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Sample records for c4 photosynthetic pathway

  1. Evolution of the C(4) photosynthetic mechanism: are there really three C(4) acid decarboxylation types?

    Science.gov (United States)

    Furbank, Robert T

    2011-05-01

    Some of the most productive plants on the planet use a variant of photosynthesis known as the C(4) pathway. This photosynthetic mechanism uses a biochemical pump to concentrate CO(2) to levels up to 10-fold atmospheric in specialized cells of the leaf where Rubisco, the primary enzyme of C(3) photosynthesis, is located. The basic biochemical pathways underlying this process, discovered more than 40 years ago, have been extensively studied and, based on these pathways, C(4) plants have been subdivided into two broad groups according to the species of C(4) acid produced in the mesophyll cells and into three groups according to the enzyme used to decarboxylate C(4) acids in the bundle sheath to release CO(2). Recent molecular, biochemical, and physiological data indicate that these three decarboxylation types may not be rigidly genetically determined, that the possibility of flexibility between the pathways exists and that this may potentially be both developmentally and environmentally controlled. This evidence is synthesized here and the implications for C(4) engineering discussed.

  2. Photosynthetic diversity meets biodiversity: the C4 plant example.

    Science.gov (United States)

    Sage, Rowan F; Stata, Matt

    2015-01-01

    Physiological diversification reflects adaptation for specific environmental challenges. As the major physiological process that provides plants with carbon and energy, photosynthesis is under strong evolutionary selection that gives rise to variability in nearly all parts of the photosynthetic apparatus. Here, we discuss how plants, notably those using C4 photosynthesis, diversified in response to environmental challenges imposed by declining atmospheric CO2 content in recent geological time. This reduction in atmospheric CO2 increases the rate of photorespiration and reduces photosynthetic efficiency. While plants have evolved numerous mechanisms to compensate for low CO2, the most effective are the carbon concentration mechanisms of C4, C2, and CAM photosynthesis; and the pumping of dissolved inorganic carbon, mainly by algae. C4 photosynthesis enables plants to dominate warm, dry and often salinized habitats, and to colonize areas that are too stressful for most plant groups. Because C4 lineages generally lack arborescence, they cannot form forests. Hence, where they predominate, C4 plants create a different landscape than would occur if C3 plants were to predominate. These landscapes (mostly grasslands and savannahs) present unique selection environments that promoted the diversification of animal guilds able to graze upon the C4 vegetation. Thus, the rise of C4 photosynthesis has made a significant contribution to the origin of numerous biomes in the modern biosphere.

  3. Walking the C4 pathway: past, present, and future.

    Science.gov (United States)

    Furbank, Robert T

    2016-07-01

    The year 2016 marks 50 years since the publication of the seminal paper by Hatch and Slack describing the biochemical pathway we now know as C4 photosynthesis. This review provides insight into the initial discovery of this pathway, the clues which led Hatch and Slack and others to these definitive experiments, some of the intrigue which surrounds the international activities which led up to the discovery, and personal insights into the future of this research field. While the biochemical understanding of the basic pathways came quickly, the role of the bundle sheath intermediate CO2 pool was not understood for a number of years, and the nature of C4 as a biochemical CO2 pump then linked the unique Kranz anatomy of C4 plants to their biochemical specialization. Decades of "grind and find biochemistry" and leaf physiology fleshed out the regulation of the pathway and the differences in physiological response to the environment between C3 and C4 plants. The more recent advent of plant transformation then high-throughput RNA and DNA sequencing and synthetic biology has allowed us both to carry out biochemical experiments and test hypotheses in planta and to better understand the evolution-driven molecular and genetic changes which occurred in the genomes of plants in the transition from C3 to C4 Now we are using this knowledge in attempts to engineer C4 rice and improve the C4 engine itself for enhanced food security and to provide novel biofuel feedstocks. The next 50 years of photosynthesis will no doubt be challenging, stimulating, and a drawcard for the best young minds in plant biology. PMID:27059273

  4. A portrait of the C4 photosynthetic family on the 50th anniversary of its discovery: species number, evolutionary lineages, and Hall of Fame.

    Science.gov (United States)

    Sage, Rowan F

    2016-07-01

    Fifty years ago, the C4 photosynthetic pathway was first characterized. In the subsequent five decades, much has been learned about C4 plants, such that it is now possible to place nearly all C4 species into their respective evolutionary lineages. Sixty-one independent lineages of C4 photosynthesis are identified, with additional, ancillary C4 origins possible in 12 of these principal lineages. The lineages produced ~8100 C4 species (5044 grasses, 1322 sedges, and 1777 eudicots). Using midpoints of stem and crown node dates in their respective phylogenies, the oldest and most speciose C4 lineage is the grass lineage Chloridoideae, estimated to be near 30 million years old. Most C4 lineages are estimated to be younger than 15 million years. Older C4 lineages tend to be more speciose, while those younger than 7 million years have <43 species each. To further highlight C4 photosynthesis for a 50th anniversary snapshot, a Hall of Fame comprised of the 40 most significant C4 species is presented. Over the next 50 years, preservation of the Earth's C4 diversity is a concern, largely because of habitat loss due to elevated CO2 effects, invasive species, and expanded agricultural activities. Ironically, some members of the C4 Hall of Fame are leading threats to the natural C4 flora due to their association with human activities on landscapes where most C4 plants occur. PMID:27053721

  5. C4 Photosynthetic Gene Expression in Light- and Dark-Grown Amaranth Cotyledons.

    Science.gov (United States)

    Wang, J. L.; Long, J. J.; Hotchkiss, T.; Berry, J. O.

    1993-08-01

    The patterns of expression for genes encoding several C4 photosynthetic enzymes were examined in light-grown and dark-grown (etiolated) cotyledons of amaranth (Amaranthus hypochondriacus), a dicotyledonous C4 plant. The large subunit and small subunit of ribulose-1,5-bisphosphate carboxylase (RuBPCase), phosphoenolpyruvate carboxylase (PEPCase), and pyruvate orthophosphate dikinase (PPdK) were all present in the cotyledons by d 2 after planting when the seedlings first emerged from the seed coat. Kranz anatomy was apparent in light-grown cotyledons throughout development, and the overall patterns of C4 gene expression were similar to those recently described for developing amaranth leaves (J.L. Wang, D.F. Klessig, J.O. Berry [1992] Plant Cell 4: 173-184). RuBPCase mRNA and proteins were present in both bundle sheath and mesophyll cells in a C3-like pattern during early development and became progressively more localized to bundle sheath cells in the C4-type pattern as the cotyledons expanded over 2 to 7 d. PEPCase and PPdK polypeptides were localized to mesophyll cells throughout development, even though PEPCase transcripts were detected in both bundle sheath and mesophyll cells. Kranz anatomy also developed in cotyledons grown in complete darkness. In 7-d-old dark-grown cotyledons, RuBPCase, PPdK, and PEPCase were all localized to the appropriate cell types, although at somewhat lower levels than in light-grown cotyledons. These findings demonstrate that the leaves and postembryonic cotyledons of amaranth undergo common developmental programs of C4 gene expression during maturation. Furthermore, light is not required for the cell-type-specific expression of genes encoding RuBPCase and other photosynthetic enzymes in this dicotyledonous C4 plant. PMID:12231890

  6. Photosynthetic Characteristics of Portulaca grandiflora, a Succulent C(4) Dicot : CELLULAR COMPARTMENTATION OF ENZYMES AND ACID METABOLISM.

    Science.gov (United States)

    Ku, S B; Shieh, Y J; Reger, B J; Black, C C

    1981-11-01

    The succulent, cylindrical leaves of the C(4) dicot Portulaca grandiflora possess three distinct green cell types: bundle sheath cells (BSC) in radial arrangement around the vascular bundles; mesophyll cells (MC) in an outer layer adjacent to the BSC; and water storage cells (WSC) in the leaf center. Unlike typical Kranz leaf anatomy, the MC do not surround the bundle sheath tissue but occur only in the area between the bundle sheath and the epidermis. Intercellular localization of photosynthetic enzymes was characterized using protoplasts isolated enzymatically from all three green cell types.Like other C(4) plants, P. grandiflora has ribulose 1,5-bisphosphate carboxylase and the decarboxylating enzyme, NADP(+)-malic enzyme, in the BSC. Unlike other C(4) plants, however, phosphoenolpyruvate carboxylase, pyruvate, Pi dikinase, and NADP(+)-malate dehydrogenase of the C(4) pathway were present in all three green cell types, indicating that all are capable of fixing CO(2) via phosphoenolpyruvate carboxylase and regenerating phosphoenolpyruvate. Other enzymes were about equally distributed between MC and BSC similar to other C(4) plants. The enzyme profile of the WSC was similar to that of the MC but with reduced activity in most enzymes, except mitochondrion-associated enzymes.Intracellular localization of enzymes was studied in organelles partitioned by differential centrifugation using mechanically ruptured mesophyll and bundle sheath protoplasts. Phosphoenolpyruvate carboxylase was a cytosolic enzyme in both cells; whereas, ribulose 1,5-bisphosphate carboxylase and NADP(+)-malic enzyme were exclusively compartmentalized in the bundle sheath chloroplasts. NADP(+)-malate dehydrogenase, pyruvate, Pi dikinase, aspartate aminotransferase, 3-phosphoglycerate kinase, and NADP(+)-triose-P dehydrogenase were predominantly localized in the chloroplasts while alanine aminotransferase and NAD(+)-malate dehydrogenase were mainly present in the cytosol of both cell types. Based

  7. Deriving C4 photosynthetic parameters from combined gas exchange and chlorophyll fluorescence using an Excel tool: theory and practice.

    Science.gov (United States)

    Bellasio, Chandra; Beerling, David J; Griffiths, Howard

    2016-06-01

    The higher photosynthetic potential of C4 plants has led to extensive research over the past 50 years, including C4 -dominated natural biomes, crops such as maize, or for evaluating the transfer of C4 traits into C3 lineages. Photosynthetic gas exchange can be measured in air or in a 2% Oxygen mixture using readily available commercial gas exchange and modulated PSII fluorescence systems. Interpretation of these data, however, requires an understanding (or the development) of various modelling approaches, which limit the use by non-specialists. In this paper we present an accessible summary of the theory behind the analysis and derivation of C4 photosynthetic parameters, and provide a freely available Excel Fitting Tool (EFT), making rigorous C4 data analysis accessible to a broader audience. Outputs include those defining C4 photochemical and biochemical efficiency, the rate of photorespiration, bundle sheath conductance to CO2 diffusion and the in vivo biochemical constants for PEP carboxylase. The EFT compares several methodological variants proposed by different investigators, allowing users to choose the level of complexity required to interpret data. We provide a complete analysis of gas exchange data on maize (as a model C4 organism and key global crop) to illustrate the approaches, their analysis and interpretation. © 2015 John Wiley & Sons Ltd.

  8. Deriving C4 photosynthetic parameters from combined gas exchange and chlorophyll fluorescence using an Excel tool: theory and practice.

    Science.gov (United States)

    Bellasio, Chandra; Beerling, David J; Griffiths, Howard

    2016-06-01

    The higher photosynthetic potential of C4 plants has led to extensive research over the past 50 years, including C4 -dominated natural biomes, crops such as maize, or for evaluating the transfer of C4 traits into C3 lineages. Photosynthetic gas exchange can be measured in air or in a 2% Oxygen mixture using readily available commercial gas exchange and modulated PSII fluorescence systems. Interpretation of these data, however, requires an understanding (or the development) of various modelling approaches, which limit the use by non-specialists. In this paper we present an accessible summary of the theory behind the analysis and derivation of C4 photosynthetic parameters, and provide a freely available Excel Fitting Tool (EFT), making rigorous C4 data analysis accessible to a broader audience. Outputs include those defining C4 photochemical and biochemical efficiency, the rate of photorespiration, bundle sheath conductance to CO2 diffusion and the in vivo biochemical constants for PEP carboxylase. The EFT compares several methodological variants proposed by different investigators, allowing users to choose the level of complexity required to interpret data. We provide a complete analysis of gas exchange data on maize (as a model C4 organism and key global crop) to illustrate the approaches, their analysis and interpretation. © 2015 John Wiley & Sons Ltd. PMID:26286697

  9. Characterization of photosynthesis, photoinhibition and the activities of C4 pathway enzymes in a superhigh-yield rice,Liangyoupeijiu

    Institute of Scientific and Technical Information of China (English)

    WANG; Qiang(王强); LU; Congming(卢从明); ZHANG; Qide(张其德); HAO; Naibin(郝迺斌); GE; Qiaoying(戈巧英); DONG; Fengqin(董凤琴); BAI; Kezhi(白克智); KUANG; Tingyun(匡廷云)

    2002-01-01

    Characteristics of photosynthetic gas exchange, photoinhibition and C4 pathway enzyme activities in both flag leaves and lemma were compared between a superhigh-yield rice (Oryza sativa L.) hybrid, Liangyoupeijiu and a traditional rice hybrid, Shanyou63. Liangyoupeijiu had a similar light saturated assimilation rate (Asat) to Shanyou63, but a much higher apparent quantum yield (AQY), carboxylation efficiency (CE) and quantum yield of CO2 fixation (φCO2). Liangyoupeijiu also showed a higher resistance to photoinhibition and higher non-radiative energy dissipation associated with the xanthophyll cycle than Shanyou63 when subjected to strong light. In addition, Liangyoupeijiu had higher activities of the C4 pathway enzymes in both flag leaves and lemmas than Shanyou63. These results indicate that higher light and CO2 use efficiency, higher resistance to photoinhibition and C4 pathway in both flag leaf and lemma may contribute to the higher yield of the superhigh-yield rice hybrid, Liangyoupeijiu.

  10. Effect of Soil Drought on C4 Photosynthetic Enzyme Activities of Flag Leaf and Ear in Wheat

    Institute of Scientific and Technical Information of China (English)

    WEI Ai-li; WANG Zhi-min; ZHAI Zhi-xi; GONG Yuan-shi

    2003-01-01

    The activities of RuBPC and C4 photosynthetic enzymes in ear and flag leaf blade were examinedin wheat. The results showed that photosynthesis of ear was less sensitive to soil drought than that of flag leaf,and decrease of CO2 assimilation in flag leaf blade with water stress was more than that in ear. Compared withflag leaf, ear organs(awn, glume and lemma) had higher C4 enzyme activities and lower RuBPC activity. Un-der moderate water-stress, the increase of C4 enzyme activities was induced, and the increase was higher in earthan in flag leaf. Under severe water-stress, relatively higher C4 enzyme activities were still maintained in ear,rather than that in flag leaf. It suggests that high activities of C4 enzymes in ear may contribute to its high tol-erance of photosynthesis to water-stress.

  11. Evolutionary bursts in Euphorbia (Euphorbiaceae) are linked with photosynthetic pathway.

    Science.gov (United States)

    Horn, James W; Xi, Zhenxiang; Riina, Ricarda; Peirson, Jess A; Yang, Ya; Dorsey, Brian L; Berry, Paul E; Davis, Charles C; Wurdack, Kenneth J

    2014-12-01

    The mid-Cenozoic decline of atmospheric CO2 levels that promoted global climate change was critical to shaping contemporary arid ecosystems. Within angiosperms, two CO2 -concentrating mechanisms (CCMs)-crassulacean acid metabolism (CAM) and C4 -evolved from the C3 photosynthetic pathway, enabling more efficient whole-plant function in such environments. Many angiosperm clades with CCMs are thought to have diversified rapidly due to Miocene aridification, but links between this climate change, CCM evolution, and increased net diversification rates (r) remain to be further understood. Euphorbia (∼2000 species) includes a diversity of CAM-using stem succulents, plus a single species-rich C4 subclade. We used ancestral state reconstructions with a dated molecular phylogeny to reveal that CCMs independently evolved 17-22 times in Euphorbia, principally from the Miocene onwards. Analyses assessing among-lineage variation in r identified eight Euphorbia subclades with significantly increased r, six of which have a close temporal relationship with a lineage-corresponding CCM origin. Our trait-dependent diversification analysis indicated that r of Euphorbia CCM lineages is approximately threefold greater than C3 lineages. Overall, these results suggest that CCM evolution in Euphorbia was likely an adaptive strategy that enabled the occupation of increased arid niche space accompanying Miocene expansion of arid ecosystems. These opportunities evidently facilitated recent, replicated bursts of diversification in Euphorbia.

  12. Are changes in sulfate assimilation pathway needed for evolution of C4 photosynthesis?

    Directory of Open Access Journals (Sweden)

    Silke Christine Weckopp

    2015-01-01

    Full Text Available C4 photosynthesis characteristically features a cell-specific localization of enzymes involved in CO2 assimilation in bundle sheath cells or mesophyll cells. Interestingly, enzymes of sulfur assimilation are also specifically present in bundle sheath cells of maize and many other C4 species. This localization, however, could not be confirmed in C4 species of the genus Flaveria. It was, therefore, concluded that the bundle sheath localization of sulfate assimilation occurs only in C4 monocots. However, recently the sulfate assimilation pathway was found coordinately enriched in bundle sheath cells of Arabidopsis, opening new questions about the significance of such cell-specific localization of the pathway. In addition, next generation sequencing revealed expression gradients of many genes from C3 to C4 species and mathematical modelling proposed a sequence of adaptations during the evolutionary path from C3 to C4. Indeed, such gradient, with higher expression of genes for sulfate reduction in C4 species, has been observed within the genus Flaveria. These new tools provide the basis for reexamining the intriguing question of compartmentalization of sulfur assimilation. Therefore, this review summarizes the findings on spatial separation of sulfur assimilation in C4 plants and Arabidopsis, assesses the information on sulfur assimilation provided by the recent transcriptomics data and discusses their possible impact on understanding this interesting feature of plant sulfur metabolism to find out whether changes in sulfate assimilation are part of a general evolutionary trajectory towards C4 photosynthesis.

  13. Seasonal and inter-annual photosynthetic response of representative C4 species to soil water content and leaf nitrogen concentration across a tropical seasonal floodplain

    NARCIS (Netherlands)

    Mantlana, K.B.; Arneth, A.; Veenendaal, E.M.; Wohland, P.; Wolski, P.; Kolle, O.; Lloyd, J.

    2008-01-01

    We examined the seasonal and inter-annual variation of leaf-level photosynthetic characteristics of three C4 perennial species, Cyperus articulatus, Panicum repens and Imperata cylindrica, and their response to environmental variables, to determine comparative physiological responses of plants repre

  14. Electron transfer pathway analysis in bacterial photosynthetic reaction center

    CERN Document Server

    Kitoh-Nishioka, Hirotaka

    2016-01-01

    A new computational scheme to analyze electron transfer (ET) pathways in large biomolecules is presented with applications to ETs in bacterial photosynthetic reaction center. It consists of a linear combination of fragment molecular orbitals and an electron tunneling current analysis, which enables an efficient first-principles analysis of ET pathways in large biomolecules. The scheme has been applied to the ET from menaquinone to ubiquinone via nonheme iron complex in bacterial photosynthetic reaction center. It has revealed that not only the central Fe$^{2+}$ ion but also particular histidine ligands are involved in the ET pathways in such a way to mitigate perturbations that can be caused by metal ion substitution and depletion, which elucidates the experimentally observed insensitivity of the ET rate to these perturbations.

  15. Structural Basis for the Function of Complement Component C4 within the Classical and Lectin Pathways of Complement

    DEFF Research Database (Denmark)

    Mortensen, Sofia; Kidmose, Rune Thomas; Petersen, Steen Vang;

    2015-01-01

    Complement component C4 is a central protein in the classical and lectin pathways within the complement system. During activation of complement, its major fragment C4b becomes covalently attached to the surface of pathogens and altered self-tissue, where it acts as an opsonin marking the surface...... for removal. Moreover, C4b provides a platform for assembly of the proteolytically active convertases that mediate downstream complement activation by cleavage of C3 and C5. In this article, we present the crystal and solution structures of the 195-kDa C4b. Our results provide the molecular details...

  16. Effects of mannitol induced osmotic stress on proline accumulation, pigment degradation, photosynthetic abilities and growth characters in C3 rice and C4 sorghum

    Institute of Scientific and Technical Information of China (English)

    Suriyan CHA-UM; Souvanh THADAVONG; Chalermpol KIRDMANEE

    2009-01-01

    Osmotic stress is one of the most important abiotic factors which inhibit growth and development in both the vegetative and reproductive stages of many plant species. The aim of this investigation was to compare the biochemical and physiological responses in C3 rice and C4 sorghum to water deficit. Chlorophyll a (Chla), chlorophyll b (Chlb), total chlorophyll (TC) and total carotenoid (Cx+c) contents in both rice and sorghum seedlings under osmotic stress were adversely affected, related to increasing osmotic pressure in the culture media. In addition, the chlorophyll's fluorescence parameters and net photosynthetic rate (Pn) decreased, leading to growth reduction. Also, a positive correlation was found between physiological and biochemical data, while proline accumulation showed a negative relationship. The Chlb, Pn and fresh weight were maintained better in osmotic-stressed (-1.205 MPa) C4 sorghum seedlings than those in C3 rice seedlings. The growth and physiological responses of C3 rice and C4 sorghum decreased depending on the plant species, the osmotic pressure in the media and their interactions. Pigment content and Pn ability in C4 sorghum grown under mannitol-induced osmotic stress increased to a greater degree than in C3 rice, resulting in maintenance of growth.

  17. A multi-pathway model for photosynthetic reaction center

    Science.gov (United States)

    Qin, M.; Shen, H. Z.; Yi, X. X.

    2016-03-01

    Charge separation occurs in a pair of tightly coupled chlorophylls at the heart of photosynthetic reaction centers of both plants and bacteria. Recently it has been shown that quantum coherence can, in principle, enhance the efficiency of a solar cell, working like a quantum heat engine. Here, we propose a biological quantum heat engine (BQHE) motivated by Photosystem II reaction center (PSII RC) to describe the charge separation. Our model mainly considers two charge-separation pathways which is more than that typically considered in the published literature. We explore how these cross-couplings increase the current and power of the charge separation and discuss the effects of multiple pathways in terms of current and power. The robustness of the BQHE against the charge recombination in natural PSII RC and dephasing induced by environments is also explored, and extension from two pathways to multiple pathways is made. These results suggest that noise-induced quantum coherence helps to suppress the influence of acceptor-to-donor charge recombination, and besides, nature-mimicking architectures with engineered multiple pathways for charge separations might be better for artificial solar energy devices considering the influence of environments.

  18. Photosynthetic Genes and Genes Associated with the C4 Trait in Maize Are Characterized by a Unique Class of Highly Regulated Histone Acetylation Peaks on Upstream Promoters.

    Science.gov (United States)

    Perduns, Renke; Horst-Niessen, Ina; Peterhansel, Christoph

    2015-08-01

    Histone modifications contribute to gene regulation in eukaryotes. We analyzed genome-wide histone H3 Lysine (Lys) 4 trimethylation and histone H3 Lys 9 acetylation (two modifications typically associated with active genes) in meristematic cells at the base and expanded cells in the blade of the maize (Zea mays) leaf. These data were compared with transcript levels of associated genes. For individual genes, regulations (fold changes) of histone modifications and transcript levels were much better correlated than absolute intensities. When focusing on regulated histone modification sites, we identified highly regulated secondary H3 Lys 9 acetylation peaks on upstream promoters (regulated secondary upstream peaks [R-SUPs]) on 10% of all genes. R-SUPs were more often found on genes that were up-regulated toward the blade than on down-regulated genes and specifically, photosynthetic genes. Among those genes, we identified six genes encoding enzymes of the C4 cycle and a significant enrichment of genes associated with the C4 trait derived from transcriptomic studies. On the DNA level, R-SUPs are frequently associated with ethylene-responsive elements. Based on these data, we suggest coevolution of epigenetic promoter elements during the establishment of C4 photosynthesis.

  19. A multi-pathway model for Photosynthetic reaction center

    CERN Document Server

    Qin, M; Yi, X X

    2015-01-01

    Charge separation in light-harvesting complexes occurs in a pair of tightly coupled chlorophylls at the heart of photosynthetic reaction centers of both plants and bacteria. Recently it has been shown that quantum coherence can, in principle, enhance the efficiency of a solar cell, working like a quantum heat engine (QHE). Here, we propose a biological quantum heat engine (BQHE) motivated by Photosystem {\\rm II} reaction center (PS{\\rm II} RC) to describe the charge separation. Our model mainly considers two charge-separation pathways more than that in the published literature. The two pathways can interfere via cross-couplings and work together to enhance the charge-separation yields. We explore how these cross-couplings increase the current and voltage of the charge separation and discuss the advantages of multiple pathways in terms of current and power. The robustness of the BQHE against the charge recombination in natural PS{\\rm II} RC and dephasing induced by environments is also explored, and extension ...

  20. Differences in the Photosynthetic Activity of C3 and C4 Graminoids in Short-Hydroperiod Marl Prairies of the Florida Everglades: Responses to Seasonality and Water Management

    Science.gov (United States)

    Oberbauer, S. F.; Olivas, P. C.; Schedlbauer, J. L.; Moser, J.

    2011-12-01

    Short hydroperiod marsh of the Everglades is dominated by a mix of sawgrass (Cladium jamaicense, a C3 sedge) and Muhly grass (Muhlenbergia capillaris, a C4 grass). Although the Everglades are located in a subtropical region, the climate is classified as tropical with distinct annual rainy and dry seasons during the summer and winter, respectively. Water levels in marl prairies vary greatly over the year driven by seasonality of rainfall, but are modified strongly by water management practices. As a result, the rainy season and period of inundation generally do not completely coincide. Water tables fall as much as 80 cm below the surface for approximately 6-7 months starting about December/January and reach up to 40 cm above the surface during the inundation period. Eddy covariance studies from this habitat revealed strong reductions in CO2 uptake coinciding with water tables inundating the surface. Submersion of macrophyte leaf area accounts for some of the reduction. To test if changes in leaf physiology also contribute to this reduced ecosystem CO2 uptake, we measured maximum assimilation rates (Amax) of the dominant species during both seasons in the marsh and on a nearby levee that remains above water. Typical of C4 plants, Amax of Muhlenbergia were high, > 20 μmol m-2 s-1, during the dry season. However when plant crowns were submerged, photosynthetic rates of emergent leaves of Muhlenbergia were strongly reduced to near compensation in some cases. In contrast, Amax of Muhlenbergia measured from higher terrain within 30 m of the flooded sites maintained high rates. Rates of Cladium were lower overall but did not show strong seasonality at either site. This wetland represents an unusual situation in which one of the codominants is effectively photosynthetically inactive during wet season. Planned changes to increase water flow to the Everglades and predicted changes in rainfall with climate change will strongly affect the carbon balance of this habitat.

  1. Phylogenetic niche conservatism in C4 grasses.

    Science.gov (United States)

    Liu, Hui; Edwards, Erika J; Freckleton, Robert P; Osborne, Colin P

    2012-11-01

    Photosynthetic pathway is used widely to discriminate plant functional types in studies of global change. However, independent evolutionary lineages of C(4) grasses with different variants of C(4) photosynthesis show different biogeographical relationships with mean annual precipitation, suggesting phylogenetic niche conservatism (PNC). To investigate how phylogeny and photosynthetic type differentiate C(4) grasses, we compiled a dataset of morphological and habitat information of 185 genera belonging to two monophyletic subfamilies, Chloridoideae and Panicoideae, which together account for 90 % of the world's C(4) grass species. We evaluated evolutionary variance and covariance of morphological and habitat traits. Strong phylogenetic signals were found in both morphological and habitat traits, arising mainly from the divergence of the two subfamilies. Genera in Chloridoideae had significantly smaller culm heights, leaf widths, 1,000-seed weights and stomata; they also appeared more in dry, open or saline habitats than those of Panicoideae. Controlling for phylogenetic structure showed significant covariation among morphological traits, supporting the hypothesis of phylogenetically independent scaling effects. However, associations between morphological and habitat traits showed limited phylogenetic covariance. Subfamily was a better explanation than photosynthetic type for the variance in most morphological traits. Morphology, habitat water availability, shading, and productivity are therefore all involved in the PNC of C(4) grass lineages. This study emphasized the importance of phylogenetic history in the ecology and biogeography of C(4) grasses, suggesting that divergent lineages need to be considered to fully understand the impacts of global change on plant distributions. PMID:22569558

  2. Photosynthetic Water Use Efficiency in it Sorghastrum nutans (C4) and it Solidago canadensis (C3) in Three Soils Along a CO2 Concentration Gradient

    Science.gov (United States)

    Fay, P. A.; Hui, D.; Procter, A.; Johnson, H. B.; Polley, H. W.; Jackson, R. B.

    2006-12-01

    The water use efficiency (WUE) of leaf photosynthetic carbon uptake is a key regulator of ecosystem carbon cycles and is strongly sensitive to atmospheric carbon dioxide concentrations [CO2]. However WUE responses to [CO2] typically differ between C3 and C4 species and may differ on varying soil types because of differences in soil moisture retention and plant uptake efficiency. We measured leaf-level photosynthesis (ACO2), stomatal conductance (gS), and transpiration (E) with an infrared gas analyzer to estimate WUE for the C4 grass Sorghastrum nutans and the C3 forb Solidago canadensis in constructed grassland species assemblages growing in three soils arrayed along a 200 560 ppm [CO2] gradient in the LYCOG Experiment, in central Texas, USA. LYCOG consists of eighty intact soil monoliths (1 m X 1 m X 1.5 m) representing 3 soil series, Austin (Udorthentic Haplustolls, a mollisol), Bastrop (Udic Paleustalfs, a sandy loam alfisol) and Houston Black (Udic Haplusterts, a vertisol). The monoliths were vegetated by transplanting 8 native perennial prairie species (5 grasses and 3 forbs), including S. nutans and S. canadensis. Both are abundant and widespread; S. nutans is a dominant species throughout much of North American tallgrass prairie, and S. canadensis is one of the most abundant and widespread forbs in North America. ACO2, gS, and E were measured three times during the growing season. Dark-adapted chlorophyll fluorescence (FvFm) was measured concurrently to assess photosynthetic capacity, and leaf water potential (Ψ leaf) and soil water content were measured to assess plant water status and soil moisture availability. WUE increased strongly (pincreasing ACO2 (p = 0.0055). This pattern was the same in both species (species x [CO2] ns). There was a corresponding increase in Ψ leaf (p = 0.01) at higher [CO2], but no [CO2] effect on FvFm. E and gS were lower on Houston than Austin or Bastrop soils (p ≤ 0.03), however there were no differences in the other leaf

  3. New evidence for grain specific C4 photosynthesis in wheat.

    Science.gov (United States)

    Rangan, Parimalan; Furtado, Agnelo; Henry, Robert J

    2016-01-01

    The C4 photosynthetic pathway evolved to allow efficient CO2 capture by plants where effective carbon supply may be limiting as in hot or dry environments, explaining the high growth rates of C4 plants such as maize. Important crops such as wheat and rice are C3 plants resulting in efforts to engineer them to use the C4 pathway. Here we show the presence of a C4 photosynthetic pathway in the developing wheat grain that is absent in the leaves. Genes specific for C4 photosynthesis were identified in the wheat genome and found to be preferentially expressed in the photosynthetic pericarp tissue (cross- and tube-cell layers) of the wheat caryopsis. The chloroplasts exhibit dimorphism that corresponds to chloroplasts of mesophyll- and bundle sheath-cells in leaves of classical C4 plants. Breeding to optimize the relative contributions of C3 and C4 photosynthesis may adapt wheat to climate change, contributing to wheat food security. PMID:27530078

  4. Ecohydrological responses of dense canopies to environmental variability: 1. Interplay between vertical structure and photosynthetic pathway

    Science.gov (United States)

    Drewry, D. T.; Kumar, P.; Long, S.; Bernacchi, C.; Liang, X.-Z.; Sivapalan, M.

    2010-12-01

    Vegetation acclimation to changing climate, in particular elevated atmospheric concentrations of carbon dioxide (CO2), has been observed to include modifications to the biochemical and ecophysiological functioning of leaves and the structural components of the canopy. These responses have the potential to significantly modify plant carbon uptake and surface energy partitioning, and have been attributed with large-scale changes in surface hydrology over recent decades. While the aggregated effects of vegetation acclimation can be pronounced, they often result from subtle changes in canopy properties that require the resolution of physical, biochemical and ecophysiological processes through the canopy for accurate estimation. In this paper, the first of two, a multilayer canopy-soil-root system model developed to capture the emergent vegetation responses to environmental change is presented. The model incorporates both C3 and C4 photosynthetic pathways, and resolves the vertical radiation, thermal, and environmental regimes within the canopy. The tight coupling between leaf ecophysiological functioning and energy balance determines vegetation responses to climate states and perturbations, which are modulated by soil moisture states through the depth of the root system. The model is validated for three growing seasons each for soybean (C3) and maize (C4) using eddy-covariance fluxes of CO2, latent, and sensible heat collected at the Bondville (Illinois) Ameriflux tower site. The data set provides an opportunity to examine the role of important environmental drivers and model skill in capturing variability in canopy-atmosphere exchange. Vertical variation in radiative states and scalar fluxes over a mean diurnal cycle are examined to understand the role of canopy structure on the patterns of absorbed radiation and scalar flux magnitudes and the consequent differences in sunlit and shaded source/sink locations through the canopies. An analysis is made of the impact of

  5. Photosynthetic, respiratory and extracellular electron transport pathways in cyanobacteria.

    Science.gov (United States)

    Lea-Smith, David J; Bombelli, Paolo; Vasudevan, Ravendran; Howe, Christopher J

    2016-03-01

    Cyanobacteria have evolved elaborate electron transport pathways to carry out photosynthesis and respiration, and to dissipate excess energy in order to limit cellular damage. Our understanding of the complexity of these systems and their role in allowing cyanobacteria to cope with varying environmental conditions is rapidly improving, but many questions remain. We summarize current knowledge of cyanobacterial electron transport pathways, including the possible roles of alternative pathways in photoprotection. We describe extracellular electron transport, which is as yet poorly understood. Biological photovoltaic devices, which measure electron output from cells, and which have been proposed as possible means of renewable energy generation, may be valuable tools in understanding cyanobacterial electron transfer pathways, and enhanced understanding of electron transfer may allow improvements in the efficiency of power output. This article is part of a Special Issue entitled Organization and dynamics of bioenergetic systems in bacteria, edited by Conrad Mullineaux.

  6. C4 photosynthesis in Euphorbia degeneri and E. remyi: a comparison of photosynthetic carbon metabolism in leaves, callus cultures and regenerated plants

    International Nuclear Information System (INIS)

    Based on analysis of 14CO2 fixation kinetics and assays of enzymes related to C4 metabolism (NAD-ME, NADP-ME, NAD-MDH, NADP-MDH, AST, ALT), leaves and regenerated plants of Euphorbia degeneri exhibit a modified NADP-ME-type photosynthesis. Apparently, both aspartate and malate are used for transport of CO2 to bundle sheath cells. Callus grown on either non-shoot-forming or shoot-forming media fixes CO2 into RPP-cycle intermediates and sucrose, as well as malate and aspartate. 14CO2 pulse/chase kinetics show no significant loss of label from C4 acids throughout a one minute chase. Analysis of PEPCase revealed the presence of 2 isoenzymes in both leaf and regenerated plant tissues (K/sub m/ [PEP] = 0.080 and 0.550) but only one isoenzyme in callus (K/sub m/ = 0.100). It appears that C4 photosynthesis does not occur in callus derived from this C4 dicot but is regenerated concomitant with shoot regeneration, and β-carboxylation of PEP in callus, mediated by the low K/sub m/ isoenzyme of PEPCase, produces C4 acids that are not involved in the CO2 shuttle mechanism characteristic of C4 photosynthesis. 161 references, 19 figures, 12 tables

  7. Elementary Energy Transfer Pathways in Allochromatium vinosum Photosynthetic Membranes.

    Science.gov (United States)

    Lüer, Larry; Carey, Anne-Marie; Henry, Sarah; Maiuri, Margherita; Hacking, Kirsty; Polli, Dario; Cerullo, Giulio; Cogdell, Richard J

    2015-11-01

    Allochromatium vinosum (formerly Chromatium vinosum) purple bacteria are known to adapt their light-harvesting strategy during growth according to environmental factors such as temperature and average light intensity. Under low light illumination or low ambient temperature conditions, most of the LH2 complexes in the photosynthetic membranes form a B820 exciton with reduced spectral overlap with LH1. To elucidate the reason for this light and temperature adaptation of the LH2 electronic structure, we performed broadband femtosecond transient absorption spectroscopy as a function of excitation wavelength in A. vinosum membranes. A target analysis of the acquired data yielded individual rate constants for all relevant elementary energy transfer (ET) processes. We found that the ET dynamics in high-light-grown membranes was well described by a homogeneous model, with forward and backward rate constants independent of the pump wavelength. Thus, the overall B800→B850→B890→ Reaction Center ET cascade is well described by simple triexponential kinetics. In the low-light-grown membranes, we found that the elementary backward transfer rate constant from B890 to B820 was strongly reduced compared with the corresponding constant from B890 to B850 in high-light-grown samples. The ET dynamics of low-light-grown membranes was strongly dependent on the pump wavelength, clearly showing that the excitation memory is not lost throughout the exciton lifetime. The observed pump energy dependence of the forward and backward ET rate constants suggests exciton diffusion via B850→ B850 transfer steps, making the overall ET dynamics nonexponential. Our results show that disorder plays a crucial role in our understanding of low-light adaptation in A. vinosum.

  8. Elementary Energy Transfer Pathways in Allochromatium vinosum Photosynthetic Membranes.

    Science.gov (United States)

    Lüer, Larry; Carey, Anne-Marie; Henry, Sarah; Maiuri, Margherita; Hacking, Kirsty; Polli, Dario; Cerullo, Giulio; Cogdell, Richard J

    2015-11-01

    Allochromatium vinosum (formerly Chromatium vinosum) purple bacteria are known to adapt their light-harvesting strategy during growth according to environmental factors such as temperature and average light intensity. Under low light illumination or low ambient temperature conditions, most of the LH2 complexes in the photosynthetic membranes form a B820 exciton with reduced spectral overlap with LH1. To elucidate the reason for this light and temperature adaptation of the LH2 electronic structure, we performed broadband femtosecond transient absorption spectroscopy as a function of excitation wavelength in A. vinosum membranes. A target analysis of the acquired data yielded individual rate constants for all relevant elementary energy transfer (ET) processes. We found that the ET dynamics in high-light-grown membranes was well described by a homogeneous model, with forward and backward rate constants independent of the pump wavelength. Thus, the overall B800→B850→B890→ Reaction Center ET cascade is well described by simple triexponential kinetics. In the low-light-grown membranes, we found that the elementary backward transfer rate constant from B890 to B820 was strongly reduced compared with the corresponding constant from B890 to B850 in high-light-grown samples. The ET dynamics of low-light-grown membranes was strongly dependent on the pump wavelength, clearly showing that the excitation memory is not lost throughout the exciton lifetime. The observed pump energy dependence of the forward and backward ET rate constants suggests exciton diffusion via B850→ B850 transfer steps, making the overall ET dynamics nonexponential. Our results show that disorder plays a crucial role in our understanding of low-light adaptation in A. vinosum. PMID:26536265

  9. Coevolution of plastid genomes and transcript processing pathways in photosynthetic alveolates

    OpenAIRE

    Dorrell, Richard G.

    2014-01-01

    Following their endosymbiotic uptake, plastids undergo profound changes to genome content and to their associated biochemistry. I have investigated how evolutionary transitions in plastid genomes may impact on biochemical pathways associated with plastid gene expression, focusing on the highly unusual plastids found in one group of eukaryotes, the alveolates. The principal photosynthetic alveolate lineage is the dinoflagellate algae. Most dinoflagellate species harbour unusual plastids derive...

  10. Solution Structures of Complement C2 and Its C4 Complexes Propose Pathway-specific Mechanisms for Control and Activation of the Complement Proconvertases.

    Science.gov (United States)

    Mortensen, Sofia; Jensen, Jan K; Andersen, Gregers R

    2016-08-01

    The lectin (LP) and classical (CP) pathways are two of the three main activation cascades of the complement system. These pathways start with recognition of different pathogen- or danger-associated molecular patterns and include identical steps of proteolytic activation of complement component C4, formation of the C3 proconvertase C4b2, followed by cleavage of complement component C2 within C4b2 resulting in the C3 convertase C4b2a. Here, we describe the solution structures of the two central complexes of the pathways, C3 proconvertase and C3 convertase, as well as the unbound zymogen C2 obtained by small angle x-ray scattering analysis. We analyzed both native and enzymatically deglycosylated C4b2 and C2 and showed that the resulting structural models were independent of the glycans. The small angle x-ray scattering-derived models suggest a different activation mode for the CP/LP C3 proconvertase as compared with that established for the alternative pathway proconvertase C3bB. This is likely due to the rather different structural and functional properties of the proteases activating the proconvertases. The solution structure of a stabilized form of the active CP/LP C3 convertase C4b2a is strikingly similar to the crystal structure of the alternative pathway C3 convertase C3bBb, which is in accordance with their identical functions in cleaving the complement proteins C3 and C5. PMID:27252379

  11. Solution Structures of Complement C2 and its C4 Complexes Propose Pathway Specific Mechanisms for Control and Activation of the Complement Proconvertases

    DEFF Research Database (Denmark)

    Mortensen, Sofia; Jensen, Jan Kristian; Andersen, Gregers Rom

    2016-01-01

    , formation of the C3 proconvertase C4b2, followed by cleavage of complement component C2 within C4b2 resulting in the C3 convertase C4b2a. Here we describe the solution structures of the two central complexes of the pathways, C3 proconvertase and C3 convertase, as well as the unbound zymogen C2 obtained by...... small-angle X-ray scattering (SAXS) analysis. We analysed both native and enzymatically deglycosylated C4b2 and C2 and showed that the resulting structural models were independent of the glycans. The SAXS derived models suggest a different activation mode for the CP/LP C3 proconvertase as compared to...... that established for the alternative pathway (AP) proconvertase C3bB. This is likely due to the rather different structural and functional properties of the proteases activating the proconvertases. The solution structure of a stabilized form of the active CP/LP C3 convertase C4b2a is strikingly similar...

  12. 氮素水平对转C4光合基因水稻花期剑叶PSⅡ荧光特性的影响%Responses of Chlorophyll Fluorescence Characteristics to Nitrogen in Flag Leaves of C4 Photosynthetic Enzymes Transgenic Rice during the Reproductive Stage

    Institute of Scientific and Technical Information of China (English)

    魏晓东; 李霞; 郭士伟; 陈平波

    2013-01-01

    There was close relationship between nitrogen use efficiency and photosynthetic capability. C4 photo-synthetic gene transgenic rice had higher light use efficiency and CO2 assimilation compared to traditional C3 rice cultivars. However, whether nitrogen had influence on photosynthesis of these transgenic rice cultivars was unknown Chlorophyll fluorescence can reflect intrinsic characteristics using fast measurement without any damage to leaves, and is usually used as probe of photosynthesis. In the present study, the pepc (PC) ,ppdk (PK)and pepc + ppdk (CK) transgenic rice plants were used as experimental materials with their wild type Kitaaki( WT) to investigate the responses of photosynthetic characteristics to different nitrogen levels in C4 photosynthetic gene transgenic rice at the late reproductive stage. Changes in SPAD values, morphological parameters were measured in flag leaves of four cultivars under different nitrogen levels. The analysis of chlorophyll fluorescence kinetic curves and some related parameters were also done under three nitrogen levels(0. 7 mmol/L N-1/4N low nitrogen,3 mmol/L N-1N control, 6 mmol/L N-2N high nitrogen)at the late reproductive stage using fast chlorophyll fluorescence kinetic technology, in order to explore the effects of nitrogen on photosystem Ⅱ ( PS Ⅱ ) function of C4 photosynthetic gene transgenic rice flag leaves. The results showed that 1/4N treatment increased root length,decreased plant height,leaf area and chlorophyll contents of flag leaves in all cultivars, while 2N treatment increased leaf area and chlorophyll contents. C4 photosynthetic gene transgenic plants exposed to 1/4N treatment had higher chlorophyll contents, and PC had longest root length and largest leaf area of flag leaves, which indicated that they had more morphological advantage under 1/4N treatment than wild type. The fluorescence O-J-I-P curves changes were found in all cultivars under 1/4N treatment. The K phase (at 300 μs) increased and C

  13. Robust Control of PEP Formation Rate in the Carbon Fixation Pathway of C4 Plants by a Bi-functional Enzyme

    Directory of Open Access Journals (Sweden)

    Hart Yuval

    2011-10-01

    Full Text Available Abstract Background C4 plants such as corn and sugarcane assimilate atmospheric CO2 into biomass by means of the C4 carbon fixation pathway. We asked how PEP formation rate, a key step in the carbon fixation pathway, might work at a precise rate, regulated by light, despite fluctuations in substrate and enzyme levels constituting and regulating this process. Results We present a putative mechanism for robustness in C4 carbon fixation, involving a key enzyme in the pathway, pyruvate orthophosphate dikinase (PPDK, which is regulated by a bifunctional enzyme, Regulatory Protein (RP. The robust mechanism is based on avidity of the bifunctional enzyme RP to its multimeric substrate PPDK, and on a product-inhibition feedback loop that couples the system output to the activity of the bifunctional regulator. The model provides an explanation for several unusual biochemical characteristics of the system and predicts that the system's output, phosphoenolpyruvate (PEP formation rate, is insensitive to fluctuations in enzyme levels (PPDK and RP, substrate levels (ATP and pyruvate and the catalytic rate of PPDK, while remaining sensitive to the system's input (light levels. Conclusions The presented PPDK mechanism is a new way to achieve robustness using product inhibition as a feedback loop on a bifunctional regulatory enzyme. This mechanism exhibits robustness to protein and metabolite levels as well as to catalytic rate changes. At the same time, the output of the system remains tuned to input levels.

  14. Rising atmospheric carbon dioxide concentration and the future of C4 crops for food and fuel

    OpenAIRE

    Leakey, Andrew D.B.

    2009-01-01

    Crops with the C4 photosynthetic pathway are vital to global food supply, particularly in the tropical regions where human well-being and agricultural productivity are most closely linked. While rising atmospheric [CO2] is the driving force behind the greater temperatures and water stress, which threaten to reduce future crop yields, it also has the potential to directly benefit crop physiology. The nature of C4 plant responses to elevated [CO2] has been controversial. Recent evidence from fr...

  15. Photosynthetic carbon fixation pathways in Zostera marina and three Florida seagrasses

    Energy Technology Data Exchange (ETDEWEB)

    Beer, S.; Wetzel, R.G.

    1982-06-01

    The photosynthetic carbon fixation pathways of four seagrass species, Zostera marina L. from Alaska and Thalassia testudinum Banks ex Konig, Syringodium filiforme Kutz. and Halodule wrightii Aschers. from the Gulf of Mexico, were investigated with a /sup 14/C pulse-chase technique. All species were found to be principally of the C/sub 3/ type. However, Thalassia and Halodule had higher initial incorporation rates into organic acids than is typical for terrestrial C/sub 3/ plants. Of 11 seagrass species investigated thus far for C/sub 3/ or C/sub 4/ metabolism using this technique, 10 were found to be principally of the C/sub 3/ type while only one exhibited C/sub 4/ metabolism.

  16. 干旱胁迫下调节ATP的含量对提高转玉米C4型pepc水稻光合速率的影响%Effect of regulating ATP on improving photosynthetic rate of transgenic rice with overexpressing maize C4 pepc under drought stress

    Institute of Scientific and Technical Information of China (English)

    霍垲; 陆巍; 李霞

    2015-01-01

    C4-phosphoenolpyruvate carboxylase (PEPC) gene (C4-pepc) plays a key role in C4 photosynthesis by catalyzing initial fixation of CO2 in C4 plants. To determine whether adenosine triphosphate (ATP) limits photosynthetic rate of transgenic rice plant with over-expressing maize C4-pepc, the second upper leaves of non-transgenic rice (WT) and transgenic rice with over-expressing maize C4-pepc (PC) were sprayed with 2 mmol·L−1 NaHSO3, 100 µmol·L−1 3-(3′,4′-dichlorophenyl)-1,1-dimethylurea (DCMU) and 10 µmol·L−1 oligomycin at 5−6 leaf blade seedling stage under 20%(m/v) polyethylene glycol 6000 (PEG-6000) treatment. Then the net photosynthetic rate (Pn), stomatal conductance (Gs), intercellular CO2 concentration (Ci), PEPC activity, ATP content andΦPS∐of PC and WT rice plants measured in the next morning. The results showed that 2 mmol·L−1 NaHSO3 enhanced Pn of the upper leaves of PC and WT rice seedlings without PEG-6000 treatment. However, the 100 µmol·L−1 DCMU and 10 µmol·L−1 oligomycin decreased Pn of the upper leaves of PC and WT rice seedlings without PEG-6000 treatment. Treatment with 2 mmol·L−1 NaHSO3 increased Gs and Ci of WT rice leaves but decreased Gs and Ci of PC rice leaves. While treatment with 100 µmol·L−1 DCMU increased Ci of PC and WT rice leaves, it decreased Gs of PC and WT rice leaves. PEG-6000 treatment decreased Pn of the upper leaves in PC and WT plants under different treatments. However, PEG-6000 treatment combined with 2 mmol·L−1 NaHSO3 solution spray retarded the decrease in Pn. Then PEG-6000 treatment combined with DCMU and oligomycin sprays increased the rate of Pn decline. After 8 hours of 20% PEG-6000 treatment combined with different solutions, Gs of PC rice leaves remained unchanged while Pn of PC rice leaves changed obviously. The results further showed that ATP content, PEPC activity andΦPS∐ content in rice leaves changed obviously under different treatments. While DCMU treatment accelerated

  17. Alternative photosynthetic electron transport pathways during anaerobiosis in the green alga Chlamydomonas reinhardtii.

    Science.gov (United States)

    Hemschemeier, Anja; Happe, Thomas

    2011-08-01

    Oxygenic photosynthesis uses light as energy source to generate an oxidant powerful enough to oxidize water into oxygen, electrons and protons. Upon linear electron transport, electrons extracted from water are used to reduce NADP(+) to NADPH. The oxygen molecule has been integrated into the cellular metabolism, both as the most efficient electron acceptor during respiratory electron transport and as oxidant and/or "substrate" in a number of biosynthetic pathways. Though photosynthesis of higher plants, algae and cyanobacteria produces oxygen, there are conditions under which this type of photosynthesis operates under hypoxic or anaerobic conditions. In the unicellular green alga Chlamydomonas reinhardtii, this condition is induced by sulfur deficiency, and it results in the production of molecular hydrogen. Research on this biotechnologically relevant phenomenon has contributed largely to new insights into additional pathways of photosynthetic electron transport, which extend the former concept of linear electron flow by far. This review summarizes the recent knowledge about various electron sources and sinks of oxygenic photosynthesis besides water and NADP(+) in the context of their contribution to hydrogen photoproduction by C. reinhardtii. This article is part of a Special Issue entitled: Regulation of Electron Transport in Chloroplasts. PMID:21376011

  18. Elucidating the composition and conservation of the autophagy pathway in photosynthetic eukaryotes.

    Science.gov (United States)

    Shemi, Adva; Ben-Dor, Shifra; Vardi, Assaf

    2015-04-01

    Aquatic photosynthetic eukaryotes represent highly diverse groups (green, red, and chromalveolate algae) derived from multiple endosymbiosis events, covering a wide spectrum of the tree of life. They are responsible for about 50% of the global photosynthesis and serve as the foundation for oceanic and fresh water food webs. Although the ecophysiology and molecular ecology of some algal species are extensively studied, some basic aspects of algal cell biology are still underexplored. The recent wealth of genomic resources from algae has opened new frontiers to decipher the role of cell signaling pathways and their function in an ecological and biotechnological context. Here, we took a bioinformatic approach to explore the distribution and conservation of TOR and autophagy-related (ATG) proteins (Atg in yeast) in diverse algal groups. Our genomic analysis demonstrates conservation of TOR and ATG proteins in green algae. In contrast, in all 5 available red algal genomes, we could not detect the sequences that encode for any of the 17 core ATG proteins examined, albeit TOR and its interacting proteins are conserved. This intriguing data suggests that the autophagy pathway is not conserved in red algae as it is in the entire eukaryote domain. In contrast, chromalveolates, despite being derived from the red-plastid lineage, retain and express ATG genes, which raises a fundamental question regarding the acquisition of ATG genes during algal evolution. Among chromalveolates, Emiliania huxleyi (Haptophyta), a bloom-forming coccolithophore, possesses the most complete set of ATG genes, and may serve as a model organism to study autophagy in marine protists with great ecological significance. PMID:25915714

  19. The Roles of Organic Acids in C4 Photosynthesis.

    Science.gov (United States)

    Ludwig, Martha

    2016-01-01

    Organic acids are involved in numerous metabolic pathways in all plants. The finding that some plants, known as C4 plants, have four-carbon dicarboxylic acids as the first product of carbon fixation showed these organic acids play essential roles as photosynthetic intermediates. Oxaloacetate (OAA), malate, and aspartate (Asp) are substrates for the C4 acid cycle that underpins the CO2 concentrating mechanism of C4 photosynthesis. In this cycle, OAA is the immediate, short-lived, product of the initial CO2 fixation step in C4 leaf mesophyll cells. The malate and Asp, resulting from the rapid conversion of OAA, are the organic acids delivered to the sites of carbon reduction in the bundle-sheath cells of the leaf, where they are decarboxylated, with the released CO2 used to make carbohydrates. The three-carbon organic acids resulting from the decarboxylation reactions are returned to the mesophyll cells where they are used to regenerate the CO2 acceptor pool. NADP-malic enzyme-type, NAD-malic enzyme-type, and phosphoenolpyruvate carboxykinase-type C4 plants were identified, based on the most abundant decarboxylating enzyme in the leaf tissue. The genes encoding these C4 pathway-associated decarboxylases were co-opted from ancestral C3 plant genes during the evolution of C4 photosynthesis. Malate was recognized as the major organic acid transferred in NADP-malic enzyme-type C4 species, while Asp fills this role in NAD-malic enzyme-type and phosphoenolpyruvate carboxykinase-type plants. However, accumulating evidence indicates that many C4 plants use a combination of organic acids and decarboxylases during CO2 fixation, and the C4-type categories are not rigid. The ability to transfer multiple organic acid species and utilize different decarboxylases has been suggested to give C4 plants advantages in changing and stressful environments, as well as during development, by facilitating the balance of energy between the two cell types involved in the C4 pathway of CO2

  20. Evolutionary implications of C3 -C4 intermediates in the grass Alloteropsis semialata.

    Science.gov (United States)

    Lundgren, Marjorie R; Christin, Pascal-Antoine; Escobar, Emmanuel Gonzalez; Ripley, Brad S; Besnard, Guillaume; Long, Christine M; Hattersley, Paul W; Ellis, Roger P; Leegood, Richard C; Osborne, Colin P

    2016-09-01

    C4 photosynthesis is a complex trait resulting from a series of anatomical and biochemical modifications to the ancestral C3 pathway. It is thought to evolve in a stepwise manner, creating intermediates with different combinations of C4 -like components. Determining the adaptive value of these components is key to understanding how C4 photosynthesis can gradually assemble through natural selection. Here, we decompose the photosynthetic phenotypes of numerous individuals of the grass Alloteropsis semialata, the only species known to include both C3 and C4 genotypes. Analyses of δ(13) C, physiology and leaf anatomy demonstrate for the first time the existence of physiological C3 -C4 intermediate individuals in the species. Based on previous phylogenetic analyses, the C3 -C4 individuals are not hybrids between the C3 and C4 genotypes analysed, but instead belong to a distinct genetic lineage, and might have given rise to C4 descendants. C3 A. semialata, present in colder climates, likely represents a reversal from a C3 -C4 intermediate state, indicating that, unlike C4 photosynthesis, evolution of the C3 -C4 phenotype is not irreversible. PMID:26524631

  1. Introduction of new carotenoids into the bacterial photosynthetic apparatus by combining the carotenoid biosynthetic pathways of Erwinia herbicola and Rhodobacter sphaeroides.

