerization techniques. Mixtures of an organosilicate and the macromolecular template were deposited, cured, and the phase separation of the organic component, organized the vitrifying organosilicate into nanostructures. Removal of the sacrificial macromolecular template, also denoted as porogen, by thermolysis, yielded the desired nanoporous organosilicate, and the size scale of phase separation was strongly dependent on the chain topology. These materials were designed for use as interlayer, ultra-low dielectric insulators for on-chip applications with dielectric constant values as low as 1.5. The porogen design, chemistry and role of polymer architecture on hybrid and pore morphology will be emphasized. PMID:12203311

  20. Experimental evaluation of clinical colon anastomotic leakage

    DEFF Research Database (Denmark)

    Pommergaard, Hans-Christian

    2014-01-01

    , ischemia and insufficient surgical technique have been suggested to play a central role. Animal models are valuable means to evaluate pathophysiological mechanisms and may be used to test preventive measures aiming at reducing the risk of anastomotic leakage, such as external anastomotic coating. The aim...... leakage. STUDY 1: This study is a systematic review using the databases MEDLINE and Rex. MEDLINE was searched up to October 2010 to identify studies on experimental animal models of clinical colon anastomotic leakage. From the Rex database, textbooks on surgical aspects as well as gastrointestinal...... physiology and anatomy of experimental animals were identified. The results indicated that the mouse and the pig are the best suited animals to evaluate clinical anastomotic leakage. However, the pig model is less validated and more costly to use compared with the mouse. Most frequently, rats are used as...

  1. Early Alzheimer's Linked to Brain 'Leakage'

    Science.gov (United States)

    ... nih.gov/medlineplus/news/fullstory_159116.html Early Alzheimer's Linked to Brain 'Leakage' Normally, blood-brain barrier ... HealthDay News) -- People in the early stages of Alzheimer's disease may have more "leaks" in the barrier ...

  2. Early Alzheimer's Linked to Brain 'Leakage'

    Science.gov (United States)

    ... https://medlineplus.gov/news/fullstory_159116.html Early Alzheimer's Linked to Brain 'Leakage' Normally, blood-brain barrier ... HealthDay News) -- People in the early stages of Alzheimer's disease may have more "leaks" in the barrier ...

  3. Analysis of ONKALO water leakage mapping results

    International Nuclear Information System (INIS)

    As part of the programme for the final disposal of spent nuclear fuel, an analysis has been compiled of water leakage mapping performed in ONKALO. Leakage mapping is part of the Olkiluoto Monitoring Programme (OMO) and the field work has been carried out by Posiva Oy. The main objective of the study is to analyse differences detected between mapping campaigns carried out typically twice a year in 2005-2012. Differences were estimated to be caused by the differences in groundwater conditions caused by seasonal effects or by differences between the years. The effect of technical changes like shotcreting, postgrouting, ventilation etc. on the results was also studied. The development of the visualisation of mapping results was also an objective of this work. Leakage mapping results have been reported yearly in the monitoring reports of Hydrology with some brief comments on the detected differences. In this study, the development of the total area and the number of different leakages as well as the correlation of changes with shotcreting and grouting operations were studied. In addition, traces of fractures on tunnel surfaces, and the location of rock bolts and drain pipes were illustrated together with leakage mapping. In water leakage mapping, the tunnel surfaces are visually mapped to five categories: dry, damp, wet, dripping and flowing. Major changes were detected in the total area of damp leakages. It is likely that the increase has been caused by the condensation of warm ventilation air on the tunnel surfaces and the corresponding decrease by the evaporation of moisture into the dry ventilation air. Shotcreting deep in ONKALO may also have decreased the total area of damp leakages. Changes in the total area and number of wet leakages correlate at least near the surface with differences in yearly precipitation. It is possible that strong rains have also caused a temporary increase in wet leakages. Dripping and wet leakages have been observed on average more

  4. Analysis of ONKALO water leakage mapping results

    Energy Technology Data Exchange (ETDEWEB)

    Ahokas, H.; Nummela, J; Turku, J. [Poeyry Finland Oy, Vantaa (Finland)

    2014-04-15

    As part of the programme for the final disposal of spent nuclear fuel, an analysis has been compiled of water leakage mapping performed in ONKALO. Leakage mapping is part of the Olkiluoto Monitoring Programme (OMO) and the field work has been carried out by Posiva Oy. The main objective of the study is to analyse differences detected between mapping campaigns carried out typically twice a year in 2005-2012. Differences were estimated to be caused by the differences in groundwater conditions caused by seasonal effects or by differences between the years. The effect of technical changes like shotcreting, postgrouting, ventilation etc. on the results was also studied. The development of the visualisation of mapping results was also an objective of this work. Leakage mapping results have been reported yearly in the monitoring reports of Hydrology with some brief comments on the detected differences. In this study, the development of the total area and the number of different leakages as well as the correlation of changes with shotcreting and grouting operations were studied. In addition, traces of fractures on tunnel surfaces, and the location of rock bolts and drain pipes were illustrated together with leakage mapping. In water leakage mapping, the tunnel surfaces are visually mapped to five categories: dry, damp, wet, dripping and flowing. Major changes were detected in the total area of damp leakages. It is likely that the increase has been caused by the condensation of warm ventilation air on the tunnel surfaces and the corresponding decrease by the evaporation of moisture into the dry ventilation air. Shotcreting deep in ONKALO may also have decreased the total area of damp leakages. Changes in the total area and number of wet leakages correlate at least near the surface with differences in yearly precipitation. It is possible that strong rains have also caused a temporary increase in wet leakages. Dripping and wet leakages have been observed on average more

  5. Study on Detection Technique for Pipeline Leakage

    Institute of Scientific and Technical Information of China (English)

    李健; 王立坤; 周琰; 靳世久

    2003-01-01

    Pipeline integrity defect is a considerable portion in all the defects. Therefore, the study on detection technique is of great concern to the owners of pipelines. A real-time monitoring system of pipeline defect is established. For unexpected accidents of pipeline leakage, several methods of signal processing, including wavelet analysis are utilized. The leakage can be located accurately in time. This system is applied to many long distance pipelines in China, which has made great contributions to the economy.

  6. Measuring Privacy Leakage for IDS Rules

    OpenAIRE

    Ulltveit-Moe, Nils; Oleshchuk, Vladimir

    2013-01-01

    This paper proposes a measurement approach for estimating the privacy leakage from Intrusion Detection System (IDS) alarms. Quantitative information flow analysis is used to build a theoretical model of privacy leakage from IDS rules, based on information entropy. This theoretical model is subsequently verified empirically both based on simulations and in an experimental study. The analysis shows that the metric is able to distinguish between IDS rules that have no or low expected privacy lea...

  7. Asymmetric gate induced drain leakage and body leakage in vertical MOSFETs with reduced parasitic capacitance

    OpenAIRE

    Gili, E.; Kunz, D.; Uchino, T; Hakim, M. M. A.; De Groot, C. H. (Kees); Ashburn, P.; Hall, S.

    2006-01-01

    Vertical MOSFETs, unlike conventional planar MOSFETs, do not have identical structures at the source and drain, but have very different gate overlaps and geometric configurations. This paper investigates the effect of the asymmetric source and drain geometries of surround-gate vertical MOSFETs on the drain leakage currents in the OFF-state region of operation. Measurements of gate-induced drain leakage (GIDL) and body leakage are carried out as a function of temperature for transistors connec...

  8. Pickering unit 1 containment leakage characterization

    International Nuclear Information System (INIS)

    Results of the design pressure test carried out on Pickering Reactor Building number 1 during late 1992 showed that the leakage rate of the building was close to the safety analysis value of 2.7% contained mass per hour at the design pressure of 41.4 kPa(g) and was significantly higher than that reported after the previous test conducted in the spring of 1987. This unexpected finding initiated the longest and the most comprehensive containment leakage investigation ever undertaken by Ontario Hydro. A thorough investigation of leakage behaviour by repeated testing, inspections, leak search and analysis was launched. The extensive leak search effort included items such as: leak source detection by soap solution application, use of ultrasonic detectors, fogging and tracer gas techniques, systematic systems isolation, thermal imaging of the exterior, and quantification of leak sites by flowmeter and bagging. Using a specially designed volumetric technique, the root cause of the problem was finally confirmed as being due to 'pressure dependent laminar leakage' through the hairline cracks in the dome concrete. Structural analysis indicated that the thermal gradients and pressure loading combined to cause the cracking early in the structure's operating history and that overall structural integrity has not been compromised. Leakage rate analysis using a new fluid mechanics model augmented by the effect of thermal strains indicated that the leakage could be significantly less under certain transient temperature gradient conditions. Several options for repairing the dome were considered by a multidisciplinary team and it was finally decided to apply a specially engineered multilayer elastomeric coating to the exterior concrete surface. When the unit was re-tested in October 1993, a dramatic ten-fold improvement in leakage rate (down to 0.25%/h at design pressure) was observed. This is lower than even the commissioning results and comparable to the performance of newer units

  9. The contrasting effect of macromolecular crowding on amyloid fibril formation.

    Directory of Open Access Journals (Sweden)

    Qian Ma

    Full Text Available BACKGROUND: Amyloid fibrils associated with neurodegenerative diseases can be considered biologically relevant failures of cellular quality control mechanisms. It is known that in vivo human Tau protein, human prion protein, and human copper, zinc superoxide dismutase (SOD1 have the tendency to form fibril deposits in a variety of tissues and they are associated with different neurodegenerative diseases, while rabbit prion protein and hen egg white lysozyme do not readily form fibrils and are unlikely to cause neurodegenerative diseases. In this study, we have investigated the contrasting effect of macromolecular crowding on fibril formation of different proteins. METHODOLOGY/PRINCIPAL FINDINGS: As revealed by assays based on thioflavin T binding and turbidity, human Tau fragments, when phosphorylated by glycogen synthase kinase-3β, do not form filaments in the absence of a crowding agent but do form fibrils in the presence of a crowding agent, and the presence of a strong crowding agent dramatically promotes amyloid fibril formation of human prion protein and its two pathogenic mutants E196K and D178N. Such an enhancing effect of macromolecular crowding on fibril formation is also observed for a pathological human SOD1 mutant A4V. On the other hand, rabbit prion protein and hen lysozyme do not form amyloid fibrils when a crowding agent at 300 g/l is used but do form fibrils in the absence of a crowding agent. Furthermore, aggregation of these two proteins is remarkably inhibited by Ficoll 70 and dextran 70 at 200 g/l. CONCLUSIONS/SIGNIFICANCE: We suggest that proteins associated with neurodegenerative diseases are more likely to form amyloid fibrils under crowded conditions than in dilute solutions. By contrast, some of the proteins that are not neurodegenerative disease-associated are unlikely to misfold in crowded physiological environments. A possible explanation for the contrasting effect of macromolecular crowding on these two sets of

  10. How to attribute market leakage to CDM projects

    NARCIS (Netherlands)

    Vöhringer, F.; Kuosmanen, T.K.; Dellink, R.B.

    2006-01-01

    Economic studies suggest that market leakage rates of greenhouse gas abatement can reach the two-digit percentage range. Although the Marrakesh Accords require Clean Development Mechanism (CDM) projects to account for leakage, most projects neglect market leakage. Insufficient leakage accounting is

  11. Calculation of Leakage Inductance for High Frequency Transformers

    DEFF Research Database (Denmark)

    Ouyang, Ziwei; Jun, Zhang; Hurley, William Gerard

    2015-01-01

    Frequency dependent leakage inductance is often observed. High frequency eddy current effects cause a reduction in leakage inductance. The proximity effect between adjacent layers is responsible for the reduction of leakage inductance. This paper gives a detailed analysis of high frequency leakag...

  12. Impact of synchrotron radiation on macromolecular crystallography: a personal view

    International Nuclear Information System (INIS)

    This article, largely based on personal experiences of the authors, reviews the early history of the application of synchrotron radiation to structural biology, and particularly protein crystallography, to show the tremendous impact that this experimental innovation has had on these disciplines. The introduction of synchrotron radiation sources almost four decades ago has led to a revolutionary change in the way that diffraction data from macromolecular crystals are being collected. Here a brief history of the development of methodologies that took advantage of the availability of synchrotron sources are presented, and some personal experiences with the utilization of synchrotrons in the early days are recalled

  13. Workshop on algorithms for macromolecular modeling. Final project report, June 1, 1994--May 31, 1995

    Energy Technology Data Exchange (ETDEWEB)

    Leimkuhler, B.; Hermans, J.; Skeel, R.D.

    1995-07-01

    A workshop was held on algorithms and parallel implementations for macromolecular dynamics, protein folding, and structural refinement. This document contains abstracts and brief reports from that workshop.

  14. Determination of leakage areas in nuclear piping

    Energy Technology Data Exchange (ETDEWEB)

    Keim, E. [Siemens/KWU, Erlangen (Germany)

    1997-04-01

    For the design and operation of nuclear power plants the Leak-Before-Break (LBB) behavior of a piping component has to be shown. This means that the length of a crack resulting in a leak is smaller than the critical crack length and that the leak is safely detectable by a suitable monitoring system. The LBB-concept of Siemens/KWU is based on computer codes for the evaluation of critical crack lengths, crack openings, leakage areas and leakage rates, developed by Siemens/KWU. In the experience with the leak rate program is described while this paper deals with the computation of crack openings and leakage areas of longitudinal and circumferential cracks by means of fracture mechanics. The leakage areas are determined by the integration of the crack openings along the crack front, considering plasticity and geometrical effects. They are evaluated with respect to minimum values for the design of leak detection systems, and maximum values for controlling jet and reaction forces. By means of fracture mechanics LBB for subcritical cracks has to be shown and the calculation of leakage areas is the basis for quantitatively determining the discharge rate of leaking subcritical through-wall cracks. The analytical approach and its validation will be presented for two examples of complex structures. The first one is a pipe branch containing a circumferential crack and the second one is a pipe bend with a longitudinal crack.

  15. Risk factors of pancreatic leakage after pancreaticoduodenectomy

    Institute of Scientific and Technical Information of China (English)

    Yin-Mo Yang; Xiao-Dong Tian; Yan Zhuang; Wei-Min Wang; Yuan-Lian Wan; Yan-Ting Huang

    2005-01-01

    AIM: To analyze the risk factors for pancreatic leakage after pancreaticoduodenectomy (PD) and to evaluate whether duct-to-mucosa pancreaticojejunostomy could reduce the risk of pancreatic leakage.METHODS: Sixty-two patients who underwent PD at our hospital between January 2000 and November 2003 were reviewed retrospectively. The primary diseases of the patients included pancreas cancer, ampullary cancer, bile duct cancer, islet cell cancer, duodenal cancer, chronic pancreatitis, pancreatic cystadenoma, and gastric cancer.Standard PD was performed for 25 cases, PD with extended lymphadenectomy for 27 cases, pylorus-preserving PD for 10 cases. A duct-to-mucosa pancreaticojejunostomy was performed for patients with a hard pancreas and a dilated pancreatic duct, and a traditional end-to-end invagination pancreaticojejunostomy for patients with a soft pancreas and a non-dilated duct. Patients were divided into two groups according to the incidence of postoperative pancreaticojejunal anastomotic leakage: 10 cases with leakage and 52 cases without leakage. Seven preoperative and six intraoperative risk factors with the potential to affect the incidence of pancreatic leakage were analyzed with SPSS10.0 software. Logistic regression was then used to determine the effect of multiple factors on pancreatic leakage.RESULTS: Of the 62 patients, 10 (16.13%) were identified as having pancreatic leakage after operation. Other major postoperative complications included delayed gastric emptying (eight patients), abdominal bleeding (four patients), abdominal abscess (three patients) and wound infection (two patients). The overall surgical morbidity was 43.5% (27/62). The hospital mortality in this series was 4.84% (3/62), and the mortality associated with pancreatic fistula was 10% (1/10). Sixteen cases underwent duct-to-mucosa pancreaticojejunostomy and 1 case (1/16, 6.25%) devel-oped postoperative pancreatic leakage, 46 cases underwent invagination pancreaticojejunostomy and 9

  16. Air leakage in residential solar heating systems

    Science.gov (United States)

    Shingleton, J. G.; Cassel, D. E.; Overton, R. L.

    1981-02-01

    A series of computer simulations was performed to evaluate the effects of component air leakage on system thermal performance for a typical residential solar heating system, located in Madison, Wisconsin. Auxiliary energy required to supplement solar energy for space heating was determined using the TRNSYS computer program, for a range of air leakage rates at the solar collector and pebble bed storage unit. The effects of heat transfer and mass transfer between the solar equipment room and the heated building were investigated. The effect of reduced air infiltration into the building due to pressurized by the solar air heating system were determined. A simple method of estimating the effect of collector array air leakage on system thermal performance was evaluated, using the f CHART method.

  17. A Survey On Data Leakage Detection

    Directory of Open Access Journals (Sweden)

    Mrs. Grinal Tuscano

    2015-04-01

    Full Text Available Data is an important assets for an enterprise. Data must be protected against loss and destruction. In IT field huge data is being exchanged among multiple people at every moment. During sharing of the data, there are huge chances of data vulnerability, leakage or alteration. So, to prevent these problems, a survey on data leakage detection system has been done. This paper talks about the concept, causes and techniques to detect the data leakage. Businesses processes facts and figures to turn raw data into useful information. This information is used by businesses to generate and improve revenue at every mile stone. Thus, along with data availability and accessibility data security is also very important.

  18. Leakage current measurement in transformerless PV inverters

    DEFF Research Database (Denmark)

    Kerekes, Tamas; Sera, Dezso; Mathe, Laszlo

    2012-01-01

    Photovoltaic (PV) installations have seen a huge increase during the last couple of years. Transformerless PV inverters are gaining more share of the total inverter market, due to their high conversion efficiency, small weight and size. Nevertheless safety should have an important role in case of...... these tranformerless systems, due to the missing galvanic isolation. Leakage and fault current measurement is a key issue for these inverter topologies to be able to comply with the required safety standards. This article presents the test results of two different current measurement sensors that were...... suggested to be used in commercial PV inverters for the measurement of leakage and fault ground currents. The German VDE0126–1–1 standard gives the limit for fault and leakage ground currents and all grid connected PV inverters have to comply with these limits and disconnect from the grid in case of a fault....

  19. Component external leakage and rupture frequency estimates

    International Nuclear Information System (INIS)

    In order to perform detailed internal flooding risk analyses of nuclear power plants, external leakage and rupture frequencies are needed for various types of components - piping, valves, pumps, flanges, and others. However, there appears to be no up-to-date, comprehensive source for such frequency estimates. This report attempts to fill that void. Based on a comprehensive search of Licensee Event Reports (LERs) contained in Nuclear Power Experience (NPE), and estimates of component populations and exposure times, component external leakage and rupture frequencies were generated. The remainder of this report covers the specifies of the NPE search for external leakage and rupture events, analysis of the data, a comparison with frequency estimates from other sources, and a discussion of the results

  20. Survey on Techniques for Detecting Data Leakage

    Directory of Open Access Journals (Sweden)

    Bhosale Pranjali A

    2016-06-01

    Full Text Available In current business scenario, critical data is to be shared and transferred by organizations to many stake holders in order to complete particular task. The critical data include intellectual copyright, patient information etc. The activities like sharing and transferring of such critical data includes threats like leakage of information, misuse of data, illegal access to data and/or alteration of data. It is necessary to deal with such problem efficiently and effectively, popular solutions to this problem are use of firewalls, data loss prevention tools and watermarking. But sometimes culprit succeeds in overcoming such security measures hence, if organizations becomes able to find out the guilty client responsible for leakage of particular data then risk of data leakage is reduced. For this many systems are proposed, this paper includes information about techniques discussed in some of such methodologies.

  1. Detection of Leakage Using Data Reconciliation

    International Nuclear Information System (INIS)

    Recently, we have begun to develop the algorithm of data reconciliation (DR) using physical models. At the same time, we are looking for a good example to demonstrate the concept and the benefit of the DR. We have studied the advanced algorithms for the detection of the RCS unidentified leakage. The conventional algorithm to resolve this problem is based on the mass balance using filtered signals. Discussing the applicability for the detection of tank leakages, we found the DR may be a good solution in considering the instrument channel uncertainties involved in the parameters. In this paper, we will discuss the basic principles of the DR and will present an algorithm to resolve the leakage detection problems

  2. Enzymes as Green Catalysts for Precision Macromolecular Synthesis.

    Science.gov (United States)

    Shoda, Shin-Ichiro; Uyama, Hiroshi; Kadokawa, Jun-Ichi; Kimura, Shunsaku; Kobayashi, Shiro

    2016-02-24

    The present article comprehensively reviews the macromolecular synthesis using enzymes as catalysts. Among the six main classes of enzymes, the three classes, oxidoreductases, transferases, and hydrolases, have been employed as catalysts for the in vitro macromolecular synthesis and modification reactions. Appropriate design of reaction including monomer and enzyme catalyst produces macromolecules with precisely controlled structure, similarly as in vivo enzymatic reactions. The reaction controls the product structure with respect to substrate selectivity, chemo-selectivity, regio-selectivity, stereoselectivity, and choro-selectivity. Oxidoreductases catalyze various oxidation polymerizations of aromatic compounds as well as vinyl polymerizations. Transferases are effective catalysts for producing polysaccharide having a variety of structure and polyesters. Hydrolases catalyzing the bond-cleaving of macromolecules in vivo, catalyze the reverse reaction for bond forming in vitro to give various polysaccharides and functionalized polyesters. The enzymatic polymerizations allowed the first in vitro synthesis of natural polysaccharides having complicated structures like cellulose, amylose, xylan, chitin, hyaluronan, and chondroitin. These polymerizations are "green" with several respects; nontoxicity of enzyme, high catalyst efficiency, selective reactions under mild conditions using green solvents and renewable starting materials, and producing minimal byproducts. Thus, the enzymatic polymerization is desirable for the environment and contributes to "green polymer chemistry" for maintaining sustainable society. PMID:26791937

  3. Data Management System at the Photon Factory Macromolecular Crystallography Beamline

    International Nuclear Information System (INIS)

    Macromolecular crystallography is a very powerful tool to investigate three-dimensional structures of macromolecules at the atomic level, and is widely spread among structural biology researchers. Due to recent upgrades of the macromolecular crystallography beamlines at the Photon Factory, beamline throughput has improved, allowing more experiments to be conducted during a user's beam time. Although the number of beamlines has increased, so has the number of beam time applications. Consequently, both the experimental data from users' experiments and data derived from beamline operations have dramatically increased, causing difficulties in organizing these diverse and large amounts of data for the beamline operation staff and users. To overcome this problem, we have developed a data management system by introducing commercial middleware, which consists of a controller, database, and web servers. We have prepared several database projects using this system. Each project is dedicated to a certain aspect such as experimental results, beam time applications, beam time schedule, or beamline operation reports. Then we designed a scheme to link all the database projects.

  4. Macromolecular Crowding Enhances Thermal Stability of Rabbit Muscle Creatine Kinase

    Institute of Scientific and Technical Information of China (English)

    ZHU Jiang; HE Huawei; LI Sen

    2008-01-01

    The effect of dextran on the conformation (or secondary structure) and thermal stability of creatine kinase (CK) was studied using the far-ultraviolet (UV) circular dichroism (CD) spectra.The results showed that lower concentrations of dextran (less than 60 g/L) induced formation of the secondary CK structures.However,the secondary structure content of CK decreased when the dextran concentrations exceeded 60 g/L.Thermally induced transition curves were measured for CK in the presence of different concentrations of dextran by far-UV CD.The thermal transition curves were fitted to a two-state model by a nonlinear,least-squares method to obtain the transition temperature of the unfolding transition.An increase in the tran- sition temperature was observed with the increase of the dextran concentration.These observations qualita-tively accord with predictions of a previously proposed model for the effect of intermolecular excluded volume (macromolecular crowding) on protein stability and conformation.These findings imply that the effects of macromolecular crowding can have an important influence on our understanding of how protein folding oc-curs in vivo.

  5. Cardiac voltage-gated calcium channel macromolecular complexes.

    Science.gov (United States)

    Rougier, Jean-Sébastien; Abriel, Hugues

    2016-07-01

    Over the past 20years, a new field of research, called channelopathies, investigating diseases caused by ion channel dysfunction has emerged. Cardiac ion channels play an essential role in the generation of the cardiac action potential. Investigators have largely determined the physiological roles of different cardiac ion channels, but little is known about the molecular determinants of their regulation. The voltage-gated calcium channel Cav1.2 shapes the plateau phase of the cardiac action potential and allows the influx of calcium leading to cardiomyocyte contraction. Studies suggest that the regulation of Cav1.2 channels is not uniform in working cardiomyocytes. The notion of micro-domains containing Cav1.2 channels and different calcium channel interacting proteins, called macro-molecular complex, has been proposed to explain these observations. The objective of this review is to summarize the currently known information on the Cav1.2 macromolecular complexes in the cardiac cell and discuss their implication in cardiac function and disorder. This article is part of a Special Issue entitled: Cardiomyocyte Biology: Integration of Developmental and Environmental Cues in the Heart edited by Marcus Schaub and Hughes Abriel. PMID:26707467

  6. Probing the hydration water diffusion of macromolecular surfaces and interfaces

    Science.gov (United States)

    Ortony, Julia H.; Cheng, Chi-Yuan; Franck, John M.; Kausik, Ravinath; Pavlova, Anna; Hunt, Jasmine; Han, Songi

    2011-01-01

    We probe the translational dynamics of the hydration water surrounding the macromolecular surfaces of selected polyelectrolytes, lipid vesicles and intrinsically disordered proteins with site specificity in aqueous solutions. These measurements are made possible by the recent development of a new instrumental and methodological approach based on Overhauser dynamic nuclear polarization (DNP)-enhanced nuclear magnetic resonance (NMR) spectroscopy. This technique selectively amplifies 1H NMR signals of hydration water around a spin label that is attached to a molecular site of interest. The selective 1H NMR amplification within molecular length scales of a spin label is achieved by utilizing short-distance range (~r-3) magnetic dipolar interactions between the 1H spin of water and the electron spin of a nitroxide radical-based label. Key features include the fact that only minute quantities (=100 μM) sample concentrations are needed. There is no size limit on the macromolecule or molecular assembly to be analyzed. Hydration water with translational correlation times between 10 and 800 ps is measured within ~10 Å distance of the spin label, encompassing the typical thickness of a hydration layer with three water molecules across. The hydration water moving within this time scale has significant implications, as this is what is modulated whenever macromolecules or molecular assemblies undergo interactions, binding or conformational changes. We demonstrate, with the examples of polymer complexation, protein aggregation and lipid-polymer interaction, that the measurements of interfacial hydration dynamics can sensitively and site specifically probe macromolecular interactions.

  7. PRIGo: a new multi-axis goniometer for macromolecular crystallography

    International Nuclear Information System (INIS)

    The design and performance of the new multi-axis goniometer PRIGo developed at the Swiss Light Source at Paul Scherrer Institute is described. The Parallel Robotics Inspired Goniometer (PRIGo) is a novel compact and high-precision goniometer providing an alternative to (mini-)kappa, traditional three-circle goniometers and Eulerian cradles used for sample reorientation in macromolecular crystallography. Based on a combination of serial and parallel kinematics, PRIGo emulates an arc. It is mounted on an air-bearing stage for rotation around ω and consists of four linear positioners working synchronously to achieve x, y, z translations and χ rotation (0–90°), followed by a ϕ stage (0–360°) for rotation around the sample holder axis. Owing to the use of piezo linear positioners and active correction, PRIGo features spheres of confusion of <1 µm, <7 µm and <10 µm for ω, χ and ϕ, respectively, and is therefore very well suited for micro-crystallography. PRIGo enables optimal strategies for both native and experimental phasing crystallographic data collection. Herein, PRIGo hardware and software, its calibration, as well as applications in macromolecular crystallography are described

  8. The Phenix Software for Automated Determination of Macromolecular Structures

    Science.gov (United States)

    Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor; Chen, Vincent B.; Echols, Nathaniel; Headd, Jeffrey J.; Hung, Li-Wei; Jain, Swati; Kapral, Gary J.; Grosse Kunstleve, Ralf W.; McCoy, Airlie J.; Moriarty, Nigel W.; Oeffner, Robert D.; Read, Randy J.; Richardson, David C.; Richardson, Jane S.; Terwilliger, Thomas C.; Zwart, Peter H.

    2011-01-01

    X-ray crystallography is a critical tool in the study of biological systems. It is able to provide information that has been a prerequisite to understanding the fundamentals of life. It is also a method that is central to the development of new therapeutics for human disease. Significant time and effort are required to determine and optimize many macromolecular structures because of the need for manual interpretation of complex numerical data, often using many different software packages, and the repeated use of interactive three-dimensional graphics. The Phenix software package has been developed to provide a comprehensive system for macromolecular crystallographic structure solution with an emphasis on automation. This has required the development of new algorithms that minimize or eliminate subjective input in favour of built-in expert-systems knowledge, the automation of procedures that are traditionally performed by hand, and the development of a computational framework that allows a tight integration between the algorithms. The application of automated methods is particularly appropriate in the field of structural proteomics, where high throughput is desired. Features in Phenix for the automation of experimental phasing with subsequent model building, molecular replacement, structure refinement and validation are described and examples given of running Phenix from both the command line and graphical user interface. PMID:21821126

  9. PRIGo: a new multi-axis goniometer for macromolecular crystallography

    Energy Technology Data Exchange (ETDEWEB)

    Waltersperger, Sandro; Olieric, Vincent, E-mail: vincent.olieric@psi.ch; Pradervand, Claude [Paul Scherrer Institute, Villigen PSI (Switzerland); Glettig, Wayne [Centre Suisse d’Electronique et Microtechnique SA, Neuchâtel 2002 (Switzerland); Salathe, Marco; Fuchs, Martin R.; Curtin, Adrian; Wang, Xiaoqiang; Ebner, Simon; Panepucci, Ezequiel; Weinert, Tobias [Paul Scherrer Institute, Villigen PSI (Switzerland); Schulze-Briese, Clemens [Dectris Ltd, Baden 5400 (Switzerland); Wang, Meitian, E-mail: vincent.olieric@psi.ch [Paul Scherrer Institute, Villigen PSI (Switzerland)

    2015-05-09

    The design and performance of the new multi-axis goniometer PRIGo developed at the Swiss Light Source at Paul Scherrer Institute is described. The Parallel Robotics Inspired Goniometer (PRIGo) is a novel compact and high-precision goniometer providing an alternative to (mini-)kappa, traditional three-circle goniometers and Eulerian cradles used for sample reorientation in macromolecular crystallography. Based on a combination of serial and parallel kinematics, PRIGo emulates an arc. It is mounted on an air-bearing stage for rotation around ω and consists of four linear positioners working synchronously to achieve x, y, z translations and χ rotation (0–90°), followed by a ϕ stage (0–360°) for rotation around the sample holder axis. Owing to the use of piezo linear positioners and active correction, PRIGo features spheres of confusion of <1 µm, <7 µm and <10 µm for ω, χ and ϕ, respectively, and is therefore very well suited for micro-crystallography. PRIGo enables optimal strategies for both native and experimental phasing crystallographic data collection. Herein, PRIGo hardware and software, its calibration, as well as applications in macromolecular crystallography are described.

  10. Studies of water leakage in dams. Course

    International Nuclear Information System (INIS)

    With this training about the study of Water Leakage in Dams and Damming, the institutional worker will have the necessary criteria in this topic, and also an opportunity to analyze the impact of this engineering work at national level. This course permits to transmit part of the knowlege acquired by the Arcal XVIII RLA/8/018, Application of Tracer Techniques for Leakage in Dams and Damming Project, where ICE participates in agreement with Atomic Energy Commission of Costa Rica, sponsored by the International Organization of Atomic Energy. (author). 14 charts, 36 figs, 2 maps, 6 tabs

  11. The Leakage determination on corrosion fretting machine

    International Nuclear Information System (INIS)

    Fretting machine is an experimental loop to learn fretting corrosion phenomena wich is caused by loading and vibration. On the steam generator, one of the corrosion process that's occurred, it can be caused by vibration between tubes and bending material. Because of high flow rate inside the tube, the high frequency vibration will appeared so it can make the corrosion on bending material more faster. This process can be simulate by fretting machine. This machine has already damage because of leakage. So it will be repaired by dismantling, radiography testing and redrawing. from the result of radiography, the leakage is caused by cracking on bellows seals of the dynamic main support

  12. Surface plasmon interferometry and leakage radiation microscopy

    International Nuclear Information System (INIS)

    Full text: We demonstrate experimentally that leakage radiation microscopy (LRM) is an efficient way to analyze quantitatively surface plasmon polaritons (SPPs) propagation and interference fringes on a metal film. We describe briefly the principle of the LRM method and present different applications with 3 SPPs interferometers. In all cases a good agreement with theory is observed. (author)

  13. Poloidal field leakage optimization in ETE

    International Nuclear Information System (INIS)

    A very simple but efficient numerical algorithm is used to minimize the Ohmic coil field leakage into the plasma region of the tokamak ETE. After few interactions the code provides the positions and the current required for two pairs of compensation coils. Resulting optimum field intensity distribution is presented and commented. (author). 5 refs., 4 figs., 2 tabs

  14. Quantifying information leakage of randomized protocols

    DEFF Research Database (Denmark)

    Biondi, Fabrizio; Legay, Axel; Malacaria, Pasquale;

    2015-01-01

    The quantification of information leakage provides a quantitative evaluation of the security of a system. We propose the usage of Markovian processes to model deterministic and probabilistic systems. By using a methodology generalizing the lattice of information approach we model refined attacker...... the Onion Routing protocol....

  15. Prediction of sodium leakage and combustion phenomena

    International Nuclear Information System (INIS)

    Prediction of sodium leakage and combustion phenomena is important for the safety of liquid metal fast breeder reactors. In particular, small leakage is sensitive to obstacles and air flows. Falling liquid sodium is strongly deformed by separation and dispersion as well as various phenomena, such as combustion and accumulation, are combined. Since the existing finite difference methods need computational grids, it is so difficult to calculate separation and dispersion that small leakage of liquid sodium cannot be analyzed. MPS (Moving Particle Semi-implicit) method is a new numerical method, which is being developed in Univ of Tokyo. In the MPS method fluids are represented by macroscopic particles and governing equations are converted to equivalent particle interactions. Since computational grids are not necessary, separation and dispersion of fluids are easily calculated. Addition of combustion and accumulation will be easy as well because the fluid motion is just simulated by the particle motion. Thus, the objective of the present study is development of a numerical method to predict small size sodium leakage and combustion phenomena. In this paper, a model experiment using water and numerical calculations for this experiment are presented. (J.P.N.)

  16. Protection of window glass from acoustic leakage

    OpenAIRE

    Lych, Sergij; Rakobovchuk, Volodymyr

    2013-01-01

    In a survey was presented an analysis of the most common glass samples on the Ukrainian market on their protection level against leakage of acoustic information. The glass samples were studied by means of roentgen analysis, and the impact of elemental composition of glass according to a laser beam reflection factor was defined.

  17. In-vacuum long-wavelength macromolecular crystallography.

    Science.gov (United States)

    Wagner, Armin; Duman, Ramona; Henderson, Keith; Mykhaylyk, Vitaliy

    2016-03-01

    Structure solution based on the weak anomalous signal from native (protein and DNA) crystals is increasingly being attempted as part of synchrotron experiments. Maximizing the measurable anomalous signal by collecting diffraction data at longer wavelengths presents a series of technical challenges caused by the increased absorption of X-rays and larger diffraction angles. A new beamline at Diamond Light Source has been built specifically for collecting data at wavelengths beyond the capability of other synchrotron macromolecular crystallography beamlines. Here, the theoretical considerations in support of the long-wavelength beamline are outlined and the in-vacuum design of the endstation is discussed, as well as other hardware features aimed at enhancing the accuracy of the diffraction data. The first commissioning results, representing the first in-vacuum protein structure solution, demonstrate the promising potential of the beamline. PMID:26960130

  18. On macromolecular refinement at subatomic resolution withinteratomic scatterers

    Energy Technology Data Exchange (ETDEWEB)

    Afonine, Pavel V.; Grosse-Kunstleve, Ralf W.; Adams, Paul D.; Lunin, Vladimir Y.; Urzhumtsev, Alexandre

    2007-11-09

    A study of the accurate electron density distribution in molecular crystals at subatomic resolution, better than {approx} 1.0 {angstrom}, requires more detailed models than those based on independent spherical atoms. A tool conventionally used in small-molecule crystallography is the multipolar model. Even at upper resolution limits of 0.8-1.0 {angstrom}, the number of experimental data is insufficient for the full multipolar model refinement. As an alternative, a simpler model composed of conventional independent spherical atoms augmented by additional scatterers to model bonding effects has been proposed. Refinement of these mixed models for several benchmark datasets gave results comparable in quality with results of multipolar refinement and superior of those for conventional models. Applications to several datasets of both small- and macro-molecules are shown. These refinements were performed using the general-purpose macromolecular refinement module phenix.refine of the PHENIX package.

  19. MR lymphography with macromolecular Gd-DTPA compounds

    International Nuclear Information System (INIS)

    This paper investigates the suitability of macromolecular Gd-DTPA compounds as signal-enhancing lymphographic agents in MR imaging. Two Gd-DTPA polylysin compounds and Gd-DTPA albumin, with molecular weights of 48,000,170,000, and 87,000 daltons, respectively, were tested in rabbits at gadolinium doses of 5 and 15 μmol per animal. Three animals were examined at each dose with T1-weighted sequences. The iliac lymph nodes were imaged prior to and during unilateral endolymphatic infusion into a femoral lymph vessel as well as over a period of 2 hours thereafter. All contrast media showed a homogeneous and pronounced signal enhancement in the lymph nodes during infusion at both doses

  20. Macromolecular Crystallization with Microfluidic Free-Interface Diffusion

    Energy Technology Data Exchange (ETDEWEB)

    Segelke, B

    2005-02-24

    Fluidigm released the Topaz 1.96 and 4.96 crystallization chips in the fall of 2004. Topaz 1.96 and 4.96 are the latest evolution of Fluidigm's microfluidics crystallization technologies that enable ultra low volume rapid screening for macromolecular crystallization. Topaz 1.96 and 4.96 are similar to each other but represent a major redesign of the Topaz system and have of substantially improved ease of automation and ease of use, improved efficiency and even further reduced amount of material needed. With the release of the new Topaz system, Fluidigm continues to set the standard in low volume crystallization screening which is having an increasing impact in the field of structural genomics, and structural biology more generally. In to the future we are likely to see further optimization and increased utility of the Topaz crystallization system, but we are also likely to see further innovation and the emergence of competing technologies.

  1. Protein Coevolution and Isoexpression in Yeast Macromolecular Complexes

    Directory of Open Access Journals (Sweden)

    Reiner A. Veitia

    2007-01-01

    Full Text Available Previous studies in the yeast Saccharomyces cerevisiae have shown that genes encoding subunits of macromolecular complexes have similar evolutionary rates (K and expression levels (E. Besides, it is known that the expression of a gene is a strong predictor of its rate of evolution (i.e., E and K are correlated. Here we show that intracomplex variation of subunit expression correlates with intracomplex variation of their evolutionary rates (using two different measures of dispersion. However, a similar trend was observed for randomized complexes. Therefore, using a mathematical transformation, we created new variables capturing intracomplex variation of both E and K. The values of these new compound variables were smaller for real complexes than for randomized ones. This shows that proteins in complexes tend to have closer expressivities (E and K's simultaneously than in the randomly grouped genes. We speculate about the possible implications of this finding.

  2. Macromolecular organization of xyloglucan and cellulose in pea epicotyls

    International Nuclear Information System (INIS)

    Xyloglucan is known to occur widely in the primary cell walls of higher plants. This polysaccharide in most dicots possesses a cellulose-like main chain with three of every four consecutive residues substituted with xylose and minor addition of other sugars. Xyloglucan and cellulose metabolism is regulated by different processes; since different enzyme systems are probably required for the synthesis of their 1,4-β-linkages. A macromolecular complex composed of xyloglucan and cellulose only was obtained from elongating regions of etiolated pea stems. It was examined by light microscopy using iodine staining, by radioautography after labeling with [3H]fructose, by fluorescence microscopy using a fluorescein-lectin (fructose-binding) as probe, and by electron microscopy after shadowing. The techniques all demonstrated that the macromolecule was present in files of cell shapes, referred to here as cell-wall ghosts, in which xyloglucan was localized both on and between the cellulose microfibrils

  3. Macromolecular and dendrimer-based magnetic resonance contrast agents

    International Nuclear Information System (INIS)

    Magnetic resonance imaging (MRI) is a powerful imaging modality that can provide an assessment of function or molecular expression in tandem with anatomic detail. Over the last 20-25 years, a number of gadolinium-based MR contrast agents have been developed to enhance signal by altering proton relaxation properties. This review explores a range of these agents from small molecule chelates, such as Gd-DTPA and Gd-DOTA, to macromolecular structures composed of albumin, polylysine, polysaccharides (dextran, inulin, starch), poly(ethylene glycol), copolymers of cystamine and cystine with GD-DTPA, and various dendritic structures based on polyamidoamine and polylysine (Gadomers). The synthesis, structure, biodistribution, and targeting of dendrimer-based MR contrast agents are also discussed

  4. Macromolecular contrast agents for MR mammography: current status

    International Nuclear Information System (INIS)

    Macromolecular contrast media (MMCM) encompass a new class of diagnostic drugs that can be applied with dynamic MRI to extract both physiologic and morphologic information in breast lesions. Kinetic analysis of dynamic MMCM-enhanced MR data in breast tumor patients provides useful estimates of tumor blood volume and microvascular permeability, typically increased in cancer. These tumor characteristics can be applied to differentiate benign from malignant lesions, to define the angiogenesis status of cancers, and to monitor tumor response to therapy. The most immediate challenge to the development of MMCM-enhanced mammography is the identification of those candidate compounds that demonstrate the requisite long intravascular distribution and have the high tolerance necessary for clinical use. Potential mammographic applications and limitations of various MMCM, defined by either experimental animal testing or clinical testing in patients, are reviewed in this article. (orig.)

  5. Macromolecular and dendrimer-based magnetic resonance contrast agents

    Energy Technology Data Exchange (ETDEWEB)

    Bumb, Ambika; Brechbiel, Martin W. (Radiation Oncology Branch, National Cancer Inst., National Inst. of Health, Bethesda, MD (United States)), e-mail: pchoyke@mail.nih.gov; Choyke, Peter (Molecular Imaging Program, National Cancer Inst., National Inst. of Health, Bethesda, MD (United States))

    2010-09-15

    Magnetic resonance imaging (MRI) is a powerful imaging modality that can provide an assessment of function or molecular expression in tandem with anatomic detail. Over the last 20-25 years, a number of gadolinium-based MR contrast agents have been developed to enhance signal by altering proton relaxation properties. This review explores a range of these agents from small molecule chelates, such as Gd-DTPA and Gd-DOTA, to macromolecular structures composed of albumin, polylysine, polysaccharides (dextran, inulin, starch), poly(ethylene glycol), copolymers of cystamine and cystine with GD-DTPA, and various dendritic structures based on polyamidoamine and polylysine (Gadomers). The synthesis, structure, biodistribution, and targeting of dendrimer-based MR contrast agents are also discussed

  6. Probing the hydration water diffusion of macromolecular surfaces and interfaces

    International Nuclear Information System (INIS)

    We probe the translational dynamics of the hydration water surrounding the macromolecular surfaces of selected polyelectrolytes, lipid vesicles and intrinsically disordered proteins with site specificity in aqueous solutions. These measurements are made possible by the recent development of a new instrumental and methodological approach based on Overhauser dynamic nuclear polarization (DNP)-enhanced nuclear magnetic resonance (NMR) spectroscopy. This technique selectively amplifies 1H NMR signals of hydration water around a spin label that is attached to a molecular site of interest. The selective 1H NMR amplification within molecular length scales of a spin label is achieved by utilizing short-distance range (∼r-3) magnetic dipolar interactions between the 1H spin of water and the electron spin of a nitroxide radical-based label. Key features include the fact that only minute quantities (<10 μl) and dilute (≥100 μM) sample concentrations are needed. There is no size limit on the macromolecule or molecular assembly to be analyzed. Hydration water with translational correlation times between 10 and 800 ps is measured within ∼10 A distance of the spin label, encompassing the typical thickness of a hydration layer with three water molecules across. The hydration water moving within this time scale has significant implications, as this is what is modulated whenever macromolecules or molecular assemblies undergo interactions, binding or conformational changes. We demonstrate, with the examples of polymer complexation, protein aggregation and lipid-polymer interaction, that the measurements of interfacial hydration dynamics can sensitively and site specifically probe macromolecular interactions.

  7. Facilities for macromolecular crystallography at the Helmholtz-Zentrum Berlin

    International Nuclear Information System (INIS)

    The three macromolecular crystallography beamlines BL14.1, BL14.2 and BL14.3 at the BESSY II storage ring at the Helmholtz-Zentrum Berlin are described. Three macromolecular crystallography (MX) beamlines at the Helmholtz-Zentrum Berlin (HZB) are available for the regional, national and international structural biology user community. The state-of-the-art synchrotron beamlines for MX BL14.1, BL14.2 and BL14.3 are located within the low-β section of the BESSY II electron storage ring. All beamlines are fed from a superconducting 7 T wavelength-shifter insertion device. BL14.1 and BL14.2 are energy tunable in the range 5–16 keV, while BL14.3 is a fixed-energy side station operated at 13.8 keV. All three beamlines are equipped with CCD detectors. BL14.1 and BL14.2 are in regular user operation providing about 200 beam days per year and about 600 user shifts to approximately 50 research groups across Europe. BL14.3 has initially been used as a test facility and was brought into regular user mode operation during the year 2010. BL14.1 has recently been upgraded with a microdiffractometer including a mini-κ goniometer and an automated sample changer. Additional user facilities include office space adjacent to the beamlines, a sample preparation laboratory, a biology laboratory (safety level 1) and high-end computing resources. In this article the instrumentation of the beamlines is described, and a summary of the experimental possibilities of the beamlines and the provided ancillary equipment for the user community is given

  8. Radiation damage to nucleoprotein complexes in macromolecular crystallography

    Energy Technology Data Exchange (ETDEWEB)

    Bury, Charles; Garman, Elspeth F.; Ginn, Helen Mary [University of Oxford, South Parks Road, Oxford OX1 3QU (United Kingdom); Ravelli, Raimond B. G. [Maastricht University, PO Box 616, Maastricht 6200 MD (Netherlands); Carmichael, Ian [University of Notre Dame, Notre Dame, IN 46556 (United States); Kneale, Geoff; McGeehan, John E., E-mail: john.mcgeehan@port.ac.uk [University of Portsmouth, King Henry 1st Street, Portsmouth PO1 2DY (United Kingdom)

    2015-01-30

    Quantitative X-ray induced radiation damage studies employing a model protein–DNA complex revealed a striking partition of damage sites. The DNA component was observed to be far more resistant to specific damage compared with the protein. Significant progress has been made in macromolecular crystallography over recent years in both the understanding and mitigation of X-ray induced radiation damage when collecting diffraction data from crystalline proteins. In contrast, despite the large field that is productively engaged in the study of radiation chemistry of nucleic acids, particularly of DNA, there are currently very few X-ray crystallographic studies on radiation damage mechanisms in nucleic acids. Quantitative comparison of damage to protein and DNA crystals separately is challenging, but many of the issues are circumvented by studying pre-formed biological nucleoprotein complexes where direct comparison of each component can be made under the same controlled conditions. Here a model protein–DNA complex C.Esp1396I is employed to investigate specific damage mechanisms for protein and DNA in a biologically relevant complex over a large dose range (2.07–44.63 MGy). In order to allow a quantitative analysis of radiation damage sites from a complex series of macromolecular diffraction data, a computational method has been developed that is generally applicable to the field. Typical specific damage was observed for both the protein on particular amino acids and for the DNA on, for example, the cleavage of base-sugar N{sub 1}—C and sugar-phosphate C—O bonds. Strikingly the DNA component was determined to be far more resistant to specific damage than the protein for the investigated dose range. At low doses the protein was observed to be susceptible to radiation damage while the DNA was far more resistant, damage only being observed at significantly higher doses.

  9. Residential Forced Air System Cabinet Leakage and Blower Performance

    OpenAIRE

    Walker, Iain S.

    2010-01-01

    This project evaluated the air leakage and electric power consumption of Residential HVAC components, with a particular focus on air leakage of furnace cabinets. Laboratory testing of HVAC components indicated that air leakage can be significant and highly variable from unit to unit ? indicating the need for a standard test method and specifying maximum allowable air leakage in California State energy codes. To further this effort, this project provided technical assistance for the developm...

  10. Methane leakage in natural gas operations

    International Nuclear Information System (INIS)

    The world gas industry is efficient in conservation of natural gas within its systems. As the influence of methane as an infra-red absorbent gas has been more widely recognized, the considerations of methane's greenhouse effect has become vitally important to gas companies around the world. The industry is universally environmentally conscious. natural gas transmission and distribution companies want to maintain their image as suppliers of clean fuel. Further reductions in methane leakage --- particularly in older distribution systems --- can, should and will be pursued. Unfortunately, there has been little exchange of views on methane leakages between commentators on environmental matters and gas companies and organizations. There is absolutely no need for the industry to avoid the issue of greenhouse gases. Without industry involvement, the environmental debate concerning fossil fuels could lead to selective interpretation of scientific views and available evidence. Companies and authorities would be presented with confusing, contradictory evidence on which to base policy approaches and regulations

  11. Techniques for Leakage Power Reduction in Nanoscale Circuits: A Survey

    DEFF Research Database (Denmark)

    Liu, Wei

    This report surveys progress in the field of designing low power especially low leakage CMOS circuits in deep submicron era. The leakage mechanism and various recently proposed run time leakage reduction techniques are presented. Two designs from Cadence and Sony respectively, which can represent...

  12. Junction leakage measurements with micro four-point probes

    DEFF Research Database (Denmark)

    Lin, Rong; Petersen, Dirch Hjorth; Wang, Fei;

    2012-01-01

    We present a new, preparation-free method for measuring the leakage current density on ultra-shallow junctions. The junction leakage is found by making a series of four-point sheet resistance measurements on blanket wafers with variable electrode spacings. The leakage current density is calculated...

  13. Inward Leakage in Tight-Fitting PAPRs

    OpenAIRE

    Frank C. Koh; Johnson, Arthur T.; Rehak, Timothy E.

    2011-01-01

    A combination of local flow measurement techniques and fog flow visualization was used to determine the inward leakage for two tight-fitting powered air-purifying respirators (PAPRs), the 3M Breathe-Easy PAPR and the SE 400 breathing demand PAPR. The PAPRs were mounted on a breathing machine head form, and flows were measured from the blower and into the breathing machine. Both respirators leaked a little at the beginning of inhalation, probably through their exhalation valves. In both cases,...

  14. TRACKING DOWN DATA LEAKAGE BY USING ENCRYPTED FAKE OBJECTS

    OpenAIRE

    Anugu Rahul Reddy; BalaKrishna Bangaru

    2014-01-01

    This paper contains concept of data leakage, its causes of leakage and different techniques to protect and detect the data leakage. The value of the data is incredible, so it should not be leaked or altered. In the field of IT, huge database is being used. This database is shared with multiple people at a time. But during this sharing of the data, there are huge chances of data vulnerability, leakage or alteration. So, to prevent these problems, a data leakage detection system has...

  15. Alopecia associated with unexpected leakage from electron cone

    International Nuclear Information System (INIS)

    Excessive irradiation due to unexpected leakage was found on a patient receiving electron beam therapy. The cause of this leakage was analyzed and the amount of leakage was measured for different electron beam energies. The highest leakage occurred with a 6 x 6 cm cone using a 12 MeV electron beam. The leakage dose measured along the side of the cone could be as great as 40%. Until the cones are modified or redesigned, it is advised that all patient setups be carefully reviewed to assure that no significant patient areas are in the side scatter region

  16. Alopecia associated with unexpected leakage from electron cone

    Energy Technology Data Exchange (ETDEWEB)

    Wen, B.C.; Pennington, E.C.; Hussey, D.H.; Jani, S.K.

    1989-06-01

    Excessive irradiation due to unexpected leakage was found on a patient receiving electron beam therapy. The cause of this leakage was analyzed and the amount of leakage was measured for different electron beam energies. The highest leakage occurred with a 6 x 6 cm cone using a 12 MeV electron beam. The leakage dose measured along the side of the cone could be as great as 40%. Until the cones are modified or redesigned, it is advised that all patient setups be carefully reviewed to assure that no significant patient areas are in the side scatter region.

  17. Project Boundary Setting and Leakage Treatment in CDM Project

    Institute of Scientific and Technical Information of China (English)

    ZOU Chen; WANG Shujuan; DUAN Maosheng; CHEN Changhe

    2005-01-01

    Project boundary setting and leakage treatment are two important issues to be considered when a clean development mechanism (CDM) project is being designed. There are still many uncertainties concerning these two issues. This paper reviews the concepts of project boundary setting and leakage in CDM projects, cites the types and sources of leakage, discusses the principles for determining leakage, and gives some proposed methods for dealing with leakage. A case study, using several steps to solve the boundary and leakage problems,shows how the analyzed principles and treatments can be implemented in a real project. Based on the result of the case study, the methods discussed are shown to be appropriate for settling leakage issues.