    OpenAIRE

    Hunter, C N; Hundle, B S; Hearst, J E; Lang, H.P.; Gardiner, A.T.; Takaichi, S; Cogdell, R. J.

    1994-01-01

    Carotenoids have two major functions in bacterial photosynthesis, photoprotection and accessory light harvesting. The genes encoding many carotenoid biosynthetic pathways have now been mapped and cloned in several different species, and the availability of cloned genes which encode the biosynthesis of carotenoids not found in the photosynthetic genus Rhodobacter opens up the possibility of introducing a wider range of foreign carotenoids into the bacterial photosynthetic apparatus than would ...

  2. Heritability and expression of C4 photosynthesis in hybrids between C3-C4 and C4 Flaveria

    International Nuclear Information System (INIS)

    In general, leaves of C4 plants are considered to be more efficient at fixing atmospheric CO2 than those of C3 plants. Such efficiency in carbon assimilation is attributed to unique C4 features in anatomy, physiology and biochemistry of leaves. In these studies I investigated whether these C4 characteristics can be inherited and expressed in C3-C4 species through artificial hybridization with C4 species in genus Flaveria. The expression of C4 photosynthesis in the parent C4 parent F. brownii is influenced by the light intensity during growth. Characterization of these F1 hybrids demonstrates that several C4 traits are heritable. The expression of Kranz leaf anatomy, and the activities and/or quantities of key C4 enzymes in the F1 hybrids are intermediate between levels in the parents. Enzyme localization studies with isolated leaf mesophyll and bundle sheath protoplasts indicated that these hybrids lack a complete compartmentation of major photosynthetic enzymes, but they do exhibit a differential distribution of these enzymes between the two cell types. Furthermore, 14CO2 labeling experiments showed that they all possess a high degree of functional C4 photosynthesis, which may in part contribute to the reduced photorespiration observed in the F1 hybrids

  3. Impact of global climate change on ecosystem-level interactions among sympatric plants from all three photosynthetic pathways. Terminal report

    Energy Technology Data Exchange (ETDEWEB)

    Nobel, P.S.

    1997-12-17

    The proposed research will determine biochemical and physiological responses to variations in environmental factors for plants of all three photosynthetic pathways under competitive situations in the field. These responses will be used to predict the effects of global climatic change on an ecosystem in the northwestern Sonoran Desert where the C{sub 3} subshrub Encelia farinosa, the C{sub 4} bunchgrass Hilaria rigida, and the CAM succulent Agave deserti are co-dominants. These perennials are relatively short with overlapping shallow roots facilitating the experimental measurements as well as leading to competition for soil water. Net CO{sub 2} uptake over 24-h periods measured in the laboratory will be analyzed using an environmental productivity index (EPI) that can incorporate simultaneous effects of soil water, air temperature, and light. Based on EPI, net CO{sub 2} uptake and hence plant productivity will be predicted for the three species in the field under various treatments. Activity of the two CO{sub 2} fixation enzymes, Rubisco and PEPCase, will be determined for these various environmental conditions; also, partitioning of carbon to various organs will be measured based on {sup 14}CO{sub 2} labeling and dry weight analysis. Thus, enzymatic and partitioning controls on competition among sympatric model plants representing all three photosynthetic pathways will be investigated.

  4. Macro-Climatic Distribution Limits Show Both Niche Expansion and Niche Specialization among C4 Panicoids.

    Science.gov (United States)

    Aagesen, Lone; Biganzoli, Fernando; Bena, Julia; Godoy-Bürki, Ana C; Reinheimer, Renata; Zuloaga, Fernando O

    2016-01-01

    Grasses are ancestrally tropical understory species whose current dominance in warm open habitats is linked to the evolution of C4 photosynthesis. C4 grasses maintain high rates of photosynthesis in warm and water stressed environments, and the syndrome is considered to induce niche shifts into these habitats while adaptation to cold ones may be compromised. Global biogeographic analyses of C4 grasses have, however, concentrated on diversity patterns, while paying little attention to distributional limits. Using phylogenetic contrast analyses, we compared macro-climatic distribution limits among ~1300 grasses from the subfamily Panicoideae, which includes 4/5 of the known photosynthetic transitions in grasses. We explored whether evolution of C4 photosynthesis correlates with niche expansions, niche changes, or stasis at subfamily level and within the two tribes Paniceae and Paspaleae. We compared the climatic extremes of growing season temperatures, aridity, and mean temperatures of the coldest months. We found support for all the known biogeographic distribution patterns of C4 species, these patterns were, however, formed both by niche expansion and niche changes. The only ubiquitous response to a change in the photosynthetic pathway within Panicoideae was a niche expansion of the C4 species into regions with higher growing season temperatures, but without a withdrawal from the inherited climate niche. Other patterns varied among the tribes, as macro-climatic niche evolution in the American tribe Paspaleae differed from the pattern supported in the globally distributed tribe Paniceae and at family level.

  5. Leaf anatomy and subgeneric affiliations of C3 and C4 species of Suaeda (Chenopodiaceae) in North America

    International Nuclear Information System (INIS)

    The halophytic genus Suaeda (Chenopodiaceae) includes species with the C3 and C4 photosynthetic pathways. North American species of this genus were investigated to determine whether C3 and C4 leaf anatomy are consistent within the two sections of Suaeda, Chenopodina and Limbogermen, present on this continent. All species from section Chenopodina were found to possess C3 anatomy, whereas all species from section Limbogermen were found to be C4 species. Characteristics of leaf anatomy and chloroplast ultrastructure are similar to those reported from C3 and C4 species, respectively, from the Eastern Hemisphere. All species from section Limbogermen have the suaedoid type of leaf anatomy, characterized by differentiation of the mesophyll into palisade parenchyma and a chlorenchymatous sheath surrounding central water-storage tissue, as well as leaf carbon isotope ratios of above -20. All species from section Chenopodina have austrobassioid leaf anatomy without a chlorenchymatous sheath and leaf carbon isotope ratio values of below -20. According to our literature review, the photosynthetic pathway has now been reported for about half (44) of the Suaeda species worldwide. The C3 and C4 photosynthetic syndromes are with few exceptions distributed along sectional or subsectional lines. These findings throw new light on the infrageneric taxonomy of this genus

  6. Metabolic Engineering and Modeling of Metabolic Pathways to Improve Hydrogen Production by Photosynthetic Bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Jiao, Y. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Navid, A. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2014-12-19

    Rising energy demands and the imperative to reduce carbon dioxide (CO2) emissions are driving research on biofuels development. Hydrogen gas (H2) is one of the most promising biofuels and is seen as a future energy carrier by virtue of the fact that 1) it is renewable, 2) does not evolve the “greenhouse gas” CO2 in combustion, 3) liberates large amounts of energy per unit weight in combustion (having about 3 times the energy content of gasoline), and 4) is easily converted to electricity by fuel cells. Among the various bioenergy strategies, environmental groups and others say that the concept of the direct manufacture of alternative fuels, such as H2, by photosynthetic organisms is the only biofuel alternative without significant negative criticism [1]. Biological H2 production by photosynthetic microorganisms requires the use of a simple solar reactor such as a transparent closed box, with low energy requirements, and is considered as an attractive system to develop as a biocatalyst for H2 production [2]. Various purple bacteria including Rhodopseudomonas palustris, can utilize organic substrates as electron donors to produce H2 at the expense of solar energy. Because of the elimination of energy cost used for H2O oxidation and the prevention of the production of O2 that inhibits the H2-producing enzymes, the efficiency of light energy conversion to H2 by anoxygenic photosynthetic bacteria is in principle much higher than that by green algae or cyanobacteria, and is regarded as one of the most promising cultures for biological H2 production [3]. Here implemented a simple and relatively straightforward strategy for hydrogen production by photosynthetic microorganisms using sunlight, sulfur- or iron-based inorganic substrates, and CO2 as the feedstock. Carefully selected microorganisms with bioengineered beneficial

  7. Emergence and transmission pathways of rapidly evolving evolutionary branch C4a strains of human enterovirus 71 in the Central Plain of China.

    Directory of Open Access Journals (Sweden)

    Yong Zhang

    Full Text Available BACKGROUND: Large-scale outbreaks of hand, foot, and mouth disease (HFMD occurred repeatedly in the Central Plain of China (Shandong, Anhui, and Henan provinces from 2007 until now. These epidemics have increased in size and severity each year and are a major public health concern in mainland China. PRINCIPAL FINDINGS: Phylogenetic analysis was performed and a Bayesian Markov chain Monte Carlo tree was constructed based on the complete VP1 sequences of HEV71 isolates. These analyses showed that the HFMD epidemic in the Central Plain of China was caused by at least 5 chains of HEV71 transmission and that the virus continued to circulate and evolve over the winter seasons between outbreaks. Between 1998 and 2010, there were 2 stages of HEV71 circulation in mainland China, with a shift from evolutionary branch C4b to C4a in 2003-2004. The evolution rate of C4a HEV71 was 4.99×10(-3 substitutions per site per year, faster than the mean of all HEV71 genotypes. The most recent common ancestor estimates for the Chinese clusters dated to October 1994 and November 1993 for the C4a and C4b evolutionary branches, respectively. Compared with all C4a HEV71 strains, a nucleotide substitution in all C4b HEV71 genome (A to C reversion at nt2503 in the VP1 coding region, which caused amino acid substitution of VP1-10: Gln to His had reverted. CONCLUSIONS: The data suggest that C4a HEV71 strains introduced into the Central Plain of China are responsible for the recent outbreaks. The relationships among HEV71 isolates determined from the combined sequence and epidemiological data reveal the underlying seasonal dynamics of HEV71 circulation. At least 5 HEV71 lineages circulated in the Central Plain of China from 2007 to 2009, and the Shandong and Anhui lineages were found to have passed through a genetic bottleneck during the low-transmission winter season.

  8. Alternative oxidase: a respiratory electron transport chain pathway essential for maintaining photosynthetic performance during drought stress.

    Science.gov (United States)

    Vanlerberghe, Greg C; Martyn, Greg D; Dahal, Keshav

    2016-07-01

    Photosynthesis and respiration are the hubs of energy metabolism in plants. Drought strongly perturbs photosynthesis as a result of both diffusive limitations resulting from stomatal closure, and in some cases biochemical limitations that are associated with a reduced abundance of key photosynthetic components. The effects of drought on respiration, particularly respiration in the light (RL ), are less understood. The plant mitochondrial electron transport chain includes a non-energy conserving terminal oxidase called alternative oxidase (AOX). Several studies have shown that drought increases AOX transcript, protein and maximum capacity. Here we review recent studies comparing wild-type (WT) tobacco to transgenic lines with altered AOX protein amount. Specifically during drought, RL was compromised in AOX knockdown plants and enhanced in AOX overexpression plants, compared with WT. Significantly, these differences in RL were accompanied by dramatic differences in photosynthetic performance. Knockdown of AOX increased the susceptibility of photosynthesis to drought-induced biochemical limitations, while overexpression of AOX delayed the development of such biochemical limitations, compared with WT. Overall, the results indicate that AOX is essential to maintaining RL during drought, and that this non-energy conserving respiration maintains photosynthesis during drought by promoting energy balance in the chloroplast. This review also outlines several areas for future research, including the possibility that enhancement of non-energy conserving respiratory electron sinks may be a useful biotechnological approach to increase plant performance during stress. PMID:27080742

  9. Chalcone-based Selective Inhibitors of a C4 Plant Key Enzyme as Novel Potential Herbicides

    Science.gov (United States)

    Nguyen, G. T. T.; Erlenkamp, G.; Jäck, O.; Küberl, A.; Bott, M.; Fiorani, F.; Gohlke, H.; Groth, G.

    2016-06-01

    Weeds are a challenge for global food production due to their rapidly evolving resistance against herbicides. We have identified chalcones as selective inhibitors of phosphoenolpyruvate carboxylase (PEPC), a key enzyme for carbon fixation and biomass increase in the C4 photosynthetic pathway of many of the world’s most damaging weeds. In contrast, many of the most important crop plants use C3 photosynthesis. Here, we show that 2‧,3‧,4‧,3,4-Pentahydroxychalcone (IC50 = 600 nM) and 2‧,3‧,4‧-Trihydroxychalcone (IC50 = 4.2 μM) are potent inhibitors of C4 PEPC but do not affect C3 PEPC at a same concentration range (selectivity factor: 15–45). Binding and modeling studies indicate that the active compounds bind at the same site as malate/aspartate, the natural feedback inhibitors of the C4 pathway. At the whole plant level, both substances showed pronounced growth-inhibitory effects on the C4 weed Amaranthus retroflexus, while there were no measurable effects on oilseed rape, a C3 plant. Growth of selected soil bacteria was not affected by these substances. Our chalcone compounds are the most potent and selective C4 PEPC inhibitors known to date. They offer a novel approach to combat C4 weeds based on a hitherto unexplored mode of allosteric inhibition of a C4 plant key enzyme.

  10. Diurnal variations in pathways of photosynthetic carbon fixation in a freshwater cyanobacterium

    Science.gov (United States)

    Labiosa, R. G.; Arrigo, K. R.; Grossman, A.; Reddy, T. E.; Shrager, J.

    2003-04-01

    Understanding phytoplankton photosynthesis is critical to several fields including ecology and global biogeochemistry. The efficiency with which phytoplankton fix carbon depends upon the ambient light field, which is in turn dependent upon sun angle and the depth of mixing in the water column. In this pilot project, Synechocystis PCC 6803 was chosen as a model organism with which to study the molecular and physiological responses of phytoplankton to diurnal changes in light levels. Advantages of using this organism include that its genome has been sequenced, allowing the use of microarray technology, that it is readily grown as single colonies on plates and in liquid cultures, and that it is easy to manipulate genetically (generate and complement mutants). Axenic cultures of Synechocystis were grown under precisely controlled conditions in a "cyclodyne", a chemostat in which the light intensity cycles to mimic diurnal changes in light level, where the light consisted of sinusoidal daylight (400 μ mol photons m-2 s-1 at noon) followed by 12 hours of darkness for several weeks. After one week to allow the cells to acclimate to the light conditions, the cultures were sampled and extracted for RNA analysis every two hours over the course of several days. At these time points, absorption spectra, light scattering and chlorophyll a concentrations were determined. Initial results from Northern Blot hybridizations (examining RNA levels for individual genes) indicate that, the transcripts encoding photosynthetic proteins (i.e., PsbA2, PsaA and CpcB, in photosystem II, photosystem I, and phycobilisomes, respectively) are highest during the light. Initial results show that in the middle of the night, the psbA2 transcripts are 2-fold less while the psaA and cpcB are greater than 4-fold less than in the middle of the day. For the most part, the transcripts encoding photosynthetic proteins track the light cycle, although with different trends at daybreak and after night falls

  11. Engineering C4 photosynthesis into C3 chassis in the synthetic biology age.

    Science.gov (United States)

    Schuler, Mara L; Mantegazza, Otho; Weber, Andreas P M

    2016-07-01

    C4 photosynthetic plants outperform C3 plants in hot and arid climates. By concentrating carbon dioxide around Rubisco C4 plants drastically reduce photorespiration. The frequency with which plants evolved C4 photosynthesis independently challenges researchers to unravel the genetic mechanisms underlying this convergent evolutionary switch. The conversion of C3 crops, such as rice, towards C4 photosynthesis is a long-standing goal. Nevertheless, at the present time, in the age of synthetic biology, this still remains a monumental task, partially because the C4 carbon-concentrating biochemical cycle spans two cell types and thus requires specialized anatomy. Here we review the advances in understanding the molecular basis and the evolution of the C4 trait, advances in the last decades that were driven by systems biology methods. In this review we emphasise essential genetic engineering tools needed to translate our theoretical knowledge into engineering approaches. With our current molecular understanding of the biochemical C4 pathway, we propose a simplified rational engineering model exclusively built with known C4 metabolic components. Moreover, we discuss an alternative approach to the progressing international engineering attempts that would combine targeted mutagenesis and directed evolution. PMID:26945781

  12. Engineering C4 photosynthesis into C3 chassis in the synthetic biology age.

    Science.gov (United States)

    Schuler, Mara L; Mantegazza, Otho; Weber, Andreas P M

    2016-07-01

    C4 photosynthetic plants outperform C3 plants in hot and arid climates. By concentrating carbon dioxide around Rubisco C4 plants drastically reduce photorespiration. The frequency with which plants evolved C4 photosynthesis independently challenges researchers to unravel the genetic mechanisms underlying this convergent evolutionary switch. The conversion of C3 crops, such as rice, towards C4 photosynthesis is a long-standing goal. Nevertheless, at the present time, in the age of synthetic biology, this still remains a monumental task, partially because the C4 carbon-concentrating biochemical cycle spans two cell types and thus requires specialized anatomy. Here we review the advances in understanding the molecular basis and the evolution of the C4 trait, advances in the last decades that were driven by systems biology methods. In this review we emphasise essential genetic engineering tools needed to translate our theoretical knowledge into engineering approaches. With our current molecular understanding of the biochemical C4 pathway, we propose a simplified rational engineering model exclusively built with known C4 metabolic components. Moreover, we discuss an alternative approach to the progressing international engineering attempts that would combine targeted mutagenesis and directed evolution.

  13. Different pathways are involved in the enhancement of photosynthetic rate by sodium bisulfite and benzyladenine, a case study with strawberry (Fragaria x Ananassa Duch) plants

    NARCIS (Netherlands)

    Guo, Y.P.; Peng, Y.; Lin, M.L.; Guo, D.P.; Hu, M.J.; Shen, Y.K.; Li, D.Y.; Zheng, S.J.

    2006-01-01

    In order to understand the pathway involved in the chemical enhancement of photosynthetic rate, sodium bisulfite (NaHSO3) and benzyladenine (BA), a growth regulator, were applied to strawberry plants. The influence of these compounds on gas exchange and millisecond delayed light emission (ms-DLE) wa

  14. Photosynthesis of C3, C3-C4, and C4 grasses at glacial CO2.

    Science.gov (United States)

    Pinto, Harshini; Sharwood, Robert E; Tissue, David T; Ghannoum, Oula

    2014-07-01

    Most physiology comparisons of C3 and C4 plants are made under current or elevated concentrations of atmospheric CO2 which do not reflect the low CO2 environment under which C4 photosynthesis has evolved. Accordingly, photosynthetic nitrogen (PNUE) and water (PWUE) use efficiency, and the activity of the photosynthetic carboxylases [Rubisco and phosphoenolpyruvate carboxylase (PEPC)] and decarboxylases [NADP-malic enzyme (NADP-ME) and phosphoenolpyruvate carboxykinase (PEP-CK)] were compared in eight C4 grasses with NAD-ME, PCK, and NADP-ME subtypes, one C3 grass, and one C3-C4 grass grown under ambient (400 μl l(-1)) and glacial (180 μl l(-1)) CO2. Glacial CO2 caused a smaller reduction of photosynthesis and a greater increase of stomatal conductance in C4 relative to C3 and C3-C4 species. Panicum bisulcatum (C3) acclimated to glacial [CO2] by doubling Rubisco activity, while Rubisco was unchanged in Panicum milioides (C3-C4), possibly due to its high leaf N and Rubisco contents. Glacial CO2 up-regulated Rubisco and PEPC activities in concert for several C4 grasses, while NADP-ME and PEP-CK activities were unchanged, reflecting the high control exerted by the carboxylases relative to the decarboxylases on the efficiency of C4 metabolism. Despite having larger stomatal conductance at glacial CO2, C4 species maintained greater PWUE and PNUE relative to C3-C4 and C3 species due to higher photosynthetic rates. Relative to other C4 subtypes, NAD-ME and PEP-CK grasses had the highest PWUE and PNUE, respectively; relative to C3, the C3-C4 grass had higher PWUE and similar PNUE at glacial CO2. Biomass accumulation was reduced by glacial CO2 in the C3 grass relative to the C3-C4 grass, while biomass was less reduced in NAD-ME grasses compared with NADP-ME and PCK grasses. Under glacial CO2, high resource use efficiency offers a key evolutionary advantage for the transition from C3 to C4 photosynthesis in water- and nutrient-limited environments.

  15. Discrete redox signaling pathways regulate photosynthetic light-harvesting and chloroplast gene transcription.

    Directory of Open Access Journals (Sweden)

    John F Allen

    Full Text Available In photosynthesis in chloroplasts, two related regulatory processes balance the actions of photosystems I and II. These processes are short-term, post-translational redistribution of light-harvesting capacity, and long-term adjustment of photosystem stoichiometry initiated by control of chloroplast DNA transcription. Both responses are initiated by changes in the redox state of the electron carrier, plastoquinone, which connects the two photosystems. Chloroplast Sensor Kinase (CSK is a regulator of transcription of chloroplast genes for reaction centres of the two photosystems, and a sensor of plastoquinone redox state. We asked whether CSK is also involved in regulation of absorbed light energy distribution by phosphorylation of light-harvesting complex II (LHC II. Chloroplast thylakoid membranes isolated from a CSK T-DNA insertion mutant and from wild-type Arabidopsis thaliana exhibit similar light- and redox-induced (32P-labelling of LHC II and changes in 77 K chlorophyll fluorescence emission spectra, while room-temperature chlorophyll fluorescence emission transients from Arabidopsis leaves are perturbed by inactivation of CSK. The results indicate indirect, pleiotropic effects of reaction centre gene transcription on regulation of photosynthetic light-harvesting in vivo. A single, direct redox signal is transmitted separately to discrete transcriptional and post-translational branches of an integrated cytoplasmic regulatory system.

  16. Phenotypic landscape inference reveals multiple evolutionary paths to C4 photosynthesis.

    Science.gov (United States)

    Williams, Ben P; Johnston, Iain G; Covshoff, Sarah; Hibberd, Julian M

    2013-09-28

    C4 photosynthesis has independently evolved from the ancestral C3 pathway in at least 60 plant lineages, but, as with other complex traits, how it evolved is unclear. Here we show that the polyphyletic appearance of C4 photosynthesis is associated with diverse and flexible evolutionary paths that group into four major trajectories. We conducted a meta-analysis of 18 lineages containing species that use C3, C4, or intermediate C3-C4 forms of photosynthesis to parameterise a 16-dimensional phenotypic landscape. We then developed and experimentally verified a novel Bayesian approach based on a hidden Markov model that predicts how the C4 phenotype evolved. The alternative evolutionary histories underlying the appearance of C4 photosynthesis were determined by ancestral lineage and initial phenotypic alterations unrelated to photosynthesis. We conclude that the order of C4 trait acquisition is flexible and driven by non-photosynthetic drivers. This flexibility will have facilitated the convergent evolution of this complex trait. DOI:http://dx.doi.org/10.7554/eLife.00961.001.

  17. Differential freezing resistance and photoprotection in C3 and C4 eudicots and grasses.

    Science.gov (United States)

    Liu, Mei-Zhen; Osborne, Colin P

    2013-05-01

    Globally, C4 plants dominate hot, open environments, but this general pattern is underpinned by important differences in the biogeography of C4 lineages. In particular, the species richness of C4 Poaceae (grasses) increases strongly with increasing temperature, whereas that of the major C4 eudicot group Chenopodiaceae correlates positively with aridity. Freezing tolerance is a crucial determinant of biogeographical relationships with temperature and is mediated by photodamage and cellular disruption by desiccation, but little is known about differences between C4 families. This study hypothesized that there is a greater risk of freezing damage via these mechanisms in C4 Poaceae than Chenopodiaceae, that freezing protection differs between the taxonomic groups, and that freezing tolerance of species is linked to arid habitat preference. Chlorophyll fluorescence, water relations, and freezing injury were compared in four C3 and six C4 species of Poaceae and Chenopodiaceae from the same Mongolian flora. Contrary to expectations, freezing-induced leaf mortality and photodamage were lower in Poaceae than Chenopodiaceae species, and unrelated to photosynthetic pathway. The freezing resistance of Poaceae species resulted from constitutive protection and cold acclimation and an ability to protect the photosynthetic apparatus from photodamage. Freezing protection was associated with low osmotic potential and low tissue elasticity, and freezing damage was accompanied by electrolyte leakage, consistent with cell-membrane disruption by ice. Both Chenopodiaceae and Poaceae had the potential to develop cold acclimation and withstand freezing during the growing season, which conflicted with the hypothesis. Instead, freezing tolerance was more closely associated with life history and ecological preference in these Mongolian species. PMID:23599273

  18. C4 photosynthesis promoted species diversification during the Miocene grassland expansion.

    Directory of Open Access Journals (Sweden)

    Elizabeth L Spriggs

    Full Text Available Identifying how organismal attributes and environmental change affect lineage diversification is essential to our understanding of biodiversity. With the largest phylogeny yet compiled for grasses, we present an example of a key physiological innovation that promoted high diversification rates. C4 photosynthesis, a complex suite of traits that improves photosynthetic efficiency under conditions of drought, high temperatures, and low atmospheric CO2, has evolved repeatedly in one lineage of grasses and was consistently associated with elevated diversification rates. In most cases there was a significant lag time between the origin of the pathway and subsequent radiations, suggesting that the 'C4 effect' is complex and derives from the interplay of the C4 syndrome with other factors. We also identified comparable radiations occurring during the same time period in C3 Pooid grasses, a diverse, cold-adapted grassland lineage that has never evolved C4 photosynthesis. The mid to late Miocene was an especially important period of both C3 and C4 grass diversification, coincident with the global development of extensive, open biomes in both warm and cool climates. As is likely true for most "key innovations", the C4 effect is context dependent and only relevant within a particular organismal background and when particular ecological opportunities became available.

  19. Short-term regulation and alternative pathways of photosynthetic electron transport in Hibiscus rosa-sinensis leaves.

    Science.gov (United States)

    Trubitsin, Boris V; Vershubskii, Alexey V; Priklonskii, Vladimir I; Tikhonov, Alexander N

    2015-11-01

    In this work, using the EPR and PAM-fluorometry methods, we have studied induction events of photosynthetic electron transport in Hibiscus rosa-sinensis leaves. The methods used are complementary, providing efficient tools for in situ monitoring of P700 redox transients and photochemical activity of photosystem II (PSII). The induction of P700(+) in dark-adapted leaves is characterized by the multiphase kinetics with a lag-phase, which duration elongates with the dark-adaptation time. Analyzing effects of the uncoupler monensin and artificial electron carrier methylviologen (MV) on photooxidation of P700 and slow induction of chlorophyll a fluorescence (SIF), we could ascribe different phases of transient kinetics of electron transport processes in dark-adapted leaves to the following regulatory mechanisms: (i) acceleration of electron transfer on the acceptor side of PSI, (ii) pH-dependent modulation of the intersystem electron flow, and (iii) re-distribution of electron fluxes between alternative (linear, cyclic, and pseudocyclic) pathways. Monensin significantly decreases a level of P700(+) and inhibits SIF. MV, which mediates electron flow from PSI to O2 with consequent formation of H2O2, promotes a rapid photooxidation of P700 without any lag-phase peculiar to untreated leaves. MV-mediated water-water cycle (H2O→PSII→PSI→MV→O2→H2O2→H2O) is accompanied by generation of ascorbate free radicals. This suggests that the ascorbate peroxidase system of defense against reactive oxygen species is active in chloroplasts of H. rosa-sinensis leaves. In DCMU-treated chloroplasts with inhibited PSII, the contribution of cyclic electron flow is insignificant as compared to linear electron flow. For analysis of induction events, we have simulated electron transport processes within the framework of our generalized mathematical model of oxygenic photosynthesis, which takes into account pH-dependent mechanisms of electron transport control and re-distribution of

  20. Most photorespiratory genes are preferentially expressed in the bundle sheath cells of the C4 grass Sorghum bicolor.

    Science.gov (United States)

    Döring, Florian; Streubel, Monika; Bräutigam, Andrea; Gowik, Udo

    2016-05-01

    One of the hallmarks of C4 plants is the division of labor between two different photosynthetic cell types, the mesophyll and the bundle sheath cells. C4 plants are of polyphyletic origin and, during the evolution of C4 photosynthesis, the expression of thousands of genes was altered and many genes acquired a cell type-specific or preferential expression pattern. Several lines of evidence, including computational modeling and physiological and phylogenetic analyses, indicate that alterations in the expression of a key photorespiration-related gene, encoding the glycine decarboxylase P subunit, was an early and important step during C4 evolution. Restricting the expression of this gene to the bundle sheath led to the establishment of a photorespiratory CO2 pump. We were interested in whether the expression of genes related to photorespiration remains bundle sheath specific in a fully optimized C4 species. Therefore we analyzed the expression of photorespiratory and C4 cycle genes using RNA in situ hybridization and transcriptome analysis of isolated mesophyll and bundle sheath cells in the C4 grass Sorghum bicolor It turns out that the C4 metabolism of Sorghum is based solely on the NADP-dependent malic enzyme pathway. The majority of photorespiratory gene expression, with some important exceptions, is restricted to the bundle sheath. PMID:26976818

  1. The chloroplast signal recognition particle (CpSRP) pathway as a tool to minimize chlorophyll antenna size and maximize photosynthetic productivity.

    Science.gov (United States)

    Kirst, Henning; Melis, Anastasios

    2014-01-01

    The concept of the Truncated Light-harvesting chlorophyll Antenna (TLA) size, as a tool by which to maximize sunlight utilization and photosynthetic productivity in microalgal mass cultures or high-density plant canopies, is discussed. TLA technology is known to improve sunlight-to-product energy conversion efficiencies and is hereby exemplified by photosynthetic productivity estimates of wild type and a TLA strain under simulated mass culture conditions. Recent advances in the generation of TLA-type mutants by targeting genes of the chloroplast signal-recognition particle (CpSRP) pathway, affecting the thylakoid membrane assembly of light-harvesting proteins, are also summarized. Two distinct CpSRP assembly pathways are recognized, one entailing post-translational, the other a co-translational mechanism. Differences between the post-translational and co-translational integration mechanisms are outlined, as these pertain to the CpSRP-mediated assembly of thylakoid membrane protein complexes in higher plants and green microalgae. The applicability of the CpSRP pathway genes in efforts to generate TLA-type strains with enhanced solar energy conversion efficiency in photosynthesis is evaluated.

  2. Glyphosate Resistance of C3 and C4 Weeds under Rising Atmospheric CO2

    Science.gov (United States)

    Fernando, Nimesha; Manalil, Sudheesh; Florentine, Singarayer K.; Chauhan, Bhagirath S.; Seneweera, Saman

    2016-01-01

    The present paper reviews current knowledge on how changes of plant metabolism under elevated CO2 concentrations (e[CO2]) can affect the development of the glyphosate resistance of C3 and C4 weeds. Among the chemical herbicides, glyphosate, which is a non-selective and post-emergence herbicide, is currently the most widely used herbicide in global agriculture. As a consequence, glyphosate resistant weeds, particularly in major field crops, are a widespread problem and are becoming a significant challenge to future global food production. Of particular interest here it is known that the biochemical processes involved in photosynthetic pathways of C3 and C4 plants are different, which may have relevance to their competitive development under changing environmental conditions. It has already been shown that plant anatomical, morphological, and physiological changes under e[CO2] can be different, based on (i) the plant’s functional group, (ii) the available soil nutrients, and (iii) the governing water status. In this respect, C3 species are likely to have a major developmental advantage under a CO2 rich atmosphere, by being able to capitalize on the overall stimulatory effect of e[CO2]. For example, many tropical weed grass species fix CO2 from the atmosphere via the C4 photosynthetic pathway, which is a complex anatomical and biochemical variant of the C3 pathway. Thus, based on our current knowledge of CO2 fixing, it would appear obvious that the development of a glyphosate-resistant mechanism would be easier under an e[CO2] in C3 weeds which have a simpler photosynthetic pathway, than for C4 weeds. However, notwithstanding this logical argument, a better understanding of the biochemical, genetic, and molecular measures by which plants develop glyphosate resistance and how e[CO2] affects these measures will be important before attempting to innovate sustainable technology to manage the glyphosate-resistant evolution of weeds under e[CO2]. Such information will be

  3. Glyphosate Resistance of C3 and C4 Weeds under Rising Atmospheric CO2.

    Science.gov (United States)

    Fernando, Nimesha; Manalil, Sudheesh; Florentine, Singarayer K; Chauhan, Bhagirath S; Seneweera, Saman

    2016-01-01

    The present paper reviews current knowledge on how changes of plant metabolism under elevated CO2 concentrations (e[CO2]) can affect the development of the glyphosate resistance of C3 and C4 weeds. Among the chemical herbicides, glyphosate, which is a non-selective and post-emergence herbicide, is currently the most widely used herbicide in global agriculture. As a consequence, glyphosate resistant weeds, particularly in major field crops, are a widespread problem and are becoming a significant challenge to future global food production. Of particular interest here it is known that the biochemical processes involved in photosynthetic pathways of C3 and C4 plants are different, which may have relevance to their competitive development under changing environmental conditions. It has already been shown that plant anatomical, morphological, and physiological changes under e[CO2] can be different, based on (i) the plant's functional group, (ii) the available soil nutrients, and (iii) the governing water status. In this respect, C3 species are likely to have a major developmental advantage under a CO2 rich atmosphere, by being able to capitalize on the overall stimulatory effect of e[CO2]. For example, many tropical weed grass species fix CO2 from the atmosphere via the C4 photosynthetic pathway, which is a complex anatomical and biochemical variant of the C3 pathway. Thus, based on our current knowledge of CO2 fixing, it would appear obvious that the development of a glyphosate-resistant mechanism would be easier under an e[CO2] in C3 weeds which have a simpler photosynthetic pathway, than for C4 weeds. However, notwithstanding this logical argument, a better understanding of the biochemical, genetic, and molecular measures by which plants develop glyphosate resistance and how e[CO2] affects these measures will be important before attempting to innovate sustainable technology to manage the glyphosate-resistant evolution of weeds under e[CO2]. Such information will be of

  4. Glyphosate Resistance of C3 and C4 Weeds under Rising Atmospheric CO2.

    Science.gov (United States)

    Fernando, Nimesha; Manalil, Sudheesh; Florentine, Singarayer K; Chauhan, Bhagirath S; Seneweera, Saman

    2016-01-01

    The present paper reviews current knowledge on how changes of plant metabolism under elevated CO2 concentrations (e[CO2]) can affect the development of the glyphosate resistance of C3 and C4 weeds. Among the chemical herbicides, glyphosate, which is a non-selective and post-emergence herbicide, is currently the most widely used herbicide in global agriculture. As a consequence, glyphosate resistant weeds, particularly in major field crops, are a widespread problem and are becoming a significant challenge to future global food production. Of particular interest here it is known that the biochemical processes involved in photosynthetic pathways of C3 and C4 plants are different, which may have relevance to their competitive development under changing environmental conditions. It has already been shown that plant anatomical, morphological, and physiological changes under e[CO2] can be different, based on (i) the plant's functional group, (ii) the available soil nutrients, and (iii) the governing water status. In this respect, C3 species are likely to have a major developmental advantage under a CO2 rich atmosphere, by being able to capitalize on the overall stimulatory effect of e[CO2]. For example, many tropical weed grass species fix CO2 from the atmosphere via the C4 photosynthetic pathway, which is a complex anatomical and biochemical variant of the C3 pathway. Thus, based on our current knowledge of CO2 fixing, it would appear obvious that the development of a glyphosate-resistant mechanism would be easier under an e[CO2] in C3 weeds which have a simpler photosynthetic pathway, than for C4 weeds. However, notwithstanding this logical argument, a better understanding of the biochemical, genetic, and molecular measures by which plants develop glyphosate resistance and how e[CO2] affects these measures will be important before attempting to innovate sustainable technology to manage the glyphosate-resistant evolution of weeds under e[CO2]. Such information will be of

  5. 超高产杂交稻剑叶中C4途径酶活性和稳定碳同位素分异作用的变化%Changes in the Activities of C4 Pathway Enzymes and Stable Carbon Isotope Discrimination in Flag Leaves of Super High-yield Hybrid Rice

    Institute of Scientific and Technical Information of China (English)

    阳成伟; 林桂珠; 彭长连; 陈贻竹; 欧志英

    2003-01-01

    以超高产杂交水稻(Oryza sativa L.)"培矮64S/E32"和多年来大面积推广的杂交稻"汕优63"为材料,研究孕穗后剑叶中C4途径酶和对稳定碳同位素分异作用的变化.结果表明,籽粒灌浆期(移栽后68~75 d)的两个品种剑叶中NADP-MDH活性最高,随后下降;超高产杂交水稻"培矮64S/E32"的NADP-MDH的活性明显高于"汕优63";PEPCase和NADP-ME活性在黄熟期之前的叶片中持续上升.不同生育期的叶片与籽粒的△1aC值相近(19.49‰~19.82‰),在成熟期时较高.超高产水稻"培矮64S/E32"叶片的平均△13C值比"汕优63"高0.43‰.%Activities of several key enzymes of C4 photosynthesis pathway and stable carbon isotope discrimination were investigated in flag leaves of a super high-yield hybrid rice (Oryza sativa L.) cv. Peiai 64S/E32 and a traditional hybrid rice cv. Shanyou 63 at different developing stages. Results show that the activity of PEP carboxylase (PEPCase) increased with age of flag leave; the activity of NADP-malate dehydrogenase (NADP-MDH) increased and reached to a peak value at grain filling stage (68-75 d after transplanting), then fell down; the activity of NADP-MDH in cv. Peiai 64S/E32 was much higher than that in cv. Shanyou 63. Before ripening stage (95 d after transplanting), NADP-malic enzyme activity rose gradually. The level of stable carbon isotope discrimination (△13C) in flag leaves and grains at different developing stages were similar and exhibited a comparative high value at ripening stage. The average △13C in leaf of cv. Peiai 64S/E32 during different developing stages was 0.43‰ more than that in cv. Shanyou 63.

  6. PSI Mehler reaction is the main alternative photosynthetic electron pathway in Symbiodinium sp., symbiotic dinoflagellates of cnidarians.

    Science.gov (United States)

    Roberty, Stéphane; Bailleul, Benjamin; Berne, Nicolas; Franck, Fabrice; Cardol, Pierre

    2014-10-01

    Photosynthetic organisms have developed various photoprotective mechanisms to cope with exposure to high light intensities. In photosynthetic dinoflagellates that live in symbiosis with cnidarians, the nature and relative amplitude of these regulatory mechanisms are a matter of debate. In our study, the amplitude of photosynthetic alternative electron flows (AEF) to oxygen (chlororespiration, Mehler reaction), the mitochondrial respiration and the Photosystem I (PSI) cyclic electron flow were investigated in strains belonging to three clades (A1, B1 and F1) of Symbiodinium. Cultured Symbiodinium strains were maintained under identical environmental conditions, and measurements of oxygen evolution, fluorescence emission and absorption changes at specific wavelengths were used to evaluate PSI and PSII electron transfer rates (ETR). A light- and O2 -dependent ETR was observed in all strains. This electron transfer chain involves PSII and PSI and is insensitive to inhibitors of mitochondrial activity and carbon fixation. We demonstrate that in all strains, the Mehler reaction responsible for photoreduction of oxygen by the PSI under high light, is the main AEF at the onset and at the steady state of photosynthesis. This sustained photosynthetic AEF under high light intensities acts as a photoprotective mechanism and leads to an increase of the ATP/NADPH ratio.

  7. PSI Mehler reaction is the main alternative photosynthetic electron pathway in Symbiodinium sp., symbiotic dinoflagellates of cnidarians.

    Science.gov (United States)

    Roberty, Stéphane; Bailleul, Benjamin; Berne, Nicolas; Franck, Fabrice; Cardol, Pierre

    2014-10-01

    Photosynthetic organisms have developed various photoprotective mechanisms to cope with exposure to high light intensities. In photosynthetic dinoflagellates that live in symbiosis with cnidarians, the nature and relative amplitude of these regulatory mechanisms are a matter of debate. In our study, the amplitude of photosynthetic alternative electron flows (AEF) to oxygen (chlororespiration, Mehler reaction), the mitochondrial respiration and the Photosystem I (PSI) cyclic electron flow were investigated in strains belonging to three clades (A1, B1 and F1) of Symbiodinium. Cultured Symbiodinium strains were maintained under identical environmental conditions, and measurements of oxygen evolution, fluorescence emission and absorption changes at specific wavelengths were used to evaluate PSI and PSII electron transfer rates (ETR). A light- and O2 -dependent ETR was observed in all strains. This electron transfer chain involves PSII and PSI and is insensitive to inhibitors of mitochondrial activity and carbon fixation. We demonstrate that in all strains, the Mehler reaction responsible for photoreduction of oxygen by the PSI under high light, is the main AEF at the onset and at the steady state of photosynthesis. This sustained photosynthetic AEF under high light intensities acts as a photoprotective mechanism and leads to an increase of the ATP/NADPH ratio. PMID:24975027

  8. Quo vadis C(4)? An ecophysiological perspective on global change and the future of C(4) plants.

    Science.gov (United States)

    Sage, Rowan F; Kubien, David S

    2003-01-01

    C(4) plants are directly affected by all major global change parameters, often in a manner that is distinct from that of C(3) plants. Rising CO(2) generally stimulates C(3) photosynthesis more than C(4), but C(4) species still exhibit positive responses, particularly at elevated temperature and arid conditions where they are currently common. Acclimation of photosynthesis to high CO(2) occurs in both C(3) and C(4) plants, most notably in nutrient-limited situations. High CO(2) aggravates nitrogen limitations and in doing so may favor C(4) species, which have greater photosynthetic nitrogen use efficiency. C(4) photosynthesis is favored by high temperature, but global warming will not necessarily favor C(4) over C(3) plants because the timing of warming could be more critical than the warming itself. C(3) species will likely be favored where harsh winter climates are moderated, particularly where hot summers also become drier and less favorable to C(4) plant growth. Eutrophication of soils by nitrogen deposition generally favors C(3) species by offsetting the superior nitrogen use efficiency of C(4) species; this should allow C(3) species to expand at the expense of C(4) plants. Land-use change and biotic invasions are also important global change factors that affect the future of C(4) plants. Human exploitation of forested landscapes favors C(4) species at low latitude by removing woody competitors and opening gaps in which C(4) grasses can establish. Invasive C(4) grasses are causing widespread forest loss in Asia, the Americas and Oceania by accelerating fire cycles and reducing soil nutrient status. Once established, weedy C(4) grasses can prevent woodland establishment, and thus arrest ecological succession. In sum, in the future, certain C(4) plants will prosper at the expense of C(3) species, and should be able to adjust to the changes the future brings. PMID:16228377

  9. Responses of carbon isotope discrimination in C4 plant to variable N and water supply

    Science.gov (United States)

    Yang, Hao; Li, Shenggong

    2016-04-01

    Understanding variations and underlying mechanisms of carbon isotope discrimination (Δ) in C4 species is critical for predicting the effects of change in C3/C4 ratio of plant community on ecosystem processes and functionning. However, little is known about the effects of soil resource gradients on Δ of C4 plants. To address Δ responses to drought and nitrogen supply, the leaf carbon isotope composition, bundle sheath leakiness (BLS), and leaf gas exchange (A, gs, Ci/Ca) were measured on Cleistogenes squarrosa, a dominant C4 species in the Inner Mongolia grassland. C. squarrosa were grown in controlled-environment pots from seed under a combination of water and N supply. High N availability and drought stimulated photosynthetic rate (A) and further decreased the ratio of internal and ambient CO2 concentrations (Ci/Ca) through increasing leaf N content. BLS was higher under high N supply and was unchanged by drought. There was significant interaction between N and water supply to affect BLS and Ci/Ca. Δ was negatively related to Ci/Ca and was positively related to BLS. Tradeoff between the responses of BLS and Ci/Ca to changing environmental conditions kept leaf Δ relatively stable, which was also supported by a field N addition experiment. Our results suggested leaf Δ of C4 plant was unchanged under variable water and N environment conditions although the operating efficiency of C4 pathway and CO2 concentration in photosynthesis were changed. Our findings have implications for predicting the change of C3/C4 ratio of plant community and understanding ecosystem processes and functionning.

  10. Progress in the remote sensing of C3 and C4 grass species aboveground biomass over time and space

    Science.gov (United States)

    Shoko, Cletah; Mutanga, Onisimo; Dube, Timothy

    2016-10-01

    The remote sensing of grass aboveground biomass (AGB) has gained considerable attention, with substantial research being conducted in the past decades. Of significant importance is their photosynthetic pathways (C3 and C4), which epitomizes a fundamental eco-physiological distinction of grasses functional types. With advances in technology and the availability of remotely sensed data at different spatial, spectral, radiometric and temporal resolutions, coupled with the need for detailed information on vegetation condition, the monitoring of C3 and C4 grasses AGB has received renewed attention, especially in the light of global climate change, biodiversity and, most importantly, food security. This paper provides a detailed survey on the progress of remote sensing application in determining C3 and C4 grass species AGB. Importantly, the importance of species functional type is highlighted in conjunction with the availability and applicability of different remote sensing datasets, with refined resolutions, which provide an opportunity to monitor C3 and C4 grasses AGB. While some progress has been made, this review has revealed the need for further remote sensing studies to model the seasonal (cyclical) variability, as well as long-term AGB changes in C3 and C4 grasses, in the face of climate change and food security. Moreover, the findings of this study have shown the significance of shifting towards the application of advanced statistical models, to further improve C3 and C4 grasses AGB estimation accuracy.

  11. Preference for C4 shade grasses increases hatchling performance in the butterfly, Bicyclus safitza.

    Science.gov (United States)

    Nokelainen, Ossi; Ripley, Brad S; van Bergen, Erik; Osborne, Colin P; Brakefield, Paul M

    2016-08-01

    The Miocene radiation of C4 grasses under high-temperature and low ambient CO 2 levels occurred alongside the transformation of a largely forested landscape into savanna. This inevitably changed the host plant regime of herbivores, and the simultaneous diversification of many consumer lineages, including Bicyclus butterflies in Africa, suggests that the radiations of grasses and grazers may be evolutionary linked. We examined mechanisms for this plant-herbivore interaction with the grass-feeding Bicyclus safitza in South Africa. In a controlled environment, we tested oviposition preference and hatchling performance on local grasses with C3 or C4 photosynthetic pathways that grow either in open or shaded habitats. We predicted preference for C3 plants due to a hypothesized lower processing cost and higher palatability to herbivores. In contrast, we found that females preferred C4 shade grasses rather than either C4 grasses from open habitats or C3 grasses. The oviposition preference broadly followed hatchling performance, although hatchling survival was equally good on C4 or C3 shade grasses. This finding was explained by leaf toughness; shade grasses were softer than grasses from open habitats. Field monitoring revealed a preference of adults for shaded habitats, and stable isotope analysis of field-sampled individuals confirmed their preference for C4 grasses as host plants. Our findings suggest that plant-herbivore interactions can influence the direction of selection in a grass-feeding butterfly. Based on this work, we postulate future research to test whether these interactions more generally contribute to radiations in herbivorous insects via expansions into new, unexploited ecological niches. PMID:27551380

  12. Engineering of a modular and synthetic phosphoketolase pathway for photosynthetic production of acetone from CO2 in Synechococcus elongatus PCC 7942 under light and aerobic condition.

    Science.gov (United States)

    Chwa, Jun-Won; Kim, Wook Jin; Sim, Sang Jun; Um, Youngsoon; Woo, Han Min

    2016-08-01

    Capture and conversion of CO2 to valuable chemicals is intended to answer global challenges on environmental issues, climate change and energy security. Engineered cyanobacteria have been enabled to produce industry-relevant chemicals from CO2 . However, the final products from cyanobacteria have often been mixed with fermented metabolites during dark fermentation. In this study, our engineering of Synechococcus elongatus PCC 7942 enabled continuous conversion of CO2 to volatile acetone as sole product. This process occurred during lighted, aerobic culture via both ATP-driven malonyl-CoA synthesis pathway and heterologous phosphoketolase (PHK)-phosphotransacetylase (Pta) pathway. Because of strong correlations between the metabolic pathways of acetate and acetone, supplying the acetyl-CoA directly from CO2 in the engineered strain, led to sole production of acetone (22.48 mg/L ± 1.00) without changing nutritional constraints, and without an anaerobic shift. Our engineered S. elongatus strains, designed for acetone production, could be modified to create biosolar cell factories for sustainable photosynthetic production of acetyl-CoA-derived biochemicals. PMID:26879003

  13. Carbon isotopes and water use efficiency in C4 plants.

    Science.gov (United States)

    Ellsworth, Patrick Z; Cousins, Asaph B

    2016-06-01

    Drought is a major agricultural problem worldwide. Therefore, selection for increased water use efficiency (WUE) in food and biofuel crop species will be an important trait in plant breeding programs. The leaf carbon isotopic composition (δ(13)Cleaf) has been suggested to serve as a rapid and effective high throughput phenotyping method for WUE in both C3 and C4 species. This is because WUE, leaf carbon discrimination (Δ(13)Cleaf), and δ(13)Cleaf are correlated through their relationships with intercellular to ambient CO2 partial pressures (Ci/Ca). However, in C4 plants, changing environmental conditions may influence photosynthetic efficiency (bundle-sheath leakiness) and post-photosynthetic fractionation that will potentially alter the relationship between δ(13)Cleaf and Ci/Ca. Here we discuss how these factors influence the relationship between δ(13)Cleaf and WUE, and the potential of using δ(13)Cleaf as a meaningful proxy for WUE.

  14. Thermochemistry of disputed soot formation intermediates C4H3 and C4H5

    Science.gov (United States)

    Wheeler, Steven E.; Allen, Wesley D.; Schaefer, Henry F.

    2004-11-01

    Accurate isomeric energy differences and standard enthalpies of formation for disputed intermediates in soot formation, C4H3 and C4H5, have been determined through systematic extrapolations of ab initio energies. Electron correlation has been included through second-order Z-averaged perturbation theory (ZAPT2), and spin-restricted, open-shell coupled-cluster methods through triple excitations [ROCCSD, ROCCSD(T), and ROCCSDT] utilizing the correlation-consistent hierarchy of basis sets, cc-pVXZ (X=D, T, Q, 5, and 6), followed by extrapolations to the complete basis set limit via the focal point method of Allen and co-workers. Reference geometries were fully optimized at the ROCCSD(T) level with a TZ(2d1f,2p1d) basis set. Our analysis finds that the resonance-stabilized i-C4H3 and i-C4H5 isomers lie 11.8 and 10.7 kcal mol-1 below E-n-C4H3 and E-n-C4H5, respectively, several kcal mol-1 (more, less) than reported in recent (diffusion Monte Carlo, B3LYP density-functional) studies. Moreover, in these systems Gaussian-3 (G3) theory suffers from large spin contamination in electronic wave functions, poor reference geometries, and anomalous vibrational frequencies, but fortuitous cancellation of these sizable errors leads to isomerization energies apparently accurate to 1 kcal mol-1. Using focal-point extrapolations for isodesmic reactions, we determine the enthalpies of formation (ΔfH0∘) for i-C4H3, Z-n-C4H3, E-n-C4H3, i-C4H5, Z-n-C4H5, and E-n-C4H5 to be 119.0, 130.8, 130.8, 78.4, 89.7, and 89.1 kcal mol-1, respectively. These definitive values remove any remaining uncertainty surrounding the thermochemistry of these isomers in combustion models, allowing for better assessment of whether even-carbon pathways contribute to soot formation.