  18. Leakage of colon anastomoses: development of an experimental model in pigs

    DEFF Research Database (Denmark)

    Nordentoft, Tyge; Sørensen, Michael

    2007-01-01

    Background: In order to investigate anastomotic leakage, a number of experimental animal studies have been previously carried out. Due to the low frequency of spontaneous anastomotic leakages, there have been studies on gastrointestinal anastomoses with iatrogenically produced leakages. A leakage...

  19. JBluIce-EPICS control system for macromolecular crystallography

    International Nuclear Information System (INIS)

    The trio of macromolecular crystallography beamlines constructed by the General Medicine and Cancer Institutes Collaborative Access Team (GM/CA-CAT) in Sector 23 of the Advanced Photon Source (APS) have been in growing demand owing to their outstanding beam quality and capacity to measure data from crystals of only a few micrometres in size. To take full advantage of the state-of-the-art mechanical and optical design of these beamlines, a significant effort has been devoted to designing fast, convenient, intuitive and robust beamline controls that could easily accommodate new beamline developments. The GM/CA-CAT beamline controls are based on the power of EPICS for distributed hardware control, the rich Java graphical user interface of Eclipse RCP and the task-oriented philosophy as well as the look and feel of the successful SSRL BluIce graphical user interface for crystallography. These beamline controls feature a minimum number of software layers, the wide use of plug-ins that can be written in any language and unified motion controls that allow on-the-fly scanning and optimization of any beamline component. This paper describes the ways in which BluIce was combined with EPICS and converted into the Java-based JBluIce, discusses the solutions aimed at streamlining and speeding up operations and gives an overview of the tools that are provided by this new open-source control system for facilitating crystallographic experiments, especially in the field of microcrystallography.

  20. Macromolecular Powder Diffraction: Ready for genuine biological problems.

    Science.gov (United States)

    Karavassili, Fotini; Margiolaki, Irene

    2016-01-01

    Knowledge of 3D structures of biological molecules plays a major role in both understanding important processes of life and developing pharmaceuticals. Among several methods available for structure determination, macromolecular X-ray powder diffraction (XRPD) has transformed over the past decade from an impossible dream to a respectable method. XRPD can be employed in biosciences for various purposes such as observing phase transitions, characterizing bulk pharmaceuticals, determining structures via the molecular replacement method, detecting ligands in protein-ligand complexes, as well as combining micro-sized single crystal crystallographic data and powder diffraction data. Studies using synchrotron and laboratory sources in some standard configuration setups are reported in this review, including their respective advantages and disadvantages. Methods presented here provide an alternative, complementary set of tools to resolve structural problems. A variety of already existing software packages for powder diffraction data processing and analysis, some of which have been adapted to large unit cell studies, are briefly described. This review aims to provide necessary elements of theory and current methods, along with practical explanations, available software packages and highlighted case studies. PMID:26786768

  1. Automated identification of elemental ions in macromolecular crystal structures

    International Nuclear Information System (INIS)

    The solvent-picking procedure in phenix.refine has been extended and combined with Phaser anomalous substructure completion and analysis of coordination geometry to identify and place elemental ions. Many macromolecular model-building and refinement programs can automatically place solvent atoms in electron density at moderate-to-high resolution. This process frequently builds water molecules in place of elemental ions, the identification of which must be performed manually. The solvent-picking algorithms in phenix.refine have been extended to build common ions based on an analysis of the chemical environment as well as physical properties such as occupancy, B factor and anomalous scattering. The method is most effective for heavier elements such as calcium and zinc, for which a majority of sites can be placed with few false positives in a diverse test set of structures. At atomic resolution, it is observed that it can also be possible to identify tightly bound sodium and magnesium ions. A number of challenges that contribute to the difficulty of completely automating the process of structure completion are discussed

  2. Polycapillary x-ray optics for macromolecular crystallography

    International Nuclear Information System (INIS)

    Polycapillary x-ray optics have found potential application in many different fields, including antiscatter and magnification in mammography, radiography, x-ray fluorescence, x-ray lithography, and x-ray diffraction techniques. In x-ray diffraction, an optic is used to collect divergent x-rays from a point source and redirect them into a quasi-parallel, or slightly focused beam. Monolithic polycapillary optics have been developed recently for macromolecular crystallography and have already shown considerable gains in diffracted beam intensity over pinhole collimation. Development is being pursued through a series of simulations and prototype optics. Many improvements have been made over the stage 1 prototype reported previously, which include better control over the manufacturing process, reducing the diameter of the output beam, and addition of a slight focusing at the output of the optic to further increase x-ray flux at the sample. The authors report the characteristics and performance of the stage 1 and stage 2 optics

  3. Synchrotron radiation macromolecular crystallography: science and spin-offs

    Directory of Open Access Journals (Sweden)

    John R. Helliwell

    2015-03-01

    Full Text Available A current overview of synchrotron radiation (SR in macromolecular crystallography (MX instrumentation, methods and applications is presented. Automation has been and remains a central development in the last decade, as have the rise of remote access and of industrial service provision. Results include a high number of Protein Data Bank depositions, with an increasing emphasis on the successful use of microcrystals. One future emphasis involves pushing the frontiers of using higher and lower photon energies. With the advent of X-ray free-electron lasers, closely linked to SR developments, the use of ever smaller samples such as nanocrystals, nanoclusters and single molecules is anticipated, as well as the opening up of femtosecond time-resolved diffraction structural studies. At SR sources, a very high-throughput assessment for the best crystal samples and the ability to tackle just a few micron and sub-micron crystals will become widespread. With higher speeds and larger detectors, diffraction data volumes are becoming long-term storage and archiving issues; the implications for today and the future are discussed. Together with the rise of the storage ring to its current pre-eminence in MX data provision, the growing tendency of central facility sites to offer other centralized facilities complementary to crystallography, such as cryo-electron microscopy and NMR, is a welcome development.

  4. Synthesis of a water-soluble macromolecular light stabilizer containing hindered amine structures

    Institute of Scientific and Technical Information of China (English)

    Wei Ma; Mei Meng; Xue Jiang; Bing-Tao Tang; Shu-Fen Zhang

    2013-01-01

    A novel water-soluble macromolecular light stabilizer was synthesized by grafting 2-chloro-4,6-bis-[(2,2,6,6-tetramethylpiperidin-4-yl)amino]-1,3,5-triazine onto polyvinylamine.The intermediate 2-chloro-4,6-bis-[(2,2,6,6-tetramethylpiperidin-4-yl)amino]-1,3,5-triazine and the obtained macromolecular light stabilizer were characterized by 1H NMR,HRMS,IR and UV spectroscopy.Cotton fabrics dyed with C.I.Reactive Yellow 145,C.l.Reactive Red 195 and C.I.Reactive Blue 19 were finished with the macromolecular light stabilizer,and the lightfastness of the dyes was tested.The results showed that the lightfastness of the reactive dyes was improved by 0.5-1.0 grade after being finished and the macromolecular light stabilizer exhibited good wash fastness and thermal stability.

  5. Rapid Metal -free Macromolecular Coupling via in situ Nitrile Oxide-Activated Alkene Cycloaddition

    OpenAIRE

    Isaacman, Michael J.; Cui, Weibin; Theogarajan, Luke S.

    2014-01-01

    Nitrile oxide 1,3 dipolar cycloaddition is a simple and powerful coupling methodology. However, the self-dimerization of nitrile oxides has prevented the widespread use of this strategy for macromolecular coupling. By combining an in situ nitrile oxide generation with a highly reactive activated dipolarophile, we have overcome these obstacles and present a metal-free macromolecular coupling strategy for the modular synthesis of several ABA triblock copolymers. Nitrile oxides were generated in...

  6. EVA Suit Microbial Leakage Investigation Project

    Science.gov (United States)

    Falker, Jay; Baker, Christopher; Clayton, Ronald; Rucker, Michelle

    2016-01-01

    The objective of this project is to collect microbial samples from various EVA suits to determine how much microbial contamination is typically released during simulated planetary exploration activities. Data will be released to the planetary protection and science communities, and advanced EVA system designers. In the best case scenario, we will discover that very little microbial contamination leaks from our current or prototype suit designs, in the worst case scenario, we will identify leak paths, learn more about what affects leakage--and we'll have a new, flight-certified swab tool for our EVA toolbox.

  7. Valve leakage inspection testing and maintenance process

    International Nuclear Information System (INIS)

    In valve maintenance, packing rings that prevent leakage along the valve stem must periodically be replaced, either during routine maintenance or to correct a leak or valve malfunction. Tools and procedures currently in use for valve packing removal and inspection are generally of limited value due to various access and application problems. A process has been developed by AECL Research that addresses these problems. The process, using incompressible fluid pressure, quickly and efficiently confirms the integrity of the valve backseat, extracts hard-to-remove valve packing sets, and verifies the leak tightness of the repacked valve

  8. Facepiece leakage and fitting of respirators

    International Nuclear Information System (INIS)

    The ways in which airborne contaminants can penetrate respirators and the factors which affect the fit of respirators are discussed. The fit of the respirator to the face is shown to be the most critical factor affecting the protection achieved by the user. Qualitative and quantitative fit testing techniques are described and their application to industrial respirator programs is examined. Quantitative measurement of the leakage of a respirator while worn can be used to numerically indicate the protection achieved. These numbers, often referred to as protection factors, are sometimes used as the basis for selecting suitable respirators and this practice is reviewed. (author)

  9. Analysis of U.S. residential air leakage database

    Energy Technology Data Exchange (ETDEWEB)

    Chan, Wanyu R.; Price, Phillip N.; Sohn, Michael D.; Gadgil, Ashok J.

    2003-07-01

    The air leakage of a building envelope can be determined from fan pressurization measurements with a blower door. More than 70,000 air leakage measurements have been compiled into a database. In addition to air leakage, the database includes other important characteristics of the dwellings tested, such as floor area, year built, and location. There are also data for some houses on the presence of heating ducts, and floor/basement construction type. The purpose of this work is to identify house characteristics that can be used to predict air leakage. We found that the distribution of leakage normalized with floor area of the house is roughly lognormal. Year built and floor area are the two most significant factors to consider when predicting air leakage: older and smaller houses tend to have higher normalized leakage areas compared to newer and larger ones. Results from multiple linear regression of normalized leakage with respect to these two factors are presented for three types of houses: low-income, energy-efficient, and conventional. We demonstrate a method of using the regression model in conjunction with housing characteristics published by the US Census Bureau to derive a distribution that describes the air leakage of the single-family detached housing stock. Comparison of our estimates with published datasets of air exchange rates suggests that the regression model generates accurate estimates of air leakage distribution.

  10. Geologic Carbon Sequestration: Leakage Potential and Policy Implications

    Science.gov (United States)

    Bielicki, J. M.; Peters, C. A.; Fitts, J. P.; Wilson, E. J.

    2014-12-01

    The geologic reservoirs that could be used for long-term sequestration of carbon dioxide (CO2) may have natural or manmade pathways that allow injected CO2, or the brine it displaces, to leak into overlying formations. Using a basin-scale leakage estimation model, we investigated the geophysical parameters that govern this leakage, and the resulting accumulations of leaked fluids in overlying formations. The results are discussed in the context of two polices aimed at governing long-term sequestration and protecting groundwater: the U.S. DOE guideline for storage permanence and the U.S. EPA UIC Program Class VI Rule. For a case study of CO2 injection into the Mt. Simon sandstone in the Michigan sedimentary basin, we showed that (1) the U.S. DOE guideline would allow for more leakage from larger injection projects than for smaller ones; (2) leakage amounts are determined mostly by well leakage permeability rather than by variation in formation permeabilities; (3) numerous leaking wells with anomalously high leakage permeabilities are necessary in order to achieve substantial leakage rates; (4) leakage can reach potable groundwater but intervening stratigraphic traps reduce the amount to be multiple orders of magnitude less than the leakage out of the reservoir, and (5) this leakage can reduce the Area of Review that is defined by the U.S. EPA as the area within which leakage can threaten groundwater. In summary, leakage that exceeds the U.S. DOE storage permanence goal would occur only under extreme conditions, the amount that reaches shallow potable groundwater may be inconsequential from a pollution standpoint, and leakage may be beneficial. Future federal policies should be harmonized to achieve the dual goals of protecting groundwater while allowing for adaptive management that incorporates uncertainties and imperfections inherent in geologic reservoirs.

  11. EM information leakage from display unit and visual inspection for its leakage source

    Science.gov (United States)

    Watanabe, Takashi; Sako, Hiroshi

    2013-05-01

    Display unit emits a small amount of electromagnetic wave. Although it is weak enough to prevent interference with human body, information leaks through it. This paper presents an experiment on exploring the leakage source by visually inspecting the screen images reconstructed from captured electromagnetic waves. Additionally, some countermeasures are investigated to avoid the problem.

  12. A Compact X-Ray System for Macromolecular Crystallography

    Science.gov (United States)

    Gubarev, Mikhail; Ciszak, Ewa; Ponomarev, Igor; Gibson, Walter; Joy, Marshall

    2000-01-01

    We describe the design and performance of a high flux x-ray system for a macromolecular crystallography that combines a microfocus x-ray generator (40 micrometer full width at half maximum spot size at a power level of 46.5 W) and a collimating polycapillary optic. The Cu Ka lpha x-ray flux produced by this optimized system through a 500,um diam orifice is 7.0 times greater than the x-ray flux previously reported by Gubarev et al. [M. Gubarev et al., J. Appl. Crystallogr. 33, 882 (2000)]. The x-ray flux from the microfocus system is also 2.6 times higher than that produced by a rotating anode generator equipped with a graded multilayer monochromator (green optic, Osmic Inc. CMF24-48-Cu6) and 40% less than that produced by a rotating anode generator with the newest design of graded multilayer monochromator (blue optic, Osmic, Inc. CMF12-38-Cu6). Both rotating anode generators operate at a power level of 5000 W, dissipating more than 100 times the power of our microfocus x-ray system. Diffraction data collected from small test crystals are of high quality. For example, 42 540 reflections collected at ambient temperature from a lysozyme crystal yielded R(sub sym)=5.0% for data extending to 1.70 A, and 4.8% for the complete set of data to 1.85 A. The amplitudes of the observed reflections were used to calculate difference electron density maps that revealed positions of structurally important ions and water molecules in the crystal of lysozyme using the phases calculated from the protein model.

  13. A Compact X-Ray System for Macromolecular Crystallography. 5

    Science.gov (United States)

    Gubarev, Mikhail; Ciszak, Ewa; Ponomarev, Igor; Joy, Marshall

    2000-01-01

    We describe the design and performance of a high flux x-ray system for macromolecular crystallography that combines a microfocus x-ray generator (40 gm FWHM spot size at a power level of 46.5Watts) and a 5.5 mm focal distance polycapillary optic. The Cu K(sub alpha) X-ray flux produced by this optimized system is 7.0 times above the X-ray flux previously reported. The X-ray flux from the microfocus system is also 3.2 times higher than that produced by the rotating anode generator equipped with a long focal distance graded multilayer monochromator (Green optic; CMF24-48-Cu6) and 30% less than that produced by the rotating anode generator with the newest design of graded multilayer monochromator (Blue optic; CMF12-38-Cu6). Both rotating anode generators operate at a power level of 5000 Watts, dissipating more than 100 times the power of our microfocus x-ray system. Diffraction data collected from small test crystals are of high quality. For example, 42,540 reflections collected at ambient temperature from a lysozyme crystal yielded R(sub sym) 5.0% for the data extending to 1.7A, and 4.8% for the complete set of data to 1.85A. The amplitudes of the reflections were used to calculate difference electron density maps that revealed positions of structurally important ions and water molecules in the crystal of lysozyme using the phases calculated from the protein model.

  14. Macromolecular compositions of phytoplankton in the Amundsen Sea, Antarctica

    Science.gov (United States)

    Kim, Bo Kyung; Lee, Jang Han; Joo, HuiTae; Song, Ho Jung; Yang, Eun Jin; Lee, Sang Hoon; Lee, Sang H.

    2016-01-01

    The biochemical compositions (proteins, carbohydrates, and lipids) of phytoplankton provide useful information for their environmental growth conditions and nutritional status as a basic food source for upper trophic consumers. Concentrations of these compositions were assessed at 100, 30, and 1% light penetration depths within the euphotic zone in the Amundsen Sea, Antarctica, using colorimetric techniques. The major inorganic nutrients were generally abundant throughout the study area. The average chlorophyll a (chl-a) concentration was 49.2 mg m-2 (S.D.=±27.6 mg m-2) and large phytoplankton (>20 μm) accounted for 64.1% of the total chl-a concentration. The biochemical compositions of the phytoplankton were not significantly different among different light depths or productivity stations. The overall compositions of proteins, carbohydrates, and lipids from all stations averaged 65.9% (S.D.=±12.5%), 22.4% (S.D.=±10.9%), and 11.7% (S.D.=±6.5%), respectively. Regardless of dominant phytoplankton species, nitrogen-abundant conditions sustained high protein compositions of phytoplankton in the Amundsen Sea during the cruise period. Based on the macromolecular compositions, the average food material (FM) concentration was 219.4 μg L-1 (S.D.=±151.1 μg L-1) and correlated positively with the primary productivity in the Amundsen Sea. High protein/carbohydrate ratios (>1) and large proportions of proteins suggest that phytoplankton provide nitrogen-sufficient foods to higher trophic consumers through a higher efficiency of protein carbon incorporated into herbivores.

  15. Residential Forced Air System Cabinet Leakage and Blower Performance

    Energy Technology Data Exchange (ETDEWEB)

    Walker, Iain S.; Dickerhoff, Darryl J.; Delp, William W.

    2010-03-01

    This project evaluated the air leakage and electric power consumption of Residential HVAC components, with a particular focus on air leakage of furnace cabinets. Laboratory testing of HVAC components indicated that air leakage can be significant and highly variable from unit to unit ? indicating the need for a standard test method and specifying maximum allowable air leakage in California State energy codes. To further this effort, this project provided technical assistance for the development of a national standard for Residential HVAC equipment air leakage. This standard is being developed by ASHRAE and is called"ASHRAE Standard 193P - Method of test for Determining the Air Leakage Rate of HVAC Equipment". The final part of this project evaluated techniques for measurement of furnace blower power consumption. A draft test procedure for power consumption was developed in collaboration with the Canadian General Standards Board: CSA 823"Performance Standard for air handlers in residential space conditioning systems".

  16. Calculation of transformers leakage reactance using electromagnetic energy technique

    International Nuclear Information System (INIS)

    Determination of transformer leakage reactance using magnetic cores has long been an area of interest to engineers involved in the design of power and distribution transformers. This is required for predicting the performance of transformers before actual assembly of the transformers. In this paper a closed form solution technique applicable to the leakage reactance calculations for transformers is presented. An emphasis is on the development of a simple method to calculate the leakage reactance of the distribution transformers and smaller transformers. Energy technique procedure for computing the leakage reactances in distribution transformers is presented. This method is very efficient compared with the use of flux element and image technique and is also remarkably accurate. Examples of calculated leakage inductances and the short circuit impedance are given for illustration. For validation, the results are compared with the results obtained using test. This paper presents a novel technique for calculation of the leakage inductance in different parts of the transformer using the electromagnetic stored energy

  17. Leakage Test Criteria for Subsea Christmas Tree Valves

    OpenAIRE

    Alstad, Charlotte

    2011-01-01

    This Master`s Thesis deal with integrity and barrier philosophy. A special focus has been on internal leakage through barrier elements. There is an increasing discussion about what a primary and secondary barrier is, how many barriers there should be, their permitted internal leakage acceptance criteria and their integrity. Subsea Christmas tree (XMT) is considered as a pressure barrier element in subsea production systems. Rules and regulations require frequent leakage testing of subsea XMT ...

  18. Vertebroplasty: Magnetic Resonance Findings Related to Cement Leakage Risk

    Energy Technology Data Exchange (ETDEWEB)

    Koh, Y.H.; Han, D.; Cha, J.H.; Seong, C.K.; Kim, J.; Choi, Y.H. [Dept. of Radiology, Seoul Municipal Boramae Hospital, Seoul (Korea, republic of)

    2007-04-15

    Purpose: To find magnetic resonance (MR) findings predicting cement leakage in patients receiving percutaneous vertebroplasty (PVP) due to osteoporotic compression fractures. Material and Methods: MR was done in 43 patients (age 52-89 years) before PVP (56 vertebrae), which was done via a bipedicular approach with fluoroscopic monitoring. Shortly after the procedure, a non-contrast-enhanced computed tomography (CT) scan was done at the vertebroplasty sites for evaluation of bone cement leakage. The following MR findings of fractured vertebral bodies were retrospectively reviewed for correlation with leakage risk: severity of bone-marrow edema, presence of a T2-weighted low-signal-intensity line, percentage residual vertebral body height, presence of either a vacuum or cystic change within the vertebral body, and presence of a cortical disruption. Results: After PVP, cement leakage was detected in 35 vertebrae (62.5%). Leakage was most frequently observed in the anterior external vertebral venous plexus (46%). Cement leakage rate increased when there was a cortical disruption (P = 0.037), especially at the endplates, while it decreased when there was a vacuum or a cystic change within the fractured vertebra (P 0.019). Other MR findings were not related to the risk of cement leakage. Conclusion: The risk of cement leakage in PVP increases when MR shows cortical disruption in a fractured vertebral body, especially at the endplates. It decreases when MR shows a vacuum or cystic change within the body. Keywords Cement leakage, MR imaging, spine, vertebroplasty.

  19. Transformerless photovoltaic inverters with leakage current and pulsating power elimination

    DEFF Research Database (Denmark)

    Tang, Yi; Yao, Wenli; Wang, H.;

    2015-01-01

    This paper presents a transformerless inverter topology, which is capable of simultaneously solving leakage current and pulsating power issues in grid-connected photovoltaic (PV) systems. Without adding any additional components to the system, the leakage current caused by the PV-to-ground parasi......This paper presents a transformerless inverter topology, which is capable of simultaneously solving leakage current and pulsating power issues in grid-connected photovoltaic (PV) systems. Without adding any additional components to the system, the leakage current caused by the PV...

  20. Fluid leakage near the percolation threshold

    Science.gov (United States)

    Dapp, Wolf B.; Müser, Martin H.

    2016-02-01

    Percolation is a concept widely used in many fields of research and refers to the propagation of substances through porous media (e.g., coffee filtering), or the behaviour of complex networks (e.g., spreading of diseases). Percolation theory asserts that most percolative processes are universal, that is, the emergent powerlaws only depend on the general, statistical features of the macroscopic system, but not on specific details of the random realisation. In contrast, our computer simulations of the leakage through a seal—applying common assumptions of elasticity, contact mechanics, and fluid dynamics—show that the critical behaviour (how the flow ceases near the sealing point) solely depends on the microscopic details of the last constriction. It appears fundamentally impossible to accurately predict from statistical properties of the surfaces alone how strongly we have to tighten a water tap to make it stop dripping and also how it starts dripping once we loosen it again.

  1. Markovian Processes for Quantitative Information Leakage

    DEFF Research Database (Denmark)

    Biondi, Fabrizio

    Quantification of information leakage is a successful approach for evaluating the security of a system. It models the system to be analyzed as a channel with the secret as the input and an output as observable by the attacker as the output, and applies information theory to quantify the amount of...... information transmitted through such channel, thus effectively quantifying how many bits of the secret can be inferred by the attacker by analyzing the system’s output. Channels are usually encoded as matrices of conditional probabilities, known as channel matrices. Such matrices grow exponentially in the...... size of the secret and observables, are cumbersome to compute and store, encode both the behavior of the system and assumptions about the attacker, and assume an input-output behavior of the system. For these reasons we propose to model the systemattacker scenario with Markovian models. We show that...

  2. Leakage tests on the EURATOM LCT coil

    International Nuclear Information System (INIS)

    The acceptance tests at ambient temperature on the superconducting LCT coil, which was developed and manufactured by Siemens, were successful. The size and complexity of the coil imposed high demands on in-process quality control. The helium leakage tests and integrity of the test procedures were particularly important. Leaks were detected at an early stage by means of inspection and test plans and were repaired at no great expense. Unsuitable components were detected by routine tests on critical parts, such as belows, current feed-throughs and potential separators under simulated operating conditions (cycles up to 4 K and 24 bar). The procedure for checking for helium leaks was selected such that the permissible leak rate could be proved within the minimum possible time. 500 m hollow conductors were tested using a specially developed procedure. Over 500 individual inspections and tests were performed using more than 20 different test set-ups. (orig.)

  3. Leakage of high active liquid waste into the thermowell of HALW evaporator (4/4). Repair work for leakage prevention

    International Nuclear Information System (INIS)

    Leakage of high active liquid waste into the thermowell of High Active Liquid Waste (HALW) Evaporator was confirmed when thermometers were replaced in Rokkasho Reprocessing Plant. We estimate that the cause of the leakage is tunnel corrosion at the bottom cap of the thermowell due to high temperature at the bottom of the evaporator. This paper deals with the repair work for the leakage prevention. (author)

  4. Synthesis and characterization of macromolecular layers grafted to polymer surfaces

    Science.gov (United States)

    Burtovyy, Oleksandr

    The composition and behavior of surfaces and interfaces play a pivotal role in dictating the overall efficiency of the majority of polymeric materials and devices. Surface properties of the materials can be altered using surface modification techniques. It is necessary to highlight that successful methods of surface modification should affect only the upper layer of the polymer material without changing bulk properties. The processes must introduce new functionalities to the surface, optimize surface roughness, lubrication, hydrophobicity, hydrophilicity, adhesion, conductivity, and/or biocompatibility. Research presented in this dissertation is dedicated to the synthesis, characterization, and application of thin macromolecular layers anchored to polymer substrates. Specifically, attachment of functional polymers via a "grafting to" approach has been extensively studied using PET and nylon model substrates. First, poly(glycidyl methacrylate) was used to introduce permanent functionalities to the model substrates by anchoring it to model films. Then, three different functional polymers were grafted on top of the previous layer. As one part of this study, the temperature and time dependence of grafting functional layers were studied. The surface coverage by hydrophobic polymer was determined from experimental data and predicted by a model. In general, the model has a high degree of predictive capability. Next, surface modification of polymeric fibers and membranes is presented as an important application of the polymer thin layers targeted in the study. Specifically, the procedures developed for surface modification of model substrates was employed for modification of PET, nylon, and cotton fabrics as well as PET track-etched membranes. Since epoxy groups are highly reactive in various chemical reactions, the approach becomes virtually universal, allowing both various surfaces and end-functionalized macromolecules to be used in the grafted layer synthesis. PET

  5. Changing the warm-up transition of macromolecular system at irradiation

    International Nuclear Information System (INIS)

    Full text: The whole complex of characteristics of macromolecular system is defined by its warm-up condition. So for revealing a consequence of irradiating it is necessary study of warm-up turning the molecules of chain construction from the energy of irradiation. As is well known an irradiation is accompanied by suturing or destruction of separate kinetic units. In given work is studied changing a warm-up interval of high-elastic state of macromolecular system depending on energy of irradiating for the reason extrapolation its results to deciding the applied problems of ecological, metabolically processes. Coming from theories free volume and Boltzmann's distribution were determined changing the temperatures of glassing and viscous current. The variable parameter considered models is a mobility factor, which is defined as an attitude radiation energy to energy of Van-der-Waals interactions and hydrogen bonds, where energy of irradiation is taken much less, than energy of chemical bond. Restriction of energy of inter- and intramolecular chemical unbound kinetic units guarantees wholeness of the macromolecular chains that it is required for functional quality conservations. The obtained results show that than more deflection of mobility factor from units, that broader area high-elastic considered model of macromolecular system. Changing a warm-up interval also enough vastly depends on the free member of deciding, which characterizes a condition of polymer before the irradiation. Rendered that the most vulnerable to irradiating is hard chain macromolecular system

  6. Macrophage migration inhibitory factor induces vascular leakage via autophagy

    Directory of Open Access Journals (Sweden)

    Hong-Ru Chen

    2015-01-01

    Full Text Available Vascular leakage is an important feature of acute inflammatory shock, which currently has no effective treatment. Macrophage migration inhibitory factor (MIF is a pro-inflammatory cytokine that can induce vascular leakage and plays an important role in the pathogenesis of shock. However, the mechanism of MIF-induced vascular leakage is still unclear. In this study, using recombinant MIF (rMIF, we demonstrated that MIF induced disorganization and degradation of junction proteins and increased the permeability of human endothelial cells in vitro. Western blotting analysis showed that rMIF treatment induced LC3 conversion and p62 degradation. Inhibition of autophagy with a PI3K inhibitor (3-MA, a ROS scavenger (NAC or autophagosomal-lysosomal fusion inhibitors (bafilomycin A1 and chloroquine rescued rMIF-induced vascular leakage, suggesting that autophagy mediates MIF-induced vascular leakage. The potential involvement of other signaling pathways was also studied using different inhibitors, and the results suggested that MIF-induced vascular leakage may occur through the ERK pathway. In conclusion, we showed that MIF triggered autophagic degradation of endothelial cells, resulting in vascular leakage. Inhibition of MIF-induced autophagy may provide therapeutic targets against vascular leakage in inflammatory shock.

  7. Leakage-Resilient Cryptography from the Inner-Product Extractor

    DEFF Research Database (Denmark)

    Dziembowski, Stefan; Faust, Sebastian

    2011-01-01

    We present a generic method to secure various widely-used cryptosystems against arbitrary side-channel leakage, as long as the leakage adheres three restrictions: first, it is bounded per observation but in total can be arbitrary large. Second, memory parts leak independently, and, third, the ran...

  8. 42 CFR 84.123 - Exhalation valve leakage test.

    Science.gov (United States)

    2010-10-01

    ... 42 Public Health 1 2010-10-01 2010-10-01 false Exhalation valve leakage test. 84.123 Section 84.123 Public Health PUBLIC HEALTH SERVICE, DEPARTMENT OF HEALTH AND HUMAN SERVICES OCCUPATIONAL SAFETY....123 Exhalation valve leakage test. (a) Dry exhalation valves and valve seats will be subjected to...

  9. An observed 20 yr time-series of Agulhas leakage

    Directory of Open Access Journals (Sweden)

    D. Le Bars

    2014-01-01

    Full Text Available We provide a time series of Agulhas leakage anomalies over the last twenty years from satellite altimetry. Until now, measuring the interannual variability of Indo-Atlantic exchange has been the major barrier in the investigation of the dynamics and large scale impact of Agulhas leakage. We compute the difference of transport between Agulhas Current and Agulhas Return Current which allows to deduce Agulhas leakage. The main difficulty is to separate the Agulhas Return Current from the southern limb of the subtropical "supergyre" south of Africa. For this purpose, an algorithm that uses absolute dynamic topography data is developed. The algorithm is applied to a state-of-the-art ocean model. The comparison with a Lagrangian method to measure the leakage allows to validate the new method. An important result is that it is possible to measure Agulhas leakage in this model using the velocity field along a section that crosses both the Agulhas Current and the Agulhas Return Current. In the model a good correlation is found between measuring leakage using the full depth velocities and using only the surface geostrophic velocities. This allows us to extend the method to along-track absolute dynamic topography from satellites. It is shown that the accuracy of the mean dynamic topography does not allow to determine the mean leakage but that leakage anomalies can be accurately computed.

  10. 46 CFR 98.30-15 - Leakage containment.

    Science.gov (United States)

    2010-10-01

    ... 46 Shipping 4 2010-10-01 2010-10-01 false Leakage containment. 98.30-15 Section 98.30-15 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) CARGO AND MISCELLANEOUS VESSELS SPECIAL... Leakage containment. (a) No person may transfer a product to or from a vessel unless there is a...

  11. Synthesis and characterization of miktoarm star copolymer of styrene and butadiene using multifunctional macromolecular initiator

    Institute of Scientific and Technical Information of China (English)

    Hai Yan Zhang; Xing Ying Zhang

    2009-01-01

    A new kind of multifunctional macromolecular initiator with Sn-C bonds and polydiene arms was synthesized by living anionic polymerization.At first,polydiene-stannum chloride(PD-SnCl3)was prepared by the reaction of n-butyl-Li(n-BuLi),stannic chloride(SnCl4)and diene.Then PD-SnCl3 was used to react with the dilithium initiator to prepare the multifunctional organic macromolecular initiators.The result suggested that the initiators had a remarkable yield by GPC,nearly 90%.By using these multifunctional macromolecular initiators,styrene and butadiene were effectively polymerized via anionic polymerization,which gave birth to novel miktoarm star copolymers.The relative molecular weight and polydispersity index,microstructure contents,copolymerization components,glass transition temperature(Tg)and morphology of the miktoarm star copolymers were investigated by GPC-UV,1H NMR,DSC and TEM,respectively.

  12. Leakage-Aware Modulo Scheduling for Embedded VLIW Processors

    Institute of Scientific and Technical Information of China (English)

    Yong Guan; Jingling Xue

    2011-01-01

    As semi-conductor technologies move down to the nanometer scale, leakage power has become a significant component of the total power consumption. In this paper, we present a leakage-aware modulo scheduling algorithm to achieve leakage energy saving for applications with loops on Very Long Instruction Word (VLIW) architectures. The proposed algorithm is designed to maximize the idleness of function units integrated with the dual-threshold domino logic, and reduce the number of transitions between the active and sleep modes. We have implemented our technique in the Trimaran compiler and conducted experiments using a set of embedded benchmarks from DSPstone and Mibench on the cycle-accurate VLIW simulator of Trimaran. The results show that our technique achieves significant leakage energy saving compared with a previously published DAG-based (Directed Acyclic Graph) leakage-aware scheduling algorithm.

  13. Technology Solutions Case Study: Predicting Envelope Leakage in Attached Dwellings

    Energy Technology Data Exchange (ETDEWEB)

    None

    2013-11-01

    The most common method of measuring air leakage is to perform single (or solo) blower door pressurization and/or depressurization test. In detached housing, the single blower door test measures leakage to the outside. In attached housing, however, this “solo” test method measures both air leakage to the outside and air leakage between adjacent units through common surfaces. In an attempt to create a simplified tool for predicting leakage to the outside, Building America team Consortium for Advanced Residential Buildings (CARB) performed a preliminary statistical analysis on blower door test results from 112 attached dwelling units in four apartment complexes. Although the subject data set is limited in size and variety, the preliminary analyses suggest significant predictors are present and support the development of a predictive model. Further data collection is underway to create a more robust prediction tool for use across different construction types, climate zones, and unit configurations.

  14. Insulator Contamination Forecasting Based on Fractal Analysis of Leakage Current

    Directory of Open Access Journals (Sweden)

    Bing Luo

    2012-07-01

    Full Text Available In this paper, an artificial pollution test is carried out to study the leakage current of porcelain insulators. Fractal theory is adopted to extract the characteristics hidden in leakage current waveforms. Fractal dimensions of the leakage current for the security, forecast and danger zones are analyzed under four types of degrees of contamination. The mean value and the standard deviation of the fractal dimension in the forecast zone are calculated to characterize the differences. The analysis reveals large differences in the fractal dimension of leakage current under different contamination discharge stages and degrees. The experimental and calculation results suggest that the fractal dimension of a leakage current waveform can be used as a new indicator of the discharge process and contamination degree of insulators. The results provide new methods and valid indicators for forecasting contamination flashovers.

  15. Energy losses by air leakage in condensing tumble dryers

    International Nuclear Information System (INIS)

    Tumble dryers, used for the drying of textiles, consume a considerable amount of electricity due to the large number of dryers in use. A large amount of this electricity is produced from coal, making it important to reduce the electricity use and, hence, the carbon dioxide emissions. Earlier studies made on the condensing tumble dryer have pointed out that leakage is one of the parameters affecting the electricity use for the drying process. With a view to reducing the energy use, leakage was estimated through measurements and modelling. Energy balances were used in order to verify the leakage. The energy balance showed good agreement with the results from the model and confirms that the leakage out from the dryer arises mainly between the heater and the drum where the air is hot and has low relative humidity. Large leakage at this location is detrimental for the energy efficiency of the dryer, meaning that the leakage must be reduced in order to obtain a reduced energy use. Results from the model also point out that even small changes in the size of gaps, or changes to the pressure in the internal system, result in a significant change in leakage from the dryer. - Highlights: ► Energy balances and fluid mechanics modelling have been performed on a tumble dryer. ► Main leakage of drying gas was found between the heater and the drum of the dryer. ► Leakage at this location has a large impact on the energy efficiency. ► Both energy balances and modelling strengthens the assumption of leakage location.

  16. Effect of macromolecular crowding on the rate of diffusion-limited enzymatic reaction

    Indian Academy of Sciences (India)

    Manish Agrawal; S B Santra; Rajat Anand; Rajaram Swaminathan

    2008-08-01

    The cytoplasm of a living cell is crowded with several macromolecules of different shapes and sizes. Molecular diffusion in such a medium becomes anomalous due to the presence of macromolecules and diffusivity is expected to decrease with increase in macromolecular crowding. Moreover, many cellular processes are dependent on molecular diffusion in the cell cytosol. The enzymatic reaction rate has been shown to be affected by the presence of such macromolecules. A simple numerical model is proposed here based on percolation and diffusion in disordered systems to study the effect of macromolecular crowding on the enzymatic reaction rates. The model qualitatively explains some of the experimental observations.

  17. Effect of macromolecular polymer structures on drag reduction in a turbulent channel flow

    International Nuclear Information System (INIS)

    This paper presents the influence of injected polymer solutions on turbulence in fully developed channel flows. In particular, it investigates the impact of concentration and mixing of the polymer solution on drag reduction. It is observed, via flow visualization and birefringence measurements, that for large injection concentrations macromolecular polymer structures exist in the flow. They are found to be mostly located in the neighborhood of the channel centerline. Laser Doppler velocimetry was used to characterize the mean and turbulent flow with and without the presence of macromolecular polymer structures

  18. Dipole leakage and low CMB multipoles

    International Nuclear Information System (INIS)

    A number of studies of WMAP-7 have highlighted that the power at the low multipoles in CMB power spectrum is lower than their theoretically predicted value. Angular correlation between the orientations of these low multipoles have also been discovered. While these observations may have cosmological ramification, it is important to investigate possible observational artifacts that can mimic them. The CMB dipole, which is much higher than the quadrupole, can get leaked to the higher multipoles due to the non-circular beam of the CMB experiment. In this paper, an analytical method has been developed and simulations are carried out to study the effect of the non-circular beam on power leakage from the dipole. It has been shown that the small, but non-negligible power from the dipole can get transferred to the quadrupole and the higher multipoles due to the non-circular beam. Simulations have also been carried out for Planck scan strategy, and comparative results between WMAP and Planck have been presented

  19. Dipole leakage and low CMB multipoles

    CERN Document Server

    Das, Santanu

    2012-01-01

    A number of studies of WMAP-7 have highlighted that the power at the low multipoles in CMB power spectrum are lower than their theoretically predicted values. Angular correlation between the orientations of these low multipoles have also been discovered. While these observations may have cosmological ramification, it is important to investigate possible observational artifacts that can mimic them. The CMB dipole which is almost 550 times higher than the quadrupole can get leaked to the higher multipoles due to the non-circular beam of the CMB experiment. In this paper an analytical method has been developed and simulations are carried out to study the effect of the non-circular beam on power leakage from the dipole. It has been shown that the small, but non-negligible power from the dipole can get transferred to the quadrupole and the higher multipoles due to the non-circular beam. Simulations have also been carried out for Planck scan strategy and comparative results between WMAP and Planck have been present...

  20. Information Leakage Prevention Using Virtual Disk Drive

    Directory of Open Access Journals (Sweden)

    Tarek S. Sobh

    2013-06-01

    Full Text Available The worst news for information technology people are computer has been stolen or lost. The actual problem is the loss of the data stored on the hard drive that can fall into the wrong hands. However, users of information system and laptops computers are facing real problems with due to intruders using attack techniques when they are connected to the network and lost or stolen computers. In order to protect your organization against information leakage you should encrypt this data by only allowing the user with access to the encryption key to view the data, authorized application usage, and control who gets access to specific types of data. This work focuses on confidentiality of secure information storage. In addition, it presents the model to create of a Virtual Disk Drive (VDD on MS Windows, that appear to the user (after the mounting process as hard disks, but that are really stored as ciphered files on a file system. The proposed VDD prevents dictionary attacks and brute force attacks by incorporating a CAPTCHA (Completely Automated Public Turing test to tell Computers and Humans Apart in the login mechanism. The authentication method for the VDD login is based upon a 3-D image CAPTCHA. All components of this work are integrated in one security VDD tool called "SecDisk".

  1. Analysis of leakage areas in pipes

    International Nuclear Information System (INIS)

    In order to facilitate a realistic approximation of jet forces due to longitudinal cracks in pipes under pressure and its variation with time, exact calculations of leakage area and cracks border form during opening, are required. Complex phenomena of dynamic plastification and depressurisation of the system have to be taken in consideration. The opening areas of longitudinal cracks are computed by an elastic-plastic large displacement dynamic finite element analysis using the general purpose program MARC. Results of these analyses are compared with experimental data. Plots showing the variation with time of displacements and stresses are presented. Three finite element models, from simple to complex geometries, are presented. Changing boundary conditions and time steps are explained. Fracture mechanics parameters (J-Integral) are computed around the crack tip. These values are compared with experimental data in order to show the tendency of the crack to propagate or to arrest. The longest stable crack is calculated for each Finite Element Model. Elastic-plastic dynamic phenomena of a running crack in a pipe under pressure are presented, and its computation with an elastic-plastic large displacement dynamic finite element program is explained

  2. Analysis of leakage areas in pipes

    International Nuclear Information System (INIS)

    In order to facilitate a realistic approximation of jet forces due to longitudinal cracks in pipes under pressure and its variation with time, exact calculations of leakage and cracks border form during opening, are required. Complex phenomena of dynamic plastification and depressurization of the system have to be taken into consideration. The opening areas of longitudinal cracks are computed by an elastic-plastic large displacement dynamic finite element analysis using in the general purpose program MARC. Results of these analyses are compared with experimental data. Plots showing the variation with time of displacements and stresses are presented. Three finite element models, from simple to complex geometries, are presented. Changing boundary conditions and time steps are explained. Fracture mechanics parameters (J-integral) are computed around the crack tip. These values are compared with experimental data in order to show the tendency pf the crack to propagate or to arrest. The longest stable crack is calculated for each Finite Element Model. Elastic-plastic dynamic phenomena of a running crack in a pipe under pressure are presented, and its computation with an elastic-plastic large displacement dynamic finite element program is explained. (Auth.)

  3. Leakage experiences with 1 MW steam generator

    International Nuclear Information System (INIS)

    An 1 MW steam generator was tested from October, 1971 and completed with the first series of experiments by May, 1972 after 3600 hours of operation. During these tests, unextraordinary heat absorption was experienced in the downcomer region, which led to shortage of heat transfer area to attain the rated steam temperature and to one of the reasons of flow instabilities. The steam generator was disassembled to get test pieces for structure as well as material examinations and then it was reassembled to proceed the second series of tests. Before it was done, a modification was provided to insulate the downcomer region by putting a gas space around the downcomer tube. The gas space was provided by a dual tube and spacers were welded on the inner tube and an end plate was welded on upper parts between the two to seal the gap by means of fillet welding. After the modified steam generator was put into operation, water happened to leak into a sodium side two times through these additional welding spots for the gas insulation. This paper presents operating conditions and behaviors of monitors at the time of the leakages, identifications of leaked spots, an evaluation of causes and a treatment or a precaution for them

  4. Novel Sleep Transistor Techniques for Low Leakage Power Peripheral Circuits

    Directory of Open Access Journals (Sweden)

    Rajani H.P

    2012-09-01

    Full Text Available Static power consumption is a major concern in nanometre technologies. Along with technology scaling down and higher operating speeds of CMOS VLSI circuits, the leakage power is getting enhanced. As process geometries are becoming smaller, device density increases and threshold voltage as well as oxide thickness decrease to keep pace with performance. Two novel circuit techniques for leakage current reduction in inverters with and without state retention property are presented in this work. The powerdissipation during inactive (standby mode of operation can be significantly reduced compared to traditional power gating methods by these circuit techniques. The proposed circuit techniques are applied to inverters and the results are compared with earlier inverter leakage minimization techniques. Inverter buffer chains are designed using new state retention low leakage technique and found to be dissipatinglower power with state retention. All low leakage inverters are designed and simulated in cadence design environment using 90 nm technology files. The leakage power during sleep mode is found to be better by X 63 times for novel method. The total power dissipation has also reduced by a factor of X 3.5, compared to earlier sleepy keeper technique. The state retention feature is also good compared to earlier leakage power reduction methodologies.

  5. Leakage pattern of linear accelerator treatment heads from multiple vendors

    International Nuclear Information System (INIS)

    Full text: Patient life expectancy post-radiotherapy is becoming longer. Therefore, secondary cancers caused by radiotherapy treatment have more time to develop. Increasing attention is being given to out-of-field dose resulting from scatter and accelerator head leakage. Dose leakage from equivalent positions on Varian600C, Varian21-X, Siemens Primus and Elekta Synergy-II linacs were measured with TLD 100H dosimeter chips and compared. Treatment parameters such as field size and beam energy were altered. Leakage doses are presented as a percentage of the dose to isocentre (5 Gy). Results illustrate significant variations in leakage dose between linac models where no model emits consistently lower amounts of radiation leakage for all treatment parameters. Results are shown below. Leakage through the collimator assembly in different units is varying as a function of location and unit design by more than a factor of 10. Differences are more pronounced in comparing Varian or Elekta models, which are fitted with an additional collimator separate from the MLC leaves, to the Siemens model, which uses MLC leaves as its only secondary collimator. Further measurements are currently being taken at the patient plane with a directional detector system to determine the spatial distribution of high leakage sources.

  6. Leakage characterization of a piloted power operated relief valve

    International Nuclear Information System (INIS)

    In Westinghouse Pressurized Water Reactors (PWRs), power operated relief valves (PORVs) are used to provide overpressure protection of the Pressurizer. The valves are fail closed globe valves which means that power is required to open the valves and, on loss of power, the valves close. There are two ways to operate the PORVs. The more common way is to directly couple the disc to an actuator via a disc-stem assembly. The type of design is not the object of this paper. The other and less common way of operating a PORV is by piloting the main valve such that the opening or closing of a pilot valve opens and closes the main valve. This is the design of interest. In most plants, the PORVs are installed with a water loop seal while in some plants no water loop seals are used. It is generally accepted that loop seal installation minimizes valve seat leakage. In non-loop seal installation, the valve seat is exposed to steam which increases the potential for seat leakage. This paper describes the results of some tests performed with nitrogen and steam to characterize the leakage potential of a pilot operated PORV. The test results were compared with seat leakage tests of check valves to provide insight on the leakage testing of pilot operated valves and check valves. The paper also compares the test data with leakage estimates using the ASME/ANSI OM Code guidance on valve leakage

  7. Influence of specimen velocity on the leakage signal in magnetic flux leakage type nondestructive testing

    CERN Document Server

    Zhang, Lintao; Cameron, Ian; Sienz, Johann; Boat, Matthew; Pearson, Neil

    2015-01-01

    We investigate the influence of the specimen velocity on the magnetic flux leakage with the aim of selecting the optimum sensor locations. Parametric numerical simulations where the specimen velocity was in the range [0.1-20] m$\\cdot$s$^{-1}$ were carried out. As the specimen velocity is increased, the magnetic field varies from being symmetrical to being asymmetric. For the radial magnetic induction, the peak to peak value moves from the centre of the bridge towards the direction of the specimen movement. For the axial magnetic induction, the specimen velocity influence is dependent on the sensor location and a signal-velocity independent region was discussed.

  8. Theory and Practice of a Leakage Resilient Masking Scheme

    DEFF Research Database (Denmark)

    Balasch, Josep; Faust, Sebastian; Gierlichs, Benedikt;

    2012-01-01

    A recent trend in cryptography is to formally prove the leakage resilience of cryptographic implementations – that is, one formally shows that a scheme remains provably secure even in the presence of side channel leakage. Although many of the proposed schemes are secure in a surprisingly strong...... model, most of them are unfortunately rather inefficient and come without practical security evaluations nor implementation attempts. In this work, we take a further step towards closing the gap between theoretical leakage resilient cryptography and more practice-oriented research. In particular, we...

  9. Bruce 'A' Unit 4 fuel channel feeder coupling leakage

    International Nuclear Information System (INIS)

    CANDU reactor fuel channels are connected to the primary heat transport system by mechanical joints known as feeder couplings. In 1991, three feeder coupling leakages were discovered in Bruce 4. These leakages required the unit to be shut down for repair. An investigation showed that the leakage was caused by a small 'separation' at the couplings. The assessment was that this was unlikely to be a generic issue, because the later reactors have stronger capscrews. At the time of the conference, further improvements were being considered for the seal ring and capscrew materials, and more accurate capscrew preload measurements. 3 tabs., 10 figs

  10. Interplay between the bacterial nucleoid protein H-NS and macromolecular crowding in compacting DNA

    NARCIS (Netherlands)

    Wintraecken, C.H.J.M.

    2012-01-01

      In this dissertation we discuss H-NS and its connection to nucleoid compaction and organization. Nucleoid formation involves a dramatic reduction in coil volume of the genomic DNA. Four factors are thought to influence coil volume: supercoiling, DNA charge neutralization, macromolecular crow

  11. A vibrating membrane bioreactor (VMBR): Macromolecular transmission-influence of extracellular polymeric substances

    DEFF Research Database (Denmark)

    Beier, Søren; Jonsson, Gunnar Eigil

    2009-01-01

    The vibrating membrane bioreactor (VMBR) system facilitates the possibility of conducting a separation of macromolecules (BSA) from larger biological components (yeast cells) with a relatively high and stable macromolecular transmission at sub-critical flux. This is not possible to achieve for a...

  12. The interplay of intrinsic disorder and macromolecular crowding on α-synuclein fibril formation

    Science.gov (United States)

    Shirai, Nobu C.; Kikuchi, Macoto

    2016-02-01

    α-synuclein (α-syn) is an intrinsically disordered protein which is considered to be one of the causes of Parkinson's disease. This protein forms amyloid fibrils when in a highly concentrated solution. The fibril formation of α-syn is induced not only by increases in α-syn concentration but also by macromolecular crowding. In order to investigate the coupled effect of the intrinsic disorder of α-syn and macromolecular crowding, we construct a lattice gas model of α-syn in contact with a crowding agent reservoir based on statistical mechanics. The main assumption is that α-syn can be expressed as coarse-grained particles with internal states coupled with effective volume; and disordered states are modeled by larger particles with larger internal entropy than other states. Thanks to the simplicity of the model, we can exactly calculate the number of conformations of crowding agents, and this enables us to prove that the original grand canonical ensemble with a crowding agent reservoir is mathematically equivalent to a canonical ensemble without crowding agents. In this expression, the effect of macromolecular crowding is absorbed in the internal entropy of disordered states; it is clearly shown that the crowding effect reduces the internal entropy. Based on Monte Carlo simulation, we provide scenarios of crowding-induced fibril formation. We also discuss the recent controversy over the existence of helically folded tetramers of α-syn, and suggest that macromolecular crowding is the key to resolving the controversy.

  13. Detection and cellular localisation of the synthetic soluble macromolecular drug carrier pHPMA

    Czech Academy of Sciences Publication Activity Database

    Kissel, M.; Peschke, P.; Šubr, Vladimír; Ulbrich, Karel; Strunz, A. M.; Kühnlein, R.; Debus, J.; Friedrich, E.

    2002-01-01

    Roč. 29, č. 8 (2002), s. 1055-1062. ISSN 1619-7070 R&D Projects: GA ČR GV307/96/K226 Institutional research plan: CEZ:AV0Z4050913 Keywords : EPR effect * Radiolabelled macromolecules * Pharmacokinetic Subject RIV: CD - Macromolecular Chemistry Impact factor: 3.568, year: 2002

  14. Developing genetic tools to exploit Chaetomium thermophilum for biochemical analyses of eukaryotic macromolecular assemblies

    OpenAIRE

    Nikola Kellner; Johannes Schwarz; Miriam Sturm; Javier Fernandez-Martinez; Sabine Griesel; Wenzhu Zhang; Chait, Brian T.; Rout, Michael P.; Ulrich Kück; Ed Hurt

    2016-01-01

    We describe a method to genetically manipulate Chaetomium thermophilum, a eukaryotic thermophile, along with various biochemical applications. The transformation method depends on a thermostable endogenous selection marker operating at high temperatures combined with chromosomal integration of target genes. Our technique allows exploiting eukaryotic thermophiles as source for purifying thermostable native macromolecular complexes with an emphasis on the nuclear pore complex, holding great pot...

  15. An Investigation of Leakage Current and Partial Discharge For

    Directory of Open Access Journals (Sweden)

    Arkan A. Hussain

    2013-05-01

    Full Text Available High voltage insulators used in various overhead forms are exposed to leakage current and partial discharge.This work deals with different structure forms of insulator, such as (pin post, clamp top and tie top. These structures are applied in different tests, as covered and stripped states. The leakage current for these forms were measured by raising the insulator voltage to (5.25, 6.35, 7.57 kV for covered and stripped state. Partial discharges were determined in covered and stripped state of these insulator forms using (straight and balanced detection method.Pin post insulators have a leakage current and electric field larger than both clamp top and tie top. The clamp top and tie top insulator show almost the same value of leakage current measurements.The stripped conductors always produce large partial discharge than covered conductor.

  16. Competitiveness and carbon leakages in industry under asymmetric climate policy

    International Nuclear Information System (INIS)

    This research aims at studying how to predict competitiveness loss for an industry submitted to an asymmetric carbon constraint, and carbon leakages, whether high losses and important leakages might be feared, and which policies can be used to mitigate these losses and escapes. The author analyses and comments the content of four articles dealing with: the impact on competitiveness, revenue distribution and economic efficiency of a change in the allocation rules for EU greenhouse gas allowances; the relationship between allocation of CO2 allowances and competitiveness in the case of the European iron and steel industry; CO2 abatement, competitiveness and leakage in the European cement industry under EU ETS; and leakage from climate policies and border tax adjustment (lessons from a geographic model of the cement industry). Then, the author combines several approaches to study the cement and steel industries

  17. Numerical simulation of piston leakage over hermetic reciprocating compressors behavior.

    OpenAIRE

    Rigola Serrano, Joaquim; Pérez Segarra, Carlos David; Oliva Llena, Asensio

    2009-01-01

    Instantaneous flow leakage between piston and cylinder is numerically evaluated. Reynolds equation is solved to calculate the pressure leakage distribution through the piston in the compressor. Piston movement inside the cylinder is simulated from kinematic analysis of the connecting rod mechanical system and the respective force balances. An updated version of this model is here presented for different working range compressors and fluid refrigerants compressor chamber pressures distribution...

  18. Novel Sleep Transistor Techniques for Low Leakage Power Peripheral Circuits

    OpenAIRE

    Rajani H.P; Srimannarayan Kulkarni

    2012-01-01

    Static power consumption is a major concern in nanometre technologies. Along with technology scaling down and higher operating speeds of CMOS VLSI circuits, the leakage power is getting enhanced. As process geometries are becoming smaller, device density increases and threshold voltage as well as oxide thickness decrease to keep pace with performance. Two novel circuit techniques for leakage current reduction in inverters with and without state retention property are presented in this work. T...

  19. Risk of Leakage versus Depth of Injection in Geological Storage

    OpenAIRE

    Celia, Michael A.; Nordbotten, Jan Martin; Bachu, Stefan; Dobossy, Mark E.; Court, Benjamin

    2009-01-01

    One of the outstanding challenges for large-scale CCS operations is to develop reliable quantitative risk assessments with a focus on leakage of both injected CO2 and displaced brine. A critical leakage pathway is associated with the century-long legacy of oil and gas exploration and production, which has led to many millions of wells being drilled. Many of those wells are in locations that would otherwise be excellent candidates for CCS operations, especially across many parts of North Ameri...

  20. The economic sustainability of tourism growth through leakage calculation

    OpenAIRE

    Garrigós Simón, Fernando José; Galdón Salvador, José Luis; Gil Pechuán, Ignacio

    2015-01-01

    The development and growth of tourism depend on its sustainability over time and on its benefits for destinations as a whole. However, calculating sustainability is not an easy task. This article focuses on the economic sustainability of tourism growth and, after an exhaustive review of the literature, proposes a quantitative mathematical model to measure it by analysing and calculating leakage in the hotel sector. Leakage analyses the amount of revenue generated by tourists that does not rem...

  1. Experimental method for investigating air leakage in rodless cylinders

    OpenAIRE

    Mazza, Luigi; Belforte, Guido; Ivanov, Alexandre

    2013-01-01

    The paper presents a test method for evaluating air leakage in rodless cylinders with longitudinal slot and sealing band. To this aim a specific test rig was developed in order to carry out leakage tests under different operating conditions. Specifically, the performance of the sealing system consisting of the band, seal, and barrel is analyzed, identifying the critical conditions and factors that influence operation. Particular importance was assigned to selecting band and seal cross-section...

  2. Leakage Power Reduction for Battery-Operated Portable Systems

    OpenAIRE

    Yasuura, Hiroto

    2003-01-01

    This paper addresses bitwidth optimization focusing on leakage power reduction for system-level low-power design. By means of tuning the design parameter, bitwidth tailored to a given application requirements, the datapath width of processors and size of memories are optimized resulting in significant leakage power reduction besides dynamic power reduction. Experimental results for several real embedded applications, show power reduction without performance penalty range from about 21.5% to 6...

  3. Reducing Dynamic Power and Leakage Power for Embedded Systems

    OpenAIRE

    Yasuura, Hiroto

    2002-01-01

    This paper presents a system-level technique for embedded processor-based systems targeting both dynamic power and leakage power reduction using datapath width optimization. By means of tuning the design parameter, datapath width tailored to a given application requirements, the processors and memories are optimized resulting in significant power reduction, not only for dynamic power but also for leakage power. In our experiments for several real embedded applications, power reduction without...

  4. Acute Alcohol Intoxication-Induced Microvascular Leakage

    Science.gov (United States)

    Doggett, Travis M.; Breslin, Jerome W.

    2014-01-01

    Background Alcohol intoxication can increase inflammation and worsen injury, yet the mechanisms involved are not clear. We investigated whether acute alcohol intoxication elevates microvascular permeability, and investigated potential signaling mechanisms in endothelial cells that may be involved. Methods Conscious rats received a 2.5 g/kg alcohol bolus via gastric catheters to produce acute intoxication. Microvascular leakage of intravenously administered FITC-albumin from the mesenteric microcirculation was assessed by intravital microscopy. Endothelial-specific mechanisms were studied using cultured endothelial cell monolayers. Transendothelial electrical resistance (TER) served as an index of barrier function, before and after treatment with alcohol or its metabolite acetaldehyde. Pharmacologic agents were used to test the roles of alcohol metabolism, oxidative stress, p38 mitogen-activated protein (MAP) kinase, myosin light chain kinase (MLCK), rho kinase (ROCK), and exchange protein activated by cAMP (Epac). VE-cadherin localization was investigated to assess junctional integrity. Rac1 and RhoA activation were assessed by ELISA assays. Results Alcohol significantly increased FITC-albumin extravasation from the mesenteric microcirculation. Alcohol also significantly decreased TER and disrupted VE-cadherin organization at junctions. Acetaldehyde significantly decreased TER, but inhibition of ADH or application of a superoxide dismutase mimetic failed to prevent alcohol-induced decreases in TER. Inhibition of p38 MAP kinase, but not MLCK or ROCK, significantly attenuated the alcohol-induced barrier dysfunction. Alcohol rapidly decreased GTP-bound Rac1 but not RhoA during the drop in TER. Activation of Epac increased TER, but did not prevent alcohol from decreasing TER. However, activation of Epac after initiation of alcohol-induced barrier dysfunction quickly resolved TER to baseline levels. Conclusions Our results suggest that alcohol intoxication increases

  5. Copper Ion as a New Leakage Tracer

    Directory of Open Access Journals (Sweden)

    Modaresi J.

    2013-12-01

    Full Text Available Statement of Problem: Most failures of root canal treatments are caused by bacteria. Studies showed that the most common cause of endodontic failures were the incomplete obturation of the root canal and the lack of adequate apical seal. Some in-vitro methods are used to estimate sealing quality, generally by measuring microleakage that allows the tracer agent to penetrate the filled canal.Purpose: Conventional methods of evaluating the seal of endodontically treated teeth are complicated and have some drawbacks. We used copper ion diffusion method to assess the leakage and the results were compared to dye penetration method.Materials and Method: The crowns of 21 extracted teeth were cut off at the CEJ level. After preparing the canals, the teeth were placed in tubes containing saline. They were divided randomly into 15 experimental cases; 3 positive and 3 negative controls. Positive controls were filled by single cone without sealer while the experimental and the negative control groups were filled by lateral technique. The coronal portion of gutta was removed and 9mm was left. The external surface of each tooth was coated with nail polish. Two millimeters of apical portion was immersed into 9ml of distilled water and 0.3ml of CuSO4 solution was injected into the coronal portion. After 2 days, copper sulfate was measured by an atomic absorption spectrophotometer. The teeth were then immersed in 2% methylene blue for 24 hours, sectioned and the extent of dye penetration was measured by a stereomicroscope.Results: The maximum and minimum recorded copper ion concentrations for the experimental group were 18.37 and 2.87ppm respectively. The maximum and minimum recorded dye penetrations for the experimental group were 8.5 and 3.5mm respectively. The statistical analysis, adopting paired samples test, showed poor correlation between average recorded results of two methods.Conclusion: Based on our results, there was no significant correlation between

  6. Leakage Power Reduction and Analysis of CMOS Sequential Circuits

    Directory of Open Access Journals (Sweden)

    M. Janaki Rani

    2012-02-01

    Full Text Available A significant portion of the total power consumption in high performance digital circuits in deep sub micron regime is mainly due to leakage power. Leakage is the only source of power consumption in an idle circuit. Therefore it is important to reduce leakage power in portable systems. In this paper two techniques such as transistor stacking and self-adjustable voltage level circuit for reducing leakage power in sequential circuits are proposed. This work analyses the power and delay of three different types of D flip-flops using pass transistors, transmission gates and gate diffusion input gates. . All the circuits are simulated with and without the application of leakage reduction techniques. Simulation results show that the proposed pass transistor based D flip-flop using self-adjustable voltage level circuit has the least leakage power dissipation of 9.13nW with a delay of 77 nS. The circuits are simulated with MOSFET models of level 54 using HSPICE in 90 nm process technology.

  7. International Market Leakage from China’s Forestry Policies

    Directory of Open Access Journals (Sweden)

    Xin Hu

    2014-11-01

    Full Text Available Carbon leakage can be a problem when seeking to reduce carbon emissions through forest policy. International market leakage is mainly caused by supply and demand imbalances in the timber market. This paper selects China, which is implementing forestry policy changes, as the research object. We begin by offering a brief analysis of China’s forestry policy changes, such as the logging quota and Six Key Forestry Programs to determine whether those policies affect timber supply. Second, through the use of three shock variables, carbon leakage is simulated under different scenarios by the Global Trade Analysis Project (GTAP model. The results reveal that the magnitude of leakage caused by implementing China’s forestry policies is between 79.7% and 88.8% with carbon leakage mainly displaced to Russia, Southeast Asia, and the EU. Two effective scenarios for reducing market leakage are presented: forest tenure reform and fast growing forest projects to improve domestic timber production, and raising tariffs on timber imports to reduce imports.

  8. Investigation of the leakage behaviour of reinforced concrete walls

    International Nuclear Information System (INIS)

    Information about the leakage behaviour of the containment in case of an accident is of decisive importance for the verification of nuclear power plant safety. Assuming a core melt accident with failure of the reactor vessel in a pressurized water reactor, high internal pressures accompanied by temperatures well over the water boiling temperature can occur. During loss of the primary coolant a large quantity of steam develops. In case of resulting cracks through the entire thickness of the pre-stressed containment wall without liner an air-steam mixture may be released. Regarding the leakage of pure air through cracked concrete walls there a couple of investigations introducing correlations based on crack width and pressure differential, like [7], [12] for instance. The leakage behaviour of water through cracked concrete walls has already been investigated as well [3],[9]. Investigations on the leakage steam and air through narrow, idealized cracks were performed in [1]. However, corresponding knowledge about the leakage of air-steam mixtures through real cracks was missing world-wide so far. The leakage observation can be divided in mechanical processes determining cracks through the wall and the thermo-hydraulic processes. The development of crack patterns and average crack widths can be calculated quite well using available numerical procedures like the finite element method. Contrary to the mechanical processes it's difficult to describe the parameters governing the thermo-hydraulic processes inside the cracks like roughness, temperature, heat transfer and condensation. Aim of the project was to analyse the thermo-hydraulic process of water-air leakage with condensation through known crack patterns. In contrast to other investigations on large scale model containments like MAEAVA, it was not intended to simulate the integral behaviour of the containment as a whole but of a representative section of the containment wall. (author)

  9. Drug-Free Macromolecular Therapeutics--A New Paradigm in Polymeric Nanomedicines.

    Science.gov (United States)

    Chu, Te-Wei; Kopeček, Jindřich

    2015-07-01

    This review highlights a unique research area in polymer-based nanomedicine designs. Drug-free macromolecular therapeutics induce apoptosis of malignant cells by the crosslinking of surface non-internalizing receptors. The receptor crosslinking is mediated by the biorecognition of high-fidelity natural binding motifs (such as antiparallel coiled-coil peptides or complementary oligonucleotides) that are grafted to the side chains of polymers or attached to targeting moieties against cell receptors. This approach features the absence of low-molecular-weight cytotoxic compounds. Here, we summarize the rationales, different designs, and advantages of drug-free macromolecular therapeutics. Recent developments of novel therapeutic systems for B-cell lymphomas are discussed, as well as relevant approaches for other diseases. We conclude by pointing out various potential future directions in this exciting new field. PMID:26191406

  10. Clustering procedures for the optimal selection of data sets from multiple crystals in macromolecular crystallography

    International Nuclear Information System (INIS)

    A systematic approach to the scaling and merging of data from multiple crystals in macromolecular crystallography is introduced and explained. The availability of intense microbeam macromolecular crystallography beamlines at third-generation synchrotron sources has enabled data collection and structure solution from microcrystals of <10 µm in size. The increased likelihood of severe radiation damage where microcrystals or particularly sensitive crystals are used forces crystallographers to acquire large numbers of data sets from many crystals of the same protein structure. The associated analysis and merging of multi-crystal data is currently a manual and time-consuming step. Here, a computer program, BLEND, that has been written to assist with and automate many of the steps in this process is described. It is demonstrated how BLEND has successfully been used in the solution of a novel membrane protein

  11. Extraction of cobalt ion from textile using a complexing macromolecular surfactant in supercritical carbon dioxide

    International Nuclear Information System (INIS)

    Cobalt ion under the form of cobalt nitrate is removed from a textile lab coat using supercritical carbon dioxide extraction. The process involves a macromolecular additive of well-defined architecture, acting both as a surfactant and a complexing agent. The extraction efficiency of cobalt reaches 66% when using a poly(1,1,2,2-tetrahydroperfluoro-decyl-acrylate-co-vinyl-benzylphosphonic diacid) gradient copolymer in the presence of water at 160 bar and 40 C. The synergy of the two additives, namely the copolymer and water which are useless if used separately, is pointed out. The potential of the supercritical carbon dioxide process using complexing macromolecular surfactant lies in the ability to modulate the complexing unit as a function of the metal as well as the architecture of the surface-active agent for applications ranging for instance from nuclear decontamination to the recovery of strategic metals. (authors)

  12. Quantification of Complex Topologies in Macromolecular and Nanoscale Structures using Small-Angle Scattering

    Science.gov (United States)

    Pradhan, Siddharth; Ramachandran, Ramanth; Rai, Durgesh; Beaucage, Gregory

    2012-02-01

    Polymers are characterized by molecular weight distribution, tacticity, block copolymer content and branch content and chain topology. The branch structure and particularly the topology of branched chains has remained a difficult characterization problem. Recently we have developed a scaling model that can be coupled with small-angle scattering to measure the average branch length, number of branches and branch-on-branch structure in macromolecules of complex topology. This method has been extended to understand the structure of two dimensional structures and crumpling in these macromolecular systems. We have explored a wide range of materials in this regard. This poster will give an overview of the current uses for the scaling model for macromolecular topology. References pertaining to this poster can be found at http://www.eng.uc.edu/˜gbeaucag/BranchingPapers.html.

  13. Pi sampling: a methodical and flexible approach to initial macromolecular crystallization screening

    International Nuclear Information System (INIS)

    Pi sampling, derived from the incomplete factorial approach, is an effort to maximize the diversity of macromolecular crystallization conditions and to facilitate the preparation of 96-condition initial screens. The Pi sampling method is derived from the incomplete factorial approach to macromolecular crystallization screen design. The resulting ‘Pi screens’ have a modular distribution of a given set of up to 36 stock solutions. Maximally diverse conditions can be produced by taking into account the properties of the chemicals used in the formulation and the concentrations of the corresponding solutions. The Pi sampling method has been implemented in a web-based application that generates screen formulations and recipes. It is particularly adapted to screens consisting of 96 different conditions. The flexibility and efficiency of Pi sampling is demonstrated by the crystallization of soluble proteins and of an integral membrane-protein sample

  14. Thermodynamics and kinetics of apoazurin folding under macromolecular crowding effect and chemical interference

    Science.gov (United States)

    Zegarra, Fabio; Cheung, Margaret

    2013-03-01

    Proteins fold in a cellular milieu crowded by different kinds of macromolecules. They exert volume exclusion impacting protein folding processes in vivo. Folding processes, however, has been studied by chemical denaturation under in vitro conditions. The impact of the two factors as an attempt to advance the understanding of folding mechanism in vivo is not understood. Here, we investigate the folding mechanisms of apoazurin affected by the macromolecular crowding and chemical interference by using coarse-grained molecular simulations. Crowding agents are modeled as hard-spheres and the chemical denaturation effects are implemented into an energy function of the side chain and backbone interactions. Protein folding stability, mechanism, and kinetics rates of apoazurin under chemical interference and macromolecular crowding conditions are being investigated. Supported by NSF, Molecular & Cellular Biosciences (MCB0919974).

  15. PIMADb: A Database of Protein–Protein Interactions in Huge Macromolecular Assemblies

    Science.gov (United States)

    Mathew, Oommen K.; Sowdhamini, Ramanathan

    2016-01-01

    Protein–protein interactions play a very important role in the process of cellular functionality. Intricate details about the interactions between the proteins in a macromolecular assembly are important to understand the function and significance of protein complexes. We are reporting about a database of protein–protein interactions in huge macromolecular assemblies (PIMADb) that records the intrinsic details of 189,532 interchain interactions in 40,049 complexes from the Protein Data Bank. These details include the results of the quantification and analysis of all the interactions in the complex. The availability of interprotomer interaction networks can enable the design of point mutation experiments. PIMADb can be accessed from the URL: http://caps.ncbs.res.in/pimadb PMID:27478368

  16. Effect of Component Mobility on the Properties of Macromolecular [2]Rotaxanes.

    Science.gov (United States)

    Chen, Zhen; Aoki, Daisuke; Uchida, Satoshi; Marubayashi, Hironori; Nojima, Shuichi; Takata, Toshikazu

    2016-02-18

    Macromolecular [2]rotaxanes comprising a polymer axle and crown ether wheel were synthesized to evaluate the effect of component mobility on the properties of the axle polymer, especially its crystallinity. Living ring-opening polymerization of δ-valerolactone with a pseudorotaxane initiator with a hydroxy group at the axle terminus was followed by end-capping with a bulky isocyanate. This yielded macromolecular [2]rotaxanes (M2Rs) possessing polyester axles of varying molecular weights. The crystallinity of the axle polymers of two series of M2Rs, with either fixed and movable components, was evaluated by differential scanning calorimetry. The results revealed that the effect of component mobility was significant in the fixed and movable M2Rs with a certain axle length, thus suggesting that the properties of the axle polymer depend on the mobility of the polyrotaxane components. PMID:26806916

  17. Characterization of wax as a potential diffraction intensity standard for macromolecular crystallography beamlines.

    Science.gov (United States)

    Brandao-Neto, J; Thompson, S P; Lennie, A R; Ferreira, F F; Tang, C C

    2010-01-01

    A number of commercially available waxes in the form of thin disc samples have been investigated as possible diffraction intensity standards for macromolecular crystallography synchrotron beamlines. Synchrotron X-ray powder diffraction measurements show that beeswax offers the best performance of these waxes owing to its polycrystallinity. Crystallographic lattice parameters and diffraction intensities were examined between 281 and 309 K, and show stable and predictable thermal behaviour. Using an X-ray beam of known incident flux at lambda = 1 A, the diffraction power of two strong Bragg reflections for beeswax were quantified as a function of sample thickness and normalized to 10(10) photons s(-1). To demonstrate its feasibility as a diffraction intensity standard, test measurements were then performed on a new third-generation macromolecular crystallography synchrotron beamline. PMID:20029111

  18. Leakage evaluation in the PCV (Primary Containment Vessel) using chemical and radiochemical data

    International Nuclear Information System (INIS)

    Keeping the reliability of nuclear power plant operation, the primary coolant leakage in the PCV is strictly restricted by the Technical Specifications. It is very important to detect an indication of leakage and estimate the source of leakage to provide countermeasures. Usually the indication of leakage will be detected by increase of drain flow in the PCV sump. There are some possibilities of leakage sources in the PCV, such as reactor water, main steam, condensate, feedwater and closed cooling water. The leakage source contain different chemical and radiochemical species. This means that the leakage source can be presumed and detected by using chemical information from the PCV atmosphere and sump water. To detect the leakage indication and the source quickly and exactly, the PCV Leakage Detection Expert System has been developed. This paper describes how to evaluate the leakage indication and source in the PCV by using chemical and radiochemical data. (author)

  19. Localized reconstruction of subunits from electron cryomicroscopy images of macromolecular complexes

    OpenAIRE

    Ilca, Serban L.; Kotecha, Abhay; Sun, Xiaoyu; Poranen, Minna M; Stuart, David I.; Huiskonen, Juha T.

    2015-01-01

    Electron cryomicroscopy can yield near-atomic resolution structures of highly ordered macromolecular complexes. Often however some subunits bind in a flexible manner, have different symmetry from the rest of the complex, or are present in sub-stoichiometric amounts, limiting the attainable resolution. Here we report a general method for the localized three-dimensional reconstruction of such subunits. After determining the particle orientations, local areas corresponding to the subunits can be...

  20. A Nonlinear Elasticity Model of Macromolecular Conformational Change Induced by Electrostatic Forces

    OpenAIRE

    Y. C. ZHOU; Holst, Michael; McCammon, J. Andrew

    2010-01-01

    In this paper we propose a nonlinear elasticity model of macromolecular conformational change (deformation) induced by electrostatic forces generated by an implicit solvation model. The Poisson-Boltzmann equation for the electrostatic potential is analyzed in a domain varying with the elastic deformation of molecules, and a new continuous model of the electrostatic forces is developed to ensure solvability of the nonlinear elasticity equations. We derive the estimates of electrostatic forces ...

  1. Macromolecular HPMA-based nanoparticles with cholesterol in solution and blood enviroment

    Czech Academy of Sciences Publication Activity Database

    Filippov, Sergey K.; Chytil, Petr; Vishnevetskaya, N.; Niebuur, B.-J.; Pánek, Jiří; Janoušková, Olga; Pilař, Jan; Starovoytova, Larisa; Bogomolova, Anna; Etrych, Tomáš; Ulbrich, Karel; Štěpánek, Petr; Papadakis, C. M.

    Dresden : Leibniz-Institut für Polymerforschung Dresden e.V. (IPF), 2015. 217 /BIO-P-073/. ISBN 978-3-936028-89-8. [European Polymer Federation Congress 2015. 21.06.2015-26.06.2015, Dresden] R&D Projects: GA ČR(CZ) GC15-10527J Institutional support: RVO:61389013 Keywords : HPMA * cholesterol * blood Subject RIV: CD - Macromolecular Chemistry

  2. Macromolecularly crowded in vitro microenvironments accelerate the production of extracellular matrix-rich supramolecular assemblies

    OpenAIRE

    Kumar, Pramod; Satyam, Abhigyan; Fan, Xingliang; Rodriguez, Brian J.; et al

    2015-01-01

    Therapeutic strategies based on the principles of tissue engineering by self-assembly put forward the notion that functional regeneration can be achieved by utilising the inherent capacity of cells to create highly sophisticated supramolecular assemblies. However, in dilute ex vivo microenvironments, prolonged culture time is required to develop an extracellular matrix-rich implantable device. Herein, we assessed the influence of macromolecular crowding, a biophysical phenomenon that regulate...

  3. From “Simple” DNA-Protein Interactions to the Macromolecular Machines of Gene Expression

    OpenAIRE

    von Hippel, Peter H.

    2007-01-01

    The physicochemical concepts that underlie our present ideas on the structure and assembly of the “macromolecular machines of gene expression” are developed, starting with the structure and folding of the individual protein and DNA components, the thermodynamics and kinetics of their conformational rearrangements during complex assembly, and the molecular basis of the sequence specificity and recognition interactions of the final assemblies that include the DNA genome. The role of diffusion i...

  4. PIMA: Protein-Protein interactions in Macromolecular Assembly - a web server for its Analysis and Visualization

    OpenAIRE

    Kaleeckal Mathew, Oommen; Sowdhamini, Ramanathan

    2016-01-01

    Protein-protein interactions are essential for the basic biological machinery of the cell. This is important for processes like protein synthesis, enzyme kinetics, molecular assembly and signal transduction. A high number of macromolecular structural complexes are known due to recent advances in structure determination techniques. Therefore, it is of interest to develop an interactive tool to objectively analyze large protein complexes. Hence, we describe the development and utility of a web ...

  5. Accurate macromolecular structures using minimal measurements from X-ray free-electron lasers

    OpenAIRE

    Hattne, Johan; Echols, Nathaniel; Tran, Rosalie; Kern, Jan; Gildea, Richard J.; Brewster, Aaron S.; Alonso-Mori, Roberto; Glöckner, Carina; Hellmich, Julia; Laksmono, Hartawan; Sierra, Raymond G.; Lassalle-Kaiser, Benedikt; Lampe, Alyssa; Han, Guangye; Gul, Sheraz

    2014-01-01

    X-ray free-electron laser (XFEL) sources enable the use of crystallography to solve three-dimensional macromolecular structures under native conditions and free from radiation damage. Results to date, however, have been limited by the challenge of deriving accurate Bragg intensities from a heterogeneous population of microcrystals, while at the same time modeling the X-ray spectrum and detector geometry. Here we present a computational approach designed to extract statistically...

  6. STUDY ON HYDROLYSIS OF MACROMOLECULAR GELATIN WITH ENZYMES IN COMBINATION MODE

    Institute of Scientific and Technical Information of China (English)

    Ya-qin Huang; Rui Guan; Ming-zhi Huang

    2004-01-01

    The enzymatic hydrolysis of macromolecular gelatin with AS1.398 neutral protease, bromelain and their combinations was studied by estimating the molecular weights of their hydrolytic products. It was discovered that the products hydrolyzed by using combination enzymes had lower molecular weight than those obtained by using single ones,and the kind of enzymes, their combination mode and addition sequence are effective ways to control the molecular weights of gelatin hydrolyzates.

  7. Definitions of terms relating to individual macromolecules, macromolecular assemblies, polymer solutions, and amorphous bulk polymers (IUPAC Recommendations 2014)

    Czech Academy of Sciences Publication Activity Database

    Stepto, R.; Chang, T.; Kratochvíl, Pavel; Hess, M.; Horie, K.; Sato, T.; Vohlídal, J.

    2015-01-01

    Roč. 87, č. 1 (2015), s. 71-120. ISSN 0033-4545 Institutional support: RVO:61389013 Keywords : amorphous polymers * bulk polymers * IUPAC Polymer Division Subject RIV: CD - Macromolecular Chemistry Impact factor: 2.492, year: 2014

  8. σ2R, a reciprocal-space measure of the quality of macromolecular electron-density maps

    International Nuclear Information System (INIS)

    A reciprocal-space measure of the quality of macromolecular crystallographic phases based on the variance of the local roughness of the map is presented. It has previously been shown that the presence of distinct regions of solvent and protein in macromolecular crystals leads to a high value of the standard deviation of local r.m.s. electron density and that this can in turn be used as a reliable measure of the quality of macromolecular electron-density maps [Terwilliger & Berendzen (1999a ▶). Acta Cryst. D55, 501–505]. Here, it is demonstrated that a similar measure, θR2, the variance of the local roughness of the electron density, can be calculated in reciprocal space. The formulation is suitable for rapid evaluation of macromolecular crystallographic phases, for phase improvement and for ab initio phasing procedures

  9. Border adjustment for European emissions trading: Competitiveness and carbon leakage

    International Nuclear Information System (INIS)

    Unilateral or sub-global policies to combat climate change are potentially sensitive to free-riding and carbon leakage. One way of dealing with carbon leakage and competitiveness is the imposition of border adjustment measures for competing imports, for example in the form of the obligation to importers of goods to purchase and surrender emissions allowances to the authorities when importing. In this paper, we explore some implications of border adjustment measures in the EU ETS, for sectors that might be subject to carbon leakage. We examine the implications of two variants of these measures on the competitiveness of these sectors and on the global environment with the help of a multi-sector, multi-region computable general equilibrium (CGE) model of the global economy. Our calculations suggest that border adjustment might reduce the sectoral rate of leakage of the iron and steel industry rather forcefully, but that the reduction would be less for the mineral products sector, including cement. The reduction of the overall or macro rate of leakage would be modest. So, from an environmental point of view border tax adjustments would not be a very effective policy measure, but might mainly be justified by considerations of sectoral competitiveness.

  10. Border adjustment for European emissions trading: Competitiveness and carbon leakage

    Energy Technology Data Exchange (ETDEWEB)

    Kuik, Onno, E-mail: onno.kuik@ivm.vu.n [Institute for Environmental Studies, VU University Amsterdam, De Boelelaan 1085, 1081 HV Amsterdam (Netherlands); Hofkes, Marjan [Institute for Environmental Studies, VU University Amsterdam, De Boelelaan 1085, 1081 HV Amsterdam (Netherlands)

    2010-04-15

    Unilateral or sub-global policies to combat climate change are potentially sensitive to free-riding and carbon leakage. One way of dealing with carbon leakage and competitiveness is the imposition of border adjustment measures for competing imports, for example in the form of the obligation to importers of goods to purchase and surrender emissions allowances to the authorities when importing. In this paper, we explore some implications of border adjustment measures in the EU ETS, for sectors that might be subject to carbon leakage. We examine the implications of two variants of these measures on the competitiveness of these sectors and on the global environment with the help of a multi-sector, multi-region computable general equilibrium (CGE) model of the global economy. Our calculations suggest that border adjustment might reduce the sectoral rate of leakage of the iron and steel industry rather forcefully, but that the reduction would be less for the mineral products sector, including cement. The reduction of the overall or macro rate of leakage would be modest. So, from an environmental point of view border tax adjustments would not be a very effective policy measure, but might mainly be justified by considerations of sectoral competitiveness.

  11. Border adjustment for European emissions trading. Competitiveness and carbon leakage

    International Nuclear Information System (INIS)

    Unilateral or sub-global policies to combat climate change are potentially sensitive to free-riding and carbon leakage. One way of dealing with carbon leakage and competitiveness is the imposition of border adjustment measures for competing imports, for example in the form of the obligation to importers of goods to purchase and surrender emissions allowances to the authorities when importing. In this paper, we explore some implications of border adjustment measures in the EU ETS, for sectors that might be subject to carbon leakage. We examine the implications of two variants of these measures on the competitiveness of these sectors and on the global environment with the help of a multi-sector, multi-region computable general equilibrium (CGE) model of the global economy. Our calculations suggest that border adjustment might reduce the sectoral rate of leakage of the iron and steel industry rather forcefully, but that the reduction would be less for the mineral products sector, including cement. The reduction of the overall or macro rate of leakage would be modest. So, from an environmental point of view border tax adjustments would not be a very effective policy measure, but might mainly be justified by considerations of sectoral competitiveness. (author)

  12. Containment leakage rate test programs to ensure public safety

    International Nuclear Information System (INIS)

    A quality-related containment leakage rate test program to ensure public safety has been established by Northeast Utility Service Company (NUSCO). This effort has been particularly challenging because NUSCO operates four nuclear units of diverse type, design, and age. The program's emphasis is to assure our reactor containments will adequately protect the public from core damage accidents and achieve compliance with 10CFR50, Appendix J, of the Code of Federal Regulations. Technical aspects of the program include state-of-the-art integrated leakage rate test ILRT data acquisition, with analysis and display capability, improved test techniques and methods, test procedure review checkoff lists, technical guidelines for test equipment and use, and data analysis and interpretation of penetration leakage performance with an historical local leakage rate test (LLRT) data base. NUSCO has a computerized LLRT data analysis software code that calculates both maximum and minimum pathway penetration leakage rates for various containment penetration configurations. The code is user-friendly, simple, and runs on an IBM PC

  13. Effects of Geometry on Leakage Flow Characteristics of Brush Seal

    Institute of Scientific and Technical Information of China (English)

    Yuan Wei; Zhaobo Chen∗; Yinghou Jiao

    2015-01-01

    In order to better application of brush seal in rotating machinery, the leakage flow characteristics of the brush seal considering geometry effects are numerically analyzed using Reynolds⁃Averaged Navier⁃Stokes ( RANS) model coupling with a non⁃Darcian porous medium model. The reliability of the present numerical method is proved, which is in agreement with the experimental and numerical results from literatures. Three different bristle pack thicknesses, fence heights and initial clearances under different pressure ratios, rotational velocities and other operating conditions are utilized to investigate the effects of geometry modification on the brush seal leakage flow behaviors. It discusses the effectiveness of various geometry configurations outlining important flow features. The results indicate that the increase of fence height and clearance would lead to the increase of leakage rate. But the leakage is not linearly with respect to the bristle pack thickness, and the effect of rotational velocity is not obvious. Moreover, the detailed leakage flow fields and pressure distributions along the rotor surface, free bristle height, and fence height of the brush seals are also presented. The static pressure drop amplitude through the bristle pack and the pressure rise amplitude through the cavity would increase while the pressure differential increases. And the axial pressure is the main reason of bristle blow down. The results provide theoretical support for the brush seal structure optimal design.

  14. Radio frequency leakage current from unipolar laparoscopic electrocoagulators.

    Science.gov (United States)

    DiNovo, J A

    1983-09-01

    Radio frequency (RF) leakage current has been suspected of causing accidental tissue burns associated with laparoscopic electrocoagulation used for tubal sterilization. A study was done to determine the levels of capacitively coupled RF leakage current from six unipolar laparoscopes manufactured by five companies. Leakage current values ranging from less than 100 mA to over 550 mA were measured at electrosurgical unit power settings of up to 150 w into 1,000 ohms. These levels represent 24-62% of the total electrosurgical current generated by the electrosurgical units. Using a criterion for tissue injury of 100 mA/sq cm applied for ten seconds, leakage current levels exceeding 400 mA are capable of producing burns either at the abdominal wall or to internal organs that accidentally come into contact with the body of the laparoscope. One of the six devices tested had leakage current levels higher than 400 mA at power settings lower than 100 w. Capacitance measurements between the unipolar laparoscope body and the forceps ranged from 53 to 140 picofarads. PMID:6226780

  15. Suppression and control of leakage field in electromagnetic helical microwiggler

    Energy Technology Data Exchange (ETDEWEB)

    Ohigashi, N. [Kansai Univ., Osaka (Japan); Tsunawaki, Y. [Osaka Sangyo Univ. (Japan); Imasaki, K. [Institute for Laser Technology, Osaka (Japan)] [and others

    1995-12-31

    Shortening the period of electromagnetic wiggler introduces both the radical increase of the leakage field and the decrease of the field in the gap region. The leakage field is severer problem in planar electromagnetic wiggler than in helical wiggler. Hence, in order to develop a short period electromagnetic wiggler, we have adopted {open_quotes}three poles per period{close_quotes} type electromagnetic helical microwiggler. In this work, we inserted the permanent magnet (PM) blocks with specific magnetized directions in the space between magnetic poles, for suppressing the leakage field flowing out from a pole face to the neighboring pole face. These PM-blocks must have higher intrinsic coersive force than saturation field of pole material. The gap field due to each pole is adjustable by controlling the leakage fields, that is, controlling the position of each iron screw set in each retainer fixing the PM-blocks. At present time, a test wiggler with period 7.8mm, periodical number 10 and gap length 4.6mm has been manufactured. Because the ratio of PM-block aperture to gap length is important parameter to suppress the leakage field, the parameter has been surveyed experimentally for PM-blocks with several dimensions of aperture. The field strength of 3-5kG (K=0.2-0.4) would be expected in the wiggler.

  16. The Leakage Risk Monetization Model for Geologic CO2 Storage.

    Science.gov (United States)

    Bielicki, Jeffrey M; Pollak, Melisa F; Deng, Hang; Wilson, Elizabeth J; Fitts, Jeffrey P; Peters, Catherine A

    2016-05-17

    We developed the Leakage Risk Monetization Model (LRiMM) which integrates simulation of CO2 leakage from geologic CO2 storage reservoirs with estimation of monetized leakage risk (MLR). Using geospatial data, LRiMM quantifies financial responsibility if leaked CO2 or brine interferes with subsurface resources, and estimates the MLR reduction achievable by remediating leaks. We demonstrate LRiMM with simulations of 30 years of injection into the Mt. Simon sandstone at two locations that differ primarily in their proximity to existing wells that could be leakage pathways. The peak MLR for the site nearest the leakage pathways ($7.5/tCO2) was 190x larger than for the farther injection site, illustrating how careful siting would minimize MLR in heavily used sedimentary basins. Our MLR projections are at least an order of magnitude below overall CO2 storage costs at well-sited locations, but some stakeholders may incur substantial costs. Reliable methods to detect and remediate leaks could further minimize MLR. For both sites, the risk of CO2 migrating to potable aquifers or reaching the atmosphere was negligible due to secondary trapping, whereby multiple impervious sedimentary layers trap CO2 that has leaked through the primary seal of the storage formation. PMID:27052112

  17. Understanding instrumental Stokes leakage in Murchison Widefield Array polarimetry

    Science.gov (United States)

    Sutinjo, A.; O'Sullivan, J.; Lenc, E.; Wayth, R. B.; Padhi, S.; Hall, P.; Tingay, S. J.

    2015-01-01

    This paper offers an electromagnetic, more specifically array theory, perspective on understanding strong instrumental polarization effects for planar low-frequency "aperture arrays" with the Murchison Widefield Array (MWA) as an example. A long-standing issue that has been seen here is significant instrumental Stokes leakage after calibration, particularly in Stokes Q at high frequencies. A simple model that accounts for interelement mutual coupling is presented which explains the prominence of Q leakage seen when the array is scanned away from zenith in the principal planes. On these planes, the model predicts current imbalance in the X (E-W) and Y (N-S) dipoles and hence the Q leakage. Although helpful in concept, we find that this model is inadequate to explain the full details of the observation data. This finding motivates further experimentation with more rigorous models that account for both mutual coupling and embedded element patterns. Two more rigorous models are discussed: the "full" and "average" embedded element patterns. The viability of the full model is demonstrated by simulating current MWA practice of using a Hertzian dipole model as a Jones matrix estimate. We find that these results replicate the observed Q leakage to approximately 2 to 5%. Finally, we offer more direct indication for the level of improvement expected from upgrading the Jones matrix estimate with more rigorous models. Using the average embedded pattern as an estimate for the full model, we find that Q leakage of a few percent is achievable.

  18. Report on the water leakage from instrumentation pipe in JMTR

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2003-03-01

    On December 10, 2002, the leakage was found at the pressure instrumentation pipe attached to the exit pipe of No.1 charging pump of the purification system of a primary cooling system at JMTR in the Oarai Research establishment, JAERI. The Investigation Committee for Water Leakage from Instrumentation Pipe in JMTR was established and organized by specialists from inside and outside JAERI on December 16 and its meeting was held in public 3 times by 6th January, 2003. They found out the cause and countermeasures of cracks, and also investigated enhancement of safety management. As the result, it was considered that the leakage started around the 6th of December 2002 and the cause of the cracks was due to fatigue by vibration of the charging pump during operation. The committee discovered following incorrect actions in the safety management. First, operation of JMTR was continued without keeping careful watch in spite of occurrence of leakage detector alarm. Second, every time when the alarm range for the reasons other than the leakage, appropriate investigation and countermeasure were not taken. Third, the manager in charge didn't have a fair understanding of the situation and didn't give an appropriate direction. This is the report on the cause and countermeasures of cracks and enhancement of safety management. (author)

  19. Experimental investigation of the leakage behaviour of reinforced concrete walls

    International Nuclear Information System (INIS)

    Information about the leakage behaviour of the containment wall of nuclear power plants is of decisive importance for the verification of nuclear power plant safety. In order to study the leakage behaviour of the inner wall of a double walled containment structure under air-steam loads, a model wall section was tested. The wall section is 1,8 m wide 2,7 m long and 1,2 m thick. The aim of the project was to examine the thermo-hydraulic process of air-steam leakage with possible condensation through known crack patterns. The tests simulate a section of a containment wall and allow to modify the crack width independent from the temperature and internal pressure. Therefore tests at varying crack openings could be performed while using the same load scenario. Additionally to the tests with air steam mixtures pure air tests were performed before, in between and after steam tests in order to compare the leakage rates for the given crack pattern. A significant reduction of leakage was observed during the course of the tests. This leads to the conclusion that a deterioration of the cracks is occurring. But instead of washing out, the cracks actually get clogged and the flow is reduced. (authors)

  20. A smooth and differentiable bulk-solvent model for macromolecular diffraction

    International Nuclear Information System (INIS)

    A new method for modeling the bulk solvent in macromolecular diffraction data based on Babinet’s principle is presented. The proposed models offer the advantage of differentiability with respect to atomic coordinates. Inclusion of low-resolution data in macromolecular crystallography requires a model for the bulk solvent. Previous methods have used a binary mask to accomplish this, which has proven to be very effective, but the mask is discontinuous at the solute–solvent boundary (i.e. the mask value jumps from zero to one) and is not differentiable with respect to atomic parameters. Here, two algorithms are introduced for computing bulk-solvent models using either a polynomial switch or a smoothly thresholded product of Gaussians, and both models are shown to be efficient and differentiable with respect to atomic coordinates. These alternative bulk-solvent models offer algorithmic improvements, while showing similar agreement of the model with the observed amplitudes relative to the binary model as monitored using R, Rfree and differences between experimental and model phases. As with the standard solvent models, the alternative models improve the agreement primarily with lower resolution (>6 Å) data versus no bulk solvent. The models are easily implemented into crystallographic software packages and can be used as a general method for bulk-solvent correction in macromolecular crystallography

  1. Macromolecular knot in good and poor solvents: a Monte Carlo simulation.

    Science.gov (United States)

    Sun, Huan-Quan; Zhang, Lu; Liao, Qi

    2010-09-30

    The probability and dimension of the simple macromolecular knots over a wide range of temperatures corresponding from good to poor solvents are investigated by Monte Carlo simulation. Macromolecular knots are modeled as rings of self-avoiding walks on a simple cubic lattice with the nearest neighbor attractions. We found that there is a minimum probability for the unknotted ring at a certain temperature. The size dependence of trivial, trefoil, and figure-eight knots on chain lengths and temperatures is presented. The simulation results for the size dependence on the knot's complication in different solvents are in good qualitative agreement with prediction of the scaling model proposed by Grosberg et al. The critical exponent for long chain is independent of the knot types based on the simulation results, although the mean square radius of gyration is influenced significantly by the knot types for a shorter length macromolecular ring. We calculated the ratio of the topological invariant p of trefoil knot and figure-eight knot and found that the ratio is approaching to 1.3 with the increasing of the chain length. PMID:20825151

  2. Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics

    Science.gov (United States)

    Moffatt, Ryan; Ma, Buyong; Nussinov, Ruth

    2016-01-01

    Investigation of macromolecular structure and dynamics is fundamental to understanding how macromolecules carry out their functions in the cell. Significant advances have been made toward this end in silico, with a growing number of computational methods proposed yearly to study and simulate various aspects of macromolecular structure and dynamics. This review aims to provide an overview of recent advances, focusing primarily on methods proposed for exploring the structure space of macromolecules in isolation and in assemblies for the purpose of characterizing equilibrium structure and dynamics. In addition to surveying recent applications that showcase current capabilities of computational methods, this review highlights state-of-the-art algorithmic techniques proposed to overcome challenges posed in silico by the disparate spatial and time scales accessed by dynamic macromolecules. This review is not meant to be exhaustive, as such an endeavor is impossible, but rather aims to balance breadth and depth of strategies for modeling macromolecular structure and dynamics for a broad audience of novices and experts. PMID:27124275

  3. Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics.

    Science.gov (United States)

    Maximova, Tatiana; Moffatt, Ryan; Ma, Buyong; Nussinov, Ruth; Shehu, Amarda

    2016-04-01

    Investigation of macromolecular structure and dynamics is fundamental to understanding how macromolecules carry out their functions in the cell. Significant advances have been made toward this end in silico, with a growing number of computational methods proposed yearly to study and simulate various aspects of macromolecular structure and dynamics. This review aims to provide an overview of recent advances, focusing primarily on methods proposed for exploring the structure space of macromolecules in isolation and in assemblies for the purpose of characterizing equilibrium structure and dynamics. In addition to surveying recent applications that showcase current capabilities of computational methods, this review highlights state-of-the-art algorithmic techniques proposed to overcome challenges posed in silico by the disparate spatial and time scales accessed by dynamic macromolecules. This review is not meant to be exhaustive, as such an endeavor is impossible, but rather aims to balance breadth and depth of strategies for modeling macromolecular structure and dynamics for a broad audience of novices and experts. PMID:27124275

  4. Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics.

    Directory of Open Access Journals (Sweden)

    Tatiana Maximova

    2016-04-01

    Full Text Available Investigation of macromolecular structure and dynamics is fundamental to understanding how macromolecules carry out their functions in the cell. Significant advances have been made toward this end in silico, with a growing number of computational methods proposed yearly to study and simulate various aspects of macromolecular structure and dynamics. This review aims to provide an overview of recent advances, focusing primarily on methods proposed for exploring the structure space of macromolecules in isolation and in assemblies for the purpose of characterizing equilibrium structure and dynamics. In addition to surveying recent applications that showcase current capabilities of computational methods, this review highlights state-of-the-art algorithmic techniques proposed to overcome challenges posed in silico by the disparate spatial and time scales accessed by dynamic macromolecules. This review is not meant to be exhaustive, as such an endeavor is impossible, but rather aims to balance breadth and depth of strategies for modeling macromolecular structure and dynamics for a broad audience of novices and experts.

  5. Tuning the properties of an anthracene-based PPE-PPV copolymer by fine variation of its macromolecular parameters

    Czech Academy of Sciences Publication Activity Database

    Tinti, F.; Sabir, F. K.; Gazzano, M.; Righi, S.; Ulbricht, C.; Usluer, Ö.; Pokorná, Veronika; Cimrová, Věra; Yohannes, T.; Egbe, D. A. M.; Camaioni, N.

    2013-01-01

    Roč. 3, č. 19 (2013), s. 6972-6980. ISSN 2046-2069 R&D Projects: GA ČR GAP106/12/0827; GA ČR(CZ) GA13-26542S Institutional support: RVO:61389013 Keywords : anthracene-containing PPE-PPV copolymer * macromolecular parameters * structural and transport properties Subject RIV: CD - Macromolecular Chemistry Impact factor: 3.708, year: 2013

  6. Macromolecular Crowding Modifies the Impact of Specific Hofmeister Ions on the Coil-Globule Transition of PNIPAM.

    Science.gov (United States)

    Sakota, Kenji; Tabata, Daiki; Sekiya, Hiroshi

    2015-08-13

    Macromolecular crowding alters many biological processes ranging from protein folding and enzyme reactions in vivo to the precipitation and crystallization of proteins in vitro. Herein, we have investigated the effect of specific monovalent Hofmeister salts (NaH2PO4, NaF, NaCl, NaClO4, and NaSCN) on the coil-globule transition of poly(N-isopropylacrylamide) (PNIPAM) in a crowded macromolecular environment as a model for understanding the specific-ion effect on the solubility and stability of proteins in a crowded macromolecular environment. It was found that although the salts (NaH2PO4, NaF, and NaCl) and the macromolecular crowder (polyethylene glycol) lowered the transition temperature almost independently, the macromolecular crowder had a great impact on the transition temperature in the case of the chaotropes (NaClO4 and NaSCN). The electrostatic repulsion between the chaotropic anions (ClO4(-) or SCN(-)) adsorbed on PNIPAM may reduce the entropic gain of water associated with the excluded volume effect, leading to an increase in the transition temperature, especially in the crowded environment. Furthermore, the affinity of the chaotropic anions for PNIPAM becomes small in the crowded environment, leading to further modification of the transition temperature. Thus, we have revealed that macromolecular crowding alters the effect of specific Hofmeister ions on the coil-globule transition of PNIPAM. PMID:26215482

  7. Impact of the Indonesian throughflow on Agulhas leakage

    Directory of Open Access Journals (Sweden)

    D. Le Bars

    2013-02-01

    Full Text Available Using ocean models of different complexity we show that opening the Indonesian Passage between the Pacific and the Indian Ocean increases the input of Indian Ocean water into the South Atlantic via the Agulhas leakage. In a strongly eddying global ocean model this response results from an increased Agulhas Current transport and a constant proportion of Agulhas retroflection south of Africa. The leakage increases through an increased frequency of ring shedding events. In an idealized two-layer and flat-bottom eddy resolving model, the proportion of the Agulhas Current transport that retroflects is (for a wide range of wind stress forcing not affected by an opening of the Indonesian Passage. A linear ocean model is not able to explain this behavior which reveals the importance of mixed barotropic/baroclinic instabilities in controlling the Agulhas leakage.

  8. Understanding Instrumental Stokes Leakage in Murchison Widefield Array Polarimetry

    CERN Document Server

    Sutinjo, Adrian; Lenc, Emil; Wayth, Randall B; Padhi, Shantanu; Hall, Peter; Tingay, Steven J

    2014-01-01

    This paper offers an electromagnetic, more specifically array theory, perspective on understanding strong instrumental polarization effects for planar low-frequency "aperture arrays" with the Murchison Widefield Array (MWA) as an example. A long-standing issue that has been seen here is significant instrumental Stokes leakage after calibration, particularly in Stokes Q at high frequencies. A simple model that accounts for inter-element mutual coupling is presented which explains the prominence of Q leakage seen when the array is scanned away from zenith in the principal planes. On these planes, the model predicts current imbalance in the X (E-W) and Y (N-S) dipoles and hence the Q leakage. Although helpful in concept, we find that this model is inadequate to explain the full details of the observation data. This finding motivates further experimentation with more rigorous models that account for both mutual coupling and embedded element patterns. Two more rigorous models are discussed: the "full" and "average...

  9. Air Leakage of U.S. Homes: Model Prediction

    Energy Technology Data Exchange (ETDEWEB)

    Sherman, Max H.; McWilliams, Jennifer A.

    2007-01-01

    Air tightness is an important property of building envelopes. It is a key factor in determining infiltration and related wall-performance properties such as indoor air quality, maintainability and moisture balance. Air leakage in U.S. houses consumes roughly 1/3 of the HVAC energy but provides most of the ventilation used to control IAQ. The Lawrence Berkeley National Laboratory has been gathering residential air leakage data from many sources and now has a database of more than 100,000 raw measurements. This paper uses a model developed from that database in conjunction with US Census Bureau data for estimating air leakage as a function of location throughout the US.

  10. Containment integrated leakage rate test (ILRT) of Indian PHWR

    International Nuclear Information System (INIS)

    Integrated Leakage Rate Test (ILRT) of containment system plays a very important role in safety of a Nuclear Power Plant. Containment system constitutes the last physical barrier to release of radioactivity from the core and is called upon to mitigate the consequences of not only accidents within the design basis, but also some of the highly unlikely severe accidents. Hence, leak tightness of containment becomes uttermost priority for the safety of plant personnel and public. The containment and associated ESFs are tested before the first criticality and there after periodically during service. The pre-operational integrated leakage rate is carried out at LOCA based design pressure, at periodic test pressure and at some intermediate pressure points to assess the leakage characteristics. This paper summarizes the various requirements and activities relevant to the ILRT of the Indian Pressurized Heavy Water Reactor (PHWR) containment system. (author)

  11. Suppression of tunneling leakage current in junctionless nanowire transistors

    International Nuclear Information System (INIS)

    In this paper, the characteristics of tunneling leakage current for the dual-material gate junctionless nanowire transistor (DMG-JNT) are investigated by three-dimensional numerical simulations and compared with conventional junctionless nanowire transistor (JNT). The suppression of the tunneling leakage current on the JNT by introducing an energy band step with the DMG structure is verified and presented for the first time. The effects of channel length on the DMG-JNT and the JNT are also studied. Results showed that the tunneling leakage current of the DMG-JNT is two orders smaller than that of the JNT, and further, the DMG-JNT exhibits superior scaling capability. Two key design parameters of the DMG-JNT, control gate ratio (Ra) and work function difference (δW), have been optimized and the optimal ranges of Ra and δW are pointed out. (paper)

  12. Explicit transverse leakage treatment using an analytic basis function expansion

    International Nuclear Information System (INIS)

    An explicit method for calculating the transverse leakage is presented in this paper. The method is based upon the use of analytic basis functions, which represent individual eigenfunctions of the neutron diffusion equation. The intranodal flux solution is expressed as an eigenspace, and can be solved by using the already calculated surface currents and flux moments as boundary conditions. The salient feature of the method, therefore, is that no ad hoc presumptions are made with regard to the leakage shape. The individual eigenfunctions are calculated based upon already calculated parameters from the flux solution and response matrix solution, and therefore no additional parameters are introduced into the problem, which could lead to an unwanted increase in computation time. The new transverse leakage method is implemented in PSU's NEM code and is tested against the OECD/NEA 3D C5G7 rodded MOX benchmark and the C3 benchmark. (author)

  13. Determination of leakage in blast furnaces cooling plates

    International Nuclear Information System (INIS)

    Blast furnace walls are cooled by the circulation of water through copper plates inserted into the blast furnace refractory lining. Plates are fed by circular pipelines, called distribution rings, installed at different levels of the reactor. Because of normal corrosion, plates wear away and can eventually perforate, allowing the leakage of cooling water inside the blast furnace. A system has been designed and installed in order to confirm the eventual occurrence of leakages in the cooling plates of a blast furnace refractory lining. The system injects a solution of tritium into the feeding pipeline and determines, by means of liquid scintillation counting, the concentration of tritium in the exhausting gases at the top of the blast furnace. The system was tested under different blast furnace operating conditions, and allowed the detection and determination of leakages greater than 0.5 1/min. Following necessary maintenance, the system also confirmed the satisfactory results of the corrective actions. (author). 48 refs., 13 figs., 29 tabs

  14. Power Beaming Leakage Radiation as a SETI Observable

    CERN Document Server

    Benford, James N

    2016-01-01

    The most observable leakage radiation from an advanced civilization may well be from the use of power beaming to transfer energy and accelerate spacecraft. Applications suggested for power beaming involve Earth-to-space applications such as launching spacecraft to orbit, raising satellites to a higher orbit, and interplanetary concepts involving space-to-space transfers of cargo or passengers. We also quantify beam-driven launch to the outer solar system, interstellar precursors and ultimately starships. We estimate the principal observable parameters of power beaming leakage. Extraterrestrial civilizations would know their power beams could be observed, and so could put a message on the power beam and broadcast it for our receipt at little additional energy or cost. By observing leakage from power beams we may find a message embedded on the beam. Recent observations of the anomalous star KIC 8462852 by the Allen Telescope Array (ATA) set some limits on extraterrestrial power beaming in that system. We show t...