  15. Balanced {C_4, C_5}-Quatrefoil Systems

    OpenAIRE

    Ushio, Kazuhiko

    2004-01-01

    In graph theory, the decomposition problems of graphs are very important topics. Various types of decompositions of many graphs can be seen in the literature of gaph theory. We give the necessary and sufficient condition for the existence of a balanced {C_4, C_5}-quatrefoil decomposition of K_n for each of (C_4, C_4, C_4, C_4)-quatrefoil, (C_4, C_4, C_4, C_5)-quatrefoil, (C_4, C_4, C_5, C_5)-quatrefoil, (C_4, C_5, C_5, C_5)-quatrefoil, and (C_5, C_5, C_5, C_5)-quatrefoil. These decompositions...

  16. Differential expressed genes of p53 signaling pathway in prostate cancer cell lines LNCaP and C4-2 screened by microarray technology%基因芯片筛选LNCaP与C4-2细胞中P53信号通路相关差异表达基因

    Institute of Scientific and Technical Information of China (English)

    金桂花; 王丽娟; 朱青; 周侠; 李萌; 白娥

    2014-01-01

    目的 运用基因芯片筛选雄激素依赖性前列腺癌细胞系LNCaP与雄激素非依赖性前列腺癌细胞系C4-2中p53信号通路相关差异表达基因,寻找去势抵抗性前列腺癌的可能发生机制.方法 体外培养前列腺癌细胞系LN-CaP和C4-2,TRIzol试剂提取两种细胞的总RNA并纯化,按Agilent芯片说明对总RNA进行杂交,所得荧光信号采用Aligent Scanner、Imagene和Genespring软件进行分析和显示.结果 以LNCaP为对照,C4-2细胞中3组均表达差异的基因共417个,上调基因301个,下调基因116个.KEGG转录域覆盖率分析显示,差异表达基因中与p53信号通路相关的占9.3%;p53信号通路中表达差异的基因分别为ATR、p21、CDK4/6、CyclinE、Gadd45、PIGs、CytC、IGF-BP3、TSP1、p53R2、Sestrins和CyclinG,其中p21、CDK4/6、CyclinE的表达差异最显著.结论 筛选出在LNCaP和C4-2细胞系p53信号通路中差异表达基因12个,其中p21、CDK4/6、CyclinE可能参与了CRPC的发生发展,为进一步研究前列腺癌的进展机制奠定了基础.

  17. Bundle Sheath Leakiness and Light Limitation during C4 Leaf and Canopy CO2 Uptake1[W][OA

    Science.gov (United States)

    Kromdijk, Johannes; Schepers, Hans E.; Albanito, Fabrizio; Fitton, Nuala; Carroll, Faye; Jones, Michael B.; Finnan, John; Lanigan, Gary J.; Griffiths, Howard

    2008-01-01

    Perennial species with the C4 pathway hold promise for biomass-based energy sources. We have explored the extent that CO2 uptake of such species may be limited by light in a temperate climate. One energetic cost of the C4 pathway is the leakiness (φ) of bundle sheath tissues, whereby a variable proportion of the CO2, concentrated in bundle sheath cells, retrodiffuses back to the mesophyll. In this study, we scale φ from leaf to canopy level of a Miscanthus crop (Miscanthus × giganteus hybrid) under field conditions and model the likely limitations to CO2 fixation. At the leaf level, measurements of photosynthesis coupled to online carbon isotope discrimination showed that leaves within a 3.3-m canopy (leaf area index = 8.3) show a progressive increase in both carbon isotope discrimination and φ as light decreases. A similar increase was observed at the ecosystem scale when we used eddy covariance net ecosystem CO2 fluxes, together with isotopic profiles, to partition photosynthetic and respiratory isotopic flux densities (isofluxes) and derive canopy carbon isotope discrimination as an integrated proxy for φ at the canopy level. Modeled values of canopy CO2 fixation using leaf-level measurements of φ suggest that around 32% of potential photosynthetic carbon gain is lost due to light limitation, whereas using φ determined independently from isofluxes at the canopy level the reduction in canopy CO2 uptake is estimated at 14%. Based on these results, we identify φ as an important limitation to CO2 uptake of crops with the C4 pathway. PMID:18971428

  18. Analysis of gene expression and histone modification between C4 and non-C4 homologous genes of PPDK and PCK in maize.

    Science.gov (United States)

    Dong, Xiu-Mei; Li, Yuan; Chao, Qing; Shen, Jie; Gong, Xiu-Jie; Zhao, Biligen-Gaowa; Wang, Bai-Chen

    2016-07-01

    More efficient photosynthesis has allowed C4 plants to adapt to more diverse ecosystems (such as hot and arid conditions) than C3 plants. To better understand C4 photosynthesis, we investigated the expression patterns of C4 genes (C4PPDK and PCK1) and their non-C4 homologous genes (CyPPDK1, CyPPDK2, and PCK2) in the different organs of maize (Zea mays). Both C4 genes and non-C4 genes showed organ-dependent expression patterns. The mRNA levels of C4 genes were more abundant in leaf organ than in seeds at 25 days after pollination (DAP), while non-C4 genes were mainly expressed in developing seeds. Further, acetylation of histone H3 lysine 9 (H3K9ac) positively correlates with mRNA levels of C4 genes (C4PPDK and PCK1) in roots, stems, leaves, and seeds at 25 DAP, acetylation of histone H4 lysine 5 (H4K5ac) in the promoter regions of both C4 (C4PPDK and PCK1) and non-C4 genes (CyPPDK1, CyPPDK2, and PCK2) correlated well with their transcripts abundance in stems. In photosynthetic organs (stems and leaves), dimethylation of histone H3 lysine 9 (H3K9me2) negatively correlated with mRNA levels of both C4 and non-C4 genes. Taken together, our data suggest that histone modification was involved in the transcription regulation of both C4 genes and non-C4 genes, which might provide a clue of the functional evolution of C4 genes. PMID:27161567

  19. Progress on photosynthetic carbon metabolism types in marine macroalgae%大型海藻光合碳代谢类型的研究进展

    Institute of Scientific and Technical Information of China (English)

    芦笛

    2013-01-01

    As a part of marine algae, marine macroalgae, whose edible and medicinal values are widely applied, participate in global CO2 and O2 turnover through photosynthesis. Therefore, when viewed from ecology as well as economics, the process of photosynthetic CO2 fixation and metabolism in marine macroalgae is of great significance. Up to the present, metabonomics and enzymology researches on photosynthetic carbon metabolism in marine macroalgae have proved the existence of the PEPCK-or PEPC-type C4 pathway as well as the CAM pathway in addition to the C3 pathway, although the integrality of the pathways is still unknown. Moreover, the results of photosynthetic gas exchange indicate that the photosynthetic carbon metabolism pathway in macroalgae performs the C4-like type on the whole. This situation resembles some terrestrial C3 plants with additional C4 pathway. Therefore, researches on photosynthetic carbon metabolism pathways in macroalgae remain to be explored in depth in the future.%作为海洋藻类的一部分,大型海藻通过光合作用参与了海洋对全球CO2和O2的周转,其食用和药用价值也得到了广泛应用。因此无论从生态还是经济角度来看,研究大型海藻通过光合作用对CO2进行固定和代谢的过程都具有重要意义。到目前为止,世界上对大型海藻光合碳代谢途径的研究从代谢组学和酶学角度证明了大型海藻体内除了C3途径外,还同时存在不能确定完整与否的PEPCK或PEPC类型的C4途径或CAM途径;光合气体交换的结果显示其光合碳代谢途径从整体上表现出类似C4(C4-like)类型。这种情况与一些体内存在C4途径的陆生C3植物相似。因此大型海藻光合碳代谢途径仍然有待深入研究。

  20. Evolutionary switch and genetic convergence on rbcL following the evolution of C4 photosynthesis.

    Science.gov (United States)

    Christin, Pascal-Antoine; Salamin, Nicolas; Muasya, A Muthama; Roalson, Eric H; Russier, Flavien; Besnard, Guillaume

    2008-11-01

    Rubisco is responsible for the fixation of CO2 into organic compounds through photosynthesis and thus has a great agronomic importance. It is well established that this enzyme suffers from a slow catalysis, and its low specificity results into photorespiration, which is considered as an energy waste for the plant. However, natural variations exist, and some Rubisco lineages, such as in C4 plants, exhibit higher catalytic efficiencies coupled to lower specificities. These C4 kinetics could have evolved as an adaptation to the higher CO2 concentration present in C4 photosynthetic cells. In this study, using phylogenetic analyses on a large data set of C3 and C4 monocots, we showed that the rbcL gene, which encodes the large subunit of Rubisco, evolved under positive selection in independent C4 lineages. This confirms that selective pressures on Rubisco have been switched in C4 plants by the high CO2 environment prevailing in their photosynthetic cells. Eight rbcL codons evolving under positive selection in C4 clades were involved in parallel changes among the 23 independent monocot C4 lineages included in this study. These amino acids are potentially responsible for the C4 kinetics, and their identification opens new roads for human-directed Rubisco engineering. The introgression of C4-like high-efficiency Rubisco would strongly enhance C3 crop yields in the future CO2-enriched atmosphere. PMID:18695049

  1. Evolution of carbonic anhydrase in C4 plants.

    Science.gov (United States)

    Ludwig, Martha

    2016-06-01

    During the evolution of C4 photosynthesis, the intracellular location with most carbonic anhydrase (CA) activity has changed. In Flaveria, the loss of the sequence encoding a chloroplast transit peptide from an ancestral C3 CA ortholog confined the C4 isoform to the mesophyll cell cytosol. Recent studies indicate that sequence elements and histone modifications controlling the expression of C4-associated CAs were likely present in the C3 ancestral chromatin, enabling the evolution of the C4 pathway. Almost complete abolishment of maize CA activity yields no obvious phenotype at ambient CO2 levels. This contrasts with results for Flaveria CA mutants, and has opened discussion on the role of CA in the C4 carbon concentrating mechanism.

  2. Variations in carbon isotope ratios of C_3 plants and distribution of C_4 plants along an altitudinal transect on the eastern slope of Mount Gongga

    Institute of Scientific and Technical Information of China (English)

    LI JiaZhu; WANG GuoAn; LIU XianZhao; HAN JiaMao; LIU Min; LIU XiaoJuan

    2009-01-01

    Variations in carbon isotopic ratios (δ~(13)C) of C_3 plants and distribution of C_4 plants were investigated along an altitudinal transect on the eastern slope of Mount Gongga,and the environmental effects on them were discussed,it is shown that plants with C_4 photosynthetic pathway mainly occur at altitudes below 2100 m a.a.l.,suggesting that the low summer temperature is responsible for the distributional pattern.In addition,δ~(13)C of C_3 plants increases with elevation at the region above 2000 m a.s.l,with the characteristics of humid climate,and the increase rate in δ~(13)C for C_3 plants is about 1.3‰ per kilometer.Temperature determines the altitudinal trend of δ~(13)C.

  3. Variations in carbon isotope ratios of C3 plants and distribution of C4 plants along an altitudinal transect on the eastern slope of Mount Gongga

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Variations in carbon isotopic ratios (δ 13C) of C3 plants and distribution of C4 plants were investigated along an altitudinal transect on the eastern slope of Mount Gongga, and the environmental effects on them were discussed. It is shown that plants with C4 photosynthetic pathway mainly occur at altitudes below 2100 m a.s.l., suggesting that the low summer temperature is responsible for the distributional pattern. In addition, δ 13C of C3 plants increases with elevation at the region above 2000 m a.s.l. with the characteristics of humid climate, and the increase rate in δ 13C for C3 plants is about 1.3‰ per kilometer. Temperature determines the altitudinal trend of δ 13C.

  4. Integration of C4-specific PPDK gene of maize to C3 rice and its characteristics in relation to photosynthesis

    Institute of Scientific and Technical Information of China (English)

    ZHANG Jianfu; Swapan K.Datta; WANG Guoying; XIE Huaan

    2007-01-01

    Pyruvate orthophosphate dikinase (PPDK) is a key enzyme in photosynthesis in some plants that exploit the C4 photosynthetic pathway for the fixation of CO2.The C4-specific PPDK encoding pyruvate orthophosphate dikinase was introduced into C3 plant,a rice (Oryza sativa L.cv.indica IR64) mediated by biolistic and Agrobacterium transformation.The C4-PPDK gene of maize was integrated to indica IR64 with polymerase chain reaction (PCR)-Southern blotting.The total nitrogen of flag leaves of transgenic IR64 was analyzed with Kj eldahl method for quantitative determination of nitrogen,indicating that the total nitrogen of flag leaves of most transgenic IR64 was higher than that of non-transgenic control IR64 formants in the greenhouse.The maximum value of total nitrogen of flag leaves was 3.61% among transgenie IR64 plants,1.07% higher than that of non-transgenic control IR64 formants.The total nitrogen of flag leaves of transgenic IR64 was increased by 42.1%.The factors for yield of transgenic IR64 plants were analyzed,indicating there was a greater difference in yield-forming factors among transgenic IR64 plants in the greenhouse,i.e.dried plant weight,harvested index and so on.Thus,it could help rice breeders select different materials for breeding.

  5. Elements required for an efficient NADP-malic enzyme type C4 photosynthesis.

    Science.gov (United States)

    Wang, Yu; Long, Stephen P; Zhu, Xin-Guang

    2014-04-01

    C4 photosynthesis has higher light, nitrogen, and water use efficiencies than C3 photosynthesis. Although the basic anatomical, cellular, and biochemical features of C4 photosynthesis are well understood, the quantitative significance of each element of C4 photosynthesis to the high photosynthetic efficiency are not well defined. Here, we addressed this question by developing and using a systems model of C4 photosynthesis, which includes not only the Calvin-Benson cycle, starch synthesis, sucrose synthesis, C4 shuttle, and CO₂ leakage, but also photorespiration and metabolite transport between the bundle sheath cells and mesophyll cells. The model effectively simulated the CO₂ uptake rates, and the changes of metabolite concentrations under varied CO₂ and light levels. Analyses show that triose phosphate transport and CO₂ leakage can help maintain a high photosynthetic rate by balancing ATP and NADPH amounts in bundle sheath cells and mesophyll cells. Finally, we used the model to define the optimal enzyme properties and a blueprint for C4 engineering. As such, this model provides a theoretical framework for guiding C4 engineering and studying C4 photosynthesis in general.

  6. Mathematical review of the energy transduction stoichiometries of C4 leaf photosynthesis under limiting light

    NARCIS (Netherlands)

    Yin, X.; Struik, P.C.

    2012-01-01

    A generalized model for electron (e-) transport limited C4 photosynthesis of NAD–malic enzyme and NADP–malic enzyme subtypes is presented. The model is used to review the thylakoid stoichiometries in vivo under strictly limiting light conditions, using published data on photosynthetic quantum yield

  7. Genotypic diversity of complement component C4 does not predict kidney transplant outcome.

    Science.gov (United States)

    Wahrmann, Markus; Döhler, Bernd; Ruhenstroth, Andrea; Haslacher, Helmuth; Perkmann, Thomas; Exner, Markus; Rees, Andrew J; Böhmig, Georg A

    2011-02-01

    Gene copy number of complement component C4, which varies among individuals, may determine the intrinsic strength of the classical complement pathway. Presuming a major role of complement as an effector in transplant rejection, we hypothesized that C4 genetic diversity may partially explain the variation in allograft outcomes. This retrospective study included 1969 deceased-donor kidney transplants randomly selected from the Collaborative Transplant Study DNA bank. We determined recipient and donor gene copy number of total C4, C4 isotypes (C4A and C4B), and C4 gene length variants (C4L and C4S) by quantitative real-time PCR analysis. Groups defined according to recipient C4 gene copy number (low, intermediate, and high) had similar 10-year allograft survival. Genotypic groups showed comparable rates of graft dysfunction, treatment for rejection, immunological graft loss, hospitalization for infection, malignant disease, and death. Similarly, separate analyses of C4A, C4B, C4L, and C4S; combined evaluation of donor and recipient C4 genotype; or analysis of recipients with higher risk for rejection did not reveal considerable outcome effects. In conclusion, we did not demonstrate that C4 gene copy number associates with transplant outcome, and we found no evidence that the resulting variation in the strength of classical complement activation influences susceptibility to rejection.

  8. Identification of Photosynthesis-Associated C4 Candidate Genes through Comparative Leaf Gradient Transcriptome in Multiple Lineages of C3 and C4 Species

    OpenAIRE

    Zehong Ding; Sarit Weissmann; Minghui Wang; Baijuan Du; Lei Huang; Lin Wang; Xiaoyu Tu; Silin Zhong; Christopher Myers; Brutnell, Thomas P.; Qi Sun; Pinghua Li

    2015-01-01

    Leaves of C4 crops usually have higher radiation, water and nitrogen use efficiencies compared to the C3 species. Engineering C4 traits into C3 crops has been proposed as one of the most promising ways to repeal the biomass yield ceiling. To better understand the function of C4 photosynthesis, and to identify candidate genes that are associated with the C4 pathways, a comparative transcription network analysis was conducted on leaf developmental gradients of three C4 species including maize, ...

  9. Interactive Effects of Elevated CO2 and Growth Temperature on the Tolerance of Photosynthesis to Acute Heat Stress in C3 and C4 Species

    Institute of Scientific and Technical Information of China (English)

    E. William Hamilton Ⅲ; Scott A. Heckathorn; Puneet Joshi; Dan Wang; Deepak Barua

    2008-01-01

    Determining effects of elevated CO2 on the tolerance of photosynthesis to acute heat-stress (heat wave) is necessary for predicting plant responses to global warming, as photosynthesis is thermolabile and acute heat-stress and atmospheric CO2 will increase in the future. Few studies have examined this, and past results are variable, which may be due to methodological variation. To address this, we grew two C3 and two C4 species at current or elevated CO2 and three different growth temperatures (GT). We assessed photosynthetic thermotolerance in both unacclimated (basal tolerance) and preheat-stressed (preHS = acclimated) plants. In C3 species, basal thermotolerance of net photosynthesis (Pn) was increased In high CO2, but in C4 species, Pn thermotlerance was decreased by high CO2 (except Zea maya at low GT); CO2 effects in preHS plants were mostly small or absent, though high CO2 was detrimental in one C3 and one C4 species at warmer GT. Though high CO2 generally decreased stomatal conductance, decreases in Pn during heat stress were mostly due to non-stomatal effects. Photosystem II (PSII) efficiency was often decreased by high CO2 during heat stress, especially at high GT; CO2 effects on post-PSll electron transport were variable. Thus, high CO2 often affected photosynthetic theromotolerance, and the effects varied with photosynthetic pathway, growth temperature, and acclimation state. Most importantly, in heat-stressed plants at normal or warmer growth temperatures, high CO2 may often decrease, or not benefit as expected, tolerance of photosynthesis to acute heat stress. Therefore, interactive effects of elevated CO2 and warmer growth temperatures on acute heat tolerance may contribute to future changes in plant productivity, distribution, and diversity.

  10. Bundle Sheath Leakiness and Light Limitation during C-4 Leaf and Canopy CO2 Uptake

    NARCIS (Netherlands)

    Kromdijk, J.; Schepers, H.E.; Albanito, F.; Fitton, N.; Carroll, F.; Jones, M.B.; Finnan, J.; Lanigan, G.J.; Griffiths, H.

    2008-01-01

    Perennial species with the C-4 pathway hold promise for biomass-based energy sources. We have explored the extent that CO2 uptake of such species may be limited by light in a temperate climate. One energetic cost of the C-4 pathway is the leakiness (phi) of bundle sheath tissues, whereby a variable

  11. The evolutionary ecology of C4 plants.

    Science.gov (United States)

    Christin, Pascal-Antoine; Osborne, Colin P

    2014-12-01

    C4 photosynthesis is a physiological syndrome resulting from multiple anatomical and biochemical components, which function together to increase the CO2 concentration around Rubisco and reduce photorespiration. It evolved independently multiple times and C4 plants now dominate many biomes, especially in the tropics and subtropics. The C4 syndrome comes in many flavours, with numerous phenotypic realizations of C4 physiology and diverse ecological strategies. In this work, we analyse the events that happened in a C3 context and enabled C4 physiology in the descendants, those that generated the C4 physiology, and those that happened in a C4 background and opened novel ecological niches. Throughout the manuscript, we evaluate the biochemical and physiological evidence in a phylogenetic context, which demonstrates the importance of contingency in evolutionary trajectories and shows how these constrained the realized phenotype. We then discuss the physiological innovations that allowed C4 plants to escape these constraints for two important dimensions of the ecological niche--growth rates and distribution along climatic gradients. This review shows that a comprehensive understanding of C4 plant ecology can be achieved by accounting for evolutionary processes spread over millions of years, including the ancestral condition, functional convergence via independent evolutionary trajectories, and physiological diversification.

  12. A critical review on the improvement of photosynthetic carbon assimilation in C3 plants using genetic engineering.

    Science.gov (United States)

    Ruan, Cheng-Jiang; Shao, Hong-Bo; Teixeira da Silva, Jaime A

    2012-03-01

    Global warming is one of the most serious challenges facing us today. It may be linked to the increase in atmospheric CO2 and other greenhouse gases (GHGs), leading to a rise in sea level, notable shifts in ecosystems, and in the frequency and intensity of wild fires. There is a strong interest in stabilizing the atmospheric concentration of CO2 and other GHGs by decreasing carbon emission and/or increasing carbon sequestration. Biotic sequestration is an important and effective strategy to mitigate the effects of rising atmospheric CO2 concentrations by increasing carbon sequestration and storage capacity of ecosystems using plant photosynthesis and by decreasing carbon emission using biofuel rather than fossil fuel. Improvement of photosynthetic carbon assimilation, using transgenic engineering, potentially provides a set of available and effective tools for enhancing plant carbon sequestration. In this review, firstly different biological methods of CO2 assimilation in C3, C4 and CAM plants are introduced and three types of C4 pathways which have high photosynthetic performance and have evolved as CO2 pumps are briefly summarized. Then (i) the improvement of photosynthetic carbon assimilation of C3 plants by transgenic engineering using non-C4 genes, and (ii) the overexpression of individual or multiple C4 cycle photosynthetic genes (PEPC, PPDK, PCK, NADP-ME and NADP-MDH) in transgenic C3 plants (e.g. tobacco, potato, rice and Arabidopsis) are highlighted. Some transgenic C3 plants (e.g. tobacco, rice and Arabidopsis) overexpressing the FBP/SBPase, ictB and cytochrome c6 genes showed positive effects on photosynthetic efficiency and growth characteristics. However, over the last 28 years, efforts to overexpress individual, double or multiple C4 enzymes in C3 plants like tobacco, potato, rice, and Arabidopsis have produced mixed results that do not confirm or eliminate the possibility of improving photosynthesis of C3 plants by this approach. Finally, a prospect

  13. Identification of Photosynthesis-Associated C4 Candidate Genes through Comparative Leaf Gradient Transcriptome in Multiple Lineages of C3 and C4 Species.

    Science.gov (United States)

    Ding, Zehong; Weissmann, Sarit; Wang, Minghui; Du, Baijuan; Huang, Lei; Wang, Lin; Tu, Xiaoyu; Zhong, Silin; Myers, Christopher; Brutnell, Thomas P; Sun, Qi; Li, Pinghua

    2015-01-01

    Leaves of C4 crops usually have higher radiation, water and nitrogen use efficiencies compared to the C3 species. Engineering C4 traits into C3 crops has been proposed as one of the most promising ways to repeal the biomass yield ceiling. To better understand the function of C4 photosynthesis, and to identify candidate genes that are associated with the C4 pathways, a comparative transcription network analysis was conducted on leaf developmental gradients of three C4 species including maize, green foxtail and sorghum and one C3 species, rice. By combining the methods of gene co-expression and differentially co-expression networks, we identified a total of 128 C4 specific genes. Besides the classic C4 shuttle genes, a new set of genes associated with light reaction, starch and sucrose metabolism, metabolites transportation, as well as transcription regulation, were identified as involved in C4 photosynthesis. These findings will provide important insights into the differential gene regulation between C3 and C4 species, and a good genetic resource for establishing C4 pathways in C3 crops. PMID:26465154

  14. Identification of Photosynthesis-Associated C4 Candidate Genes through Comparative Leaf Gradient Transcriptome in Multiple Lineages of C3 and C4 Species.

    Directory of Open Access Journals (Sweden)

    Zehong Ding

    Full Text Available Leaves of C4 crops usually have higher radiation, water and nitrogen use efficiencies compared to the C3 species. Engineering C4 traits into C3 crops has been proposed as one of the most promising ways to repeal the biomass yield ceiling. To better understand the function of C4 photosynthesis, and to identify candidate genes that are associated with the C4 pathways, a comparative transcription network analysis was conducted on leaf developmental gradients of three C4 species including maize, green foxtail and sorghum and one C3 species, rice. By combining the methods of gene co-expression and differentially co-expression networks, we identified a total of 128 C4 specific genes. Besides the classic C4 shuttle genes, a new set of genes associated with light reaction, starch and sucrose metabolism, metabolites transportation, as well as transcription regulation, were identified as involved in C4 photosynthesis. These findings will provide important insights into the differential gene regulation between C3 and C4 species, and a good genetic resource for establishing C4 pathways in C3 crops.

  15. C4 photosynthesis boosts growth by altering physiology, allocation and size.

    Science.gov (United States)

    Atkinson, Rebecca R L; Mockford, Emily J; Bennett, Christopher; Christin, Pascal-Antoine; Spriggs, Elizabeth L; Freckleton, Robert P; Thompson, Ken; Rees, Mark; Osborne, Colin P

    2016-01-01

    C4 photosynthesis is a complex set of leaf anatomical and biochemical adaptations that have evolved more than 60 times to boost carbon uptake compared with the ancestral C3 photosynthetic type(1-3). Although C4 photosynthesis has the potential to drive faster growth rates(4,5), experiments directly comparing C3 and C4 plants have not shown consistent effects(1,6,7). This is problematic because differential growth is a crucial element of ecological theory(8,9) explaining C4 savannah responses to global change(10,11), and research to increase C3 crop productivity by introducing C4 photosynthesis(12). Here, we resolve this long-standing issue by comparing growth across 382 grass species, accounting for ecological diversity and evolutionary history. C4 photosynthesis causes a 19-88% daily growth enhancement. Unexpectedly, during the critical seedling establishment stage, this enhancement is driven largely by a high ratio of leaf area to mass, rather than fast growth per unit leaf area. C4 leaves have less dense tissues, allowing more leaves to be produced for the same carbon cost. Consequently, C4 plants invest more in roots than C3 species. Our data demonstrate a general suite of functional trait divergences between C3 and C4 species, which simultaneously drive faster growth and greater investment in water and nutrient acquisition, with important ecological and agronomic implications. PMID:27243645

  16. Insights into the regulation of C4 leaf development from comparative transcriptomic analysis.

    Science.gov (United States)

    Huang, Chi-Fa; Chang, Yao-Ming; Lin, Jinn-Jy; Yu, Chun-Ping; Lin, Hsin-Hung; Liu, Wen-Yu; Yeh, Suying; Tu, Shih-Long; Wu, Shu-Hsing; Ku, Maurice Sb; Li, Wen-Hsiung

    2016-04-01

    C4 photosynthesis is more efficient than C3 photosynthesis for two reasons. First, C4 plants have evolved a repertoire of C4 enzymes to enhance CO2 fixation. Second, C4 leaves have Kranz anatomy with a high vein density in which the veins are surrounded by one layer of bundle sheath (BS) cells and one layer of mesophyll (M) cells. The BS and M cells are not only functionally well differentiated, but also well-coordinated for rapid transport of photo-assimilates between the two types of photosynthetic cells. Recent comparative transcriptomic and anatomical analyses of C3 and C4 leaves have revealed early onset of C4-related processes in leaf development, suggesting that delayed mesophyll differentiation contributes to higher C4 vein density, and have identified some candidate regulators for the higher vein density in C4 leaves. Moreover, comparative transcriptomics of maize husk (C3) and foliar leaves (C4) has identified a cohort of candidate regulators of Kranz anatomy development. In addition, there has been major progress in the identification of transcription factor binding sites, greatly increasing our knowledge of gene regulation in plants. PMID:26828378

  17. Transcriptome comparisons shed light on the pre-condition and potential barrier for C4 photosynthesis evolution in eudicots.

    Science.gov (United States)

    Tao, Yimin; Lyu, Ming-Ju Amy; Zhu, Xin-Guang

    2016-05-01

    C4 photosynthesis evolved independently from C3 photosynthesis in more than 60 lineages. Most of the C4 lineages are clustered together in the order Poales and the order Caryophyllales while many other angiosperm orders do not have C4 species, suggesting the existence of biological pre-conditions in the ancestral C3 species that facilitate the evolution of C4 photosynthesis in these lineages. To explore pre-adaptations for C4 photosynthesis evolution, we classified C4 lineages into the C4-poor and the C4-rich groups based on the percentage of C4 species in different genera and conducted a comprehensive comparison on the transcriptomic changes between the non-C4 species from the C4-poor and the C4-rich groups. Results show that species in the C4-rich group showed higher expression of genes related to oxidoreductase activity, light reaction components, terpene synthesis, secondary cell synthesis, C4 cycle related genes and genes related to nucleotide metabolism and senescence. In contrast, C4-poor group showed up-regulation of a PEP/Pi translocator, genes related to signaling pathway, stress response, defense response and plant hormone metabolism (ethylene and brassinosteroid). The implications of these transcriptomic differences between the C4-rich and C4-poor groups to C4 evolution are discussed.

  18. One decade after the discovery of single-cell C4 species in terrestrial plants: what did we learn about the minimal requirements of C4 photosynthesis?

    Science.gov (United States)

    Sharpe, Richard M; Offermann, Sascha

    2014-02-01

    Until about 10 years ago the general accepted textbook knowledge was that terrestrial C4 photosynthesis requires separation of photosynthetic functions into two specialized cell types, the mesophyll and bundle sheath cells forming the distinctive Kranz anatomy typical for C4 plants. This paradigm has been broken with the discovery of Suaeda aralocaspica, a chenopod from central Asia, performing C4 photosynthesis within individual chlorenchyma cells. Since then, three more single-cell C4 (SCC4) species have been discovered in the genus Bienertia. They are interesting not only because of their unusual mode of photosynthesis but also present a puzzle for cell biologists. In these species, two morphological and biochemical specialized types of chloroplasts develop within individual chlorenchyma cells, a situation that has never been observed in plants before. Here we review recent literature concerning the biochemistry, physiology, and molecular biology of SCC4 photosynthesis. Particularly, we focus on what has been learned in relation to the following questions: How does the specialized morphology required for the operation of SCC4 develop and is there a C3 intermediate type of photosynthesis during development? What is the degree of specialization between the two chloroplast types and how does this compare to the chloroplasts of Kranz C4 species? How do nucleus-encoded proteins that are targeted to chloroplasts accumulate differentially in the two chloroplast types and how efficient is the CO2 concentrating mechanism in SCC4 species compared to the Kranz C4 forms?

  19. Can miscanthus C4 photosynthesis compete with festulolium C3 photosynthesis in a temperate climate?

    DEFF Research Database (Denmark)

    Jiao, Xiurong; Sørensen, Kirsten Kørup; Andersen, Mathias Neumann;

    2016-01-01

    Miscanthus, a perennial grass with C4 photosynthesis, is regarded as a promising energy crop due to its high biomass productivity. Compared with other C4 species, most miscanthus genotypes have high cold tolerances at 14 °C. However, in temperate climates, temperatures below 14 °C are common...... at each temperature level and still maintained photosynthesis after growing for a longer period at 6/4 °C. Only two of five measured miscanthus genotypes increased photosynthesis immediately after the temperature was raised again. The photosynthetic capacity of festulolium was significantly higher at 10...

  20. Human pentraxin 3 binds to the complement regulator c4b-binding protein.

    Directory of Open Access Journals (Sweden)

    Anne Braunschweig

    Full Text Available The long pentraxin 3 (PTX3 is a soluble recognition molecule with multiple functions including innate immune defense against certain microbes and the clearance of apoptotic cells. PTX3 interacts with recognition molecules of the classical and lectin complement pathways and thus initiates complement activation. In addition, binding of PTX3 to the alternative complement pathway regulator factor H was shown. Here, we show that PTX3 binds to the classical and lectin pathway regulator C4b-binding protein (C4BP. A PTX3-binding site was identified within short consensus repeats 1-3 of the C4BP α-chain. PTX3 did not interfere with the cofactor activity of C4BP in the fluid phase and C4BP maintained its complement regulatory activity when bound to PTX3 on surfaces. While C4BP and factor H did not compete for PTX3 binding, the interaction of C4BP with PTX3 was inhibited by C1q and by L-ficolin. PTX3 bound to human fibroblast- and endothelial cell-derived extracellular matrices and recruited functionally active C4BP to these surfaces. Whereas PTX3 enhanced the activation of the classical/lectin pathway and caused enhanced C3 deposition on extracellular matrix, deposition of terminal pathway components and the generation of the inflammatory mediator C5a were not increased. Furthermore, PTX3 enhanced the binding of C4BP to late apoptotic cells, which resulted in an increased rate of inactivation of cell surface bound C4b and a reduction in the deposition of C5b-9. Thus, in addition to complement activators, PTX3 interacts with complement inhibitors including C4BP. This balanced interaction on extracellular matrix and on apoptotic cells may prevent excessive local complement activation that would otherwise lead to inflammation and host tissue damage.

  1. Evolution of GOLDEN2-LIKE gene function in C3 and C4 plants

    OpenAIRE

    Wang, Peng; Fouracre, Jim; Kelly, Steven; Karki, Shanta; Gowik, Udo; Aubry, Sylvain; Shaw, Michael K.; Westhoff, Peter; Slamet-Loedin, Inez H.; Quick, W. Paul; Hibberd, Julian M.; Langdale, Jane A.

    2012-01-01

    A pair of GOLDEN2-LIKE transcription factors is required for normal chloroplast development in land plant species that encompass the range from bryophytes to angiosperms. In the C4 plant maize, compartmentalized function of the two GLK genes in bundle sheath and mesophyll cells regulates dimorphic chloroplast differentiation, whereas in the C3 plants Physcomitrella patens and Arabidopsis thaliana the genes act redundantly in all photosynthetic cells. To assess whether the cell-specific functi...

  2. Temperature response of photosynthesis in C3, C4, and CAM plants: temperature acclimation and temperature adaptation.

    Science.gov (United States)

    Yamori, Wataru; Hikosaka, Kouki; Way, Danielle A

    2014-02-01

    Most plants show considerable capacity to adjust their photosynthetic characteristics to their growth temperatures (temperature acclimation). The most typical case is a shift in the optimum temperature for photosynthesis, which can maximize the photosynthetic rate at the growth temperature. These plastic adjustments can allow plants to photosynthesize more efficiently at their new growth temperatures. In this review article, we summarize the basic differences in photosynthetic reactions in C3, C4, and CAM plants. We review the current understanding of the temperature responses of C3, C4, and CAM photosynthesis, and then discuss the underlying physiological and biochemical mechanisms for temperature acclimation of photosynthesis in each photosynthetic type. Finally, we use the published data to evaluate the extent of photosynthetic temperature acclimation in higher plants, and analyze which plant groups (i.e., photosynthetic types and functional types) have a greater inherent ability for photosynthetic acclimation to temperature than others, since there have been reported interspecific variations in this ability. We found that the inherent ability for temperature acclimation of photosynthesis was different: (1) among C3, C4, and CAM species; and (2) among functional types within C3 plants. C3 plants generally had a greater ability for temperature acclimation of photosynthesis across a broad temperature range, CAM plants acclimated day and night photosynthetic process differentially to temperature, and C4 plants was adapted to warm environments. Moreover, within C3 species, evergreen woody plants and perennial herbaceous plants showed greater temperature homeostasis of photosynthesis (i.e., the photosynthetic rate at high-growth temperature divided by that at low-growth temperature was close to 1.0) than deciduous woody plants and annual herbaceous plants, indicating that photosynthetic acclimation would be particularly important in perennial, long-lived species that

  3. Regulation of Carotenoid Biosynthesis in Photosynthetic Organs.

    Science.gov (United States)

    Llorente, Briardo

    2016-01-01

    A substantial proportion of the dazzling diversity of colors displayed by living organisms throughout the tree of life is determined by the presence of carotenoids, which most often provide distinctive yellow, orange and red hues. These metabolites play fundamental roles in nature that extend far beyond their importance as pigments. In photosynthetic lineages, carotenoids are essential to sustain life, since they have been exploited to maximize light harvesting and protect the photosynthetic machinery from photooxidative stress. Consequently, photosynthetic organisms have evolved several mechanisms that adjust the carotenoid metabolism to efficiently cope with constantly fluctuating light environments. This chapter will focus on the current knowledge concerning the regulation of the carotenoid biosynthetic pathway in leaves, which are the primary photosynthetic organs of most land plants. PMID:27485221

  4. The Differences between NAD-ME and NADP-ME Subtypes of C4 Photosynthesis: More than Decarboxylating Enzymes

    Science.gov (United States)

    Rao, Xiaolan; Dixon, Richard A.

    2016-01-01

    As an adaptation to changing climatic conditions that caused high rates of photorespiration, C4 plants have evolved to display higher photosynthetic efficiency than C3 plants under elevated temperature, high light intensities, and drought. The C4 plants independently evolved more than 60 times in 19 families of angiosperms to establish similar but not uniform C4 mechanisms to concentrate CO2 around the carboxylating enzyme Rubisco (ribulose bisphosphate carboxylase oxygenase). C4 photosynthesis is divided into at least two basic biochemical subtypes based on the primary decarboxylating enzymes, NAD-dependent malic enzyme (NAD-ME) and NADP-dependent malic enzyme (NADP-ME). The multiple polygenetic origins of these subtypes raise questions about the association of C4 variation between biochemical subtypes and diverse lineages. This review addresses the differences in evolutionary scenario, leaf anatomy, and especially C4 metabolic flow, C4 transporters, and cell-specific function deduced from recently reported cell-specific transcriptomic, proteomic, and metabolic analyses of NAD-ME and NADP-ME subtypes. Current omic analysis has revealed the extent to which component abundances differ between the two biochemical subtypes, leading to a better understanding of C4 photosynthetic mechanisms in NAD-ME and NADP-ME subtypes.

  5. C# 4.0 in a Nutshell

    CERN Document Server

    Albahari, Joseph

    2010-01-01

    What people are saying about C# 4.0 in a Nutshell "C# 4.0 in a Nutshell is one of the few books I keep on my desk as a quick reference. It is a book I recommend."--Scott Guthrie, Corporate Vice President, .NET Developer Platform, Microsoft Corporation "A must-read for a concise but thorough examination of the parallel programming features in the .NET Framework 4."--Stephen Toub, Parallel Computing Platform Program Manager, Microsoft "This wonderful book is a great reference for developers of all levels."-- Chris Burrows, C# Compiler Team, Microsoft When you have questions about how to u

  6. Expression of the peptide C4b‐binding protein β in the arthritic joint

    Science.gov (United States)

    Sánchez‐Pernaute, O; Esparza‐Gordillo, J; Largo, R; Calvo, E; Alvarez‐Soria, M A; Marcos, M E; Herrero‐Beaumont, G; de Córdoba, S R

    2006-01-01

    Background C4b‐binding protein (C4BP) is a plasma oligomeric glycoprotein that participates in the regulation of complement and haemostasis. Complement‐regulatory activity depends on the C4BPα‐polypeptide, whereas the C4BPβ‐polypeptide inactivates protein S, interfering with the anti‐coagulatory protein C‐dependent pathway. Objective To investigate the expression of C4BPβ in the rheumatoid joint. Methods Expression of C4BP was studied in synovial explants from patients with rheumatoid arthritis, osteoarthritis and healthy controls, using immunohistochemistry and in situ hybridisation. C4BP isoforms and free C4BPβ were studied in synovial effusions from patients with rheumatoid arthritis, osteoarthritis and microcrystalline arthritis (MCA) by immunoblotting; total and free protein S levels were studied by enzyme immunoassay. Results C4BPβ was overexpressed in the synovial membranes of patients with rheumatoid arthritis, in close association with the severity of synovitis and the extension of interstitial fibrin deposits. As many as 85% fluids from patients with rheumatoid arthritis contained free C4BPβ, whereas this unusual polypeptide was present in 50% fluids from patients with MCA and 40% fluids from patients with osteoarthritis. Free protein S at the effusions was pathologically reduced in patients with rheumatoid arthrits and MCA, and remained normal in patients with osteoarthritis. Conclusion C4BPβ is expressed by the inflamed synovial tissue, where it can participate in processes of tissue remodelling associated with invasive growth. PMID:16679431

  7. Oxygen isotope composition of evapotranspiration and its relation to C4 photosynthetic discrimination

    Science.gov (United States)

    The oxygen isotope ratio of water (18 O-H2O) and carbon dioxide (18 O-CO2) is an important signal of global change and can provide constraints on the coupled carbon-water cycle. Here, simultaneous observations of 18O-H2O (liquid and vapor phases) and 18 O-CO2 were used to investigate the relation be...

  8. Correlation of the activation of the fourth component of complement (C4) with disease activity in systemic lupus erythematosus.

    OpenAIRE

    Senaldi, G; Makinde, V A; Vergani, D; Isenberg, D. A.

    1988-01-01

    Levels of C4d, a fragment of C4 generated during activation of the classical complement pathway, were measured in the plasma of 48 patients with systemic lupus erythematosus, 11 with inactive (group 1), 23 with mildly active (group 2), 14 with moderately/severely active disease (group 3), and 30 healthy subjects. Levels of C3d, C4, and C3 were also measured and the C4d/C4 and C3d/C3 ratios calculated. C4d levels correlated with the degree of disease activity, being higher in group 3 than in g...

  9. Leaf cold acclimation and freezing injury in C3 and C4 grasses of the Mongolian Plateau.

    Science.gov (United States)

    Liu, Mei-Zhen; Osborne, Colin P

    2008-01-01

    The scarcity of C4 plants in cool climates is usually attributed to their lower photosynthetic efficiency than C3 species at low temperatures. However, a lower freezing resistance may also decrease the competitive advantage of C4 plants by reducing canopy duration, especially in continental steppe grasslands, where a short, hot growing season is bracketed by frost events. This paper reports an experimental test of the hypothesis that cold acclimation is negligible in C4 grasses, leading to greater frost damage than in C3 species. The experiments exposed six C3 and three C4 Mongolian steppe grasses to 20 d chilling or control pre-treatments, followed by a high-light freezing event. Leaf resistance to freezing injury was independent of photosynthetic type. Three C3 species showed constitutive freezing resistance characterized by 95% leaf mortality after the freezing event. However, three C3 and two C4 species displayed a cold acclimation response, showing significant decreases in osmotic potential and photosynthesis after exposure to chilling, and a 30-72% reduction of leaf freezing injury. This result suggested that down-regulation of osmotic potential may be involved in the cold acclimation process, and demonstrated that there is no inherent barrier to the development of cold acclimation in C4 species from this ecosystem. Cold acclimation via osmoregulation represents a previously undescribed mechanism to explain the persistence of C4 plants in cool climates. PMID:18980952

  10. Interactive response of photosynthetic characteristics in Haloxylon ammodendron and Hedysarum scoparium exposed to soil water and air vapor pressure deficits.

    Science.gov (United States)

    Gong, Chunmei; Wang, Jiajia; Hu, Congxia; Wang, Junhui; Ning, Pengbo; Bai, Juan

    2015-08-01

    C4 plants possess better drought tolerance than C3 plants. However, Hedysarum scoparium, a C3 species, is dominant and widely distributed in the desert areas of northwestern China due to its strong drought tolerance. This study compared it with Haloxylon ammodendron, a C4 species, regarding the interactive effects of drought stress and different leaf-air vapor pressure deficits. Variables of interest included gas exchange, the activity levels of key C4 photosynthetic enzymes, and cellular anatomy. In both species, gas exchange parameters were more sensitive to high vapor pressure deficit than to strong water stress, and the net CO2 assimilation rate (An) was enhanced as vapor pressure deficits increased. A close relationship between An and stomatal conductance (gs) suggested that the species shared a similar response mechanism. In H. ammodendron, the activity levels of key C4 enzymes were higher, including those of phosphoenolpyruvate carboxylase (PEPC) and nicotinamide adenine dinucleotide phosphate-malate enzyme (NADP-ME), whereas in H. scoparium, the activity level of nicotinamide adenine dinucleotide-malate enzyme (NAD-ME) was higher. Meanwhile, H. scoparium utilized adaptive structural features, including a larger relative vessel area and a shorter distance from vein to stomata, which facilitated the movement of water. These findings implied that some C4 biochemical pathways were present in H. scoparium to respond to environmental challenges. PMID:26257361

  11. Interactions of C4 subtype metabolic activities and transport in maize are revealed through the characterization of DCT2 mutants

    Science.gov (United States)

    C4 photosynthesis is an elaborate set of metabolic pathways that utilize specialized anatomical and biochemical adaptations to concentrate CO2 around RuBisCO. The activities of the C4 pathways are coordinated between two specialized leaf cell types, mesophyll (M) and bundle sheath (BS), and rely hea...

  12. The C-4 Dark Matter Experiment

    Energy Technology Data Exchange (ETDEWEB)

    Bonicalzi, Ricco M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Collar, J. I. [Univ. of Chicago, IL (United States); Colaresi, J. [CANBERRA Industries, Meriden, CT (United States); Fast, James E. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Fields, N. [Univ. of Chicago, IL (United States); Fuller, Erin S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Hai, M. [Univ. of Chicago, IL (United States); Hossbach, Todd W. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Kos, Marek S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Orrell, John L. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Overman, Cory T. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Reid, Douglas J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); VanDevender, Brent A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Wiseman, Clinton G. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Yocum, K. M. [CANBERRA Industries, Meriden, CT (United States)

    2013-02-18

    Abstract We describe the experimental design of C-4, an expansion of the CoGeNT dark matter search to four identical detectors each approximately three times the mass of the p-type point contact (PPC) germanium diode presently taking data at the Soudan Underground Laboratory. Expected reductions of radioactive backgrounds and energy threshold are discussed, including an estimate of the additional sensitivity to low-mass dark matter candidates to be obtained with this search.

  13. Cometary Coma Chemical Composition (C4) Mission

    Science.gov (United States)

    Carle, Glenn C.; Clark, Benton C.; Knocke, Philip C.; OHara, Bonnie J.; Adams, Larry; Niemann, Hasso B.; Alexander, Merle; Veverka, Joseph; Goldstein, Raymond; Huebner, Walter; Morrison, David (Technical Monitor)

    1994-01-01

    Cometary exploration remains of great importance to virtually all of space science. Because comets are presumed to be remnants of the early solar nebula, they are expected to provide fundamental knowledge as to the origin and development of the solar system as well as to be key to understanding of the source of volatiles and even life itself in the inner solar system. Clearly the time for a detailed study of the composition of these apparent messages from the past has come. A comet rendezvous mission, the Cometary Coma Chemical Composition (C4) Mission, is now being studied as a candidate for the new Discovery program. This mission is a highly-focussed and usefully-limited subset of the Cometary Rendezvous Asteroid Flyby (CRAF) Mission. The C4 mission will concentrate on measurements that will produce an understanding of the composition and physical makeup of a cometary nucleus. The core science goals of the C4 mission are 1) to determine the chemical, elemental, and isotopic composition of a cometary nucleus and 2) to characterize the chemical and isotopic nature of its atmosphere. A related goal is to obtain temporal information about the development of the cometary coma as a function of time and orbital position. The four short-period comets -- Tempel 1, Tempel 2, Churyumov-Gerasimenko, and Wirtanen -which all appear to have acceptable dust production rates, were identified as candidate targets. Mission opportunities have been identified beginning as early as 1998. Tempel I with a launch in 1999, however, remains the baseline comet for studies of and planning the C4 mission. The C4 mission incorporates two science instruments and two engineering instruments in the payload to obtain the desired measurements. The science instruments include an advanced version of the Cometary Ice and Dust Experiment (CIDEX), a mini-CIDEX with a sample collection system, an X-ray Fluorescence Spectrometer and a Pyrolysis-Gas Chromatograph, and a simplified version of the Neutral

  14. C4 bioenergy crops for cool climates, with special emphasis on perennial C4 grasses.

    Science.gov (United States)

    Sage, Rowan F; de Melo Peixoto, Murilo; Friesen, Patrick; Deen, Bill

    2015-07-01

    There is much interest in cultivating C4 perennial plants in northern climates where there is an abundance of land and a potential large market for biofuels. C4 feedstocks can exhibit superior yields to C3 alternatives during the long warm days of summer at high latitude, but their summer success depends on an ability to tolerate deep winter cold, spring frosts, and early growth-season chill. Here, we review cold tolerance limits in C4 perennial grasses. Dozens of C4 species are known from high latitudes to 63 °N and elevations up to 5200 m, demonstrating that C4 plants can adapt to cold climates. Of the three leading C4 grasses being considered for bioenergy production in cold climates--Miscanthus spp., switchgrass (Panicum virgatum), and prairie cordgrass (Spartina pectinata)--all are tolerant of cool temperatures (10-15 °C), but only cordgrass tolerates hard spring frosts. All three species overwinter as dormant rhizomes. In the productive Miscanthus×giganteus hybrids, exposure to temperatures below -3 °C to -7 °C will kill overwintering rhizomes, while for upland switchgrass and cordgrass, rhizomes survive exposure to temperatures above -20 °C to -24 °C. Cordgrass emerges earlier than switchgrass and M. giganteus genotypes, but lacks the Miscanthus growth potential once warmer days of late spring arrive. To enable C4-based bioenergy production in colder climates, breeding priorities should emphasize improved cold tolerance of M.×giganteus, and enhanced productivity of switchgrass and cordgrass. This should be feasible in the near future, because wild populations of each species exhibit a diverse range of cold tolerance and growth capabilities.

  15. Identification of C4 photosynthesis metabolism and regulatory-associated genes in Eleocharis vivipara by SSH.

    Science.gov (United States)

    Chen, Taiyu; Ye, Rongjian; Fan, Xiaolei; Li, Xianghua; Lin, Yongjun

    2011-09-01

    This is the first effort to investigate the candidate genes involved in kranz developmental regulation and C(4) metabolic fluxes in Eleocharis vivipara, which is a leafless freshwater amphibious plant and possesses a distinct culms anatomy structure and photosynthetic pattern in contrasting environments. A terrestrial specific SSH library was constructed to investigate the genes involved in kranz anatomy developmental regulation and C(4) metabolic fluxes. A total of 73 ESTs and 56 unigenes in 384 clones were identified by array hybridization and sequencing. In total, 50 unigenes had homologous genes in the databases of rice and Arabidopsis. The real-time quantitative PCR results showed that most of the genes were accumulated in terrestrial culms and ABA-induced culms. The C(4) marker genes were stably accumulated during the culms development process in terrestrial culms. With respect to C(3) culms, C(4) photosynthesis metabolism consumed much more transporters and translocators related to ion metabolism, organic acids and carbohydrate metabolism, phosphate metabolism, amino acids metabolism, and lipids metabolism. Additionally, ten regulatory genes including five transcription factors, four receptor-like proteins, and one BURP protein were identified. These regulatory genes, which co-accumulated with the culms developmental stages, may play important roles in culms structure developmental regulation, bundle sheath chloroplast maturation, and environmental response. These results shed new light on the C(4) metabolic fluxes, environmental response, and anatomy structure developmental regulation in E. vivipara. PMID:21739352

  16. Molecular cloning of C4-specific Ppc gene of sorghum and its high level expression in transgenic rice

    Institute of Scientific and Technical Information of China (English)

    ZHANG Fang; CHI Wei; WANG Qiang; ZHANG Qide; WU Naihu

    2003-01-01

    In order to improve the carbon-assimilation ability of C3 plants, we isolated a C4-specific photosynthetic enzyme gene, Ppc (encode phosphoenolpyruvate carboxylase, PEPCase) from the genome of the C4 plant, sorghum, and transformed rice with it. As shown by sequence analysis, the gene is composed of 10 exons and 9 introns, and the full-length transcript is 5989 bp long. A recombinant expression vector, p1301PEPC, was constructed by inserting the gene into a plasmid vector, pCAMBIA1301, which was then transformed into two japonica rice varieties, Nongken 58 and Zhonghua 10, using an Agrobacterium-mediated transformation system. PCR analysis, activity measurement of PEPCase, and protein-, RNA- and DNA-based hybridization all confirmed the successful integration of the C4-specific Ppc gene into the nuclear genome of rice and its high level expression. Physiological studies revealed the photosynthetic features characterizing C4 plants such as marked lowering of CO2 compensation point and photorespiration rate, and improved carboxylation efficiency. This study provides useful experimental materialsand opens up new avenues for further studies on improving photosynthetic efficiency of elite varieties of rice.