  15. Functions and requirements for single-shell tank leakage mitigation

    International Nuclear Information System (INIS)

    This document provides the initial functions and requirements for the leakage mitigation mission applicable to past and potential future leakage from the Hanford Site's 149 single-shell high-level waste tanks. This mission is a part of the overall mission of the Westinghouse Hanford Company Tank Waste Remediation System division to remediate the tank waste in a safe and acceptable manner. Systems engineering principles are being applied to this effort. A Mission Analysis has been completed, this document reflects the next step in the systems engineering approach to decompose the mission into primary functions and requirements. The functions and requirements in this document apply to mitigative actions to be taken regarding below ground leaks from SST containment boundaries and the resulting soil contamination. Leakage mitigation is invoked in the TWRS Program in three fourth level functions: (1) Store Waste, (2) Retrieve Waste, and (3) Disposition Excess Facilities

  16. Cuffed Endotracheal Tube Size and Leakage in Pediatric Tracheal Models

    Directory of Open Access Journals (Sweden)

    Jun Hyun Kim

    2014-04-01

    Full Text Available Object: Cuffed endotracheal tubes are increasingly used in pediatric patients in the hope that they can reduce air leakage and tube size mismatch by just inflating the cuff. Authors compared influence of various tube sizes and different levels of cuff pressures to air leakage around the cuff, in artificial tracheal models. Methods: Six PVC cylinders of different internal diameters (ID: 8.15, 8.50, 9.70, 12.05, 14.50, and 20.00 mm were prepared. An artificial lung connected with cylinder was ventilated with an anesthesia machine. Cuffed endotracheal tubes of different sizes (ID 3.0~8.0 were located in the cylinders and the cuff was inflated with various pressures (15, 20, 25, 30 and 35 cm H2O. Expiratory tidal volume was measured with more than 25% loss of baseline expiratory tidal volume was considered significant air leakage. Results: Tube sizes same as, or larger than ID 5.0 didn’t show significant air leakage for any trachea model, only if the inflated cuff size is larger than the cylinder ID, except ID 5.5 tube at cuff pressure 15 cm H2O and 20 cm H2O, in 12.05 mm cylinder. Tubes sizes same as or smaller than ID 4.5, which have short cuff lengths and sizes than tubes larger than, or same as ID 5.0, leaked significantly at any tracheal models, except ID 4.5 tube at cuff pressure 35 cm H2O, in 8.50 mm cylinder. Conclusion: In PVC pediatric tracheal models, tubes same as, or smaller than ID 4.5 are inferior to tubes same as, or larger than ID 5.0 in preventing air leakage, and may need a higher cuff pressure to reduce air leakage. Further clinical studies could be designed based on our results.

  17. On camera-based smoke and gas leakage detection

    Energy Technology Data Exchange (ETDEWEB)

    Nyboe, Hans Olav

    1999-07-01

    Gas detectors are found in almost every part of industry and in many homes as well. An offshore oil or gas platform may host several hundred gas detectors. The ability of the common point and open path gas detectors to detect leakages depends on their location relative to the location of a gas cloud. This thesis describes the development of a passive volume gas detector, that is, one than will detect a leakage anywhere in the area monitored. After the consideration of several detection techniques it was decided to use an ordinary monochrome camera as sensor. Because a gas leakage may perturb the index of refraction, parts of the background appear to be displaced from their true positions, and it is necessary to develop algorithms that can deal with small differences between images. The thesis develops two such algorithms. Many image regions can be defined and several feature values can be computed for each region. The value of the features depends on the pattern in the image regions. The classes studied in this work are: reference, gas, smoke and human activity. Test show that observation belonging to these classes can be classified fairly high accuracy. The features in the feature set were chosen and developed for this particular application. Basically, the features measure the magnitude of pixel differences, size of detected phenomena and image distortion. Interesting results from many experiments are presented. Most important, the experiments show that apparent motion caused by a gas leakage or heat convection can be detected by means of a monochrome camera. Small leakages of methane can be detected at a range of about four metres. Other gases, such as butane, where the densities differ more from the density of air than the density of methane does, can be detected further from the camera. Gas leakages large enough to cause condensation have been detected at a camera distance of 20 metres. 59 refs., 42 figs., 13 tabs.

  18. Properties of Leakage Corrosion of Concrete and Its Durability

    Institute of Scientific and Technical Information of China (English)

    GE Xueliang; FANG Kunhe; ZENG Li; CHEN Xia

    2008-01-01

    The properties and mechanism of concrete under water leakage corrosion were studied in terms of the dissolution of calcium oxide and silicon oxide from concrete and the variation of pH value of permeate water.The experimental results show that the amount of calcium oxide and silicon oxide dissolved from per cubic meter of concrete gradually decrease with penetration time and ultimately stabilize at a certain value.The pH value of permeate water descend along with penetration time.The durability of concrete under leakage corrosion was analyzed by a formula fitted on the dissolved amount of calcium oxide.

  19. Airbag for the closing of pipelines on explosions and leakages

    DEFF Research Database (Denmark)

    Eisenreich, N.; Neutz, J.; Seiler, F.;

    2007-01-01

    This paper is a result of international effort aimed at the construction of a device for quick closing of pipelines in the case of explosion propagation and/or chemical leakage. Such a problem exists in industries where flammable substances are transported by pipelines. The basic solution principle...... was the idea to use airbags similar to those utilized in cars. Two pipeline applications were taken into consideration: a low-pressure module able to suppress explosion propagation and a high-pressure module to stop leakages from, e.g. natural gas pipeline capable to be used for duct diameters up to 0...

  20. Leakage tests of wall segments of reactor containments

    International Nuclear Information System (INIS)

    Two prestressed concrete wall segments simulating portions of containment walls were loaded by axial tensile forces to cause cracking of the concrete. At each load increment air pressure was applied in steps up to 21 psi to one side of the segment and the rate of leakage of air through the cracked concrete section was measured. A theoretical equation for the flow of air through concrete cracks is developed and the results from one leakage test are used to determine the dimensionless constant required for this equation. (author)

  1. Root cause evaluation of pressurizer relief valve leakage

    International Nuclear Information System (INIS)

    Pressurizer relief valves at two pressurized water reactor units experienced unacceptable leakage during plant heatup. The leakage was suspected to be caused by excessive pipe loads on the valves. This paper describes how monitoring via hard-wired transducers and a digital data acquisition system was used to quantify the pipe loads on the valves, and assist in determining the root cause of the pipe loads and appropriate corrective actions. The selection of the parameters monitored, how the monitoring was accomplished and interpretation of the results is discussed. The corrective actions implemented based on the monitoring results are also discussed

  2. Leakage Inductance Calculation for Planar Transformers with a Magnetic Shunt

    DEFF Research Database (Denmark)

    Zhang, Jun; Ouyang, Ziwei; Duffy, Maeve C.;

    2014-01-01

    The magnetic shunt is generally inserted in a planar transformer to increase the leakage inductance which can be utilized as the series inductor in resonant circuits such as the LLC resonant converter. This paper presents a calculation methodology for the leakage inductance of the transformer with...... a magnetic shunt by means of the stored magnetic energy in the primary and secondary sides of the transformer using the magnetomotive force (MMF) variation method, as well as the stored energy in the shunt based on the reluctance model. The detailed calculation method is described. Both the FEA...

  3. Remote laser detection of natural gas leakages from pipelines

    International Nuclear Information System (INIS)

    A differential absorption lidar based on a tunable TEA CO2 laser emitting at 42 lines of the 'hot' 0111 - 1110 band in the range from 10.9 to 11.4 μm is developed for detecting natural gas leakages from oil pipelines by measuring the ethane content in the atmosphere. The ethane detection sensitivity is 0.9 ppm km. The presence of methane does not distort the measurement results. The developed lidar can detect the natural gas leakage from kilometre heights at the flying velocities up to 200 km h-1 and a probe pulse repetition rate of 5 Hz. (laser applications and other topics in quantum electronics)

  4. The effect of macromolecular crowding on the structure of the protein complex superoxide dismutase

    Science.gov (United States)

    Rajapaksha Mudalige, Ajith Rathnaweera

    Biological environments contain between 7 - 40% macromolecules by volume. This reduces the available volume for macromolecules and elevates the osmotic pressure relative to pure water. Consequently, biological macromolecules in their native environments tend to adopt more compact and dehydrated conformations than those in vitro. This effect is referred to as macromolecular crowding and constitutes an important physical difference between native biological environments and the simple solutions in which biomolecules are usually studied. We used small angle scattering (SAS) to measure the effects of macromolecular crowding on the size of a protein complex, superoxide dismutase (SOD). Crowding was induced using 400 MW polyethylene glycol (PEG), triethylene glycol (TEG), methyl-alpha-glucoside (alpha-MG) and trimethylamine N-oxide (TMAO). Parallel small angle neutron scattering (SANS) and small angle X-ray scattering (SAXS) allowed us to unambiguously attribute apparent changes in radius of gyration to changes in the structure of SOD. For a 40% PEG solution, we find that the volume of SOD was reduced by 9%. SAS coupled with osmotic pressure measurements allowed us to estimate a compressibility modulus for SOD. We believe this to be the first time the osmotic compressibility of a protein complex was measured. Molecular Dynamics (MD) simulations are widely used to obtain insights on biomolecular processes. However, it is not clear whether MD is capable of predicting subtle effects of macromolecular crowding. We used our experimentally observed compressibility of SOD to evaluate the ability of MD to predict macromolecular crowding. Effects of macromolecular crowding due to PEG on SOD were modeled using an all atom MD simulation with the CHARMM forcefield and the crystallographically resolved structures of SOD and PEG. Two parallel MD simulations were performed for SOD in water and SOD in 40% PEG for over 150~ns. Over the period of the simulation the SOD structure in 40

  5. Leakage Rate Testing of Containment Vessels by the Reference Method

    International Nuclear Information System (INIS)

    The miscellaneous methods which up to now have been used in leakage rate testing are briefly described and generally compared. Among the transient methods the reference method seems to be the one with the best accuracy for comparable efforts and expenses. Unfortunately all measurements of this kind reported in German literature were terminated more or less without any useful results. The reason appears to lie with the applied techniques. This is especially implied in the case of the Lingen containment, where the reference system consisted of steel and polyethylene tubes. Here the pressure difference showed the wrong sign, i.e. the pressure of the reference system decreased faster than the pressure in the containment vessel. This phenomenon could not be explained quantitatively but must be sought with the design and the materials applied for the reference system. To compare the relative merits and to survey the challenges the appropriate formulae for the leakage rates of the absolute and the reference system are derived from thermodynamics. A small difference of two large numbers must be calculated for the absolute method; with the reference method such small differences are needed for correction terms only, while the pressure difference is measured directly. An opportunity to test the theory of the reference method ca m e with the first retesting of the KRB containment at Gundremmingen, Bavaria. Here two reference volumes built of copper tubes and soldered fittings were installed. Before the leakage rate testing proper, the leakage rates of both the volumes were established, to be used for a correction term in the evaluation. Six hours after equilibrium was reached it could be derived from the pressure differences measured that the leakage rate was clearly below the acceptable limit. To get the final values of the leakage rates the pressure differences after 24 and 48 h were taken and corrected for humidity and the leakage rates of the reference volumes. All of the

  6. University student's education after Fukushima nuclear leakage crisis

    International Nuclear Information System (INIS)

    Fukushima nuclear leakage crisis after 3.11 earthquake and tsunami, the horrible INES-7 accident warns the colleagues all over the world. Own much to the experts' reports on public media, INES classification, basic knowledge of nuclear reactor, nuclear safety and protection had been discussed and brain-stormed in detail. (authors)

  7. Characterization of CO2 leakage into the freshwater body

    DEFF Research Database (Denmark)

    Singh, Ashok; Delfs, Jens Olaf; Shao, H.;

    2013-01-01

    urrent research into CO2 capture and storage is dominated by improving the CO2 storage capacity. In this context, risk related to CO2 leakage is an important issue which may cause environmental problems, particularly when freshwater resources nearby are intruded by the CO2 plume. In this work, the...

  8. Modelling of heterogenous neutron leakages in a nuclear reactor

    International Nuclear Information System (INIS)

    The TIBERE Model is a neutron leakage method based on B1 heterogeneous transport equation resolution. In this work, we have studied the influence of the reflection mode at the boundary of the assembly. In particular the White boundary condition has been implemented in the APOLLO2 neutron transport code. We have compared the two TIBERE kinds of boundary conditions (specular and white) with the classical B1 homogeneous leakage method in the modelling of some reactors. We have remarked the better capability of the TIBERE Model to compute voided assemblies. The white boundary condition is also able to compute a completely voided assembly and, besides, wins a factor 10 in CPU time in comparison with the specular boundary condition. These two heterogenous leakage formalisms have been tested on a partially voided experiment and have shown that the TIBERE Model can compute this kind of situation with a greater precision than the classical B1 homogeneous leakage method, and with a shorter computational time. (author)

  9. Method for Determining Leakage Velocities through the Bottom of Reservoirs

    International Nuclear Information System (INIS)

    A new method based on an idea of converting a slow flow through a chosen area of reservoir bottom to a fast flow in a pipe of a small diameter is presented. If the chosen area is tightly covered by a bottomless cylinder with an outlet through a pipe then the product of leakage velocity and the area covered is equal to the product of flow velocity in the pipe and the pipe cross-section. Even extremely low leakage velocities render measurable velocities in the pipe if its cross-section is very small in comparison with the covered area. This idea can be used for leakage velocity measurements if the measuring device does not disturb natural flow lines. Conditions under which this requirement is satisfied are considered in detail. A measuring device constructed according to these conditions and described in the paper can measure leakage velocities from 5 x 10-7 to 3 x 10-3 cm/sec. The flow velocity in the measuring pipe is known from the transit time measurement of an injected pulse of a radioisotope. (author)

  10. Development of Wireless System for Containment Integrated Leakage Rate Test

    International Nuclear Information System (INIS)

    The containment system leakage rate should be estimated periodically with reliable test equipment. In light-water reactor nuclear power plants, ANSI/ANS- 56.8 is a basis for determining leakage rates. Two types of data acquisition system, centralized type and networked type, has been used. In centralized type, all sensors are connected directly from sensors in the containment to the measuring equipment outside the building. The other hand, the networked type has several branch chains which connect one group of the network-sensors together. To test leakage rate, more than 20 temperature sensors and 6 humidity sensors, which are different for each plant, should be installed on a specific level in the containment. A wireless technology gives the benefits such as reducing installation efforts, making pretest easy, so it is widely used more and more in the plant monitoring. As the containment system has many kinds of complex barriers to the radio frequency, the radio power and frequency band for better transmission rate as well as the interference by the radio frequency should be considered. The overview of the wireless sensor system for the containment leakage rate test is described here and the test results on Yonggwang unit 4 PWR plant is presented

  11. Supernovae, CMB, and Gravitational Leakage into Extra Dimensions

    OpenAIRE

    Deffayet, Cedric; Landau, Susana J.; Raux, Julien; Zaldarriaga, Matías; Astier, Pierre

    2002-01-01

    We discuss observational constraints coming from CMB and type Ia supernovae, for the model of accelerated universe produced by gravitational leakage into extra dimensions. Our fits indicate that the model is currently in agreement with the data. We also give the equations governing the evolution of cosmological perturbations. Future observations will be able to severely constrain the model.

  12. Supernovae, CMB, and gravitational leakage into extra dimensions

    International Nuclear Information System (INIS)

    We discuss observational constraints coming from CMB and type Ia supernovae for the model of an accelerated universe produced by gravitational leakage into extra dimensions. Our fits indicate that the model is currently in agreement with the data. We also give the equations governing the evolution of cosmological perturbations. Future observations will be able to severely constrain the model

  13. Lack of correlation between obturation limits and apical leakage

    Directory of Open Access Journals (Sweden)

    Ricardo Machado

    2013-07-01

    Full Text Available The aim of this paper was to evaluate a possible correlation between obturation limits and leakage. Thirty-six extracted human mandibular incisors were used, characterized by straight and single canals, non-anatomical complexities, absence of previous endodontic treatment, complete root formation and patent foramen. For standardization of the specimens for the leakage analysis, foraminal instrumentation was performed up to a Flexofile #25 (Dentsply-Maillefer, Ballaigues, Switzerland. All specimens were instrumented and filled following the same protocol, and the obturation limits were measured using Axiovision 4.5 Software (Carl Zeiss Vision, Hallbergmoos, Germany. The specimens were then separated into three groups (n = 12 according to the following variables: Group I - obturation limits ranging from 0 mm to 0.76 mm of the main apical foramen. Group II - obturation limits ranging from 0.77 mm to 0.98 mm of the main apical foramen. Group III - obturation limits ranging from 0.99 mm to 1.68 mm of the main apical foramen. Apical leakage was quantified by fluid filtration. The analyses were confronted using Pearson's test (p > 0.05. Groups I, II and III showed Pearson correlation values (r2 of -0.152, -0.186 and 0.058, respectively. No correlation was found between the obturation limits and apical leakage

  14. 49 CFR 178.348-5 - Pressure and leakage test.

    Science.gov (United States)

    2010-10-01

    ... test. (a) Each cargo tank must be tested in accordance with § 178.345-13 and this section. (b) Pressure test. Test pressure must be as follows: (1) Using the hydrostatic test method, the test pressure must... 49 Transportation 2 2010-10-01 2010-10-01 false Pressure and leakage test. 178.348-5 Section...

  15. 49 CFR 178.347-5 - Pressure and leakage test.

    Science.gov (United States)

    2010-10-01

    ... test. (a) Each cargo tank must be tested in accordance with § 178.345-13 and this section. (b) Pressure test. Test pressure must be as follows: (1) Using the hydrostatic test method, the test pressure must... 49 Transportation 2 2010-10-01 2010-10-01 false Pressure and leakage test. 178.347-5 Section...

  16. 49 CFR 178.346-5 - Pressure and leakage tests.

    Science.gov (United States)

    2010-10-01

    ... CFR 63.425(e). To satisfy the leakage test requirements of this paragraph, the test specified in 40 CFR 63.425(e)(1) must be conducted using air. The hydrostatic test alternative permitted under... test. Test pressure must be as follows: (1) Using the hydrostatic test method, the test pressure...

  17. Can paternal leakage maintain sexually antagonistic polymorphism in the cytoplasm?

    Science.gov (United States)

    Kuijper, B; Lane, N; Pomiankowski, A

    2015-02-01

    A growing number of studies in multicellular organisms highlight low or moderate frequencies of paternal transmission of cytoplasmic organelles, including both mitochondria and chloroplasts. It is well established that strict maternal inheritance is selectively blind to cytoplasmic elements that are deleterious to males - 'mother's curse'. But it is not known how sensitive this conclusion is to slight levels of paternal cytoplasmic leakage. We assess the scope for polymorphism when individuals bear multiple cytoplasmic alleles in the presence of paternal leakage, bottlenecks and recurrent mutation. When fitness interactions among cytoplasmic elements within an individual are additive, we find that sexually antagonistic polymorphism is restricted to cases of strong selection on males. However, when fitness interactions among cytoplasmic elements are nonlinear, much more extensive polymorphism can be supported in the cytoplasm. In particular, mitochondrial mutants that have strong beneficial fitness effects in males and weak deleterious fitness effects in females when rare (i.e. 'reverse dominance') are strongly favoured under paternal leakage. We discuss how such epistasis could arise through preferential segregation of mitochondria in sex-specific somatic tissues. Our analysis shows how paternal leakage can dampen the evolution of deleterious male effects associated with predominant maternal inheritance of cytoplasm, potentially explaining why 'mother's curse' is less pervasive than predicted by earlier work. PMID:25653025

  18. Exploitation of Unintentional Information Leakage from Integrated Circuits

    Science.gov (United States)

    Cobb, William E.

    2011-01-01

    The information leakage of electronic devices, especially those used in cryptographic or other vital applications, represents a serious practical threat to secure systems. While physical implementation attacks have evolved rapidly over the last decade, relatively little work has been done to allow system designers to effectively counter the…

  19. Thresholds of information leakage for speech security outside meeting rooms.

    Science.gov (United States)

    Robinson, Matthew; Hopkins, Carl; Worrall, Ken; Jackson, Tim

    2014-09-01

    This paper describes an approach to provide speech security outside meeting rooms where a covert listener might attempt to extract confidential information. Decision-based experiments are used to establish a relationship between an objective measurement of the Speech Transmission Index (STI) and a subjective assessment relating to the threshold of information leakage. This threshold is defined for a specific percentage of English words that are identifiable with a maximum safe vocal effort (e.g., "normal" speech) used by the meeting participants. The results demonstrate that it is possible to quantify an offset that links STI with a specific threshold of information leakage which describes the percentage of words identified. The offsets for male talkers are shown to be approximately 10 dB larger than for female talkers. Hence for speech security it is possible to determine offsets for the threshold of information leakage using male talkers as the "worst case scenario." To define a suitable threshold of information leakage, the results show that a robust definition can be based upon 1%, 2%, or 5% of words identified. For these percentages, results are presented for offset values corresponding to different STI values in a range from 0.1 to 0.3. PMID:25190390

  20. Paternal leakage, heteroplasmy, and the evolution of plant mitochondrial genomes.

    Science.gov (United States)

    McCauley, David E

    2013-12-01

    Plant mitochondrial genomes are usually transmitted to the progeny from the maternal parent. However, cases of paternal transmission are known and are perhaps more common than once thought. This review will consider recent evidence, both direct and indirect, of paternal transmission (leakage) of the mitochondrial genome of seed plants, especially in natural populations, and how this can result in offspring that carry a mixture of maternally and paternally derived copies of the genome; a type of heteroplasmy. It will further consider how this heteroplasmy facilitates recombination between genetically distinct partners; a process that can enhance mitochondrial genotypic diversity. This will then form the basis for a discussion of five evolutionary questions that arise from these observations. Questions include how plant mitochondrial genome evolution can be placed on a sexual to asexual continuum, whether cytoplasmic male sterility (CMS) facilitates the evolution of paternal leakage, whether paternal leakage is more likely in populations undergoing admixture, how leakage influences patterns of gene flow, and whether heteroplasmy occurs in natural populations at a frequency greater than predicted by crossing experiments. It is proposed that each of these questions offers fertile ground for future research on a diversity of plant species. PMID:23952142

  1. Osmotic Stressing, Membrane Leakage, and Fluorescence: An Introductory Biochemistry Demonstration

    Science.gov (United States)

    Seu, Kalani J.

    2015-01-01

    A fluorescence demonstration is described that incorporates several fundamental aspects of an introductory biochemistry course. A variation of a known leakage assay is utilized to prepare vesicles containing a quenched fluorophore. The vesicles are exposed to several osmotic environments ranging from isotonic to hypotonic. The degree of vesicle…

  2. On the Connection between Leakage Tolerance and Adaptive Security

    DEFF Research Database (Denmark)

    Nielsen, Jesper Buus; Venturi, Daniele; Zottarel, Angela

    2013-01-01

    We revisit the context of leakage-tolerant interactive protocols as defined by Bitanski, Canetti and Halevi (TCC 2012). Our contributions can be summarized as follows: For the purpose of secure message transmission, any encryption protocol with message space M and secret key space SK tolerating...

  3. Leakage detection in underground gas mains with radioaktive argon

    International Nuclear Information System (INIS)

    In the field of gas supply, radionuclide techniques are suitable for the routine monitoring of transport mains by means of highly active tracer clouds and a measuring scraper as well as for exact leakage detection in local gas distribution systems. Very good results are obtained in the case of mains lying lower than 1.5 m if the length and alignment of the pipe section allow a towing probe to be pulled through. This was investigated systematically on a model stretch under practical conditions. The attempts to detect leakages were made with the aid of the radioactive isotope 41Ar. Under conditions close to practice concerning pipe bedding, branching, pre-pressure, and leakage diameter, a leak with leakage rates as small as approx. 1 l/min could be measured with the aid of a towing probe with a precision of +-0.5 m. This accuracy is another advantage of this method. Branching and fittings with a big dead volume do not interfere with the evaluation. The investment for this method can be compared to other physical/technical investigations on mains, e.g. weld seam tests. (orig./LN)

  4. Leakage measurement during selective limb perfusion using a gamma probe

    International Nuclear Information System (INIS)

    The objective of this study was to establish a probe system for intraoperative quantitative leakage measurement during selective limb perfusion for adjuvant high-dose chemotherapy in patients with malignant melanomas. We used a portable gamma probe with digital display and investigated the physical properties in a phantom study simulating blood pool activity at different angles of the probe to the surface and different distances. In 20 patients the limb circulation was surgically separated from the systemic blood circulation, and the limb was then selectively perfused (cytostatics added) for 60 min. Initially, 15 MBq technetium-99m labelled autologous red blood cells was injected into the limb circulation, and an equal amount was kept as a standard. Every 10 min, blood samples were drawn from the body circulation and count rates were simultaneously measured by the probe system at the lower end of the sternal body. At the end of perfusion, the circulation of the limb was reconnected, the standard injected into the systemic circulation, and a blood sample drawn after 10 min. All blood samples were counted for calculation of leakage in terms of percent of the injected dose, and the results compared with the intraoperative count rates of the probe system. In the range of leakage observed in this study (0%-86%), the count rate of the probe system (corrected for blood volume, i.e. for body surface) correlated with the results of conventional measurement (r=0.92) according to the equation: %leakage=counts per s x 1.2 x body surface (m2)-1.19 In conclusion, the use of the described probe system is a feasible approach for leakage quantification which continuously yields data during selective limb perfusion. (orig.)

  5. A Web Resource for Standardized Benchmark Datasets, Metrics, and Rosetta Protocols for Macromolecular Modeling and Design.

    Directory of Open Access Journals (Sweden)

    Shane Ó Conchúir

    Full Text Available The development and validation of computational macromolecular modeling and design methods depend on suitable benchmark datasets and informative metrics for comparing protocols. In addition, if a method is intended to be adopted broadly in diverse biological applications, there needs to be information on appropriate parameters for each protocol, as well as metrics describing the expected accuracy compared to experimental data. In certain disciplines, there exist established benchmarks and public resources where experts in a particular methodology are encouraged to supply their most efficient implementation of each particular benchmark. We aim to provide such a resource for protocols in macromolecular modeling and design. We present a freely accessible web resource (https://kortemmelab.ucsf.edu/benchmarks to guide the development of protocols for protein modeling and design. The site provides benchmark datasets and metrics to compare the performance of a variety of modeling protocols using different computational sampling methods and energy functions, providing a "best practice" set of parameters for each method. Each benchmark has an associated downloadable benchmark capture archive containing the input files, analysis scripts, and tutorials for running the benchmark. The captures may be run with any suitable modeling method; we supply command lines for running the benchmarks using the Rosetta software suite. We have compiled initial benchmarks for the resource spanning three key areas: prediction of energetic effects of mutations, protein design, and protein structure prediction, each with associated state-of-the-art modeling protocols. With the help of the wider macromolecular modeling community, we hope to expand the variety of benchmarks included on the website and continue to evaluate new iterations of current methods as they become available.

  6. A Web Resource for Standardized Benchmark Datasets, Metrics, and Rosetta Protocols for Macromolecular Modeling and Design.

    Science.gov (United States)

    Ó Conchúir, Shane; Barlow, Kyle A; Pache, Roland A; Ollikainen, Noah; Kundert, Kale; O'Meara, Matthew J; Smith, Colin A; Kortemme, Tanja

    2015-01-01

    The development and validation of computational macromolecular modeling and design methods depend on suitable benchmark datasets and informative metrics for comparing protocols. In addition, if a method is intended to be adopted broadly in diverse biological applications, there needs to be information on appropriate parameters for each protocol, as well as metrics describing the expected accuracy compared to experimental data. In certain disciplines, there exist established benchmarks and public resources where experts in a particular methodology are encouraged to supply their most efficient implementation of each particular benchmark. We aim to provide such a resource for protocols in macromolecular modeling and design. We present a freely accessible web resource (https://kortemmelab.ucsf.edu/benchmarks) to guide the development of protocols for protein modeling and design. The site provides benchmark datasets and metrics to compare the performance of a variety of modeling protocols using different computational sampling methods and energy functions, providing a "best practice" set of parameters for each method. Each benchmark has an associated downloadable benchmark capture archive containing the input files, analysis scripts, and tutorials for running the benchmark. The captures may be run with any suitable modeling method; we supply command lines for running the benchmarks using the Rosetta software suite. We have compiled initial benchmarks for the resource spanning three key areas: prediction of energetic effects of mutations, protein design, and protein structure prediction, each with associated state-of-the-art modeling protocols. With the help of the wider macromolecular modeling community, we hope to expand the variety of benchmarks included on the website and continue to evaluate new iterations of current methods as they become available. PMID:26335248

  7. In vitro properties of an in situ forming gel for the parenteral delivery of macromolecular drugs.

    Science.gov (United States)

    Joshi, R; Robinson, D H; Himmelstein, K J

    1999-01-01

    The purpose of this research was to (i) formulate a solution of a water-insoluble interpolymeric complex (IPC) containing poly(methacrylic acid) (PMA), 15 kDa, and poly(ethylene glycol) (PEG), 20 kDa, in a biocompatible cosolvent system; (ii) demonstrate that the IPC solution can transform into a gel, in situ, at physiological pH; and (iii) determine the ability of the gel to entrap, protect, and control the release of macromolecular drugs such as proteins and oligonucleotides. Ternary phase diagrams were prepared to identify cosolvent composition containing N-methylpyrrolidone (NMP), ethanol, and water that dissolve the IPC. IPC solutions (40, 50, or 60% w/v) each containing 1 mg of either model proteins, fluorescein isothiocyanate (FITC)-insulin and FITC-albumin, or 24-mer phosphorothioate oligonucleotides, were placed in containers that were immersed in buffer, pH 7.4. Aliquots of the buffer were sampled periodically and analyzed for the macromolecular content. In addition, in vitro bioactivity of another model protein, alpha-amylase, contained in the IPC solution was also determined. The studies demonstrated that a cosolvent containing 1:1:2 ratio of NMP/ethanol/water was most suitable for dissolving the IPC. Concentrations > 30% w/v IPC were required to form the gel, however, those mixtures containing > 60% w/v IPC could not be easily injected via 18-22 gauge needle. The gel can entrap and control the release of the model macromolecules for up to 6 days, in vitro. In addition, the gel can maintain the bioactivity of the protein, alpha-amylase, for 6 days. Therefore, an IPC gel can entrap, protect, and control the release of macromolecular drugs over a period of 6 days, in vitro, and therefore can be considered for in vivo investigation. PMID:10578505

  8. Remote Access to the PXRR Macromolecular Crystallography Facilities at the NSLS

    Energy Technology Data Exchange (ETDEWEB)

    A Soares; D Schneider; J Skinner; M Cowan; R Buono; H Robinson; A Heroux; M Carlucci-Dayton; A Saxena; R Sweet

    2011-12-31

    The most recent surge of innovations that have simplified and streamlined the process of determining macromolecular structures by crystallography owes much to the efforts of the structural genomics community. However, this was only the last step in a long evolution that saw the metamorphosis of crystallography from an heroic effort that involved years of dedication and skill into a straightforward measurement that is occasionally almost trivial. Many of the steps in this remarkable odyssey involved reducing the physical labor that is demanded of experimenters in the field. Other steps reduced the technical expertise required for conducting those experiments.

  9. Remote Access to the PXRR Macromolecular Crystallography Facilities at the NSLS

    International Nuclear Information System (INIS)

    The most recent surge of innovations that have simplified and streamlined the process of determining macromolecular structures by crystallography owes much to the efforts of the structural genomics community. However, this was only the last step in a long evolution that saw the metamorphosis of crystallography from an heroic effort that involved years of dedication and skill into a straightforward measurement that is occasionally almost trivial. Many of the steps in this remarkable odyssey involved reducing the physical labor that is demanded of experimenters in the field. Other steps reduced the technical expertise required for conducting those experiments.

  10. Remote Access to the PXRR Macromolecular Crystallography Facilities at the NSLS

    Energy Technology Data Exchange (ETDEWEB)

    Soares, A.S.; Schneider, D. K.; Skinner, J. M.; Cowan, M.; Buono, R.; Robinson, H. H.; Heroux, A.; Carlucci-Dayton, M.; Saxena, A.; Sweet, R. M.

    2008-09-01

    The most recent surge of innovations that have simplified and streamlined the process of determining macromolecular structures by crystallography owes much to the efforts of the structural genomics community. However, this was only the last step in a long evolution that saw the metamorphosis of crystallography from an heroic effort that involved years of dedication and skill into a straightforward measurement that is occasionally almost trivial. Many of the steps in this remarkable odyssey involved reducing the physical labor that is demanded of experimenters in the field. Other steps reduced the technical expertise required for conducting those experiments.

  11. INFLUENCE OF THE SOLVENT SWELLING ON MACROMOLECULAR CHOLESTERIC LIQUID CRYSTALLINE STRUCTURE

    Institute of Scientific and Technical Information of China (English)

    Jia Zeng; Yong Huang

    1999-01-01

    Ethyl-cyanoethyl cellulose [(E-CE)C]/cross-linked polyacrylic acid [PAA] molecular composites with cholesteric order were prepared. It was found that the macromolecular cholesteric structure was changed with the swelling of PAA in the composites. The selective reflection of the cholesteric phase shifted to the longer wavelength and the X-ray diffraction angle shifted to the high angle direction during swelling, which suggested that the cholesteric pitch and the number of the layers of ordered (E-CE)C chains in the cholesteric phase were increased.

  12. The "macromolecular tourist": universal temperature dependence of thermal diffusion in aqueous colloidal suspensions.

    Science.gov (United States)

    Iacopini, S; Rusconi, R; Piazza, R

    2006-01-01

    By performing measurements on a large class of macromolecular and colloidal systems, we show that thermophoresis (particle drift induced by thermal gradients) in aqueous solvents displays a distinctive universal dependence on temperature. For systems of particles interacting via temperature-independent forces, this behavior is strictly related to the solvent thermal expansivity, while an additional, T-independent term is needed to account for the behavior of "thermophilic" (migrating to the warmth) particles. The former relation between thermophoresis and thermal expansion may be exploited to envisage other fruitful studies of colloidal diffusion in inhomogeneous fluids. PMID:16446985

  13. Accurate macromolecular structures using minimal measurements from X-ray free-electron lasers

    Science.gov (United States)

    Hattne, Johan; Echols, Nathaniel; Tran, Rosalie; Kern, Jan; Gildea, Richard J.; Brewster, Aaron S.; Alonso-Mori, Roberto; Glöckner, Carina; Hellmich, Julia; Laksmono, Hartawan; Sierra, Raymond G.; Lassalle-Kaiser, Benedikt; Lampe, Alyssa; Han, Guangye; Gul, Sheraz; DiFiore, Dörte; Milathianaki, Despina; Fry, Alan R.; Miahnahri, Alan; White, William E.; Schafer, Donald W.; Seibert, M. Marvin; Koglin, Jason E.; Sokaras, Dimosthenis; Weng, Tsu-Chien; Sellberg, Jonas; Latimer, Matthew J.; Glatzel, Pieter; Zwart, Petrus H.; Grosse-Kunstleve, Ralf W.; Bogan, Michael J.; Messerschmidt, Marc; Williams, Garth J.; Boutet, Sébastien; Messinger, Johannes; Zouni, Athina; Yano, Junko; Bergmann, Uwe; Yachandra, Vittal K.; Adams, Paul D.; Sauter, Nicholas K.

    2014-01-01

    X-ray free-electron laser (XFEL) sources enable the use of crystallography to solve three-dimensional macromolecular structures under native conditions and free from radiation damage. Results to date, however, have been limited by the challenge of deriving accurate Bragg intensities from a heterogeneous population of microcrystals, while at the same time modeling the X-ray spectrum and detector geometry. Here we present a computational approach designed to extract statistically significant high-resolution signals from fewer diffraction measurements. PMID:24633409

  14. Biodegradable multiblock polymers based on N-(2-hydroxypropyl) methacrylamide for preparation of macromolecular therapeutics

    Czech Academy of Sciences Publication Activity Database

    Mužíková, Gabriela; Pola, Robert; Laga, Richard; Pechar, Michal

    Bratislava : Young Scientists Council of Polymer Institute of Slovak Academy of Sciences, 2016. s. 79. ISBN 978-80-970923-8-2. [Bratislava Young Polymer Scientists workshop /6./ - BYPoS 2016. 14.03.2016-18.03.2016, Ždiar] R&D Projects: GA ČR(CZ) GA14-12742S; GA MŠk(CZ) LQ1604; GA MŠk(CZ) LO1507; GA ČR(CZ) GJ16-14957Y Institutional support: RVO:61389013 Keywords : multiblock polymers * RAFT polymerization * biodegradation Subject RIV: CD - Macromolecular Chemistry

  15. Relations between functionality and macromolecular properties of alterated coals: the behaviour in solubility and swelling

    Energy Technology Data Exchange (ETDEWEB)

    Kuznetsov, P.N.; Gruber, R.; Bimer, J.; Salbut, P.D.; Djega-Mariadassou, G.; Kruchinin, A.V.; Kuznetsova, L.I. [Institute of Chemistry and Chemico-Metallurgical Processes, Krasnoyarsk (Russian Federation)

    1995-12-31

    Describes the study of the effects of chemical alteration of brown and bituminous coals on the solubility and swelling behaviour. A variety of chemical procedures such as ion-exchange with HCl, O-methylation and reductive methylation, reduction with LiAlH{sub 4} and with K/isopropanol in THF and oxidation with performic acid was applied in order to vary the oxygen functionality, the content of the alkyl substitutes and the proportion of aromatic to hydroaromatic rings. The extent of degradation of the macromolecular structure was evaluated as a function of chemical alteration. 6 refs., 2 tabs.

  16. Molecularly imprinted polymers for separating and sensing of macromolecular compounds and microorganisms.

    Science.gov (United States)

    Iskierko, Zofia; Sharma, Piyush Sindhu; Bartold, Katarzyna; Pietrzyk-Le, Agnieszka; Noworyta, Krzysztof; Kutner, Wlodzimierz

    2016-01-01

    The present review article focuses on gathering, summarizing, and critically evaluating the results of the last decade on separating and sensing macromolecular compounds and microorganisms with the use of molecularly imprinted polymer (MIP) synthetic receptors. Macromolecules play an important role in biology and are termed that way to contrast them from micromolecules. The former are large and complex molecules with relatively high molecular weights. The article mainly considers chemical sensing of deoxyribonucleic acids (DNAs), proteins and protein fragments as well as sugars and oligosaccharides. Moreover, it briefly discusses fabrication of chemosensors for determination of bacteria and viruses that can ultimately be considered as extremely large macromolecules. PMID:26656748

  17. The influence of interchain coupling on intramolecular oscillation mobility in coupled macromolecular chains: The case of coplanar parallel chains

    Science.gov (United States)

    Čevizović, D.; Petković, S.; Galović, S.; Chizhov, A.; Reshetnyak, A.

    2015-10-01

    We enlarge our results from the study of the hopping mechanism of the oscillation excitation transport in 1D model of one biologica-likel macromolecular chain to the case of a system composed from two 1D parallel macromolecular chains with consideration of the properties of intramolecular oscillation excitations. We suppose, that due to the exciton interaction with thermal oscillation (generated by mechanical phonon subsystem) of structural elements (consisting of the peptide group) of the chains, the exciton becomes by self trapped and forms the polaron state. We suggest a model which generalizes the modified Holstein polaron model to the case of two macromolecular chains and find that because of the interchain coupling, the exciton energy band is splitted into two subbands. The hopping process of exciton migration along the macromolecular chains is studied in dependence of system parameters and temperature. We pay an special attention to the temperature range (near T = 300 K) in which living cells operate. It is found that for the certain values of the system parameters there exists the abrupt change of the exciton migration nature from practically free (light) exciton motion to an immobile (heavy, dressed by phonon cloud) quasiparticle We discuss an application of the obtained results to the exciton transport both within deoxyribonucleic acid molecule and in the 2D polymer films organized from such macromolecular chains.

  18. Study on leakage via the radial clearance in a novel synchronal rotary refrigeration compressor

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Hua; Qu, Zongchang; Zhou, Hui; Yu, Bingfeng [School of Energy and Power Engineering, Xi' an Jiaotong University, 28 Xianning West Road, Xi' an, Shaanxi 710049 (China)

    2011-01-15

    The leakage flow characteristics at the radial clearance between the rotor and the cylinder in a novel synchronal rotary (SR) refrigeration compressor were analyzed, and the oil-refrigerant two-phase leakage flow model was established. The leakage at different temperatures caused by wall velocity and pressure difference was calculated, and their influences on the total leakage were analyzed, respectively. The calculation results indicate that the leakage of the oil-refrigerant mixture decreases firstly and then increases with the increase in the temperature. However, the refrigerant leakage always decreases when the temperature increases. Moreover, the leakage caused by wall velocity has great influence on the total leakage, especially when the radial clearance is small. (author)

  19. Can intraluminal devices prevent or reduce colorectal anastomotic leakage: A review

    OpenAIRE

    2011-01-01

    Colorectal anastomotic leakage is a serious complication of colorectal surgery, leading to high morbidity and mortality rates. In recent decades, many strategies aimed at lowering the incidence of anastomotic leakage have been examined. The focus of this review will be on mechanical aids protecting the colonic anastomosis against leakage. A literature search was performed using MEDLINE, EMBASE, and The Cochrane Collaborative library for all papers related to prevention of anastomotic leakage ...

  20. A Proposal for the Attribution of Market Leakage to CDM Projects

    OpenAIRE

    Kuosmanen, Timo; Vöhringer, Frank; Dellink, Rob B.

    2004-01-01

    Economic models suggest that in many cases, market leakage rates of greenhouse gas abatement reach the two-digit percentage range. Consequently, the Marrakesh Accords require Clean Development Mechanism (CDM) projects to account for leakage. Despite this, most project proponents neglect market leakage for their project, because the influence of an individual project on market prices seems to be negligible. Insufficient leakage accounting is facilitated by a lack of theories and applicable pro...

  1. Perioperative Statin Therapy Is Not Associated With Reduced Risk of Anastomotic Leakage After Colorectal Resection

    DEFF Research Database (Denmark)

    Bisgård, Anne Sofie; Noack, Morten Westergaard; Klein, Mads;

    2013-01-01

    Anastomotic leakage is a serious complication of colorectal surgery. Several studies have demonstrated the beneficial pleiotropic effects of statins, and preliminary studies have suggested that perioperative statin treatment may be associated with reduced risk of anastomotic leakage.......Anastomotic leakage is a serious complication of colorectal surgery. Several studies have demonstrated the beneficial pleiotropic effects of statins, and preliminary studies have suggested that perioperative statin treatment may be associated with reduced risk of anastomotic leakage....

  2. Influence of macromolecular architecture on necking in polymer extrusion film casting process

    International Nuclear Information System (INIS)

    Extrusion film casting (EFC) is an important polymer processing technique that is used to produce several thousand tons of polymer films/coatings on an industrial scale. In this research, we are interested in understanding quantitatively how macromolecular chain architecture (for example long chain branching (LCB) or molecular weight distribution (MWD or PDI)) influences the necking and thickness distribution of extrusion cast films. We have used different polymer resins of linear and branched molecular architecture to produce extrusion cast films under controlled experimental conditions. The necking profiles of the films were imaged and the velocity profiles during EFC were monitored using particle tracking velocimetry (PTV) technique. Additionally, the temperature profiles were captured using an IR thermography and thickness profiles were calculated. The experimental results are compared with predictions of one-dimensional flow model of Silagy et al1 wherein the polymer resin rheology is modeled using molecular constitutive equations such as the Rolie-Poly (RP) and extended Pom Pom (XPP). We demonstrate that the 1-D flow model containing the molecular constitutive equations provides new insights into the role of macromolecular chain architecture on film necking.1D. Silagy, Y. Demay, and J-F. Agassant, Polym. Eng. Sci., 36, 2614 (1996)

  3. MRI characterization of tumors and grading angiogenesis using macromolecular contrast media: status report

    International Nuclear Information System (INIS)

    Magnetic resonance imaging (MRI) enhanced with a macromolecular contrast medium (MMCM) has been applied successfully to assay tumor microvascular characteristics. These MRI-assayed characteristics correlate closely with histologic microvascular density, an established surrogate of tumor angiogenesis, and with pathologic tumor grade. The utility of MMCM-enhanced MRI for tumor characterizations has been established experimentally in a range of cancer types including breast, ovary, fibrosarcoma, and prostate. The MMCM-enhanced MRI technique can also be applied to monitor changes in tumor vessels that result from administration of an angiogenesis inhibitor, antibody against vascular endothelial growth factor (VEGF). Suppression of microvascular permeability (up to 98%) induced by this inhibitor of angiogenesis was detected and quantified as soon as 24 h after initiation of therapy. Thus, MRI assays of tumor microvascular characteristics, particularly macromolecular permeability, provide a means to non-invasively characterize tumors for prognostication, for individualization and optimization of treatment, and for monitoring therapeutic response. Pending successful completion of drug trials, now in progress, the availability of MMCM should permit the immediate application of these powerful techniques in clinical practice

  4. A new paradigm for macromolecular crystallography beamlines derived from high-pressure methodology and results

    International Nuclear Information System (INIS)

    Macromolecular crystallography at high pressure (HPMX) is a mature technique. Shorter X-ray wavelengths increase data collection efficiency on cryocooled crystals. Extending applications and exploiting spin-off of HPMX will require dedicated synchrotron radiation beamlines based on a new paradigm. Biological structures can now be investigated at high resolution by high-pressure X-ray macromolecular crystallography (HPMX). The number of HPMX studies is growing, with applications to polynucleotides, monomeric and multimeric proteins, complex assemblies and even a virus capsid. Investigations of the effects of pressure perturbation have encompassed elastic compression of the native state, study of proteins from extremophiles and trapping of higher-energy conformers that are often of biological interest; measurements of the compressibility of crystals and macromolecules were also performed. HPMX results were an incentive to investigate short and ultra-short wavelengths for standard biocrystallography. On cryocooled lysozyme crystals it was found that the data collection efficiency using 33 keV photons is increased with respect to 18 keV photons. This conclusion was extended from 33 keV down to 6.5 keV by exploiting previously published data. To be fully exploited, the potential of higher-energy photons requires detectors with a good efficiency. Accordingly, a new paradigm for MX beamlines was suggested, using conventional short and ultra-short wavelengths, aiming at the collection of very high accuracy data on crystals under standard conditions or under high pressure. The main elements of such beamlines are outlined

  5. A new paradigm for macromolecular crystallography beamlines derived from high-pressure methodology and results

    Energy Technology Data Exchange (ETDEWEB)

    Fourme, Roger, E-mail: roger.fourme@synchrotron-soleil.fr [Synchrotron SOLEIL, BP 48, Saint Aubin, 91192 Gif-sur-Yvette (France); Girard, Eric [IBS (UMR 5075 CEA-CNRS-UJF-PSB), 41 rue Jules Horowitz, 38027 Grenoble Cedex (France); Dhaussy, Anne-Claire [CRISMAT, ENSICAEN, 6 Boulevard du Maréchal Juin, 14000 Caen (France); Medjoubi, Kadda [Synchrotron SOLEIL, BP 48, Saint Aubin, 91192 Gif-sur-Yvette (France); Prangé, Thierry [LCRB (UMR 8015 CNRS), Université Paris Descartes, Faculté de Pharmacie, 4 avenue de l’Observatoire, 75270 Paris (France); Ascone, Isabella [ENSCP (UMR CNRS 7223), 11 rue Pierre et Marie Curie, 75231 Paris Cedex 05 (France); Mezouar, Mohamed [ESRF, BP 220, 38043 Grenoble (France); Kahn, Richard [IBS (UMR 5075 CEA-CNRS-UJF-PSB), 41 rue Jules Horowitz, 38027 Grenoble Cedex (France)

    2011-01-01

    Macromolecular crystallography at high pressure (HPMX) is a mature technique. Shorter X-ray wavelengths increase data collection efficiency on cryocooled crystals. Extending applications and exploiting spin-off of HPMX will require dedicated synchrotron radiation beamlines based on a new paradigm. Biological structures can now be investigated at high resolution by high-pressure X-ray macromolecular crystallography (HPMX). The number of HPMX studies is growing, with applications to polynucleotides, monomeric and multimeric proteins, complex assemblies and even a virus capsid. Investigations of the effects of pressure perturbation have encompassed elastic compression of the native state, study of proteins from extremophiles and trapping of higher-energy conformers that are often of biological interest; measurements of the compressibility of crystals and macromolecules were also performed. HPMX results were an incentive to investigate short and ultra-short wavelengths for standard biocrystallography. On cryocooled lysozyme crystals it was found that the data collection efficiency using 33 keV photons is increased with respect to 18 keV photons. This conclusion was extended from 33 keV down to 6.5 keV by exploiting previously published data. To be fully exploited, the potential of higher-energy photons requires detectors with a good efficiency. Accordingly, a new paradigm for MX beamlines was suggested, using conventional short and ultra-short wavelengths, aiming at the collection of very high accuracy data on crystals under standard conditions or under high pressure. The main elements of such beamlines are outlined.

  6. Oral delivery of macromolecular drugs: Where we are after almost 100years of attempts.

    Science.gov (United States)

    Moroz, Elena; Matoori, Simon; Leroux, Jean-Christophe

    2016-06-01

    Since the first attempt to administer insulin orally in humans more than 90years ago, the oral delivery of macromolecular drugs (>1000g/mol) has been rather disappointing. Although several clinical pilot studies have demonstrated that the oral absorption of macromolecules is possible, the bioavailability remains generally low and variable. This article reviews the formulations and biopharmaceutical aspects of orally administered biomacromolecules on the market and in clinical development for local and systemic delivery. The most successful approaches for systemic delivery often involve a combination of enteric coating, protease inhibitors and permeation enhancers in relatively high amounts. However, some of these excipients have induced local or systemic adverse reactions in preclinical and clinical studies, and long-term studies are often missing. Therefore, strategies aimed at increasing the oral absorption of macromolecular drugs should carefully take into account the benefit-risk ratio. In the absence of specific uptake pathways, small and potent peptides that are resistant to degradation and that present a large therapeutic window certainly represent the best candidates for systemic absorption. While we acknowledge the need for systemically delivering biomacromolecules, it is our opinion that the oral delivery to local gastrointestinal targets is currently more promising because of their accessibility and the lacking requirement for intestinal permeability enhancement. PMID:26826437

  7. Macromolecular Crowding Studies of Amino Acids Using NMR Diffusion Measurements and Molecular Dynamics Simulations

    Directory of Open Access Journals (Sweden)

    Amninder S Virk

    2015-02-01

    Full Text Available Molecular crowding occurs when the total concentration of macromolecular species in a solution is so high that a considerable proportion of the volume is physically occupied and therefore not accessible to other molecules. This results in significant changes in the solution properties of the molecules in such systems. Macromolecular crowding is ubiquitous in biological systems due to the generally high intracellular protein concentrations. The major hindrance to understanding crowding is the lack of direct comparison of experimental data with theoretical or simulated data. Self-diffusion is sensitive to changes in the molecular weight and shape of the diffusing species, and the available diffusion space (i.e., diffusive obstruction. Consequently, diffusion measurements are a direct means for probing crowded systems including the self-association of molecules. In this work, nuclear magnetic resonance measurements of the self-diffusion of four amino acids (glycine, alanine, valine and phenylalanine up to their solubility limit in water were compared directly with molecular dynamics simulations. The experimental data were then analyzed using various models of aggregation and obstruction. Both experimental and simulated data revealed that the diffusion of both water and the amino acids were sensitive to the amino acid concentration. The direct comparison of the simulated and experimental data afforded greater insights into the aggregation and obstruction properties of each amino acid.