  17. Renal AA amyloidosis in a patient with hereditary complete complement C4 deficiency

    Directory of Open Access Journals (Sweden)

    Imed Helal

    2011-01-01

    Full Text Available Hereditary complete C4 deficiency has until now been reported in 30 cases only. A disturbed clearance of immune- complexes probably predisposes these individuals to systemic lupus erythematosus, other immune- complex diseases and recurrent microbial infections. We present here a 20- year- old female with hereditary complete C4 deficiency. Renal biopsy demonstrated renal AA amyloidosis. This unique case further substantiates that deficiency of classical pathway components predisposes to the development of recurrent microbial infections and that the patients may develop AA amyloidosis. Furthermore, in clinical practice, the nephrotic syndrome occurring in a patient with hereditary complete complement C4 deficiency should lead to the suspicion of renal AA amyloidosis.

  18. From proto-Kranz to C4 Kranz: building the bridge to C4 photosynthesis.

    Science.gov (United States)

    Sage, Rowan F; Khoshravesh, Roxana; Sage, Tammy L

    2014-07-01

    In this review, we examine how the specialized "Kranz" anatomy of C4 photosynthesis evolved from C3 ancestors. Kranz anatomy refers to the wreath-like structural traits that compartmentalize the biochemistry of C4 photosynthesis and enables the concentration of CO2 around Rubisco. A simplified version of Kranz anatomy is also present in the species that utilize C2 photosynthesis, where a photorespiratory glycine shuttle concentrates CO2 into an inner bundle-sheath-like compartment surrounding the vascular tissue. C2 Kranz is considered to be an intermediate stage in the evolutionary development of C4 Kranz, based on the intermediate branching position of C2 species in 14 evolutionary lineages of C4 photosynthesis. In the best-supported model of C4 evolution, Kranz anatomy in C2 species evolved from C3 ancestors with enlarged bundle sheath cells and high vein density. Four independent lineages have been identified where C3 sister species of C2 plants exhibit an increase in organelle numbers in the bundle sheath and enlarged bundle sheath cells. Notably, in all of these species, there is a pronounced shift of mitochondria to the inner bundle sheath wall, forming an incipient version of the C2 type of Kranz anatomy. This incipient version of C2 Kranz anatomy is termed proto-Kranz, and is proposed to scavenge photorespiratory CO2. By doing so, it may provide fitness benefits in hot environments, and thus represent a critical first stage of the evolution of both the C2 and C4 forms of Kranz anatomy.

  19. Low C4 gene copy numbers are associated with superior graft survival in patients transplanted with a deceased donor kidney

    DEFF Research Database (Denmark)

    Bay, Jakob T; Schejbel, Lone; Madsen, Hans O;

    2013-01-01

    rejection, but a relationship between graft survival and serum C4 concentration as well as C4 genetic variation has not been established. We evaluated this using a prospective study design of 676 kidney transplant patients and 211 healthy individuals as controls. Increasing C4 gene copy numbers......Complement C4 is a central component of the classical and the lectin pathways of the complement system. The C4 protein exists as two isotypes C4A and C4B encoded by the C4A and C4B genes, both of which are found with varying copy numbers. Deposition of C4 has been implicated in kidney graft...... significantly correlated with the C4 serum concentration in both patients and controls. Patients with less than four total copies of C4 genes transplanted with a deceased donor kidney experienced a superior 5-year graft survival (hazard ratio 0.46, 95% confidence interval: 0.25-0.84). No significant association...

  20. Mesophyll Chloroplast Investment in C3, C4 and C2 Species of the Genus Flaveria.

    Science.gov (United States)

    Stata, Matt; Sage, Tammy L; Hoffmann, Natalie; Covshoff, Sarah; Ka-Shu Wong, Gane; Sage, Rowan F

    2016-05-01

    The mesophyll (M) cells of C4 plants contain fewer chloroplasts than observed in related C3 plants; however, it is uncertain where along the evolutionary transition from C3 to C4 that the reduction in M chloroplast number occurs. Using 18 species in the genus Flaveria, which contains C3, C4 and a range of C3-C4 intermediate species, we examined changes in chloroplast number and size per M cell, and positioning of chloroplasts relative to the M cell periphery. Chloroplast number and coverage of the M cell periphery declined in proportion to increasing strength of C4 metabolism in Flaveria, while chloroplast size increased with increasing C4 cycle strength. These changes increase cytosolic exposure to the cell periphery which could enhance diffusion of inorganic carbon to phosphenolpyruvate carboxylase (PEPC), a cytosolic enzyme. Analysis of the transcriptome from juvenile leaves of nine Flaveria species showed that the transcript abundance of four genes involved in plastid biogenesis-FtsZ1, FtsZ2, DRP5B and PARC6-was negatively correlated with variation in C4 cycle strength and positively correlated with M chloroplast number per planar cell area. Chloroplast size was negatively correlated with abundance of FtsZ1, FtsZ2 and PARC6 transcripts. These results indicate that natural selection targeted the proteins of the contractile ring assembly to effect the reduction in chloroplast numbers in the M cells of C4 Flaveria species. If so, efforts to engineer the C4 pathway into C3 plants might evaluate whether inducing transcriptome changes similar to those observed in Flaveria could reduce M chloroplast numbers, and thus introduce a trait that appears essential for efficient C4 function.

  1. Olefins production from C4 stream; Producao de olefinas a partir de corrente C4

    Energy Technology Data Exchange (ETDEWEB)

    Basso, Julia A.; Feltran, Marina B.; Becker, Patricia Luiza; Rocha, Priscila L. [PETROBRAS, Rio de Janeiro, RJ (Brazil)

    2008-07-01

    The petrochemical sector in Brazil has been growing in terms of investment and expansion of production capacity, due to increased demand for thermoplastic products. However, the offer of basic petrochemical raw materials obtained by conventional routes is not following this increasing demand which stimulates the search for new competitive technologies. Moreover, there is the opportunity to use low value added C4 streams from FCC process that are available in the Brazilian refineries, for the production of petrochemicals. Several possibilities of C4 stream use to produce butadienes, MTBE, maleic anhydride, ethylene and propylene have been discussed in this work. The production of propylene seems to be the most economically attractive option in Brazil, since its offer will not keep up with the growth in its demand, according to ABIQUIM forecasts. Therefore some propylene production technologies from C4 streams - steam cracking, metathesis and selective cracking - have been evaluated considering their basic characteristics and applications. The goal of this study is to provide preliminary information to support future project evaluations of petrochemical/refinery integration, through comparative analysis of these technologies. (author)

  2. Cinnamic acid 4-hydroxylase of sorghum [Sorghum biocolor (L.) Moench] gene SbC4H1 restricts lignin synthesis in Arabidopsis

    Science.gov (United States)

    Cinnamic acid 4-hydroxylase (C4H) is the first hydroxylase enzyme of the phenylpropanoid pathway, and its content and activity affects the lignin synthesis. In this study, we isolated a C4H gene SbC4H1 from the suppression subtractive hybridization library of brown midrib (bmr) mutants of Sorghum b...

  3. Photosynthetic Diurnal Variation of Soybean Cultivars with High Photosynthetic Efficiency

    Institute of Scientific and Technical Information of China (English)

    MAN Wei-qun; DU Wei-guang; ZHANG Gui-ru; LUAN Xiao-yan; GE Qiao-ying; HAO Nai-bin; CHEN Yi

    2002-01-01

    The photosynthetic characters were investigated among soybean cultivars with high photosynthetic efficiency and high yield. The results indicated that: 1) There were significant differences in photosynthetic rate (Ph) and dark respiration rate (DR) under saturation light intensity and appropriate temperature.2) There were a little difference in light compensation point among them. Photo flux density (PFD) were mong the cultivars. Diurnal variation of Pn was shown a curve with two peaks. 4) The cultivars with high photosynthetic efficiency were subjected less to photoinhibition than that with high yield. Critical temperatures of photoinhibition in high photosynthetic efficiency cultivars were higher than that of high yield.

  4. Combined C4d and CD3 immunostaining predicts immunoglobulin (Ig)A nephropathy progression

    NARCIS (Netherlands)

    Faria, B.; Henriques, C.; Matos, A. C.; Daha, M. R.; Pestana, M.; Seelen, M.

    2015-01-01

    A number of molecules have been shown recently to be involved in the pathogenesis and progression of immunoglobulin (Ig)A nephropathy (IgAN). Among these, we have selected C4d (complement lectin pathway involvement), CD3 (T cell marker, traducing interstitial inflammation), transglutaminase 2 (TGase

  5. Genes involved in the biosynthesis of photosynthetic pigments in the purple sulfur photosynthetic bacterium Thiocapsa roseopersicina.

    Science.gov (United States)

    Kovács, Akos T; Rákhely, Gábor; Kovács, Kornél L

    2003-06-01

    A pigment mutant strain of the purple sulfur photosynthetic bacterium Thiocapsa roseopersicina BBS was isolated by plasposon mutagenesis. Nineteen open reading frame, most of which are thought to be genes involved in the biosynthesis of carotenoids, bacteriochlorophyll, and the photosynthetic reaction center, were identified surrounding the plasposon in a 22-kb-long chromosomal locus. The general arrangement of the photosynthetic genes was similar to that in other purple photosynthetic bacteria; however, the locations of a few genes occurring in this region were unusual. Most of the gene products showed the highest similarity to the corresponding proteins in Rubrivivax gelatinosus. The plasposon was inserted into the crtD gene, likely inactivating crtC as well, and the carotenoid composition of the mutant strain corresponded to the aborted spirilloxanthin pathway. Homologous and heterologous complementation experiments indicated a conserved function of CrtC and CrtD in the purple photosynthetic bacteria. The crtDC and crtE genes were shown to be regulated by oxygen, and a role of CrtJ in aerobic repression was suggested.

  6. Endoreduplication is not involved in bundle-sheath formation in the C4 species Cleome gynandra.

    Science.gov (United States)

    Aubry, Sylvain; Kneřová, Jana; Hibberd, Julian M

    2014-07-01

    There is currently significant interest in engineering the two-celled C4 photosynthesis pathway into crops such as rice in order to increase yield. This will require alterations to the biochemistry of photosynthesis in both mesophyll (M) and bundle-sheath (BS) cells, but also alterations to leaf anatomy. For example, the BS of C4 species is enlarged compared with that in C3 species. Because cell and nucleus size are often correlated, this study investigated whether nuclear endoreduplication is associated with increased differentiation and expansion of BS cells. Nuclei in the BS of C4 Cleome gynandra were tagged with green fluorescent protein. Confocal laser-scanning microscopy and flow cytometry of isolated nuclei were used to quantify size and DNA content in BS cells. The results showed a significant endoreduplication in BS cells of C. gynandra but not in additional C4 lineages from both the monocotyledonous and dicotyledenous plants. Furthermore, in the C3 species Arabidopsis thaliana, BS cells undergo endoreduplication. Due to this significant endoreduplication in the small BS cells of C3 A. thaliana, it was concluded that endoreduplication of BS nuclei in C4 plants is not linked to expansion and differentiation of BS cells, and therefore that alternative strategies to increase this compartment need to be sought in order to engineer C4 traits into C3 crops such as rice. PMID:24220652

  7. Vibrational Properties of Body-Centered Tetragonal C4

    Institute of Scientific and Technical Information of China (English)

    L(U) Zhen-Long; YOU Jing-Han; ZHAO Yuan-Yuan; WANG Hui

    2011-01-01

    Body-centered tetragonal C4 (bct C4) is a new form of crystalline sp3 carbon, which is found to be transparent, dynamically stable at zero pressure and more stable than graphite beyond 18.6 GPa.Symmetry analysis of the vibrational modes of bct C4 at Brillouin zone center is performed, Raman and infrared active modes are identified.The analysis results show that, different from cubic diamond and hexagonal diamond, there is an infrared active mode in bct C4.Based on first-principle method within the local density approximation, vibrational frequencies, Born effective charge tensors, and infrared absorption intensity of bct C4 are obtained.The vibrational modes of bct C4 are presented and compared with those of cubic diamond and hexagonal diamond in detail.

  8. On graphs without a C4 or a diamond

    CERN Document Server

    Eschen, Elaine M; Spinrad, Jeremy P; Sritharan, R

    2009-01-01

    We consider the class of (C4, diamond)-free graphs; graphs in this class do not contain a C4 or a diamond as an induced subgraph. We provide an efficient recognition algorithm for this class. We count the number of maximal cliques in a (C4, diamond)-free graph and the number of n-vertex, labeled (C4, diamond)-free graphs. We also give an efficient algorithm for finding a largest clique in the more general class of (house, diamond)-free graphs.

  9. Pros and cons for C4d as a biomarker

    OpenAIRE

    Cohen, Danielle; Colvin, Robert B.; Mohamed R. Daha; Drachenberg, Cinthia B; Haas, Mark; Nickeleit, Volker; Salmon, Jane E.; Sis, Banu; ZHAO, Ming-Hui; Bruijn, Jan A.; Bajema, Ingeborg M.

    2012-01-01

    The introduction of C4d in daily clinical practice in the late nineties aroused an ever-increasing interest in the role of antibody-mediated mechanisms in allograft rejection. As a marker of classical complement activation, C4d made it possible to visualize the direct link between anti-donor antibodies and tissue injury at sites of antibody binding in a graft. With the expanding use of C4d worldwide several limitations of C4d were identified. For instance, in ABO-incompatible transplantations...

  10. Pros and cons for C4d as a biomarker.

    Science.gov (United States)

    Cohen, Danielle; Colvin, Robert B; Daha, Mohamed R; Drachenberg, Cinthia B; Haas, Mark; Nickeleit, Volker; Salmon, Jane E; Sis, Banu; Zhao, Ming-Hui; Bruijn, Jan A; Bajema, Ingeborg M

    2012-04-01

    The introduction of C4d in daily clinical practice in the late nineties aroused an ever-increasing interest in the role of antibody-mediated mechanisms in allograft rejection. As a marker of classical complement activation, C4d made it possible to visualize the direct link between anti-donor antibodies and tissue injury at sites of antibody binding in a graft. With the expanding use of C4d worldwide several limitations of C4d were identified. For instance, in ABO-incompatible transplantations C4d is present in the majority of grafts but this seems to point at 'graft accommodation' rather than antibody-mediated rejection. C4d is now increasingly recognized as a potential biomarker in other fields where antibodies can cause tissue damage, such as systemic autoimmune diseases and pregnancy. In all these fields, C4d holds promise to detect patients at risk for the consequences of antibody-mediated disease. Moreover, the emergence of new therapeutics that block complement activation makes C4d a marker with potential to identify patients who may possibly benefit from these drugs. This review provides an overview of the past, present, and future perspectives of C4d as a biomarker, focusing on its use in solid organ transplantation and discussing its possible new roles in autoimmunity and pregnancy. PMID:22297669

  11. Evaluation of Serum Complement C3 and C4 Levels as biomarkers for Systemic Lupus Erythromatosus

    Directory of Open Access Journals (Sweden)

    Fayez Muhammad Shaldoum*, Yousra Refaey Abdo Mohammed, Naglaa Mohamed El Wakeel and Abeer Saad Gawish

    2012-10-01

    .Conclusions: Patients showed different degrees of oral and systemic manifestations, which exacerbate and become acute with decreased level of complement C4 and instability of C3 level. Accordingly, the low level of C4 was associated with the development and exacerbation of SLE. Increased C3 levels is solely due to activity through the alternative pathway in SLE patients

  12. The functional significance of C3-C4 intermediate traits in Heliotropium L. (Boraginaceae): gas exchange perspectives.

    Science.gov (United States)

    Vogan, Patrick J; Frohlich, Michael W; Sage, Rowan F

    2007-10-01

    We demonstrate for the first time the presence of species exhibiting C3-C4 intermediacy in Heliotropium (sensu lato), a genus with over 100 C3 and 150 C4 species. CO2 compensation points (Gamma) and photosynthetic water-use efficiencies (WUEs) were intermediate between C3 and C4 values in three species of Heliotropium: Heliotropium convolvulaceum (Gamma = 20 micromol CO2 mol(-1) air), Heliotropium racemosum (Gamma = 22 micromol mol(-1)) and Heliotropium greggii (Gamma = 17 micromol mol(-1)). Heliotropium procumbens may also be a weak C3-C4 intermediate based on a slight reduction in Gamma (48.5 micromol CO2 mol(-1)) compared to C3Heliotropium species (52-60 micromol mol(-1)). The intermediate species H. convolvulaceum, H. greggii and H. racemosum exhibited over 50% enhancement of net CO2 assimilation rates at low CO2 levels (200-300 micromol mol(-1)); however, no significant differences in stomatal conductance were observed between the C3 and C3-C4 species. We also assessed the response of Gamma to variation in O2 concentration for these species. Heliotropium convolvulaceum, H. greggii and H. racemosum exhibited similar responses of Gamma to O2 with response slopes that were intermediate between the responses of C3 and C4 species below 210 mmol O2 mol(-1) air. The presence of multiple species displaying C3-C4 intermediate traits indicates that Heliotropium could be a valuable new model for studying the evolutionary transition from C3 to C4 photosynthesis. PMID:17727423

  13. Initial events during the evolution of C4 photosynthesis in C3 species of Flaveria.

    Science.gov (United States)

    Sage, Tammy L; Busch, Florian A; Johnson, Daniel C; Friesen, Patrick C; Stinson, Corey R; Stata, Matt; Sultmanis, Stefanie; Rahman, Beshar A; Rawsthorne, Stephen; Sage, Rowan F

    2013-11-01

    The evolution of C4 photosynthesis in many taxa involves the establishment of a two-celled photorespiratory CO2 pump, termed C2 photosynthesis. How C3 species evolved C2 metabolism is critical to understanding the initial phases of C4 plant evolution. To evaluate early events in C4 evolution, we compared leaf anatomy, ultrastructure, and gas-exchange responses of closely related C3 and C2 species of Flaveria, a model genus for C4 evolution. We hypothesized that Flaveria pringlei and Flaveria robusta, two C3 species that are most closely related to the C2 Flaveria species, would show rudimentary characteristics of C2 physiology. Compared with less-related C3 species, bundle sheath (BS) cells of F. pringlei and F. robusta had more mitochondria and chloroplasts, larger mitochondria, and proportionally more of these organelles located along the inner cell periphery. These patterns were similar, although generally less in magnitude, than those observed in the C2 species Flaveria angustifolia and Flaveria sonorensis. In F. pringlei and F. robusta, the CO2 compensation point of photosynthesis was slightly lower than in the less-related C3 species, indicating an increase in photosynthetic efficiency. This could occur because of enhanced refixation of photorespired CO2 by the centripetally positioned organelles in the BS cells. If the phylogenetic positions of F. pringlei and F. robusta reflect ancestral states, these results support a hypothesis that increased numbers of centripetally located organelles initiated a metabolic scavenging of photorespired CO2 within the BS. This could have facilitated the formation of a glycine shuttle between mesophyll and BS cells that characterizes C2 photosynthesis.

  14. Carbon and oxygen isotope working standards from C3 and C4 photosynthates.

    Science.gov (United States)

    Spangenberg, Jorge E

    2006-09-01

    A preparation of organic working standards for the online measurement of 13C/12C and 18O/16O ratios in biological material is presented. The organic working standards are simple and inexpensive C3 and C4 carbohydrates (sugars or cellulose) from distinct geographic origin, including white sugar, toilet and XEROX papers from Switzerland, maize from Ivory Coast, cane sugar from Brazil, papyrus from Egypt, and the core of the stem of a Cyperus papyrus plant from Kenya. These photosynthetic products were compared with International Atomic Energy standards CH-3 and CH-6 and other calibration materials. The presented working standards cover a 15% range of 13C/12C ratios and 9% for 18O/16O, with a precision10. PMID:16870558

  15. Graphs with forbidden $C_4$, $\\overline{C_4}$, chair and $\\overline{chair}$ and the second neighborhood conjecture

    OpenAIRE

    Ghazal, Salman

    2016-01-01

    Seymour's Second Neighborhood Conjecture asserts that every oriented graph has a vertex whose first out-neighborhood is at most as large as its second out-neighborhood. Combs are the graphs having no induced $C_4$, $\\overline{C_4}$, $C_5$, chair or $\\overline{chair}$. We characterize combs using dependency digraphs. We find the structure of the graphs having no induced $C_4$, $\\overline{C_4}$, chair or $\\overline{chair}$ and characterize them using dependency digraphs. We also find the struct...

  16. Carbon isotope discrimination as a diagnostic tool for C4 photosynthesis in C3-C4 intermediate species.

    Science.gov (United States)

    Alonso-Cantabrana, Hugo; von Caemmerer, Susanne

    2016-05-01

    The presence and activity of the C4 cycle in C3-C4 intermediate species have proven difficult to analyze, especially when such activity is low. This study proposes a strategy to detect C4 activity and estimate its contribution to overall photosynthesis in intermediate plants, by using tunable diode laser absorption spectroscopy (TDLAS) coupled to gas exchange systems to simultaneously measure the CO2 responses of CO2 assimilation (A) and carbon isotope discrimination (Δ) under low O2 partial pressure. Mathematical models of C3-C4 photosynthesis and Δ are then fitted concurrently to both responses using the same set of constants. This strategy was applied to the intermediate species Flaveria floridana and F. brownii, and to F. pringlei and F. bidentis as C3 and C4 controls, respectively. Our results support the presence of a functional C4 cycle in F. floridana, that can fix 12-21% of carbon. In F. brownii, 75-100% of carbon is fixed via the C4 cycle, and the contribution of mesophyll Rubisco to overall carbon assimilation increases with CO2 partial pressure in both intermediate plants. Combined gas exchange and Δ measurement and modeling is a powerful diagnostic tool for C4 photosynthesis. PMID:26862154

  17. Tangled evolutionary processes with commonality and diversity in plastidial glycolipid synthesis in photosynthetic organisms.

    Science.gov (United States)

    Hori, Koichi; Nobusawa, Takashi; Watanabe, Tei; Madoka, Yuka; Suzuki, Hideyuki; Shibata, Daisuke; Shimojima, Mie; Ohta, Hiroyuki

    2016-09-01

    In photosynthetic organisms, the photosynthetic membrane constitutes a scaffold for light-harvesting complexes and photosynthetic reaction centers. Three kinds of glycolipids, namely monogalactosyldiacylglycerol, digalactosyldiacylglycerol, and sulfoquinovosyldiacylglycerol, constitute approximately 80-90% of photosynthetic membrane lipids and are well conserved from tiny cyanobacteria to the leaves of huge trees. These glycolipids perform a wide variety of functions beyond biological membrane formation. In particular, the capability of adaptation to harsh environments through regulation of membrane glycolipid composition is essential for healthy growth and development of photosynthetic organisms. The genome analysis and functional genetics of the model seed plant Arabidopsis thaliana have yielded many new findings concerning the biosynthesis, regulation, and functions of glycolipids. Nevertheless, it remains to be clarified how the complex biosynthetic pathways and well-organized functions of glycolipids evolved in early and primitive photosynthetic organisms, such as cyanobacteria, to yield modern photosynthetic organisms like land plants. Recently, genome data for many photosynthetic organisms have been made available as the fruit of the rapid development of sequencing technology. We also have reported the draft genome sequence of the charophyte alga Klebsormidium flaccidum, which is an intermediate organism between green algae and land plants. Here, we performed a comprehensive phylogenic analysis of glycolipid biosynthesis genes in oxygenic photosynthetic organisms including K. flaccidum. Based on the results together with membrane lipid analysis of this alga, we discuss the evolution of glycolipid synthesis in photosynthetic organisms. This article is part of a Special Issue entitled: Plant Lipid Biology edited by Kent D. Chapman and Ivo Feussner. PMID:27108062

  18. Modelling metabolic evolution on phenotypic fitness landscapes: a case study on C4 photosynthesis.

    Science.gov (United States)

    Heckmann, David

    2015-12-01

    How did the complex metabolic systems we observe today evolve through adaptive evolution? The fitness landscape is the theoretical framework to answer this question. Since experimental data on natural fitness landscapes is scarce, computational models are a valuable tool to predict landscape topologies and evolutionary trajectories. Careful assumptions about the genetic and phenotypic features of the system under study can simplify the design of such models significantly. The analysis of C4 photosynthesis evolution provides an example for accurate predictions based on the phenotypic fitness landscape of a complex metabolic trait. The C4 pathway evolved multiple times from the ancestral C3 pathway and models predict a smooth 'Mount Fuji' landscape accordingly. The modelled phenotypic landscape implies evolutionary trajectories that agree with data on modern intermediate species, indicating that evolution can be predicted based on the phenotypic fitness landscape. Future directions will have to include structural changes of metabolic fitness landscape structure with changing environments. This will not only answer important evolutionary questions about reversibility of metabolic traits, but also suggest strategies to increase crop yields by engineering the C4 pathway into C3 plants.

  19. Process Design for Separating C4 Mixtures by Extractive Distillation

    Institute of Scientific and Technical Information of China (English)

    雷志刚; 陈标华; 李建伟

    2003-01-01

    C4 components are useful in industry and should be separated as individuals. A new process was proposed to separate them by extractive distillation, with the advantages of low equipment investment, energy consumption and liquid load in the columns. One principle to improve the extractive distillation process was put forward. Moreover, the analysis of operation state of the new process was done. There were eight operation states found for the whole process, but only one operation state was desirable. This work provides a way to effectively separate C4 mixtures and helps the reasonable utilization of C4 resource.

  20. Patterns and determinants of potential carbon gain in the C3 evergreen Yucca glauca (Liliaceae) in a C4 grassland.

    Science.gov (United States)

    Maragni, L A; Knapp, A K; McAllister, C A

    2000-02-01

    Yucca glauca is a C(3) evergreen rosette species locally common in the C(4)-dominated grasslands of the central Great Plains. Most congeners of Y. glauca are found in deserts, and Y. glauca's morphological similarities to desert species (steeply angled leaves, evergreen habit) may be critical to its success in grasslands. We hypothesized that the evergreen habit of Y. glauca, coupled with its ability to remain physiologically active at cool temperatures, would allow this species to gain a substantial portion of its annual carbon budget when the C(4) grasses are dormant. Leaf-level gas exchange was measured over an 18-mo period at Konza Prairie in northeast Kansas to assess the annual pattern of potential C gain. Two short-term experiments also were conducted in which nighttime temperatures were manipulated to assess the cold tolerance of this species. The annual pattern of C gain in Y. glauca was bimodal, with a spring productive period (maximum monthly photosynthetic rate = 21.1 ± 1.97 μmol·m·s) in March through June, a period of midseason photosynthetic depression, and a fall productive period in October (15.6 ± 1.25 μmol·m·s). The steeply angled leaves resulted in interception of photon flux density at levels above photosynthetic saturation throughout the year. Reduced photosynthetic rates in the summer may have been caused by low soil moisture, but temperature was strongly related (r = 0.37) to annual variations in photosynthesis, with nocturnal air temperatures below -5°C in the late fall and early spring, and high air temperatures (>32°C) in the summer, limiting gas exchange. Overall, 31% of the potential annual carbon gain in Y. glauca occurred outside the "frost-free" period (April-October) at Konza Prairie and 43% occurred when the dominant C(4) grasses were dormant. Future climates that include warmer minimum temperatures in the spring and fall may enhance the success of Y. glauca relative to the C(4) dominants in these grasslands. PMID:10675310

  1. Diurnal and Seasonal Variation in the Carbon Isotope Composition of Leaf- and Root- respired CO2 in C3 and C4 Species

    Science.gov (United States)

    Sun, W.; Resco, V.; Chen, S.; Williams, D. G.

    2008-12-01

    The carbon isotope signature of leaf (δ13Cl) and root (δ13Cr) dark- respired CO2 records and integrates short-term metabolic changes. Plants with C3 and C4 photosynthetic metabolism are expected to differ in diurnal and seasonal patterns in δ13Cl and δ13Cr because of differences in photorespiration, isotopic fractionation at metabolic branch points and allocation patterns. A thorough understanding of the environmental and metabolic controls on δ13Cl and δ13Cr is necessary to interpret the δ13C of ecosystem respired CO2 and partition the CO2 efflux into autotrophic and heterotrophic respiration sources. We measured δ13Cl in two C3 tree species (Prosopis velutina and Celtis reticulata), a C3 herb (Viguiera dentata) and a C4 grass (Sporobolus wrightii), and δ13Cr in P. velutina and S. wrightii in a semiarid savanna in southeastern Arizona, USA. δ13Cl during the dry pre-monsoon period was relatively enriched in 13C during daytime periods and became depleted in 13C at night relative to daytime values for all species with the exception of S. wrightii, the C4 grass. δ13Cl in S. wrightii was strongly influenced by seasonal differences in water availability with a larger diurnal amplitude in δ13Cl (8.2 +/- 0.6‰) during the wet monsoon period compared to that in the dry pre-monsoon period (4.4 +/- 0.4‰). The δ13C values of starch and lipid fractions remained constant over diurnal periods within the pre-monsoon and monsoon seasons. For C3 species, δ13Cl and δ13C of the cumulative, flux-weighted photosynthate pool estimated from gas exchange were strongly positively correlated, suggesting that progressive 13C-enrichment of leaf-respired CO2 during the daytime period resulted from changes in the δ13C signature of respiratory substrates associated with short-term changes in photosynthetic 13C discrimination. Rapid decreases in δ13Cl following the daytime period was likely caused by decreases in the ratio of PDH:acetyl-CoA oxidation rather than by a shift in

  2. Multiscale photosynthetic exciton transfer

    CERN Document Server

    Ringsmuth, A K; Stace, T M; 10.1038/nphys2332

    2012-01-01

    Photosynthetic light harvesting provides a natural blueprint for bioengineered and biomimetic solar energy and light detection technologies. Recent evidence suggests some individual light harvesting protein complexes (LHCs) and LHC subunits efficiently transfer excitons towards chemical reaction centers (RCs) via an interplay between excitonic quantum coherence, resonant protein vibrations, and thermal decoherence. The role of coherence in vivo is unclear however, where excitons are transferred through multi-LHC/RC aggregates over distances typically large compared with intra-LHC scales. Here we assess the possibility of long-range coherent transfer in a simple chromophore network with disordered site and transfer coupling energies. Through renormalization we find that, surprisingly, decoherence is diminished at larger scales, and long-range coherence is facilitated by chromophoric clustering. Conversely, static disorder in the site energies grows with length scale, forcing localization. Our results suggest s...

  3. Enzymatic Kinetic Properties of the Lactate Dehydrogenase Isoenzyme C4 of the Plateau Pika (Ochotona curzoniae

    Directory of Open Access Journals (Sweden)

    Yang Wang

    2016-01-01

    Full Text Available Testis-specific lactate dehydrogenase (LDH-C4 is one of the lactate dehydrogenase (LDH isozymes that catalyze the terminal reaction of pyruvate to lactate in the glycolytic pathway. LDH-C4 in mammals was previously thought to be expressed only in spermatozoa and testis and not in other tissues. Plateau pika (Ochotona curzoniae belongs to the genus Ochotona of the Ochotonidea family. It is a hypoxia-tolerant species living in remote mountain areas at altitudes of 3000–5000 m above sea level on the Qinghai-Tibet Plateau. Surprisingly, Ldh-c is expressed not only in its testis and sperm, but also in somatic tissues of plateau pika. To shed light on the function of LDH-C4 in somatic cells, Ldh-a, Ldh-b, and Ldh-c of plateau pika were subcloned into bacterial expression vectors. The pure enzymes of Lactate Dehydrogenase A4 (LDH-A4, Lactate Dehydrogenase B4 (LDH-B4, and LDH-C4 were prepared by a series of expression and purification processes, and the three enzymes were identified by the method of sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE and native polyacrylamide gel electrophoresis (PAGE. The enzymatic kinetics properties of these enzymes were studied by Lineweaver-Burk double-reciprocal plots. The results showed the Michaelis constant (Km of LDH-C4 for pyruvate and lactate was 0.052 and 4.934 mmol/L, respectively, with an approximate 90 times higher affinity of LDH-C4 for pyruvate than for lactate. At relatively high concentrations of lactate, the inhibition constant (Ki of the LDH isoenzymes varied: LDH-A4 (Ki = 26.900 mmol/L, LDH-B4 (Ki = 23.800 mmol/L, and LDH-C4 (Ki = 65.500 mmol/L. These data suggest that inhibition of lactate by LDH-A4 and LDH-B4 were stronger than LDH-C4. In light of the enzymatic kinetics properties, we suggest that the plateau pika can reduce reliance on oxygen supply and enhance its adaptation to the hypoxic environments due to increased anaerobic glycolysis by LDH-C4.

  4. C4d staining as immunohistochemical marker in inflammatory myopathies.

    Science.gov (United States)

    Pytel, Peter

    2014-10-01

    The diagnosis of an inflammatory myopathy is often established based on basic histologic studies. Additional immunohistochemical studies are sometimes required to support the diagnosis and the classification of inflammatory myopathies. Staining for major histocompatibility complex 1 (MHC1) often shows increased sarcolemmal labeling in inflammatory myopathies. Endomysial capillary staining C5b-9 (membrane attack complex) is a feature that is reported as frequently associated with dermatomyositis. Immunohistochemical staining for C4d is widely used for various applications including the assessment of antibody-mediated rejection after solid organ transplantation. In the context of dermatomyositis, C4d staining has been described in skin biopsies but not in muscle biopsies. A total of 32 muscle biopsy specimens were examined. The hematoxylin and eosin-stained slides were reviewed, and immunohistochemical studies for MHC1, C5b-9, and C4d were conducted. The staining observed for C5b-9 and C4d was compared. Overall, the staining pattern for C4d mirrored the one observed for C5b-9 in the examined muscle biopsy specimens. There was high and statistically significant (P<0.0001) correlation between the staining seen with these 2 antibodies. Both antibodies labeled the cytoplasm of degenerating necrotic myofibers. In addition, both antibodies showed distinct endomysial capillary labeling in a subset of dermatomyositis. Areas with perifascicular atrophy often exhibited the most prominent vascular labeling for C4d and C5b-9. In conclusion, C4d and C5b-9 show similar expression patterns in muscle biopsies of patients with inflammatory myopathies and both highlight the presence of vascular labeling associated with dermatomyositis. C4d antibodies are widely used and may offer an alternative for C5b-9 staining.

  5. Adaptive evolvement of information age C4ISR structure

    Institute of Scientific and Technical Information of China (English)

    Yushi Lan; Kebo Deng; Shaojie Mao; Heng Wang; Kan Yi; Ming Lei

    2015-01-01

    Command, control, communication, computing, intel-ligence, surveil ance and reconnaissance (C4ISR) in information age is a complex system whose structure always changes ac-tively or passively during the warfare. Therefore, it is important to optimize the structure, especial y in ambiguous and quick-tempo modern warfare. This paper proposes an adaptive evolvement mechanism for the C4ISR structure to survive the changeable warfare. Firstly, the information age C4ISR structure is defined and modeled based on the complex network theory. Secondly, taking the observe, orient, decide and act (OODA) model into consideration, four kinds of loops in the C4ISR structure are pro-posed and their coefficient of networked effects (CNE) is further defined. Then, the adaptive evolvement mechanisms of the four kinds of loops are presented respectively. Final y, taking the joint air-defense C4ISR as an example, simulation experiments are im-plemented, which validate the evolvement mechanism and show that the information age C4ISR structure has some characteristics of smal-world network and scale-free network.

  6. Enhanced tolerance to drought in transgenic rice plants overexpressing C4 photosynthesis enzymes

    Institute of Scientific and Technical Information of China (English)

    Jun-Fei; Gu; Ming; Qiu; Jian-Chang; Yang

    2013-01-01

    Maize-specific pyruvate orthophosphate dikinase(PPDK) was overexpressed in rice independently or in combination with the maize C4-specific phosphoenolpyruvate carboxylase(PCK). The wild-type(WT) cultivar Kitaake and transgenic plants were evaluated in independent field and tank experiments. Three soil moisture treatments,well-watered(WW), moderate drought(MD) and severe drought(SD), were imposed from 9d post-anthesis till maturity. Leaf physiological and biochemical traits, root activities,biomass, grain yield, and yield components in the untransformed WT and two transgenic rice lines(PPDK and PCK) were systematically studied. Compared with the WT, both transgenic rice lines showed increased leaf photosynthetic rate: by 20%–40% under WW, by45%–60% under MD, and by 80%–120% under SD. The transgenic plants produced 16.1%,20.2% and 20.0% higher grain yields than WT under the WW, MD and SD treatments,respectively. Under the same soil moisture treatments, activities of phosphoenolpyruvate carboxylase(PEPC) and carbonic anhydrase(CA) in transgenic plants were 3–5-fold higher than those in WT plants. Compared with ribulose-1,5-bisphosphate carboxylase, activities of PEPC and CA were less reduced under both MD and SD treatments. The transgenic plants also showed higher leaf water content, stomatal conductance, transpiration efficiency, and root oxidation activity and a stronger active oxygen scavenging system than the WT under all soil moisture treatments, especially MD and SD. The results suggest that drought tolerance is greatly enhanced in transgenic rice plants overexpressing C4photosynthesis enzymes. This study was performed under natural conditions and normal planting density to evaluate yield advantages on a field basis. It may open a new avenue to droughttolerance breeding via overexpression of C4enzymes in rice.

  7. Effect of sodium chloride on photosynthetic 14CO2 assimilation in Portulaca oleracea Linn

    International Nuclear Information System (INIS)

    Effect of NaCl on ion uptake, photosynthetic rate and photosynthetic products in a C4 non-CAM succulent, P. oleracea has been investigated. NaCl causes accumulation of Na as well as Cl ions with decrease in K and Ca contents. Chlorophylls and photosynthetic 14CO2 fixation rates are adversely affected due to sodium chloride salinity. Plants grown in the presence of NaCl show increase in C4 acid percentage with increase in labelling of organic acids in light. Labelling of amino acids (particularly alanine) and sugars (sucrose) is affected by NaCl. Enzyme studies reveal that PEP-carboxylase is stimulated at all concentrations of NaCl but higher concentrations affected the activity of RuBP-Carboxylase. (author)

  8. Functional recruitment of human complement inhibitor C4B-binding protein to outer membrane protein Rck of Salmonella.

    Directory of Open Access Journals (Sweden)

    Derek K Ho

    Full Text Available Resistance to complement mediated killing, or serum resistance, is a common trait of pathogenic bacteria. Rck is a 17 kDa outer membrane protein encoded on the virulence plasmid of Salmonella enterica serovars Typhimurium and Enteritidis. When expressed in either E. coli or S. enterica Typhimurium, Rck confers LPS-independent serum resistance as well as the ability to bind to and invade mammalian cells. Having recently shown that Rck binds the inhibitor of the alternative pathway of complement, factor H (fH, we hypothesized that Rck can also bind the inhibitor of the classical and lectin pathways, C4b-binding protein (C4BP. Using flow cytometry and direct binding assays, we demonstrate that E. coli expressing Rck binds C4BP from heat-inactivated serum and by using the purified protein. No binding was detected in the absence of Rck expression. C4BP bound to Rck is functional, as we observed factor I-mediated cleavage of C4b in cofactor assays. In competition assays, binding of radiolabeled C4BP to Rck was reduced by increasing concentrations of unlabeled protein. No effect was observed by increasing heparin or salt concentrations, suggesting mainly non-ionic interactions. Reduced binding of C4BP mutants lacking complement control protein domains (CCPs 7 or 8 was observed compared to wt C4BP, suggesting that these CCPs are involved in Rck binding. While these findings are restricted to Rck expression in E. coli, these data suggest that C4BP binding may be an additional mechanism of Rck-mediated complement resistance.

  9. PREPARATION OF IgA MONOCLONAL ANTIBODIES TO MURINE LACTIC DEHYDROGENASE-C4 (LDH-C4

    Institute of Scientific and Technical Information of China (English)

    FENGShu-Lin; BENKun-Long; LIANGZhi-Guo

    1989-01-01

    LDH--C4 is a sperm specific lactic dehydrogcnase in mammals and human, and is consid ered as a model molecule for contraceptive vaccine research. Significant contraceptive effects were observed in female mice, rabbits and baboons immunized with purified

  10. Density Functional Exploration of C4H3N Isomers.

    Science.gov (United States)

    Custer, Thomas; Szczepaniak, Urszula; Gronowski, Marcin; Fabisiewicz, Emilia; Couturier-Tamburelli, Isabelle; Kołos, Robert

    2016-07-28

    Molecules having C4H3N stoichiometry are of astrophysical interest. Two of these, methylcyanoacetylene (CH3C3N) and its structural isomer allenyl cyanide (H2CCCHN), have been observed in interstellar space, while several more have been examined in laboratories. Here we describe, for a broad range of C4H3N isomers, density functional calculations (B3LYP/aug-cc-pVTZ) of molecular parameters including the energetics, geometries, rotational constants, electric dipole moments, polarizabilities, vibrational IR frequencies, IR absorption intensities, and Raman activities. Singlet-triplet splittings as well as singlet vertical electronic excitation energies are given for selected species. The identification of less stable C4H3N molecules, generated in ongoing spectroscopic experiments, relies heavily on these quantum chemical predictions. PMID:27341606

  11. Regulation of Rubisco gene expression in C4 plants.

    Science.gov (United States)

    Berry, James O; Mure, Christopher M; Yerramsetty, Pradeep

    2016-06-01

    Ribulose-1,5-bisphosphate-carboxylase/oxygenase (Rubisco) incorporates inorganic carbon into an organic form, making this chloroplastic enzyme one of the most essential factors for all life on earth. Despite its central role in photosynthesis, research into regulation of the chloroplast rbcL and nuclear RbcS genes that encode this enzyme has lagged behind other plant gene systems. A major characteristic of kranz-type C4 plants is the accumulation of Rubisco only within chloroplasts of internalized bundle sheath cells that surround the leaf vascular centers. In plants that utilize the less common single cell C4 system, Rubisco accumulates only within one type of dimorphic chloroplasts localized to a specific region of leaf chlorenchyma cells. Understanding regulatory processes that restrict Rubisco gene expression to only one cell type or chloroplast type is a major focus of C4 research. Regulatory steps may include transcriptional, post-transcriptional, and post-translational processes. PMID:27026038

  12. Photosynthetic terpene hydrocarbon production for fuels and chemicals

    Energy Technology Data Exchange (ETDEWEB)

    Wang, X; Ort, DR; Yuan, JS

    2015-01-28

    Photosynthetic hydrocarbon production bypasses the traditional biomass hydrolysis process and represents the most direct conversion of sunlight energy into the next-generation biofuels. As a major class of biologically derived hydrocarbons with diverse structures, terpenes are also valuable in producing a variety of fungible bioproducts in addition to the advanced drop-in' biofuels. However, it is highly challenging to achieve the efficient redirection of photosynthetic carbon and reductant into terpene biosynthesis. In this review, we discuss four major scientific and technical barriers for photosynthetic terpene production and recent advances to address these constraints. Collectively, photosynthetic terpene production needs to be optimized in a systematic fashion, in which the photosynthesis improvement, the optimization of terpene biosynthesis pathway, the improvement of key enzymes and the enhancement of sink effect through terpene storage or secretion are all important. New advances in synthetic biology also offer a suite of potential tools to design and engineer photosynthetic terpene platforms. The systemic integration of these solutions may lead to disruptive' technologies to enable biofuels and bioproducts with high efficiency, yield and infrastructure compatibility.

  13. Photosynthetic terpene hydrocarbon production for fuels and chemicals.

    Science.gov (United States)

    Wang, Xin; Ort, Donald R; Yuan, Joshua S

    2015-02-01

    Photosynthetic hydrocarbon production bypasses the traditional biomass hydrolysis process and represents the most direct conversion of sunlight energy into the next-generation biofuels. As a major class of biologically derived hydrocarbons with diverse structures, terpenes are also valuable in producing a variety of fungible bioproducts in addition to the advanced 'drop-in' biofuels. However, it is highly challenging to achieve the efficient redirection of photosynthetic carbon and reductant into terpene biosynthesis. In this review, we discuss four major scientific and technical barriers for photosynthetic terpene production and recent advances to address these constraints. Collectively, photosynthetic terpene production needs to be optimized in a systematic fashion, in which the photosynthesis improvement, the optimization of terpene biosynthesis pathway, the improvement of key enzymes and the enhancement of sink effect through terpene storage or secretion are all important. New advances in synthetic biology also offer a suite of potential tools to design and engineer photosynthetic terpene platforms. The systemic integration of these solutions may lead to 'disruptive' technologies to enable biofuels and bioproducts with high efficiency, yield and infrastructure compatibility.

  14. Data of evolutionary structure change: 1C4XA-2OG1B [Confc[Archive

    Lifescience Database Archive (English)

    Full Text Available 1C4XA-2OG1B 1C4X 2OG1 A B ---TVEIIEKRFPSGT---LASHALVAGDPQSPAVVLLH...EEEEEEE HHHHHHHHHHHHH 0 1C4X... A 1C4XA FPSGT---LASHA ...645107269287 4.700198173522949 1 1C4X... A 1C4XA

  15. Morphisms from P2 to Gr(2,C4)

    CERN Document Server

    Mazouni, A El; Nagaraj, D S

    2009-01-01

    In this note we study morphisms from P2 to Gr(2,C4) from the point of view of the cohomology class they represent in the Grassmannian. This leads to some new result about projection of d-uple imbedding of P2 to P5.

  16. The potential of C4 grasses for cellulosic biofuel production

    NARCIS (Netherlands)

    Weijde, van der R.T.; Alvim Kamei, C.L.; Torres Salvador, A.F.; Vermerris, W.; Dolstra, O.; Visser, R.G.F.; Trindade, L.M.

    2013-01-01

    With the advent of biorefinery technologies enabling plant biomass to be processed into biofuel, many researchers set out to study and improve candidate biomass crops. Many of these candidates are C4 grasses, characterized by a high productivity and resource use efficiency. In this review the potent

  17. Estimating photosynthesis and concurrent export rates in C3 and C4 species at ambient and elevated CO2

    International Nuclear Information System (INIS)

    The ability of 21 C3 and C4 monocot and dicot species to rapidly export newly fixed C in the light at both ambient and enriched CO2 levels was compared. Photosynthesis and concurrent export rates were estimated during isotopic equilibrium of the transport sugars using a steady-state 14CO2-labeling procedure. At ambient CO2 photosynthesis and export rates for C3 species were 5 to 15 and 1 to 10 micromole C m-2 s-1, respectively, and 20 to 30 and 15 to 22 micromole C m-2 s-1, respectively, for C4 species. A linear regression plot of export on photosynthesis rate of all species had a correlation coefficient of 0.87. When concurrent export was expressed as a percentage of photosynthesis, several C3 dicots that produced transport sugars other than Suc had high efflux rates relative to photosynthesis, comparable to those of C4 species. At high CO2 photosynthetic and export rates were only slightly altered in C4 species, and photosynthesis increased but export rates did not in all C3 species. The C3 species that had high efflux rates relative to photosynthesis at ambient CO2 exported at rates comparable to those of C4 species on both an absolute basis and as a percentage of photosynthesis. At ambient CO2 there were strong linear relationships between photosynthesis, sugar synthesis, and concurrent export. However, at high CO2 the relationships between photosynthesis and export rate and between sugar synthesis and export rate were not as strong because sugars and starch were accumulated

  18. Carbon nanoscroll from C4H/C4F-type graphene superlattice: MD and MM simulation insights.

    Science.gov (United States)

    Liu, Zilong; Xue, Qingzhong; Tao, Yehan; Li, Xiaofang; Wu, Tiantian; Jin, Yakang; Zhang, Zhongyang

    2015-02-01

    Morphology manipulation opens up a new avenue for controlling and tailoring the functional properties of graphene, enabling the exploration of graphene-based nanomaterials. Through mixing single-side-hydrogenated graphene (C4H) with fluorinated graphene (C4F) on one single sheet, the C4H/C4F-type graphene superlattices can self-scroll at room temperature. We demonstrate using molecular dynamic (MD) simulations that different proportions, sizes, directions of hydrogenation and fluorination, and geometry of graphene have a great influence on the self-scrolling of superlattices into a variety of well-defined carbon nanoscrolls (CNSs), thus providing a controllable approach to tune their structures. Based on molecular mechanics (MM) simulations, the CNSs bear more than eight times the radial pressure than that of their multiwalled carbon nanotube (MWNT) counterparts, and an excellent radial elasticity of CNSs is also shown. Compared with conventional CNSs, these novel CNSs are endowed with more ample and flexible heterogeneous structures due to the on-demand hydrogenation and fluorination. Besides, this work provides a feasible route to achieve the necessary electronic and optical changes to be applied in graphene device applications.

  19. Still acting green: continued expression of photosynthetic genes in the heterotrophic Dinoflagellate Pfiesteria piscicida (Peridiniales, Alveolata.

    Directory of Open Access Journals (Sweden)

    Gwang Hoon Kim

    Full Text Available The loss of photosynthetic function should lead to the cessation of expression and finally loss of photosynthetic genes in the new heterotroph. Dinoflagellates are known to have lost their photosynthetic ability several times. Dinoflagellates have also acquired photosynthesis from other organisms, either on a long-term basis or as "kleptoplastids" multiple times. The fate of photosynthetic gene expression in heterotrophs can be informative into evolution of gene expression patterns after functional loss, and the dinoflagellates ability to acquire new photosynthetic function through additional endosymbiosis. To explore this we analyzed a large-scale EST database consisting of 151,091 unique sequences (29,170 contigs, 120,921 singletons obtained from 454 pyrosequencing of the heterotrophic dinoflagellate Pfiesteria piscicida. About 597 contigs from P. piscicida showed significant homology (E-value photosynthetic function. Most of the genes involved in the Calvin-Benson cycle were found, genes of the light-dependent reaction were also identified. Also genes of associated pathways including the chorismate pathway and genes involved in starch metabolism were discovered. BLAST searches and phylogenetic analysis suggest that these plastid-associated genes originated from several different photosynthetic ancestors. The Calvin-Benson cycle genes are mostly associated with genes derived from the secondary plastids of peridinin-containing dinoflagellates, while the light-harvesting genes are derived from diatoms, or diatoms that are tertiary plastids in other dinoflagellates. The continued expression of many genes involved in photosynthetic pathways indicates that the loss of transcriptional regulation may occur well after plastid loss and could explain the organism's ability to "capture" new plastids (i.e. different secondary endosymbiosis or tertiary symbioses to renew photosynthetic function.

  20. 现代画家 GRAND C4 PICASSO

    Institute of Scientific and Technical Information of China (English)

    小米

    2009-01-01

    为自己的家添置一辆MPV。在现阶段也许并不能成为主流。但这类车所代表的一种生活态度,却已经令很多家庭神往。不过大C4毕加索告诉我们:这种生活其实离我们并不遥远。

  1. Bondage Numbers of C4 Bundles over a Cycle Cn

    OpenAIRE

    Moo Young Sohn; Fu-Tao Hu; Jaeun Lee

    2013-01-01

    Graph bundles generalize the notion of covering graphs and graph products. Graph bundles have been applied in computer architecture and communication networks. The bondage number is an important parameter for measuring the vulnerability and stability of the network domination under link failure. The bondage number $b\\left(G\\right)$ of a graph $G$ is the minimum number of edges whose removal enlarges the domination number. In this paper, we show that the bondage number of every ${C}_{4}$ bu...

  2. Anticancer effects of oligomeric proanthocyanidins on human colorectal cancer cell line, SNU-C4

    Institute of Scientific and Technical Information of China (English)

    Youn-Jung Kim; Hae-Jeong Park; Seo-Hyun Yoon; Mi-Ja Kim; Kang-Hyun Leem; Joo-Ho Chung; Hye-Kyung Kim

    2005-01-01

    AIM: Oligomeric proanthocyanidins (OPC), natural polyphenolic compounds found in plants, are known to have antioxidant and anti-cancer effects. We investigated whether the anti-cancer effects of the OPC are induced by apoptosis on human colorectal cancer cell line, SNU-C4.METHODS: Colorectal cancer cell line, SNU-C4 was cultured in RPMI 1640 medium supplemented with 10% fetal bovine serum. The cytotoxic effect of OPC was assessed by 3-(4, 5-dimethylthiazol-2-yl)-2, 5-diphenylt-etrazolium bromide (MTT) assay. To find out the apoptotic cell death, 4, 6-diamidino-2-phenylindole (DAPI) staining,terminal deoxynucleotidyl transferase (TdT)-mediated dUTP nick end labeling (TUNEL) assay, reverse transcriptionpolymerase chain reaction (RT-PCR), and caspase-3 enzyme assay were performed.RESULTS: In this study, cytotoxic effect of OPC on SNUC4 cells appeared in a dose-dependent manner. OPC treatment (100 μg/mL) revealed typical morphological apoptotic features. Additionally OPC treatment (100 μg/mL)increased level of BAX and CASPASE-3, and decreased level of BCL-2 mRNA expression. Caspase-3 enzyme activity was also significantly increased by treatment of OPC (100 μg/mL) compared with control.CONCLUSION: These data indicate that OPC caused cell death by apoptosis through caspase pathways on human colorectal cancer cell line, SNU-C4.

  3. Cometary coma chemical composition (C4) mission. [Abstract only

    Science.gov (United States)

    Carle, G. C.; Clark, B. C.; Niemann, H. B.; Alexander, M.; Knocke, P. C.; O'Hara, B. J.

    1994-01-01

    Cometary missions are of enormous fundamental importance for many different space science disciplines, including exobiology. Comets are presumed relics of the earliest, most primitive material in the solar nebula and are related to the planetesimals. They undoubtedly provided a general enrichment of volatiles to the inner solar system (contributing to atmospheres and oceans) and may have been key to the origin of life. A Discovery class, comet rendezvous mission, the Cometary Coma Chemical Composition (C4) Mission, was selected for further study by NASA earlier this year. The C4 Mission is a highly focused and usefully-limited subset of the Cometary Rendezvous Asteroid Flyby (CRAF) Mission, concentrating exclusively on measurements which will lead to an understanding of the chemical composition and make-up of the cometary nucleus. The scientific goals of the Cometary Coma Chemical Composition (C4) Mission are to rendezvous with a short-period comet and (1) to determine the elemental, chemical, and isotopic composition of the nucleus and (2) to characterize the chemical and isotopic nature of its atmosphere. Further, it is a goal to obtain preliminary data on the development of the coma (dust and gas composition) as a function of time and orbital position.

  4. Regulation of Electron Transport in Photosystems I and II in C3, C3-C4, and C4 Species of Panicum in Response to Changing Irradiance and O2 Levels.

    Science.gov (United States)

    Peterson, R. B.

    1994-05-01

    Regulation of the quantum yields of linear electron transport and photosystem II photochemistry ([phi]II) with changing irradiance and gas-phase O2 concentration was studied in leaf tissue from Panicum bisulcatum (C3), Panicum milioides (C3-C4), and Panicum antidotale (C4) at 200 [mu]bars of CO2 and 25[deg]C using infrared gas analysis and chlorophyll fluorescence yield measurements. When the O2 level was increased from 14 to 213 mbars at high irradiance, [phi]II increased by as much as 115% in P. bisulcatum but by no more than 17% in P. antidotale. Under the same conditions [phi]II increased to an intermediate degree in P. milioides. Measurements of accumulation of the photooxidized form of the photosystem I reaction center (P700+) based on the light-dependent in vivo absorbance change at 830 nm indicate that the steady-state concentration of P700+ varied in an antiparallel manner with [phi]II when either the irradiance or O2 concentration was changed. Hence, O2-dependent changes in [phi]II were indicative of variations in linear photosynthetic electron transport. These experiments revealed, however, that a significant capacity was retained for in vivo regulation of the apparent quantum yield of photosystem I ([phi]I) independently of [phi]II+ Coordinate regulation of quantum yields of photosystems I and II (expressed as [phi]I:[phi]II in response to changing irradiance and O2 level differed markedly for the C3 and C4 species, and the response for the C3-C4 species most closely resembled that observed for the C4 species. The fraction of total linear electron transport supporting photorespiration at 213 mbars of O2 was negligible in the C4 species and was 13% lower in the C3-C4 species relative to the C3 species as calculated from fluorescence and gas-exchange determinations. At high photon-flux rates and high O2 concentration, the potential benefit to light use for net CO2 uptake arising from lower photorespiration in P. milioides was offset by a reduced capacity

  5. Inactivation of C4orf26 in toothless placental mammals.

    Science.gov (United States)

    Springer, Mark S; Starrett, James; Morin, Phillip A; Lanzetti, Agnese; Hayashi, Cheryl; Gatesy, John

    2016-02-01

    Previous studies have reported inactivated copies of six enamel-related genes (AMBN, AMEL, AMTN, ENAM, KLK4, MMP20) and one dentin-related gene (DSPP) in one or more toothless vertebrates and/or vertebrates with enamelless teeth, thereby providing evidence that these genes are enamel or tooth-specific with respect to their critical functions that are maintained by natural selection. Here, we employ available genome sequences for edentulous and enamelless mammals to evaluate the enamel specificity of four genes (WDR72, SLC24A4, FAM83H, C4orf26) that have been implicated in amelogenesis imperfecta, a condition in which proper enamel formation is abrogated during tooth development. Coding sequences for WDR72, SCL24A4, and FAM83H are intact in four edentulous taxa (Chinese pangolin, three baleen whales) and three taxa (aardvark, nine-banded armadillo, Hoffmann's two-toed sloth) with enamelless teeth, suggesting that these genes have critical functions beyond their involvement in tooth development. By contrast, genomic data for C4orf26 reveal inactivating mutations in pangolin and bowhead whale as well as evidence for deletion of this gene in two minke whale species. Hybridization capture of exonic regions and PCR screens provide evidence for inactivation of C4orf26 in eight additional baleen whale species. However, C4orf26 is intact in all three species with enamelless teeth that were surveyed, as well as in 95 additional mammalian species with enamel-capped teeth. Estimates of selection intensity suggest that dN/dS ratios on branches leading to taxa with enamelless teeth are similar to the dN/dS ratio on branches leading to taxa with enamel-capped teeth. Based on these results, we conclude that C4orf26 is tooth-specific, but not enamel-specific, with respect to its essential functions that are maintained by natural selection. A caveat is that an alternative splice site variant, which translates exon 3 in a different reading frame, is putatively functional in

  6. Inactivation of C4orf26 in toothless placental mammals.

    Science.gov (United States)

    Springer, Mark S; Starrett, James; Morin, Phillip A; Lanzetti, Agnese; Hayashi, Cheryl; Gatesy, John

    2016-02-01

    Previous studies have reported inactivated copies of six enamel-related genes (AMBN, AMEL, AMTN, ENAM, KLK4, MMP20) and one dentin-related gene (DSPP) in one or more toothless vertebrates and/or vertebrates with enamelless teeth, thereby providing evidence that these genes are enamel or tooth-specific with respect to their critical functions that are maintained by natural selection. Here, we employ available genome sequences for edentulous and enamelless mammals to evaluate the enamel specificity of four genes (WDR72, SLC24A4, FAM83H, C4orf26) that have been implicated in amelogenesis imperfecta, a condition in which proper enamel formation is abrogated during tooth development. Coding sequences for WDR72, SCL24A4, and FAM83H are intact in four edentulous taxa (Chinese pangolin, three baleen whales) and three taxa (aardvark, nine-banded armadillo, Hoffmann's two-toed sloth) with enamelless teeth, suggesting that these genes have critical functions beyond their involvement in tooth development. By contrast, genomic data for C4orf26 reveal inactivating mutations in pangolin and bowhead whale as well as evidence for deletion of this gene in two minke whale species. Hybridization capture of exonic regions and PCR screens provide evidence for inactivation of C4orf26 in eight additional baleen whale species. However, C4orf26 is intact in all three species with enamelless teeth that were surveyed, as well as in 95 additional mammalian species with enamel-capped teeth. Estimates of selection intensity suggest that dN/dS ratios on branches leading to taxa with enamelless teeth are similar to the dN/dS ratio on branches leading to taxa with enamel-capped teeth. Based on these results, we conclude that C4orf26 is tooth-specific, but not enamel-specific, with respect to its essential functions that are maintained by natural selection. A caveat is that an alternative splice site variant, which translates exon 3 in a different reading frame, is putatively functional in

  7. Cloning of PEPC-1 from a C4 halophyte Suaeda aralocaspica without Kranz anatomy and its recombinant enzymatic activity in responses to abiotic stresses.

    Science.gov (United States)

    Cheng, Gang; Wang, Lu; Lan, Haiyan

    2016-02-01

    Phosphoenolpyruvate carboxylase (PEPC) is a key enzyme of C4 photosynthetic pathway and plays an important biochemical role in higher plants and micro organisms. To gain understanding of the role of PEPC in stress adaptation in plant, we cloned PEPC gene from Suaeda aralocaspica, a C4 species without Kranz anatomy, and performed a series of experiments with PEPC gene expressed in Escherichia coli under various abiotic stresses. Results showed that, based on the homology cloning and 5'-RACE technique, the full-length cDNA sequence of PEPC (2901 bp) from S. aralocaspica was obtained, which shares the typical conserved domains to documented PEPCs and was identified as PEPC-1 in accord to the reported partial sequence (ppc-1) in S. aralocaspica. qRT-PCR analysis revealed the expression patterns of PEPC-1 and PEPC-2 (known as ppc-2, another plant type of PEPC) in S. aralocaspica, suggesting that PEPC-1 was up-regulated during seed germination and under NaCl stress, and presented higher level in chlorenchyma than other tissues, which were significantly different with PEPC-2. Afterwards, PEPC-1 was recombinant in E. coli (pET-28a-PEPC) and expressed as an approximate 110 kDa protein. Under various abiotic stresses, the recombinant E. coli strain harboring with PEPC-1 showed significant advantage in growth at 400-800 mmol L(-1) NaCl, 10-20% PEG6000, 25 and 30 °C lower temperature, 50-200 μmol L(-1) methyl viologen, and pH 5.0 and 9.0 condition, compared to control. Further analysis of the enzymatic characteristics of the recombinant PEPC-1 suggests that it was the higher enzyme activity of PEPC-1 which might confer the stress tolerance to E. coli. We speculate that over expression of PEPC-1 is probably related to regulation of oxaloacetate (OAA) in tricarboxylic acid (TCA) cycle in E. coli, which may contribute to further understanding of the physiological function of PEPC in S. aralocaspica. PMID:26777251

  8. Regulatory RNAs in photosynthetic cyanobacteria.

    Science.gov (United States)

    Kopf, Matthias; Hess, Wolfgang R

    2015-05-01

    Regulatory RNAs play versatile roles in bacteria in the coordination of gene expression during various physiological processes, especially during stress adaptation. Photosynthetic bacteria use sunlight as their major energy source. Therefore, they are particularly vulnerable to the damaging effects of excess light or UV irradiation. In addition, like all bacteria, photosynthetic bacteria must adapt to limiting nutrient concentrations and abiotic and biotic stress factors. Transcriptome analyses have identified hundreds of potential regulatory small RNAs (sRNAs) in model cyanobacteria such as Synechocystis sp. PCC 6803 or Anabaena sp. PCC 7120, and in environmentally relevant genera such as Trichodesmium, Synechococcus and Prochlorococcus. Some sRNAs have been shown to actually contain μORFs and encode short proteins. Examples include the 40-amino-acid product of the sml0013 gene, which encodes the NdhP subunit of the NDH1 complex. In contrast, the functional characterization of the non-coding sRNA PsrR1 revealed that the 131 nt long sRNA controls photosynthetic functions by targeting multiple mRNAs, providing a paradigm for sRNA functions in photosynthetic bacteria. We suggest that actuatons comprise a new class of genetic elements in which an sRNA gene is inserted upstream of a coding region to modify or enable transcription of that region.

  9. Heterosis of maize photosynthetic performance

    Institute of Scientific and Technical Information of China (English)

    LI Xia; DING Zaisong; LI Lianlu; WANG Meiyun; ZHAO Ming

    2007-01-01

    Four maize inbred lines with different photosyn-thetic rates and their two hybrids were used as test materials,and the diurnal variations of their photosynthesis parameters in the silking stage were measured to study the heterosis of photosynthetic performance.Results showed that net photo-synthetic rate (In),transpiration rate (Tr) and stomatal conductance (Gs) all presented an obvious single-peaked curve in a day,with the peak values occurring at 10:00-12:00,12:00,10:00-12:00 a.m.,respectively,while water use efficiency (WUE) had a"V"type variant trend,with the lowest value appearing at 12:00.The diurnal variation of Pn and Tr was correlated markedly with Gs,suggesting that Gs played an important role in regulating the diurnal variation of Pn and Tr,and Pn,Tr and Gs had a higher heterosis in the afternoon than in the morning,while the WUE was in reverse,indicating that maize hybrid had higher resistance to the high temperature and dehydration in the afternoon,which provided a new path to select varieties with a high net photosynthetic rate.

  10. The potential of C4 grasses for cellulosic biofuel production

    Directory of Open Access Journals (Sweden)

    Tim eWeijde

    2013-05-01

    Full Text Available With the advent of biorefinery technologies enabling plant biomass to be processed into biofuel, many researchers set out to study and improve candidate biomass crops. Many of these candidates are C4 grasses, characterized by a high productivity and resource use efficiency. In this review the potential of five C4 grasses as lignocellulose feedstock for biofuel production is discussed. These include three important field crops - maize, sugarcane and sorghum - and two undomesticated perennial energy grasses - miscanthus and switchgrass. Although all these grasses are high yielding, they produce different products. While miscanthus and switchgrass are exploited exclusively for lignocellulosic biomass, maize, sorghum and sugarcane are dual-purpose crops. It is unlikely that all the prerequisites for the sustainable and economic production of biomass for a global cellulosic biofuel industry will be fulfilled by a single crop. High and stable yields of lignocellulose are required in diverse environments worldwide, to sustain a year-round production of biofuel. A high resource use efficiency is indispensable to allow cultivation with minimal inputs of nutrients and water and the exploitation of marginal soils for biomass production. Finally, the lignocellulose composition of the feedstock should be optimized to allow its efficient conversion into biofuel and other by-products. Breeding for these objectives should encompass diverse crops, to meet the demands of local biorefineries and provide adaptability to different environments. Collectively, these C4 grasses are likely to play a central role in the supply of lignocellulose for the cellulosic ethanol industry. Moreover, as these species are evolutionary closely related, advances in each of these crops will expedite improvements in the other crops. This review aims to provide an overview of their potential, prospects and research needs as lignocellulose feedstocks for the commercial production of

  11. Bondage Numbers of C4 Bundles over a Cycle Cn

    Directory of Open Access Journals (Sweden)

    Moo Young Sohn

    2013-01-01

    Full Text Available Graph bundles generalize the notion of covering graphs and graph products. Graph bundles have been applied in computer architecture and communication networks. The bondage number is an important parameter for measuring the vulnerability and stability of the network domination under link failure. The bondage number b(G of a graph G is the minimum number of edges whose removal enlarges the domination number. In this paper, we show that the bondage number of every C4 bundles over a cycle Cn  (n≥4 is equal to 4.

  12. 118-C-4 Horizontal Rod Cave characterization plan

    International Nuclear Information System (INIS)

    This characterization plan provides instructions for obtaining and analyzing samples for waste designation and disposal. The 118-C-4 Horizontal Rod Cave is located in the 100-C Area about 328 ft (100 m) southeast of the 105-C Reactor (Figure 1). The 118-C-4 Horizontal Rod Cave (Figure 2) is a reinforced concrete bunker approximately 70- ft (21.3-m) long, 7-ft (2.1-m) high, and 12-ft (3.6-m) wide, with triangular-shaped concrete ends 3-ft (0.9-m) high. The rod cave was used to store radiologically contaminated control-rod tips. If control rod tips are present, release of control rod activation products will not change expectations with respect to principal contaminants. The north portion of the cave is empty and the south portion contains two aluminum tubes that may contain rod tips (Figure 3). The caves are contaminated with activation and fission products (e.g., 60Co and 137Cs) common to the 100 Areas (see Appendix for data). Dose rates up to 0.7 mR/hr were measured in the south cave and 0.5 mR/hr in the north cave during an inspection of the facility in December 1996

  13. Structural differences between the two human complement C4 isotypes affect the humoral immune response

    OpenAIRE

    1992-01-01

    An animal model has been used to address the question of the biological importance of the known structural difference between the two isotypes of human C4, i.e., C4A and C4B. Guinea pigs deficient in C4 were reconstituted transiently with either human C4A or C4B protein and immunized with the bacteriophage phi X174. Results from this study showed that C4A-reconstituted animals made a secondary response, i.e., switch from IgM to IgG; whereas the C4B-reconstituted animals did not.

  14. Identification of Associations between Bacterioplankton and Photosynthetic Picoeukaryotes in Coastal Waters

    Directory of Open Access Journals (Sweden)

    Hanna Maria Farnelid

    2016-03-01

    Full Text Available Photosynthetic picoeukaryotes are significant contributors to marine primary productivity. Associations between marine bacterioplankton and picoeukaryotes frequently occur and can have large biogeochemical impacts. We used flow cytometry to sort cells from seawater to identify non-eukaryotic phylotypes that are associated with photosynthetic picoeukaryotes. Samples were collected at the Santa Cruz wharf on Monterey Bay, California during summer and fall, 2014. The phylogeny of associated microbes was assessed through 16S rRNA gene amplicon clone and Illumina MiSeq libraries. The most frequently detected bacterioplankton phyla within the photosynthetic picoeukaryote sorts were Proteobacteria (Alphaproteobacteria and Gammaproteobacteria and Bacteroidetes. Intriguingly, the presence of free-living bacterial genera in the photosynthetic picoeukaryote sorts could suggest that some of the photosynthetic picoeukaryotes were mixotrophs. However, the occurrence of bacterial sequences, which were not prevalent in the corresponding bulk seawater samples, indicates that there was also a selection for specific OTUs in association with photosynthetic picoeukaryotes suggesting specific functional associations. The results show that diverse bacterial phylotypes are found in association with photosynthetic picoeukaryotes. Taxonomic identification of these associations is a prerequisite for further characterizing and to elucidate their metabolic pathways and ecological functions.

  15. Phytochromes in photosynthetically competent plants

    Energy Technology Data Exchange (ETDEWEB)

    Pratt, L.H.

    1990-07-01

    Plants utilize light as a source of information in photomorphogenesis and of free energy in photosynthesis, two processes that are interrelated in that the former serves to increase the efficiency with which plants can perform the latter. Only one pigment involved in photomorphogenesis has been identified unequivocally, namely phytochrome. The thrust of this proposal is to investigate this pigment and its mode(s) of action in photosynthetically competent plants. Our long term objective is to characterize phytochrome and its functions in photosynthetically competent plants from molecular, biochemical and cellular perspectives. It is anticipated that others will continue to contribute indirectly to these efforts at the physiological level. The ultimate goal will be to develop this information from a comparative perspective in order to learn whether the different phytochromes have significantly different physicochemical properties, whether they fulfill independent functions and if so what these different functions are, and how each of the different phytochromes acts at primary molecular and cellular levels.

  16. Photosynthetic H2 metabolism in Chlamydomonas reinhardtii (unicellular green algae).

    Science.gov (United States)

    Melis, Anastasios

    2007-10-01

    Unicellular green algae have the ability to operate in two distinctly different environments (aerobic and anaerobic), and to photosynthetically generate molecular hydrogen (H2). A recently developed metabolic protocol in the green alga Chlamydomonas reinhardtii permitted separation of photosynthetic O2-evolution and carbon accumulation from anaerobic consumption of cellular metabolites and concomitant photosynthetic H2-evolution. The H2 evolution process was induced upon sulfate nutrient deprivation of the cells, which reversibly inhibits photosystem-II and O2-evolution in their chloroplast. In the absence of O2, and in order to generate ATP, green algae resorted to anaerobic photosynthetic metabolism, evolved H2 in the light and consumed endogenous substrate. This study summarizes recent advances on green algal hydrogen metabolism and discusses avenues of research for the further development of this method. Included is the mechanism of a substantial tenfold starch accumulation in the cells, observed promptly upon S-deprivation, and the regulated starch and protein catabolism during the subsequent H2-evolution. Also discussed is the function of a chloroplast envelope-localized sulfate permease, and the photosynthesis-respiration relationship in green algae as potential tools by which to stabilize and enhance H2 metabolism. In addition to potential practical applications of H2, approaches discussed in this work are beginning to address the biochemistry of anaerobic H2 photoproduction, its genes, proteins, regulation, and communication with other metabolic pathways in microalgae. Photosynthetic H2 production by green algae may hold the promise of generating a renewable fuel from nature's most plentiful resources, sunlight and water. The process potentially concerns global warming and the question of energy supply and demand. PMID:17721788

  17. Oligomerization of C4 Fraction from FCCU on ZSM-5

    Institute of Scientific and Technical Information of China (English)

    Wu Zhiguo; Zhang Jiushun

    2004-01-01

    In order to make more liquid products like gasoline, the oligomerition of a C4 feedstock taking place on catalyst containing ZSM-5 was studied in a pressurized reactor. The products were C5- gas, liquid hydrocarbons and coke. During the reaction on the catalyst BO-l, when the WHSV was 0.71h-1 and total pressure was 4.0MPa, the C5+ product yield reached a maximum at a temperature around 320℃. As oligomerization reaction was the dominating one, there were minor C9 hydrocarbons in liquid products and the main products were C7 and C8 olefins and n- C10 paraffins. When the temperature was higher than 286C, a small amount of C9hydrocarbons was formed and more normal and isomeric paraffins other than olefins were formed in products.Gasoline yield increased linearly with a rising total pressure under the same operating conditions.

  18. Leukotriene C4 biosynthesis in isolated August rat peritoneal leukocytes

    Directory of Open Access Journals (Sweden)

    J. M. Huebner

    1996-01-01

    Full Text Available The mixed leukocyte population obtained from the peritoneum of the August rat is a potentially important experimental model of inherent eosinophilia that has not been well characterized. In the present study, isolated cell preparations generated a concentration-dependent release of leukotriene (LT C4 when exposed to the Ca2+ ionophore A23187, reaching maximal stimulation at 5.0 μM. This response was inhibited by the 5-lipoxygenase activating protein antagonist MK-886 (0.1 μM, nominally Ca2+ and Mg2+-free incubation media and by activation of protein kinase C via phorbol 12-myristate 13-acetate (50 nM. These findings establish a model system for investigating LTC4 profiles contingent with innate peritoneal eosinophilia and are consistent with the hypothesis that cellular LTC4 biosynthesis is phosphoregulated.

  19. Simulation of the Reflected Blast Wave froma C-4 Charge

    Energy Technology Data Exchange (ETDEWEB)

    Howard, W M; Kuhl, A L; Tringe, J W

    2011-08-01

    The reflection of a blast wave from a C4 charge detonated above a planar surface is simulated with our ALE3D code. We used a finely-resolved, fixed Eulerian 2-D mesh (167 {micro}m per cell) to capture the detonation of the charge, the blast wave propagation in nitrogen, and its reflection from the surface. The thermodynamic properties of the detonation products and nitrogen were specified by the Cheetah code. A programmed-burn model was used to detonate the charge at a rate based on measured detonation velocities. Computed pressure histories are compared with pressures measured by Kistler 603B piezoelectric gauges at 8 ranges (GR = 0, 2, 4, 8, 10, and 12 inches) along the reflecting surface. Computed and measured waveforms and positive-phase impulses were similar, except at close-in ranges (GR < 2 inches), which were dominated by jetting effects.

  20. Light-enhanced dark respiration in leaves, isolated cells and protoplasts of various types of C4 plants.

    Science.gov (United States)

    Parys, Eugeniusz; Jastrzebski, Hubert

    2006-04-01

    The rate of respiratory CO2 evolution from the leaves of Zea mays, Panicum miliaceum, and Panicum maximum, representing NADP-ME, NAD-ME, and PEP-CK types of C4 plants, respectively, was increased by approximately two to four times after a period of photosynthesis. This light-enhanced dark respiration (LEDR) was a function of net photosynthetic rate specific to plant species, and was depressed by 1% O2. When malate, aspartate, oxaloacetate or glycine solution at 50 mM concentration was introduced into the leaves instead of water, the rate of LEDR was enhanced, far less in Z. mays (by 10-25%) than in P. miliaceum (by 25-35%) or P. maximum (by 40-75%). The enhancement of LEDR under glycine was relatively stable over a period of 1 h, whereas the remaining metabolites caused its decrease following a transient increase. The metabolites reduced the net photosynthesis rate in the two Panicum species, but not in Z. mays, where this process was stimulated by glycine. The bundle sheath cells from P. miliaceum exhibited a higher rate of LEDR than those of Z. mays and P. maximum. Glycine had no effect on the respiration rate of the cells, but malate increased in cells of Z. mays and P. miliaceum by about 50% and 30%, respectively. With the exception of aspartate, which stimulated both the O2 evolution and O2 uptake in P. maximum, the remaining metabolites reduced photosynthetic O2 evolution from bundle sheath cells in Panicun species. The net O2 exchange in illuminated cells of Z. mays did not respond to CO2 or metabolites. Leaf mesophyll protoplasts of Z. mays and P. miliaceum, and bundle sheath protoplasts of Z. mays, which are unable to fix CO2 photosynthetically, also produced LEDR, but the mesophyll protoplasts, compared with bundle sheath protoplasts, required twice the time of illumination to obtain the maximal rate. The results suggest that the substrates for LEDR in C4 plants are generated during a period of illumination not only via the Calvin cycle reactions, but

  1. Light-enhanced dark respiration in leaves, isolated cells and protoplasts of various types of C4 plants.

    Science.gov (United States)

    Parys, Eugeniusz; Jastrzebski, Hubert

    2006-04-01

    The rate of respiratory CO2 evolution from the leaves of Zea mays, Panicum miliaceum, and Panicum maximum, representing NADP-ME, NAD-ME, and PEP-CK types of C4 plants, respectively, was increased by approximately two to four times after a period of photosynthesis. This light-enhanced dark respiration (LEDR) was a function of net photosynthetic rate specific to plant species, and was depressed by 1% O2. When malate, aspartate, oxaloacetate or glycine solution at 50 mM concentration was introduced into the leaves instead of water, the rate of LEDR was enhanced, far less in Z. mays (by 10-25%) than in P. miliaceum (by 25-35%) or P. maximum (by 40-75%). The enhancement of LEDR under glycine was relatively stable over a period of 1 h, whereas the remaining metabolites caused its decrease following a transient increase. The metabolites reduced the net photosynthesis rate in the two Panicum species, but not in Z. mays, where this process was stimulated by glycine. The bundle sheath cells from P. miliaceum exhibited a higher rate of LEDR than those of Z. mays and P. maximum. Glycine had no effect on the respiration rate of the cells, but malate increased in cells of Z. mays and P. miliaceum by about 50% and 30%, respectively. With the exception of aspartate, which stimulated both the O2 evolution and O2 uptake in P. maximum, the remaining metabolites reduced photosynthetic O2 evolution from bundle sheath cells in Panicun species. The net O2 exchange in illuminated cells of Z. mays did not respond to CO2 or metabolites. Leaf mesophyll protoplasts of Z. mays and P. miliaceum, and bundle sheath protoplasts of Z. mays, which are unable to fix CO2 photosynthetically, also produced LEDR, but the mesophyll protoplasts, compared with bundle sheath protoplasts, required twice the time of illumination to obtain the maximal rate. The results suggest that the substrates for LEDR in C4 plants are generated during a period of illumination not only via the Calvin cycle reactions, but

  2. Structural, biochemical, and physiological characterization of C4 photosynthesis in species having two vastly different types of kranz anatomy in genus Suaeda (Chenopodiaceae).

    Science.gov (United States)

    Voznesenskaya, E V; Chuong, S D X; Koteyeva, N K; Franceschi, V R; Freitag, H; Edwards, G E

    2007-11-01

    C (4) species of family Chenopodiaceae, subfamily Suaedoideae have two types of Kranz anatomy in genus Suaeda, sections Salsina and Schoberia, both of which have an outer (palisade mesophyll) and an inner (Kranz) layer of chlorenchyma cells in usually semi-terete leaves. Features of Salsina (S. AEGYPTIACA, S. arcuata, S. taxifolia) and Schoberia type (S. acuminata, S. Eltonica, S. cochlearifoliA) were compared to C (3) type S. Heterophylla. In Salsina type, two layers of chlorenchyma at the leaf periphery surround water-storage tissue in which the vascular bundles are embedded. In leaves of the Schoberia type, enlarged water-storage hypodermal cells surround two layers of chlorenchyma tissue, with the latter surrounding the vascular bundles. The chloroplasts in Kranz cells are located in the centripetal position in Salsina type and in the centrifugal position in the Schoberia type. Western blots on C (4) acid decarboxylases show that both Kranz forms are NAD-malic enzyme (NAD-ME) type C (4) species. Transmission electron microscopy shows that mesophyll cells have chloroplasts with reduced grana, while Kranz cells have chloroplasts with well-developed grana and large, specialized mitochondria, characteristic of NAD-ME type C (4) chenopods. In both C (4) types, phosphoenolpyruvate carboxylase is localized in the palisade mesophyll, and Rubisco and mitochondrial NAD-ME are localized in Kranz cells, where starch is mainly stored. The C (3) species S. heterophylla has Brezia type isolateral leaf structure, with several layers of Rubisco-containing chlorenchyma. Photosynthetic response curves to varying CO (2) and light in the Schoberia Type and Salsina type species were similar, and typical of C (4) plants. The results indicate that two structural forms of Kranz anatomy evolved in parallel in species of subfamily Suaedoideae having NAD-ME type C (4) photosynthesis.

  3. Study on C4AF Crystal Structure by EBSD%利用EBSD研究C4AF的晶体结构

    Institute of Scientific and Technical Information of China (English)

    田键; 徐海军; 危涛; 高慧娟; 王金地; 赵晓宇; 贺金

    2012-01-01

    The crystal structure in C4AF was studied by EBSD, and related data of C4AF crystal studied and got by Bertaut, et al. Sagnieres in the inorganic crystal structure database were referenced, a C4AF crystal electron backscatter scattering diffraction crystallographic database file was established. EBSD phase identification test of sample was done, C4AF was the main crystal phase, and the database file could be used to calibrate backscattered Kikuchi diffraction pattern of C4AF sample very well via EBSD test analysis and inspection. According to cell parameters, space group and atomic coordinates for C4AF, three-dimensional model of C4AF crystal structure was also built.%利用EBSD研究C4AF的晶体结构,参考无机晶体结构数据库中,Bertaut等研究得出的C4AF相关数据,建立C4AF晶体的EBSD晶体学数据库文件.对样品进行EBSD相鉴定测试,其主晶相为C4AF.并结合EBSD测试分析检验,该数据库文件可以很好地标定C4AF样品的背散射菊池衍射图像.根据C4AF的晶胞参数、空间群及原子坐标建立了C4AF的三维晶体结构模型.

  4. C4 Photosynthesis (The CO2-Concentrating Mechanism and Photorespiration).

    Science.gov (United States)

    Dai, Z.; Ku, MSB.; Edwards, G. E.

    1993-09-01

    Despite previous reports of no apparent photorespiration in C4 plants based on measurements of gas exchange under 2 versus 21% O2 at varying [CO2], photosynthesis in maize (Zea mays) shows a dual response to varying [O2]. The maximum rate of photosynthesis in maize is dependent on O2 (approximately 10%). This O2 dependence is not related to stomatal conductance, because measurements were made at constant intercellular CO2 concentration (Ci); it may be linked to respiration or pseudocyclic electron flow. At a given Ci, increasing [O2] above 10% inhibits both the rate of photosynthesis, measured under high light, and the maximum quantum yield, measured under limiting light ([phi]CO2). The dual effect of O2 is masked if measurements are made under only 2 versus 21% O2. The inhibition of both photosynthesis and [phi]CO2 by O2 (measured above 10% O2) with decreasing Ci increases in a very similar manner, characteristically of O2 inhibition due to photorespiration. There is a sharp increase in O2 inhibition when the Ci decreases below 50 [mu]bar of CO2. Also, increasing temperature, which favors photorespiration, causes a decrease in [phi]CO2 under limiting CO2 and 40% O2. By comparing the degree of inhibition of photosynthesis in maize with that in the C3 species wheat (Triticum aestivum) at varying Ci, the effectiveness of C4 photosynthesis in concentrating CO2 in the leaf was evaluated. Under high light, 30[deg]C, and atmospheric levels of CO2 (340 [mu]bar), where there is little inhibition of photosynthesis in maize by O2, the estimated level of CO2 around ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in the bundle sheath compartment was 900 [mu]bar, which is about 3 times higher than the value around Rubisco in mesophyll cells of wheat. A high [CO2] is maintained in the bundle sheath compartment in maize until Ci decreases below approximately 100 [mu]bar. The results from these gas exchange measurements indicate that photorespiration occurs in maize but

  5. Electronic excitation of C4F6 isomers by electron impact

    International Nuclear Information System (INIS)

    We have measured electronic excitation differential cross sections for C4F6 molecules isomers by electron impact. In the case of hexafluoro-1,3-butadiene we observed an optical forbidden transition at around 5 eV. The spectra of the three C4F6 isomers show the most intense band clearly shifted to lower energies when going from 2-C4F6, to c-C4F6 and to 1,3-C4F6.

  6. Electron interactions with c-C4F8

    International Nuclear Information System (INIS)

    The limited electron collision cross-section and transport-coefficient data for the plasma processing gas perfluorocyclobutane (c-C4F8) are synthesized, assessed, and discussed. These include cross sections for total electron scattering, differential elastic electron scattering, partial and total ionization, dissociation into neutral fragments, and electron attachment, as well as data on electron transport, ionization, and attachment coefficients. The available data on both the electron collision cross sections and the electron transport coefficients require confirmation. Also, measurements are needed of the momentum transfer and elastic integral cross sections, and of the cross sections for other significant low-energy electron collision processes such as vibrational and electronic excitation. In addition, electron transport data over a wider range of values of the density-reduced electric field are needed. The present assessment of data on electron affinity, attachment, and scattering suggests the existence of negative ion states near -0.6, 4.9, 6.9, 9.0, and 10.5 eV

  7. Active C4 Electrodes for Local Field Potential Recording Applications

    Directory of Open Access Journals (Sweden)

    Lu Wang

    2016-02-01

    Full Text Available Extracellular neural recording, with multi-electrode arrays (MEAs, is a powerful method used to study neural function at the network level. However, in a high density array, it can be costly and time consuming to integrate the active circuit with the expensive electrodes. In this paper, we present a 4 mm × 4 mm neural recording integrated circuit (IC chip, utilizing IBM C4 bumps as recording electrodes, which enable a seamless active chip and electrode integration. The IC chip was designed and fabricated in a 0.13 μm BiCMOS process for both in vitro and in vivo applications. It has an input-referred noise of 4.6 μV rms for the bandwidth of 10 Hz to 10 kHz and a power dissipation of 11.25 mW at 2.5 V, or 43.9 μW per input channel. This prototype is scalable for implementing larger number and higher density electrode arrays. To validate the functionality of the chip, electrical testing results and acute in vivo recordings from a rat barrel cortex are presented.

  8. Active C4 Electrodes for Local Field Potential Recording Applications

    Science.gov (United States)

    Wang, Lu; Freedman, David; Sahin, Mesut; Ünlü, M. Selim; Knepper, Ronald

    2016-01-01

    Extracellular neural recording, with multi-electrode arrays (MEAs), is a powerful method used to study neural function at the network level. However, in a high density array, it can be costly and time consuming to integrate the active circuit with the expensive electrodes. In this paper, we present a 4 mm × 4 mm neural recording integrated circuit (IC) chip, utilizing IBM C4 bumps as recording electrodes, which enable a seamless active chip and electrode integration. The IC chip was designed and fabricated in a 0.13 μm BiCMOS process for both in vitro and in vivo applications. It has an input-referred noise of 4.6 μVrms for the bandwidth of 10 Hz to 10 kHz and a power dissipation of 11.25 mW at 2.5 V, or 43.9 μW per input channel. This prototype is scalable for implementing larger number and higher density electrode arrays. To validate the functionality of the chip, electrical testing results and acute in vivo recordings from a rat barrel cortex are presented. PMID:26861324

  9. Control of photosynthesis by the carbohydrate level in leaves of the C4 plant Amaranthus edulis L.

    Science.gov (United States)

    Blechschmidt-Schneider, S; Ferrar, P; Osmond, C B

    1989-04-01

    Photosynthesis was studied in relation to the carbohydrate status in intact leaves of the C4 plant Amaranthus edulis. The rate of leaf net CO2 assimilation, stomatal conductance and intercellular partial pressure of CO2 remained constant or showed little decline towards the end of an 8-h period of illumination in ambient air (340 μbar CO2, 21% O2). When sucrose export from the leaf was inhibited by applying a 4-h cold-block treatment (1°C) to the petiole, the rate of photosynthesis rapidly decreased with time. After the removal of the cold block from the petiole, further reduction in photosynthetic rate occurred, and there was no recovery in the subsequent light period. Although stomatal conductance declined with time, intercellular CO2 partial pressure remained relatively constant, indicating that the inhibition of photosynthesis was not primarily caused by changes in stomatal aperture. Analysis of the leaf carbohydrate status showed a five- to sixfold increase in the soluble sugar fraction (mainly sucrose) in comparison with the untreated controls, whereas the starch content was the same. Leaf osmotic potential increased significantly with the accumulation of soluble sugars upon petiole chilling, and leaf water potential became slightly more negative. After 14 h recovery in the dark, photosynthesis returned to its initial maximum value within 1 h of illumination, and this was associated with a decline in leaf carbohydrate levels overnight. These data show that, in Amaranthus edulis, depression in photosynthesis when translocation is impaired is closely related to the accumulation of soluble sugars (sucrose) in source leaves, indicating feedback control of C4 photosynthesis. Possible mechanisms by which sucrose accumulation in the leaf may affect the rate of photosynthesis are discussed with regard to the leaf anatomy of C4 plants. PMID:24212494

  10. Structural and Metabolic Transitions of C4 Leaf Development and Differentiation Defined by Microscopy and Quantitative Proteomics in Maize[W

    Science.gov (United States)

    Majeran, Wojciech; Friso, Giulia; Ponnala, Lalit; Connolly, Brian; Huang, Mingshu; Reidel, Edwin; Zhang, Cankui; Asakura, Yukari; Bhuiyan, Nazmul H.; Sun, Qi; Turgeon, Robert; van Wijk, Klaas J.

    2010-01-01

    C4 grasses, such as maize (Zea mays), have high photosynthetic efficiency through combined biochemical and structural adaptations. C4 photosynthesis is established along the developmental axis of the leaf blade, leading from an undifferentiated leaf base just above the ligule into highly specialized mesophyll cells (MCs) and bundle sheath cells (BSCs) at the tip. To resolve the kinetics of maize leaf development and C4 differentiation and to obtain a systems-level understanding of maize leaf formation, the accumulation profiles of proteomes of the leaf and the isolated BSCs with their vascular bundle along the developmental gradient were determined using large-scale mass spectrometry. This was complemented by extensive qualitative and quantitative microscopy analysis of structural features (e.g., Kranz anatomy, plasmodesmata, cell wall, and organelles). More than 4300 proteins were identified and functionally annotated. Developmental protein accumulation profiles and hierarchical cluster analysis then determined the kinetics of organelle biogenesis, formation of cellular structures, metabolism, and coexpression patterns. Two main expression clusters were observed, each divided in subclusters, suggesting that a limited number of developmental regulatory networks organize concerted protein accumulation along the leaf gradient. The coexpression with BSC and MC markers provided strong candidates for further analysis of C4 specialization, in particular transporters and biogenesis factors. Based on the integrated information, we describe five developmental transitions that provide a conceptual and practical template for further analysis. An online protein expression viewer is provided through the Plant Proteome Database. PMID:21081695

  11. Increased expression of a novel splice variant of the complement component 4 (C4A) gene in mastitis-infected dairy cattle.

    Science.gov (United States)

    Yang, Y; Huang, J M; Ju, Z H; Li, Q L; Zhou, L; Li, R L; Li, J B; Shi, F X; Zhong, J F; Wang, C F

    2012-08-29

    The complement system helps in the direct lysis of invading pathogens and modulates phagocytic, humoral and cellular immune responses. Complement 4 is a critical component in complement activity and protection against many bacterial pathogens because it is essential to classical and lectin activation pathways. We used reverse transcription and PCR to investigate alternative splicing and expression of the complement component 4 (C4A) gene in Chinese Holstein cattle. The PCR products were cloned and sequenced. A novel splice variant involving intron 10 was identified, which we named C4A-AS. To examine how C4A gene activity is affected by bovine mastitis, six Chinese Holstein cattle were divided into healthy (non-mastitic) and Staphylococcus aureus-induced mastitic groups. Real-time quantitative PCR (qRT-PCR) revealed that the C4A-complete and C4A-AS transcripts are expressed at significantly different levels in healthy cows, while there were no significant differences in the mastitic group (P = 0.257). Expression of C4A-AS increased significantly when mastitis developed. We also examined the expression of C4A-complete and C4A-AS in several tissues (liver, heart, spleen, lung, kidney, tongue, and muscle). The two transcripts were expressed in all of these tissues but there were no significant differences in expression between healthy and mastitic cows. We therefore conclude that the C4A-complete transcript is the main transcript under normal physiological conditions, while C4A-AS is augmented when mastitis develops.

  12. Photosynthetic light reactions at the gold interface

    NARCIS (Netherlands)

    Kamran, Muhammad

    2014-01-01

    In the project described in this thesis we studied a simple bio-electronic device for solar energy conversion by surface-assembly of photosynthetic pigment-protein complexes on a bare gold-electrode. Optical excitation of the photosynthetic pigments gives rise to charge separation in the so-called r

  13. High C3 photosynthetic capacity and high intrinsic water use efficiency underlies the high productivity of the bioenergy grass Arundo donax.

    Science.gov (United States)

    Webster, Richard J; Driever, Steven M; Kromdijk, Johannes; McGrath, Justin; Leakey, Andrew D B; Siebke, Katharina; Demetriades-Shah, Tanvir; Bonnage, Steve; Peloe, Tony; Lawson, Tracy; Long, Stephen P

    2016-02-10

    Arundo donax has attracted interest as a potential bioenergy crop due to a high apparent productivity. It uses C3 photosynthesis yet appears competitive with C4 grass biomass feedstock's and grows in warm conditions where C4 species might be expected to be that productive. Despite this there has been no systematic study of leaf photosynthetic properties. This study determines photosynthetic and photorespiratory parameters for leaves in a natural stand of A. donax growing in southern Portugal. We hypothesise that A. donax has a high photosynthetic potential in high and low light, stomatal limitation to be small and intrinsic water use efficiency unusually low. High photosynthetic rates in A. donax resulted from a high capacity for both maximum Rubisco (Vc,max 117 μmol CO2 m(-2) s(-1)) and ribulose-1:5-bisphosphate limited carboxylation rate (Jmax 213 μmol CO2 m(-2) s(-1)) under light-saturated conditions. Maximum quantum yield for light-limited CO2 assimilation was also high relative to other C3 species. Photorespiratory losses were similar to other C3 species under the conditions of measurement (25%), while stomatal limitation was high (0.25) resulting in a high intrinsic water use efficiency. Overall the photosynthetic capacity of A. donax is high compared to other C3 species, and comparable to C4 bioenergy grasses.

  14. SysML对C4ISR系统建模的支持研究%Supporting Study on Modeling C4ISR Systems Based on SysML

    Institute of Scientific and Technical Information of China (English)

    张炜钟; 王智学; 朱卫星; 陈剑

    2011-01-01

    To solve the problems of accuracy and integrality of semantic specification for C4ISR modeling, a modeling method of analysis and design of C4 ISR based on the system modeling language (SysML) is proposed.Considering the mechanism of SysML, the supporting effect of the new requirement diagrams, parameter diagrams, extended block diagrams and activity diagrams of SysML in modeling C4ISR is researched.The superiority of rigor description and quantitative analysis of SysML for C4ISR modeling is discussed.With an example of aerial defence system, the modeling process based on SysML is researched.The results show that this method is feasible and effective for precise semantic modeling of C4ISR.%为解决C4ISR建模中的语义表达精确性和完整性问题,提出了基于系统建模语言(SysML)的C4ISR分析与设计建模方法.通过分析SysML的机制,研究了SysML新增的需求图、参数图和扩展的块图、活动图等模型对C4ISR建模的支持作用,探讨了其对C4ISR建模的精确描述和定量分析优势.以某区域防空系统为例,研究了基于SysML的系统建模分析过程,结果表明该文方法对于C4ISR的精确语义建模合理可行.

  15. Copper Causes Regiospecific Formation of C4F8-Containing Six-Membered Rings and their Defluorination/Aromatization to C4F4-Containing Rings in Triphenylene/1,4-C4F8I2 Reactions

    Energy Technology Data Exchange (ETDEWEB)

    Rippy, Kerry C.; Bukovsky, Eric V.; Clikeman, Tyler T.; Chen, Yu-Sheng; Hou, Gao-Lei; Wang, Xue B.; Popov, Alexey; Boltalina, Olga V.; Strauss, Steven H.

    2016-01-18

    The presence of Cu in reactions of triphenylene (TRPH) and 1,4-C4F8I2 at 360 °C led to regiospecific substitution of TRPH ortho C(β) atoms to form C4F8-containing rings, completely suppressing substitution on C(α) atoms. In addition, Cu caused selective reductive-defluorination/aromatization (RD/A) to form C4F4- containing aromatic rings. Without Cu, the reactions of TRPH and 1,4- C4F8I2 were not regiospecific and no RD/A was observed. These results, supported by DFT calculations, are the first examples of Cupromoted (i) regiospecific perfluoroannulation, (ii) preparative C–F activation, and (iii) RD/A. HPLC-purified products were characterized by X-ray diffraction, low-temperature PES, and 1H/19F NMR.

  16. Effects of water stress on the photosynthetic assimilation and distribution of 14C-photosynthate in maize (Zea mays L.) and bean (Phaseolus vulgaris L.)

    International Nuclear Information System (INIS)

    The relationship between photosynthesis and distribution of 14C-photosinthate as affected by water stress was evaluated. Corn (Zea mays L.) during the grain filling period and bean (Phaseolus vulgaris L.) during flowering, representing a C-4 and a C-3 photosynthetic type, respectively, were studied. (M.A.C.)

  17. Photosynthetic system as a biological functional element

    International Nuclear Information System (INIS)

    Photosynthetic apparatus of high plants and photosynthetic bacteria is essentially autonomic system in terms of genetics and structural -functional properties located in specific medium, a bio-membrane. Processes of light absorption and exciton migration in light harvesting antenna, separation and further transfer of charges in reaction centers have specific features, which may be used for application of these objects as key elements in construction of future biological functional elements. Progress in study and genetic modification of photosynthetic membranes achieved during the last decade opens great prospects in development biological functional elements and systems. The main characteristics of photosynthetic system for these purposes are: (i) energy conversion processes in the first light phase of the photosynthesis have very short periods, up to picoseconds, which indicates possibility of creation of ultrafast functional elements on their basis; (ii) characteristics sizes of photosynthetic units, 10-100 nm, and possibility to arrange regularly disposed elements in relevant membranes could be prospective point for creation of nano structures and on their basis relevant biologic functional elements; (iii) elements based on modified photosynthetic apparatus and bio-membranes might be efficiently created by methods of gene engineering and manipulation, that open huge opportunities for development of read biological functional systems. In the paper structural-functional properties and characteristics of high plants and purple photosynthetic bacteria, which may be useful for creation of future biological functional elements are considered. (author)

  18. Africa's wild C4 plant foods and possible early hominid diets.

    Science.gov (United States)

    Peters, Charles R; Vogel, John C

    2005-03-01

    A small minority of Africa's wild plant foods are C4. These are primarily the seeds of some of the C4 grasses, the rootstocks and stem/leaf bases of some of the C4 sedges (especially papyrus), and the leaves of some of the C4 herbaceous dicots (forbs). These wild food plants are commonly found in disturbed ground and wetlands (particularly the grasses and sedges). Multiple lines of evidence indicate that C4 grasses were present in Africa by at least the late Miocene. It is a reasonable hypothesis that the prehistory of the C4 sedges parallels that of the C4 grasses, but the C4 forbs may not have become common until the late Pleistocene. CAM plants may have a more ancient history, but offer few opportunities for an additional C4-like dietary signal. The environmental reconstructions available for the early South African hominid sites do not indicate the presence of large wetlands, and therefore probably the absence of a strong potential for a C4 plant food diet. However, carbon isotope analyses of tooth enamel from three species of early South African hominids have shown that there was a significant but not dominant contribution of C4 biomass in their diets. Since it appears unlikely that this C4 component could have come predominantly from C4 plant foods, a broad range of potential animal contributors is briefly considered, namely invertebrates, reptiles, birds, and small mammals. It is concluded that the similar average C4 dietary intake seen in the three South African hominid species could have been acquired by differing contributions from the various sources, without the need to assume scavenging or hunting of medium to large grazing ungulates. Effectively similar dominantly dryland paleo-environments may also be part of the explanation. Theoretically, elsewhere in southern and eastern Africa, large wetlands would have offered early hominids greater opportunities for a C4 plant diet. PMID:15737391

  19. Africa's wild C4 plant foods and possible early hominid diets.

    Science.gov (United States)

    Peters, Charles R; Vogel, John C

    2005-03-01

    A small minority of Africa's wild plant foods are C4. These are primarily the seeds of some of the C4 grasses, the rootstocks and stem/leaf bases of some of the C4 sedges (especially papyrus), and the leaves of some of the C4 herbaceous dicots (forbs). These wild food plants are commonly found in disturbed ground and wetlands (particularly the grasses and sedges). Multiple lines of evidence indicate that C4 grasses were present in Africa by at least the late Miocene. It is a reasonable hypothesis that the prehistory of the C4 sedges parallels that of the C4 grasses, but the C4 forbs may not have become common until the late Pleistocene. CAM plants may have a more ancient history, but offer few opportunities for an additional C4-like dietary signal. The environmental reconstructions available for the early South African hominid sites do not indicate the presence of large wetlands, and therefore probably the absence of a strong potential for a C4 plant food diet. However, carbon isotope analyses of tooth enamel from three species of early South African hominids have shown that there was a significant but not dominant contribution of C4 biomass in their diets. Since it appears unlikely that this C4 component could have come predominantly from C4 plant foods, a broad range of potential animal contributors is briefly considered, namely invertebrates, reptiles, birds, and small mammals. It is concluded that the similar average C4 dietary intake seen in the three South African hominid species could have been acquired by differing contributions from the various sources, without the need to assume scavenging or hunting of medium to large grazing ungulates. Effectively similar dominantly dryland paleo-environments may also be part of the explanation. Theoretically, elsewhere in southern and eastern Africa, large wetlands would have offered early hominids greater opportunities for a C4 plant diet.

  20. An assessment of the capacity for phosphoenolpyruvate carboxykinase to contribute to C4 photosynthesis.

    Science.gov (United States)

    Koteyeva, Nuria K; Voznesenskaya, Elena V; Edwards, Gerald E

    2015-06-01

    Three C4 acid decarboxylases, phosphoenolpyruvate carboxykinase (PEPCK), NADP-malic enzyme (NADP-ME), and NAD-malic enzyme (NAD-ME) were recruited from C3 plants to support C4 photosynthesis. In Poaceae, there are established lineages having PEPCK type species, and some NADP-ME lineages in which PEPCK contributes to C4. Besides family Poaceae, recently PEPCK has been reported to function in C4 photosynthesis in eudicot species including Cleome gynandra (Cleomaceae), Trianthema portulacastrum and Zaleya pentandra (Aizoaceae). We evaluated PEPCK by enzyme assay and western blots in representatives of Poaceae, Aizoaceae, Cleomaceae, and Chenopodiaceae compared to that in the PEPCK type C4 grass Spartina anglica. Eragrostis nutans was identified as the first NAD-ME type C4 grass having substantial amounts of PEPCK. In the eudicots, including C. gynandra, Cleome angustifolia, T. portulacastrum, Z. pentandra, and nine C4 members of family Chenopodiaceae (which has the most C4 species and diversity in forms among eudicot families), amounts of PEPCK were generally very low (barely detectable up to 4% of that in S. anglica). Based on these results, C4 species can be classified biochemically according to the dominant decarboxylase recruited for C4 function; and, Poaceae remains the only family in which PEPCK is known to have a significant role in C4 photosynthesis.

  1. 萃取精馏分离C4的过程设计%Process Design for Separating C4 Mixtures by Extractive Distillation

    Institute of Scientific and Technical Information of China (English)

    雷志刚; 陈标华; 李建伟

    2003-01-01

    C4 components are useful in industry and should be separated as individuals. A new process wasproposed to separate them by extractive distillation, with the advantages of low equipment investment, energyconsumption and liquid load in the columns. One principle to improve the extractive distillation process was putforward. Moreover, the analysis of operation state of the new process was done. There were eight operation statesfound for the whole process, but only one operation state was desirable. This work provides a way to effectivelyseparate C4 mixtures and helps the reasonable utilization of C4 resource.

  2. The acclimation of photosynthesis and respiration to temperature in the C3 -C4 intermediate Salsola divaricata: induction of high respiratory CO2 release under low temperature.