  8. Can visco-elastic phase separation, macromolecular crowding and colloidal physics explain nuclear organisation?

    Directory of Open Access Journals (Sweden)

    Iborra Francisco J

    2007-04-01

    Full Text Available Abstract Background The cell nucleus is highly compartmentalized with well-defined domains, it is not well understood how this nuclear order is maintained. Many scientists are fascinated by the different set of structures observed in the nucleus to attribute functions to them. In order to distinguish functional compartments from non-functional aggregates, I believe is important to investigate the biophysical nature of nuclear organisation. Results The various nuclear compartments can be divided broadly as chromatin or protein and/or RNA based, and they have very different dynamic properties. The chromatin compartment displays a slow, constrained diffusional motion. On the other hand, the protein/RNA compartment is very dynamic. Physical systems with dynamical asymmetry go to viscoelastic phase separation. This phase separation phenomenon leads to the formation of a long-lived interaction network of slow components (chromatin scattered within domains rich in fast components (protein/RNA. Moreover, the nucleus is packed with macromolecules in the order of 300 mg/ml. This high concentration of macromolecules produces volume exclusion effects that enhance attractive interactions between macromolecules, known as macromolecular crowding, which favours the formation of compartments. In this paper I hypothesise that nuclear compartmentalization can be explained by viscoelastic phase separation of the dynamically different nuclear components, in combination with macromolecular crowding and the properties of colloidal particles. Conclusion I demonstrate that nuclear structure can satisfy the predictions of this hypothesis. I discuss the functional implications of this phenomenon.

  9. A NEW UNSTEADY THREE DIMENSIONAL MODEL FOR MACROMOLECULAR TRANSPORT AND WATER FILTRATION ACROSS THE ARTERIAL WALL

    Institute of Scientific and Technical Information of China (English)

    黄浩; 温功碧

    2001-01-01

    A new unsteady three-dimensional convective-diffusive mathematical model for the transportation of macromolecules and water across the arterial wall was proposed . After the formation of leaky junctions due to the mitosis of endothelial cell of the arterial wall, the macromolecular transport happens surrounding the leaky cells. The arterial wall was divided into four layers: the endothelial layer, the subendothelial intima, the internal elastic lamina and the media for the convenience of research. The time-dependent concentration growth,the effect of the shape of endothelial cell and the effect of physiological parameters were analyzed. The analytical solution of velocity field and pressure field of water flow across the arterial wall were obtained; and concentration distribution of three macromolecules ; LDL,HRP and Albumin, were calculated with numerical simulation method. The new theory predicts, the maximum and distribution areas of time dependent concentration with round shape endothelial cell are both larger than that with ellipse-shape endothelial cell. The model also predicts the concentration growth is much alike that of a two-dimensional model and it shows that the concentration reaches its peak at the leaky junction where atherosclerotic formation frequently occurs and falls down rapidly in a limited area beginning from its earlier time growth to the state when macromolecular transfer approaches steadily. These predictions of the new model are in agreement with the experimental observation for the growth and concentration distribution of LDL and Albumin.

  10. New ac microammeter for leakage current measurement of biomedical equipment

    Science.gov (United States)

    Branca, F. P.; Del Prete, Z.; Marinozzi, F.

    1993-11-01

    A new inexpensive current probe for on-line leakage current measurement of biomedical devices in hospital environment is described. The prototype is designed to detect and measure leakage currents on the ground wire of the device's power cord so that its integrity can be monitored in real time. Realized with a sensing coil specially matched to a low-noise op amp, this probe adds only negligible impedance on the monitored ground lines. From this preliminary study about the device's metrological performances, a sensitivity of 10 nArms for a current range 1-500 μArms has emerged, together with a mean linearity error of 0.03% and a frequency response flat within 1% of gain from 50 to 2000 Hz.

  11. Mission analysis report for single-shell tank leakage mitigation

    Energy Technology Data Exchange (ETDEWEB)

    Cruse, J.M.

    1994-09-01

    This document provides an analysis of the leakage mitigation mission applicable to past and potential future leakage from the Hanford Site`s 149 single-shell high-level waste tanks. This mission is a part of the overall missions of the Westinghouse Hanford Company Tank Waste Remediation System division to remediate the tank waste in a safe and acceptable manner. Systems engineers principles are being applied to this effort. Mission analysis supports early decision making by clearly defining program objectives. This documents identifies the initial conditions and acceptable final conditions, defines the programmatic and physical interfaces and constraints, estimates the resources to carry out the mission, and establishes measures of success. The results of the mission analysis provide a consistent basis for subsequent systems engineering work.

  12. Turbocharger with sliding piston, and having vanes and leakage dams

    Science.gov (United States)

    Roberts, Quentin; Alnega, Ahmed

    2011-12-06

    A turbocharger having a sliding piston for regulating exhaust gas flow into the turbine wheel includes a set of first vanes mounted on a fixed first wall of the turbine nozzle and projecting axially toward an opposite second wall of the nozzle, and/or a set of second vanes mounted on the end of the piston and projecting in an opposite axial direction toward the first wall of the nozzle. For the/each set of vanes, there are leakage dams formed on the wall that is adjacent the vane tips when the piston is closed. The leakage dams are closely adjacent the vane tips and discourage exhaust gas from leaking in a generally radial direction past the vane tips as the piston just begins to open from its fully closed position.

  13. A software sampling frequency adaptive algorithm for reducing spectral leakage

    Institute of Scientific and Technical Information of China (English)

    PAN Li-dong; WANG Fei

    2006-01-01

    Spectral leakage caused by synchronous error in a nonsynchronous sampling system is an important cause that reduces the accuracy of spectral analysis and harmonic measurement.This paper presents a software sampling frequency adaptive algorithm that can obtain the actual signal frequency more accurately,and then adjusts sampling interval base on the frequency calculated by software algorithm and modifies sampling frequency adaptively.It can reduce synchronous error and impact of spectral leakage;thereby improving the accuracy of spectral analysis and harmonic measurement for power system signal where frequency changes slowly.This algorithm has high precision just like the simulations show,and it can be a practical method in power system harmonic analysis since it can be implemented easily.

  14. The root caused analysis of leakaged heat exchanger tube

    International Nuclear Information System (INIS)

    AISI type 316L stainless steel was used as a heat exchanger tube material in an inter-cooler column. After less than a year of operation, severe corrosion failures occurred and a transverse opening leakage was observed on one of the heat exchanger tubes. The failed tube was carefully analyzed using various metallurgical laboratory equipments. The root cause of the tube leakage was believed due to the presence of horizontal micro and macro pores as a hydrogen gas entrapment during casting of the parent ingot. The overlapped and gaping pores formed notch on the shell side of the tube surface, and it increasingly evident when the use of a high-energy water-jet and metal brush as cleaning procedure results in an establishment of pitting type local-action corrosion cells penetrated the tube wall. As a result, corrosive fluid in the tube side dissolved into the cooling water, accelerating the corrosion process.

  15. An advanced leakage scheme for neutrino treatment in astrophysical simulations

    CERN Document Server

    Perego, Albino; Käppeli, Roger

    2015-01-01

    We present an Advanced Spectral Leakage (ASL) scheme to model neutrinos in the context of core-collapse supernovae and compact binary mergers. Based on previous gray leakage schemes, the ASL scheme computes the neutrino cooling rates by interpolating local production and diffusion rates (relevant in optically thin and thick regimes, respectively), separately for discretized values of the neutrino energy. Neutrino trapped components are also modeled, based on equilibrium and timescale arguments. The better accuracy achieved by the spectral treatment allows a more reliable computation of neutrino heating rates in optically thin conditions. The scheme has been calibrated and tested against Boltzmann transport in the context of Newtonian spherically symmetric models of core-collapse supernovae. ASL shows a very good qualitative and a partial quantitative agreement, for key quantities from collapse to a few hundreds of milliseconds after core bounce. We have proved the adaptability and flexibility of our ASL schem...

  16. Impact of the Indonesian Throughflow on Agulhas leakage

    Directory of Open Access Journals (Sweden)

    D. Le Bars

    2013-09-01

    Full Text Available Using ocean models of different complexity we show that opening the Indonesian Passage between the Pacific and the Indian oceans increases the input of Indian Ocean water into the South Atlantic via the Agulhas leakage. In a strongly eddying global ocean model this response results from an increased Agulhas Current transport and a constant proportion of Agulhas retroflection south of Africa. The leakage increases through an increased frequency of ring shedding events. In an idealized two-layer and flat-bottom eddy resolving model, the proportion of the Agulhas Current transport that retroflects is (for a wide range of wind stress forcing not affected by an opening of the Indonesian Passage. Using a comparison with a linear model and previous work on the retroflection problem, the result is explained as a balance between two mechanisms: decrease retroflection due to large-scale momentum balance and increase due to local barotropic/baroclinic instabilities.

  17. Anastomotic leakage after anterior resection for rectal cancer: risk factors

    DEFF Research Database (Denmark)

    Bertelsen, C A; Andreasen, A H; Jørgensen, Torben;

    2010-01-01

    OBJECTIVE: The study aimed to identify risk factors for clinical anastomotic leakage (AL) after anterior resection for rectal cancer in a consecutive national cohort. METHOD: All patients with an initial first diagnosis of colorectal adenocarcinoma were prospectively registered in a national...... database. The register included 1495 patients who had had a curative anterior resection between May 2001 and December 2004. The association of a number of patient- and procedure-related factors with clinical AL after anterior resection was analysed in a cohort design. RESULTS: Anastomotic leakages occurred...... in 163 (11%) patients. In a multivariate analysis, the risk of AL was significantly increased in patients with tumours located below 10 cm from the anal verge if no faecal diversion was undertaken (OR 5.37 5 cm (tumour level from anal verge), 95% CI 2.10-13.7, OR 3.57 7 cm, CI 1.81-7.07 and OR 1...

  18. Correlation among ESDD, NSDD and leakage current in distribution insulators

    International Nuclear Information System (INIS)

    The maintenance of distribution networks is more effective if the insulation contamination levels are known. The selection of measuring methods of pollution levels is then crucial. The relationship between several evaluation methods of pollution levels and the operating behaviour of several insulator profiles in a polluted zone is described. Laboratory tests were carried out to reproduce pollution levels found in the field. The quantity of non-soluble materials deposited over the insulators' surface affect the magnitude of the leakage current generated over a contaminated insulator. The relationship that defines leakage current with respect to the equivalent salt deposit density (ESDD) level for a specific non-soluble material level is almost linear, from which it is possible to develop a relationship between them for each insulator. (author)

  19. Leakage currents in 4H-SiC JBS diodes

    Energy Technology Data Exchange (ETDEWEB)

    Ivanov, P. A., E-mail: Pavel.Ivanov@mail.ioffe.ru; Grekhov, I. V.; Potapov, A. S.; Kon' kov, O. I.; Il' inskaya, N. D.; Samsonova, T. P. [Russian Academy of Sciences, Ioffe Physical Technical Institute (Russian Federation); Korol' kov, O.; Sleptsuk, N. [Tallinn University of Technology, Department of Electronics (Estonia)

    2012-03-15

    Leakage currents in high-voltage 4H-SiC diodes, which have an integrated (p-n) Schottky structure (Junction Barrier Schottky, JBS), have been studied using commercial diodes and specially fabricated (based on a commercial epitaxial material) test Schottky diodes with and without the JBS structure. It is shown that (i) the main role in reverse charge transport is played by SiC crystal structure defects, most probably, by threading dislocations (density {approx}10{sup 4} cm{sup -2}), and (ii) the JBS structure, formed by the implantation of boron, partially suppresses the leakage currents (by up to a factor of 10 at optimal separation, 8 {mu}m between local p-type regions).

  20. Allocation of emission permits with leakage through capital markets

    International Nuclear Information System (INIS)

    This paper analyses how tradable emission permits should be allocated to firms when capital is internationally mobile. When international environmental problems are attempted solved through uncoordinated policies between countries, it might be desirable for the home country to issue free emission permits in proportion to the use of capital in order to prevent leakage through international capital movements. The desirability of free emission permits will however be reduced if capital also can be employed in a domestic non-polluting sector. In this case, it may even be optimal to tax the use of capital in the polluting sector. It is also shown that it is always optimal to subsidise the use of capital in the polluting sector if the use of labour is taxed at an optimal rate. Finally, leakage does not affect the optimal domestic emission limit as long as appropriate capital subsidies and labour taxes are implementeed. (author)

  1. Support calculations for management of PRISE leakage accidents

    Energy Technology Data Exchange (ETDEWEB)

    Matejovic, P.; Vranka, L. [Nuclear Power Plants Research Inst. Vuje, Trnava (Slovakia)

    1997-12-31

    Accidents involving primary-to-secondary leakage (PRISE) caused by rupture of one or a few tubes are well known design basis events in both, western and VVER NPPs. Operating experience and in-service inspections of VVER-440 units have demonstrated also the potential for large PRISE leaks in the case of the steam generator (SG) primary collector cover lift-up (Rovno NPP). Without performing any countermeasure for limitation of SG collector cover lift-up, a full opening results in PRISE leak with an equivalent diameter 107 mm. Although this accident was not considered in the original design, this event is usually analysed as DBA too. Different means are available for detection and mitigation of PRISE leakage in NPPs currently in operation (J.Bohunice V-1 and V-2) or under construction (Mochovce) in Slovakia. 8 refs.

  2. Model-Based Detection of Pipe Leakage at Joints

    International Nuclear Information System (INIS)

    Time domain reflectometry (TDR) is widely used for wire failure detection. It transmits a pulse that is reflected at the boundaries of different characteristic impedances. By analyzing the reflected signal, TDR makes it possible to locate the failure. In this study, TDR was used to detect the water leakage at a pipe joint. A wire attached to the pipe surface was soaked by water when a leak occurred, which affected the characteristic impedance of the wet part, resulting in a change in the reflected signal. To infer the leakage from the TDR signal, we first developed a finite difference time domain-based forward model that provided the output of the TDR signal given the configuration of the transmission line. Then, by solving the inverse problem, the locations of the leaks were found

  3. Distributed public key schemes secure against continual leakage

    DEFF Research Database (Denmark)

    Akavia, Adi; Goldwasser, Shafi; Hazay, Carmit

    2012-01-01

    In this work we study distributed public key schemes secure against continual memory leakage. The secret key will be shared among two computing devices communicating over a public channel, and the decryption operation will be computed by a simple 2-party protocol between the devices. Similarly, the...... value of the respective function on the internal state of the respective device (namely, on its secret share, internal randomness, and results of intermediate computations). We present distributed public key encryption (DPKE) and distributed identity based encryption (DIBE) schemes that are secure...... CCA2-secure against continual memory leakage. Our DPKE scheme also implies a secure storage system on leaky devices, where a value s can be secretely stored on devices that continually leak information about their internal state to an external attacker. The devices go through a periodic refresh...

  4. Mission analysis report for single-shell tank leakage mitigation

    International Nuclear Information System (INIS)

    This document provides an analysis of the leakage mitigation mission applicable to past and potential future leakage from the Hanford Site's 149 single-shell high-level waste tanks. This mission is a part of the overall missions of the Westinghouse Hanford Company Tank Waste Remediation System division to remediate the tank waste in a safe and acceptable manner. Systems engineers principles are being applied to this effort. Mission analysis supports early decision making by clearly defining program objectives. This documents identifies the initial conditions and acceptable final conditions, defines the programmatic and physical interfaces and constraints, estimates the resources to carry out the mission, and establishes measures of success. The results of the mission analysis provide a consistent basis for subsequent systems engineering work

  5. 40 CFR 86.166-12 - Method for calculating emissions due to air conditioning leakage.

    Science.gov (United States)

    2010-07-01

    ... to air conditioning leakage. 86.166-12 Section 86.166-12 Protection of Environment ENVIRONMENTAL... for calculating emissions due to air conditioning leakage. This section describes procedures used to determine a refrigerant leakage rate in grams per year from vehicle-based air conditioning units....

  6. Can paternal leakage maintain sexually antagonistic polymorphism in the cytoplasm?

    OpenAIRE

    Kuijper, B; Lane, N.; POMIANKOWSKI, A.

    2015-01-01

    A growing number of studies in multicellular organisms highlight low or moderate frequencies of paternal transmission of cytoplasmic organelles, including both mitochondria and chloroplasts. It is well established that strict maternal inheritance is selectively blind to cytoplasmic elements that are deleterious to males - 'mother's curse'. But it is not known how sensitive this conclusion is to slight levels of paternal cytoplasmic leakage. We assess the scope for polymorphism when individual...

  7. Benchmark calculations for evaluation methods of gas volumetric leakage rate

    International Nuclear Information System (INIS)

    A containment function of radioactive materials transport casks is essential for safe transportation to prevent the radioactive materials from being released into environment. Regulations such as IAEA standard determined the limit of radioactivity to be released. Since is not practical for the leakage tests to measure directly the radioactivity release from a package, as gas volumetric leakages rates are proposed in ANSI N14.5 and ISO standards. In our previous works, gas volumetric leakage rates for several kinds of gas from various leaks were measured and two evaluation methods, 'a simple evaluation method' and 'a strict evaluation method', were proposed based on the results. The simple evaluation method considers the friction loss of laminar flow with expansion effect. The strict evaluating method considers an exit loss in addition to the friction loss. In this study, four worked examples were completed for on assumed large spent fuel transport cask (Type B Package) with wet or dry capacity and at three transport conditions; normal transport with intact fuels or failed fuels, and an accident in transport. The standard leakage rates and criteria for two kinds of leak test were calculated for each example by each evaluation method. The following observations are made based upon the calculations and evaluations: the choked flow model of ANSI method greatly overestimates the criteria for tests ; the laminar flow models of both ANSI and ISO methods slightly overestimate the criteria for tests; the above two results are within the design margin for ordinary transport condition and all methods are useful for the evaluation; for severe condition such as failed fuel transportation, it should pay attention to apply a choked flow model of ANSI method. (authors)

  8. Leakage performance of a novel turbomachinery shaft seal

    OpenAIRE

    Aksoy, Serdar; Akcan, Caner; Akşit, Mahmut Faruk; Aksit, Mahmut Faruk

    2009-01-01

    Advanced sealing systems are needed to control parasitic leakage flows to achieve high turbine engine efficiency and low emissions. Typical extreme turbomachinery engine operating conditions when combined rotor excursions do not lend simple sealing solutions. This work presents an in-depth analysis of a novel robust yet simple sealing system that is capable of maintaining long life under high speed and high temperature operating conditions. The proposed seal design is actually a gas bearing t...

  9. Robust Strategy for Intake Leakage Detection in Diesel Engines

    OpenAIRE

    Ceccarelli, Riccardo; Moulin, Philippe; Canudas De Wit, Carlos

    2009-01-01

    International audience Fault detection is motivated by the needs of guaranteeing high-performance engine behavior and regarding to the environmentally-based legislative regulations. An adaptive model based observer strategy is applied for the fault detection and estimation. The hole estimation relies on the model accuracy and sensors precision. In this paper is provided by a model-based upper bound for leakage error estimation for threshold design by the mean of the observer sensitivity st...

  10. Leakage currents in high-permittivity thin films

    OpenAIRE

    Schroeder, H; Schmitz, S.; Meuffels, P.

    2003-01-01

    Quite often leakage current data through high-permittivity thin films exhibit straight lines in the "Schottky" plot, i.e., log (current density j) versus sqrt (mean applied field), which suggests an electrode-limited current by field-enhanced thermionic emission. Unfortunately, the extracted permittivity at optical frequencies seldom is in agreement with experimental values and often is unacceptably small, i.e.,

  11. Surface Leakage Mechanisms in III-V Infrared Barrier Detectors

    Science.gov (United States)

    Sidor, D. E.; Savich, G. R.; Wicks, G. W.

    2016-09-01

    Infrared detector epitaxial structures employing unipolar barriers exhibit greatly reduced dark currents compared to simple pn-based structures. When correctly positioned within the structure, unipolar barriers are highly effective at blocking bulk dark current mechanisms. Unipolar barriers are also effective at suppressing surface leakage current in infrared detector structures employing absorbing layers that possess the same conductivity type in their bulk and at their surface. When an absorbing layer possesses opposite conductivity types in its bulk and at its surface, unipolar barriers are not solutions to surface leakage. This work reviews empirically determined surface band alignments of III-V semiconductor compounds and modeled surface band alignments of both gallium-free and gallium-containing type-II strained layer superlattice material systems. Surface band alignments are used to predict surface conductivity types in several detector structures, and the relationship between surface and bulk conductivity types in the absorbing layers of these structures is used as the basis for explaining observed surface leakage characteristics.

  12. Indoor-Outdoor Air Leakage of Apartments and Commercial Buildings

    Energy Technology Data Exchange (ETDEWEB)

    Price, P.N.; Shehabi, A.; Chan, R.W.; Gadgil, A.J.

    2006-06-01

    We compiled and analyzed available data concerning indoor-outdoor air leakage rates and building leakiness parameters for commercial buildings and apartments. We analyzed the data, and reviewed the related literature, to determine the current state of knowledge of the statistical distribution of air exchange rates and related parameters for California buildings, and to identify significant gaps in the current knowledge and data. Very few data were found from California buildings, so we compiled data from other states and some other countries. Even when data from other developed countries were included, data were sparse and few conclusive statements were possible. Little systematic variation in building leakage with construction type, building activity type, height, size, or location within the u.s. was observed. Commercial buildings and apartments seem to be about twice as leaky as single-family houses, per unit of building envelope area. Although further work collecting and analyzing leakage data might be useful, we suggest that a more important issue may be the transport of pollutants between units in apartments and mixed-use buildings, an under-studied phenomenon that may expose occupants to high levels of pollutants such as tobacco smoke or dry cleaning fumes.

  13. Air Leakage and Air Transfer Between Garage and Living Space

    Energy Technology Data Exchange (ETDEWEB)

    Rudd, Armin [Building Science Corporation, Westford, MA (United States)

    2014-09-01

    This research project focused on evaluation of air transfer between the garage and living space in a single-family detached home constructed by a production homebuilder in compliance with the 2009 International Residential Code and the 2009 International Energy Conservation Code. The project gathered important information about the performance of whole-building ventilation systems and garage ventilation systems as they relate to minimizing flow of contaminated air from garage to living space. A series of 25 multi-point fan pressurization tests and additional zone pressure diagnostic testing characterized the garage and house air leakage, the garage-to-house air leakage, and garage and house pressure relationships to each other and to outdoors using automated fan pressurization and pressure monitoring techniques. While the relative characteristics of this house may not represent the entire population of new construction configurations and air tightness levels (house and garage) throughout the country, the technical approach was conservative and should reasonably extend the usefulness of the results to a large spectrum of house configurations from this set of parametric tests in this one house. Based on the results of this testing, the two-step garage-to-house air leakage test protocol described above is recommended where whole-house exhaust ventilation is employed.

  14. Management of excluded segmental bile duct leakage following liver resection

    Science.gov (United States)

    Honoré, Charles; Vibert, Eric; Hoti, Emir; Azoulay, Daniel; Adam, René; Castaing, Denis

    2009-01-01

    Background: Postoperative bile leak secondary to a fistula is a known complication of hepatic surgery. Four different biliary fistula sub-types have been described: type A refers to minor leakage from the bile duct stump; type B to major leakage caused by insufficient closure of the bile duct stump; type C to major leakage caused by injury to the bile duct, and type D (the rarest) to the division and exclusion of a bile duct. This complication results from functional liver parenchyma in which bile drainage is excluded from the main duct. Methods: A retrospective review of the database for 163 patients diagnosed with post-hepatic surgery bile leak from April 1992 to June 2007 was performed. Results: Three patients were found to have type D biliary fistula, with durations of 3–21 months. The bile leak developed after a right hepatectomy in two patients and a right hepatectomy extending to segment IV in one patient. All three patients were rescheduled for surgical exploration, following failure of medical treatment. The procedure consisted of repeat resection of the independent liver parenchyma containing the fistula. One patient developed a postoperative leak from a hepaticojejunal anastomosis (treated conservatively) and the other two patients had an uneventful recovery. No recurrence of bile leak was encountered during their follow-up. Conclusions: Our experience indicates that conservative treatment is deceptive and not efficacious. For this condition, surgical intervention is the treatment of choice because it is very effective and is associated with a low morbidity. PMID:19718366

  15. Environmental and artificial tracers for investigating leakages into salt mines

    International Nuclear Information System (INIS)

    The paper presents the results of five years of experience in investigating the origin of waters in the Wapno mine, where salt is exploited in a Zechstein dome, in northwestern Poland. Tritium and 14C measurements showed young infiltration waters in leakages at the third level of the mine. Stable isotope determinations showed a considerable shift of values from the precipitation line, both on activity and on concentration scales. Despite this shift, it was possible to distinguish infiltration waters from connate ones appearing at deeper mine levels. In 1976 and 1977 leakage flow-rates increased and the mineralization decreased. Tritium and 14C contents did not then change, showing that, at the initial stages of flooding, the origin of water in the leakages was not changed. The first results of isotope investigations in the Klodawa mine, situated in another Zechstein salt dome in central Poland, showed connate waters. Observations performed in the Wieliczka salt mine, situated in Miocene formations in southern Poland, showed old waters originating from the surrounding formations. Their stable isotope composition shows that recharge took place in a cooler climate. The 14C content of these waters is 1 to 2% of recent carbon. The experimental procedure used to determine the isotopic composition of highly mineralized brines is also described. (author)

  16. Errors in macromolecular synthesis after stress : a study of the possible protective role of the small heat shock proteins

    OpenAIRE

    Marin Vinader, L.

    2006-01-01

    The general goal of this thesis was to gain insight in what small heat shock proteins (sHsps) do with respect to macromolecular synthesis during a stressful situation in the cell. It is known that after a non-lethal heat shock, cells are better protected against a subsequent more severe heat shock, a phenomenon known as thermotolerance and attributed to the presence of the heat shock proteins. The question we asked first is whether the error rate in macromolecular synthesis (transcription, RN...

  17. MX1: a bending-magnet crystallography beamline serving both chemical and macromolecular crystallography communities at the Australian Synchrotron

    International Nuclear Information System (INIS)

    The macromolecular crystallography beamline MX1 at the Australian Synchrotron is described. MX1 is a bending-magnet crystallography beamline at the 3 GeV Australian Synchrotron. The beamline delivers hard X-rays in the energy range from 8 to 18 keV to a focal spot at the sample position of 120 µm FWHM. The beamline endstation and ancillary equipment facilitate local and remote access for both chemical and biological macromolecular crystallography. Here, the design of the beamline and endstation are discussed. The beamline has enjoyed a full user program for the last seven years and scientific highlights from the user program are also presented

  18. Sodium leakage experience at the prototype FBR Monju

    International Nuclear Information System (INIS)

    Monju is Japan's prototype fast breeder reactor: 280 MWe (714 MWt), fueled with mixed oxides of plutonium and uranium, cooled by liquid sodium. Construction was started in 1985 and initial criticality was attained in April 1994. On 8th December 1995, sodium leakage from a secondary circuit occurred in a piping room of the reactor auxiliary building. The secondary sodium leaked through a temperature sensor, due to the breakaway of the tip of the thermocouple well tube installed near the secondary circuit outlet of the intermediate heat exchanger (IHX). The reactor remained cooled and thus, from the viewpoint of radiological hazards, the safety of the reactor was secured. There was no release of radioactive material. There were no adverse effects for personnel and the surrounding environment. The thermocouple well tube failure resulted from high cycle fatigue due to flow induced vibration. It was found that this flow induced vibration was not caused by well-known Von Karman vortex shedding, but a symmetric vortex shedding. The design of the thermocouple well, which was subject to avoid this phenomenon, was reviewed. A new design guide against the flow-induced vibration was prepared by JNC (Japan Nuclear Cycle Development Institute). This is more comprehensive and definitive than the existing guide 'ASME N-1300' (Flow-induced vibration of tube and tube banks). New thermocouple well designs were proposed consistent with this design guide. To prevent a recurrence of the secondary sodium leakage incident, comprehensive design review activities were started for the purpose of checking the safety and reliability of the plant. As a result, several aspects to be improved were identified and improvements and countermeasures have been studied. The main improvements and countermeasures are as follows: To enable the operators to understand and react to incidents quickly, new sodium leakage detectors (TV monitors, smoke sensors) and a new surveillance system will be installed; To

  19. Polarizable Atomic Multipole X-Ray Refinement: Particle Mesh Ewald Electrostatics for Macromolecular Crystals.

    Science.gov (United States)

    Schnieders, Michael J; Fenn, Timothy D; Pande, Vijay S

    2011-04-12

    Refinement of macromolecular models from X-ray crystallography experiments benefits from prior chemical knowledge at all resolutions. As the quality of the prior chemical knowledge from quantum or classical molecular physics improves, in principle so will resulting structural models. Due to limitations in computer performance and electrostatic algorithms, commonly used macromolecules X-ray crystallography refinement protocols have had limited support for rigorous molecular physics in the past. For example, electrostatics is often neglected in favor of nonbonded interactions based on a purely repulsive van der Waals potential. In this work we present advanced algorithms for desktop workstations that open the door to X-ray refinement of even the most challenging macromolecular data sets using state-of-the-art classical molecular physics. First we describe theory for particle mesh Ewald (PME) summation that consistently handles the symmetry of all 230 space groups, replicates of the unit cell such that the minimum image convention can be used with a real space cutoff of any size and the combination of space group symmetry with replicates. An implementation of symmetry accelerated PME for the polarizable atomic multipole optimized energetics for biomolecular applications (AMOEBA) force field is presented. Relative to a single CPU core performing calculations on a P1 unit cell, our AMOEBA engine called Force Field X (FFX) accelerates energy evaluations by more than a factor of 24 on an 8-core workstation with a Tesla GPU coprocessor for 30 structures that contain 240 000 atoms on average in the unit cell. The benefit of AMOEBA electrostatics evaluated with PME for macromolecular X-ray crystallography refinement is demonstrated via rerefinement of 10 crystallographic data sets that range in resolution from 1.7 to 4.5 Å. Beginning from structures obtained by local optimization without electrostatics, further optimization using AMOEBA with PME electrostatics improved

  20. Effect of STI-induced mechanical stress on leakage current in deep submicron CMOS devices

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The shallow trench isolation (STI) induced mechanical stress significantly affects the CMOS device off-state leakage behaviour. In this paper, we designed two types of devices to investigate this effect, and all leakage components,including sub-threshold leakage (Isub), gate-induced-drain-leakage (IGIDL), gate edge-direct-tunnelling leakage (IEDT) and band-to-band-tunnelling leakage (IBTBT) were analysed. For NMOS, Isub can be reduced due to the mechanical stress induced higher boron concentration in well region. However, the GIDL component increases simultaneously as a result of the high well concentration induced drain-to-well depletion layer narrowing as well as the shrinkage of the energy gap. For PMOS, the only mechanical stress effect on leakage current is the energy gap narrowing induced GIDL increase.

  1. Monetizing Leakage Risk of Geologic CO2 Storage using Wellbore Permeability Frequency Distributions

    Science.gov (United States)

    Bielicki, Jeffrey; Fitts, Jeffrey; Peters, Catherine; Wilson, Elizabeth

    2013-04-01

    Carbon dioxide (CO2) may be captured from large point sources (e.g., coal-fired power plants, oil refineries, cement manufacturers) and injected into deep sedimentary basins for storage, or sequestration, from the atmosphere. This technology—CO2 Capture and Storage (CCS)—may be a significant component of the portfolio of technologies deployed to mitigate climate change. But injected CO2, or the brine it displaces, may leak from the storage reservoir through a variety of natural and manmade pathways, including existing wells and wellbores. Such leakage will incur costs to a variety of stakeholders, which may affect the desirability of potential CO2 injection locations as well as the feasibility of the CCS approach writ large. Consequently, analyzing and monetizing leakage risk is necessary to develop CCS as a viable technological option to mitigate climate change. Risk is the product of the probability of an outcome and the impact of that outcome. Assessment of leakage risk from geologic CO2 storage reservoirs requires an analysis of the probabilities and magnitudes of leakage, identification of the outcomes that may result from leakage, and an assessment of the expected economic costs of those outcomes. One critical uncertainty regarding the rate and magnitude of leakage is determined by the leakiness of the well leakage pathway. This leakiness is characterized by a leakage permeability for the pathway, and recent work has sought to determine frequency distributions for the leakage permeabilities of wells and wellbores. We conduct a probabilistic analysis of leakage and monetized leakage risk for CO2 injection locations in the Michigan Sedimentary Basin (USA) using empirically derived frequency distributions for wellbore leakage permeabilities. To conduct this probabilistic risk analysis, we apply the RISCS (Risk Interference of Subsurface CO2 Storage) model (Bielicki et al, 2013a, 2012b) to injection into the Mt. Simon Sandstone. RISCS monetizes leakage risk

  2. Localized reconstruction of subunits from electron cryomicroscopy images of macromolecular complexes.

    Science.gov (United States)

    Ilca, Serban L; Kotecha, Abhay; Sun, Xiaoyu; Poranen, Minna M; Stuart, David I; Huiskonen, Juha T

    2015-01-01

    Electron cryomicroscopy can yield near-atomic resolution structures of highly ordered macromolecular complexes. Often however some subunits bind in a flexible manner, have different symmetry from the rest of the complex, or are present in sub-stoichiometric amounts, limiting the attainable resolution. Here we report a general method for the localized three-dimensional reconstruction of such subunits. After determining the particle orientations, local areas corresponding to the subunits can be extracted and treated as single particles. We demonstrate the method using three examples including a flexible assembly and complexes harbouring subunits with either partial occupancy or mismatched symmetry. Most notably, the method allows accurate fitting of the monomeric RNA-dependent RNA polymerase bound at the threefold axis of symmetry inside a viral capsid, revealing for the first time its exact orientation and interactions with the capsid proteins. Localized reconstruction is expected to provide novel biological insights in a range of challenging biological systems. PMID:26534841

  3. Parallel macromolecular delivery and biochemical/electrochemical interface to cells employing nanostructures

    Energy Technology Data Exchange (ETDEWEB)

    McKnight, Timothy E; Melechko, Anatoli V; Griffin, Guy D; Guillorn, Michael A; Merkulov, Vladimir L; Simpson, Michael L

    2015-03-31

    Systems and methods are described for parallel macromolecular delivery and biochemical/electrochemical interface to whole cells employing carbon nanostructures including nanofibers and nanotubes. A method includes providing a first material on at least a first portion of a first surface of a first tip of a first elongated carbon nanostructure; providing a second material on at least a second portion of a second surface of a second tip of a second elongated carbon nanostructure, the second elongated carbon nanostructure coupled to, and substantially parallel to, the first elongated carbon nanostructure; and penetrating a boundary of a biological sample with at least one member selected from the group consisting of the first tip and the second tip.

  4. Phase transitions of macromolecular microsphere composite hydrogels based on the stochastic Cahn–Hilliard equation

    International Nuclear Information System (INIS)

    We use the stochastic Cahn–Hilliard equation to simulate the phase transitions of the macromolecular microsphere composite (MMC) hydrogels under a random disturbance. Based on the Flory–Huggins lattice model and the Boltzmann entropy theorem, we develop a reticular free energy suit for the network structure of MMC hydrogels. Taking the random factor into account, with the time-dependent Ginzburg-Landau (TDGL) mesoscopic simulation method, we set up a stochastic Cahn–Hilliard equation, designated herein as the MMC-TDGL equation. The stochastic term in the equation is constructed appropriately to satisfy the fluctuation-dissipation theorem and is discretized on a spatial grid for the simulation. A semi-implicit difference scheme is adopted to numerically solve the MMC-TDGL equation. Some numerical experiments are performed with different parameters. The results are consistent with the physical phenomenon, which verifies the good simulation of the stochastic term

  5. Modulation of phosphofructokinase action by macromolecular interactions. Quantitative analysis of the phosphofructokinase-aldolase-calmodulin system.

    Science.gov (United States)

    Orosz, F; Christova, T Y; Ovádi, J

    1988-11-23

    The simultaneous effect of calmodulin and aldolase (D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase, EC 4.1.2.13) on the concentration-dependent behaviour of muscle phosphofructokinase (ATP: D-fructose-6-phosphate 1-phosphotransferase, EC 2.7.1.11) has been analysed by means of a covalently attached fluorescent probe, gel penetration experiments, and using a kinetic approach. We found that calmodulin-induced inactivation of phosphofructokinase is suspended by addition of an equimolar amount of aldolase. This effect was attributed to an apparent competition of calmodulin and aldolase for the dimeric forms of kinase. Moreover, the direct binding of aldolase to calmodulin has also been demonstrated, which resulted in a significant decrease in the kcat value of the enzyme. The quantitative analysis of these interactions in the system phosphofructokinase-calmodulin-aldolase is presented. A possible molecular model for the modulation of phosphofructokinase action by macromolecular interactions is envisaged. PMID:2973356

  6. Computational Methodologies for Real-Space Structural Refinement of Large Macromolecular Complexes.

    Science.gov (United States)

    Goh, Boon Chong; Hadden, Jodi A; Bernardi, Rafael C; Singharoy, Abhishek; McGreevy, Ryan; Rudack, Till; Cassidy, C Keith; Schulten, Klaus

    2016-07-01

    The rise of the computer as a powerful tool for model building and refinement has revolutionized the field of structure determination for large biomolecular systems. Despite the wide availability of robust experimental methods capable of resolving structural details across a range of spatiotemporal resolutions, computational hybrid methods have the unique ability to integrate the diverse data from multimodal techniques such as X-ray crystallography and electron microscopy into consistent, fully atomistic structures. Here, commonly employed strategies for computational real-space structural refinement are reviewed, and their specific applications are illustrated for several large macromolecular complexes: ribosome, virus capsids, chemosensory array, and photosynthetic chromatophore. The increasingly important role of computational methods in large-scale structural refinement, along with current and future challenges, is discussed. PMID:27145875

  7. OCTOPUS: an innovative multimodal diffractometer for neutron macromolecular crystallography across the length scales

    International Nuclear Information System (INIS)

    We propose to construct a novel protein diffractometer at position H112B. The new instrument will deliver major efficiency gains, as well as offering greatly extended flexibility through the option of several easily interchangeable modes of operation. This proposal builds on the demonstrable need to extend ILL's capacity for high resolution structural studies of protein systems, as well as a need to widen the scope of biological crystallography - in particular for monochromatic studies at both high and low resolution. The development will be carried out in close collaboration with structural biologists at the ESRF, and engineered in such a way that the user interface of the instrument (from sample to software) will be transparently identifiable to a large, dynamic, and driven community of European synchrotron X-ray macromolecular crystallographers. (authors)

  8. Recent Major Improvements to the ALS Sector 5 Macromolecular Crystallography Beamlines

    International Nuclear Information System (INIS)

    Although the Advanced Light Source (ALS) was initially conceived primarily as a low energy (1.9GeV) 3rd generation source of VUV and soft x-ray radiation it was realized very early in the development of the facility that a multipole wiggler source coupled with high quality, (brightness preserving), optics would result in a beamline whose performance across the optimal energy range (5-15keV) for macromolecular crystallography (MX) would be comparable to, or even exceed, that of many existing crystallography beamlines at higher energy facilities. Hence, starting in 1996, a suite of three beamlines, branching off a single wiggler source, was constructed, which together formed the ALS Macromolecular Crystallography Facility. From the outset this facility was designed to cater equally to the needs of both academic and industrial users with a heavy emphasis placed on the development and introduction of high throughput crystallographic tools, techniques, and facilities--such as large area CCD detectors, robotic sample handling and automounting facilities, a service crystallography program, and a tightly integrated, centralized, and highly automated beamline control environment for users. This facility was immediately successful, with the primary Multiwavelength Anomalous Diffraction beamline (5.0.2) in particular rapidly becoming one of the foremost crystallographic facilities in the US--responsible for structures such as the 70S ribosome. This success in-turn triggered enormous growth of the ALS macromolecular crystallography community and spurred the development of five additional ALS MX beamlines all utilizing the newly developed superconducting bending magnets ('superbends') as sources. However in the years since the original Sector 5.0 beamlines were built the performance demands of macromolecular crystallography users have become ever more exacting; with growing emphasis placed on studying larger complexes, more difficult structures, weakly diffracting or smaller

  9. Phenix - a comprehensive python-based system for macromolecular structure solution

    Energy Technology Data Exchange (ETDEWEB)

    Terwilliger, Thomas C [Los Alamos National Laboratory; Hung, Li - Wei [Los Alamos National Laboratory; Adams, Paul D [UC BERKELEY; Afonine, Pavel V [UC BERKELEY; Bunkoczi, Gabor [UNIV OF CAMBRIDGE; Chen, Vincent B [DUKE UNIV; Davis, Ian [DUKE UNIV; Echols, Nathaniel [LBNL; Headd, Jeffrey J [DUKE UNIV; Grosse Kunstleve, Ralf W [LBNL; Mccoy, Airlie J [UNIV OF CAMBRIDGE; Moriarty, Nigel W [LBNL; Oeffner, Robert [UNIV OF CAMBRIDGE; Read, Randy J [UNIV OF CAMBRIDGE; Richardson, David C [DUKE UNIV; Richardson, Jane S [DUKE UNIV; Zwarta, Peter H [LBNL

    2009-01-01

    Macromolecular X-ray crystallography is routinely applied to understand biological processes at a molecular level. However, significant time and effort are still required to solve and complete many of these structures because of the need for manual interpretation of complex numerical data using many software packages, and the repeated use of interactive three-dimensional graphics. Phenix has been developed to provide a comprehensive system for crystallographic structure solution with an emphasis on automation of all procedures. This has relied on the development of algorithms that minimize or eliminate subjective input, the development of algorithms that automate procedures that are traditionally performed by hand, and finally the development of a framework that allows a tight integration between the algorithms.

  10. Integration and global analysis of isothermal titration calorimetry data for studying macromolecular interactions.

    Science.gov (United States)

    Brautigam, Chad A; Zhao, Huaying; Vargas, Carolyn; Keller, Sandro; Schuck, Peter

    2016-05-01

    Isothermal titration calorimetry (ITC) is a powerful and widely used method to measure the energetics of macromolecular interactions by recording a thermogram of differential heating power during a titration. However, traditional ITC analysis is limited by stochastic thermogram noise and by the limited information content of a single titration experiment. Here we present a protocol for bias-free thermogram integration based on automated shape analysis of the injection peaks, followed by combination of isotherms from different calorimetric titration experiments into a global analysis, statistical analysis of binding parameters and graphical presentation of the results. This is performed using the integrated public-domain software packages NITPIC, SEDPHAT and GUSSI. The recently developed low-noise thermogram integration approach and global analysis allow for more precise parameter estimates and more reliable quantification of multisite and multicomponent cooperative and competitive interactions. Titration experiments typically take 1-2.5 h each, and global analysis usually takes 10-20 min. PMID:27055097

  11. Phase transitions of macromolecular microsphere composite hydrogels based on the stochastic Cahn–Hilliard equation

    Energy Technology Data Exchange (ETDEWEB)

    Li, Xiao, E-mail: lixiao1228@163.com; Ji, Guanghua, E-mail: ghji@bnu.edu.cn; Zhang, Hui, E-mail: hzhang@bnu.edu.cn

    2015-02-15

    We use the stochastic Cahn–Hilliard equation to simulate the phase transitions of the macromolecular microsphere composite (MMC) hydrogels under a random disturbance. Based on the Flory–Huggins lattice model and the Boltzmann entropy theorem, we develop a reticular free energy suit for the network structure of MMC hydrogels. Taking the random factor into account, with the time-dependent Ginzburg-Landau (TDGL) mesoscopic simulation method, we set up a stochastic Cahn–Hilliard equation, designated herein as the MMC-TDGL equation. The stochastic term in the equation is constructed appropriately to satisfy the fluctuation-dissipation theorem and is discretized on a spatial grid for the simulation. A semi-implicit difference scheme is adopted to numerically solve the MMC-TDGL equation. Some numerical experiments are performed with different parameters. The results are consistent with the physical phenomenon, which verifies the good simulation of the stochastic term.

  12. Local analysis of strains and rotations for macromolecular electron microscopy maps.

    Science.gov (United States)

    Sorzano, C O S; Martín-Ramos, A; Prieto, F; Melero, R; Martín-Benito, J; Jonic, S; Navas-Calvente, J; Vargas, J; Otón, J; Abrishami, V; de la Rosa-Trevín, J M; Gómez-Blanco, J; Vilas, J L; Marabini, R; Carazo, J M

    2016-07-01

    Macromolecular complexes perform their physiological functions by local rearrangements of their constituents and biochemically interacting with their reaction partners. These rearrangements may involve local rotations and the induction of local strains causing different mechanical efforts and stretches at the different areas of the protein. The analysis of these local deformations may reveal important insight into the way proteins perform their tasks. In this paper we introduce a method to perform this kind of local analysis using Electron Microscopy volumes in a fully objective and automatic manner. For doing so, we exploit the continuous nature of the result of an elastic image registration using B-splines as its basis functions. We show that the results obtained by the new automatic method are consistent with previous observations on these macromolecules. PMID:27102900

  13. Probing a continuum of macro-molecular assembly models with graph templates of complexes.

    Science.gov (United States)

    Dreyfus, Tom; Doye, Valérie; Cazals, Frédéric

    2013-11-01

    Reconstruction by data integration is an emerging trend to reconstruct large protein assemblies, but uncertainties on the input data yield average models whose quantitative interpretation is challenging. This article presents methods to probe fuzzy models of large assemblies against atomic resolution models of subsystems. Consider a toleranced model (TOM) of a macromolecular assembly, namely a continuum of nested shapes representing the assembly at multiple scales. Also consider a template namely an atomic resolution 3D model of a subsystem (a complex) of this assembly. We present graph-based algorithms performing a multi-scale assessment of the complexes of the TOM, by comparing the pairwise contacts which appear in the TOM against those of the template. We apply this machinery on TOM derived from an average model of the nuclear pore complex, to explore the connections among members of its well-characterized Y-complex. PMID:23609891

  14. Site-selective electroless nickel plating on patterned thin films of macromolecular metal complexes.

    Science.gov (United States)

    Kimura, Mutsumi; Yamagiwa, Hiroki; Asakawa, Daisuke; Noguchi, Makoto; Kurashina, Tadashi; Fukawa, Tadashi; Shirai, Hirofusa

    2010-12-01

    We demonstrate a simple route to depositing nickel layer patterns using photocross-linked polymer thin films containing palladium catalysts, which can be used as adhesive interlayers for fabrication of nickel patterns on glass and plastic substrates. Electroless nickel patterns can be obtained in three steps: (i) the pattern formation of partially quaterized poly(vinyl pyridine) by UV irradiation, (ii) the formation of macromolecular metal complex with palladium, and (iii) the nickel metallization using electroless plating bath. Metallization is site-selective and allows for a high resolution. And the resulting nickel layered structure shows good adhesion with glass and plastic substrates. The direct patterning of metallic layers onto insulating substrates indicates a great potential for fabricating micro/nano devices. PMID:21069972

  15. The structural organization and luminescence properties of macromolecular metal complexes containing terbium ions

    International Nuclear Information System (INIS)

    Determination of aminobenzoic acid (ABA)-groups effect on luminescence of Tb3+ ions in aqueous solutions of ABA-containing copolymers, as well as investigation into connection of Tb3+ luminescence with peculiarities of ABA structure, content of ABA in copolymer, structure of copolymer, and with conditions of formation and structure of metal complexes are the task of the research. Copolymers of N-alkylmethacrylamides with various isomers of N-methacryloylaminobenzoic acids were synthesized and used to obtain the macromolecular metal complexes (MMC) with Tb3+ ions in aqueous solutions. The luminescence spectra of Tb3+ ions in these systems were measured. The composition and stability of MMC are established. Polymer-competitor (polyacrylic and polymethacrylic acids) were used for determination of stability of Tb3+ ion-copolymer bond. The effect of Tb3+ ions on the structural organization of macromolecules is characterized by the relaxation times determined using the method of polarized luminescence

  16. Polymer segregation under confinement: Influences of macromolecular crowding and the interaction between the polymer and crowders

    Science.gov (United States)

    Chen, Yuhao; Yu, Wancheng; Wang, Jiajun; Luo, Kaifu

    2015-10-01

    Entropy driven polymer segregation in confinements as a model for chromosome separation in bacteria has attracted wide attention; however, the effects of macromolecular crowding and the interaction between the binding protein and the newly replicated DNA on the segregation dynamics are not clear. Using Langevin dynamics simulations, we investigate the influences of crowders and the attractive interaction between the polymer and a small number of crowders on segregation of two overlapping polymers under a cylindrical confinement. We find that the segregation time increases with increasing the volume fraction of crowders due to the slower chain diffusion in crowded environments. For a fixed volume fraction of crowders, the segregation time decreases with increasing the size of crowders. Moreover, the attractive interaction between the polymer and a small number of crowders can significantly facilitate the chain segregation. These results are important for understanding the chromosome segregation in living cells.

  17. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

    Directory of Open Access Journals (Sweden)

    Sadhna Phanse

    2016-03-01

    Full Text Available Our analysis examines the conservation of multiprotein complexes among metazoa through use of high resolution biochemical fractionation and precision mass spectrometry applied to soluble cell extracts from 5 representative model organisms Caenorhabditis elegans, Drosophila melanogaster, Mus musculus, Strongylocentrotus purpuratus, and Homo sapiens. The interaction network obtained from the data was validated globally in 4 distant species (Xenopus laevis, Nematostella vectensis, Dictyostelium discoideum, Saccharomyces cerevisiae and locally by targeted affinity-purification experiments. Here we provide details of our massive set of supporting biochemical fractionation data available via ProteomeXchange (PXD002319-PXD002328, PPIs via BioGRID (185267; and interaction network projections via (http://metazoa.med.utoronto.ca made fully accessible to allow further exploration. The datasets here are related to the research article on metazoan macromolecular complexes in Nature [1].

  18. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes.

    Science.gov (United States)

    Phanse, Sadhna; Wan, Cuihong; Borgeson, Blake; Tu, Fan; Drew, Kevin; Clark, Greg; Xiong, Xuejian; Kagan, Olga; Kwan, Julian; Bezginov, Alexandr; Chessman, Kyle; Pal, Swati; Cromar, Graham; Papoulas, Ophelia; Ni, Zuyao; Boutz, Daniel R; Stoilova, Snejana; Havugimana, Pierre C; Guo, Xinghua; Malty, Ramy H; Sarov, Mihail; Greenblatt, Jack; Babu, Mohan; Derry, W Brent; Tillier, Elisabeth R; Wallingford, John B; Parkinson, John; Marcotte, Edward M; Emili, Andrew

    2016-03-01

    Our analysis examines the conservation of multiprotein complexes among metazoa through use of high resolution biochemical fractionation and precision mass spectrometry applied to soluble cell extracts from 5 representative model organisms Caenorhabditis elegans, Drosophila melanogaster, Mus musculus, Strongylocentrotus purpuratus, and Homo sapiens. The interaction network obtained from the data was validated globally in 4 distant species (Xenopus laevis, Nematostella vectensis, Dictyostelium discoideum, Saccharomyces cerevisiae) and locally by targeted affinity-purification experiments. Here we provide details of our massive set of supporting biochemical fractionation data available via ProteomeXchange (PXD002319-PXD002328), PPIs via BioGRID (185267); and interaction network projections via (http://metazoa.med.utoronto.ca) made fully accessible to allow further exploration. The datasets here are related to the research article on metazoan macromolecular complexes in Nature [1]. PMID:26870755

  19. Macromolecular crowding creates heterogeneous environments of gene expression in picolitre droplets

    Science.gov (United States)

    Hansen, Maike M. K.; Meijer, Lenny H. H.; Spruijt, Evan; Maas, Roel J. M.; Rosquelles, Marta Ventosa; Groen, Joost; Heus, Hans A.; Huck, Wilhelm T. S.

    2016-02-01

    Understanding the dynamics of complex enzymatic reactions in highly crowded small volumes is crucial for the development of synthetic minimal cells. Compartmentalized biochemical reactions in cell-sized containers exhibit a degree of randomness due to the small number of molecules involved. However, it is unknown how the physical environment contributes to the stochastic nature of multistep enzymatic processes. Here, we present a robust method to quantify gene expression noise in vitro using droplet microfluidics. We study the changes in stochasticity in the cell-free gene expression of two genes compartmentalized within droplets as a function of DNA copy number and macromolecular crowding. We find that decreased diffusion caused by a crowded environment leads to the spontaneous formation of heterogeneous microenvironments of mRNA as local production rates exceed the diffusion rates of macromolecules. This heterogeneity leads to a higher probability of the molecular machinery staying in the same microenvironment, directly increasing the system's stochasticity.

  20. A mixed method for measuring low-frequency acoustic properties of macromolecular materials

    Institute of Scientific and Technical Information of China (English)

    LIU; Hongwei; YAO; Lei; ZHAO; Hong; ZHANG; Jichuan; XUE; Zhaohong

    2006-01-01

    A mixed method for measuring low-frequency acoustic properties of macromolecular materials is presented.The dynamic mechanical parameters of materials are first measured by using Dynamic Mechanical Thermal Apparatus(DMTA) at low frequencies,usually less than 100 Hz; then based on the Principles of Time-Temperature Super position (TTS),these parameters are extended to the frequency range that acousticians are concerned about,usually from hundreds to thousands of hertz; finally the extended dynamic mechanical parameters are transformed into acoustic parameters with the help of acoustic measurement and inverse analysis.To test the feasibility and accuracy,we measure a kind of rubber sample in DMTA and acquire the basic acoustic parameters of the sample by using this method.While applying the basic parameters to calculating characteristics of the sample in acoustic pipe,a reasonable agreement of sound absorption coefficients is obtained between the calculations and measurements in the acoustic pipe.