    Science.gov (United States)

    Gandin, Anthony; Koteyeva, Nuria K; Voznesenskaya, Elena V; Edwards, Gerald E; Cousins, Asaph B

    2014-11-01

    Photosynthesis in C(3) -C(4) intermediates reduces carbon loss by photorespiration through refixing photorespired CO(2) within bundle sheath cells. This is beneficial under warm temperatures where rates of photorespiration are high; however, it is unknown how photosynthesis in C(3) -C(4) plants acclimates to growth under cold conditions. Therefore, the cold tolerance of the C(3) -C(4) Salsola divaricata was tested to determine whether it reverts to C(3) photosynthesis when grown under low temperatures. Plants were grown under cold (15/10 °C), moderate (25/18 °C) or hot (35/25 °C) day/night temperatures and analysed to determine how photosynthesis, respiration and C(3) -C(4) features acclimate to these growth conditions. The CO(2) compensation point and net rates of CO(2) assimilation in cold-grown plants changed dramatically when measured in response to temperature. However, this was not due to the loss of C(3) -C(4) intermediacy, but rather to a large increase in mitochondrial respiration supported primarily by the non-phosphorylating alternative oxidative pathway (AOP) and, to a lesser degree, the cytochrome oxidative pathway (COP). The increase in respiration and AOP capacity in cold-grown plants likely protects against reactive oxygen species (ROS) in mitochondria and photodamage in chloroplasts by consuming excess reductant via the alternative mitochondrial respiratory electron transport chain.

  3. Hybrid system of semiconductor and photosynthetic protein.

    Science.gov (United States)

    Kim, Younghye; Shin, Seon Ae; Lee, Jaehun; Yang, Ki Dong; Nam, Ki Tae

    2014-08-29

    Photosynthetic protein has the potential to be a new attractive material for solar energy absorption and conversion. The development of semiconductor/photosynthetic protein hybrids is an example of recent progress toward efficient, clean and nanostructured photoelectric systems. In the review, two biohybrid systems interacting through different communicating methods are addressed: (1) a photosynthetic protein immobilized semiconductor electrode operating via electron transfer and (2) a hybrid of semiconductor quantum dots and photosynthetic protein operating via energy transfer. The proper selection of materials and functional and structural modification of the components and optimal conjugation between them are the main issues discussed in the review. In conclusion, we propose the direction of future biohybrid systems for solar energy conversion systems, optical biosensors and photoelectric devices.

  4. Anatomía del tejido fotosintético de diez taxa de Opuntia establecidos en el secano árido mediterráneo de Chile Anatomy of the photosynthetic tissue in ten taxa of Opuntia established to the mediterranean arid zone of Chile

    Directory of Open Access Journals (Sweden)

    SILVA HERMAN

    2001-06-01

    Full Text Available Se evaluó el efecto de la exposición de cladodios a la radiación en la anatomía del tejido fotosintético de 10 taxa de Opuntia, (plantas con metabolismo ácido crasuláceo, CAM establecidos en al secano árido de la IV Región de Chile. A nivel del tejido epidérmico se evaluó el grosor de la cutícula, la densidad de estomas y las dimensiones de células oclusivas. En el tejido fotosintetico, se evaluo las dimensiones celulares con el objeto de estimar la superficie de paredes celulares expuestas al intercambio gaseoso por unidad de tejido fotosintético, relación conocida como Ames/A. Los resultados señalan grandes dimensiones celulares y baja densidad estomática, lo que determina un número reducido de estomas por unidad de superficie en relación a especies de otras vías metabólicas (C3 y C4. La comparación entre taxones, muestra diferencias significativas en la relación de áreas Ames/A, parámetro estrechamente relacionado a la capacidad fotosintética. Estas características anatómicas y sus modificaciones en combinación con el metabolismo CAM, contribuyen a su adaptación a condiciones de pluviometría limitadaThe anatomy of the photosynthetic tissue and the effect of cladode exposure to radiation was studied in ten taxa of Opuntia, plants with crassulacean acid metabolism (CAM, established in the dry lands of the IV Region of Chile. At the epidermic level the cuticle thickness, stomatal frequency, and dimension of guard cells were evaluated. In the photosynthetic tissue, cell dimensions were determined in order to estimate the area of cell walls exposed to gaseous exchange per unit of photosynthetic tissue (A mes/ A. The results indicate large cell dimensions and low stomata frequency which results in a reduced number of stomata per unit area in relation to species with other metabolic pathways (C3 and C4, The comparison between taxa shows significant differences in the relation of Ames/A areas, a parameter closely

  5. Acceleration of C1~C4 and AFM Observation of the Tracks of C1~C4 in CR-39

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Utilizing the 200 type intensive current cesium sputter ion source of HI-13 tandem and changing themagnetic field of the injector magnet, carbon cluster negative ions C1-~C4- were extracted for graphitepellet. Current intensities of C1-~C4- were 8.0, 7.6, 0.9 and 1.3μA, respectively. The change of charge

  6. Analysis of C4 Oligmer and Its Hydrogenated Product%C4齐聚物及其加氢产物的分析

    Institute of Scientific and Technical Information of China (English)

    薛慧峰; 笪敏峰; 赵家林

    2004-01-01

    The components in C4 oligmer and its hydrogenated product were separated on capillary columns. The methods including retention time, chemical reaction, gas chromatography-mass spectrometry and gas chromatography-infrared spectrmetry were used to identify the components. The content of component was calculated by area normalization.The comparative analysis of C8 hydrocarbons in C4 oligmer and its hydrogenated product shows that the results are obviously different due to different conditions of hydrogenation.

  7. Testing the Activity of Complement Convertases in Serum/Plasma for Diagnosis of C4NeF-Mediated C3 Glomerulonephritis.

    Science.gov (United States)

    Blom, Anna M; Corvillo, Fernando; Magda, Michal; Stasiłojć, Grzegorz; Nozal, Pilar; Pérez-Valdivia, Miguel Ángel; Cabello-Chaves, Virginia; Rodríguez de Córdoba, Santiago; López-Trascasa, Margarita; Okrój, Marcin

    2016-07-01

    Autoantibodies termed C3-nephritic factor (C3NeF), which stabilize convertases of the alternative complement pathway, often stimulate autoinflammatory diseases. However, knowledge about analogous autoantibodies acting on the classical pathway (C4NeF) is limited to a few reports, which indicate association with kidney dysfunction, systemic lupus erythematous, and infections. C4NeF may appear independently from C3NeF, but the lack of a routine diagnostic method predisposes C4NeF for being an underestimated player in autoinflammatory episodes. We tested the activity of classical convertases directly in serum/plasma to screen samples from 13 patients with C3 glomerulopathies and identified one patient showing significantly prolonged half-life of these enzymes. Observed effect was reproduced by immunoglobulins purified from patient's plasma and additionally confirmed on classical convertase built from purified components. Isolated immunoglobulins protected classical convertases from both spontaneous and inhibitor-driven decay but not from C4b proteolysis. The patient had a decreased serum level of C3, elevated sC5b-9, and normal concentrations of factor B and C4. Neither C3NeF nor other autoantibodies directed against alternative pathway proteins (factor H, factor B, factor I, C3, and properdin) were found. Genetic analysis showed no mutations in C3, CFB, CFH, CFI, MCP, THBD, and DGKE genes. Renal biopsy revealed a membranoproliferative pattern with intense C3 deposits. Our results underline the importance of C4NeF as an independent pathogenic factor and a need for the implementation of routine examination of classical convertase activity. Proposed method may enable robust inspection of such atypical cases. PMID:27146825

  8. Photosynthetic carbon monoxide metabolism by sugarcane leaves

    Energy Technology Data Exchange (ETDEWEB)

    Kortschak, H.P.; Nickell, L.G.

    1973-01-01

    The photosynthetic carbon monoxide metabolism by sugarcane was studied to determine whether substantial quantities of CO are removed from the air by fields in Hawaii. Leaves metabolized low CO concentrations photosynthetically, with sucrose as an end product. Rates of uptake were of the order of 10/sup -4/ power mg/d sq m/hr. This was to low to be significant in removing CO from the atmosphere.

  9. Metabolic Reconstruction of Setaria italica: A Systems Biology Approach for Integrating Tissue-Specific Omics and Pathway Analysis of Bioenergy Grasses.

    Science.gov (United States)

    de Oliveira Dal'Molin, Cristiana G; Orellana, Camila; Gebbie, Leigh; Steen, Jennifer; Hodson, Mark P; Chrysanthopoulos, Panagiotis; Plan, Manuel R; McQualter, Richard; Palfreyman, Robin W; Nielsen, Lars K

    2016-01-01

    The urgent need for major gains in industrial crops productivity and in biofuel production from bioenergy grasses have reinforced attention on understanding C4 photosynthesis. Systems biology studies of C4 model plants may reveal important features of C4 metabolism. Here we chose foxtail millet (Setaria italica), as a C4 model plant and developed protocols to perform systems biology studies. As part of the systems approach, we have developed and used a genome-scale metabolic reconstruction in combination with the use of multi-omics technologies to gain more insights into the metabolism of S. italica. mRNA, protein, and metabolite abundances, were measured in mature and immature stem/leaf phytomers, and the multi-omics data were integrated into the metabolic reconstruction framework to capture key metabolic features in different developmental stages of the plant. RNA-Seq reads were mapped to the S. italica resulting for 83% coverage of the protein coding genes of S. italica. Besides revealing similarities and differences in central metabolism of mature and immature tissues, transcriptome analysis indicates significant gene expression of two malic enzyme isoforms (NADP- ME and NAD-ME). Although much greater expression levels of NADP-ME genes are observed and confirmed by the correspondent protein abundances in the samples, the expression of multiple genes combined to the significant abundance of metabolites that participates in C4 metabolism of NAD-ME and NADP-ME subtypes suggest that S. italica may use mixed decarboxylation modes of C4 photosynthetic pathways under different plant developmental stages. The overall analysis also indicates different levels of regulation in mature and immature tissues in carbon fixation, glycolysis, TCA cycle, amino acids, fatty acids, lignin, and cellulose syntheses. Altogether, the multi-omics analysis reveals different biological entities and their interrelation and regulation over plant development. With this study, we demonstrated

  10. Metabolic Reconstruction of Setaria italica: A Systems Biology Approach for Integrating Tissue-Specific Omics and Pathway Analysis of Bioenergy Grasses.

    Science.gov (United States)

    de Oliveira Dal'Molin, Cristiana G; Orellana, Camila; Gebbie, Leigh; Steen, Jennifer; Hodson, Mark P; Chrysanthopoulos, Panagiotis; Plan, Manuel R; McQualter, Richard; Palfreyman, Robin W; Nielsen, Lars K

    2016-01-01

    The urgent need for major gains in industrial crops productivity and in biofuel production from bioenergy grasses have reinforced attention on understanding C4 photosynthesis. Systems biology studies of C4 model plants may reveal important features of C4 metabolism. Here we chose foxtail millet (Setaria italica), as a C4 model plant and developed protocols to perform systems biology studies. As part of the systems approach, we have developed and used a genome-scale metabolic reconstruction in combination with the use of multi-omics technologies to gain more insights into the metabolism of S. italica. mRNA, protein, and metabolite abundances, were measured in mature and immature stem/leaf phytomers, and the multi-omics data were integrated into the metabolic reconstruction framework to capture key metabolic features in different developmental stages of the plant. RNA-Seq reads were mapped to the S. italica resulting for 83% coverage of the protein coding genes of S. italica. Besides revealing similarities and differences in central metabolism of mature and immature tissues, transcriptome analysis indicates significant gene expression of two malic enzyme isoforms (NADP- ME and NAD-ME). Although much greater expression levels of NADP-ME genes are observed and confirmed by the correspondent protein abundances in the samples, the expression of multiple genes combined to the significant abundance of metabolites that participates in C4 metabolism of NAD-ME and NADP-ME subtypes suggest that S. italica may use mixed decarboxylation modes of C4 photosynthetic pathways under different plant developmental stages. The overall analysis also indicates different levels of regulation in mature and immature tissues in carbon fixation, glycolysis, TCA cycle, amino acids, fatty acids, lignin, and cellulose syntheses. Altogether, the multi-omics analysis reveals different biological entities and their interrelation and regulation over plant development. With this study, we demonstrated

  11. Metabolic Reconstruction of Setaria italica: A Systems Biology Approach for Integrating Tissue-Specific Omics and Pathway Analysis of Bioenergy Grasses

    Science.gov (United States)

    de Oliveira Dal'Molin, Cristiana G.; Orellana, Camila; Gebbie, Leigh; Steen, Jennifer; Hodson, Mark P.; Chrysanthopoulos, Panagiotis; Plan, Manuel R.; McQualter, Richard; Palfreyman, Robin W.; Nielsen, Lars K.

    2016-01-01

    The urgent need for major gains in industrial crops productivity and in biofuel production from bioenergy grasses have reinforced attention on understanding C4 photosynthesis. Systems biology studies of C4 model plants may reveal important features of C4 metabolism. Here we chose foxtail millet (Setaria italica), as a C4 model plant and developed protocols to perform systems biology studies. As part of the systems approach, we have developed and used a genome-scale metabolic reconstruction in combination with the use of multi-omics technologies to gain more insights into the metabolism of S. italica. mRNA, protein, and metabolite abundances, were measured in mature and immature stem/leaf phytomers, and the multi-omics data were integrated into the metabolic reconstruction framework to capture key metabolic features in different developmental stages of the plant. RNA-Seq reads were mapped to the S. italica resulting for 83% coverage of the protein coding genes of S. italica. Besides revealing similarities and differences in central metabolism of mature and immature tissues, transcriptome analysis indicates significant gene expression of two malic enzyme isoforms (NADP- ME and NAD-ME). Although much greater expression levels of NADP-ME genes are observed and confirmed by the correspondent protein abundances in the samples, the expression of multiple genes combined to the significant abundance of metabolites that participates in C4 metabolism of NAD-ME and NADP-ME subtypes suggest that S. italica may use mixed decarboxylation modes of C4 photosynthetic pathways under different plant developmental stages. The overall analysis also indicates different levels of regulation in mature and immature tissues in carbon fixation, glycolysis, TCA cycle, amino acids, fatty acids, lignin, and cellulose syntheses. Altogether, the multi-omics analysis reveals different biological entities and their interrelation and regulation over plant development. With this study, we demonstrated

  12. Topological Analysis of Electron Density on the Halogen-bonding Interactions Between C_4H_6O,C_4H_6S and XF(X=F,Cl,Br)%C_4H_6O,C_4H_6S与XF(X=F,Cl,Br)分子间卤键的电子密度拓扑研究

    Institute of Scientific and Technical Information of China (English)

    曾艳丽; 吉丽婷; 郑世钧; 孟令鹏

    2011-01-01

    Theoretical studies on the halogen-bonding interactions of 2,5-dihydrofuran,2,5-dihydro-thiophene and XF(X=F,Cl,Br) were investigated at the MP2/aug-cc-pVDZ level.Results show that both n-type and π-type halogen-bonded complexes can be formed between C4H6O,C4H6S and XF.For C4H6O…XF(n),C4H6O…XF(π) and C4H6S…XF(π),the interaction energies,electron densities at the halogen bond critical point,and the charge transfer amount from donor to acceptor are all in sequence of B…F2B…ClFB…BrF(B=C4H6O and C4H6S).The halogen-bonding interactions of C4H6O…BrF(n),C4H6O…BrF(π),C4H6S…F2(n),C4H6S…ClF(n),C4H6S…BrF(n) and C4H6S…BrF(π) are stronger,with bond character between covalent and ionic.The other halogen-bonding interactions are weaker,with bond character "closed-shell" electrostatic interactions.%运用MP2/aug-cc-pVDZ方法对2,5-二氢呋喃,2,5-二氢噻吩与XF(X=F,Cl,Br)之间的卤键作用进行了理论研究.研究发现:C4H6O,C4H6S与XF之间不仅存在O(S)…XF n型卤键,C=C双键与XF分子亦可形成π型卤键;对于C4H6O与XF之间的n型和π型卤键以及C4H6S与XF之间的π型卤键,卤键键能ΔE、键鞍点处的电子密度ρ(rc)以及电子给体到受体之间的电子转移数Δq(XF)均按B…F2〈B…ClF〈B…BrF(B=C4H6O,C4H6S)的顺序依次增大;对于卤键键能较大的体系C4H6O…BrF(n),C4H6O…BrF(π),C4H6S…F2(n),C4H6S…ClF(n),C4H6S…BrF(n),C4H6S…BrF(π),卤键作用介于离子键和共价键之间;而对于其它的卤键键能较小的体系,卤键作用为闭壳层静电作用.

  13. Ear of durum wheat under water stress: water relations and photosynthetic metabolism.

    Science.gov (United States)

    Tambussi, Eduardo A; Nogués, Salvador; Araus, José Luis

    2005-06-01

    The photosynthetic characteristics of the ear and flag leaf of well-watered (WW) and water-stressed (WS) durum wheat (Triticum turgidum L. var. durum) were studied in plants grown under greenhouse and Mediterranean field conditions. Gas exchange measurements simultaneously with modulated chlorophyll fluorescence were used to study the response of the ear and flag leaf to CO2 and O2 during photosynthesis. C4 metabolism was identified by assessing the sensitivity of photosynthetic rate and electron transport to oxygen. The presence of CAM metabolism was assessed by measuring daily patterns of stomatal conductance and net CO2 assimilation. In addition, the histological distribution of Rubisco protein in the ear parts was studied by immunocytochemical localisation. Relative water content (RWC) and osmotic adjustment (osmotic potential at full turgor) were also measured in these organs. Oxygen sensitivity of the assimilation rate and electron transport, the lack of Rubisco compartmentalisation in the mesophyll tissues and the gas-exchange pattern at night indicated that neither C4 nor CAM metabolism occurs in the ear of WW or WS plants. Nevertheless, photosynthetic activity of the flag leaf was more affected by WS conditions than that of the ear, under both growing conditions. The lower sensitivity under water stress of the ear than of the flag leaf was linked to higher RWC and osmotic adjustment in the ear bracts and awns. We demonstrate that the better performance of the ear under water stress (compared to the flag leaf) is not related to C4 or CAM photosynthesis. Rather, drought tolerance of the ear is explained by its higher RWC in drought. Osmotic adjustment and xeromorphic traits of ear parts may be responsible. PMID:15645303

  14. FJU-C4, a new 2-pyridone compound, attenuates lipopolysaccharide-induced systemic inflammation via p38MAPK and NF-κB in mice.

    Directory of Open Access Journals (Sweden)

    Jung-Sen Liu

    Full Text Available Despite advances in antibiotic therapy and intensive care, the mortality caused by systemic inflammatory response syndrome and severe sepsis remains high. The use of anti-inflammatory agents to attenuate inflammatory response during acute systemic inflammatory reactions may improve survival rates. Here we show that a newly synthesized 2-pyridone compound (FJU-C4 can suppress the expression of late inflammatory mediators such as iNOS and COX-2 in murine macrophages. The pro-inflammatory cytokines, including TNFα, IL-1β, and IL-6, were dose-dependently suppressed by FJU-C4 both in mRNA and protein levels. In addition, the expression of TNFα was inhibited from as early as 2 hours after exposure to LPS stimulation. The production of mature pro-inflammatory cytokines was also suppressed by pretreatment with FJU-C4 in either cell culture medium or mice serum when stimulated by LPS. FJU-C4 prolongs mouse survival and prevents mouse death from LPS-induced systemic inflammation when the dose of FJU-C4 is over 5 mg/kg. The activities of ERK, JNK, and p38MAPK were induced by LPS stimulation on murine macrophage cell line, but only p38MAPK signaling was dramatically suppressed by pretreatment with the FJU-C4 compound in a dose-dependent manner. NF-κB activation also was suppressed by FJU-C4 compound. These findings suggest that the FJU-C4 compound may act as a promising therapeutic agent against inflammatory diseases by inhibiting the p38MAPK and NF-κB signaling pathway.

  15. Pressure effect on structural, elastic, and thermodynamic properties of tetragonal B4C4

    International Nuclear Information System (INIS)

    The compressibility, elastic anisotropy, and thermodynamic properties of the recently proposed tetragonal B4C4 (t-B4C4) are investigated under high temperature and high pressure by using of first-principles calculations method. The elastic constants, bulk modulus, shear modulus, Young’s modulus, Vickers hardness, Pugh’s modulus ratio, and Poisson’s ratio for t-B4C4 under various pressures are systematically explored, the obtained results indicate that t-B4C4 is a stiffer material. The elastic anisotropies of t-B4C4 are discussed in detail under pressure from 0 GPa to 100 GPa. The thermodynamic properties of t-B4C4, such as Debye temperature, heat capacity, and thermal expansion coefficient are investigated by the quasi-harmonic Debye model

  16. Pressure effect on structural, elastic, and thermodynamic properties of tetragonal B4C4

    Directory of Open Access Journals (Sweden)

    Baobing Zheng

    2015-03-01

    Full Text Available The compressibility, elastic anisotropy, and thermodynamic properties of the recently proposed tetragonal B4C4 (t-B4C4 are investigated under high temperature and high pressure by using of first-principles calculations method. The elastic constants, bulk modulus, shear modulus, Young’s modulus, Vickers hardness, Pugh’s modulus ratio, and Poisson’s ratio for t-B4C4 under various pressures are systematically explored, the obtained results indicate that t-B4C4 is a stiffer material. The elastic anisotropies of t-B4C4 are discussed in detail under pressure from 0 GPa to 100 GPa. The thermodynamic properties of t-B4C4, such as Debye temperature, heat capacity, and thermal expansion coefficient are investigated by the quasi-harmonic Debye model.

  17. Virulence of Streptococcus mutans: Restoration of Pathogenesis of a Glucosyltransferase-Defective Mutant (C4)

    OpenAIRE

    Hirasawa, Masatomo; Kiyono, Hiroshi; Shiota, Tetsuo; HULL, RICHARD A.; Curtiss, Roy; Michalek, Suzanne M.; Mcghee, Jerry R

    1980-01-01

    Previous studies have shown that a mutant (designated C4) of Streptococcus mutans 6715 wild type (WT) is defective in glucosyltransferase (GTF)-synthesized insoluble glucan and is avirulent in gnotobiotic rats. This study investigated the factors which would render this mutant virulent in gnotobiotic rats. Microbial analysis of plaque from gnotobiotic rats (45 days old) infected with a mixture of C4 and virulent S. mutans PS-14 (approximately 15,000 C4 organisms to each S. mutans PS-14) yield...

  18. Contrasting strategies to cope with drought conditions by two tropical forage C4 grasses

    OpenAIRE

    Cardoso, Juan Andrés; Pineda, Marcela; Jiménez, Juan de la Cruz; Vergara, Manuel Fernando; Rao, Idupulapati M.

    2015-01-01

    Drought severely limits forage productivity of C4 grasses across the tropics. The avoidance of water deficit by increasing the capacity for water uptake or by controlling water loss are common responses in forage C4 grasses. Napier grass (Pennisetum purpureum) and Brachiaria hybrid cv. Mulato II are tropical C4 grasses used for livestock production due to their reputed resistance to drought conditions. However, there is scant information on the mechanisms used by these grasses to overcome wat...

  19. Macro-Climatic Distribution Limits Show Both Niche Expansion and Niche Specialization among C4 Panicoids

    OpenAIRE

    Lone Aagesen; Fernando Biganzoli; Julia Bena; Godoy-Bürki, Ana C.; Renata Reinheimer; Fernando O. Zuloaga

    2016-01-01

    Grasses are ancestrally tropical understory species whose current dominance in warm open habitats is linked to the evolution of C4 photosynthesis. C4 grasses maintain high rates of photosynthesis in warm and water stressed environments, and the syndrome is considered to induce niche shifts into these habitats while adaptation to cold ones may be compromised. Global biogeographic analyses of C4 grasses have, however, concentrated on diversity patterns, while paying little attention to distribu...

  20. Photoelectrochemical cells based on photosynthetic systems: a review

    Directory of Open Access Journals (Sweden)

    Roman A. Voloshin

    2015-06-01

    Full Text Available Photosynthesis is a process which converts light energy into energy contained in the chemical bonds of organic compounds by photosynthetic pigments such as chlorophyll (Chl a, b, c, d, f or bacteriochlorophyll. It occurs in phototrophic organisms, which include higher plants and many types of photosynthetic bacteria, including cyanobacteria. In the case of the oxygenic photosynthesis, water is a donor of both electrons and protons, and solar radiation serves as inexhaustible source of energy. Efficiency of energy conversion in the primary processes of photosynthesis is close to 100%. Therefore, for many years photosynthesis has attracted the attention of researchers and designers looking for alternative energy systems as one of the most efficient and eco-friendly pathways of energy conversion. The latest advances in the design of optimal solar cells include the creation of converters based on thylakoid membranes, photosystems, and whole cells of cyanobacteria immobilized on nanostructured electrode (gold nanoparticles, carbon nanotubes, nanoparticles of ZnO and TiO2. The mode of solar energy conversion in photosynthesis has a great potential as a source of renewable energy while it is sustainable and environmentally safety as well. Application of pigments such as Chl f and Chl d (unlike Chl a and Chl b, by absorbing the far red and near infrared region of the spectrum (in the range 700-750 nm, will allow to increase the efficiency of such light transforming systems. This review article presents the last achievements in the field of energy photoconverters based on photosynthetic systems.

  1. Involvement of C4 protein of beet severe curly top virus (family Geminiviridae in virus movement.

    Directory of Open Access Journals (Sweden)

    Kunling Teng

    Full Text Available BACKGROUND: Beet severe curly top virus (BSCTV is a leafhopper transmitted geminivirus with a monopartite genome. C4 proteins encoded by geminivirus play an important role in virus/plant interaction. METHODS AND FINDINGS: To understand the function of C4 encoded by BSCTV, two BSCTV mutants were constructed by introducing termination codons in ORF C4 without affecting the amino acids encoded by overlapping ORF Rep. BSCTV mutants containing disrupted ORF C4 retained the ability to replicate in Arabidopsis protoplasts and in the agro-inoculated leaf discs of N. benthamiana, suggesting C4 is not required for virus DNA replication. However, both mutants did not accumulate viral DNA in newly emerged leaves of inoculated N. benthamiana and Arabidopsis, and the inoculated plants were asymptomatic. We also showed that C4 expression in plant could help C4 deficient BSCTV mutants to move systemically. C4 was localized in the cytosol and the nucleus in both Arabidopsis protoplasts and N. benthamiana leaves and the protein appeared to bind viral DNA and ds/ssDNA nonspecifically, displaying novel DNA binding properties. CONCLUSIONS: Our results suggest that C4 protein in BSCTV is involved in symptom production and may facilitate virus movement instead of virus replication.

  2. Identification of radiolytic products of [C4mim][PF6] underγ-irradiation

    Institute of Scientific and Technical Information of China (English)

    敖银勇; 徐敏; 彭静; 李久强; 翟茂林; 吴国忠

    2015-01-01

    The trace water-soluble radiolytic products of neat 1-butyl-3-methylimidazolium hexafluorophosphate ([C4mim][PF6]) were identified by analysing water-washed samples of γ-irradiated ionic liquids. HF and difluorophosphinic acid were confirmed as the main radiolytic products of [C4mim][PF6], and their radiation chemical yields were quantified by 19F NMR (G(F−)=0.14 µmol/J, G(HOP(O)F2)=0.053 µmol/J). Com-pared to [C4mim][NTf2], [C4mim][PF6] shows better radiation stability.

  3. Genetic enablers underlying the clustered evolutionary origins of C4 photosynthesis in angiosperms.

    Science.gov (United States)

    Christin, Pascal-Antoine; Arakaki, Mónica; Osborne, Colin P; Edwards, Erika J

    2015-04-01

    The evolutionary accessibility of novel adaptations varies among lineages, depending in part on the genetic elements present in each group. However, the factors determining the evolutionary potential of closely related genes remain largely unknown. In plants, CO2-concentrating mechanisms such as C4 and crassulacean acid metabolism (CAM) photosynthesis have evolved numerous times in distantly related groups of species, and constitute excellent systems to study constraints and enablers of evolution. It has been previously shown for multiple proteins that grasses preferentially co-opted the same gene lineage for C4 photosynthesis, when multiple copies were present. In this work, we use comparative transcriptomics to show that this bias also exists within Caryophyllales, a distantly related group with multiple C4 origins. However, the bias is not the same as in grasses and, when all angiosperms are considered jointly, the number of distinct gene lineages co-opted is not smaller than that expected by chance. These results show that most gene lineages present in the common ancestor of monocots and eudicots produced gene descendants that were recruited into C4 photosynthesis, but that C4-suitability changed during the diversification of angiosperms. When selective pressures drove C4 evolution, some copies were preferentially co-opted, probably because they already possessed C4-like expression patterns. However, the identity of these C4-suitable genes varies among clades of angiosperms, and C4 phenotypes in distant angiosperm groups thus represent genuinely independent realizations, based on different genetic precursors.

  4. C3-C4 intermediacy in grasses: organelle enrichment and distribution, glycine decarboxylase expression, and the rise of C2 photosynthesis.

    Science.gov (United States)

    Khoshravesh, Roxana; Stinson, Corey R; Stata, Matt; Busch, Florian A; Sage, Rowan F; Ludwig, Martha; Sage, Tammy L

    2016-05-01

    Photorespiratory glycine shuttling and decarboxylation in bundle sheath (BS) cells exhibited by C2 species is proposed to be the evolutionary bridge to C4 photosynthesis in eudicots. To evaluate this in grasses, we compare anatomy, cellular localization of glycine decarboxylase (GDC), and photosynthetic physiology of a suspected C2 grass, Homolepis aturensis, with these traits in known C2 grasses, Neurachne minor and Steinchisma hians, and C3 S laxum that is sister to S hians We also use publicly available genome and RNA-sequencing data to examine the evolution of GDC subunits and enhance our understanding of the evolution of BS-specific GDC expression in C2 and C4 grasses. Our results confirm the identity of H aturensis as a C2 species; GDC is confined predominantly to the organelle-enriched BS cells in H aturensis and S hians and to mestome sheath cells of N minor Phylogenetic analyses and data obtained from immunodetection of the P-subunit of GDC are consistent with the hypothesis that the BS dominant levels of GDC in C2 and C4 species are due to changes in expression of a single GLDP gene in M and BS cells. All BS mitochondria and peroxisomes and most chloroplasts in H aturensis and S hians are situated centripetally in a pattern identical to C2 eudicots. In S laxum, which has C3-like gas exchange patterns, mitochondria and peroxisomes are positioned centripetally as they are in S hians This subcellular phenotype, also present in eudicots, is posited to initiate a facilitation cascade leading to C2 and C4 photosynthesis.

  5. Toward a photosynthetic microbial platform for terpenoid engineering.

    Science.gov (United States)

    Davies, Fiona K; Jinkerson, Robert E; Posewitz, Matthew C

    2015-03-01

    Plant terpenoids are among the most diverse group of naturally-occurring organic compounds known, and several are used in contemporary consumer products. Terpene synthase enzymes catalyze complex rearrangements of carbon skeleton precursors to yield thousands of unique chemical structures that range in size from the simplest five carbon isoprene unit to the long polymers of rubber. Such chemical diversity has established plant terpenoids as valuable commodity chemicals with applications in the pharmaceutical, neutraceutical, cosmetic, and food industries. More recently, terpenoids have received attention as a renewable alternative to petroleum-derived fuels and as the building blocks of synthetic biopolymers. However, the current plant- and petrochemical-based supplies of commodity terpenoids have major limitations. Photosynthetic microorganisms provide an opportunity to generate terpenoids in a renewable manner, employing a single consolidated host organism that is able to use solar energy, H2O and CO2 as the primary inputs for terpenoid biosynthesis. Advances in synthetic biology have seen important breakthroughs in microbial terpenoid engineering, traditionally via fermentative pathways in yeast and Escherichia coli. This review draws on the knowledge obtained from heterotrophic microbial engineering to propose strategies for the development of microbial photosynthetic platforms for industrial terpenoid production. The importance of utilizing the wealth of genetic information provided by nature to unravel the regulatory mechanisms of terpenoid biosynthesis is highlighted.

  6. Low-energy electron capture by C4+ ions from atomic hydrogen

    NARCIS (Netherlands)

    Bliek, FW; Hoekstra, R; Bannister, ME; Havener, CC

    1997-01-01

    The total-electron-capture cross section for collisions of C4+ with ground-state hydrogen (deuterium) is measured in the energy range 6-1000 eV/u using the merged-beam technique. The fraction of C4+ metastable ions present in the ion beam is measured to be 5%, which results in a correction to the cr

  7. Platelet - activating factor induces leukotriene C4 synthesis by purified human eosinophils

    NARCIS (Netherlands)

    Bruijnzeel, P.L.B.; Kok, P.T.M.; Hamelink, M.L.; Kijne, A.M.; Verhagen, J.

    1987-01-01

    Platelet-activating factor, at a concentration of 10 μM, was capable of inducing leukotriene C4 synthesis by eosinophils of healthy donors, i.e. (3.1 ± 0.3) × 106 molecules leukotriene C4 /cell (n = 31, mean ± SEM, cell purity 87 ± 2%). Reversed-phase high performance liquid chromatography analysis

  8. New Introductions of Enterovirus 71 Subgenogroup C4 Strains, France, 2012

    OpenAIRE

    Schuffenecker, Isabelle; Henquell, Cécile; Mirand, Audrey; Coste-Burel, Marianne; Marque-Juillet, Stéphanie; Desbois, Delphine; Lagathu, Gisèle; Bornebusch, Laure; Bailly, Jean-Luc; Lina, Bruno

    2014-01-01

    In France during 2012, human enterovirus 71 (EV-A71) subgenogroup C4 strains were detected in 4 children hospitalized for neonatal fever or meningitis. Phylogenetic analysis showed novel and independent EV-A71 introductions, presumably from China, and suggested circulation of C4 strains throughout France. This observation emphasizes the need for monitoring EV-A71 infections in Europe.

  9. The superfamily of C3b/C4b-binding proteins

    DEFF Research Database (Denmark)

    Kristensen, Torsten; D'Eustachio, P; Ogata, R T;

    1987-01-01

    The determination of primary structures by amino acid and nucleotide sequencing for the C3b-and/or C4b-binding proteins H, C4BP, CR1, B, and C2 has revealed the presence of a common structural element. This element is approximately 60 amino acids long and is repeated in a tandem fashion, commenci...

  10. Germination shifts of C3 and C4 species under simulated global warming scenario.

    Science.gov (United States)

    Zhang, Hongxiang; Yu, Qiang; Huang, Yingxin; Zheng, Wei; Tian, Yu; Song, Yantao; Li, Guangdi; Zhou, Daowei

    2014-01-01

    Research efforts around the world have been increasingly devoted to investigating changes in C3 and C4 species' abundance or distribution with global warming, as they provide important insight into carbon fluxes and linked biogeochemical cycles. However, changes in the early life stage (e.g. germination) of C3 and C4 species in response to global warming, particularly with respect to asymmetric warming, have received less attention. We investigated germination percentage and rate of C3 and C4 species under asymmetric (+3/+6°C at day/night) and symmetric warming (+5/+5°C at day/night), simulated by alternating temperatures. A thermal time model was used to calculate germination base temperature and thermal time constant. Two additional alternating temperature regimes were used to test temperature metrics effect. The germination percentage and rate increased continuously for C4 species, but increased and then decreased with temperature for C3 species under both symmetric and asymmetric warming. Compared to asymmetric warming, symmetric warming significantly overestimated the speed of germination percentage change with temperature for C4 species. Among the temperature metrics (minimum, maximum, diurnal temperature range and average temperature), maximum temperature was most correlated with germination of C4 species. Our results indicate that global warming may favour germination of C4 species, at least for the C4 species studied in this work. The divergent effects of asymmetric and symmetric warming on plant germination also deserve more attention in future studies.

  11. Germination shifts of C3 and C4 species under simulated global warming scenario.

    Directory of Open Access Journals (Sweden)

    Hongxiang Zhang

    Full Text Available Research efforts around the world have been increasingly devoted to investigating changes in C3 and C4 species' abundance or distribution with global warming, as they provide important insight into carbon fluxes and linked biogeochemical cycles. However, changes in the early life stage (e.g. germination of C3 and C4 species in response to global warming, particularly with respect to asymmetric warming, have received less attention. We investigated germination percentage and rate of C3 and C4 species under asymmetric (+3/+6°C at day/night and symmetric warming (+5/+5°C at day/night, simulated by alternating temperatures. A thermal time model was used to calculate germination base temperature and thermal time constant. Two additional alternating temperature regimes were used to test temperature metrics effect. The germination percentage and rate increased continuously for C4 species, but increased and then decreased with temperature for C3 species under both symmetric and asymmetric warming. Compared to asymmetric warming, symmetric warming significantly overestimated the speed of germination percentage change with temperature for C4 species. Among the temperature metrics (minimum, maximum, diurnal temperature range and average temperature, maximum temperature was most correlated with germination of C4 species. Our results indicate that global warming may favour germination of C4 species, at least for the C4 species studied in this work. The divergent effects of asymmetric and symmetric warming on plant germination also deserve more attention in future studies.

  12. 26 CFR 1.381(c)(4)-1 - Method of accounting.

    Science.gov (United States)

    2010-04-01

    ... 26 Internal Revenue 4 2010-04-01 2010-04-01 false Method of accounting. 1.381(c)(4)-1 Section 1... TAX (CONTINUED) INCOME TAXES Insolvency Reorganizations § 1.381(c)(4)-1 Method of accounting. (a... section 381(a) applies, an acquiring corporation shall use the same method of accounting used by...

  13. The role of photorespiration during the evolution of C4 photosynthesis in the genus Flaveria.

    Science.gov (United States)

    Mallmann, Julia; Heckmann, David; Bräutigam, Andrea; Lercher, Martin J; Weber, Andreas P M; Westhoff, Peter; Gowik, Udo

    2014-06-16

    C4 photosynthesis represents a most remarkable case of convergent evolution of a complex trait, which includes the reprogramming of the expression patterns of thousands of genes. Anatomical, physiological, and phylogenetic and analyses as well as computational modeling indicate that the establishment of a photorespiratory carbon pump (termed C2 photosynthesis) is a prerequisite for the evolution of C4. However, a mechanistic model explaining the tight connection between the evolution of C4 and C2 photosynthesis is currently lacking. Here we address this question through comparative transcriptomic and biochemical analyses of closely related C3, C3-C4, and C4 species, combined with Flux Balance Analysis constrained through a mechanistic model of carbon fixation. We show that C2 photosynthesis creates a misbalance in nitrogen metabolism between bundle sheath and mesophyll cells. Rebalancing nitrogen metabolism requires anaplerotic reactions that resemble at least parts of a basic C4 cycle. Our findings thus show how C2 photosynthesis represents a pre-adaptation for the C4 system, where the evolution of the C2 system establishes important C4 components as a side effect.

  14. Molecular Design of Separating C4 by Extractive Distillation with ACN%ACN萃取精馏分离C4的分子设计

    Institute of Scientific and Technical Information of China (English)

    雷志刚; 王洪有; 段占庭; 周荣琪

    2000-01-01

    ACN萃取精馏分离C4的助溶剂进行分子设计,以代替原有的水.将设计分子分为有机物和盐类分别进行,设计结果经过比较后认为ACN加盐能够有效地提高C4的相对挥发度,在此基础上与实验值对照吻合一致.萃取精馏的分子设计能够减少实验工作量.

  15. THE C2 OXIDATIVE PHOTOSYNTHETIC CARBON CYCLE.

    Science.gov (United States)

    Tolbert, N. E.

    1997-06-01

    The C2 oxidative photosynthetic carbon cycle plus the C3 reductive photosynthetic carbon cycle coexist. Both are initiated by Rubisco, use about equal amounts of energy, must regenerate RuBP, and result in exchanges of CO2 and O2 to establish rates of net photosynthesis, CO2 and O2 compensation points, and the ratio of CO2 and O2 in the atmosphere. These concepts evolved from research on O2 inhibition, glycolate metabolism, leaf peroxisomes, photorespiration, 18O2/16O2 exchange, CO2 concentrating processes, and a requirement for the oxygenase activity of Rubisco. Nearly 80 years of research on these topics are unified under the one process of photosynthetic carbon metabolism and its self-regulation. PMID:15012254

  16. C4b-binding protein is present in affected areas of myocardial infarction during the acute inflammatory phase and covers a larger area than C3.

    Directory of Open Access Journals (Sweden)

    Leendert A Trouw

    Full Text Available BACKGROUND: During myocardial infarction reduced blood flow in the heart muscle results in cell death. These dying/dead cells have been reported to bind several plasma proteins such as IgM and C-reactive protein (CRP. In the present study we investigated whether fluid-phase complement inhibitor C4b-binding protein (C4BP would also bind to the infarcted heart tissue. METHODS AND FINDINGS: Initial studies using immunohistochemistry on tissue arrays for several cardiovascular disorders indicated that C4BP can be found in heart tissue in several cardiac diseases but that it is most abundantly found in acute myocardial infarction (AMI. This condition was studied in more detail by analyzing the time window and extent of C4BP positivity. The binding of C4BP correlates to the same locations as C3b, a marker known to correlate to the patterns of IgM and CRP staining. Based on criteria that describe the time after infarction we were able to pinpoint that C4BP binding is a relatively early marker of tissue damage in myocardial infarction with a peak of binding between 12 hours and 5 days subsequent to AMI, the phase in which infiltration of neutrophilic granulocytes in the heart is the most extensive. CONCLUSIONS: C4BP, an important fluid-phase inhibitor of the classical and lectin pathway of complement activation binds to jeopardized cardiomyocytes early after AMI and co-localizes to other well known markers such as C3b.

  17. Vibration-assisted resonance in photosynthetic excitation energy transfer

    CERN Document Server

    Irish, E K; Lovett, B W

    2013-01-01

    Coherent quantum energy transfer, as observed in photosynthetic pigment-protein complexes, is inhibited by energetic disorder. While this difficulty can be overcome to some extent by the addition of environmental noise, it has recently has begun to be appreciated that discrete intra- and/or intermolecular vibrational modes may play an important role in quantum dynamics. We present a microscopic mechanism by which intramolecular vibrational modes create resonant energy transfer pathways, enhancing the efficiency of both coherent and dephasing-assisted transfer. The principles of this vibration-assisted resonance are illustrated in a simple model based on one energy-transfer branch of the well-characterised Fenna-Matthews-Olson complex. Despite its simplicity, this model captures the interplay between strong electronic coupling that produces delocalised exciton states and resonance-enhanced weak coupling to local vibrational modes. Analytical and numerical results show that intramolecular vibrations can enhance...

  18. Single Molecule Spectroscopy on Photosynthetic Pigment-Protein Complexes

    CERN Document Server

    Jelezko, F; Schuler, S; Thews, E; Tietz, C; Wechsler, A; Wrachtrup, J

    2001-01-01

    Single molecule spectroscopy was applied to unravel the energy transfer pathway in photosynthetic pigment-protein complexes. Detailed analysis of excitation and fluorescence emission spectra has been made for peripheral plant antenna LHC II and Photosystem I from cyanobacterium Synechococcus elongatus. Optical transitions of individual pigments were resolved under nonselective excitation of antenna chlorophylls. High-resolution fluorescence spectroscopy of individual plant antenna LHC II indicates that at low temperatures, the excitation energy is localized on the red-most Chl a pool absorbing at 680 nm. More than one pigment molecule is responsible for the fluorescence emission of the LHC II trimer. The spectral lines of single Chl a molecules absorbing at 675 nm are broadened because of the Foerster energy transfer towards the red-most pigments. Low-temperature spectroscopy on single PS I trimers indicates that two subgroups of pigments, which are present in the red antenna pool, differ by the strength of t...

  19. Evolutionary origins, molecular cloning and expression of carotenoid hydroxylases in eukaryotic photosynthetic algae

    OpenAIRE

    Cui, Hongli; Yu, Xiaona; Wang, Yan; Cui, Yulin; Li, Xueqin; Liu, Zhaopu; Qin, Song

    2013-01-01

    Background Xanthophylls, oxygenated derivatives of carotenes, play critical roles in photosynthetic apparatus of cyanobacteria, algae, and higher plants. Although the xanthophylls biosynthetic pathway of algae is largely unknown, it is of particular interest because they have a very complicated evolutionary history. Carotenoid hydroxylase (CHY) is an important protein that plays essential roles in xanthophylls biosynthesis. With the availability of 18 sequenced algal genomes, we performed a c...

  20. Measurement of bubble velocity using Capacitively Coupled Contactless Conductivity Detection (C4D) technique

    Institute of Scientific and Technical Information of China (English)

    Baoliang Wang; Ying Zhou; Haifeng Ji; Zhiyao Huang; Haiqing Li

    2013-01-01

    The feasibility of applying Capacitively Coupled Contactless Conductivity Detection (C4D) technique to measurement of bubble velocity in gas-liquid two-phase flow in millimeter-scale pipe is investigated.And,a new method,which combines the C4D technique and the principle of cross-correlation velocity measurement,is proposed for the measurement of bubble velocity.This research includes two parts.First,based on the principle of C4D,a new five-electrode C4D sensor is developed.Then,with two conductivity signals obtained by the C4D sensor,the velocity measurement of bubble is implemented according to the principle of cross-correlation.The research results indicate that the C4D technique is highly effective and anticipates a broad potential in the field of two-phase flow.Experimental results show that the fiveelectrode C4D sensor is suitable for measuring the velocity of single bubbles with a relative error of less than 5%.

  1. C4 protein of Beet severe curly top virus is a pathomorphogenetic factor in Arabidopsis.

    Science.gov (United States)

    Park, Jungan; Hwang, Hyun-Sik; Buckley, Kenneth J; Park, Jong-Bum; Auh, Chung-Kyun; Kim, Dong-Giun; Lee, Sukchan; Davis, Keith R

    2010-12-01

    The Curtovirus C4 protein is required for symptom development during infection of Arabidopsis. Transgenic Arabidopsis plants expressing C4 from either Beet curly top virus or Beet severe curly top virus produced phenotypes that were similar to symptoms seen during infection with wild-type viruses. The pseudosymptoms caused by C4 protein alone were novel to transgenic Arabidopsis and included bumpy trichomes, severe enations, disorientation of vascular bundles and stomata, swelling, callus-like structure formation, and twisted siliques. C4 induced abnormal cell division and altered cell fate in a variety of tissues depending on the C4 expression level. C4 protein expression increased the expression levels of cell-cycle-related genes CYCs, CDKs and PCNA, and suppressed ICK1 and the retinoblastoma-related gene RBR1, resulting in activation of host cell division. These results suggest that the Curtovirus C4 proteins are involved actively in host cell-cycle regulation to recruit host factors for virus replication and symptom development. PMID:20960205

  2. Ultrafast fluorescence of photosynthetic crystals and light-harvesting complexes

    NARCIS (Netherlands)

    Oort, van B.F.

    2008-01-01

    This thesis focuses on the study of photosynthetic pigment protein complexes using time resolved fluorescence techniques. Fluorescence spectroscopy often requires attaching fluorescent labels to the proteins under investigation. With photosynthetic proteins this is not necessary, because these prote

  3. Molecular characterization of novel photosynthetic protozoan phylum from corals

    OpenAIRE

    Cihlář, Jaromír

    2010-01-01

    Novel photosynthetic protozoan phylum from caorals eas investigated using molecular biology tools to infer phylogenetic position. According to the data, isolates RM11-26 are also photosynthetic relatives of apicomplexan parasites representing an independent lineage from Chromera velia

  4. Comparative Genomic Study of the Thioredoxin Family in Photosynthetic Organisms with Emphasis on Populus trichocarpa

    Institute of Scientific and Technical Information of China (English)

    Kamel Chibani; Gunnar Wingsle; Jean-Pierre Jacquot; Eric Gelhaye; Nicolas Rouhier

    2009-01-01

    The recent genome sequencing of Populus trichocarpa and Vitis vinifera, two models of woody plants, of Sorghum bicolor, a model of monocot using C4 metabolism, and of the moss Physcomitrella patens, together with the availability of photosynthetic organism genomes allows performance of a comparative genomic study with organisms having different ways of life, reproduction modes, biological traits, and physiologies. Thioredoxins (Trxs) are small ubiq-uitous proteins involved in the reduction of disulfide bridges in a variety of target enzymes present in all sub-cellular compartments and involved in many biochemical reactions. The genes coding for these enzymes have been identified in these newly sequenced genomes and annotated. The gene content, organization and distribution were compared to other photosynthetic organisms, leading to a refined classification. This analysis revealed that higher plants and bryo-phytes have a more complex family compared to algae and cyanobacteria and to non-photosynthetic organisms, since poplar exhibits 49 genes coding for typical and atypical thioredoxins and thioredoxin reductases, namely one-third more than monocots such as Oryza sativa and S. bicolor. The higher number of Trxs in poplar is partially explained by gene duplication in the Trx m, h, and nucleoredoxin classes. Particular attention was paid to poplar genes with emphasis on Trx-like classes called Clot, thioredoxin-like, thioredoxins of the lilium type and nucleoredoxins, which were not described in depth in previous genomic studies.

  5. Complement split products c3a and c4a in chronic lyme disease.

    Science.gov (United States)

    Stricker, R B; Savely, V R; Motanya, N C; Giclas, P C

    2009-01-01

    Complement split products C3a and C4a are reportedly elevated in patients with acute Lyme disease. We have now examined these immunologic markers in patients with chronic Lyme disease compared to appropriate disease controls. The study population consisted of 29 healthy controls, 445 patients with chronic Lyme disease, 11 patients with systemic lupus erythematosus (SLE) and six patients with AIDS. The Lyme disease patients were divided according to predominant musculoskeletal symptoms (324 patients) or predominant neurologic symptoms (121 patients). C3a and C4a levels were measured by radioimmunoassay. All patients with chronic Lyme disease and AIDS had normal C3a levels compared to controls, whereas patients with SLE had significantly increased levels of this marker. Patients with predominant musculoskeletal symptoms of Lyme disease and AIDS patients had significantly increased levels of C4a compared to either controls, patients with predominant neurologic symptoms of Lyme disease or SLE patients. Response to antibiotic therapy in chronic Lyme disease was associated with a significant decrease in the C4a level, whereas lack of response was associated with a significant increase in this marker. In contrast, AIDS patients had persistently increased C4a levels despite antiretroviral therapy. Lyme patients with positive single-photon emission computed tomographic (SPECT) scans had significantly lower C4a levels compared to Lyme patients with normal SPECT scan results. Patients with predominant musculoskeletal symptoms of Lyme disease have normal C3a and increased C4a levels. This pattern differs from the increase in both markers seen in acute Lyme disease, and C4a changes correlate with the response to therapy in chronic Lyme disease. C4a appears to be a valuable immunologic marker in patients with persistent symptoms of Lyme disease.

  6. From museums to genomics: old herbarium specimens shed light on a C3 to C4 transition.

    Science.gov (United States)

    Besnard, Guillaume; Christin, Pascal-Antoine; Malé, Pierre-Jean G; Lhuillier, Emeline; Lauzeral, Christine; Coissac, Eric; Vorontsova, Maria S

    2014-12-01

    Collections of specimens held by natural history museums are invaluable material for biodiversity inventory and evolutionary studies, with specimens accumulated over 300 years readily available for sampling. Unfortunately, most museum specimens yield low-quality DNA. Recent advances in sequencing technologies, so called next-generation sequencing, are revolutionizing phylogenetic investigations at a deep level. Here, the Illumina technology (HiSeq) was used on herbarium specimens of Sartidia (subfamily Aristidoideae, Poaceae), a small African-Malagasy grass lineage (six species) characteristic of wooded savannas, which is the C3 sister group of Stipagrostis, an important C4 genus from Africa and SW Asia. Complete chloroplast and nuclear ribosomal sequences were assembled for two Sartidia species, one of which (S. perrieri) is only known from a single specimen collected in Madagascar 100 years ago. Partial sequences of a few single-copy genes encoding phosphoenolpyruvate carboxylases (ppc) and malic enzymes (nadpme) were also assembled. Based on these data, the phylogenetic position of Malagasy Sartidia in the subfamily Aristidoideae was investigated and the biogeographical history of this genus was analysed with full species sampling. The evolutionary history of two genes for C4 photosynthesis (ppc-aL1b and nadpme-IV) in the group was also investigated. The gene encoding the C4 phosphoenolpyruvate caroxylase of Stipagrostis is absent from S. dewinteri suggesting that it is not essential in C3 members of the group, which might have favoured its recruitment into a new metabolic pathway. Altogether, the inclusion of historical museum specimens in phylogenomic analyses of biodiversity opens new avenues for evolutionary studies.

  7. Electron attachment properties of c-C4F8O in different environments

    Science.gov (United States)

    Chachereau, A.; Fedor, J.; Janečková, R.; Kočišek, J.; Rabie, M.; Franck, C. M.

    2016-09-01

    The electron attachment properties of octafluorotetrahydrofuran (c-C4F8O) are investigated using two complementary experimental setups. The attachment and ionization cross sections of c-C4F8O are measured using an electron beam experiment. The effective ionization rate coefficient, electron drift velocity and electron diffusion coefficient in c-C4F8O diluted to concentrations lower than 0.6% in the buffer gases N2, CO2 and Ar, are measured using a pulsed Townsend experiment. A kinetic model is proposed, which combines the results of the two experiments.

  8. Carbon isotope ratios of C4 plants in loess areas of North China

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Carbon isotope ratios (δ13C) of 89 C4 plant samples were determined from the loess area in North China. δ13C values vary between -10.5‰ and -14.6‰ with a mean of -12.6‰. Along a precipitation gradient from the semi-moist area to the semiarid area, then to the arid area, the δ13C values of C4 plants show a slight decreasing trend. The δ13C values of C4 plants in the dry season are found lower than those in the wet season. These trends are opposite to those observed for C3 species.