  1. A specificity switch in selected cre recombinase variants is mediated by macromolecular plasticity and water.

    Science.gov (United States)

    Baldwin, Enoch P; Martin, Shelley S; Abel, Jonas; Gelato, Kathy A; Kim, Hanseong; Schultz, Peter G; Santoro, Stephen W

    2003-11-01

    The basis for the altered DNA specificities of two Cre recombinase variants, obtained by mutation and selection, was revealed by their cocrystal structures. The proteins share similar substitutions but differ in their preferences for the natural LoxP substrate and an engineered substrate that is inactive with wild-type Cre, LoxM7. One variant preferentially recombines LoxM7 and contacts the substituted bases through a hydrated network of novel interlocking protein-DNA contacts. The other variant recognizes both LoxP and LoxM7 utilizing the same DNA backbone contact but different base contacts, facilitated by an unexpected DNA shift. Assisted by water, novel interaction networks can arise from few protein substitutions, suggesting how new DNA binding specificities might evolve. The contributions of macromolecular plasticity and water networks in specific DNA recognition observed here present a challenge for predictive schemes. PMID:14652076

  2. Errors in macromolecular synthesis after stress : a study of the possible protective role of the small heat shock proteins

    NARCIS (Netherlands)

    Marin Vinader, L.

    2006-01-01

    The general goal of this thesis was to gain insight in what small heat shock proteins (sHsps) do with respect to macromolecular synthesis during a stressful situation in the cell. It is known that after a non-lethal heat shock, cells are better protected against a subsequent more severe heat shock,

  3. Proceedings of a one-week course on exploiting anomalous scattering in macromolecular structure determination (EMBO'07)

    International Nuclear Information System (INIS)

    This course, which was directed to young scientists, illustrated both theoretical and practical aspects of macromolecular crystal structure solution using synchrotron radiation. Some software dedicated to data collection, processing and analysis were presented. This document gathers only the slides of the presentations

  4. Proceedings of a one-week course on exploiting anomalous scattering in macromolecular structure determination (EMBO'07)

    Energy Technology Data Exchange (ETDEWEB)

    Weiss, M.S.; Shepard, W.; Dauter, Z.; Leslie, A.; Diederichs, K.; Evans, G.; Svensson, O.; Schneider, T.; Bricogne, G.; Dauter, Z.; Flensburg, C.; Terwilliger, T.; Lamzin, V.; Leslie, A.; Kabsch, W.; Flensburg, C.; Terwilliger, T.; Lamzin, V.; Read, R.; Panjikar, S.; Pannu, N.S.; Dauter, Z.; Weiss, M.S.; McSweeney, S

    2007-07-01

    This course, which was directed to young scientists, illustrated both theoretical and practical aspects of macromolecular crystal structure solution using synchrotron radiation. Some software dedicated to data collection, processing and analysis were presented. This document gathers only the slides of the presentations.

  5. Macromolecular crowding meets oxygen tension in human mesenchymal stem cell culture - A step closer to physiologically relevant in vitro organogenesis

    Science.gov (United States)

    Cigognini, Daniela; Gaspar, Diana; Kumar, Pramod; Satyam, Abhigyan; Alagesan, Senthilkumar; Sanz-Nogués, Clara; Griffin, Matthew; O’Brien, Timothy; Pandit, Abhay; Zeugolis, Dimitrios I.

    2016-08-01

    Modular tissue engineering is based on the cells’ innate ability to create bottom-up supramolecular assemblies with efficiency and efficacy still unmatched by man-made devices. Although the regenerative potential of such tissue substitutes has been documented in preclinical and clinical setting, the prolonged culture time required to develop an implantable device is associated with phenotypic drift and/or cell senescence. Herein, we demonstrate that macromolecular crowding significantly enhances extracellular matrix deposition in human bone marrow mesenchymal stem cell culture at both 20% and 2% oxygen tension. Although hypoxia inducible factor - 1α was activated at 2% oxygen tension, increased extracellular matrix synthesis was not observed. The expression of surface markers and transcription factors was not affected as a function of oxygen tension and macromolecular crowding. The multilineage potential was also maintained, albeit adipogenic differentiation was significantly reduced in low oxygen tension cultures, chondrogenic differentiation was significantly increased in macromolecularly crowded cultures and osteogenic differentiation was not affected as a function of oxygen tension and macromolecular crowding. Collectively, these data pave the way for the development of bottom-up tissue equivalents based on physiologically relevant developmental processes.

  6. Development of an online UV–visible microspectrophotometer for a macromolecular crystallography beamline

    International Nuclear Information System (INIS)

    An online UV–visible microspectrophotometer has been developed for the macromolecular crystallography beamline at SPring-8. Details of this spectrophotometer are reported. Measurement of the UV–visible absorption spectrum is a convenient technique for detecting chemical changes of proteins, and it is therefore useful to combine spectroscopy and diffraction studies. An online microspectrophotometer for the UV–visible region was developed and installed on the macromolecular crystallography beamline, BL38B1, at SPring-8. This spectrophotometer is equipped with a difference dispersive double monochromator, a mercury–xenon lamp as the light source, and a photomultiplier as the detector. The optical path is mostly constructed using mirrors, in order to obtain high brightness in the UV region, and the confocal optics are assembled using a cross-slit diaphragm like an iris to eliminate stray light. This system can measure optical densities up to a maximum of 4.0. To study the effect of radiation damage, preliminary measurements of glucose isomerase and thaumatin crystals were conducted in the UV region. Spectral changes dependent on X-ray dose were observed at around 280 nm, suggesting that structural changes involving Trp or Tyr residues occurred in the protein crystal. In the case of the thaumatin crystal, a broad peak around 400 nm was also generated after X-ray irradiation, suggesting the cleavage of a disulfide bond. Dose-dependent spectral changes were also observed in cryo-solutions alone, and these changes differed with the composition of the cryo-solution. These responses in the UV region are informative regarding the state of the sample; consequently, this device might be useful for X-ray crystallography

  7. PURY: a database of geometric restraints of hetero compounds for refinement in complexes with macromolecular structures.

    Science.gov (United States)

    Andrejasic, Miha; Praaenikar, Jure; Turk, Dusan

    2008-11-01

    The number and variety of macromolecular structures in complex with ;hetero' ligands is growing. The need for rapid delivery of correct geometric parameters for their refinement, which is often crucial for understanding the biological relevance of the structure, is growing correspondingly. The current standard for describing protein structures is the Engh-Huber parameter set. It is an expert data set resulting from selection and analysis of the crystal structures gathered in the Cambridge Structural Database (CSD). Clearly, such a manual approach cannot be applied to the vast and ever-growing number of chemical compounds. Therefore, a database, named PURY, of geometric parameters of chemical compounds has been developed, together with a server that accesses it. PURY is a compilation of the whole CSD. It contains lists of atom classes and bonds connecting them, as well as angle, chirality, planarity and conformation parameters. The current compilation is based on CSD 5.28 and contains 1978 atom classes and 32,702 bonding, 237,068 angle, 201,860 dihedral and 64,193 improper geometric restraints. Analysis has confirmed that the restraints from the PURY database are suitable for use in macromolecular crystal structure refinement and should be of value to the crystallographic community. The database can be accessed through the web server http://pury.ijs.si/, which creates topology and parameter files from deposited coordinates in suitable forms for the refinement programs MAIN, CNS and REFMAC. In the near future, the server will move to the CSD website http://pury.ccdc.cam.ac.uk/. PMID:19020347

  8. Simulations of hydraulic fracturing and leakage in sedimentary basins

    Energy Technology Data Exchange (ETDEWEB)

    Lothe, Ane Elisabeth

    2004-01-01

    Hydraulic fracturing and leakage of water through the caprock is described from sedimentary basin over geological time scale. Abnormal pressure accumulations reduce the effective stresses in the underground and trigger the initiation of hydraulic fractures. The major faults in the basin define these pressure compartments. In this Thesis, basin simulations of hydraulic fracturing and leakage have been carried out. A simulator (Pressim) is used to calculate pressure generation and dissipitation between the compartments. The flux between the compartments and not the flow within the compartments is modelled. The Griffith-Coulomb failure criterion determines initial failure at the top structures of overpressured compartments, whereas the frictional sliding criterion is used for reactivation along the same fractures. The minimum horizontal stress is determined from different formulas, and an empirical one seems to give good results compared to measured pressures and minimum horizontal stresses. Simulations have been carried out on two datasets; one covering the Halten Terrace area and one the Tune Field area in the northern North Sea. The timing of hydraulic fracturing and amount of leakage has been quantified in the studies from the Halten Terrace area. This is mainly controlled by the lateral fluid flow and the permeability of the major faults in the basin. Low fault permeability gives early failure, while high fault permeabilities results in no or late hydraulic fracturing and leakage from overpressured parts of the basin. In addition to varying the transmissibility of all faults in a basin, the transmissibility across individual faults can be varied. Increasing the transmissibility across faults is of major importance in overpressured to intermediately pressured areas. However, to obtain change in the flow, a certain pressure difference has to be the situation between the different compartments. The coefficient of internal friction and the coefficient of frictional

  9. Air Leakage and Air Transfer Between Garage and Living Space

    Energy Technology Data Exchange (ETDEWEB)

    Rudd, A.

    2014-09-01

    This research project focused on evaluation of air transfer between the garage and living space in a single-family detached home constructed by a production homebuilder in compliance with the 2009 International Residential Code and the 2009 International Energy Conservation Code. The project gathered important information about the performance of whole-building ventilation systems and garage ventilation systems as they relate to minimizing flow of contaminated air from garage to living space. A series of 25 multi-point fan pressurization tests and additional zone pressure diagnostic testing characterized the garage and house air leakage, the garage-to-house air leakage, and garage and house pressure relationships to each other and to outdoors using automated fan pressurization and pressure monitoring techniques. While the relative characteristics of this house may not represent the entire population of new construction configurations and air tightness levels (house and garage) throughout the country, the technical approach was conservative and should reasonably extend the usefulness of the results to a large spectrum of house configurations from this set of parametric tests in this one house. Based on the results of this testing, the two-step garage-to-house air leakage test protocol described above is recommended where whole-house exhaust ventilation is employed. For houses employing whole-house supply ventilation (positive pressure) or balanced ventilation (same pressure effect as the Baseline condition), adherence to the EPA Indoor airPLUS house-to-garage air sealing requirements should be sufficient to expect little to no garage-to-house air transfer.

  10. Impeller leakage flow modeling for mechanical vibration control

    Science.gov (United States)

    Palazzolo, Alan B.

    1996-01-01

    HPOTP and HPFTP vibration test results have exhibited transient and steady characteristics which may be due to impeller leakage path (ILP) related forces. For example, an axial shift in the rotor could suddenly change the ILP clearances and lengths yielding dynamic coefficient and subsequent vibration changes. ILP models are more complicated than conventional-single component-annular seal models due to their radial flow component (coriolis and centrifugal acceleration), complex geometry (axial/radial clearance coupling), internal boundary (transition) flow conditions between mechanical components along the ILP and longer length, requiring moment as well as force coefficients. Flow coupling between mechanical components results from mass and energy conservation applied at their interfaces. Typical components along the ILP include an inlet seal, curved shroud, and an exit seal, which may be a stepped labyrinth type. Von Pragenau (MSFC) has modeled labyrinth seals as a series of plain annular seals for leakage and dynamic coefficient prediction. These multi-tooth components increase the total number of 'flow coupled' components in the ILP. Childs developed an analysis for an ILP consisting of a single, constant clearance shroud with an exit seal represented by a lumped flow-loss coefficient. This same geometry was later extended to include compressible flow. The objective of the current work is to: supply ILP leakage-force impedance-dynamic coefficient modeling software to MSFC engineers, base on incompressible/compressible bulk flow theory; design the software to model a generic geometry ILP described by a series of components lying along an arbitrarily directed path; validate the software by comparison to available test data, CFD and bulk models; and develop a hybrid CFD-bulk flow model of an ILP to improve modeling accuracy within practical run time constraints.

  11. The impact of daily covers on sidewall leakage in landfills

    Energy Technology Data Exchange (ETDEWEB)

    Welker, A. L. [Villanova Univ., Dept. of Civil Engineering, PA (United States)

    2000-09-01

    Typically, sanitary landfills are covered by 15 cm of locally available soil on a daily basis. This practice is intended to limit short term negative effects of the waste material on the above-ground environment such as odor, fire, or vermin attraction. Daily placement of compacted soil creates low hydraulic conductivity stratifying layers within the landfill which, in due course, may result in side-slope seepage, decreased stability and decreased efficiency of methane gas venting. The expense of soil acquisitions and the the diminishing availability of landfill space increases the need for alternative materials to replace the daily cover. This paper examines the the threat of sidewall landfill leakage for a hypothetical landfill with traditional soil cover and an alternative daily cover, to demonstrate that the threat of sidewall leakage is real and can be decreased with the use of alternative material as the daily cover such as crushed glass, sludge from waste-water treatment plants, industrial waste, foams and various geosynthetics. At the same time, results of the modelling study showed that with proper drainage sidewall seepage will not occur even with a daily cover that has a hydraulic conductivity two orders of magnitude smaller than the waste, despite positive pressure building up on top of the daily cover. These results imply that the threat of sidewall leakage is minimal, and while alternative daily cover material would help to reduce it even further, their use is most likely to be the result of economic, not technical, considerations. 12 refs., 3 tabs., 4 figs.

  12. Energetic magnetospheric ions at the dayside magnetopause: Leakage or merging?

    International Nuclear Information System (INIS)

    We elaborate upon the leakage model for the escape of energetic magnetospheric particles into the magnetosheath. Unlike the merging model, no interconnection (or merging) of magnetospheric and magnetosheath magnetic field lines is required. Because outer magnetospheric energetic particle drift paths intersect the magnetopause, the leakage model requires the continual escape of ions at postnoon local times and electrons at prenoon local times, regardless of solar wind conditions. It also predicts a division between dawnward and duskward streaming ions at the point where most magnetosheath magnetic field lines make their closest approach to the magnetopause, typically near 1500 LT. Like the merging model, the leakage model predicts equatorward streaming just inside the magnetopause. We study the motion of an escaping energetic ion at a planar magnetopause to show that, without scattering, ions must move dawnward and northward in a duskward magnetosheath magnetic field and dawnward and southward in a dawnward magnetosheath magnetic field. Scattering permits some ions to move duskward. We present new observations of streaming ions outside the dayside magnetopause made by the Charge Composition Explorer satellite, a part of the Active Magnetospheric Particle Tracer Explorers program. To place these observations in context, we have performed a statistical study of previous particle observations both inside and outside the dayside magnetopause. The ensemble of observations indicates that energetic magnetospheric ions of all species continually escape from the dayside magnetosphere and stream along magnetosheath magnetic field lines, even when no merging is expected. The magnetosheath magnetic field controls the direction in which the ions stream: they move away from the magnetosphere

  13. Power Beaming Leakage Radiation as a SETI Observable

    Science.gov (United States)

    Benford, James N.; Benford, Dominic J.

    2016-07-01

    The most observable leakage radiation from an advanced civilization may well be from the use of power beaming to transfer energy and accelerate spacecraft. Applications suggested for power beaming involve launching spacecraft to orbit, raising satellites to a higher orbit, and interplanetary concepts involving space-to-space transfers of cargo or passengers. We also quantify beam-driven launch to the outer solar system, interstellar precursors, and ultimately starships. We estimate the principal observable parameters of power beaming leakage. Extraterrestrial civilizations would know their power beams could be observed, and so could put a message on the power beam and broadcast it for our receipt at little additional energy or cost. By observing leakage from power beams we may find a message embedded on the beam. Recent observations of the anomalous star KIC 8462852 by the Allen Telescope Array (ATA) set some limits on extraterrestrial power beaming in that system. We show that most power beaming applications commensurate with those suggested for our solar system would be detectable if using the frequency range monitored by the ATA, and so the lack of detection is a meaningful, if modest, constraint on extraterrestrial power beaming in that system. Until more extensive observations are made, the limited observation time and frequency coverage are not sufficiently broad in frequency and duration to produce firm conclusions. Such beams would be visible over large interstellar distances. This implies a new approach to the SETI search: instead of focusing on narrowband beacon transmissions generated by another civilization, look for more powerful beams with much wider bandwidth. This requires a new approach for their discovery by telescopes on Earth. Further studies of power beaming applications should be performed, potentially broadening the parameter space of the observable features that we have discussed here.

  14. Early localization of containment leakage during an accident

    International Nuclear Information System (INIS)

    In case of an accident in a nuclear plant, checking the containment leaktightness would be a fundamental step for the diagnosis and prognosis of the radiological consequences. Significant help in this task can be provided by softwares. For that purpose, the French Atomic Energy Commission (CEA) is developing an expert system which can provide early in the accident a classification of the possible leakage paths and help understanding the necessary corrections which have to be undertaken by the utility. This software will be used at the Emergency Technical Center of the CEA. Its basic principles are described in this paper

  15. Leakage investigation at Shalamar Garden, Lahore using radioisotopes

    International Nuclear Information System (INIS)

    A sealed caesium-137 radiation source and 73 injections of sodium-24 in water soluble form have been successfully employed to detect leakage points and determine the layout pattern of a terracotta pipeline grid feeding the decorative fountains of the central tank in the middle terrace of Shalamar Garden, Lahore. The pipeline system is about 350 years old and no drawing or layout plan was available before the studies. The present investigation is an effort to help restore the original historic water supply system. (author)

  16. A study of tip-leakage flow through orifice investigations

    OpenAIRE

    Henry, Gregory S.

    1987-01-01

    Compressible fluid dynamics of flow through plain-faced long orifices was investigated with the hope of gaining insight into the fluid dynamics of tip leakage flow. The Reynolds number range investigated was greater than 10*. Measurements were made of the discharge coefficient as a function of back pressure ratio for a sharp-edged orifice and long orifices with an l/d from 1/2 to 8. The discharge coefficient measurements indicate the mass flow rate in an orifice with an l/d of ...

  17. A nationwide study on anastomotic leakage after colonic cancer surgery

    DEFF Research Database (Denmark)

    Krarup, Peter-Martin; Jorgensen, L N; Andreasen, A H;

    2012-01-01

    Aim: Anastomotic leakage (AL) is a major challenge in colorectal cancer surgery due to increased morbidity and mortality. Possible risk factors should be investigated differentially, distinguishing between rectal and colonic surgery in large-scale studies to avoid selection bias and confounding.......01-1.07; P = 0.03); blood transfusion (OR, 10.27; 95% CI, 6.82-15.45); P <0.001) and female gender (OR, 0.71; 95% CI, 0.57-0.89; P = 0.02) were associated with AL in the multivariate analysis. Conclusion: The main finding that a laparoscopic approach was associated with increased risk of AL should prompt...

  18. Numerical Simulations of Leakage from Underground LPG Storage Caverns

    Energy Technology Data Exchange (ETDEWEB)

    Yamamoto, Hajime; Pruess, Karsten

    2004-09-01

    To secure a stable supply of petroleum gas, underground storage caverns for liquified petroleum gas (LPG) are commonly used in many countries worldwide. Storing LPG in underground caverns requires that the surrounding rock mass remain saturated with groundwater and that the water pressure be higher than the liquid pressure inside the cavern. In previous studies, gas containment criteria for underground gas storage based on hydraulic gradient and pressure have been discussed, but these studies do not consider the physicochemical characteristics and behavior of LPG such as vaporization and dissolution in groundwater. Therefore, while these studies are very useful for designing storage caverns, they do not provide better understanding of the either the environmental effects of gas contamination or the behavior of vaporized LPG. In this study, we have performed three-phase fluid flow simulations of gas leakage from underground LPG storage caverns, using the multiphase multicomponent nonisothermal simulator TMVOC (Pruess and Battistelli, 2002), which is capable of solving the three-phase nonisothermal flow of water, gas, and a multicomponent mixture of volatile organic chemicals (VOCs) in multidimensional heterogeneous porous media. A two-dimensional cross-sectional model resembling an actual underground LPG facility in Japan was developed, and gas leakage phenomena were simulated for three different permeability models: (1) a homogeneous model, (2) a single-fault model, and (3) a heterogeneous model. In addition, the behavior of stored LPG was studied for the special case of a water curtain suddenly losing its function because of operational problems, or because of long-term effects such as clogging of boreholes. The results of the study indicate the following: (1) The water curtain system is a very powerful means for preventing gas leakage from underground storage facilities. By operating with appropriate pressure and layout, gas containment can be ensured. (2

  19. An Improved Method for Preventing Data Leakage in an Organization

    Directory of Open Access Journals (Sweden)

    Neetu Bose

    2016-04-01

    Full Text Available Data is one of the most important assets an organisation has since it denes each organisations unique- ness.It includes data on members and prospects, their inter- ests and purchases, your events, speakers, your content, social media, press, your staff, budget, strategic plan, and much more. As organizations open their doors to employees, part- ners, customers and suppliers to provide deeper access to sensitive information, the risk sassociated with business increase. Now, more than ever, within creasing threats of cyber terrorism, cor- porate governance issues, fraud, and identity theft, the need for securing corporate information has become paramount. Informa- tion theft is not just about external hackers and unauthorized external users stealing your data, it is also about managing internal employees and even contractors who may be working within your organization for short periods of time. Adding to the challenge of securing information is the increasing push for corporate governance and adherence to legislative or regulatory requirements. Failure to comply and provide privacy, audit and internal controls could result in penalties ranging from large nes to jail terms. Non-compliance can result in not only potential implications for executives, but also possible threats to the viability of a corporation. Insiders too represent a sign cant risk to data security. The task of detecting malicious insiders is very challenging as the methods of deception become more and more sophisticated. There are various solutions present to avoid data leakage. Data leakage detection, prevention (DLPM and monitoring solutions became an inherent component of the organizations security suite.DLP solutions monitors sensitive data when at rest, in motion, or in use and enforce the organizational data protection policy.These solutions focus mainly on the data and its sensitivity level, and on preventing it from reaching an unauthorized person. They ignore the fact

  20. Contrast media for radiological examination in gastrointestinal tract leakage

    International Nuclear Information System (INIS)

    The aim of this investigation has been to find a safe and suitable contrast medium (CM) for radiological evaluation of the gastrointestinal tract (GIT) in cases where leakage outside the GIT can be suspected. An experimental study was carried out to evaluate the reactions of various available CM in the bronchi and lungs, mediastinum, pleura and peritoneum of rats. The CM evaluated in the experimental study were, pure barium sulphate (without any additives), commercial barium sulphate (Micropaque, with additives), Dionosil, Hytrast, Gastrografin, Amipaque (in pleura Omnipaque) and Hexabrix. (Auth.)

  1. Application Of The Climafor Baseline To Determine Leakage: TheCase Of Scolel Te.

    Energy Technology Data Exchange (ETDEWEB)

    De Jong, B.H.J.; Bazan, E. Esquivel; Quechulpa Montalvo, S.

    2007-06-01

    The acceptance of forestry-based project activities tomitigate greenhouse gases emissions has been subjected to a number ofmethodological questions to be answered, of which the most challengingare baseline establishment and identification of and measuring leakage.Here we pose hypotheses for and quantify leakage of the Scolel Te projectin Chiapas, Mexico. In this project small-scale farmers are implementingforestry, agroforestry, and forest conservation activities, with carbonsequestration as one of the goals. The main leakage monitoring domain isdefined as the area owned by the participating farmers or communitiesoutside the area where the specific project activities take place. Thenull-hypothesis (no leakage) is that non-project land owned by the farmeror community will experience the same carbon stock changes as predictedby the regional baseline, specifically developed for the project. Firstwe assessed the most likely causes and sources of leakage that may occurin the project. From this analysis, one type of leakage seems to beimportant, i.e., activity shifting. Second we estimated the leakage of asample of participating farmers and communities. Actual land use was thencompared with expected land use derived from the baseline. The Plan Vivoof each participant, complemented with readily available tools toidentify the main sources and drivers of leakage are used to developsimple leakage assessment procedures, as demonstrated in this paper.Negative leakage was estimated to be negligible in this study.Incorporating these procedures already in the project planning stage willreduce the uncertainties related to the actual carbon mitigationpotential of any forestry project.

  2. Studies of axial-leakage simulations for homogeneous and heterogeneous EBR-II core configurations

    Energy Technology Data Exchange (ETDEWEB)

    Grimm, K.N.; Meneghetti, D.

    1985-08-01

    When calculations of flux are done in less than three dimensions, leakage-absorption cross sections are normally used to model leakages (flows) in the dimensions for which the flux is not calculated. Since the neutron flux is axially dependent, the leakages, and hence the leakage-absorption cross sections, are also axially dependent. Therefore, to obtain axial flux profiles (or reaction rates) for individual subassemblies, an XY-geometry calculation delineating each subassembly has to be done at several axial heights with space- and energy-dependent leakage-absorption cross sections that are appropriate for each height. This report discusses homogeneous and heterogeneous XY-geometry calculations at various axial locations and using several differing assumptions for the calculation of the leakage-absorption cross section. The positive (outward) leakage-absorption cross sections are modeled as actual leakage absorptions, but the negative (inward) leakage-absorption cross sections are modeled as either negative leakage absorptions (+-B/sup 2/ method) or positive downscatter cross sections (the ..sigma../sub s/(1 ..-->.. g) method). 3 refs., 52 figs., 10 tabs.

  3. Helium/solid powder O-ring leakage correlation experiments

    International Nuclear Information System (INIS)

    We have developed a method to test powder leakage that has passed O-ring seals. To validate this method we have spiked a test fixture with 98 ng of U and recovered 130 +- 25 ng of U. We did not detect U at a detection limit of 26 ng in a fixture which was treated as a blank. This method has been applied to the leakage of UO2 powder passing the type of EPDM O-ring seals used in a SNM shipping cask belonging to PNC. Considering the three experimental tests in which no or very small quantities of U were detected as effective blank test, it appears that the level of external contamination is negligible. Therefore, we believe that the U quantities greater than 26 ng (6 tests) passed the primary O-ring seal. From this limited quantity of data, we observe no apparent correlation between the amount of U measured and either helium leak rate or equivalent tube diameter. The data for the 1300C tests indicate the possibility of a U/time relationship; however, more data are needed for verification

  4. Secure Mobile Agent from Leakage-Resilient Proxy Signatures

    Directory of Open Access Journals (Sweden)

    Fei Tang

    2015-01-01

    Full Text Available A mobile agent can sign a message in a remote server on behalf of a customer without exposing its secret key; it can be used not only to search for special products or services, but also to make a contract with a remote server. Hence a mobile agent system can be used for electronic commerce as an important key technology. In order to realize such a system, Lee et al. showed that a secure mobile agent can be constructed using proxy signatures. Intuitively, a proxy signature permits an entity (delegator to delegate its signing right to another entity (proxy to sign some specified messages on behalf of the delegator. However, the proxy signatures are often used in scenarios where the signing is done in an insecure environment, for example, the remote server of a mobile agent system. In such setting, an adversary could launch side-channel attacks to exploit some leakage information about the proxy key or even other secret states. The proxy signatures which are secure in the traditional security models obviously cannot provide such security. Based on this consideration, in this paper, we design a leakage-resilient proxy signature scheme for the secure mobile agent systems.

  5. The impact of added insulation on air leakage

    Energy Technology Data Exchange (ETDEWEB)

    Anon

    2002-01-01

    It is relatively easy to calculate the impact on energy consumption when thermal insulation is added to the building envelope. However, other effects such as air leakage through the exterior wall assembly, and the potential for water condensation also have to be considered. By adding insulation to the exterior wall assembly, the temperature gradient of the wall is changed and the risk of condensation is increased, especially if warm, moist indoor air can flow through the wall. The study by Dominique Derome, Paul Fazio and Guylaine Desmarais for the CMHC Research Division, of which this paper is a summary, examined three types of air leakage paths, i.e. long air exfiltration path; concentrated air exfiltration path; and distributed exfiltration path. Experiments involved placing 38 mm rigid extruded polystyrene insulation on the interior side of three wood studs and fiberglass batt insulation wall assemblies, while four other samples had the same 38 mm rigid extruded polystyrene insulation added on the exterior of the assembly over the fiberboard sheathing. Both, warm and cold side additions of rigid foam insulation to the existing assemblies increased thermal performance by 55 per cent. When blown cellulose fibre was used as insulation instead of fibreglass batting, the increase in thermal performance was 66 per cent. Addition of the rigid foam insulation on the warm side tended to increase the effectiveness. For example, moisture content generally did not rise above 25 per cent, whereas it could climb up to 70 per cent when the insulation was added on the cold side.

  6. Assessment of leakage from an engineered reservoir using hydrogeological tools

    Energy Technology Data Exchange (ETDEWEB)

    Smerdon, B.D.; Mendoza, C.A. [Alberta Univ., Edmonton, AB (Canada); McCann, A.; Kraushar, C. [Omni-McCann Consultants Ltd., Edmonton, AB (Canada); Nilson, A. [Alberta Infrastructure, Edmonton, AB (Canada)

    2003-07-01

    Seepage from earth-filled dams can be determined using steady-state, cross sectional, flow net analysis or transient response to fluid pressure within dam construction materials. This paper described the methods used to quantify leakage from a surface-water reservoir (Pine Coulee) located in southern Alberta. The methods included buried valley aquifer tests, three-dimensional groundwater flow simulations and stable isotope water samples. The aquifer tests were conducted when the reservoir was maintained at leaking elevation as well as when it was at non-leaking elevation. When the reservoir was leaking, the results showed a recharge boundary condition in the aquifer. When the reservoir was not leaking, a barrier boundary was present. To verify field-measured parameters and to determine the hydraulic properties and location of the leakage zone, three-dimensional groundwater flow simulations were calibrated to the datasets. Stable isotopes confirmed the seepage of reservoir water to the aquifer. Seepage rates and the required aquifer pumping rates to control aquifer water levels were predicted by the model. The results were in good agreement with field observations since relief well installation. The use of hydrogeological tools proved to be diagnostic and predictive in assessing the subsurface dynamics associated with man-made reservoirs. 15 refs., 2 tabs., 6 figs.

  7. Greater focus needed on methane leakage from natural gas infrastructure.

    Science.gov (United States)

    Alvarez, Ramón A; Pacala, Stephen W; Winebrake, James J; Chameides, William L; Hamburg, Steven P

    2012-04-24

    Natural gas is seen by many as the future of American energy: a fuel that can provide energy independence and reduce greenhouse gas emissions in the process. However, there has also been confusion about the climate implications of increased use of natural gas for electric power and transportation. We propose and illustrate the use of technology warming potentials as a robust and transparent way to compare the cumulative radiative forcing created by alternative technologies fueled by natural gas and oil or coal by using the best available estimates of greenhouse gas emissions from each fuel cycle (i.e., production, transportation and use). We find that a shift to compressed natural gas vehicles from gasoline or diesel vehicles leads to greater radiative forcing of the climate for 80 or 280 yr, respectively, before beginning to produce benefits. Compressed natural gas vehicles could produce climate benefits on all time frames if the well-to-wheels CH(4) leakage were capped at a level 45-70% below current estimates. By contrast, using natural gas instead of coal for electric power plants can reduce radiative forcing immediately, and reducing CH(4) losses from the production and transportation of natural gas would produce even greater benefits. There is a need for the natural gas industry and science community to help obtain better emissions data and for increased efforts to reduce methane leakage in order to minimize the climate footprint of natural gas. PMID:22493226

  8. Credibility Assessments as 'Normative Leakage': Asylum Applications, Gender and Class

    Directory of Open Access Journals (Sweden)

    Hanna Wikström

    2013-10-01

    Full Text Available Based on the assumption that credibility assessments function as 'normative leakage' within the asylum process, we analyse how narratives of gender and class are articulated, rendered meaningful, or silenced in credibility assessments. Two cases concerning male applicants are selected in order to illustrate these processes. In relation to the existing concepts of internal/external credibility, we wish to introduce the concept of social credibility, which focuses on how the assessors read different socio-cultural narratives. While previous research has shown that the postcolonial will to protect women favours women as victims of patriarchal cultures, we wish to point out the continuity of this line of argumentation in relation to male and female applicants by adopting a theoretical generalization: male applicants instead become situated at the other end of the spectrum of postcolonial notions of modernity as non-victims, victims of other circumstances or perpetrators. We argue that these processes are accentuated in relation to credibility assessments. In order to prevent processes of social exclusion and to enhance inclusive practice, authorities need to acknowledge the 'normative leakage' associated with the assessment process.

  9. Detection and quantification of methane leakage from landfills

    Energy Technology Data Exchange (ETDEWEB)

    Ljungberg, Sven-Aake; Maartensson, Stig-Goeran (Univ. of Gaevle, Gaevle (Sweden)); Meijer, Jan-Erik; Rosqvist, Haakan (NSR AB, Helsingborg (Sweden))

    2009-03-15

    The purpose of this project was to detect gas leakage and to measure and quantify methane emission from landfills using modern remote sensing techniques. In this project, a handheld laser instrument and an IR camera were used. The overall objective was to develop cost-effective methods for detecting and quantifying methane emissions from landfills. There are many methods available for measuring the methane concentration in air, both from close-up and from long distances. Combined with the use of a tracer gas, the methane emission from entire landfills can be measured relatively accurately. A number of methods are used to detect leakage from parts of landfill surfaces, but there are few methods for quantifying leakage from sub-zones. Field measurements with the laser instrument and the IR camera were carried out at seven Swedish landfills and two landfills in France. The investigated surfaces at the Swedish landfills were divided into different zones, such as top surface, slope, crest and toe of slope. The field measurements in France were taken over entire landfills. The methane emission varied between the different landfills in the project, and also between the different landfill zones. The results from repeated field measurements indicated that a landfill with a final cap and a successful gas recovery system produces barely measurable emissions. The weak points at a landfill are generally slopes, including crests and toes of slopes. Where the covering of the waste is inadequate, leakage often occurs at lift joints and in areas where waste protrudes through the cover. Other weak points are deficiencies in the gas recovery system. Leachate systems can lead landfill gas and thereby cause methane leakage. Along with wind velocity and variations in atmospheric pressure, moisture content in the ground is an important factor that affects methane emissions from landfill surfaces. Results from field measurements of the same feature/surface at different points in time and

  10. Leakage current measurements on pixelated CdZnTe detectors

    International Nuclear Information System (INIS)

    In the field of the R and D of a new generation hard X-ray cameras for space applications we focus on the use of pixelated CdTe or CdZnTe semiconductor detectors. They are covered with 64 (0.9x0.9 mm2) or 256 (0.5x0.5 mm2) pixels, surrounded by a guard ring and operate in the energy ranging from several keV to 1 MeV, at temperatures between -20 and +20 oC. A critical parameter in the characterisation of these detectors is the leakage current per pixel under polarisation (∼50-500 V/mm). In operation mode each pixel will be read-out by an integrated spectroscopy channel of the multi-channel IDeF-X ASIC currently developed in our lab. The design and functionality of the ASIC depends directly on the direction and value of the current. A dedicated and highly insulating electronics circuit is designed to automatically measure the current in each individual pixel, which is in the order of tens of pico-amperes. Leakage current maps of different CdZnTe detectors of 2 and 6 mm thick and at various temperatures are presented and discussed. Defect density diagnostics have been performed by calculation of the activation energy of the material

  11. SETI via Leakage from Light Sails in Exoplanetary Systems

    CERN Document Server

    Guillochon, James

    2015-01-01

    The primary challenge of rocket propulsion is the burden of needing to accelerate the spacecraft's own fuel, resulting in only a logarithmic gain in maximum speed as propellant is added to the spacecraft. Light sails offer an attractive alternative in which fuel is not carried by the spacecraft, with acceleration being provided by an external source of light. By artificially illuminating the spacecraft with beamed radiation, speeds are only limited by the area of the sail, heat resistance of its material, and power use of the accelerating apparatus. In this paper, we show that leakage from a light sail propulsion apparatus in operation around a solar system analogue would be detectable. To demonstrate this, we model the launch and arrival of a microwave beam-driven light sail constructed for transit between planets in orbit around a single star, and find an optimal beam frequency on the order of tens of GHz. Leakage from these beams yields transients with flux densities of 0.1 Jy and durations of seconds at 1...

  12. Subthreshold Leakage Minimization in MOSFET using Sleep Transistor Circuit

    Directory of Open Access Journals (Sweden)

    Shailesh Kumar Mukati

    2014-05-01

    Full Text Available The excessive power consumption has become one in all the first hindrances to the more advances of CMOS integrated circuits. Low power circuit style is a crucial analysis space. there are 3 primary stimuli for low power circuit design: setting friendly inexperienced computing, battery life extension for mobile applications, and rising self-sufficing battery replacement free applications like intelligent sensing element nodes. The leakage current in MOSFET is due to subthreshold leakage current due to parasitic pn junctions. The sleep transistor is use between CMOS logic and supply rail. Our technique, sleep transistor square measure placed between the circuits offer and provide rails to show off the run current flow throughout idle time this will be done by victimization one PMOS transistor and one NMOS transistor nonparallel with the transistors of every logic block to make a virtual ground and a virtual power supply. constant estimation victimization town simulation will acquire a comparatively correct estimation of the run distribution; but, this methodology needs an extended simulation time and is therefore computationally expensive

  13. Wind-induced internal pressure response for structure with single windward opening and background leakage

    Institute of Scientific and Technical Information of China (English)

    Shi-ce YU; Wen-juan LOU; Bing-nan SUN

    2008-01-01

    Theoretical analysis and wind tunnel tests were carried out to study wind-induced internal pressure response for the structure with single windward opening and background leakage. Its governing differential equation was derived by the Bernoulli equation in an unsteady-isentropic form. Numerical examples were provided to study the additive damping caused by background leakage in laminar and turbulent flow, and the influence of background leakage on fluctuating internal pressure response was quantized. A series of models for low-rise building with various opening ratios and background leakage were designed and wind tunnel tests were conducted. It is shown that the fluctuating internal pressure reduces when the background leakage are considered and that the effect of background leakage can be predicted accurately by the governing differential equation deduced in this paper.

  14. Helium/solid powder O-ring leakage correlation experiments using a radiotracer

    International Nuclear Information System (INIS)

    UO2 definitely leaked past the O-ring in three of the tests confirming the major results of the previous work. Continuous leakage at these levels may require additional precautions under present regulatory policies. The mechanism and the time and particle size dependence for the leakage are not known, but there is some indication leakage is more likely at low temperatures. It is possible leakage is due to movement of the O-ring during temperature or pressure cycling at the beginning or end of a test. The radiotracer method involves less labor and is much less susceptible to contamination than the previous method. Future work will investigate leakage past lubricated O-rings and time dependence of leakage. 1 reference, 1 table

  15. Decision on Leakage of Heat-supply Pipe Network Based on Multi-sensor Information Merge

    OpenAIRE

    Pan-pan Zhao; Xiu-fang Wang; Hong-bo Bi; Qi Yang

    2013-01-01

    The complicated structure of heat-supply pipe network leads to the issue that the leakage position is difficult to locate by a single sensor. We propose to exploit the merge information by multi-sensor to determine the leakage pipeline section. The mathematical model is first established according to the topology of the pipe network. Furthermore, We present the concept of leakage time difference vector group and assign the elementary probability according to the cosine of the intersection ang...

  16. Modeling of leakage currents in high-k dielectrics

    Energy Technology Data Exchange (ETDEWEB)

    Jegert, Gunther Christian

    2012-03-15

    Leakage currents are one of the major bottlenecks impeding the downscaling efforts of the semiconductor industry. Two core devices of integrated circuits, the transistor and, especially, the DRAM storage capacitor, suffer from the increasing loss currents. In this perspective a fundamental understanding of the physical origin of these leakage currents is highly desirable. However, the complexity of the involved transport phenomena so far has prevented the development of microscopic models. Instead, the analysis of transport through the ultra-thin layers of high-permittivity (high-k) dielectrics, which are employed as insulating layers, was carried out at an empirical level using simple compact models. Unfortunately, these offer only limited insight into the physics involved on the microscale. In this context the present work was initialized in order to establish a framework of microscopic physical models that allow a fundamental description of the transport processes relevant in high-k thin films. A simulation tool that makes use of kinetic Monte Carlo techniques was developed for this purpose embedding the above models in an environment that allows qualitative and quantitative analyses of the electronic transport in such films. Existing continuum approaches, which tend to conceal the important physics behind phenomenological fitting parameters, were replaced by three-dimensional transport simulations at the level of single charge carriers. Spatially localized phenomena, such as percolation of charge carriers across pointlike defects, being subject to structural relaxation processes, or electrode roughness effects, could be investigated in this simulation scheme. Stepwise a self-consistent, closed transport model for the TiN/ZrO{sub 2} material system, which is of outmost importance for the semiconductor industry, was developed. Based on this model viable strategies for the optimization of TiN/ZrO{sub 2}/TiN capacitor structures were suggested and problem areas

  17. Modeling of leakage currents in high-k dielectrics

    International Nuclear Information System (INIS)

    Leakage currents are one of the major bottlenecks impeding the downscaling efforts of the semiconductor industry. Two core devices of integrated circuits, the transistor and, especially, the DRAM storage capacitor, suffer from the increasing loss currents. In this perspective a fundamental understanding of the physical origin of these leakage currents is highly desirable. However, the complexity of the involved transport phenomena so far has prevented the development of microscopic models. Instead, the analysis of transport through the ultra-thin layers of high-permittivity (high-k) dielectrics, which are employed as insulating layers, was carried out at an empirical level using simple compact models. Unfortunately, these offer only limited insight into the physics involved on the microscale. In this context the present work was initialized in order to establish a framework of microscopic physical models that allow a fundamental description of the transport processes relevant in high-k thin films. A simulation tool that makes use of kinetic Monte Carlo techniques was developed for this purpose embedding the above models in an environment that allows qualitative and quantitative analyses of the electronic transport in such films. Existing continuum approaches, which tend to conceal the important physics behind phenomenological fitting parameters, were replaced by three-dimensional transport simulations at the level of single charge carriers. Spatially localized phenomena, such as percolation of charge carriers across pointlike defects, being subject to structural relaxation processes, or electrode roughness effects, could be investigated in this simulation scheme. Stepwise a self-consistent, closed transport model for the TiN/ZrO2 material system, which is of outmost importance for the semiconductor industry, was developed. Based on this model viable strategies for the optimization of TiN/ZrO2/TiN capacitor structures were suggested and problem areas that may arise

  18. Detection of gaseous heavy water leakage points in CANDU 6 pressurized heavy water reactors

    International Nuclear Information System (INIS)

    During reactor operation, the heavy water filled primary coolant system in a CANDU 6 Pressurized Heavy Water (PHWR) may leak through routine operations of the plant via components, mechanical joints, and during inadvertent operations etc. Early detection of leak points is therefore important to maintain plant safety and economy. There are many independent systems to monitor and recover heavy water leakage in a CANDU 6 PHWR. Methodology for early detection based on operating experience from these systems, is investigated in this paper. In addition, the four symptoms of D2O leakage, the associated process for clarifying and verifying the leakage, and the probable points of leakage are discussed. (author)

  19. BackTrack Input Vector Algorithm for Leakage Reduction in CMOS VLSI Digital Circuit Design

    OpenAIRE

    Uday Panwar; Kavita Khare

    2014-01-01

    A new algorithm based on Input Vector Control (IVC) technique is proposed, which shifts logic gate of a circuit to its minimum leakage state, when device goes into its idle state. Leakage current in CMOS VLSI circuit has become a major constrain in a battery operated device for technology node below 90nm, as it drains the battery even when a circuit is in standby mode. Major concern is the leakage even in run time condition, here aim is to focus on run time leakage reduction techn...

  20. Radiation-induced off-state leakage current in commercial power MOSFETs

    International Nuclear Information System (INIS)

    The total dose hardness of several commercial power MOSFET technologies is examined. After exposure to 20 krad(SiO2) most of the n- and p-channel devices examined in this work show substantial (2 to 6 orders of magnitude) increases in off-state leakage current. For the n-channel devices, the increase in radiation-induced leakage current follows standard behavior for moderately thick gate oxides, i.e., the increase in leakage current is dominated by large negative threshold voltage shifts, which cause the transistor to be partially on even when no bias is applied to the gate electrode. N-channel devices biased during irradiation show a significantly larger leakage current increase than grounded devices. The increase in leakage current for the p-channel devices, however, was unexpected. For the p-channel devices, it is shown using electrical characterization and simulation that the radiation-induced leakage current increase is related to an increase in the reverse bias leakage characteristics of the gated diode which is formed by the drain epitaxial layer and the body. This mechanism does not significantly contribute to radiation-induced leakage current in typical p-channel MOS transistors. The p-channel leakage current increase is nearly identical for both biased and grounded irradiations and therefore has serious implications for long duration missions since even devices which are usually powered off could show significant degradation and potentially fail.

  1. Contribution to leakage-events and frequency caused by maintenance errors

    International Nuclear Information System (INIS)

    The estimation of frequencies of initializing event leak is based on evaluation of circumstances connected with frequencies of events evaluated from operating experience. Examples are given: flooding of the torus of the reactor building risk study; VVER-reactor leakage outside confinement; leakage from a filter housing of the primary system. Operating experience shows that failures of flange sealing are of importance, leakage rates are up to 40 t/h, pumps shaft sealing can reach 150 t/h under special circumstances, the frequencies are sometimes higher than leakages from cracks, especially maintenance and operator error are important

  2. AutoDrug: fully automated macromolecular crystallography workflows for fragment-based drug discovery

    International Nuclear Information System (INIS)

    New software has been developed for automating the experimental and data-processing stages of fragment-based drug discovery at a macromolecular crystallography beamline. A new workflow-automation framework orchestrates beamline-control and data-analysis software while organizing results from multiple samples. AutoDrug is software based upon the scientific workflow paradigm that integrates the Stanford Synchrotron Radiation Lightsource macromolecular crystallography beamlines and third-party processing software to automate the crystallography steps of the fragment-based drug-discovery process. AutoDrug screens a cassette of fragment-soaked crystals, selects crystals for data collection based on screening results and user-specified criteria and determines optimal data-collection strategies. It then collects and processes diffraction data, performs molecular replacement using provided models and detects electron density that is likely to arise from bound fragments. All processes are fully automated, i.e. are performed without user interaction or supervision. Samples can be screened in groups corresponding to particular proteins, crystal forms and/or soaking conditions. A single AutoDrug run is only limited by the capacity of the sample-storage dewar at the beamline: currently 288 samples. AutoDrug was developed in conjunction with RestFlow, a new scientific workflow-automation framework. RestFlow simplifies the design of AutoDrug by managing the flow of data and the organization of results and by orchestrating the execution of computational pipeline steps. It also simplifies the execution and interaction of third-party programs and the beamline-control system. Modeling AutoDrug as a scientific workflow enables multiple variants that meet the requirements of different user groups to be developed and supported. A workflow tailored to mimic the crystallography stages comprising the drug-discovery pipeline of CoCrystal Discovery Inc. has been deployed and successfully

  3. AutoDrug: fully automated macromolecular crystallography workflows for fragment-based drug discovery

    Energy Technology Data Exchange (ETDEWEB)

    Tsai, Yingssu [Stanford University, 2575 Sand Hill Road, Menlo Park, CA 94025 (United States); Stanford University, 333 Campus Drive, Mudd Building, Stanford, CA 94305-5080 (United States); McPhillips, Scott E.; González, Ana; McPhillips, Timothy M. [Stanford University, 2575 Sand Hill Road, Menlo Park, CA 94025 (United States); Zinn, Daniel [LogicBlox Inc., 1349 West Peachtree Street NW, Atlanta, GA 30309 (United States); Cohen, Aina E. [Stanford University, 2575 Sand Hill Road, Menlo Park, CA 94025 (United States); Feese, Michael D.; Bushnell, David [Cocrystal Discovery Inc., 19805 North Creek Parkway, Bothell, WA 98011 (United States); Tiefenbrunn, Theresa; Stout, C. David [The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037 (United States); Ludaescher, Bertram [University of California, One Shields Avenue, Davis, CA 95616 (United States); Hedman, Britt; Hodgson, Keith O. [Stanford University, 2575 Sand Hill Road, Menlo Park, CA 94025 (United States); Stanford University, 333 Campus Drive, Mudd Building, Stanford, CA 94305-5080 (United States); Soltis, S. Michael, E-mail: soltis@slac.stanford.edu [Stanford University, 2575 Sand Hill Road, Menlo Park, CA 94025 (United States)

    2013-05-01

    New software has been developed for automating the experimental and data-processing stages of fragment-based drug discovery at a macromolecular crystallography beamline. A new workflow-automation framework orchestrates beamline-control and data-analysis software while organizing results from multiple samples. AutoDrug is software based upon the scientific workflow paradigm that integrates the Stanford Synchrotron Radiation Lightsource macromolecular crystallography beamlines and third-party processing software to automate the crystallography steps of the fragment-based drug-discovery process. AutoDrug screens a cassette of fragment-soaked crystals, selects crystals for data collection based on screening results and user-specified criteria and determines optimal data-collection strategies. It then collects and processes diffraction data, performs molecular replacement using provided models and detects electron density that is likely to arise from bound fragments. All processes are fully automated, i.e. are performed without user interaction or supervision. Samples can be screened in groups corresponding to particular proteins, crystal forms and/or soaking conditions. A single AutoDrug run is only limited by the capacity of the sample-storage dewar at the beamline: currently 288 samples. AutoDrug was developed in conjunction with RestFlow, a new scientific workflow-automation framework. RestFlow simplifies the design of AutoDrug by managing the flow of data and the organization of results and by orchestrating the execution of computational pipeline steps. It also simplifies the execution and interaction of third-party programs and the beamline-control system. Modeling AutoDrug as a scientific workflow enables multiple variants that meet the requirements of different user groups to be developed and supported. A workflow tailored to mimic the crystallography stages comprising the drug-discovery pipeline of CoCrystal Discovery Inc. has been deployed and successfully

  4. Leakage detection system for radioactive waste storage tanks

    International Nuclear Information System (INIS)

    The patent describes a combination of elements for detecting leakage of electrically conductive fluids from tanks, including a reference electrode, an AC generator connected between the tank and the reference electrode, and one or more sensing electrodes positioned between the tank and the reference electrode. The storage tank and reference electrode are in contact with the ground. When the AC generator is energized, current flows in the circuit, and creates an electric field in the ground between the tank and the reference electrode. The sensing electrodes are positioned so that they are within the electric field when the AC generator is energized. An electric potential measuring device, such as a voltmeter, is used to measure the electric potential at the sensing electrodes relative to the tank. A significant change in the electric potential at any one or more of the sensing electrodes is an indication that a leak has occurred in the tank

  5. Scattering anisotropy and neutron leakage in a reactor lattice

    International Nuclear Information System (INIS)

    Scattering anisotropy is often taken into account, in an isotropic formalism by a transport correction. This correction which, even in a homogeneous medium, is known to be false in multigroup theory, is always incorrect for the calculation of neutron leakages in a lattice. The method presented here allows to calculate the diffusion coefficients in a Wigner-Seitz cell, at the zeroth order in powers of the buckling, for a linearly anisotropic scattering law; it allows to test the degree of approximation of the transport correction in various types of lattices. This correction appears to be a good approximation as far as the radial diffusion coefficient is concerned, but it may strongly underestimate the axial coefficient in certain types of lattices. The method allows to study the problems of correlation between groups which appear in the calculation of diffusion coefficients

  6. Probabilistic modeling of caprock leakage from seismic reflection data

    DEFF Research Database (Denmark)

    Zunino, Andrea; Hansen, Thomas Mejer; Bergjofd-Kitterød, Ingjerd;

    are then modeled at each step of data collection, data processing, data interpretation, geostatistical inversion and petrophysics by means of probability density functions. Moreover, fault zones are not represented as zero thickness planes in a structural modeling fashion but as possible extended zones......We illustrate a methodology which helps to perform a leakage risk analysis for a CO2 reservoir based on a consistent, probabilistic approach to geophysical and geostatistical inversion. Generally, risk assessments of storage complexes are based on geological models and simulations of CO2 movement...... within the storage complexes. The geological models are built on top of geophysical data such as seismic surveys, geological information and well logs from the reservoir or nearby regions. The risk assessment of CO2 storage requires a careful analysis which accounts for all sources of uncertainty...

  7. Structural and leakage integrity of tubes affected by circumferential cracking

    Energy Technology Data Exchange (ETDEWEB)

    Hernalsteen, P. [TRACTEBEL, Brussels (Belgium)

    1997-02-01

    In this paper the author deals with the notion that circumferential cracks are generally considered unacceptable. He argues for the need to differentiate two facets of such cracks: the issue of the size and growth rate of a crack; and the issue of the structural strength and leakage potential of the tube in the presence of the crack. In this paper the author tries to show that the second point is not a major concern for such cracks. The paper presents data on the structural strength or burst pressure characteristics of steam generator tubes derived from models and data bases of experimental work. He also presents a leak rate model, and compares the performance of circumferential and axial cracks as far as burst strength and leak rate. The final conclusion is that subject to improvement in NDE capabilities (sizing, detection, growth), that Steam Generator Defect Specific Management can be used to allow circumferentially degraded tubes to remain in service.

  8. Modern diagnostic systems for loose parts, vibration and leakage monitoring

    International Nuclear Information System (INIS)

    The modern diagnostic systems for loose parts, vibration and leakage monitoring of Siemens marked improvements in signal detection, ease of operation, and the display of information. The paper gives an overview on: Loose parts monitoring system KUeS '95 - a computer-based system. The knowledge and experience about loose parts detection incorporated into this system can be characterized as ''intelligence''. Vibration monitoring system SUeS '95 - a fully automated system for early detection of changes in the vibration patterns of the reactor coolant system components and reactor pressure vessel internals. Leak detection system FLUeS - a system that detects even small leaks in steam-carrying components and very accurately determines their location. Leaks are detected on the moisture distribution in a sample air column into which the escaping steam locally diffuses. All systems described represent the latest state of technology. Nevertheless a considerable amount of operational experience can be reported. (author). 5 refs, 10 figs

  9. Securing the best performance entitlement from MFL (Magnetic Flus Leakage)

    Energy Technology Data Exchange (ETDEWEB)

    Mullin, Ian P. [GE Oil and Gas, PII Pipeline Solutions, Stutensee (Germany)

    2009-07-01

    Magnetic Flux Leakage (MFL) tools are used to inspect around 70-80% of pipelines in the world, and the art of designing these tools has been established over the past 40 years. This paper investigates the science behind the art, and describes the fundamentals of MFL magnetiser design, focusing on the effects that various design options have on magnetic performance. Comparisons are drawn between a magnetiser bar design (hereafter referenced as 'magbar') and solid core bristle design (hereafter referenced as 'sweep's brush') including variations upon each. The study was carried out through the combined use of Vector Fields 3D and 2D finite element modelling and analysis software. (author)

  10. Evaluation of Surface Cracks Using Magnetic Flux Leakage Testing

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The magnetic field distribution characteristics of surface cracks with various widths are discussed based on finite element (FEM) results. The crack depth was 0.20 mm, the width range was from 0.02 to 1.00 mm. The results showed that crack width and lift-off (the distance between surface and sensor) will influence signals. Discussed in this paper is the influence of various lift-off parameters on the peak to peak values of the normal component in magnetic flux leakage testing. The effects can be applied to evaluate surface breaking cracks of different widths and depths.An idea is presented to smooth narrow, sharp crack tips using alternating current (AC) field magnetization.

  11. On Leakage from Geologic Storage Reservoirs of CO2

    Energy Technology Data Exchange (ETDEWEB)

    Pruess, Karsten

    2006-02-14

    Large amounts of CO2 would need to be injected underground to achieve a significant reduction of atmospheric emissions. The large areal extent expected for CO2 plumes makes it likely that caprock imperfections will be encountered, such as fault zones or fractures, which may allow some CO2 to escape from the primary storage reservoir. Leakage of CO2 could also occur along wellbores. Concerns with escape of CO2 from a primary geologic storage reservoir include (1) acidification of groundwater resources, (2) asphyxiation hazard when leaking CO2 is discharged at the land surface, (3) increase in atmospheric concentrations of CO2, and (4) damage from a high-energy, eruptive discharge (if such discharge is physically possible). In order to gain public acceptance for geologic storage as a viable technology for reducing atmospheric emissions of CO2, it is necessary to address these issues and demonstrate that CO2 can be injected and stored safely in geologic formations.

  12. Moisture Risk in Unvented Attics Due to Air Leakage Paths

    Energy Technology Data Exchange (ETDEWEB)

    Prahl, D. [IBACOS, Inc., Pittsburgh, PA (United States); Shaffer, M. [IBACOS, Inc., Pittsburgh, PA (United States)

    2014-11-01

    IBACOS completed an initial analysis of moisture damage potential in an unvented attic insulated with closed-cell spray polyurethane foam. To complete this analysis, the research team collected field data, used computational fluid dynamics to quantify the airflow rates through individual airflow (crack) paths, simulated hourly flow rates through the leakage paths with CONTAM software, correlated the CONTAM flow rates with indoor humidity ratios from Building Energy Optimization software, and used Wärme und Feuchte instationär Pro two-dimensional modeling to determine the moisture content of the building materials surrounding the cracks. Given the number of simplifying assumptions and numerical models associated with this analysis, the results indicate that localized damage due to high moisture content of the roof sheathing is possible under very low airflow rates. Reducing the number of assumptions and approximations through field studies and laboratory experiments would be valuable to understand the real-world moisture damage potential in unvented attics.

  13. Moisture Risk in Unvented Attics Due to Air Leakage Paths

    Energy Technology Data Exchange (ETDEWEB)

    Prahl, D.; Shaffer, M.

    2014-11-01

    IBACOS completed an initial analysis of moisture damage potential in an unvented attic insulated with closed-cell spray polyurethane foam. To complete this analysis, the research team collected field data, used computational fluid dynamics to quantify the airflow rates through individual airflow (crack) paths, simulated hourly flow rates through the leakage paths with CONTAM software, correlated the CONTAM flow rates with indoor humidity ratios from Building Energy Optimization software, and used Warme und Feuchte instationar Pro two-dimensional modeling to determine the moisture content of the building materials surrounding the cracks. Given the number of simplifying assumptions and numerical models associated with this analysis, the results indicate that localized damage due to high moisture content of the roof sheathing is possible under very low airflow rates. Reducing the number of assumptions and approximations through field studies and laboratory experiments would be valuable to understand the real-world moisture damage potential in unvented attics.

  14. Research on airborne infrared leakage detection of natural gas pipeline

    Science.gov (United States)

    Tan, Dongjie; Xu, Bin; Xu, Xu; Wang, Hongchao; Yu, Dongliang; Tian, Shengjie

    2011-12-01

    An airborne laser remote sensing technology is proposed to detect natural gas pipeline leakage in helicopter which carrying a detector, and the detector can detect a high spatial resolution of trace of methane on the ground. The principle of the airborne laser remote sensing system is based on tunable diode laser absorption spectroscopy (TDLAS). The system consists of an optical unit containing the laser, camera, helicopter mount, electronic unit with DGPS antenna, a notebook computer and a pilot monitor. And the system is mounted on a helicopter. The principle and the architecture of the airborne laser remote sensing system are presented. Field test experiments are carried out on West-East Natural Gas Pipeline of China, and the results show that airborne detection method is suitable for detecting gas leak of pipeline on plain, desert, hills but unfit for the area with large altitude diversification.

  15. [A mobile sensor for remote detection of natural gas leakage].

    Science.gov (United States)

    Zhang, Shuai; Liu, Wen-qing; Zhang, Yu-jun; Kan, Rui-feng; Ruan, Jun; Wang, Li-ming; Yu, Dian-qiang; Dong, Jin-ting; Han, Xiao-lei; Cui, Yi-ben; Liu, Jian-guo

    2012-02-01

    The detection of natural gas pipeline leak becomes a significant issue for body security, environmental protection and security of state property. However, the leak detection is difficult, because of the pipeline's covering many areas, operating conditions and complicated environment. A mobile sensor for remote detection of natural gas leakage based on scanning wavelength differential absorption spectroscopy (SWDAS) is introduced. The improved soft threshold wavelet denoising was proposed by analyzing the characteristics of reflection spectrum. And the results showed that the signal to noise ratio (SNR) was increased three times. When light intensity is 530 nA, the minimum remote sensitivity will be 80 ppm x m. A widely used SWDAS can make quantitative remote sensing of natural gas leak and locate the leak source precisely in a faster, safer and more intelligent way. PMID:22512213

  16. Quench tank in-leakage diagnosis at St. Lucie

    Energy Technology Data Exchange (ETDEWEB)

    Price, J.E.; Au-Yang, M.K.; Beckner, D.A.; Vickery, A.N.

    1996-12-01

    In February 1995, leakage into the quench tank of the St. Lucie Nuclear Station Unit 1 was becoming an operational concern. This internal leak resulted in measurable increases in both the temperature and level of the quench tank water, and was so severe that, if the trend continued, plant shut down would be necessary. Preliminary diagnosis based on in-plant instrumentation indicated that any one of 11 valves might be leaking into the quench tank. This paper describes the joint effort by two teams of engineers--one from Florida Power & Light, the other from Framatome Technologies--to identify the sources of the leak, using the latest technology developed for valve diagnosis.

  17. MANAGEMENT OF CEREBROSPINAL FLUID LEAKAGE FOLLOWING CERVICAL SPINE SURGERY

    Institute of Scientific and Technical Information of China (English)

    Ye Tian; Ke-yi Yu; Yi-peng Wang; Jun Qian; Gui-xing Qiu

    2008-01-01

    Objective To investigate the management and outcome of cerebrospinal fluid leakage (CSFL) after cervical surgery. Methods Medical records of 642 patients who underwent cervical surgery between December 1999 and December 2005 at our hospital were retrospectively reviewed. Five patients complicated by CSFL after surgery were enrolled, of which 4 cases were complicated after ossified posterior longitudinal ligament or posterior vertebral osteophyte resection directly injuring the dura, and 1 case after posterior cervical double-door laminoplasty with out observed dural injury during surgery. Of the 5 CSFL cases, 4 cases occurred at 1-3 days after operation and 1 case at 9 days after operation. All 5 postoperative CSFL cases were treated through wound drainage removal, wound sutures, prophylactic antibiotics, and continuous subarachnoid drainage in the elevated head position.Results All 5 CSFL cases experienced leakage cessation within 1-3 days and wound healing within 4-8 days, and subarachnoid drainage lasted 11-16 days with an average volume of 320 mL (range, 150-410 mL). Four cases experienced headache, nausea and vomiting, 1 case suffered from somnolence and hyponatremia, and symptoms subsided after symptomatic treatment and intravenous fluid administration. All patients were followed up for an average of 32 months (range, 22-50 months). No occurrence of cerebrospinal fluid cyst or wound infection was observed. CSFL produced no significant negative effects upon neuromuscular function recovery.Conclusion Continuous subarachnoid cavity drainage in combination with elevated head position is a simple and safe non-surgical method in treatment of CSFL following cervical surgery.

  18. Mind the gap - tip leakage vortex in axial turbines

    International Nuclear Information System (INIS)

    The tendency of designing large Kaplan turbines with a continuous increase of output power is bringing to the front the cavitation erosion issue. Due to the flow in the gap between the runner and the discharge ring, axial turbine blades may develop the so called tip leakage vortex (TLV) cavitation with negative consequences. Such vortices may interact strongly with the wake of guide vanes leading to their multiple collapses and rebounds. If the vortex trajectory remains close to the blade tip, these collapses may lead to severe erosion. One is still unable today to predict its occurrence and development in axial turbines with acceptable accuracy. Numerical flow simulations as well as the actual scale-up rules from small to large scales are unreliable. The present work addresses this problematic in a simplified case study representing TLV cavitation to better understand its sensitivity to the gap width. A Naca0009 hydrofoil is used as a generic blade in the test section of EPFL cavitation tunnel. A sliding mounting support allowing an adjustable gap between the blade tip and wall was manufactured. The vortex trajectory is visualized with a high speed camera and appropriate lighting. The three dimensional velocity field induced by the TLV is investigated using stereo particle image velocimetry. We have taken into account the vortex wandering in the image processing to obtain accurate measurements of the vortex properties. The measurements were performed in three planes located downstream of the hydrofoil for different values of the flow velocity, the incidence angle and the gap width. The results clearly reveal a strong influence of the gap width on both trajectory and intensity of the tip leakage vortex

  19. DISTURBANCE OF THE CARDIOMYOCYTE’S MACROMOLECULAR STRUCTURE IN HEART ALLOGRAFTS AS A SIGN OF CHRONIC REJECTION

    Directory of Open Access Journals (Sweden)

    A. G. Kupriyanova

    2012-01-01

    Full Text Available Chronic rejection, especially cardiac allograft vasculopathy, is a major limiting factor for long-term transplant survival. This process affects not only the blood vessels, but also cardiomyocytes. However, there are extremely few reports on the evaluation of their macromolecular structure state. The aim of the study was to evaluate the structural proteins of cardiomyocytes (actin, myosin, troponin I, titin, desmin, vinculin of heart allografts in different periods after the operation (from 6 days to 15 years. Major changes of macromolecular structure were revealed in late period after transplantation (6 months – 15 years. The contribution of humoral immune response in the process of chronic cardiac allograft rejection was observed: in eight of twelve recipients episodes of acute humoral rejection had been repeatedly registered; disorders of the expression of 5 proteins out of 6 characterized were found in recipients with recurrent and persistent antibody-mediated rejection. 

  20. Regulatory analysis for the resolution of generic issue C---8, main steam isolation valve leakage and LCS [leakage control system] failure

    International Nuclear Information System (INIS)

    Generic Issue C-8 deals with staff concerns about public risk because of the incidence of leak test failures reported for main steam isolation valves (MSIVs) at boiling water reactors and the limitations of the leakage control systems (LCSs) for mitigating the consequences of leakage from these valves. If the MSIV leakage is greatly in excess of the allowable value in the technical specifications, the LCS would be unavailable because of design limitations. The issue was initiated in 1983 to assess (1) the causes of MSIV leakage failures, (2) the effectiveness of the LCS and alternative mitigation paths, and (3) the need for additional regulatory action to reduce public risk. This report presents the regulatory analysis for Generic Issue C-8 and concludes that no new regulatory requirements are warranted

  1. ‘Broken symmetries’ in macromolecular crystallography: phasing from unmerged data

    International Nuclear Information System (INIS)

    Site-specific radiation damage and anisotropy of anomalous scattering can induce intensity differences in symmetry-related reflections. If the data are kept unmerged, these symmetry-breaking effects can become a source of phase information. The space-group symmetry of a crystal structure imposes a point-group symmetry on its diffraction pattern, giving rise to so-called symmetry-equivalent reflections. Instances in macromolecular crystallography are discussed in which the symmetry in reciprocal space is broken, i.e. where symmetry-related reflections are no longer equivalent. Such a situation occurs when the sample suffers from site-specific radiation damage during the X-ray measurements. Another example of broken symmetry arises from the polarization anisotropy of anomalous scattering. In these cases, the genuine intensity differences between symmetry-related reflections can be exploited to yield phase information in the structure-solution process. In this approach, the usual separation of the data merging and phasing steps is abandoned. The data are kept unmerged down to the Harker construction, where the symmetry-breaking effects are explicitly modelled and refined and become a source of supplementary phase information

  2. Olfactory nerve transport of macromolecular drugs to the brain. A problem in olfactory impaired patients

    International Nuclear Information System (INIS)

    Nasal administration of macromolecular drugs (including peptides and nanoparticles) has the potential to enable drug delivery system beyond the blood brain barrier (BBB) via olfactory nerve transport. Basic research on drug deliver systems to the brain via nasal administration has been well reported. Insulin-like growth factor-I (IGF-I) is associated with the development and growth of the central nervous system. Clinical application of IGF-I with nasal administration is intended to enable drug delivery to brain through the BBB. Uptake of IGF-I in the olfactory bulb and central nervous system increased according to the dosage of nasally administered IGF-I in normal ICR mice, however IGF-I uptake in the trigeminal nerve remained unchanged. Olfactory nerve transport is important for the delivery of nasally administered IGF-I to the brain in vivo. Because a safe olfactory nerve tracer has not been clinically available, olfactory nerve transport has not been well studied in humans. Nasal thallium-201 (201Tl) administration has been safely used to assess the direct pathway to the brain via the nose in healthy volunteers with a normal olfactory threshold. 201Tl olfactory nerve transport has recently been shown to decrease in patients with hyposmia. The olfactory nerve transport function in patients with olfactory disorders will be determined using 201Tl olfacto-scintigraphy for the exclusion of candidates in a clinical trial to assess the usefulness of nasal administration of IGF-I. (author)

  3. Using support vector machines to improve elemental ion identification in macromolecular crystal structures

    Energy Technology Data Exchange (ETDEWEB)

    Morshed, Nader [University of California, Berkeley, CA 94720 (United States); Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Echols, Nathaniel, E-mail: nechols@lbl.gov [Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Adams, Paul D., E-mail: nechols@lbl.gov [Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); University of California, Berkeley, CA 94720 (United States)

    2015-05-01

    A method to automatically identify possible elemental ions in X-ray crystal structures has been extended to use support vector machine (SVM) classifiers trained on selected structures in the PDB, with significantly improved sensitivity over manually encoded heuristics. In the process of macromolecular model building, crystallographers must examine electron density for isolated atoms and differentiate sites containing structured solvent molecules from those containing elemental ions. This task requires specific knowledge of metal-binding chemistry and scattering properties and is prone to error. A method has previously been described to identify ions based on manually chosen criteria for a number of elements. Here, the use of support vector machines (SVMs) to automatically classify isolated atoms as either solvent or one of various ions is described. Two data sets of protein crystal structures, one containing manually curated structures deposited with anomalous diffraction data and another with automatically filtered, high-resolution structures, were constructed. On the manually curated data set, an SVM classifier was able to distinguish calcium from manganese, zinc, iron and nickel, as well as all five of these ions from water molecules, with a high degree of accuracy. Additionally, SVMs trained on the automatically curated set of high-resolution structures were able to successfully classify most common elemental ions in an independent validation test set. This method is readily extensible to other elemental ions and can also be used in conjunction with previous methods based on a priori expectations of the chemical environment and X-ray scattering.

  4. The Effect of Attractive Interactions and Macromolecular Crowding on Crystallins Association.

    Directory of Open Access Journals (Sweden)

    Jiachen Wei

    Full Text Available In living systems proteins are typically found in crowded environments where their effective interactions strongly depend on the surrounding medium. Yet, their association and dissociation needs to be robustly controlled in order to enable biological function. Uncontrolled protein aggregation often causes disease. For instance, cataract is caused by the clustering of lens proteins, i.e., crystallins, resulting in enhanced light scattering and impaired vision or blindness. To investigate the molecular origins of cataract formation and to design efficient treatments, a better understanding of crystallin association in macromolecular crowded environment is needed. Here we present a theoretical study of simple coarse grained colloidal models to characterize the general features of how the association equilibrium of proteins depends on the magnitude of intermolecular attraction. By comparing the analytic results to the available experimental data on the osmotic pressure in crystallin solutions, we identify the effective parameters regimes applicable to crystallins. Moreover, the combination of two models allows us to predict that the number of binding sites on crystallin is small, i.e. one to three per protein, which is different from previous estimates. We further observe that the crowding factor is sensitive to the size asymmetry between the reactants and crowding agents, the shape of the protein clusters, and to small variations of intermolecular attraction. Our work may provide general guidelines on how to steer the protein interactions in order to control their association.

  5. Chemical composition and structural features of the macromolecular components of plantation Acacia mangium wood.

    Science.gov (United States)

    Pinto, Paula C; Evtuguin, Dmitry V; Pascoal Neto, Carlos

    2005-10-01

    The wood of Acacia mangium, a prominent fast-growing plantation species used in the pulp-and-paper industry and, so far, poorly investigated for its chemical structure, was submitted to a detailed characterization of its main macromolecular components. Lignin (28% wood weight) isolated by mild acidolysis and characterized by permanganate oxidation, 1H and 13C NMR, and GPC, showed a very low content of syringylpropane-derived units (S:G:H of 48:49:3), a high degree of condensation, a low content of beta-O-4 ( approximately 0.40-0.43 per C6) structures, and a Mw of 2230. Glucuronoxylan (14% wood weight) isolated by alkaline (KOH) or by dimethyl sulfoxide extraction was characterized by methylation analysis, 1H NMR, and GPC. About 10% of the xylopyranose (Xylp) units constituting the linear backbone were substituted at O-2 with 4-O-methylglucuronic acid residues. Almost half of the Xylp units (45%) were O-2 (18%), O-3 (24%) or O-2,3 (3%) acetylated. X-ray diffraction analysis of cellulose (46% wood weight), isolated according to the Kürschner-Hoffer method, showed a degree of crystallinity of 67.6%. PMID:16190642

  6. MRI macromolecular contrast agents as indicators of changed tumor blood flow

    International Nuclear Information System (INIS)

    Background. A rapid mapping technique derived from dynamic contrast enhanced MRI data was used to identify and characterize reduction of blood flow in fibrosarcoma SA-1 tumors treated either by application of electric pulses or vinblastine. Materials and methods. Tissue permeability surface area product (PS) and fractional blood volume (BV) were calculated on a pixel-by-pixel basis using dynamic MRI intensity data after administration of gadomer- 17 or polylysine-Gd-DTPA; prototypic macromolecular contrast agents designed for blood pool enhancement. PS and BV values of untreated tumors were compared to those of tumors treated by local application of 8 electric pulses (amplitude/distance ratio, 1300 V/cm; duration, 100 μs, frequency, 1 Hz) percutaneously to the tumor or by systemic administration of vinblastine (2.5 mg/kg). Results. Both treatments transiently, but significantly reduced tumor blood flow, application of electric pulses to the tumors being by 40% more effective in reducing tumor blood flow than systemic administration of vinblastine. PS and BV values derived with polylysine-Gd-DTPA-enhanced MRI were lower compared to those with gadomer-17, due to larger molecular size. Interestingly, Gd-DTPA-enhanced MRI did not show any significant changes of PS and BV between untreated and treated tumors. Conclusion. This study demonstrates that dynamic contrast enhanced MRI can be effectively used to qualitatively monitor tumor blood flow, and quantitatively by means of BV and PS. (author)

  7. Temperature sensitivity of soil microbial communities: An application of macromolecular rate theory to microbial respiration

    Science.gov (United States)

    Alster, Charlotte J.; Koyama, Akihiro; Johnson, Nels G.; Wallenstein, Matthew D.; Fischer, Joseph C.

    2016-06-01

    There is compelling evidence that microbial communities vary widely in their temperature sensitivity and may adapt to warming through time. To date, this sensitivity has been largely characterized using a range of models relying on versions of the Arrhenius equation, which predicts an exponential increase in reaction rate with temperature. However, there is growing evidence from laboratory and field studies that observe nonmonotonic responses of reaction rates to variation in temperature, indicating that Arrhenius is not an appropriate model for quantitatively characterizing temperature sensitivity. Recently, Hobbs et al. (2013) developed macromolecular rate theory (MMRT), which incorporates thermodynamic temperature optima as arising from heat capacity differences between isoenzymes. We applied MMRT to measurements of respiration from soils incubated at different temperatures. These soils were collected from three grassland sites across the U.S. Great Plains and reciprocally transplanted, allowing us to isolate the effects of microbial community type from edaphic factors. We found that microbial community type explained roughly 30% of the variation in the CO2 production rate from the labile C pool but that temperature and soil type were most important in explaining variation in labile and recalcitrant C pool size. For six out of the nine soil × inoculum combinations, MMRT was superior to Arrhenius. The MMRT analysis revealed that microbial communities have distinct heat capacity values and temperature sensitivities sometimes independent of soil type. These results challenge the current paradigm for modeling temperature sensitivity of soil C pools and understanding of microbial enzyme dynamics.

  8. Large area high-resolution CCD-based X-ray detector for macromolecular crystallography

    CERN Document Server

    Pokric, M; Jorden, A R; Cox, M P; Marshall, A; Long, P G; Moon, K; Jerram, P A; Pool, P; Nave, C; Derbyshire, G E; Helliwell, J R

    2002-01-01

    An X-ray detector system for macromolecular crystallography based on a large area charge-coupled device (CCD) sensor has been developed as part of a large research and development programme for advanced X-ray sensor technology, funded by industry and the Particle Physics and Astronomy Research Council (PPARC) in the UK. The prototype detector consists of two large area three-sides buttable charge-coupled devices (CCD 46-62 EEV), where the single CCD area is 55.3 mmx41.5 mm. Overall detector imaging area is easily extendable to 85 mmx110 mm. The detector consists of an optically coupled X-ray sensitive phosphor, skewed fibre-optic studs and CCDs. The crystallographic measurement requirements at synchrotron sources are met through a high spatial resolution (2048x1536 pixel array), high dynamic range (approx 10 sup 5), a fast readout (approx 1 s), low noise (<10e sup -) and much reduced parallax error. Additionally, the prototype detector system has been optimised by increasing its efficiency at low X-ray ene...

  9. Polarizable atomic multipole X-ray refinement: weighting schemes for macromolecular diffraction.

    Science.gov (United States)

    Fenn, T D; Schnieders, M J

    2011-11-01

    In the past, weighting between the sum of chemical and data-based targets in macromolecular crystallographic refinement was based on comparing the gradients or Hessian diagonal terms of the two potential functions. Here, limitations of this scheme are demonstrated, especially in the context of a maximum-likelihood target that is inherently weighted by the model and data errors. In fact, the congruence between the maximum-likelihood target and a chemical potential based on polarizable atomic multipole electrostatics evaluated with Ewald summation has opened the door to a transferable static weight. An optimal static weight is derived from first principles and is demonstrated to be transferable across a broad range of data resolutions in the context of a recent implementation of X-ray crystallographic refinement using the polarizable AMOEBA force field and it is shown that the resulting models are balanced with respect to optimizing both R(free) and MolProbity scores. Conversely, the classical automatic weighting scheme is shown to lead to underfitting or overfitting of the data and poor model geometry. The benefits of this approach for low-resolution diffraction data, where the need for prior chemical information is of particular importance, are also highlighted. It is demonstrated that this method is transferable between low- and high-resolution maximum-likelihood-based crystallographic refinement, which proves for the first time that resolution-dependent parameterization of either the weight or the chemical potential is unnecessary. PMID:22101822

  10. RoboDiff: combining a sample changer and goniometer for highly automated macromolecular crystallography experiments

    Science.gov (United States)

    Nurizzo, Didier; Bowler, Matthew W.; Caserotto, Hugo; Dobias, Fabien; Giraud, Thierry; Surr, John; Guichard, Nicolas; Papp, Gergely; Guijarro, Matias; Mueller-Dieckmann, Christoph; Flot, David; McSweeney, Sean; Cipriani, Florent; Theveneau, Pascal; Leonard, Gordon A.

    2016-01-01

    Automation of the mounting of cryocooled samples is now a feature of the majority of beamlines dedicated to macromolecular crystallography (MX). Robotic sample changers have been developed over many years, with the latest designs increasing capacity, reliability and speed. Here, the development of a new sample changer deployed at the ESRF beamline MASSIF-1 (ID30A-1), based on an industrial six-axis robot, is described. The device, named RoboDiff, includes a high-capacity dewar, acts as both a sample changer and a high-accuracy goniometer, and has been designed for completely unattended sample mounting and diffraction data collection. This aim has been achieved using a high level of diagnostics at all steps of the process from mounting and characterization to data collection. The RoboDiff has been in service on the fully automated endstation MASSIF-1 at the ESRF since September 2014 and, at the time of writing, has processed more than 20 000 samples completely automatically. PMID:27487827

  11. SPring-8 BL41XU, a high-flux macromolecular crystallography beamline

    Energy Technology Data Exchange (ETDEWEB)

    Hasegawa, Kazuya [SPring-8/JASRI, 1-1-1 Kouto, Sayo, Hyogo 679-5198 (Japan); Shimizu, Nobutaka [SPring-8/JASRI, 1-1-1 Kouto, Sayo, Hyogo 679-5198 (Japan); KEK-PF, 1-1 Oho, Tsukuba, Ibaraki 305-0801 (Japan); Okumura, Hideo; Mizuno, Nobuhiro; Baba, Seiki [SPring-8/JASRI, 1-1-1 Kouto, Sayo, Hyogo 679-5198 (Japan); Hirata, Kunio [RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148 (Japan); Takeuchi, Tomoyuki; Yamazaki, Hiroshi; Senba, Yasunori; Ohashi, Haruhiko [SPring-8/JASRI, 1-1-1 Kouto, Sayo, Hyogo 679-5198 (Japan); Yamamoto, Masaki [RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148 (Japan); Kumasaka, Takashi, E-mail: kumasaka@spring8.or.jp [SPring-8/JASRI, 1-1-1 Kouto, Sayo, Hyogo 679-5198 (Japan)

    2013-11-01

    SPring-8 BL41XU provides a high-flux X-ray beam of size 10–50 µm, and enables high-quality diffraction data to be obtained from various types of protein crystals. Details of this beamline and an upgrade project are described. SPring-8 BL41XU is a high-flux macromolecular crystallography beamline using an in-vacuum undulator as a light source. The X-rays are monochromated by a liquid-nitrogen-cooling Si double-crystal monochromator, and focused by Kirkpatrick–Baez mirror optics. The focused beam size at the sample is 80 µm (H) × 22 µm (V) with a photon flux of 1.1 × 10{sup 13} photons s{sup −1}. A pinhole aperture is used to collimate the beam in the range 10–50 µm. This high-flux beam with variable size provides opportunities not only for micro-crystallography but also for data collection effectively making use of crystal volume. The beamline also provides high-energy X-rays covering 20.6–35.4 keV which allows ultra-high-resolution data to be obtained and anomalous diffraction using the K-edge of Xe and I. Upgrade of BL41XU for more rapid and accurate data collection is proceeding. Here, details of BL41XU are given and an outline of the upgrade project is documented.

  12. Automatic processing of macromolecular crystallography X-ray diffraction data at the ESRF.

    Science.gov (United States)

    Monaco, Stéphanie; Gordon, Elspeth; Bowler, Matthew W; Delagenière, Solange; Guijarro, Matias; Spruce, Darren; Svensson, Olof; McSweeney, Sean M; McCarthy, Andrew A; Leonard, Gordon; Nanao, Max H

    2013-06-01

    The development of automated high-intensity macromolecular crystallography (MX) beamlines at synchrotron facilities has resulted in a remarkable increase in sample throughput. Developments in X-ray detector technology now mean that complete X-ray diffraction datasets can be collected in less than one minute. Such high-speed collection, and the volumes of data that it produces, often make it difficult for even the most experienced users to cope with the deluge. However, the careful reduction of data during experimental sessions is often necessary for the success of a particular project or as an aid in decision making for subsequent experiments. Automated data reduction pipelines provide a fast and reliable alternative to user-initiated processing at the beamline. In order to provide such a pipeline for the MX user community of the European Synchrotron Radiation Facility (ESRF), a system for the rapid automatic processing of MX diffraction data from single and multiple positions on a single or multiple crystals has been developed. Standard integration and data analysis programs have been incorporated into the ESRF data collection, storage and computing environment, with the final results stored and displayed in an intuitive manner in the ISPyB (information system for protein crystallography beamlines) database, from which they are also available for download. In some cases, experimental phase information can be automatically determined from the processed data. Here, the system is described in detail. PMID:23682196

  13. RoboDiff: combining a sample changer and goniometer for highly automated macromolecular crystallography experiments.

    Science.gov (United States)

    Nurizzo, Didier; Bowler, Matthew W; Caserotto, Hugo; Dobias, Fabien; Giraud, Thierry; Surr, John; Guichard, Nicolas; Papp, Gergely; Guijarro, Matias; Mueller-Dieckmann, Christoph; Flot, David; McSweeney, Sean; Cipriani, Florent; Theveneau, Pascal; Leonard, Gordon A

    2016-08-01

    Automation of the mounting of cryocooled samples is now a feature of the majority of beamlines dedicated to macromolecular crystallography (MX). Robotic sample changers have been developed over many years, with the latest designs increasing capacity, reliability and speed. Here, the development of a new sample changer deployed at the ESRF beamline MASSIF-1 (ID30A-1), based on an industrial six-axis robot, is described. The device, named RoboDiff, includes a high-capacity dewar, acts as both a sample changer and a high-accuracy goniometer, and has been designed for completely unattended sample mounting and diffraction data collection. This aim has been achieved using a high level of diagnostics at all steps of the process from mounting and characterization to data collection. The RoboDiff has been in service on the fully automated endstation MASSIF-1 at the ESRF since September 2014 and, at the time of writing, has processed more than 20 000 samples completely automatically. PMID:27487827

  14. Effects of sound exposure on the growth and intracellular macromolecular synthesis of E. coli k-12.

    Science.gov (United States)

    Gu, Shaobin; Zhang, Yongzhu; Wu, Ying

    2016-01-01

    Microbes, as one of the primary producers of the biosphere, play an important role in ecosystems. Exploring the mechanism of adaptation and resistance of microbial population to various environmental factors has come into focus in the fields of modern microbial ecology and molecular ecology. However, facing the increasingly serious problem of acoustic pollution, very few efforts have been put forth into studying the relation of single cell organisms and sound field exposure. Herein, we studied the biological effects of sound exposure on the growth of E. coli K-12 with different acoustic parameters. The effects of sound exposure on the intracellular macromolecular synthesis and cellular morphology of E. coli K-12 were also analyzed and discussed. Experimental results indicated that E. coli K-12 exposed to sound waves owned a higher biomass and a faster specific growth rate compared to the control group. Also, the average length of E. coli K-12 cells increased more than 27.26%. The maximum biomass and maximum specific growth rate of the stimulation group by 8000 Hz, 80dB sound wave was about 1.7 times and 2.5 times that of the control group, respectively. Moreover, it was observed that E. coli K-12 can respond rapidly to sound stress at both the transcriptional and posttranscriptional levels by promoting the synthesis of intracellular RNA and total protein. Some potential mechanisms may be involved in the responses of bacterial cells to sound stress. PMID:27077011

  15. Native gel analysis of macromolecular protein complexes in cultured mammalian cells.

    Science.gov (United States)

    Munawar, Nayla; Olivero, Giorgio; Jerman, Emilia; Doyle, Benjamin; Streubel, Gundula; Wynne, Kieran; Bracken, Adrian; Cagney, Gerard

    2015-11-01

    Native gel electrophoresis enables separation of cellular proteins in their non-denatured state. In experiments aimed at analysing proteins in higher order or multimeric assemblies (i.e. protein complexes) it offers some advantages over rival approaches, particularly as an interface technology with mass spectrometry. Here we separated fractions from HEK293 cells by native electrophoresis in order to survey protein complexes in the cytoplasmic, nuclear and chromatin environments, finding 689 proteins distributed among 217 previously described complexes. As expected, different fractions contained distinct combinations of macromolecular complexes, with subunits of the same complex tending to co-migrate. Exceptions to this observation could often be explained by the presence of subunits shared among different complexes. We investigated one identified complex, the Polycomb Repressor Complex 2 (PRC2), in more detail following affinity purification of the EZH2 subunit. This approach resulted in the identification of all previously reported members of PRC2. Overall, this work demonstrates that the use of native gel electrophoresis as an upstream separating step is an effective approach for analysis of the components and cellular distribution of protein complexes. PMID:26223664

  16. Characterization of PEG-Like Macromolecular Coatings on Plasma Modified NiTi Alloy

    International Nuclear Information System (INIS)

    A poly (ethylene glycol) (PEG-like) coating was developed to improve the biocompatibility of Nickel-Titanium (NiTi) alloy implants. The PEG-like macromolecular coatings were deposited on NiTi substrates at a room temperature of 298 K through a ECR (electron-cyclotron resonance) cold-plasma enhanced chemical vapor deposition method using tetraglyme (CH3-O-(CH2-CH2-O)4-CH3) as a precursor. A power supply with a frequency of 2.45 GHz was applied to ignite the plasma with Ar(argon) used as the carrier gas. Based on the atomic force microscopy (AFM) studies, a thin smooth coating on NiTi substrates with highly amorphous functional groups on the modified NiTi surfaces were mainly the same accumulated stoichiometric ratio of C and O with PEG. The vitro studies showed that platelet-rich plasma (PRP) adsorption on the modified NiTi alloy surface was significantly reduced. This study indicated that plasma surface modification changes the surface components of NiTi alloy and subsequently improves its biocompatibility.

  17. Characterization of PEG-Like Macromolecular Coatings on Plasma Modified NiTi Alloy

    Science.gov (United States)

    Yang, Jun; Gao, Jiacheng; Chang, Peng; Wang, Jianhua

    2008-04-01

    A poly (ethylene glycol) (PEG-like) coating was developed to improve the biocompatibility of Nickel-Titanium (NiTi) alloy implants. The PEG-like macromolecular coatings were deposited on NiTi substrates at a room temperature of 298 K through a ECR (electron-cyclotron resonance) cold-plasma enhanced chemical vapor deposition method using tetraglyme (CH3-O-(CH2-CH2-O)4-CH3) as a precursor. A power supply with a frequency of 2.45 GHz was applied to ignite the plasma with Ar(argon) used as the carrier gas. Based on the atomic force microscopy (AFM) studies, a thin smooth coating on NiTi substrates with highly amorphous functional groups on the modified NiTi surfaces were mainly the same accumulated stoichiometric ratio of C and O with PEG. The vitro studies showed that platelet-rich plasma (PRP) adsorption on the modified NiTi alloy surface was significantly reduced. This study indicated that plasma surface modification changes the surface components of NiTi alloy and subsequently improves its biocompatibility.

  18. About Small Streams and Shiny Rocks: Macromolecular Crystal Growth in Microfluidics

    Science.gov (United States)

    vanderWoerd, Mark; Ferree, Darren; Spearing, Scott; Monaco, Lisa; Molho, Josh; Spaid, Michael; Brasseur, Mike; Curreri, Peter A. (Technical Monitor)

    2002-01-01

    We are developing a novel technique with which we have grown diffraction quality protein crystals in very small volumes, utilizing chip-based, microfluidic ("LabChip") technology. With this technology volumes smaller than achievable with any laboratory pipette can be dispensed with high accuracy. We have performed a feasibility study in which we crystallized several proteins with the aid of a LabChip device. The protein crystals are of excellent quality as shown by X-ray diffraction. The advantages of this new technology include improved accuracy of dispensing for small volumes, complete mixing of solution constituents without bubble formation, highly repeatable recipe and growth condition replication, and easy automation of the method. We have designed a first LabChip device specifically for protein crystallization in batch mode and can reliably dispense and mix from a range of solution constituents. We are currently testing this design. Upon completion additional crystallization techniques, such as vapor diffusion and liquid-liquid diffusion will be accommodated. Macromolecular crystallization using microfluidic technology is envisioned as a fully automated system, which will use the 'tele-science' concept of remote operation and will be developed into a research facility aboard the International Space Station.

  19. Visualization of X-ray Beam Using CdWO4 Crystal for Macromolecular Crystallography

    Directory of Open Access Journals (Sweden)

    Kazimierz J. Gofron

    2011-12-01

    Full Text Available In synchrotron diffraction experiments, it is typically assumed that the X-ray beam at the sample position is uniform, stable and has dimensions that are controlled by the focus and slits settings. As might be expected, this process is much more complex. We present here an investigation of the properties of a synchrotron X-ray beam at the sample position. The X-ray beam is visualized with a single crystal scintillator that converts X-ray photons into visible light photons, which can be imaged using Structure Biology Center (SBC on-axis and off-axis microscope optics. The X-ray penetration is dependent on the composition of the scintillator (especially the effective Z, and X-ray energy. Several scintillators have been used to visualize X-ray beams. Here we compare CdWO4, PbWO4, Bi4Ge3O12, Y3Al5O12:Ce (YAG:Ce, and Gd2O2S:Tb (phosphor. We determined that scintillator crystals made of CdWO4 and similar high-Z materials are best suited for the energy range (7–20 keV and are most suitable for beam visualization for macromolecular crystallography applications. These scintillators show excellent absorption, optical, and mechanical properties.

  20. Multiphoton excitation and photodynamic activity of macromolecular derivatized mTHPC

    Science.gov (United States)

    Schneider, Marc; Graschew, Georgi; Roelofs, Theo A.; Balanos, Evangelos; Rakowsky, Stefan; Sinn, Hanns-joerg; Schlag, Peter M.

    2000-03-01

    Multiphoton excitation of photosensitizers in photodynamic therapy constitutes a promising approach, because of the increasing tissue penetration for longer wavelength of illumination. In this contribution the photodynamic activity of polyethylene glycol macromolecular derivatized mTHPC upon two-photon excitation is established. To test the photo- activity of the photosensitizer, human colon carcinoma cells, HCT-116, were incubated with 2 (mu) g/ml of mTHPC- CMPEG4 in the nutrition medium. Subsequent pulsed laser irradiation at 784 nm focused down on growing cell monolayers restricts cell vitality clearly within 24 hours after irradiation. To investigate whether an anoxic or euoxic energy transfer mechanism is involved, a uric acid assay was performed to test for the generation of singlet oxygen. Upon single-photon excitation mTHPC-CMPEG4 in TriPEG decomposed uric acid via the generation of singlet oxygen. Using femtosecond pulsed laser irradiation no decomposition of the uric acid was found, implying an anoxic energy transfer mechanism after tow-photon excitation. However, at present, we cannot exclude local hyperthermic effects in the cells containing the photosensitizer to contribute to the photodynamic activity upon two-photon excitation.

  1. A facile metal-free "grafting-from" route from acrylamide-based substrate toward complex macromolecular combs

    KAUST Repository

    Zhao, Junpeng

    2013-01-01

    High-molecular-weight poly(N,N-dimethylacrylamide-co-acrylamide) was used as a model functional substrate to investigate phosphazene base (t-BuP 4)-promoted metal-free anionic graft polymerization utilizing primary amide moieties as initiating sites. The (co)polymerization of epoxides was proven to be effective, leading to macromolecular combs with side chains being single- or double-graft homopolymer, block copolymer and statistical copolymer. © 2013 The Royal Society of Chemistry.

  2. DISTURBANCE OF THE CARDIOMYOCYTE’S MACROMOLECULAR STRUCTURE IN HEART ALLOGRAFTS AS A SIGN OF CHRONIC REJECTION

    OpenAIRE

    A. G. Kupriyanova; L. V. Beletskaya; I. M. Ilyinsky; V. A. Zaidenov; N. P. Mozeiko; R. S. Saitgareev; A. Y. Kormer; A. M. Golts; V. M. Zakharevich; S. V. Gautier

    2012-01-01

    Chronic rejection, especially cardiac allograft vasculopathy, is a major limiting factor for long-term transplant survival. This process affects not only the blood vessels, but also cardiomyocytes. However, there are extremely few reports on the evaluation of their macromolecular structure state. The aim of the study was to evaluate the structural proteins of cardiomyocytes (actin, myosin, troponin I, titin, desmin, vinculin) of heart allografts in different periods after the operation (from ...

  3. The influence of hyaluronic acid hydrogel crosslinking density and macromolecular diffusivity on human MSC chondrogenesis and hypertrophy

    OpenAIRE

    Bian, Liming; Hou, Chieh; Tous, Elena; Rai, Reena; Mauck, Robert L.; Burdick, Jason A.

    2012-01-01

    Hyaluronic acid (HA) hydrogels formed via photocrosslinking provide stable 3D hydrogel environments that support the chondrogenesis of mesenchymal stem cells (MSCs). Crosslinking density has a significant impact on the physical properties of hydrogels, including their mechanical stiffness and macromolecular diffusivity. Variations in the HA hydrogel crosslinking density can be obtained by either changes in the HA macromer concentration (1, 3, or 5% w/v at 15 min exposure) or the extent of rea...

  4. Glycogen-graft-poly(2-alkyl-2-oxazolines) - the new versatile biopolymer-based thermoresponsive macromolecular toolbox

    Czech Academy of Sciences Publication Activity Database

    Pospíšilová, Aneta; Filippov, Sergey K.; Bogomolova, Anna; Turner, S.; Sedláček, Ondřej; Matushkin, Nikolai; Černochová, Zulfiya; Štěpánek, Petr; Hrubý, Martin

    2014-01-01

    Roč. 4, č. 106 (2014), s. 61580-61588. ISSN 2046-2069 R&D Projects: GA ČR GA13-08336S; GA MŠk(CZ) LH14079 Grant ostatní: AV ČR(CZ) M200501201; AV ČR(CZ) ASCR/CONICET 2012CZ006 Institutional support: RVO:61389013 Keywords : glycogen * poly(2-alkyl-2-oxazoline) * hybrid copolymer Subject RIV: CD - Macromolecular Chemistry Impact factor: 3.840, year: 2014

  5. Impaired Macromolecular Protein Pools in Fronto-Striato-Thalamic Circuits in Type 2 Diabetes Revealed by Magnetization Transfer Imaging

    OpenAIRE

    Yang, Shaolin; Ajilore, Olusola; Wu, Minjie; Lamar, Melissa; Kumar, Anand

    2014-01-01

    Previous research has shown that type 2 diabetes mellitus (T2DM) is associated with white matter microstructural changes, cognitive impairment, and decreased resting-state functional connectivity and spontaneous brain activity. This study used magnetization transfer imaging to examine, for the first time, the integrity of macromolecular protein pools in fronto-striato-thalamic circuits and its clinical and cognitive correlates in patients with T2DM. T2DM patients without mood disorders (n = 2...

  6. A novel micropump with fixed-geometry valves and low leakage flow

    Science.gov (United States)

    Hwang, Il-Han; An, Jae-Yong; Ko, Kwang-Hee; Shin, Sang-Mo; Lee, Jong-Hyun

    2007-08-01

    A novel micropump with fixed-geometry valves was designed and tested with a leakage barrier to reduce leakage flow. Conventional micropumps with fixed-geometry valves have achieved net positive fluid flow from different fluid resistances in diffuser/nozzle channels. However, those micropumps are susceptible to leakage flow even at low pressure differences between the inlet and the outlet because the channels remain normally open state when the pumps are not in operation. Therefore, a leakage barrier in the chamber was designed to reduce leakage flow without interfering with the net positive fluid flow of the diffuser/nozzle channels. The diffuser/nozzle channels, the chamber and the leakage barrier were fabricated on the silicon substrate by KOH etching and the silicon substrate was anodically bonded with a Pyrex glass plate. A PZT disk was bonded on the glass plate by epoxy and was actuated to oscillate the glass diaphragm for flow generation. When the micropump is not operating, the leakage barrier removes most of the gap between the glass plate and the bottom of the chamber. It was experimentally confirmed that the leakage barrier reduced the leakage flow by 96% compared to the case of no leakage barrier at a pressure difference of -400 Pa. Moreover, by applying the holding dc voltage to the PZT disk, a smaller gap can be obtained reducing the leakage flow further down to 0.043 µL min-1 at a holding dc voltage of 100 V. The maximum flow rate was 3.9 µL min-1 at a peak-to-peak driving voltage of 150 V at 20 Hz with a maximum back pressure of around 800 Pa. The approximate device size was 18 × 25 mm2.

  7. Influence of Obesity on Anastomotic Leakage After Anterior Rectal Resectionperformed Due to Cancer

    Directory of Open Access Journals (Sweden)

    Piecuch Jerzy

    2015-03-01

    Full Text Available Anterior resection for rectal cancer carries the risk of serious complications, especially fistulas at the site of anastomosis. Numerous factors have been shown to impact anastomotic leakage. The results of studies on the influence of obesity on the frequency of anastomotic leakage after rectal resection performed due to cancer have been contradictory.

  8. Particle size-dependent leakage and losses of aerosols in respirators

    Energy Technology Data Exchange (ETDEWEB)

    Holton, P.M.; Tackett, D.L.; Willeke, K.

    1987-10-01

    Measuring particle size-dependent leakage into and losses inside a respirator reveals the deposition mechanisms occurring at the leak site and the flow dynamics inside the respirator. This study investigated particle size-dependent leakage and deposition within the mask by examining the leakage into the mask for different hole locations, probe locations, hole shapes, hole lengths and hole sizes. The shape of the leak has an effect on particle size-dependent leakage. Probe and leak location tests indicated that not only does the total measured leakage change but also the size-dependence of the leakage changes depending on the leak and probe locations. When the leak site is in the chin area, the clean air entering through the filters at the chin helps to carry the inward leakage into the breathing zone. Particle size-dependent leakage does occur and is due to both inertial entry losses at the leak site and within the mask, and diffusional losses within the mask and leak site. Particle size-dependent curves change shape as the hole size changes with relatively more larger particles entering through the small hole size.

  9. Leakage Characteristics of Dual-Cannula Fenestrated Tracheostomy Tubes during Positive Pressure Ventilation: A Bench Study.

    Science.gov (United States)

    Berlet, Thomas; Marchon, Mathias

    2016-01-01

    This study compared the leakage characteristics of different types of dual-cannula fenestrated tracheostomy tubes during positive pressure ventilation. Fenestrated Portex® Blue Line Ultra®, TRACOE® twist, or Rüsch® Traceofix® tracheostomy tubes equipped with nonfenestrated inner cannulas were tested in a tracheostomy-lung simulator. Transfenestration pressures and transfenestration leakage rates were measured during positive pressure ventilation. The impact of different ventilation modes, airway pressures, temperatures, and simulated static lung compliance settings on leakage characteristics was assessed. We observed substantial differences in transfenestration pressures and transfenestration leakage rates. The leakage rates of the best performing tubes were volume. At body temperature, the leakage rates of these tracheostomy tubes were tracheal tube design was the main factor that determined the leakage characteristics. Careful tracheostomy tube selection permits the use of fenestrated tracheostomy tubes in patients receiving positive pressure ventilation immediately after stoma formation and minimises the risk of complications caused by transfenestration gas leakage, for example, subcutaneous emphysema. PMID:27073395

  10. Domino logic designs for high-performance and leakage-tolerant applications

    DEFF Research Database (Denmark)

    Moradi, Farshad; Vu Cao, Tuan; Vatajelu, Elena Ioana;

    2013-01-01

    Robustness of high fan-in domino circuits is degraded by technology scaling due to exponential increase in leakage. In this paper, we propose several domino logic circuit techniques to improve the robustness and performance along with leakage power. Lower total power consumption is achieved by ut...

  11. Estimating the environmental and resource costs of leakage in water distribution systems: A shadow price approach.

    Science.gov (United States)

    Molinos-Senante, María; Mocholí-Arce, Manuel; Sala-Garrido, Ramon

    2016-10-15

    Water scarcity is one of the main problems faced by many regions in the XXIst century. In this context, the need to reduce leakages from water distribution systems has gained almost universal acceptance. The concept of sustainable economic level of leakage (SELL) has been proposed to internalize the environmental and resource costs within economic level of leakage calculations. However, because these costs are not set by the market, they have not often been calculated. In this paper, the directional-distance function was used to estimate the shadow price of leakages as a proxy of their environmental and resource costs. This is a pioneering approach to the economic valuation of leakage externalities. An empirical application was carried out for the main Chilean water companies. The estimated results indicated that for 2014, the average shadow price of leakages was approximately 32% of the price of the water delivered. Moreover, as a sensitivity analysis, the shadow prices of the leakages were calculated from the perspective of the water companies' managers and the regulator. The methodology and findings of this study are essential for supporting the decision process of reducing leakage, contributing to the improvement of economic, social and environmental efficiency and sustainability of urban water supplies. PMID:27289397

  12. Uncertainty Analysis for Assessing Leakage Through Water Tunnels: A Case from Nepal Himalaya

    Science.gov (United States)

    Panthi, Krishna Kanta; Nilsen, Bjørn

    2010-09-01

    Water leakage problems in unlined or shotcrete lined water tunnels are not new issues. In many occasions severe water leakage problems have been faced that not only have reduced the stability of the rock mass, but also have caused valuable water to be lost from it, causing safety risk as well as huge economic loss to the projects. Hence, making tunnels water tight plays an important role in improving stability and safety of underground excavations. The real challenge is however accurate prediction and quantification of possible water leakage, so that cost consequences can be incorporated during planning of a water conveying tunnel project. The main purposes of this paper are to analyze extensive data on leakage test carried out through exploratory drillhole used to define the need for pre-injection grouting of Khimti headrace tunnel and to carry out probabilistic approach of uncertainty analysis based on relationship established between leakage, hydrostatic head and selected Q-value parameters. The authors believe that the new approach regarding uncertainty analysis of leakage presented in this paper will improve the understanding of leakage characteristics of the rock mass, and hope this will lead to a better understanding concerning quantification of possible water leakage from unlined and shotcrete lined water tunnels.

  13. Developments in Impeller/Seal Secondary Flow Path Modeling for Dynamic Force Coefficients and Leakage

    Science.gov (United States)

    Palazzolo, Alan; Bhattacharya, Avijit; Athavale, Mahesh; Venkataraman, Balaji; Ryan, Steve; Funston, Kerry

    1997-01-01

    This paper highlights bulk flow and CFD-based models prepared to calculate force and leakage properties for seals and shrouded impeller leakage paths. The bulk flow approach uses a Hir's based friction model and the CFD approach solves the Navier Stoke's (NS) equation with a finite whirl orbit or via analytical perturbation. The results show good agreement in most instances with available benchmarks.

  14. Physical investigation into the significance of ground conditions on dynamic leakage behaviour

    OpenAIRE

    Fox, S.; Collins, R; Boxall, J

    2016-01-01

    Effective leakage models are crucial for leakage assessment and control strategies to improve the sustainability of vital water distribution, and other pipeline, infrastructure. This paper evaluates the interdependence of leak hydraulics, structural dynamics and soil hydraulics, particularly considering the significance of the soil conditions external to longitudinal slits in viscoelastic pipe. Initial numerical exploration and unique physical experimental results are presented ex...

  15. Design of leakage test apparatus of FPM capsule in Multi Purpose Reactor G.A. Siwabessy

    International Nuclear Information System (INIS)

    To protect the leakage even of the irradiation FPM capsule before irradiated, some examination which can assured the capsule in good condition is needed. Once of the useful examination method is pressure submerged testing method. In order that the leakage examination by this method can be done, the design of leakage test apparatus of FPM capsule in Centre For Development of Research Reactor Technology has been done. By the design propose, the capsule condition can be assure without leakage and ready to irradiated. By the calculation and analysis performed, the design of Leakage Test apparatus of FPM capsule proposed was capable to resist of the stresses during operation. For realizing the design, of a units of Leakage test apparatus of FPM capsule needs a piece SS 304 pipe sch 40 by 6 inch in diameter, a unit of regulator completed with pressure gage, 3 pieces of SS 304 plate by 300 x 300 x 10 mm in dimension. By the leakage test apparatus of FPM capsule design, irradiation processes of FPM capsule can be done without worrying of capsule leakage ensure

  16. Polarization leakage in epoch of reionization windows -- II. Primary beam model and direction dependent calibration

    CERN Document Server

    Asad, K M B; Jelić, V; Ghosh, A; Brentjens, M A; de Bruyn, A G; Ciardi, B; Iliev, I T; Mevius, M; Pandey, V N; Yatawatta, S; Zaroubi, S

    2016-01-01

    Leakage of diffuse polarized emission into Stokes I caused by the polarized primary beam of the instrument might mimic the spectral structure of the 21-cm signal coming from the epoch of reionization (EoR) making their separation difficult. Therefore, understanding polarimetric performance of the antenna is crucial for a successful detection of the EoR signal. Here, we have calculated the accuracy of the nominal model beam of LOFAR in predicting the leakage from Stokes I to Q, U by comparing them with the corresponding leakage of compact sources actually observed in the 3C295 field. We have found that the model beam has errors of less than or equal to 10% on the predicted levels of leakage of ~1%, i. e. if the leakage is taken out perfectly using this model the leakage will reduce to $10^{-3}$ of the Stokes I flux. If similar levels of accuracy can be obtained in removing leakage from Stokes Q, U to I, we can say, based on the results of our previous paper, that the removal of this leakage using this beam mod...