  9. Mutants of complement component C3 cleaved by the C4-specific C1-s protease.

    OpenAIRE

    Mathias, P; Carrillo, C J; Zepf, N E; Cooper, N R; Ogata, R T

    1992-01-01

    To identify some of the structural features determining specific protease recognition of complement components C3 and C4, we used site-specific mutagenesis to construct mutants of murine C3 that are cleaved by the C4-specific C1-s protease. Insertion of three amino acid residues corresponding to residues at the C1-s cleavage site of human C4 into murine C3 at the analogous C3 convertase cleavage site was adequate to render the mutant protein susceptible to C1-s cleavage. In addition, insertio...

  10. Photosynthetic production of hydrogen by algae

    Energy Technology Data Exchange (ETDEWEB)

    Chang, H.

    1978-09-01

    Because hydrogen as a fuel is very attractive both in energy and ecological terms, the photosynthetic production of hydrogen by some algae is attracting considerable attention. In addition to the ordinary photosynthetic mechanisms, many algae have enzymes which can produce hydrogen: hydrogenation enzymes and nitrogen-fixation enzymes. Certain enzymes with the former begin to produce hydrogen after several hours in an anaerobic envirionment; the reason for the delay is that the hydrogen-producing enzymes must adjust to the anaerobic conditions. Eventually the production of hydrogen ceases because production of oxygen by the ordinary photosynthetic mechanism suppresses activity of the hydrogen-producing enzymes. Any use of these algae to produce hydrogen must involve alternating hydrogen production and rest. Nitrogen-fixing enzymes are found especially in the blue-green algae. These seem to produce hydrogen from organic compounds produced by the ordinary photosynthetic process. The nitrogen-fixation type of hydrogen-producing photosynthesis seems the more promising type for future exploitation.

  11. Enhanced Practical Photosynthetic CO2 Mitigation

    Energy Technology Data Exchange (ETDEWEB)

    Gregory Kremer; David J. Bayless; Morgan Vis; Michael Prudich; Keith Cooksey; Jeff Muhs

    2004-07-15

    This report highlights significant achievements in the Enhanced Practical Photosynthetic CO{sub 2} Mitigation Project for the period ending 06/30/2004. The major accomplishment was the modification of the header and harvesting work, with a system designed to distribute algae at startup, sustain operations and harvest in one unit.

  12. Commercial Practice on Technology for High- Temperature Cracking of C4 Fraction to Increase Propylene Yield

    Institute of Scientific and Technical Information of China (English)

    Yu Darong; Zhang Zhigang

    2003-01-01

    This article refers to the results of small-scale and commercial tests on high-temperature cracking of C4 fraction in FCC unit to increase the propylene yield. The bench tests revealed that the conversion rate of C4 fraction during high-temperature cracking reached 37.38 % and propylene yield was equal to 15.60 % with the conversion rate of C4 olefins equating around 50%. The results of commercial application showed that adoption of the technology for high-temperature cracking of C4 fraction in FCC unit had led to an increase of propylene yield by 2.16 % with no remarkable changes in the yields and properties of other products.

  13. Discovery of C4 species at high altitude in Qinghai-Tibetan Plateau

    Institute of Scientific and Technical Information of China (English)

    WANG Luo; L(U) Houyuan; WU Naiqin; CHU Duo; HAN Jiamao; WU Yuhu; WU Haibin; GU Zhaoyan

    2004-01-01

    Plant specimens are collected from the areas between latitude 27°42'N and 40°57'N, and longitude 88°93'E and 103°24'E, with an altitudinal range from 2210 to 5050 m above the sea level in Qinghai-Tibetan Plateau. The stable carbon isotope analysis indicates that two of Chenopodiaceae and six of Poaceae in the samples are C4 plants. Four of the C4 plants are found in 11 spots with altitudes above 3800 m,and Pennisetum centrasiaticum, Arundinella yunnanensis and Orinus thoroldii are present in six spots above 4000 m, even up to 4520 m. At low CO2 partial pressure, that sufficient energy of high light improving C4 plant's tolerance of low temperature and precipitations concentrating in growing season probably are favorable for C4 plants growing at high altitude in Qinghai-Tibetan Plateau.

  14. Comparative analysis of plastid genomes of non-photosynthetic Ericaceae and their photosynthetic relatives

    Science.gov (United States)

    Logacheva, Maria D.; Schelkunov, Mikhail I.; Shtratnikova, Victoria Y.; Matveeva, Maria V.; Penin, Aleksey A.

    2016-01-01

    Although plastid genomes of flowering plants are typically highly conserved regarding their size, gene content and order, there are some exceptions. Ericaceae, a large and diverse family of flowering plants, warrants special attention within the context of plastid genome evolution because it includes both non-photosynthetic and photosynthetic species with rearranged plastomes and putative losses of “essential” genes. We characterized plastid genomes of three species of Ericaceae, non-photosynthetic Monotropa uniflora and Hypopitys monotropa and photosynthetic Pyrola rotundifolia, using high-throughput sequencing. As expected for non-photosynthetic plants, M. uniflora and H. monotropa have small plastid genomes (46 kb and 35 kb, respectively) lacking genes related to photosynthesis, whereas P. rotundifolia has a larger genome (169 kb) with a gene set similar to other photosynthetic plants. The examined genomes contain an unusually high number of repeats and translocations. Comparative analysis of the expanded set of Ericaceae plastomes suggests that the genes clpP and accD that are present in the plastid genomes of almost all plants have not been lost in this family (as was previously thought) but rather persist in these genomes in unusual forms. Also we found a new gene in P. rotundifolia that emerged as a result of duplication of rps4 gene. PMID:27452401

  15. C4齐聚物及其加氢产物的分析

    Institute of Scientific and Technical Information of China (English)

    薛慧峰; 笪敏峰; 赵家林

    2004-01-01

    The components in C4 oligmer and its hydrogenated product were separated on capillary columns. The methods including retention time, chemical reaction, gas chromatography-mass spectrometry and gas chromatography-infrared spectrmetry were used to identify the components. The content of component was calculated by area normalization.The comparative analysis of C8 hydrocarbons in C4 oligmer and its hydrogenated product shows that the results are obviously different due to different conditions of hydrogenation.

  16. New introductions of enterovirus 71 subgenogroup C4 strains, France, 2012.

    Science.gov (United States)

    Schuffenecker, Isabelle; Henquell, Cécile; Mirand, Audrey; Coste-Burel, Marianne; Marque-Juillet, Stéphanie; Desbois, Delphine; Lagathu, Gisèle; Bornebusch, Laure; Bailly, Jean-Luc; Lina, Bruno

    2014-08-01

    In France during 2012, human enterovirus 71 (EV-A71) subgenogroup C4 strains were detected in 4 children hospitalized for neonatal fever or meningitis. Phylogenetic analysis showed novel and independent EV-A71 introductions, presumably from China, and suggested circulation of C4 strains throughout France. This observation emphasizes the need for monitoring EV-A71 infections in Europe. PMID:25061698

  17. d_c=4 is the upper critical dimension for the Bak-Sneppen model

    OpenAIRE

    Boettcher, S.; Paczuski, M.

    1999-01-01

    Numerical results are presented indicating d_c=4 as the upper critical dimension for the Bak-Sneppen evolution model. This finding agrees with previous theoretical arguments, but contradicts a recent Letter [Phys. Rev. Lett. 80, 5746-5749 (1998)] that placed d_c as high as d=8. In particular, we find that avalanches are compact for all dimensions d4. Under those conditions, scaling arguments predict a d_c=4, where hyperscaling relations hold for d

  18. Divergent evolutionary histories of C4 grasses shape global grassland ecology

    Science.gov (United States)

    Lehmann, C.; Griffith, D.; Osborne, C.

    2014-12-01

    C4 photosynthesis has evolved in more than 23 independent lineages of grasses as an adaptation to hot, sunny conditions. Geological records demonstrate that C4 grasses abruptly became ecologically dominant during the late Cenozoic across the tropical and temperate regions, transforming the Earth System and facilitating major faunal and floral radiations. However, although each C4 grass lineage originated and specialised in different environments, the importance of these divergent evolutionary histories for global ecology remains largely unknown. Here, we address this problem by compiling the first global map of grassy biomes based entirely upon ground-based vegetation surveys of dominant species. Our analysis shows that grasses dominate the ground layer across 40% of the vegetated land surface, with C4 grasses accounting for 60% of this area, and grassy biomes occurring under almost all climatic conditions. More than 98% of C3 grassy vegetation is dominated by the cold tolerant Pooideae lineage, which is replaced by C4 lineages at mean annual temperatures exceeding 15oC. The world's C4 grassy vegetation is largely dominated by only four of the 23 independent C4 grass lineages, and these segregate strongly along global environmental gradients and across continents. The Chloridoideae lineage is globally important in dominating semi-arid environments with a long fire return interval. In contrast, although the Andropogoneae lineage dominates extremely wet regions with frequent fire in the Paleotropics and North America, the same niche space is dominated by Paspaleae in South America. Sorting of lineages along precipitation and fire gradients is strongly predicted by plant height. Our results demonstrate that the divergent histories of independent C4 grass lineages have constrained the assembly and functional traits of grassy biomes, with important implications for understanding how biome boundaries may shift in past and future environments.

  19. COBP and Its Effect on Evaluation of C4ISR System%COBP方法及其在C4ISR系统评价中的作用

    Institute of Scientific and Technical Information of China (English)

    胡鹏; 刘俊先; 袁卫卫

    2004-01-01

    COBP(NATO Code of Best Practice for C2 Assessment)是北大西洋公约组织近期用来指导C4ISR系统效能评估的最新理论成果,本文首先对其主要部分进行了总结,详细阐述了它的评估过程,接下来给出了外军应用COBP方法进行C4ISR系统评估的一个应用实例,最后比较了COBP方法与其他系统效能评估框架的异同,总结指出COBP方法对我军指挥自动化系统评估的借鉴意义.

  20. Carbon dioxide starvation, the development of C4 ecosystems, and mammalian evolution.

    Science.gov (United States)

    Cerling, T E; Ehleringer, J R; Harris, J M

    1998-01-29

    The decline of atmospheric CO2 over the last 65 million years (Ma) resulted in the 'CO2-starvation' of terrestrial ecosystems and led to the widespread distribution of C4 plants, which are less sensitive to CO2 levels than are C3 plants. Global expansion of C4 biomass is recorded in the diets of mammals from Asia, Africa, North America, and South America during the interval from about 8 to 5 Ma. This was accompanied by the most significant Cenozoic faunal turnover on each of these continents, indicating that ecological changes at this time were an important factor in mammalian extinction. Further expansion of tropical C4 biomass in Africa also occurred during the last glacial interval confirming the link between atmospheric CO2 levels and C4 biomass response. Changes in fauna and flora at the end of the Miocene, and between the last glacial and interglacial, have previously been attributed to changes in aridity; however, an alternative explanation for a global expansion of C4 biomass is CO2 starvation of C3 plants when atmospheric CO2 levels dropped below a threshold significant to C3 plants. Aridity may also have been a factor in the expansion of C4 ecosystems but one that was secondary to, and perhaps because of, gradually decreasing CO2 concentrations in the atmosphere. Mammalian evolution in the late Neogene, then, may be related to the CO2 starvation of C3 ecosystems. PMID:9507562

  1. Differential resource utilization by extant great apes and australopithecines: towards solving the C4 conundrum.

    Science.gov (United States)

    Sponheimer, Matt; Lee-Thorp, Julia A

    2003-09-01

    Morphological and biogeochemical evidence suggest that australopithecines had diets markedly different from those of extant great apes. Stable carbon isotope analysis, for example, has shown that significant amounts of the carbon consumed by australopithecines were derived from C(4) photosynthesis in plants. This means that australopithecines were eating large quantities of C(4) plants such as tropical grasses and sedges, or were eating animals that were themselves eating C(4) plants. In contrast, there is no evidence that modern apes consume appreciable amounts of any of these foods, even in the most arid extents of their ranges where these foods are most prevalent. Environmental reconstructions of early australopithecine environments overlap with modern chimpanzee habitats. This, in conjunction with the stable isotope evidence, suggests that australopithecines and great apes, even in similar environments, would utilize available resources differently. Thus, the desire or capacity to use C(4) foods may be a basal character of our lineage. We do not know, however, which of the nutritionally disparate C(4) foods were utilized by hominids. Here we discuss which C(4) resources were most likely consumed by australopithecines, as well as the potential nutritional, physiological, and social consequences of eating these foods. PMID:14527627

  2. Photosynthetic characteristics of PEPC transgenic rice

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    @@ With the rapid development of molecular biological technology,transfering foreign genes into crops has become an increasing routine,and making it possible to induce the genes encoding C4 photosynthesis enzyme into C3 plants.

  3. Comparative proteomics of chloroplasts envelopes from bundle sheath and mesophyll chloroplasts reveals novel membrane proteins with a possible role in C4-related metabolite fluxes and development.

    Directory of Open Access Journals (Sweden)

    Kalpana eManandhar-Shrestha

    2013-03-01

    Full Text Available As the world population grows, our need for food increases drastically. Limited amounts of arable land lead to a competition between food and fuel crops, while changes in the global climate may impact future crop yields. Thus, a second green revolution will need a better understanding of the processes essential for plant growth and development. One approach toward the solution of this problem is to better understand regulatory and transport processes in C4 plants. C4 plants display an up to 10-fold higher apparent CO2 assimilation and higher yields while maintaining high water use efficiency. This requires differential regulation of mesophyll (M and bundle sheath (BS chloroplast development as well as higher metabolic fluxes of photosynthetic intermediates between cells and across chloroplast envelopes. While previous analyses of overall chloroplast membranes have yielded significant insight, our comparative proteomics approach using enriched BS and M chloroplast envelopes of Zea mays allowed us to identify 37 proteins of unknown function that have not been seen in these earlier studies. We identified 280 proteins, 84% of which are known/predicted to be present in chloroplasts (cp. 74% have a known or predicted membrane association. 21 membrane proteins were 2-15 times more abundant in BS cells, while 36 proteins were more abundant in M cp envelopes. These proteins could represent additional candidates of proteins essential for development or metabolite transport processes in C4 plants. RT-PCR confirmed differential expression of thirteen candidate genes. Cp association was confirmed using GFP labeling. Genes for a PIC-like protein and an ER-AP-like protein show an early transient increase in gene expression during the transition to light. In addition, PIC gene expression is increased in the immature part of the leaf and was lower in the fully developed parts of the leaf, suggesting a need for/incorporation of the protein during chloroplast

  4. Detection of the photosynthesis protective mechanisms of C3 and C4 Crops from hyper spectral data%C3、C4作物的光保护机制差异的光谱探测研究

    Institute of Scientific and Technical Information of China (English)

    刘良云; 关琳琳; 彭代亮; 胡勇; 刘玲玲

    2012-01-01

    this did not appear in maize; (3) the midday photosynthetic depression occurred in C3 crops owing to the stressed light and temperature, with a rapid increase in PRI. However, there was no apparent noon depression in C4 crops. Based on the different characteristics between the responses of C3 and C4 crops to high irradiance and temperature stressws, we proposed a potential method to discriminate C3 and C4 plants by multitemporal and hyper spectral remote sensing data.

  5. Aromatization of Huabei C4 liquefied petroleum gas%华北C4液化气芳构化的研究

    Institute of Scientific and Technical Information of China (English)

    由宏君

    2007-01-01

    以华北C4液化气和华北C4液化气与中国石油兰州石化公司炼油厂FCC汽油为原料,采用小型固定流化床为芳构化反应装置,考察了反应温度和空速对华北C4液化气芳构化产物收率、转化率、马达法辛烷值、研究法辛烷值、液体产品组成的影响规律和华北C4液化气与中国石油兰州石化公司炼油厂FCC汽油的不同进料形式对芳构化反应的影响.实验结果表明,随反应温度的升高,干气、液化气和焦炭收率呈上升趋势,而汽油和柴油收率呈下降趋势,液体产物的马达法辛烷值和研究法辛烷值随反应温度的升高先增大后减小,当温度为430℃时,马达法辛烷值和研究法辛烷值存在最大值;随着空速的增加,干气和液化气的收率逐渐增加,而汽油、柴油和焦炭的收率呈缓慢下降的趋势;华北C4液化气的转化率均在97%以上,且随空速的升高而逐渐增加;液体产物的马达法辛烷值和研究法辛烷值随空速的升高先增加后减少,在空速(1~9)h-1内存在最大值.华北C4液化气芳构化实验室内的最佳操作条件:反应温度(430~450)℃,空速(3~5)h-1.对于华北C4液化气与中国石油兰州石化公司炼油厂FCC汽油混炼而言,先通入汽油后通入液化气的汽油和柴油收率和液体中的芳烃含量明显高于液化气和汽油同时进料和先通入液化气后通入汽油.

  6. Capillary Deposition of Complement C4d and C3d in Chinese Renal Allograft Biopsies

    Directory of Open Access Journals (Sweden)

    Rong Lv

    2015-01-01

    Full Text Available Background. C3d is a product of both the classic and the alternative complement cascades; however, few studies have addressed the role of C3d in renal biopsies and its relationship with long-term graft survival rate is not very clear. Methods. 94 patients with biopsy-proven acute rejection episodes were included in the study. We investigated the associations between histological findings, clinical examinations, and outcome. Results. The overall prevalence for C4dPTC and C3dPTC was 42.6% and 29.8%. There was a significant association between C3dPTC and C4dPTC (P<0.001. C3dPTC and C4dPTC were related with histological types (P=0.024 and P<0.001, resp.. The long-term survival rate for C4dPTC positive transplants was lower than that of C4dPTC negative transplants, but it was not statistic significant in our study (P=0.150. The survival rate of C3dPTC positive group was much lower than the negative group (P=0.014. Patients with double positives for C4dPTC and C3dPTC exhibited the lowest survival rate significantly different from those of the C3dPTC only and C4dPTC only groups (P=0.01 and P=0.0037. Conclusions. This longitudinal cohort study has demonstrated that C3d deposition in the PTC was closely related to renal dysfunction and pathological changes.

  7. Emergence of enterovirus 71 C4a in Denmark, 2009 to 2013.

    Science.gov (United States)

    Fischer, T K; Nielsen, A Y; Sydenham, T V; Andersen, P H; Andersen, B; Midgley, S E

    2014-01-01

    Enterovirus (EV) 71 has emerged as a primary cause of severe neurologic enterovirus infection in the aftermath of the global polio eradication effort. Eleven subgenotypes of EV71 exist, the C4 subgenotype being associated with large outbreaks in Asia with high mortality rates. This subgenotype has rarely been reported in Europe. In the period between 1 January 2009 and 31 December 2013 a total of 1,447 EV positive samples from 1,143 individuals were sent to the Statens Serum Institute (SSI), and 938 samples from 913 patients were genotyped at the Danish National World Health Organization Reference laboratory for Poliovirus at SSI. Echovirus 6 (E06) (n=141 patients), echovirus 30 (E30) (n=114), coxsackievirus A6 (CA06) (n=96) and EV71 (n=63) were the most prevalent genotypes. We observed a shift in circulating EV71 subgenotypes during the study period, with subgenotype C4 dominating in 2012. A total of 34 EV71 patients were found to be infected with strains of the C4 subgenotype, and phylogenetic analysis revealed that they belonged to the C4a lineage. In our study, the proportions of cases with cerebral and/or sepsis-like symptoms were similar in those affected by C4a (19/34) and those with C1 and C2 (15/35). The majority (n=30) of the 34 EV71 C4 cases were children≤5 years of age, and males (n=22) were over-represented. Continued EV surveillance is required to monitor the spread of EV71 C4 in Denmark and the rest of Europe. PMID:25306878

  8. Precise identification of photosynthetic glycerolipids in microalga Tetraselmis chuii by UPLC-ESI-Q-TOF-MS

    Institute of Scientific and Technical Information of China (English)

    LI HaWing; YAN XiaoJun; Xu JiLin; ZHOU ChengXu

    2008-01-01

    Precise structural identification of photosynthetic polar glycerolipids in microalga Tetraselmis chuii has been established using Ultra Performance Liquid Chromatography-Electrospray ionizationQuadrupole-Time of Flight Mass Spectrometry (UPLC-ESI-Q-TOF-MS) by direct analysis of the total lipids extract. The mass spectrometry was performed in reflective time-of-flight using electron spraying ionization in both positive and negative modes. The structural determination was based on the characteristic product ions yielded by different glycerolipids under ESI-MS/MS mode, and co firmed the molecular species by the carboxylate anions produced by glycerolipids in the negative mode. As a result, more than 40 lipid molecular species, including 11 monogalactosyldiacylglycerols (MGDG), 7 digalactosyldiacylglyoerols (DGDG), 16 sulfoquinovosyldiacylglycerols (SQDG), and 9 phosphatidylglycerols (PG), were detected in Tetraselmis ohuii, which had never been identified before in this mioroalga. Furthermore, some intact lipid molecules with hydroxylated fatty acids that could not be detected by the traditional GO-MS method were found this time, providing novel information for the photosynthetic lipidome of Tetraselmis chuii. Comparative studies on fatty acids at the sn-2 position showed that SQDG and MGDG are dominantly biosynthesized through the prokaryotic pathway, PG is a typically mixed biosynthetic pathway, while DGDG is somewhat peculiar with C14:0 and C16:0 at its sn-2 position. This method could provide a full structural profile of intact photosynthetic lipid molecular species, which may be applied to study the physiological and ecological functions of lipid by monitoring their individual changes.

  9. Differential Diagnosis Knowledge Building by Using CUC-C4.5 Framework

    Directory of Open Access Journals (Sweden)

    Kusrini

    2010-01-01

    Full Text Available Problem statement: The Case Based Reasoning (CBR method can be implemented in differential diagnosis analysis. C4.5 algorithm has been commonly used to help the method's knowledge building process. This process is completed by constructing decision tree from previously handled cases data. The C4.5 algorithm itself can be used with an assumption that all the cases has an exact and equal truth value thus have an exact contribution in decision tree building process. However, the decision makers sometimes not sure about the truth of the cases in the cases database, therefore the confidence value can be different for case by case. Besides that, the C4.5 algorithm can only handle cases that are stored in a flat table with data in form of categorized text or in discrete class. This algorithm has not yet explained about how is decision tree building mechanism in situation when the data are stored in relational tables. It also has not yet explained about the process of knowledge building when the data are in the form of number in continuous class. Meanwhile, the observed objects in this research, that is medical record data, are mostly stored in a complex relational database and have common form of categorized text, discrete number, continuous number and image. Therefore, the C4.5 is needed to be improved so it can handle decision building for cases database of medical record. Approach: We develop a knowledge building framework that can handle confidence level difference of cases in cases database. The framework we build also allows the data are stored in relational database. Moreover, our framework can process data in the form of categorized text, discrete number, continuous number and image. This framework is named CUC-C4.5, abbreviated from Complex Uncertain Case C4.5 as it is the improvement from C4.5 algorithm. Results: The CUC-C4.5 framework has been applied on the case of differential diagnosis knowledge building in a group decision support system

  10. Photosynthetic hydrogen and oxygen production - Kinetic studies

    Science.gov (United States)

    Greenbaum, E.

    1982-01-01

    The simultaneous photoproduction of hydrogen and oxygen was measured in a study of the steady-state turnover times of two biological systems, by driving them into the steady state with repetitive, single-turnover flash illumination. The systems were: (1) in vitro, isolated chloroplasts, ferredoxin and hydrogenase; and (2) the anaerobically-adapted green alga Chlamydomonas reinhardtii. It is found that the turnover times for production of both oxygen and hydrogen in photosynthetic water splitting are in milliseconds, and either equal to, or less than, the turnover time for carbon dioxide reduction in intact algal cells. There is therefore mutual compatibility between hydrogen and oxygen turnover times, and partial compatibility with the excitation rate of the photosynthetic reaction centers under solar irradiation conditions.

  11. Correlated interaction fluctuations in photosynthetic complexes

    CERN Document Server

    Vlaming, Sebastiaan M

    2011-01-01

    The functioning and efficiency of natural photosynthetic complexes is strongly influenced by their embedding in a noisy protein environment, which can even serve to enhance the transport efficiency. Interactions with the environment induce fluctuations of the transition energies of and interactions between the chlorophyll molecules, and due to the fact that different fluctuations will partially be caused by the same environmental factors, correlations between the various fluctuations will occur. We argue that fluctuations of the interactions should in general not be neglected, as these have a considerable impact on population transfer rates, decoherence rates and the efficiency of photosynthetic complexes. Furthermore, while correlations between transition energy fluctuations have been studied, we provide the first quantitative study of the effect of correlations between interaction fluctuations and transition energy fluctuations, and of correlations between the various interaction fluctuations. It is shown t...

  12. Enhanced Practical Photosynthetic CO2 Mitigation

    Energy Technology Data Exchange (ETDEWEB)

    Gregory Kremer; David J. Bayless; Morgan Vis; Michael Prudich; Keith Cooksey; Jeff Muhs

    2004-10-13

    This report highlights significant achievements in the Enhanced Practical Photosynthetic CO{sub 2} Mitigation Project for the period ending 09/30/2004. The primary effort of this quarter was focused on mass transfer of carbon dioxide into the water film to study the potential effects on the photosynthetic organisms that depend on the carbon. Testing of the carbon dioxide scrubbing capability (mass transfer capability) of flowing water film appears to be relatively high and largely unaffected by transport of the gas through the bioreactor. The implications are that the transfer of carbon dioxide into the film is nearly at maximum and that it is sufficient to sustain photosynthesis at whatever rate the organisms can sustain. This finding is key to assuming that the process is an energy (photon) limited reaction and not a nutrient limited reaction.

  13. Synthesis and Characterization of Zinc Succinate, Zn(C4H4O4)

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Zn(C4H4O4) prepared by dissolving 0.483 g (1.41 mol) of Zn3(OH)4CO3*H2O and 0.5 g (4.23 mol) of C4H6O4 in 50 mL of H2O followed by slow evaporation at room temperature crystallizes in the monoclinic space group C2 with the cell parameters a=0.757 9(1) nm, b=0.597 6(1) nm, c=0.626 5(1) nm, β=108.45(1)°, V=0.269 17(7) nm3, Dx=2.239 \\{g/cm3\\}, Z=2 and the final R(Fo)=0.039 and wR(Fo2)=0.088 for 396 reflections [Fo2≥2σ(Fo2)]. In the crystal structure unit, each Zn is tetrahedrally coordinated by four O atoms from four (C4H4O4)2- anions, each of which, in turn, bridges four Zn atoms to build up a 3D \\{\\}3∞[Zn(C4H4O4)4/4] network. The thermal analyses indicate that Zn(C4H4O4) is stable below 420 ℃.

  14. Chronic effects of the ionic liquid [C4mim][Cl] towards the microalga Scenedesmus quadricauda

    International Nuclear Information System (INIS)

    Chronic effects of the ionic liquid [C4mim][Cl] (mp 73 °C) towards the microalga, Scenedesmus quadricauda were studied by flow cytometry, monitoring multiple endpoints of cell density, esterase activity, membrane integrity, reactive oxygen species and chlorophyll fluorescence. Toxicity was clearly in evidence, and although increased esterase activity indicated hormesis during initial exposure to [C4mim][Cl], inhibition of both esterase activity and chlorophyll fluorescence became apparent after 3 days. Cell density was also decreased by culturing with [C4mim][Cl], but this effect was clearly concentration-dependent and only became significant during the second half of the experiment. In contrast, [C4mim][Cl] had only a modest effect on reactive oxygen species (ROS) and caused little damage to cell membranes. - Highlights: • Use of an advanced biological technique, flow cytometry, to elucidate ionic liquid toxicity. • Chronic effects of ionic liquid. • Membrane integrity and ROS studied. • Mechanism of ionic liquid toxicity. - [C4mim][Cl] significantly inhibited esterase activity, chlorophyll fluorescence and cell density, having only a modest effect on reactive oxygen species and cell membranes

  15. The Remote Control Car Based on PSoC4%基于PSoC4的遥控小车

    Institute of Scientific and Technical Information of China (English)

    金绍敏; 张震

    2014-01-01

    "The remote control car Based on PSoC4"is a production company Cypress and ARM development board set PSoC4 motor drive modules, power management module , PSoC4 control module , Bluetooth serial communication module is based . L298N motor driver chip module uses a motor to drive the 4-way , 2-way connection Enable PWM wave signal from the control board , the four input termination power module 4 GND ports ( four output terminals tap four motors one pole , the other pole motor connected to the power supply module+5 V);power management module uses the LM2940-5.0 chip to convert 12V to 5V , 12V power supply for motor drive module , 5V for Bluetooth module , a motor power poles , etc.;master module using the MDK-editing program , and then downloaded to the control board , to achieve the interaction of hardware and software;Bluetooth serial communication module is the use of a needle inserted FBT06_LPDB Bluetooth module for serial communication with the control board , while communicating with the android phone; android control terminal module has to turn on Bluetooth , search for Bluetooth , control car functions. Users can control the car 's movement through the android control terminal,the user needs to implement some features and services .%“基于PSoC4的蓝牙控制小车”是一个基于Cypress与ARM公司生产的PSoC4开发板的集电机驱动模块、电源管理模块、PSoC4主控模块、蓝牙串口通信模块。电机驱动模块使用一个L298N芯片来驱动4路电机,使能端连接2路来自主控板的PWM波信号,4个输入端接电源模块的4个GND端口(4个输出端分接4个电机的一极,电机的另一极接电源模块的+5V);电源管理模块使用了LM2940-5.0芯片进行12V到5V的转换,12V用于电机驱动模块的供电,5V用于蓝牙模块、电机一极等的供电;主控模块采用了MDK编辑程序,然后下载到主控板,实现硬件与软件的交互;蓝牙串口通信模块则是采用了FBT06

  16. Ionizing radiation and photosynthetic ability of cyanobacteria

    International Nuclear Information System (INIS)

    Unicellular photoautotrophic cyanobacteria, Anacystis nidulans when exposed to lethal dose of 1.5 kGy of 60Co γ- radiation (D10= 257.32 Gy) were as effective photosynthetical as unirradiated controls immediately after irradiation although level of ROS was higher by several magnitudes in these irradiated cells. The results suggested the preservation of the functional integrity of thylakoids even after exposure to lethal dose of ionizing radiation. (author)

  17. Photosynthetic acclimation to high temperatures in wheat

    OpenAIRE

    Sayed, O. H.

    1992-01-01

    Growth and photosynthetic performance were assessed for the Finnish wheat Triticum aestivum L. var. APU under a cool (13/10�C day/night) and a warm (30/25�C day/night) regime. Plants exhibited a certain degree of acclimation to warm growth conditions. This acclimation appeared to involve enhanced performance of both photosystem II and whole-chain electron transport. Enhanced thermal stability of photophosphorylation was also observed in warm-grown plants.

  18. Eugenol--the active principle from cloves inhibits 5-lipoxygenase activity and leukotriene-C4 in human PMNL cells.

    Science.gov (United States)

    Raghavenra, H; Diwakr, B T; Lokesh, B R; Naidu, K A

    2006-01-01

    Polymorphonuclear leukocytes (PMNL) play an important role in the modulation of inflammatory conditions in humans. PMNL cells recruited at the site of inflammation, release inflammatory mediators such as leukotrienes, proteolytic enzymes and reactive oxygen species. Among these, leukotrienes are implicated in pathophysiology of allergic and inflammatory disorders like asthma, allergic rhinitis, arthritis, inflammatory bowel disease and psoriasis. 5-lipoxygenase (5-LO) is the key enzyme in biosynthetic pathway of leukotrienes. Our earlier studies showed that spice phenolic active principles significantly inhibit 5-LO enzyme in human PMNLs. In this study we have further characterized the inhibitory mechanism of eugenol, the active principle of spice-clove on 5-LO enzyme and also its effect on leukotriene C((4)) (LTC(4)). Substrate dependent enzyme kinetics showed that the inhibitory effect of eugenol on 5-LO was of a non-competitive nature. Further, eugenol was found to significantly inhibit the formation of LTC(4) in calcium ionophore A23187 and arachidonic acid (AA) stimulated PMNL cells. These data clearly suggest that eugenol inhibits 5-LO by non-competitive mechanism and also inhibits formation of LTC(4) in human PMNL cells and thus may have beneficial role in modulating 5-LO pathway in human PMNL cells.

  19. Studies on Photosynthetic Characteristics of Plum Leaves

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Many photosynthetic characteristics of three plum varieties were studied with a infrared CO2 analyzer. Results showed that plums belong to light-loving species,having a relative high light compensation point (75~ 80μmol · m-2 · s-1 ), In natural light range from none to 1400μmol · m-2s-1PAR,the light response curve of plum as a hyperbo and the net photosynthetic rate(Pn) in leavs increased with PA elevation. Pn of plum tree was 20 to 22.50mg CO2 · dm-1 · h-1 at 1380μmol · m-2 · s-1 PAR,indicating that plum was typi cal C3-type fruit tree. Diurnal change in Pn was a bimoal curve with the highest photosynthetic rate arising at about 10:00 a. m. indicated the clear“none-rest”characteristic in plum leaves. Among three varieties. SuiLi3 had the shortest“none-rest“time followed by JiLin6 and NuXinLi. Seasonal change in Pn was a bi modal curve with the first period of high Pn in late June and the second in late August. Pn in leaves decreased visibly in period of drought in Spring and Summer.

  20. Internet Traffic Classification Using C4.5 Decision Tree%基于C4.5决策树的流量分类方法

    Institute of Scientific and Technical Information of China (English)

    徐鹏; 林森

    2009-01-01

    近年来,利用机器学习方法处理流量分类问题成为网络测量领域一个新兴的研究方向.在现有研究中,朴素贝叶斯方法及其改进算法以其实现简单、分类高效的特点而被广泛应用.但此类方法过分依赖于样本在样本空间的分布,具有潜在的不稳定性.为此,引入C4.5决策树方法来处理流量分类问题.该方法利用训练数据集中的信息熵来构建分类模型,并通过对分类模型的简单查找来完成未知网络流样本的分类.理论分析和实验结果都表明,利用C4.5决策树来处理流量分类问题在分类稳定性上均具有明显的优势.%In recent years, Internet traffic classification using machine learning has become a new direction in network measurement. Being simple and efficient Naive Bayes and its improved methods have been widely used in this area. But these methods depend too much on probability distribution of sample spacing, so they have connatural instability. To handle this problem, a new method based on C4.5 decision tree is proposed in this paper. This method builds a classification model using information entropy in training data and classifies flows just by a simple search of the decision tree. The theoretical analysis and experimental results show that there are obvious advantages in classification stability when C4.5 decision tree method is used to classify Internet traffic.

  1. Was photosynthetic RuBisCO recruited by acquisitive evolution from RuBisCO-like proteins involved in sulfur metabolism?

    Science.gov (United States)

    Ashida, Hiroki; Danchin, Antoine; Yokota, Akiho

    2005-01-01

    Genome analyses have revealed that the genomes of non-photosynthetic bacteria including Bacillus subtilis code for proteins similar to the large subunit of RuBisCO (called RuBisCO-like protein (RLP)). This raises a fundamental question as to their functional relationship to photosynthetic RuBisCO. Recently, we identified the RLP of B. subtilis as the 2,3-diketo-5-methylthiopentyl-1-phosphate enolase in the methionine salvage pathway. In this mini-review, we suggest functional and evolutionary links between B. subtilis RLP and photosynthetic RuBisCO. Furthermore, we propose that photosynthetic RuBisCOs evolved from RLPs similar to that found in B. subtilis.

  2. Influence of Nucleating Agent on the Formation of C4A3S

    Institute of Scientific and Technical Information of China (English)

    GUO Huiling; XIE Junlin; ZHANG Shu; XU Qi

    2012-01-01

    The reference test methods are carried out parallelly,by means of chemical analysis,X-ray diffraction,differential scanning calorimetry-thermogravimetry,scanning electron microscopy and polarized optical microscope to study the formation of C4A3S in the presence and absence of nucleating agent.The results show that nucleating agent with high calcium and low heat consumption as tricalcium silicate (C3S) promotes the formation of C4A3S and increases desulfurization degree obviously.During calcining raw meals doped with C3S,the grain sizes of C4A3S are larger compared with that without C3S.And at the same calcining level,the mass loss and the heat consumption belonged to CaCO3 decomposition is reduced.

  3. The effect of C3 and C4 plants for the magneticsusceptibility signal in soils

    Institute of Scientific and Technical Information of China (English)

    吕厚远; 刘东生

    2001-01-01

    To understand the origin of the ultrafine pedogenic components responsible for the magnetic susceptibility (MS) enhancement remains a major challenging problem in linking magnetic signal with paleoclimate. Here we examine the effect of the natural fires on the MS signal of both plants and modern soils and in particular the MS difference between C3 and C4 plant ashes and their influence on magnetic susceptibility. We also proved the influence of the different floral root systems on the MS signal of modern soils. We find that the C3 and C4 plants are different in their ability to enhance MS signal of modern soils. Increased MS signal of modern soils by C4 plants was much greater than that by C3 plants.

  4. Al4SiC4 wurtzite crystal: Structural, optoelectronic, elastic, and piezoelectric properties

    Science.gov (United States)

    Pedesseau, L.; Even, J.; Modreanu, M.; Chaussende, D.; Sarigiannidou, E.; Chaix-Pluchery, O.; Durand, O.

    2015-12-01

    New experimental results supported by theoretical analyses are proposed for aluminum silicon carbide (Al4SiC4). A state of the art implementation of the density functional theory is used to analyze the experimental crystal structure, the Born charges, the elastic properties, and the piezoelectric properties. The Born charge tensor is correlated to the local bonding environment for each atom. The electronic band structure is computed including self-consistent many-body corrections. Al4SiC4 material properties are compared to other wide band gap wurtzite materials. From a comparison between an ellipsometry study of the optical properties and theoretical results, we conclude that the Al4SiC4 material has indirect and direct band gap energies of about 2.5 eV and 3.2 eV, respectively.

  5. C4.5 Classifier for Solving the Problem of Water Resources Engineering

    Directory of Open Access Journals (Sweden)

    Chih-Chiang Wei

    2011-01-01

    Full Text Available The conventional decision-tree algorithm, such as ID3 and C5.0, executes rapidly and can easily be translated into if-thenelse rules.  This paper introduces popular classifier C4.5 for dealing with water resources engineering  problem. The  proposed approach was applied to the Shihmen Reservoir, which is one of the largest reservoirs, located upstream of the Tahan River Basin of northern Taiwan. The existing rules, namely M5-C rules, include two main flood stages: the peak-flow-preceding stage and the peakflow-proceeding stage. The findings show superior performance of the C4.5 rules in contrast to M5-C rules. Accordingly, C4.5 rules can be used to improve the engineering problem.

  6. Isolation of dimorphic chloroplasts from the single-cell C4 species Bienertia sinuspersici

    Directory of Open Access Journals (Sweden)

    Lung Shiu-Cheung

    2012-03-01

    Full Text Available Abstract Three terrestrial plants are known to perform C4 photosynthesis without the dual-cell system by partitioning two distinct types of chloroplasts in separate cytoplasmic compartments. We report herein a protocol for isolating the dimorphic chloroplasts from Bienertia sinuspersici. Hypo-osmotically lysed protoplasts under our defined conditions released intact compartments containing the central chloroplasts and intact vacuoles with adhering peripheral chloroplasts. Following Percoll step gradient purification both chloroplast preparations demonstrated high homogeneities as evaluated from the relative abundance of respective protein markers. This protocol will open novel research directions toward understanding the mechanism of single-cell C4 photosynthesis.

  7. The C4 clustering algorithm: Clusters of galaxies in the Sloan Digital Sky Survey

    Energy Technology Data Exchange (ETDEWEB)

    Miller, Christopher J.; Nichol, Robert; Reichart, Dan; Wechsler, Risa H.; Evrard, August; Annis, James; McKay, Timothy; Bahcall, Neta; Bernardi, Mariangela; Boehringer,; Connolly, Andrew; Goto, Tomo; Kniazev, Alexie; Lamb, Donald; Postman, Marc; Schneider, Donald; Sheth, Ravi; Voges, Wolfgang; /Cerro-Tololo InterAmerican Obs. /Portsmouth U.,

    2005-03-01

    We present the ''C4 Cluster Catalog'', a new sample of 748 clusters of galaxies identified in the spectroscopic sample of the Second Data Release (DR2) of the Sloan Digital Sky Survey (SDSS). The C4 cluster-finding algorithm identifies clusters as overdensities in a seven-dimensional position and color space, thus minimizing projection effects that have plagued previous optical cluster selection. The present C4 catalog covers {approx}2600 square degrees of sky and ranges in redshift from z = 0.02 to z = 0.17. The mean cluster membership is 36 galaxies (with redshifts) brighter than r = 17.7, but the catalog includes a range of systems, from groups containing 10 members to massive clusters with over 200 cluster members with redshifts. The catalog provides a large number of measured cluster properties including sky location, mean redshift, galaxy membership, summed r-band optical luminosity (L{sub r}), velocity dispersion, as well as quantitative measures of substructure and the surrounding large-scale environment. We use new, multi-color mock SDSS galaxy catalogs, empirically constructed from the {Lambda}CDM Hubble Volume (HV) Sky Survey output, to investigate the sensitivity of the C4 catalog to the various algorithm parameters (detection threshold, choice of passbands and search aperture), as well as to quantify the purity and completeness of the C4 cluster catalog. These mock catalogs indicate that the C4 catalog is {approx_equal}90% complete and 95% pure above M{sub 200} = 1 x 10{sup 14} h{sup -1}M{sub {circle_dot}} and within 0.03 {le} z {le} 0.12. Using the SDSS DR2 data, we show that the C4 algorithm finds 98% of X-ray identified clusters and 90% of Abell clusters within 0.03 {le} z {le} 0.12. Using the mock galaxy catalogs and the full HV dark matter simulations, we show that the L{sub r} of a cluster is a more robust estimator of the halo mass (M{sub 200}) than the galaxy line-of-sight velocity dispersion or the richness of the cluster

  8. A study of immunoglobulins and complements (C3 &C4 in alopecia areata

    Directory of Open Access Journals (Sweden)

    Sharma R

    1995-01-01

    Full Text Available Estimation of serum Immunoglobulins (IgG, IgM and IgA and complements (C3 and C4 was carried out in 100 cases of alopecia areata as per method described by Mancini (1965.[1] Clinically patients were divided in two groups, alopecia areata circumscribed (group I and severe alopecia areata (group II. Significant decrease in levels of one or more Immunoglobulins were observed in most of the patients. However, Serum complements (C3 and C4 were within range of normal control values

  9. C# 4, ASP.NET 4, and WPF, with Visual Studio 2010 jump start

    CERN Document Server

    Nagel, Christian; Stephens, Rod; Hanselman, Scott; Glynn, Jay; Rader, Devin; Watson, Karli; Skinner, Morgan

    2010-01-01

    This Wrox Blox is a value-packed resource to help experienced .NETdevelopers learn the new .NET release. It is excerpted from theWrox books: Professional C# 4 and .NET 4, Professional ASP.NET4, and WPF Programmer's Reference by Christian Nagel,Bill Evjen, Scott Hanselman, and Rod Stephens, and includes morethan 100 print book pages drawn from these three key titles. It isan excellent resource to help .NET developers get up to speed faston .NET 4, C# 4.0, ASP.NET 4, and WPF, providing all theinformation needed to program with the important new features,including: C# Dynamic Types and Par

  10. Dynamic and quasi-static measurements of C-4 and primasheet P1000 explosives

    Energy Technology Data Exchange (ETDEWEB)

    Brown, Geoffrey W [Los Alamos National Laboratory; Thompson, Darla G [Los Alamos National Laboratory; De Luca, Racci [Los Alamos National Laboratory; Rae, Philip J [Los Alamos National Laboratory; Cady, Carl M [Los Alamos National Laboratory; Todd, Steven N [SNL

    2010-01-01

    We have measured dynamic and quasi-static mechanical properties of C-4 and Primasheet P1000 explosive materials to provide input data for modeling efforts. Primasheet P1000 is a pentaerythritol tetranitrate-based rubberized explosive. C-4 is a RDX-based moldable explosive. Dynamic measurements included acoustic and split-Hopkinson pressure bar tests. Quasi-static testing was done in compression on load frames and on a dynamic mechanical analyzer. Split-Hopkinson and quasi-static tests were done at five temperatures from -50 C to 50 C. Acoustic velocities were measured at, above, and below room temperature.

  11. Characterisation of antioxidants in photosynthetic and non-photosynthetic leaf tissues of variegated Pelargonium zonale plants.

    Science.gov (United States)

    Vidović, M; Morina, F; Milić-Komić, S; Vuleta, A; Zechmann, B; Prokić, Lj; Veljović Jovanović, S

    2016-07-01

    Hydrogen peroxide is an important signalling molecule, involved in regulation of numerous metabolic processes in plants. The most important sources of H2 O2 in photosynthetically active cells are chloroplasts and peroxisomes. Here we employed variegated Pelargonium zonale to characterise and compare enzymatic and non-enzymatic components of the antioxidative system in autotrophic and heterotrophic leaf tissues at (sub)cellular level under optimal growth conditions. The results revealed that both leaf tissues had specific strategies to regulate H2 O2 levels. In photosynthetic cells, the redox regulatory system was based on ascorbate, and on the activities of thylakoid-bound ascorbate peroxidase (tAPX) and catalase. In this leaf tissue, ascorbate was predominantly localised in the nucleus, peroxisomes, plastids and mitochondria. On the other hand, non-photosynthetic cells contained higher glutathione content, mostly located in mitochondria. The enzymatic antioxidative system in non-photosynthetic cells relied on the ascorbate-glutathione cycle and both Mn and Cu/Zn superoxide dismutase. Interestingly, higher content of ascorbate and glutathione, and higher activities of APX in the cytosol of non-photosynthetic leaf cells compared to the photosynthetic ones, suggest the importance of this compartment in H2 O2 regulation. Together, these results imply different regulation of processes linked with H2 O2 signalling at subcellular level. Thus, we propose green-white variegated leaves as an excellent system for examination of redox signal transduction and redox communication between two cell types, autotrophic and heterotrophic, within the same organ. PMID:26712503

  12. Mesophyll cells of C4 plants have fewer chloroplasts than those of closely related C3 plants.

    Science.gov (United States)

    Stata, Matt; Sage, Tammy L; Rennie, Troy D; Khoshravesh, Roxana; Sultmanis, Stefanie; Khaikin, Yannay; Ludwig, Martha; Sage, Rowan F

    2014-11-01

    The evolution of C(4) photosynthesis from C(3) ancestors eliminates ribulose bisphosphate carboxylation in the mesophyll (M) cell chloroplast while activating phosphoenolpyruvate (PEP) carboxylation in the cytosol. These changes may lead to fewer chloroplasts and different chloroplast positioning within M cells. To evaluate these possibilities, we compared chloroplast number, size and position in M cells of closely related C(3), C(3) -C(4) intermediate and C(4) species from 12 lineages of C(4) evolution. All C(3) species had more chloroplasts per M cell area than their C(4) relatives in high-light growth conditions. C(3) species also had higher chloroplast coverage of the M cell periphery than C(4) species, particularly opposite intercellular air spaces. In M cells from 10 of the 12 C(4) lineages, a greater fraction of the chloroplast envelope was pulled away from the plasmalemma in the C(4) species than their C(3) relatives. C(3) -C(4) intermediate species generally exhibited similar patterns as their C(3) relatives. We interpret these results to reflect adaptive shifts that facilitate efficient C(4) function by enhancing diffusive access to the site of primary carbon fixation in the cytosol. Fewer chloroplasts in C(4) M cells would also reduce shading of the bundle sheath chloroplasts, which also generate energy required by C(4) photosynthesis.

  13. Evidence for linkage between the loci coding for the binding protein for the fourth component of human complement (C4BP) and for the C3b/C4b receptor.

    OpenAIRE

    Rodriguez de Cordoba, S; Dykman, T R; Ginsberg-Fellner, F; Ercilla, G; Aqua, M; Atkinson, J P; Rubinstein, P

    1984-01-01

    Three pedigrees informative for the segregation of genetic variants of the binding protein for the fourth component of complement (C4BP) and C3b/C4b receptor (C3bR) have been identified. There were 10 informative meioses with no recombinants, indicating a close linkage between the loci encoding C4BP and C3bR, C4BP and C3bR [maximum lod (logarithm of odds of linkage) score: 2.4 at recombinant fraction = 0.0]. In addition, in the four unrelated individuals who were doubly heterozygous (C4BP*1, ...

  14. 关于Stn∪ I=1 mi-C4的优美性%On the Gracefulness of Graph St∪n i=1 mi-C4

    Institute of Scientific and Technical Information of China (English)

    李长春; 韩兆红; 张国阳

    2007-01-01

    本文就星形树与m-C4并图的优美性进行探讨,证明了当m≥2这类图StpUm-C4是优美图.并对星形树St与n∪ i=1 mi-C4并图Stn∪ i=1 mi-C4的优美性进行探讨.证明了当max mi≥3 i=1,2…,n这类图Stn∪ i=1 mi-C4是优美图.

  15. Biochemical Characterization of the C-4-Dicarboxylate Transporter DctA from Bacillus subtilis

    NARCIS (Netherlands)

    Groeneveld, Maarten; Weme, Ruud G. J. Detert Oude; Duurkens, Ria H.; Slotboom, Dirk Jan

    2010-01-01

    Bacterial secondary transporters of the DctA family mediate ion-coupled uptake of C-4-dicarboxylates. Here, we have expressed the DctA homologue from Bacillus subtilis in the Gram-positive bacterium Lactococcus lactis. Transport of dicarboxylates in vitro in isolated membrane vesicles was assayed. W

  16. Evaluating Defense Architecture Frameworks for C4I System Using Analytic Hierarchy Process

    Directory of Open Access Journals (Sweden)

    Abdullah S. Alghamdi

    2009-01-01

    Full Text Available Problem statement: The Command, Control, Communications, Computers and Intelligence (C4I Systems provided situational awareness about operational environment and supported in decision making and directed to operative environment. These systems had been used by various agencies like defense, police, investigation, road, rail, airports, oil and gas related department. However, the increase use of C4I system had made it more important and attractive. Consequently interest in design and development of C4I system had increased among the researchers. Many defense industry frameworks were available but the problem was a suitable selection of a framework in design and development of C4I system. Approach: This study described the concepts, tool and methodology being used for evaluation analysis of different frameworks by Analytic Hierarchy Process (AHP. Results: We had compared different defense industry frameworks like Department of Defense Architecture Framework (DODAF, Ministry of Defense Architecture Framework (MODAF and NATO Architecture Framework (NAF and found that AHP is fairly good tool in terms of analysis. Conclusion: Different defense industry frameworks such as DODAF, MODAF and NAF had been evaluated and compared using AHP.

  17. Can chilling tolerance of C4 photosynthesis in Miscanthus be transferred to sugarcane?

    Science.gov (United States)

    The goal of this study was to investigate if chilling tolerance of C4 photosynthesis in Miscanthus can be transferred to sugarcane. Net leaf CO2 uptake (Asat) and the maximum operating efficiency of photosystem II ('PSII) were measured in warm conditions (25 °C/20 °C), and then during and following ...

  18. Mild and rational synthesis of palladium complexes comprising C(4)-bound N-heterocyclic carbenes

    OpenAIRE

    Kluser, Evelyne; Neels, Antonia; Albrecht, Martin

    2007-01-01

    Oxidative addition of pyridyl-functionalised 4-iodoimidazolium salts to palladium(0) gives catalytically active complexes in which the N-heterocyclic carbene is bound to the palladium(II) centre in a non-classical bonding mode via C(4).

  19. C4N2 ice in Titan’s atmosphere: reality or myth?

    Science.gov (United States)

    Anderson, Carrie; Samuelson, Robert E.; Achterberg, Richard K.; Flasar, F. M.

    2014-11-01

    Voyager 1 IRIS detected a spectral emission feature at 478 cm-1 in Titan’s atmosphere at high northern latitudes. Now one Titan year later we rediscovered it in Cassini CIRS limb spectra at 70°N. Thus far the feature has always been associated with the lower polar stratosphere during early northern spring. No known trace organic vapor in Titan’s atmosphere has a spectral feature at 478 cm-1, and the only known or suspected condensate that does is C4N2 ice. However, the C4N2 ν8 and ν9 vapor features at 472 cm-1 and 108 cm-1, respectively, have never been observed in Titan’s atmosphere, leading to a C4N2 vapor upper limit at least 2 orders of magnitude lower than equilibrium with the ice phase would suggest. In this study we analyze the spectral shapes and strengths of the 478 cm-1 feature in the IRIS and CIRS data sets in an effort to determine particle sizes, mole fractions, and vertical distributions of the putative condensate cloud responsible for the feature, and then discuss the pros and cons of its identify with C4N2 ice.

  20. Aerobic growth of campylobacter in media supplemented with C3-monocarboxylates and C4-dicarboxylates

    Science.gov (United States)

    Experiments were conducted to examine aerobic growth of Campylobacter spp. in media supplemented with C4-dicarboxylates (fumarate, succinate, or malate) and C3-monocarboxylates (pyruvate or lactate). Basal broth media composed of tryptose, yeast extract, and a mineral-vitamin solution was supplement...