  17. Neutron leakage from Pb and Bc spherical shells with 14 MeV central neutron source

    International Nuclear Information System (INIS)

    Results of measuring neutron leakage from spherical shells of different thickness, made of Pb and Be with a point neutron source in the sphere centrum are presented. The experiment results are compared to calculations according to different programs using data of various nuclear data libraies. The comparison has shown that all the calculations understate the neutron leakage from Pb assmebly. 9 refs.; 2 tabs

  18. Spontaneous cerebrospinal fluid leakage through fistulas at the clivus repaired with endoscopic endonasal approach

    Directory of Open Access Journals (Sweden)

    Yasuhiko Hayashi

    2015-01-01

    Conclusion: Spontaneous CSF leakage at the clivus is an extremely rare condition. High-resolution CT cisternogram could accurately detect CSF leakage through the clivus. A transnasal endoscopic approach was a useful and reliable method of repairing the fistula at the clivus.

  19. Blood-brain barrier leakage after status epilepticus in rapamycin-treated rats II: Potential mechanisms

    NARCIS (Netherlands)

    E.A. van Vliet; W.M. Otte; W.J. Wadman; E. Aronica; G. Kooij; H.E. de Vries; R.M. Dijkhuizen; J.A. Gorter

    2016-01-01

    OBJECTIVE: Blood-brain barrier (BBB) leakage may play a pro-epileptogenic role after status epilepticus. In the accompanying contrast-enhanced magnetic resonance imaging (CE-MRI) study we showed that the mammalian target of rapamycin (mTOR) inhibitor rapamycin reduced BBB leakage and seizure activit

  20. Blood-brain barrier leakage after status epilepticus in rapamycin-treated rats II : Potential mechanisms

    NARCIS (Netherlands)

    van Vliet, Erwin A; Otte, Wim M; Wadman, Wytse J; Aronica, Eleonora; Kooij, Gijs; de Vries, Helga E; Dijkhuizen, Rick M; Gorter, Jan A

    2016-01-01

    OBJECTIVE: Blood-brain barrier (BBB) leakage may play a pro-epileptogenic role after status epilepticus. In the accompanying contrast-enhanced magnetic resonance imaging (CE-MRI) study we showed that the mammalian target of rapamycin (mTOR) inhibitor rapamycin reduced BBB leakage and seizure activit

  1. Oxygen-tension measurements - The first step towards prevention and early detection of anastomotic leakage

    NARCIS (Netherlands)

    Tanase, D.; French, P.J.; Komen, N.; Kleinrensink, G.J.; Jeekel, J.; Lange, J.F.; Draaijer, A.

    2007-01-01

    Many patients still die every year as a result of anastomotic leakage after surgery. The medical world needs an objective aid to detect leakage during surgery and during the critical recovery period. We propose a miniature measurement system to detect adequate tissue oxygenation pre- and postoperati

  2. Leakage Current Optimization Techniques During Test Based on Don't Care Bits Assignment

    Institute of Scientific and Technical Information of China (English)

    Wei Wang; Yu Hu; Yin-He Han; Xiao-Wei Li; You-Sheng Zhang

    2007-01-01

    It is a well-known fact that test power consumption may exceed that during functional operation. Leakage power dissipation caused by leakage current in Complementary Metal-Oxide-Semiconductor (CMOS) circuits during test has become a significant part of the total power dissipation. Hence, it is important to reduce leakage power to prolong battery life in portable systems which employ periodic self-test, to increase test reliability and to reduce test cost. This paper analyzes leakage current and presents a kind of leakage current simulator based on the transistor stacking effect.Using it, we propose techniques based on don't care bits (denoted by Xs) in test vectors to optimize leakage current in integrated circuit (IC) test by genetic algorithm. The techniques identify a set of don't care inputs in given test vectors and reassign specified logic values to the X inputs by the genetic algorithm to get minimum leakage vector (MLV).Experimental results indicate that the techniques can effectually optimize leakage current of combinational circuits and sequential circuits during test while maintaining high fault coverage.

  3. An improved strategy to detect CO2 leakage for verification ofgeologic carbon sequestration

    Energy Technology Data Exchange (ETDEWEB)

    Lewicki, Jennifer L.; Hilley, George E.; Oldenburg, Curtis M.

    2006-05-11

    To detect and quantify subtle surface CO2 leakage signals, we present a strategy that combines measurements of CO2 fluxes or concentrations in the near-surface environment with an algorithm that enhances temporally- and spatially-correlated leakage signals while suppressing random background noise. The algorithm consists of a filter that highlights spatial coherence in the leakage signal, and temporal stacking (averaging) that reduces noise from temporally uncorrelated background fluxes/concentrations. We assess the performance of our strategy using synthetic data sets in which the surface leakage signal is either specified directly or calculated using flow and transport simulations of leakage source geometries one might expect to be present at sequestration sites. We estimate the number of measurements required to detect a potential CO2 leakage signal of given magnitude and area. Results show that given a rigorous field-sampling program, subtle CO2 leakage may be detected using the algorithm; however, leakage of very limited spatial extent or exceedingly small magnitude may be difficult to detect with a reasonable set of monitoring resources.

  4. Investigation of and Components of the Magnetic Flux Leakage in Ferromagnetic Laminated Sample

    Directory of Open Access Journals (Sweden)

    Mustafa Göktepe

    2013-01-01

    Full Text Available The magnetic flux leakage (MFL technique is most commonly used for crack detection from iron bars, laminated sheets, and steel tubes of ferromagnetic nature. Magnetic flux leakage system induces a magnetic field and detects magnetic flux lines that “leak” or change because of a discontinuity in the magnetized area. An inductive coil sensor or a Hall effect sensor detects the leakage. Magnetic methods of nondestructive testing (NDT depend on detecting this magnetic flux leakage field. The ferromagnetic specimen is magnetized by suitable methods, and flaws which break the surface or just the subsurface distort the magnetic field, causing local flux leakage fields. It is very important for industrial applications to detect cracks and flaws in metal parts of the steel bridges, power stations, military tools and structures, and so forth. In this study, the inspection of cracks in laminated sheets under longitudinal magnetization will be discussed in detail.

  5. Study on leakage flow characteristics of radial inflow turbines at rotor tip clearance

    Institute of Scientific and Technical Information of China (English)

    DENG QingHua; NIU JiuFang; FENG ZhenPing

    2008-01-01

    Tip clearance leakage flow in a radial inflow turbine rotor for microturbines under the stage environment is investigated using a three-dimensional viscous flow simulation. The results indicate that the scraping flow caused by relative motion between casing and rotor tip, and the pressure difference between pressure side and suction side at rotor tip, play important roles in tip clearance leakage flow. The more the rotor tip speed increases and tip clearance height decreases, the more the scraping effect acta. Though the leakage velocity of tip clearance at midsection and exducer regions changes less when the rotor rotational speed is changing, the distance between passage vortex and rotor suction side varies in evidence. Main leakage flow rate of tip clearance takes place at region of exducer tip and some seal configurations will be quite effective for cutting leakage flow if these configurations are arranged over midsection and exducer of the radial inflow rotor.

  6. Study on leakage flow characteristics of radial inflow turbines at rotor tip clearance

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Tip clearance leakage flow in a radial inflow turbine rotor for microturbines under the stage environment is investigated using a three-dimensional viscous flow simulation. The results indicate that the scraping flow caused by relative motion between casing and rotor tip, and the pressure difference between pressure side and suction side at rotor tip, play important roles in tip clearance leakage flow. The more the rotor tip speed increases and tip clearance height decreases, the more the scraping effect acts. Though the leakage velocity of tip clearance at midsection and exducer regions changes less when the rotor rotational speed is changing, the distance between passage vortex and rotor suction side varies in evidence. Main leakage flow rate of tip clearance takes place at region of exducer tip and some seal configurations will be quite effective for cutting leakage flow if these configurations are arranged over midsection and exducer of the radial inflow rotor.

  7. Gate length dependence of the shallow trench isolation leakage current in an irradiated deep submicron NMOSFET

    Energy Technology Data Exchange (ETDEWEB)

    Liu Zhangli; Hu Zhiyuan; Zhang Zhengxuan; Shao Hua; Chen Ming; Bi Dawei; Ning Bingxu; Zou Shichang, E-mail: liuzhangli@mail.sim.ac.cn [State Key Laboratory of Functional Materials for Informatics, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai 200050 (China)

    2011-06-15

    The effects of gamma irradiation on the shallow trench isolation (STI) leakage currents in a 0.18 {mu}m technology are investigated. NMOSFETs with different gate lengths are irradiated at several dose levels. The threshold voltage shift is negligible in all of the devices due to the very thin oxide thickness. However, an increase in the off-state leakage current is observed for all of the devices. We believe that the leakage is induced by the drain-to-source leakage path along the STI sidewall, which is formed by the positive trapped charge in the STI oxide. Also, we found that the leakage is dependent on the device's gate length. The three-transistor model (one main transistor with two parasitic transistors) can provide us with a brief understanding of the dependence on gate length. (semiconductor devices)

  8. Leakage current and deep levels in CoSi{sub 2} silicided junctions

    Energy Technology Data Exchange (ETDEWEB)

    Codegoni, D. [ST Microelectronics Via Olivetti 2, 20041 Agrate Brianza, Milan (Italy); Carnevale, G.P. [ST Microelectronics Via Olivetti 2, 20041 Agrate Brianza, Milan (Italy); De Marco, C. [ST Microelectronics Via Olivetti 2, 20041 Agrate Brianza, Milan (Italy); Mica, I. [ST Microelectronics Via Olivetti 2, 20041 Agrate Brianza, Milan (Italy); Polignano, M.L. [ST Microelectronics Via Olivetti 2, 20041 Agrate Brianza, Milan (Italy)]. E-mail: marialuisa.polignano@st.com

    2005-12-05

    In this work the leakage current of junctions with a self-aligned cobalt silicide is studied. It is shown that junctions with a self-aligned CoSi{sub 2} layer show a leakage current excess which is strongly reduced by increasing the PAI energy. This indicates that the observed leakage current excess is related to the CoSi{sub 2} formation conditions. The mechanism responsible for the leakage of CoSi{sub 2} junctions is investigated by current versus temperature measurements and by deep level transient spectroscopy. In addition, the role of the mechanical stress is investigated by comparing different isolation structures and by numerical stress calculations. It is concluded that the shallow trench isolation (STI) induced stress and the cobalt silicide formation concur to produce a junction leakage current increase by creating a deep level in silicon located close to midgap. This level can possibly identified with a level ascribed to a point defect excess.

  9. A two-dimensional simulation of plasma leakage due to dengue infection

    Science.gov (United States)

    Nuraini, N.; Windarto, Jayanti, Swarna; Soewono, Edy

    2014-03-01

    Dengue Hemorrhagic Fever (DHF) is a disease caused by Dengue virus infection. One major characteristic in a patient with DHF is the occurrence of plasma leakage. Plasma leakage is a consequence of the immune system mechanism which activates cytokine. As a result, permeability of vascular will increase. Another characteristic in a DHF patient is hypoalbuminea (decreasing of albumin concentration). Plasma leakage can be modelled by constructing mathematical model of albumin concentration in plasma blood due to increasing of cytokine. In this paper, decreasing of albumin concentration in blood plasma is modelled using diffusion equation. In addition, two-dimensional numerical simulations of albumin concentration are also presented. From the simulation, it is found that the greater leakage rate or the wider leakage area, the greater decreasing albumin concentration will be. Furthermore, when time t increases, the albumin concentration decreases to zero.

  10. Characterization of CO2 leakage into the freshwater body

    Science.gov (United States)

    Singh, Ashok; Delfs, Jens-Olaf; Shao, Habing; Kolditz, Olaf

    2013-04-01

    Current research into Carbon dioxide Capture and Storage (CCS) is dominated by improving the CO2 storage capacity. However, potential leakage of CO2 can cause environmental problems, particularly if freshwater resources are nearby. In this regards, it is important to understand the chemistry of CO2 and the water system. CO2 leakage across the fluid interface (CO2 and water) is controlled by the difference in the partial pressure of CO2 in the storage and in the freshwater body. Once the CO2 is in solution, it equilibrates with the bicarbonate and carbonate ions. According to Millero (1994)such a system can be characterized by two parameters out of the four: total alkalinity (TA), total carbonate (TCO2), fugacity of CO2(fCO2) and pH. In the present modeling study, we are interested in the (i) CO2 leakage into a freshwater body (while injecting CO2 for storage) through an inclined fracture and (ii) characterization of the system by measuring fugacity of CO2 and pH. According to work presented by Singh et al. (2012), about 31% of injected CO2 leaks into the freshwater body. Solubility of CO2 in water follows Henry's law, while the Henry constant, K0 is calculated by an empirical relation developed by Murray and Riley (1971), which is a function of salinity and temperature. According to our results, pH and fugacity both appear to be a linear function of temperature. To simulate the discussed problem, a corresponding numerical module has been developed for multi-component fluid flow coupled with heat and mass transport processes. Governing equations and Volume Translated Peng-Robinson equations of state are implemented within the object-oriented finite element code OpenGeoSys (Kolditz et al., 2012; www.opengeosys.org). Primary variables are pressure, temperature and salinity which are obtained by solving the governing equations in a monolithic way The governing equations are discretized spatially within the context of a Galerkin approach, whereas the temporal

  11. CSF Leakage "Radiology, Neuroradiology and Head and Neck, ENT"

    Directory of Open Access Journals (Sweden)

    Jalal Jalal Shokouhi

    2009-01-01

    Full Text Available Introduction: Leak of CSF is a relatively common complication in skull base fractures and it is rarely seen during skull base tumors and pituitary gland pathologies "Adenomas and empty sellae syndrome"."nThe common site of CSF leakage is related to the site of fracture but it is more common in cribriform plate fractures. Other sites are frontal sinus fractures and rarely sphenoid sinus lesions related to pituitary gland site pathology. Evaluation of the cribriform plate and the posterior wall of the frontal sinus is an imaging key point."nOther rare conditions of CSF leak are related to temporal bone fractures leading to otorrhea and in a paradoxical feature with rhinorrhea "intact tympanic membrane with temporal bone fracture and eustachian tube transmission of fluid"."nEthiology "nTrauma and skull base fractures epecially in the cribriform plate."nParanasal sinus fractures specially in the frontal and sphenoidal sinuses."nTemporal bone fractures."nEmpty sellae and intrasellar tumors."nPost-op stage in the skull base tumors."nDiagnosis"nNasal CSF leakage laboratory."nRadioneucleid imaging: This way is sensitive but non-specific."nMethylen blue injection into CSF via lumbar puncture "non-specific" and rarely used."nHigh resolution axial, coronal and sagittal reconstructed images of skull base as a modality of choice"nIn case of positive CSF leak but negative spiral ultra-high resolution CT in PNS, ethmoidal region and cribriform plate also temporal bone cuts we need linear and pleuridirectional X-ray tomography."nIn case of positive CSF leakage and negative radiology and imaging it needs exploration surgery to direct vision of anterior fossa floor bones for fracture."n-Companion complication could be recurrent meningitis."n- No 3D-CT or MRI is necessary for bone fractures but MRI could be"nnecessary for related brain contusion or soft tissue lesions and tumor."nX-ray CT-cisternography"nAlthough more than 90% of fractures could be detected by

  12. The use of workflows in the design and implementation of complex experiments in macromolecular crystallography

    International Nuclear Information System (INIS)

    A powerful and easy-to-use workflow environment has been developed at the ESRF for combining experiment control with online data analysis on synchrotron beamlines. This tool provides the possibility of automating complex experiments without the need for expertise in instrumentation control and programming, but rather by accessing defined beamline services. The automation of beam delivery, sample handling and data analysis, together with increasing photon flux, diminishing focal spot size and the appearance of fast-readout detectors on synchrotron beamlines, have changed the way that many macromolecular crystallography experiments are planned and executed. Screening for the best diffracting crystal, or even the best diffracting part of a selected crystal, has been enabled by the development of microfocus beams, precise goniometers and fast-readout detectors that all require rapid feedback from the initial processing of images in order to be effective. All of these advances require the coupling of data feedback to the experimental control system and depend on immediate online data-analysis results during the experiment. To facilitate this, a Data Analysis WorkBench (DAWB) for the flexible creation of complex automated protocols has been developed. Here, example workflows designed and implemented using DAWB are presented for enhanced multi-step crystal characterizations, experiments involving crystal reorientation with kappa goniometers, crystal-burning experiments for empirically determining the radiation sensitivity of a crystal system and the application of mesh scans to find the best location of a crystal to obtain the highest diffraction quality. Beamline users interact with the prepared workflows through a specific brick within the beamline-control GUI MXCuBE

  13. X-ray detectors for soft X-ray macromolecular crystallography

    International Nuclear Information System (INIS)

    Full text: Modern protein crystallography ultimately makes use of the two-dimensional position - sensitive detectors such as Image Plates and CCD with scintillation convertors coupled with fiber optics for detection of X-Ray diffraction pictures taken from macromolecular crystals. These detectors have high efficiency for 1.5-1.0 A synchrotron radiation, special resolution ∼80-50 μm and large effective area (i.e. Σ 300 mm2 for large MAR Image Plate). Both of these types of detectors lack energy resolution. A major drawback of Image Plates is long read-out time (2.5-4 minutes). CCD based devices permit data collection in a real time, however at present they are much more expensive. One of the novel and very promising trends in protein crystallography is to use soft X-ray synchrotron radiation between 2.2 keV and 6 keV (5.6 to 2.5 A) and there is an urgent need to develop suitable detection system for these kinds of applications. It is to be two- dimensional positional sensitive detector with pitch of about 10 to 20 μm, high efficiency and real-time readout. An active area of the detector is to be at least 20 x 20 mm2. It seems to be the simplest solution to use conventional direct-illumination CCD detectors because absorption length of the 5 A radiation in silicon is about 3 μm. However they lack, for example, energy resolution and optimum solution of the problem has yet to come. (author)

  14. Free kick instead of cross-validation in maximum-likelihood refinement of macromolecular crystal structures

    International Nuclear Information System (INIS)

    The maximum-likelihood free-kick target, which calculates model error estimates from the work set and a randomly displaced model, proved superior in the accuracy and consistency of refinement of crystal structures compared with the maximum-likelihood cross-validation target, which calculates error estimates from the test set and the unperturbed model. The refinement of a molecular model is a computational procedure by which the atomic model is fitted to the diffraction data. The commonly used target in the refinement of macromolecular structures is the maximum-likelihood (ML) function, which relies on the assessment of model errors. The current ML functions rely on cross-validation. They utilize phase-error estimates that are calculated from a small fraction of diffraction data, called the test set, that are not used to fit the model. An approach has been developed that uses the work set to calculate the phase-error estimates in the ML refinement from simulating the model errors via the random displacement of atomic coordinates. It is called ML free-kick refinement as it uses the ML formulation of the target function and is based on the idea of freeing the model from the model bias imposed by the chemical energy restraints used in refinement. This approach for the calculation of error estimates is superior to the cross-validation approach: it reduces the phase error and increases the accuracy of molecular models, is more robust, provides clearer maps and may use a smaller portion of data for the test set for the calculation of Rfree or may leave it out completely

  15. Prospects for simulating macromolecular surfactant chemistry at the ocean–atmosphere boundary

    International Nuclear Information System (INIS)

    Biogenic lipids and polymers are surveyed for their ability to adsorb at the water–air interfaces associated with bubbles, marine microlayers and particles in the overlying boundary layer. Representative ocean biogeochemical regimes are defined in order to estimate local concentrations for the major macromolecular classes. Surfactant equilibria and maximum excess are then derived based on a network of model compounds. Relative local coverage and upward mass transport follow directly, and specific chemical structures can be placed into regional rank order. Lipids and denatured protein-like polymers dominate at the selected locations. The assigned monolayer phase states are variable, whether assessed along bubbles or at the atmospheric spray droplet perimeter. Since oceanic film compositions prove to be irregular, effects on gas and organic transfer are expected to exhibit geographic dependence as well. Moreover, the core arguments extend across the sea–air interface into aerosol–cloud systems. Fundamental nascent chemical properties including mass to carbon ratio and density depend strongly on the geochemical state of source waters. High surface pressures may suppress the Kelvin effect, and marine organic hygroscopicities are almost entirely unconstrained. While bubble adsorption provides a well-known means for transporting lipidic or proteinaceous material into sea spray, the same cannot be said of polysaccharides. Carbohydrates tend to be strongly hydrophilic so that their excess carbon mass is low despite stacked polymeric geometries. Since sugars are abundant in the marine aerosol, gel-based mechanisms may be required to achieve uplift. Uncertainties distill to a global scale dearth of information regarding two dimensional kinetics and equilibria. Nonetheless simulations are recommended, to initiate the process of systems level quantification. (papers)

  16. A novel macromolecular extract screened from satsuma with pro-inflammatory effect.

    Science.gov (United States)

    Yan, Huiqing; Ji, Qun; Chen, Doudou; Wu, Jinlong; Peng, Shu'ang; Ma, Zhaocheng; Deng, Xiuxin

    2014-02-01

    Excessive consumption of horticultural fruit is a double-edged sword with both positive and negative effects. In Eastern countries, a large number of people have suffered from shang huo as a result of excessive consumption of "heating" foods, such as lychee, longan, mandarin orange, mango and civet durian. The present study adopted a step by step strategy screened the compositions with pro-inflammatory effect in satsuma fruits. The pro-inflammatory effects of all fractions were evaluated in RAW 264.7 cell lines by enzyme-linked immunosorbent assay (ELISA) and RT-PCR tests. The soluble water extract (SWE) from satsuma increased the production of prostaglandin E2 (PGE2) and promoted the expression level of cyclooxygenase-2 (COX-2) mRNA. SWE and high molecular weight molecules extracted from soluble water extract (HSWE) were respectively fractionated by dialysis bags and gel filtration chromatography. The macromolecular fraction named F1 was further obtained from HSWE, and could increase the production of inflammatory mediators. Finally F1 was resolved by SDS-PAGE and six proteins were identified by mass spectrometry. Compared with other detected proteins, polygalacturonase inhibitor (PGIP) and chitinase were the most likely candidate pro-inflammatory proteins according to molecular mass, and both of them were Citrus unshiu species. cDNA sequences of PGIP and chitinase were cloned and their functions were predicted as defensive proteins by SMART analysis. Excessive intake of these defensive proteins may result in adverse food reactions in human beings, such as shang huo and other immune responses. PMID:24336758

  17. Novel 3D bio-macromolecular bilinear descriptors for protein science: Predicting protein structural classes.

    Science.gov (United States)

    Marrero-Ponce, Yovani; Contreras-Torres, Ernesto; García-Jacas, César R; Barigye, Stephen J; Cubillán, Néstor; Alvarado, Ysaías J

    2015-06-01

    In the present study, we introduce novel 3D protein descriptors based on the bilinear algebraic form in the ℝ(n) space on the coulombic matrix. For the calculation of these descriptors, macromolecular vectors belonging to ℝ(n) space, whose components represent certain amino acid side-chain properties, were used as weighting schemes. Generalization approaches for the calculation of inter-amino acidic residue spatial distances based on Minkowski metrics are proposed. The simple- and double-stochastic schemes were defined as approaches to normalize the coulombic matrix. The local-fragment indices for both amino acid-types and amino acid-groups are presented in order to permit characterizing fragments of interest in proteins. On the other hand, with the objective of taking into account specific interactions among amino acids in global or local indices, geometric and topological cut-offs are defined. To assess the utility of global and local indices a classification model for the prediction of the major four protein structural classes, was built with the Linear Discriminant Analysis (LDA) technique. The developed LDA-model correctly classifies the 92.6% and 92.7% of the proteins on the training and test sets, respectively. The obtained model showed high values of the generalized square correlation coefficient (GC(2)) on both the training and test series. The statistical parameters derived from the internal and external validation procedures demonstrate the robustness, stability and the high predictive power of the proposed model. The performance of the LDA-model demonstrates the capability of the proposed indices not only to codify relevant biochemical information related to the structural classes of proteins, but also to yield suitable interpretability. It is anticipated that the current method will benefit the prediction of other protein attributes or functions. PMID:25843214

  18. Magnetic Flux Leakage Sensing-Based Steel Cable NDE Technique

    Directory of Open Access Journals (Sweden)

    Seunghee Park

    2014-01-01

    Full Text Available Nondestructive evaluation (NDE of steel cables in long span bridges is necessary to prevent structural failure. Thus, an automated cable monitoring system is proposed that uses a suitable NDE technique and a cable-climbing robot. A magnetic flux leakage- (MFL- based inspection system was applied to monitor the condition of cables. This inspection system measures magnetic flux to detect the local faults (LF of steel cable. To verify the feasibility of the proposed damage detection technique, an 8-channel MFL sensor head prototype was designed and fabricated. A steel cable bunch specimen with several types of damage was fabricated and scanned by the MFL sensor head to measure the magnetic flux density of the specimen. To interpret the condition of the steel cable, magnetic flux signals were used to determine the locations of the flaws and the levels of damage. Measured signals from the damaged specimen were compared with thresholds that were set for objective decision-making. In addition, the measured magnetic flux signals were visualized as a 3D MFL map for intuitive cable monitoring. Finally, the results were compared with information on actual inflicted damages, to confirm the accuracy and effectiveness of the proposed cable monitoring method.

  19. Feasibility study of tank leakage mitigation using subsurface barriers

    International Nuclear Information System (INIS)

    The US Department of Energy (DOE) has established the Tank Waste Remediation System (TWRS) to satisfy manage and dispose of the waste currently stored in the underground storage tanks. The retrieval element of TWRS includes a work scope to develop subsurface impermeable barriers beneath SSTs. The barriers could serve as a means to contain leakage that may result from waste retrieval operations and could also support site closure activities by facilitating cleanup. Three types of subsurface barrier systems have emerged for further consideration: (1) chemical grout, (2) freeze walls, and (3) desiccant, represented in this feasibility study as a circulating air barrier. This report contains analyses of the costs and relative risks associated with combinations retrieval technologies and barrier technologies that from 14 alternatives. Eight of the alternatives include the use of subsurface barriers; the remaining six nonbarrier alternative are included in order to compare the costs, relative risks and other values of retrieval with subsurface barriers. Each alternative includes various combinations of technologies that can impact the risks associated with future contamination of the groundwater beneath the Hanford Site to varying degrees. Other potential risks associated with these alternatives, such as those related to accidents and airborne contamination resulting from retrieval and barrier emplacement operations, are not quantitatively evaluated in this report

  20. Potential acidification impacts on zooplankton in CCS leakage scenarios

    International Nuclear Information System (INIS)

    Highlights: • Effects of CCS techniques and ocean acidification on zooplankton are under-studied. • Vulnerable zooplankton are meso-, bathypelagic and vertically migrating species. • Impacts include impaired calcification, reproduction, development and survival. • Need for modelling studies combining physico-chemical with ecological impacts. -- Abstract: Carbon capture and storage (CCS) technologies involve localized acidification of significant volumes of seawater, inhabited mainly by planktonic species. Knowledge on potential impacts of these techniques on the survival and physiology of zooplankton, and subsequent consequences for ecosystem health in targeted areas, is scarce. The recent literature has a focus on anthropogenic greenhouse gas emissions into the atmosphere, leading to enhanced absorption of CO2 by the oceans and a lowered seawater pH, termed ocean acidification. These studies explore the effects of changes in seawater chemistry, as predicted by climate models for the end of this century, on marine biota. Early studies have used unrealistically severe CO2/pH values in this context, but are relevant for CCS leakage scenarios. Little studied meso- and bathypelagic species of the deep sea may be especially vulnerable, as well as vertically migrating zooplankton, which require significant residence times at great depths as part of their life cycle

  1. Anastomotic leakage after colorectal surgery: diagnostic accuracy of CT

    Energy Technology Data Exchange (ETDEWEB)

    Kauv, Paul; Benadjaoud, Samir; Boulay-Coletta, Isabelle; Zins, Marc [Fondation Hopital Saint-Joseph, Department of Radiology, Paris (France); Curis, Emmanuel [Universite Paris Descartes, Laboratoire de biomathematiques, Faculte de pharmacie, Paris (France); Loriau, Jerome [Fondation Hopital Saint-Joseph, Department of Digestive Surgery, Paris (France)

    2015-12-15

    To evaluate the diagnostic accuracy of CT in postoperative colorectal anastomotic leakage (AL). Two independent blinded radiologists reviewed 153 CTs performed for suspected AL within 60 days after surgery in 131 consecutive patients, with (n = 58) or without (n = 95) retrograde contrast enema (RCE). Results were compared to original interpretations. The reference standard was reoperation or consensus (a radiologist and a surgeon) regarding clinical, laboratory, radiological, and follow-up data after medical treatment. AL was confirmed in 34/131 patients. For the two reviewers and original interpretation, sensitivity of CT was 82 %, 87 %, and 71 %, respectively; specificity was 84 %, 84 %, and 92 %. RCE significantly increased the positive predictive value (from 40 % to 88 %, P = 0.0009; 41 % to 92 %, P = 0.0016; and 40 % to 100 %, P = 0.0006). Contrast extravasation was the most sensitive (reviewers, 83 % and 83 %) and specific (97 % and 97 %) sign and was significantly associated with AL by univariate analysis (P < 0.0001 and P < 0.0001). By multivariate analysis with recursive partitioning, CT with RCE was accurate to confirm or rule out AL with contrast extravasation. CT with RCE is accurate for diagnosing postoperative colorectal AL. Contrast extravasation is the most reliable sign. RCE should be performed during CT for suspected AL. (orig.)

  2. Similarity consideration of the buoyant jet resulting from hydrogen leakage

    Energy Technology Data Exchange (ETDEWEB)

    El-Amin, M.F.; Kanayama, H. [Department of Mechanical Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395 (Japan)

    2009-07-15

    In this paper, the similarity form is developed of a hydrogen-air buoyant jet 'forced plume' resulting from an unignited small-scale hydrogen leakage in the air. As the domain temperature is assumed to be constant and therefore the density of the mixture is a function of the concentration only, the hydrogen-air mixture is assumed to be of a linear mixing type. The rate of entrainment is assumed to be a function of the plume centerline velocity and the ratio of the mean plume and ambient densities. The local rate of entrainment may be considered to be consisted of two components; one is the component of entrainment due to jet momentum while the other is the component of entrainment due to buoyancy. Consequently, the entrainment coefficient is taken as a variable not constant. The density will be considered as a variable in all terms of the equations of continuity, momentum and concentration. The integral models of the mass, momentum and concentration fluxes are obtained. Non-dimensional transformations known as similarity transformations and used to transform the integral model to a set of ordinary differential equations called similarity equations which are solved numerically. Under various values of Froude number, the hydrogen centerline mass fraction, jet width and centerline velocity are introduced and compared with published experimental results for a slow leak vertical hydrogen jet. (author)

  3. Smart integrated containment leakage rate test system using wireless communication

    International Nuclear Information System (INIS)

    Integrated Leakage Rate Test (ILRT) is the important test the confidentiality and integrity of the containment building, which is the last barrier when Design basis accidents (DBA) of Nuclear Power plant occur. Since the result of this test is the basis to guarantee the safety of nuclear power plants, the test process, test procedure, and the test equipment are required to have high reliability. The test devices previously used have been products of VOLUMERTRICS and GRAFTEL of USA. These devices have been inconvenient to calibrate and use. Thus improved devices needed to be developed to remove the inconveniences, to verify the safety of Korean nuclear power plants with Korea's own technology, and to secure core technology. A new leak test system was developed by domestic technology for that purpose and needed to be verified. In this paper, technical details of the newly developed easy to use and highly reliable measuring test device, which is in operation at the nuclear power plant sites, will be introduced. State of art technology was applied to the device to address the shortcomings of previous US made devices and the difficulties to use on site

  4. Structural and leakage integrity assessment of WWER steam generator tubes

    Energy Technology Data Exchange (ETDEWEB)

    Splichal, K.; Otruba, J. [Nuclear Research Inst., Rez (Switzerland)

    1997-12-31

    The integrity of heat exchange tubes may influence the life-time of WWER steam generators and appears to be an important criterion for the evaluation of their safety and operational reliability. The basic requirement is to assure a very low probability of radioactive water leakage, preventing unstable crack growth and sudden tube rupture. These requirements led to development of permissible limits for primary to secondary leak evolution and heat exchange tubes plugging based on eddy current test inspection. The stress corrosion cracking and pitting are the main corrosion damage of WWER heat exchange tubes and are initiated from the outer surface. They are influenced by water chemistry, temperature and tube wall stress level. They take place under crevice corrosion condition and are indicated especially (1) under the tube support plates, where up to 90-95 % of defects detected by the ECT method occur, and (2) on free spans under tube deposit layers. Both the initiation and crack growth cause thinning of the tube wall and lead to part thickness cracks and through-wall cracks, oriented above all in the axial direction. 10 refs.

  5. Chemical composition of the lunar surface from neutron leakage fluxes

    International Nuclear Information System (INIS)

    The neutron leakage fluxes from the lunar surface are calculated by Monte Carlo transport code based on Geant4. The integral fluxes of fast neutrons, epi-thermal neutrons and thermal neutrons are analyzed. Numerical results for 20 kinds of lunar soils and 7 minerals show that the fast neutron fluxes are linearly related to the average atomic mass numbers of the lunar materials used in simulations. Meanwhile, the average atomic mass numbers are strongly modulated by the abundances of iron (Fe) and titanium (Ti), and a linear relationship between the average atomic mass numbers and the abundances of Fe and Ti is found. Furthermore, the results show that the ratios of epi-thermal to thermal fluxes for lunar soils are linearly related to the macroscopic absorption cross sections of lunar materials, and that the macroscopic absorption cross sections monotonically increase with the abundances of Fe and Ti by a simple function. Then we reach the conclusion that the neutron fluxes can provide the information about the Fe and Ti contents. (authors)

  6. Compensation for Booster Leakage Field in the Duke Storage Ring

    CERN Document Server

    Li, Wei; Mikhailov, Stepan F; Popov, Victor; Li, Wei-Min; Wu, Ying K

    2016-01-01

    The High Intensity Gamma-ray Source (HIGS) at Duke University is an accelerator-driven Compton gamma-ray source, providing high flux gamma-ray beam from 1 MeV to 100 MeV for photo-nuclear physics research. The HIGS facility operates three accelerators, a linac pre-injector (0.16 GeV), a booster injector (0.16-1.2 GeV), and an electron storage ring (0.24-1.2 GeV). Because of proximity of the booster injector to the storage ring, the magnetic field of the booster dipoles close to the ring can significantly alter the closed orbit in the storage ring being operated in the low energy region. This type of orbit distortion can be a problem for certain precision experiments which demand a high degree of the energy consistency of the gamma-ray beam. This energy consistency can be achieved by maintaining consistent aiming of the gamma-ray beam, therefore, a steady electron beam orbit and angle at the Compton collision point. To overcome the booster leakage field problem, we have developed an orbit compensation scheme. ...

  7. Degradation of Leakage Currents and Reliability Prediction for Tantalum Capacitors

    Science.gov (United States)

    Teverovsky, Alexander

    2016-01-01

    Two types of failures in solid tantalum capacitors, catastrophic and parametric, and their mechanisms are described. Analysis of voltage and temperature reliability acceleration factors reported in literature shows a wide spread of results and requires more investigation. In this work, leakage currents in two types of chip tantalum capacitors were monitored during highly accelerated life testing (HALT) at different temperatures and voltages. Distributions of degradation rates were approximated using a general log-linear Weibull model and yielded voltage acceleration constants B = 9.8 +/- 0.5 and 5.5. The activation energies were Ea = 1.65 eV and 1.42 eV. The model allows for conservative estimations of times to failure and was validated by long-term life test data. Parametric degradation and failures are reversible and can be annealed at high temperatures. The process is attributed to migration of charged oxygen vacancies that reduce the barrier height at the MnO2/Ta2O5 interface and increase injection of electrons from the MnO2 cathode. Analysis showed that the activation energy of the vacancies' migration is 1.1 eV.

  8. Feasibility study of tank leakage mitigation using subsurface barriers

    Energy Technology Data Exchange (ETDEWEB)

    Treat, R.L.; Peters, B.B.; Cameron, R.J.; McCormak, W.D.; Trenkler, T.; Walters, M.F. [Ensearch Environmental, Inc. (United States); Rouse, J.K.; McLaughlin, T.J. [Bovay Northwest, Inc., Richland, WA (United States); Cruse, J.M. [Westinghouse Hanford Co., Richland, WA (United States)

    1994-09-21

    The US Department of Energy (DOE) has established the Tank Waste Remediation System (TWRS) to satisfy manage and dispose of the waste currently stored in the underground storage tanks. The retrieval element of TWRS includes a work scope to develop subsurface impermeable barriers beneath SSTs. The barriers could serve as a means to contain leakage that may result from waste retrieval operations and could also support site closure activities by facilitating cleanup. Three types of subsurface barrier systems have emerged for further consideration: (1) chemical grout, (2) freeze walls, and (3) desiccant, represented in this feasibility study as a circulating air barrier. This report contains analyses of the costs and relative risks associated with combinations retrieval technologies and barrier technologies that from 14 alternatives. Eight of the alternatives include the use of subsurface barriers; the remaining six nonbarrier alternative are included in order to compare the costs, relative risks and other values of retrieval with subsurface barriers. Each alternative includes various combinations of technologies that can impact the risks associated with future contamination of the groundwater beneath the Hanford Site to varying degrees. Other potential risks associated with these alternatives, such as those related to accidents and airborne contamination resulting from retrieval and barrier emplacement operations, are not quantitatively evaluated in this report.

  9. Evaluation of the effects of enameloplasty and air abrasion on sealant micro-leakage.

    Directory of Open Access Journals (Sweden)

    Aliasghar Soleymani

    2014-12-01

    Full Text Available Micro-leakage, one of the major reasons for recurrent decays, may lead to uncontrollable flow of liquids, pulp inflammation and peri-apical pathology. The purpose of this in vitro study was to evaluate micro-leakage of pit and fissure sealants after using three different pit and fissure preparation techniques: 1 acid etching, 2 fissure enameloplasty and acid etching, and 3 air abrasion and acid etching.Sixty-nine extracted sound molars and premolars were randomly divided into three groups (23 samples in each group. Teeth were prepared using one of three occlusal surface treatments. Then the sealant was applied on the occlusal fissures of all teeth. The teeth were thermocycled and stored in normal saline. All teeth were sealed apically and coated with nail varnish and then were immersed in a 2% solution of methylen blue. Two buccolingual sections were made. The surfaces were scored 0 to 3 for the extent of micro-leakage using a stereomicroscope. Data were analyzed by Kruskal- wallis and Dunn procedure.Enameloplasty and acid etching were significantly different regarding micro-leakage (P= 0.016, but no significant difference in micro-leakage was observed between air abrasion and the other methods.Enameloplasty followed by acid etching produced significantly less micro-leakage than the acid etching technique. Air abrasion acid etching was better than the acid etching technique in reducing micro-leakage too.

  10. CT evaluation of local leakage of bone cement after percutaneous kyphoplasty and vertebroplasty

    Energy Technology Data Exchange (ETDEWEB)

    Lee, In Jae; Choi, A. Lam; Yie, Mi-Yeon; Yoon, Ji Young; Jeon, Eui Yong; Koh, Sung Hye; Yoon, Dae Young; Lim, Kyung Ja (Dept. of Radiology, Hallym Univ. Sacred Heart Hospital, Seoul (Korea)), e-mail: ijlee2003@medimail.co.kr; Im, Hyoung June (Dept. of Occupational Medicine, Hallym Univ. College of Medicine, Seoul (Korea))

    2010-07-15

    Background: Percutaneous injection of bone cement (acrylic cement) during percutaneous kyphoplasty and vertebroplasty can cause symptomatic or asymptomatic complications due to leakage, extravasation or vascular migration of cement. Purpose: To investigate and to compare the incidence and site of local leakage or complications of bone cement after percutaneous kyphoplasty and vertebroplasty using bone cement. Material and Methods: We retrospectively reviewed 473 cases of percutaneous kyphoplasty or vertebroplasty performed under fluoroscopic guidance. Of the 473 cases, follow-up CT scans that covered the treated bones were available for 83 cases (59 kyphoplasty and 24 vertebroplasty). Results: The rate of local leakage of bone cement was 87.5% (21/24) for percutaneous vertebroplasty and 49.2% (29/59) for kyphoplasty. The most common site of local leakage was perivertebral soft tissue (n=8, 38.1%) for vertebroplasty. The most common site of local leakage was a perivertebral vein (n=7, 24.1%) for kyphoplasty. Two cases of pulmonary cement embolism developed: one case after kyphoplasty and one case after vertebroplasty. Conclusion: Local leakage of bone cement was more common for percutaneous vertebroplasty compared with kyphoplasty (P<0.005). The most common sites of local leakage were perivertebral soft tissue and perivertebral vein.

  11. A Novel Technique: Data Leakage Hindering in Cloud computing using Swarm Intelligence

    Directory of Open Access Journals (Sweden)

    C. Suresh Kumar

    2014-12-01

    Full Text Available Cloud computing is based on network based computing with the intention of takes place over the Internet. The cloud computing is a culmination of numerous attempts at large scale computing with seamless access to virtually limitless resources. It has many of the assistances such as cost effective, increased storage, shared resources, easy backup and restoration. Although there would be some challenges at some point in of the data diffusion in the cloud computing. The main objective of this context is to spotlight the issue of data security and privacy, probable to be data leakages in the cloud services. This paper initiates a novel scheme, Impeding Data Leakage technique in the cloud computing. This novel technique involved in hampering the leakage of data due to intrusions in the transmission pathway and not to detect or prevent the intrusion, it would lead to halt the entire data leakage with that meticulous path. The objective of this paper is to integrate ant colony optimization technique (ACO with artificial bee colony technique (ABC, for the intention of hampering the communication path which is interrupted/ the data is leaked. Thus, the ABC crafts the probable and conscientious path to the server and the ACO responses for the requested path and it would back forward the information if the data leakage arises. The leakage of data would be originated with the security restraints by the ACO. Therefore, the ABC and ACO are integrated to make a halt to the data leakage in the cloud service

  12. Leakage diagnostics, sealant longevity, sizing and technology transfer in residential thermal distribution systems

    Energy Technology Data Exchange (ETDEWEB)

    Walker, I.; Sherman, M.; Modera, M.; Siegel, J.

    1998-01-01

    This field study concentrated on measurement of duct leakage to outside the conditioned space because this is most useful in energy calculations. For room by room load/comfort requirements, the total duct leakage (including leaks to conditioned space) is more appropriate, particularly for additional comfort considerations. The objective of this field study is to help to identify major sources of uncertainty and to quantify the trade offs between different test methods. The identification of the areas requiring significant improvement will aid in future development of duct leakage test methods. For example, during the course of this study a new method for correcting house pressure tests to account for the presence of duct leakage in measured envelope leakage was developed. Each of the measurement techniques investigated has resulted from a different set of priorities and hence compromises. Thus each one of them is measuring a different physical quantity, although they all report the same parameter; duct leakage to outside at operating conditions. Given that real houses do not meet all of the simplifying assumptions that must be made to achieve similarity, the same numbers from each test method are not expected. Potentially these differences can be quite large and one of the benefits of field measurement is that the differences in the measurements helps put a realistic bound on how different some of these leakage diagnostics may be.

  13. Leakage limits for inflatable seals of sodium cooled fast breeder reactor

    International Nuclear Information System (INIS)

    Highlights: • All possible types/modes of gas escape covered. • Limits include simultaneous contributions from bypass and permeation leakage modes. • Leakage of radioactive cover gas with fission products assumed. • Possibility of sodium frost deposition in sealed gap considered. • Cover gas activity decay during fuel handling and relative importance of types/modes of leakage considered for realistic results and simpler seal design. -- Abstract: Estimation and stipulation of allowable leakage for inflatable seals of 500 MWe Prototype Fast Breeder Reactor is depicted. Leakage limits are specified using a conservative approach, which assumes escape of radioactive cover gas with fission products across the seals in bypass and permeation modes and possibility of sodium frost deposition in sealed gaps because of permeation leakage of inflation gas. Procedures to arrive at the allowable leakages of argon cover gas (normal-operation/fuel-handling: 10−3/10−2 scc/s/m length of seal) and argon inflation gas (10−3 scc/s/m length of seal) is described

  14. RETRAN code analysis of Tsuruga-2 plant chemical volume control system (CVCS) reactor coolant leakage incident

    International Nuclear Information System (INIS)

    In the Chemical Volume Control System (CVCS) reactor primary coolant leakage incident, which occurred in Tsuruga-2 (4-loop PWR, 3,423 MWt, 1,160 MWe) on July 12, 1999, it took about 14 hours before the leakage isolation. The delayed leakage isolation and a large amount of leakage have become a social concern. Effective procedure modification was studied. Three betterments were proposed based on a qualitative analysis to reduce the pressure and temperature of the primary loop as fast as possible by the current plant facilities while maintaining enough subcooling of the primary loop. I analyzed the incident with RETRAN code in order to quantitatively evaluate the leakage reduction when these betterments are adopted. This paper is very new because it created a typical analysis method for PWR plant behavior during plant shutdown procedure which conventional RETRAN transient analyses rarely dealt with. Also the event time is very long. To carry out this analysis successfully, I devised new models such as an Residual Heat Removal System (RHR) model etc. and simplified parts of the conventional model. Based on the analysis results, I confirmed that leakage can be reduced by about 30% by adopting these betterments. Then the Japan Atomic Power Company (JAPC) modified the operational procedure for reactor primary coolant leakage events adopting these betterments. (author)

  15. Mitral Valve Replacement with Half-and-Half Technique for Recurrent Mitral Paravalvular Leakage.

    Science.gov (United States)

    Morisaki, Akimasa; Kato, Yasuyuki; Takahashi, Yosuke; Shibata, Toshihiko

    2015-05-01

    Reoperation for paravalvular leakage can cause recurrent paravalvular leakage through severe damage to the mitral annulus. Previously, mitral valve replacement using a half-and-half technique for extensive mitral annular calcification was reported; here, application of the technique to treat recurrent paravalvular leakage is described. A 78-year-old male with three prior mitral valve replacements developed recurrent paravalvular leakage, for which he had undergone his third mitral valve replacement at the age of 69 years. On this occasion, a mechanical valve with circumferential equine pericardial patch reinforcement of the annulus had been used. Five years later, the patient developed hemolytic anemia and congestive heart failure due to recurrent paravalvular leakage. Intraoperatively, broad dehiscence was seen between the prosthetic valve and mitral annulus at two sites, the anterior and posterior commissures, without infection. A fourth mitral valve replacement was performed with a St. Jude Medical valve, using a half-and-half technique. This entailed the use of non-everting mattress sutures on the anterior half of the annulus, and everting mattress sutures on the left atrial wall around the posterior half of the annulus. Extensive annular defects required reinforcement of the posterior mitral annulus with a bovine pericardial patch. Postoperative echocardiography showed no paravalvular leakage. The half-and-half technique may be useful in treating recurrent paravalvular leakage of the mitral valve. PMID:26901904

  16. Postprocedural CT for perivertebral cement leakage in percutaneous vertebroplasty is not necessary - results from VERTOS II

    Energy Technology Data Exchange (ETDEWEB)

    Venmans, Alexander; Klazen, Caroline A.; Rooij, Willem Jan van; Lohle, Paul N. [St. Elisabeth Ziekenhuis Tilburg, Department of Radiology, Tilburg (Netherlands); Vries, Jolanda de [St. Elisabeth Ziekenhuis Tilburg, Department of Medical Psychology, Tilburg (Netherlands); Mali, Willem P. [University Medical Centre Utrecht, Department of Radiology, Utrecht (Netherlands)

    2011-01-15

    During percutaneous vertebroplasty (PV), perivertebral cement leakage frequently occurs. There is some concern that cement deposits may migrate towards the lungs via the veins during follow-up. We used baseline and follow-up computed tomography (CT) to assess the incidence and extend of late cement migration in a large consecutive patient cohort. VERTOS II is a prospective multicenter randomized controlled trial comparing PV with conservative therapy for osteoporotic vertebral compression fractures (OVCFs). Patients assigned to PV had baseline postprocedural CT scans of the treated vertebral bodies. After a mean follow-up of 22 months, 54 of 78 patients (69%) had follow-up CT. CT scans were analyzed and compared for perivertebral venous, discal, and soft tissue leakage. Perivertebral cement leakage occurred in 64 of 80 treated vertebrae (80%; 95% CI, 70% to 87%). All patients remained asymptomatic. Perivertebral venous leakage was present in 56 vertebrae (88%), mostly in the anterior external venous plexus (46 of 56, 82%). Discal leakage occurred in 22 of 64 vertebrae (34%) and soft tissue leakage in two of 64 (4%). Mean injected cement volume in vertebrae with leakage was higher (4.5 versus 3.7 cm{sup 3}, p = 0.04). Follow-up CT scan showed unchanged perivertebral cement leakages without late cement migration. Perivertebral cement leaks during PV for OVCFs occurred frequently in the VERTOS II trial. Cement leakage occurred more frequently with higher injected volumes. However, all patients remained asymptomatic, and late cement migration during follow-up did not occur. Standard postprocedural CT of the treated vertebral body in PV is not necessary. (orig.)

  17. Quantification of marginal leakage area of aesthetic restorations systems used in indirect inlays

    Directory of Open Access Journals (Sweden)

    Gleidson Rocha Arouca

    2011-01-01

    Full Text Available Introduction and objective: Marginal leakage of inlays restorations is a key issue for dentists, because of the damaging consequences that its intensity may cause to the tooth, periodontium, and longevity of restoration. The aim of this study was to assess the cervical marginal leakage of two composite systems and a pressed ceramic, through area calculation associated with the longest distance between the restoration and preparation cervical edges. Material and methods: Based on a metal pattern model with MOD inlay preparation, 15 type IV dental stone casts were obtained and randomly distributed into three groups (n = 5 as follows: Empress Group, Sinfony Group, Z350 Group. After restorations had been made, each one was positioned on the pattern model. Following, their middle and distal faces were photographed in order to analyze marginal cervical leakage through a computer software program. Results: Cervical marginal leakage area: there was statistically significant difference among the three groups (P < 0.05. Empress Group presented the highest values, followed by Sinfony and Z350 groups. Empress and Sinfony groups showed, respectively, a leakage area of 280% and 110% higher than Z350 group. Longest distance between restoration and preparation edges: Statistically significant differences were not observed between Empress and Sinfony groups; however, they showed statistically significant (P < 0.05 differences when compared to Z350 group (215% and 120% greater leakage than Z350 group, respectively. Conclusion: Considering the cervical marginal leakage area calculation and the longest distance between restoration and preparation edges, marginal leakage was smaller in Z350 group followed by Sinfony and Empress groups. In the analysis of cervical marginal leakage, all groups were clinically acceptable.

  18. Efficient quantum dialogue using entangled states and entanglement swapping without information leakage

    Science.gov (United States)

    Wang, He; Zhang, Yu Qing; Liu, Xue Feng; Hu, Yu Pu

    2016-06-01

    We propose a novel quantum dialogue protocol by using the generalized Bell states and entanglement swapping. In the protocol, a sequence of ordered two-qutrit entangled states acts as quantum information channel for exchanging secret messages directly and simultaneously. Besides, a secret key string is shared between the communicants to overcome information leakage. Different from those previous information leakage-resistant quantum dialogue protocols, the particles, composed of one of each pair of entangled states, are transmitted only one time in the proposed protocol. Security analysis shows that our protocol can overcome information leakage and resist several well-known attacks. Moreover, the efficiency of our scheme is acceptable.

  19. The Analysis and Comparison of Leakage Inductance in Different Winding Arrangements for Planar Transformer

    DEFF Research Database (Denmark)

    Ouyang, Ziwei; Thomsen, Ole Cornelius; Andersen, Michael Andreas E.

    2009-01-01

    (MMF) and energy distribution in planar transformer and correct the formula of leakage inductance proposed by previous publications. The investigation of different winding arrangements shows significant advantages of interleaving structure. In this work, a novel half turn structure is proposed to......The coupling of the windings can be easily increased by using multiply stacked planar windings connection. Interleaving is a well-known technique used to reduce leakage inductance and minimize high-frequency winding losses. The paper aims to analyze leakage inductance based on magneto motive force...

  20. Modeling the leakage of LCD displays with local backlight for quality assessment

    DEFF Research Database (Denmark)

    Mantel, Claire; Korhonen, Jari; Pedersen, Jesper M.;

    2014-01-01

    on videos displayed on LCD TV with local backlight dimming viewed from a 0° and 15° angles. The subjective results are then compared objective data using different leakage models: constant over the whole display or horizontally varying and three leakage factor (no leakage, measured at 0° and 15......The recent technique of local backlight dimming has a significant impact on the quality of images displayed with a LCD screen with LED local dimming. Therefore it represents a necessary step in the quality assessment chain, independently from the other processes applied to images. This paper...