  1. Promotor polymorphisms in leukotriene C4 synthase and risk of ischemic cerebrovascular disease

    DEFF Research Database (Denmark)

    Freiberg, J.J.; Tybjaerg-Hansen, A.; Sillesen, H.;

    2008-01-01

    OBJECTIVE: Cysteinyl leukotrienes are involved in inflammation and possibly in early carotid atherosclerosis. We tested the hypothesis that the -444 A/C and -1072 G/A polymorphisms of the leukotriene C(4) synthase associate with risk of ischemic cerebrovascular disease. METHODS AND RESULTS: We ge...

  2. C4.4A as a biomarker in pulmonary adenocarcinoma and squamous cell carcinoma

    DEFF Research Database (Denmark)

    Jacobsen, Benedikte; Kriegbaum, Mette Camilla; Santoni-Rugiu, Eric;

    2014-01-01

    The high prevalence and mortality of lung cancer, together with a poor 5-year survival of only approximately 15%, emphasize the need for prognostic and predictive factors to improve patient treatment. C4.4A, a member of the Ly6/uPAR family of membrane proteins, qualifies as such a potential...

  3. Deuterium contents in water of various tissues from different subtypes of C4 plants

    International Nuclear Information System (INIS)

    The work summarized here is concerned with the use of deuterium in evaluating the position of the NADP-malate enzyme subtype in the C4 plant maize (Zea mays). The results show a higher deuterium concentration in the biomass, resulting from the use in the Calvin cycle of intercostal water enriched in deuterium by evapotranspiration. 2 refs, 1 tab

  4. Electron transfer patterns of the di-heme protein cytochrome c(4) from Pseudomonas stutzeri

    DEFF Research Database (Denmark)

    Raffalt, Anders Christer; Schmidt, L.; Christensen, Hans Erik Mølager;

    2009-01-01

    We report kinetic data for the two-step electron transfer (ET) oxidation and reduction of the two-domain di-heme redox protein Pseudomonas stutzeri cytochrome (cyt) c(4) by [Co(bipy)(3)](2- 3-) (bipy = 2,2'-bipyridine). Following earlier reports, the data accord with both bi- and tri-exponential ...

  5. Anticancer effects of oligomeric proanthocyanidins on human colorectal cancer cell line, SNU-C4

    OpenAIRE

    Kim, Youn-Jung; Park, Hae-Jeong; Yoon, Seo-Hyun; Kim, Mi-Ja; Leem, Kang-hyun; Chung, Joo-Ho; Kim, Hye-Kyung

    2005-01-01

    AIM: Oligomeric proanthocyanidins (OPC), natural polyphenolic compounds found in plants, are known to have antioxidant and anti-cancer effects. We investigated whether the anti-cancer effects of the OPC are induced by apoptosis on human colorectal cancer cell line, SNU-C4.

  6. Search for anions in molecular sources: C4H- detection in L1527

    CERN Document Server

    Agundez, M; Guélin, M; Gerin, M; McCarthy, M C; Thaddeus, P

    2007-01-01

    We present the results of a search for the negative ion C4H- in various dark clouds, low mass star-forming regions and photon-dominated regions (PDRs). We have also searched for C6H-, C2H- and CN- in some of the sources. The millimeter-wave observations were carried out with the IRAM-30m telescope. We detect C4H-, through the J = 9-8 and J = 10-9 rotational transitions, in the low mass star-forming region L1527. We thus confirm the tentative detection of the J = 9-8 line recently reported toward this source. The [C4H-]/[C4H] ratio found is 0.011 %, which is slightly lower than the value observed in IRC +10216, 0.024 %, but above the 3 sigma upper limit we derive in TMC-1, < 0.0052 %. We have also derived an upper limit for the [C6H-]/[C6H] ratio in the Horsehead Nebula, and for various anion-to-neutral ratios in the observed sources. These results are compared with recent chemical models.

  7. Growth Properties and Biomass Production in the Hybrid C4 Crop Sorghum bicolor.

    Science.gov (United States)

    Tazoe, Youshi; Sazuka, Takashi; Yamaguchi, Miki; Saito, Chieko; Ikeuchi, Masahiro; Kanno, Keiichi; Kojima, Soichi; Hirano, Ko; Kitano, Hideki; Kasuga, Shigemitsu; Endo, Tsuyoshi; Fukuda, Hiroo; Makino, Amane

    2016-05-01

    Hybrid vigor (heterosis) has been used as a breeding technique for crop improvement to achieve enhanced biomass production, but the physiological mechanisms underlying heterosis remain poorly understood. In this study, to find a clue to the enhancement of biomass production by heterosis, we systemically evaluated the effect of heterosis on the growth rate and photosynthetic efficiency in sorghum hybrid [Sorghum bicolor (L.) Moench cv. Tentaka] and its parental lines (restorer line and maintainer line). The final biomass of Tentaka was 10-14 times greater than that of the parental lines grown in an experimental field, but the relative growth rate during the vegetative growth stage did not differ. Tentaka exhibited a relatively enlarged leaf area with lower leaf nitrogen content per leaf area (Narea). When the plants were grown hydroponically at different N levels, daily CO2 assimilation per leaf area (A) increased with Narea, and the ratio of A to Narea (N-use efficiency) was higher in the plants grown at low N levels but not different between Tentaka and the parental lines. The relationships between the CO2 assimilation rate, the amounts of photosynthetic enzymes, including ribulose-1,5-bisphosphate carboxylase/oxygenase, phosphoenolpyruvate carboxylase and pyruvate phosphate dikinase, Chl and Narea did not differ between Tentaka and the parental lines. Thus, Tentaka tended to exhibit enlargement of leaf area with lower N content, leading to a higher N-use efficiency for CO2 assimilation, but the photosynthetic properties did not differ. The greater biomass in Tentaka was mainly due to the prolonged vegetative growth period. PMID:26508521

  8. Expression of the intact C4 type pepc gene cloned from maize in transgenic winter wheat

    Institute of Scientific and Technical Information of China (English)

    CHEN Xuqing; ZHANG Xiaodong; LIANG Rongqi; ZHANG Liquan; YANG Fengping; CAO Mingqing

    2004-01-01

    Maize intact C4-pepc gene was amplified through LA-PCR and successfully sub-cloned into modified vector pGreen0029 to form a stable expression construct named as Pbac214 (12 kb), which contains CaMV 35S promoter driven bar gene as selection marker. Comparing the cloned DNA sequences (6.7 kb) with published maize C4-pepc gene (GenBank accession E17154) sequences, the identity of DNA sequence alignment is 98.96%. There are only 49 differences between these two intact DNA sequences, of which 13 occur in the region of promoter, 18 in introns, and 18 in exons. The homology of Mrna sequence alignment is 99.38%, and the putative amino acids sequence identity is 99.38%. There are only 15 differences between these two Mrna, and these differences bring 4 sites mutant on the putative amino acids of PEPC protein. Through biolistic bombardment of PDS1000/He system, expression vector Pbac214 has been transformed into winter wheat. Southern blotting results show that the intact C4-pepc gene has been integrated into genome of winter wheat. SDS-PAGE analysis of leaf soluble protein in transgenic wheat showed that the intact C4-pepc gene was well transcribed, spliced and translated as in maize. The enzyme activity of leaf PEPC in transgenic wheat has been detected. The activities of leaf PEPC increased over 3-5 times in some transgenic plants. The data of photosynthesis rate and transpiration rate of transgenic wheat flag leaves showed that the C4-pepc gene can increase the photosynthesis rate and transpiration rate of transgenic wheat.

  9. Eliminating false positive C4 sugar tests on New Zealand Manuka honey.

    Science.gov (United States)

    Rogers, Karyne M; Somerton, Kerry; Rogers, Pamela; Cox, Julie

    2010-08-30

    Carbon isotope analyses (delta(13)C) of some New Zealand Manuka honeys show that they often fail the internationally recognised Association of Official Analytical Chemists sugar test (AOAC method 998.12) which detects added C(4) sugar, although these honeys are from unadulterated sources. Failure of these high value products is detrimental to the New Zealand honey industry, not only in lost export revenue, but also in brand and market reputation damage. The standard AOAC test compares the carbon isotope value of the whole honey and corresponding protein isolated from the same honey. Differences between whole honey and protein delta(13)C values should not be greater than +1.0 per thousand, as it indicates the possibility of adulteration with syrups or sugars from C(4) plants such as high fructose corn syrup or cane sugar.We have determined that during the standard AOAC method, pollen and other insoluble components are isolated with the flocculated protein. These non-protein components have isotope values which are considerably different from those of the pure protein, and can shift the apparent delta(13)C value of protein further away from the delta(13)C value of the whole honey, giving a false positive result for added C(4) sugar. To eliminate a false positive C(4) sugar test for Manuka honey, prior removal of pollen and other insoluble material from the honey is necessary to ensure that only the pure protein is isolated. This will enable a true comparison between whole honey and protein delta(13)C isotopes. Furthermore, we strongly suggest this modification to the AOAC method be universally adopted for all honey C(4) sugar tests.

  10. Eliminating false positive C4 sugar tests on New Zealand Manuka honey.

    Science.gov (United States)

    Rogers, Karyne M; Somerton, Kerry; Rogers, Pamela; Cox, Julie

    2010-08-30

    Carbon isotope analyses (delta(13)C) of some New Zealand Manuka honeys show that they often fail the internationally recognised Association of Official Analytical Chemists sugar test (AOAC method 998.12) which detects added C(4) sugar, although these honeys are from unadulterated sources. Failure of these high value products is detrimental to the New Zealand honey industry, not only in lost export revenue, but also in brand and market reputation damage. The standard AOAC test compares the carbon isotope value of the whole honey and corresponding protein isolated from the same honey. Differences between whole honey and protein delta(13)C values should not be greater than +1.0 per thousand, as it indicates the possibility of adulteration with syrups or sugars from C(4) plants such as high fructose corn syrup or cane sugar.We have determined that during the standard AOAC method, pollen and other insoluble components are isolated with the flocculated protein. These non-protein components have isotope values which are considerably different from those of the pure protein, and can shift the apparent delta(13)C value of protein further away from the delta(13)C value of the whole honey, giving a false positive result for added C(4) sugar. To eliminate a false positive C(4) sugar test for Manuka honey, prior removal of pollen and other insoluble material from the honey is necessary to ensure that only the pure protein is isolated. This will enable a true comparison between whole honey and protein delta(13)C isotopes. Furthermore, we strongly suggest this modification to the AOAC method be universally adopted for all honey C(4) sugar tests. PMID:20635333

  11. Angiosperm n-alkane distribution patterns and the geologic record of C4 grassland evolution

    Science.gov (United States)

    Henderson, A.; Graham, H. V.; Patzkowsky, M.; Fox, D. L.; Freeman, K. H.

    2012-12-01

    n-Alkane average chain-length (ACL) patterns vary regionally with community composition and climate. To clarify the influence of phylogenetic and community patterns, we compiled and analyzed a global database of published n-alkane abundance for n-C27 to C35 homologs in modern plant specimens (n=205). ACL for waxes in C4 non-woody plants are longer than for woody plants, suggesting ACL can serve as an indicator of the three-dimensional structure of local vegetation. Further, these findings suggest compound-specific isotopic data for longer alkane homologs (C31, C33, C35) will proportionately represent non-woody vegetation and isotope measurements of C29 are more representative of woody vegetation. Thus, the combination of ACL and carbon isotope compositions should allow us to disentangle C3 woody, C3 non-woody, and C4 non-woody signals in terrestrial paleorecords. Application of this approach to the geologic record of Miocene C4 grassland expansion in the US Great Plains and the Siwaliks in Pakistan illustrate two very different transition scenarios. Alkane-specific isotopic data indicate C4 grasslands appeared 2.5 Ma in the Great Plains and 6.5 Ma in the Siwaliks, and ACL analysis indicates that this transition involved the replacement of woody vegetation in the US and the replacement of C3 grasses in Pakistan. Our analysis illustrates that, consistent with differences in the timing of C4 grassland, the drivers of change were likely not the same in these regions. Oxygen isotope records suggest that the more recent transition in the Great Plains was associated with climate cooling and possibly changes in disturbance regimes and that the transition in the Siwaliks was likely associated with warming and drying.

  12. Multiscale Analysis and Optimisation of Photosynthetic Solar Energy Systems

    CERN Document Server

    Ringsmuth, Andrew K

    2014-01-01

    This work asks how light harvesting in photosynthetic systems can be optimised for economically scalable, sustainable energy production. Hierarchy theory is introduced as a system-analysis and optimisation tool better able to handle multiscale, multiprocess complexities in photosynthetic energetics compared with standard linear-process analysis. Within this framework, new insights are given into relationships between composition, structure and energetics at the scale of the thylakoid membrane, and also into how components at different scales cooperate under functional objectives of the whole photosynthetic system. Combining these reductionistic and holistic analyses creates a platform for modelling multiscale-optimal, idealised photosynthetic systems in silico.

  13. 哈氏合金C4材料焊接工艺%Research on Welding Process of Hastelloy C4

    Institute of Scientific and Technical Information of China (English)

    赵瑞辉

    2014-01-01

    To prevent from the corrosion of the medium,hastelloy C4 material belonging nickel -based corrosion resistant alloy of Ni-Cr-Mo type with single-phase austenite was selected and adapt as the bottom of residual liquid tanks.With TIG welding method and ERNiCrMo -7 welding filler,the tech-niques were adapt such as groove design,pre-weld cleaning,temperature control between channels and lower welding heat.welding procedure qualification test has been passed and the metallographic micro-structures analysis of welded joints were conducted.The results show that the welding process can ensure the mechanical properties and corrosion resistance of welded joints.%为防止介质腐蚀,残液罐产品底部选用了哈氏合金C4材料,该材料属于Ni-Cr-Mo类型镍基耐蚀合金、单相奥氏体组织,具有镍基耐蚀合金的焊接特性。采用氩弧焊方法,选用ERNiCrMo-7焊丝,通过设计坡口、焊前清理、控制道间温度、选择较小焊接热输入等工艺措施,经焊接工艺评定试验和焊接接头金相组织分析,结果表明所制定的焊接工艺可以保证焊接接头的力学性能和耐蚀性能。

  14. Epitaxial Stabilization between Intermetallic and Carbide Domains in the Structures of Mn16SiC4 and Mn17Si2C4.

    Science.gov (United States)

    Fredrickson, Rie T; Guo, Yiming; Fredrickson, Daniel C

    2016-01-13

    The concept of frustration between competing geometrical or bonding motifs is frequently evoked in explaining complex phenomena in the structures and properties of materials. This idea is of particular importance for metallic systems, where frustration forms the basis for the design of metallic glasses, a source of diverse magnetic phenomena, and a rationale for the existence of intermetallics with giant unit cells containing thousands of atoms. Unlike soft materials, however, where conflicts can be synthetically encoded in the molecular structure, staging frustration in the metallic state is challenging due to the ease of macroscopic segregation of incompatible components. In this Article, we illustrate one approach for inducing the intergrowth of incompatible bonding motifs with the synthesis and characterization of two new intermetallic carbides: Mn16SiC4 (mC42) and Mn17Si2C4 (mP46). Similar to the phases Mn5SiC and Mn8Si2C in the Mn-Si-C system, these compounds appear as intergrowths of Mn3C and tetrahedrally close-packed (TCP) regions reminiscent of Mn-rich Mn-Si phases. The nearly complete spatial segregation of Mn-Si (intermetallic) and Mn-C (carbide) interactions in these structures can be understood from the differing geometrical requirements of C and Si. Rather than macroscopically separating into distinct phases, though, the two bonding types are tightly interwoven, with most Mn atoms being on the interfaces. DFT chemical pressure analysis reveals a driving force stabilizing these interfaces: the major local pressures acting between the Mn atoms in the Mn-Si and Mn-C systems are of opposite signs. Joining the intermetallic and carbide domains together then provides substantial relief to these local pressures, an effect we term epitaxial stabilization.

  15. Engineering cyanobacteria as photosynthetic feedstock factories.

    Science.gov (United States)

    Hays, Stephanie G; Ducat, Daniel C

    2015-03-01

    Carbohydrate feedstocks are at the root of bioindustrial production and are needed in greater quantities than ever due to increased prioritization of renewable fuels with reduced carbon footprints. Cyanobacteria possess a number of features that make them well suited as an alternative feedstock crop in comparison to traditional terrestrial plant species. Recent advances in genetic engineering, as well as promising preliminary investigations of cyanobacteria in a number of distinct production regimes have illustrated the potential of these aquatic phototrophs as biosynthetic chassis. Further improvements in strain productivities and design, along with enhanced understanding of photosynthetic metabolism in cyanobacteria may pave the way to translate cyanobacterial theoretical potential into realized application.

  16. Microspectroscopy of the photosynthetic compartment of algae.

    Science.gov (United States)

    Evangelista, Valtere; Frassanito, Anna Maria; Passarelli, Vincenzo; Barsanti, Laura; Gualtieri, Paolo

    2006-01-01

    We performed microspectroscopic evaluation of the pigment composition of the photosynthetic compartments of algae belonging to different taxonomic divisions and higher plants. The feasibility of microspectroscopy for discriminating among species and/or phylogenetic groups was tested on laboratory cultures. Gaussian bands decompositions and a fitting algorithm, together with fourth-derivative transformation of absorbance spectra, provided a reliable discrimination among chlorophylls a, b and c, phycobiliproteins and carotenoids. Comparative analysis of absorption spectra highlighted the evolutionary grouping of the algae into three main lineages in accordance with the most recent endosymbiotic theories.

  17. Photosynthetic water oxidation: insights from manganese model chemistry.

    Science.gov (United States)

    Young, Karin J; Brennan, Bradley J; Tagore, Ranitendranath; Brudvig, Gary W

    2015-03-17

    Catalysts for light-driven water oxidation are a critical component for development of solar fuels technology. The multielectron redox chemistry required for this process has been successfully deployed on a global scale in natural photosynthesis by green plants and cyanobacteria using photosystem II (PSII). PSII employs a conserved, cuboidal Mn4CaOX cluster called the O2-evolving complex (OEC) that offers inspiration for artificial O2-evolution catalysts. In this Account, we describe our work on manganese model chemistry relevant to PSII, particularly the functional model [Mn(III/IV)2(terpy)2(μ-O)2(OH2)2](NO3)3 complex (terpy = 2,2';6',2″-terpyridine), a mixed-valent di-μ-oxo Mn dimer with two terminal aqua ligands. In the presence of oxo-donor oxidants such as HSO5(-), this complex evolves O2 by two pathways, one of which incorporates solvent water in an O-O bond-forming reaction. Deactivation pathways of this catalyst include comproportionation to form an inactive Mn(IV)Mn(IV) dimer and also degradation to MnO2, a consequence of ligand loss when the oxidation state of the complex is reduced to labile Mn(II) upon release of O2. The catalyst's versatility has been shown by its continued catalytic activity after direct binding to the semiconductor titanium dioxide. In addition, after binding to the surface of TiO2 via a chromophoric linker, the catalyst can be oxidized by a photoinduced electron-transfer mechanism, mimicking the natural PSII process. Model oxomanganese complexes have also aided in interpreting biophysical and computational studies on PSII. In particular, the μ-oxo exchange rates of the Mn-terpy dimer have been instrumental in establishing that the time scale for μ-oxo exchange of high-valent oxomanganese complexes with terminal water ligands is slower than O2 evolution in the natural photosynthetic system. Furthermore, computational studies on the Mn-terpy dimer and the OEC point to similar Mn(IV)-oxyl intermediates in the O-O bond

  18. Photosynthetic water oxidation: insights from manganese model chemistry.

    Science.gov (United States)

    Young, Karin J; Brennan, Bradley J; Tagore, Ranitendranath; Brudvig, Gary W

    2015-03-17

    Catalysts for light-driven water oxidation are a critical component for development of solar fuels technology. The multielectron redox chemistry required for this process has been successfully deployed on a global scale in natural photosynthesis by green plants and cyanobacteria using photosystem II (PSII). PSII employs a conserved, cuboidal Mn4CaOX cluster called the O2-evolving complex (OEC) that offers inspiration for artificial O2-evolution catalysts. In this Account, we describe our work on manganese model chemistry relevant to PSII, particularly the functional model [Mn(III/IV)2(terpy)2(μ-O)2(OH2)2](NO3)3 complex (terpy = 2,2';6',2″-terpyridine), a mixed-valent di-μ-oxo Mn dimer with two terminal aqua ligands. In the presence of oxo-donor oxidants such as HSO5(-), this complex evolves O2 by two pathways, one of which incorporates solvent water in an O-O bond-forming reaction. Deactivation pathways of this catalyst include comproportionation to form an inactive Mn(IV)Mn(IV) dimer and also degradation to MnO2, a consequence of ligand loss when the oxidation state of the complex is reduced to labile Mn(II) upon release of O2. The catalyst's versatility has been shown by its continued catalytic activity after direct binding to the semiconductor titanium dioxide. In addition, after binding to the surface of TiO2 via a chromophoric linker, the catalyst can be oxidized by a photoinduced electron-transfer mechanism, mimicking the natural PSII process. Model oxomanganese complexes have also aided in interpreting biophysical and computational studies on PSII. In particular, the μ-oxo exchange rates of the Mn-terpy dimer have been instrumental in establishing that the time scale for μ-oxo exchange of high-valent oxomanganese complexes with terminal water ligands is slower than O2 evolution in the natural photosynthetic system. Furthermore, computational studies on the Mn-terpy dimer and the OEC point to similar Mn(IV)-oxyl intermediates in the O-O bond

  19. C4.4A gene ablation is compatible with normal epidermal development and causes modest overt phenotypes

    Science.gov (United States)

    Kriegbaum, Mette Camilla; Jacobsen, Benedikte; Füchtbauer, Annette; Hansen, Gert Helge; Christensen, Ib Jarle; Rundsten, Carsten Friis; Persson, Morten; Engelholm, Lars Henning; Madsen, Andreas Nygaard; Di Meo, Ivano; Lund, Ida Katrine; Holst, Birgitte; Kjaer, Andreas; Lærum, Ole Didrik; Füchtbauer, Ernst-Martin; Ploug, Michael

    2016-01-01

    C4.4A is a modular glycolipid-anchored Ly6/uPAR/α-neurotoxin multidomain protein that exhibits a prominent membrane-associated expression in stratified squamous epithelia. C4.4A is also expressed in various solid cancer lesions, where high expression levels often are correlated to poor prognosis. Circumstantial evidence suggests a role for C4.4A in cell adhesion, migration, and invasion, but a well-defined biological function is currently unknown. In the present study, we have generated and characterized the first C4.4A-deficient mouse line to gain insight into the functional significance of C4.4A in normal physiology and cancer progression. The unchallenged C4.4A-deficient mice were viable, fertile, born in a normal Mendelian distribution and, surprisingly, displayed normal development of squamous epithelia. The C4.4A-deficient mice were, nonetheless, significantly lighter than littermate controls predominantly due to differences in fat mass. Congenital C4.4A deficiency delayed migration of keratinocytes enclosing incisional skin wounds in male mice. In chemically induced bladder carcinomas, C4.4A deficiency attenuated the incidence of invasive lesions despite having no effect on total tumour burden. This new C4.4A-deficient mouse line provides a useful platform for future studies on functional aspects of C4.4A in tumour cell invasion in vivo. PMID:27169360

  20. Clinical and pathological correlations of C4d immunostaining and its infl uence on the outcome of kidney transplant recipients

    Directory of Open Access Journals (Sweden)

    Virna Nowotny Carpio

    2011-09-01

    Full Text Available INTRODUCTION: C4d is a marker of antibody-mediated rejection (ABMR in kidney allografts, although cellular rejection also have C4d deposits. OBJECTIVE: To correlate C4d expression with clinico-pathological parameters and graft outcomes at three years. METHODS: One hundred forty six renal transplantation recipients with graft biopsies by indication were included. C4d staining was performed by paraffin-immunohistochemistry. Graft function and survival were measured, and predictive variables of the outcome were determined by multivariate Cox regression. RESULTS: C4d staining was detected in 48 (31% biopsies, of which 23 (14.7% had diffuse and 25 (16% focal distribution. Pre-transplantation panel reactive antibodies (%PRA class I and II were significantly higher in C4d positive patients as compared to those C4d negative. Both glomerulitis and pericapillaritis were associated to C4d (p = 0.002 and p < 0.001, respectively. The presence of C4d in biopsies diagnosed as no rejection (NR, acute cellular rejection (ACR or interstitial fibrosis/ tubular atrophy (IF/TA did not impact graft function or survival. Compared to NR, ACR and IF/TA C4d-, patients with ABMR C4d+ had the worst graft survival over 3 years (p = 0.034, but there was no difference between ABMR versus NR, ACR and IF/TA that were C4d positive (p = 0.10. In Cox regression, graft function at biopsy and high %PRA levels were predictors of graft loss. CONCLUSIONS: This study confirmed that C4d staining in kidney graft biopsies is a clinically useful marker of ABMR, with well defined clinical and pathological correlations. The impact of C4d deposition in other histologic diagnoses deserves further investigation.

  1. Improved photosynthetic performance during severe drought in Nicotiana tabacum overexpressing a nonenergy conserving respiratory electron sink.

    Science.gov (United States)

    Dahal, Keshav; Martyn, Greg D; Vanlerberghe, Greg C

    2015-10-01

    Chloroplasts have means to manage excess reducing power but these mechanisms may become restricted by rates of ATP turnover. Alternative oxidase (AOX) is a mitochondrial terminal oxidase that uncouples the consumption of reducing power from ATP synthesis. Physiological and biochemical analyses were used to compare respiration and photosynthesis of Nicotiana tabacum wild-type (WT) plants with that of transgenic lines overexpressing AOX, under both well-watered and drought stress conditions. With increasing drought severity, AOX overexpression acted to increase respiration in the light (RL ) relative to WT. CO2 and light response curves indicated that overexpression also improved photosynthetic performance relative to WT, as drought severity increased. This was not due to an effect of AOX amount on leaf water status or the development of the diffusive limitations that occur due to drought. Rather, AOX overexpression dampened photosystem stoichiometry adjustments and losses of key photosynthetic components that occurred in WT. The results indicate that AOX amount influences RL , particularly during severe drought, when cytochrome pathway respiration may become increasingly restricted. This impacts the chloroplast redox state, influencing how the photosynthetic apparatus responds to increasing drought severity. In particular, the development of biochemical limitations to photosynthesis are dampened in plants with increased nonenergy conserving RL . PMID:26032897

  2. Investigating the association between photosynthetic efficiency and generation of biophotoelectricity in autotrophic microbial fuel cells

    Science.gov (United States)

    Ciniciato, Gustavo P. M. K.; Ng, Fong-Lee; Phang, Siew-Moi; Jaafar, Muhammad Musoddiq; Fisher, Adrian C.; Yunus, Kamran; Periasamy, Vengadesh

    2016-01-01

    Microbial fuel cells operating with autotrophic microorganisms are known as biophotovoltaic devices. It represents a great opportunity for environmentally-friendly power generation using the energy of the sunlight. The efficiency of electricity generation in this novel system is however low. This is partially reflected by the poor understanding of the bioelectrochemical mechanisms behind the electron transfer from these microorganisms to the electrode surface. In this work, we propose a combination of electrochemical and fluorescence techniques, giving emphasis to the pulse amplitude modulation fluorescence. The combination of these two techniques allow us to obtain information that can assist in understanding the electrical response obtained from the generation of electricity through the intrinsic properties related to the photosynthetic efficiency that can be obtained from the fluorescence emitted. These were achieved quantitatively by means of observed changes in four photosynthetic parameters with the bioanode generating electricity. These are the maximum quantum yield (Fv/Fm), alpha (α), light saturation coefficient (Ek) and maximum rate of electron transfer (rETRm). The relationship between the increases in the current density collected by the bioanode to the decrease of the rETRm values in the photosynthetic pathway for the two microorganisms was also discussed. PMID:27502051

  3. A new perspective on hydrogen production by photosynthetic water-splitting

    Energy Technology Data Exchange (ETDEWEB)

    Lee, J.W.; Greenbaum, E.

    1996-05-01

    Present energy systems are heavily dependent on fossil fuels. This will eventually lead to the foreseeable depletion of fossil energy resources and, according to some reports, global climate changes due to the emission of carbon dioxide. In principle, hydrogen production by biophotolysis of water can be an ideal solar energy conversion system for sustainable development of human activities in harmony with the global environment. In photosynthetic hydrogen production research, there are currently two main efforts: (1) Direct photoevolution of hydrogen and oxygen by photosynthetic water splitting using the ferredoxin/hydrogenase pathway; (2) Dark hydrogen production by fermentation of organic reserves such as starch that are generated by photosynthesis during the light period. In this chapter, the advantages and challenges of the two approaches for hydrogen production will be discussed, in relation to a new opportunity brought by our recent discovery of a new photosynthetic water-splitting reaction which, potentially, has twice the energy efficiency of conventional watersplitting via the two light reaction Z-scheme of photosynthesis.

  4. Path of carbon flow during NO3--induced photosynthetic suppression in N-limited Selenastrum minutum

    International Nuclear Information System (INIS)

    Nitrate addition to nitrate-limited cultures of Selenastrum minutum Naeg. Collins (Chlorophyta) resulted in a 70% suppression of photosynthetic carbon fixation. In 14CO2 pulse/chase experiments nitrate resupply increased radiolabel incorporation into amino and organic acids and decreased radiolabel incorporation into insoluble material. Nitrate resupply increased the concentration of phosphoenolpyruvate and increased the radiolabeling of phosphoenolpyruvate, pyruvate and tricarboxylic acid cycle intermediates, notably citrate, fumarate, and malate. Furthermore, nitrate also increased the pool sizes and radiolabeling of most amino acids, with alanine, aspartate, glutamate, and glutamine showing the largest changes. Nitrate resupply increased the proportion of radiolabel in the C-4 position of malate and increased the ratios of radiolabel in aspartate to phosphoenolpyruvate and in pyruvate to phosphoenolpyruvate, indicative of increased phosphoenolpyruvate carboxylase and pyruvate kinase activities. Analysis of these data showed that the rate of carbon flow through glutamate (10.6 μmoles glutamate per milligram chlorophyll per hour) and the rate of net glutamate production (7.9 μmoles glutamate per milligram chlorophyll per hour) were both greater than the maximum rate of carbon export from the Calvin cycle which could be maintained during steady state photosynthesis. These results are consistent with the hypothesis that nitrogen resupply to nitrogen-limited microalgae results in a transient suppression of photosynthetic carbon fixation due, in part, to the severity of competition for carbon skeletons between the Calvin cycle and nitrogen assimilation

  5. Thermal responses of Symbiodinium photosynthetic carbon assimilation

    Science.gov (United States)

    Oakley, Clinton A.; Schmidt, Gregory W.; Hopkinson, Brian M.

    2014-06-01

    The symbiosis between hermatypic corals and their dinoflagellate endosymbionts, genus Symbiodinium, is based on carbon exchange. This symbiosis is disrupted by thermally induced coral bleaching, a stress response in which the coral host expels its algal symbionts as they become physiologically impaired. The disruption of the dissolved inorganic carbon (DIC) supply or the thermal inactivation of Rubisco have been proposed as sites of initial thermal damage that leads to the bleaching response. Symbiodinium possesses a highly unusual Form II ribulose bisphosphate carboxylase/oxygenase (Rubisco), which exhibits a lower CO2:O2 specificity and may be more thermally unstable than the Form I Rubiscos of other algae and land plants. Components of the CO2 concentrating mechanism (CCM), which supplies inorganic carbon for photosynthesis, may also be temperature sensitive. Here, we examine the ability of four cultured Symbiodinium strains to acquire and fix DIC across a temperature gradient. Surprisingly, the half-saturation constant of photosynthesis with respect to DIC concentration ( K P), an index of CCM function, declined with increasing temperature in three of the four strains, indicating a greater potential for photosynthetic carbon acquisition at elevated temperatures. In the fourth strain, there was no effect of temperature on K P. Finding no evidence for thermal inhibition of the CCM, we conclude that CCM components are not likely to be the primary sites of thermal damage. Reduced photosynthetic quantum yields, a hallmark of thermal bleaching, were observed at low DIC concentrations, leaving open the possibility that reduced inorganic carbon availability is involved in bleaching.

  6. Non-photosynthetic pigments as potential biosignatures

    Science.gov (United States)

    Schwieterman, E. W.; Cockell, C. S.; Meadows, V. S.

    2014-03-01

    Photosynthetic organisms on Earth produce potentially detectable surface reflectance biosignatures due in part to the spectral location and strength of pigment absorption. However, life on Earth uses pigments for a multitude of purposes other than photosynthesis, including coping with extreme environments. Macroscopic environments exist on Earth where the surface reflectance is significantly altered by a nonphotosynthetic pigment, such as the case of hypersaline lakes and ponds (Oren et al. 1992). Here we explore the nature and potential detectability of non-photosynthetic pigments in disk-averaged planetary observations using a combination of laboratory measurements and archival reflectance spectra, along with simulated broadband photometry and spectra. The in vivo visible reflectance spectra of a cross section of pigmented microorganisms are presented to illustrate the spectral diversity of biologically produced pigments. Synthetic broadband colors are generated to show a significant spread in color space. A 1D radiative transfer model (Meadows & Crisp 1996; Crisp 1997) is used to approximate the spectra of scenarios where pigmented organisms are widespread on planets with Earth-like atmospheres. Broadband colors are revisited to show that colors due to surface reflectivity are not robust to the addition of scattering and absorption effects from the atmosphere. We consider a èbest case' plausible scenario for the detection of nonphotosynthetic pigments by using the Virtual Planetary Laboratory's 3D spectral Earth model (Robinson et al. 2011) to explore the detectability of the surface biosignature produced by pigmented halophiles that are widespread on an Earth-analog planet.

  7. Molecular Regulation of Photosynthetic Carbon Dioxide Fixation in Nonsulfur Purple Bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Tabita, Fred Robert [The Ohio State Univ., Columbus, OH (United States)

    2015-12-01

    The overall objective of this project is to determine the mechanism by which a transcriptional activator protein affects CO2 fixation (cbb) gene expression in nonsulfur purple photosynthetic bacteria, with special emphasis to Rhodobacter sphaeroides and with comparison to Rhodopseudomonas palustris. These studies culminated in several publications which indicated that additional regulators interact with the master regulator CbbR in both R. sphaeroides and R. palustris. In addition, the interactive control of the carbon and nitrogen assimilatory pathways was studied and unique regulatory signals were discovered.

  8. Application of photosynthetic N2-fixing cyanobacteria to the CELSS program

    Science.gov (United States)

    Packer, L.; Fry, I.; Belkin, S.

    1986-01-01

    Commercially available air lift fermentors were used to simultaneously monitor biomass production, N2-fixation, photosynthesis, respiration, and sensitivity to oxidative damage during growth under various nutritional and light regimes, to establish a data base for the integration of these organisms into a Closed Ecological Life Support System (CELSS) program. Certain cyanobacterial species have the unique ability to reduce atmospheric N2 to organic nitrogen. These organisms combine the ease of cultivation characteristics of prokaryotes with the fully developed photosynthetic apparatus of higher plants. This, along with their ability to adapt to changes in their environment by modulation of certain biochemical pathways, make them attractive candidates for incorporation into the CELSS program.

  9. A review on biomass production from C4 grasses: yield and quality for end-use.

    Science.gov (United States)

    Tubeileh, Ashraf; Rennie, Timothy J; Goss, Michael J

    2016-06-01

    With a dry biomass production exceeding 40Mgha(-1) in many environments, Miscanthus spp. is the most productive perennial C4 grass species thanks to five advantages over North American prairie tallgrasses. However, miscanthus has a slower nutrient remobilization system, resulting in higher nutrient concentrations at harvest. Perennial C4 grasses benefit from soil microbial associations, reducing their nutrient needs. For combustion purposes, grasses with low moisture content, high lignin and low nutrients are desired. For ethanol, preferred feedstock will have lower lignin, higher sugars, starch, or cellulose/hemicellulose depending on the conversion method. Species with high stem-to-leaf ratio provide better biofuel conversion efficiency and quality. Recently-developed transgenic switchgrass lines have much higher ethanol yields and lower transformation costs. Further selection and breeding are needed to optimize biomass quality and nutrient cycling. PMID:27258573

  10. Threshold Studies on TNT, Composition B, and C-4 Explosives Using the Steven Impact Test

    Energy Technology Data Exchange (ETDEWEB)

    Vandersall, K S; Switzer, L L; Garcia, F

    2005-09-26

    Steven Impact Tests were performed at low velocity on the explosives TNT, Comp B, and C-4 in attempts to obtain a threshold for reaction. A 76 mm helium driven gas gun was used to accelerate the Steven Test projectiles up to approximately 200 m/s in attempts to react (ignite) the explosive samples. Blast overpressure gauges, acoustic microphones, standard video and high-speed photography were used to characterize the level of any high explosive reaction violence. No bulk reactions were observed in the TNT, Composition B, or C-4 explosive samples impacted up to velocities in the range of 190-200 m/s. This work will outline the experimental details and discuss the lack of reaction when compared to the reaction thresholds of other common explosives.

  11. Leukotriene C4 production by murine mast cells: evidence of a role for extracellular leukotriene A4.

    Science.gov (United States)

    Dahinden, C A; Clancy, R M; Gross, M; Chiller, J M; Hugli, T E

    1985-10-01

    The glutathione-containing leukotriene C4 (LTC4) is a major mediator of smooth muscle contraction and is released by mast cells when antigen interacts with cell-bound IgE. Antigen-stimulated mast cells undergo phospholipase activation. We report a pathway of LTC4 production by mast cells that does not require phospholipase activation but depends on the interaction of activated neutrophils with unstimulated mast cells, using as an intermediate extracellular leukotriene A4 (LTA4). The epoxide LTA4 is released by neutrophils and, together with leukotriene B4 and 5-hydroxyeicosatetraenoic acid, constitutes the major lipoxygenase metabolites found in supernatants of stimulated neutrophils. Five minutes after activation of neutrophils by calcium ionophore A23187 we measured 136 pmol of extracellular LTA4 per 10(7) neutrophils (range 40-300, n = 7) by trapping the epoxide with alcohols. Therefore, we conclude that LTA4 is not just an intracellular leukotriene precursor but is released as a lipoxygenase metabolite. LTA4 is known to be stabilized by albumin and is efficiently converted by mast cells into LTC4 even at low LTA4 concentrations. The LTA4 complexed to albumin is converted into LTC4 rapidly and completely within 10-15 min. More than 50% of the LTA4 presented to mast cells is metabolized to LTC4 at concentrations of LTA4 between 0.2 and 2 nmol of LTA4 per 10(7) mast cells. This observation establishes a potential physiologic role for extracellular LTA4. Therefore, interactions between various cell types that release or utilize LTA4 may provide an important metabolic pathway for the production of leukotrienes.

  12. C4ISR项目前30项排行榜

    Institute of Scientific and Technical Information of China (English)

    Glenn; W.; Goodman; 邓大松(编译)

    2006-01-01

    未来的战场是一个高科技的战场,而信息化战场上的主角便是如今正在研制或已投产的C4ISR项目。因此,我们有必要将其中的30个顶尖项目列示于众,权当参考。

  13. Long-term tropospheric trend of octafluorocyclobutane (c-C4F8 or PFC-318

    Directory of Open Access Journals (Sweden)

    T. Röckmann

    2011-07-01

    Full Text Available Air samples collected at Cape Grim, Tasmania between 1978 and 2008 and during a series of more recent aircraft sampling programmes have been analysed to determine the atmospheric abundance and trend of octafluorocyclobutane (-C4F8 or PFC-318. c-C4F8 has an atmospheric lifetime in excess of 3000 yr and a global warming potential (GWP of 10 300 (100 yr time horizon, making it one of the most potent greenhouse gases detected in the atmosphere to date. The abundance of c-C4F8 in the Southern Hemisphere has risen from 0.35 ppt in 1978 to 1.2 ppt in 2010, and is currently increasing at a rate of around 0.03 ppt yr−1. It is the third most abundant perfluorocarbon (PFC in the present day atmosphere, behind CF4 (~75 ppt and C2F6 (~4 ppt. The origin of c-C4F8 is unclear. Using a 2-D global model to derive top-down global emissions based on the Cape Grim measurements yields a recent (2007 emission rate of around 1.1 Gg yr−1 and a cumulative emission up to and including 2007 of 38.1 Gg. Emissions reported on the EDGAR emissions database for the period 1986–2005 represent less than 1 % of the top-down emissions for the same period, which suggests there is a large unaccounted for source of this compound. It is also apparent that the magnitude of this source has varied considerably over the past 30 yr, declining sharply in the late 1980s before increasing again in the mid-1990s.

  14. 温馨空间——Citroen C4 Picasso

    Institute of Scientific and Technical Information of China (English)

    Juin

    2006-01-01

    雪铁龙全新C4毕加索成为欧洲多功能车的买家们一个新的选择,长4590毫米,宽1830毫米,高2100毫米的车厢内布置了三排座椅,最多可以搭乘7人,它扩宽了紧凑型MPV的使用定义。

  15. C4b-binding protein protects coagulation factor Va from inactivation by activated protein C

    NARCIS (Netherlands)

    van de Poel, RHL; Meijers, JCM; Rosing, J; Tans, G; Bouma, Bonno N.

    2000-01-01

    We investigated the effect of C4BP on APC-mediated inactivation of factor Va (FVa) in the absence and presence of protein S. FVa inactivation was biphasic (k(506) = 4.4 x 10(8) M-1 s(-1), k(306) = 2.7 x 10(7) M-1 s(-1)), and protein S accelerated Arg(306) cleavage approximately 10-fold. Preincubatio

  16. Contrasting strategies to cope with drought conditions by two tropical forage C4 grasses.

    Science.gov (United States)

    Cardoso, Juan Andrés; Pineda, Marcela; Jiménez, Juan de la Cruz; Vergara, Manuel Fernando; Rao, Idupulapati M

    2015-01-01

    Drought severely limits forage productivity of C4 grasses across the tropics. The avoidance of water deficit by increasing the capacity for water uptake or by controlling water loss are common responses in forage C4 grasses. Napier grass (Pennisetum purpureum) and Brachiaria hybrid cv. Mulato II are tropical C4 grasses used for livestock production due to their reputed resistance to drought conditions. However, there is scant information on the mechanisms used by these grasses to overcome water-limited conditions. Therefore, assessments of cumulative transpired water, shoot growth, leaf rolling, leaf gas exchange, dry mass production and a number of morpho-physiological traits were recorded over a period of 21 days under well-watered or drought conditions. Drought reduced shoot dry mass of both grasses by 35 %, yet each grass exhibited contrasting strategies to cope with water shortage. Napier grass transpired most available water by the end of the drought treatment, whereas a significant amount of water was still available for Mulato II. Napier grass maintained carbon assimilation until the soil was fairly dry, whereas Mulato II restricted water loss by early stomatal closure at relatively wet soil conditions. Our results suggest that Napier grass exhibits a 'water-spending' behaviour that might be targeted to areas with intermittent drought stress, whereas Mulato II displays a 'water-saving' nature that could be directed to areas with longer dry periods. PMID:26333827

  17. 雪铁龙Grand C4 Picasso上市倒计时

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    在全球屡创佳绩的雪铁龙全新车型Grand C4 Picasso进入中国上市倒计时,预计将于12月正式登陆中国。10月8日,雪铁龙进口车部门确认了这一消息。即将在中国上市的雪铁龙Grand C4 Picasso,基于C4平台开发,有着纯正的法兰西血统——优雅时尚、设计精湛,众多先进技术和理念的运用诠释了雪铁龙人性化的造车哲学。宽大舒适的驾乘空间、标志性的全景天窗、全新的Visiospace理念让这款高端MPV与众不同。

  18. Laboratory detection of the C3N an C4H free radicals

    Science.gov (United States)

    Gottlieb, C. A.; Gottlieb, E. W.; Thaddeus, P.; Kawamura, H.

    1983-01-01

    The millimeter-wave spectra of the linear carbon chain free radicals C3N and C4H, first identified in IRC + 10216 and hitherto observed only in a few astronomical sources, have been detected with a Zeeman-modulated spectrometer in laboratory glow discharges through low pressure flowing mixtures of N2 + HC3N and He + HCCH, respectively. Four successive rotational transitions between 168 and 198 GHz have been measured for C3N, and five rotational transitions between 143 and 200 GHz for C4H; each is a well-resolved spin doublet owing to the unpaired electron present in both species. Precise values for the rotational, centrifugal distortion, and spin doubling constants have been obtained, which, with hyperfine constants derived from observations of the lower rotational transitions in the astronomical source TMC 1, allow all the rotational transitions of C3N and C4H at frequencies less than 300 GHz to be calculated to an absolute accuracy exceeding 1 ppm.

  19. Shock wave study and theoretical modeling of the thermal decomposition of c-C4F8.

    Science.gov (United States)

    Cobos, C J; Hintzer, K; Sölter, L; Tellbach, E; Thaler, A; Troe, J

    2015-12-28

    The thermal dissociation of octafluorocyclobutane, c-C4F8, was studied in shock waves over the range 1150-2300 K by recording UV absorption signals of CF2. It was found that the primary reaction nearly exclusively produces 2 C2F4 which afterwards decomposes to 4 CF2. A primary reaction leading to CF2 + C3F6 is not detected (an upper limit to the yield of the latter channel was found to be about 10 percent). The temperature range of earlier single pulse shock wave experiments was extended. The reaction was shown to be close to its high pressure limit. Combining high and low temperature results leads to a rate constant for the primary dissociation of k1 = 10(15.97) exp(-310.5 kJ mol(-1)/RT) s(-1) in the range 630-1330 K, over which k1 varies over nearly 14 orders of magnitude. Calculations of the energetics of the reaction pathway and the rate constants support the conclusions from the experiments. Also they shed light on the role of the 1,4-biradical CF2CF2CF2CF2 as an intermediate of the reaction. PMID:26577435

  20. Pasteurella pneumotropica Evades the Human Complement System by Acquisition of the Complement Regulators Factor H and C4BP

    Science.gov (United States)

    Sahagún-Ruiz, Alfredo; Granados Martinez, Adriana Patricia; Breda, Leandro Carvalho Dantas; Fraga, Tatiana Rodrigues; Castiblanco Valencia, Mónica Marcela; Barbosa, Angela Silva; Isaac, Lourdes

    2014-01-01

    Pasteurella pneumotropica is an opportunist Gram negative bacterium responsible for rodent pasteurellosis that affects upper respiratory, reproductive and digestive tracts of mammals. In animal care facilities the presence of P. pneumotropica causes severe to lethal infection in immunodeficient mice, being also a potential source for human contamination. Indeed, occupational exposure is one of the main causes of human infection by P. pneumotropica. The clinical presentation of the disease includes subcutaneous abscesses, respiratory tract colonization and systemic infections. Given the ability of P. pneumotropica to fully disseminate in the organism, it is quite relevant to study the role of the complement system to control the infection as well as the possible evasion mechanisms involved in bacterial survival. Here, we show for the first time that P. pneumotropica is able to survive the bactericidal activity of the human complement system. We observed that host regulatory complement C4BP and Factor H bind to the surface of P. pneumotropica, controlling the activation pathways regulating the formation and maintenance of C3-convertases. These results show that P. pneumotropica has evolved mechanisms to evade the human complement system that may increase the efficiency by which this pathogen is able to gain access to and colonize inner tissues where it may cause severe infections. PMID:25347183

  1. Juvenile elastic arteries after 28 years of renal replacement therapy in a patient with complete complement C4 deficiency

    Directory of Open Access Journals (Sweden)

    Knoll Florian

    2012-12-01

    Full Text Available Abstract Background Complement activation products are present in atherosclerotic plaques. Recently, binding of complement to elastin and collagen in the aortic wall has been demonstrated, suggesting a role of complement in the development aortic stiffness and atherosclerosis. The definitive role of complement in atherosclerosis and arteriosclerosis, however, remains unclear. Case presentation We here describe a patient with hereditary complete deficiency of complement C4 suffering from Henoch-Schoenlein purpura and on renal replacement therapy for twenty-eight years. The patient had the full range of risk factors for vascular damage such as hypertension, volume overload, hyperphosphatemia and hyperparathyroidism. Despite that, his carotid artery intima media thickness was below the normal range and his pulse wave velocity was normal. In contrast, the patient’s coronary and peripheral muscular arteries were heavily calcified. Conclusion This case supports the hypothesis that complement plays an important role in the development of stiffness of elastic arteries. We speculate that inability to activate complement by the classical or lectin pathways protected the patient from atherosclerosis, arteriosclerosis, stiffening and calcification of the aorta and carotid arteries. Inhibition of complement activation may be a potential target for prophylactic and therapeutic interventions.

  2. Pasteurella pneumotropica evades the human complement system by acquisition of the complement regulators factor H and C4BP.

    Directory of Open Access Journals (Sweden)

    Alfredo Sahagún-Ruiz

    Full Text Available Pasteurella pneumotropica is an opportunist Gram negative bacterium responsible for rodent pasteurellosis that affects upper respiratory, reproductive and digestive tracts of mammals. In animal care facilities the presence of P. pneumotropica causes severe to lethal infection in immunodeficient mice, being also a potential source for human contamination. Indeed, occupational exposure is one of the main causes of human infection by P. pneumotropica. The clinical presentation of the disease includes subcutaneous abscesses, respiratory tract colonization and systemic infections. Given the ability of P. pneumotropica to fully disseminate in the organism, it is quite relevant to study the role of the complement system to control the infection as well as the possible evasion mechanisms involved in bacterial survival. Here, we show for the first time that P. pneumotropica is able to survive the bactericidal activity of the human complement system. We observed that host regulatory complement C4BP and Factor H bind to the surface of P. pneumotropica, controlling the activation pathways regulating the formation and maintenance of C3-convertases. These results show that P. pneumotropica has evolved mechanisms to evade the human complement system that may increase the efficiency by which this pathogen is able to gain access to and colonize inner tissues where it may cause severe infections.

  3. Engineered photosynthetic bacteria, method of manufacture of biofuels

    Energy Technology Data Exchange (ETDEWEB)

    Laible, Philip D.; Snyder, Seth W.

    2016-09-13

    The invention provides for a novel type of biofuel; a method for cleaving anchors from photosynthetic organisms; and a method for producing biofuels using photosynthetic organisms, the method comprising identifying photosynthesis co-factors and their anchors in the organisms; modifying the organisms to increase production of the anchors; accumulating biomass of the organisms in growth media; and harvesting the anchors.

  4. Properties and nucleotide se- quence of linear plasmid-like DNA pC4 from mitochondria of Cucumis sativus

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Four kinds of mitochondrial plasmid-like DNAs, designated pC1, pC2, pC3 and pC4, were detected in Cucumis sativus Jinyan No. 4. The electron microscopy ob- servation showed that pC4 was linear conformation. Complete sequence of pC4 was cloned into pUC19 with E. coli JM109 as host. Sequence analysis revealed that pC4 was 370 bp long, the shortest one among all the reported mitochondrial plasmid-like DNAs. pC4 was AT rich. It contained terminal direct repeat sequence (35 bp in length) as well as many short direct and inverted repeats. ORFs in pC4 were short. pC4 was found to be homologous to nuclear DNAs, but lack homology with main mitochondrial and chloroplast DNAs. pC4-homologous sequence also occurred in nuclear genome of Jinyan No. 7 which contained no mito- chondrial plasmid-like DNAs. The hybridization pattern of Jinyan No. 7 was slightly different from that of Jinyan No. 4. This suggested that pC4 occurred at the forepart of Cucumis sativus species divergence and integrated into the nuclear genome, and the pC4-homologous sequence in nucleus varied during species diverging.

  5. Influence of the quantity and quality of light on photosynthetic periodicity in coral endosymbiotic algae.

    Directory of Open Access Journals (Sweden)

    Michal Sorek

    Full Text Available Symbiotic corals, which are benthic organisms intimately linked with their environment, have evolved many ways to deal with fluctuations in the local marine environment. One possible coping mechanism is the endogenous circadian clock, which is characterized as free running, maintaining a ~24 h periodicity of circuits under constant stimuli or in the absence of external cues. The quantity and quality of light were found to be the most influential factors governing the endogenous clock for plants and algae. Unicellular dinoflagellate algae are among the best examples of organisms that exhibit circadian clocks using light as the dominant signal. This study is the first to examine the effects of light intensity and quality on the rhythmicity of photosynthesis in the symbiotic dinoflagellate Symbiodinium sp., both as a free-living organism and in symbiosis with the coral Stylophora pistillata. Oxygen production measurements in Symbiodinium cultures exhibited rhythmicity with a periodicity of approximately 24 h under constant high light (LL, whereas under medium and low light, the cycle time increased. Exposing Symbiodinium cultures and corals to spectral light revealed different effects of blue and red light on the photosynthetic rhythm, specifically shortening or increasing the cycle time respectively. These findings suggest that the photosynthetic rhythm is entrained by different light cues, which are wired to an endogenous circadian clock. Furthermore, we provide evidence that mRNA expression was higher under blue light for two potential cryptochrome genes and higher under red light for a phytochrome gene isolated from Symbiodinium. These results offer the first evidence of the impact of the intensity and quality of light on the photosynthetic rhythm in algal cells living freely or as part of a symbiotic association. Our results indicate the presence of a circadian oscillator in Symbiodinium governing the photosynthetic apparatus through a light

  6. Death-specific protein in a marine diatom regulates photosynthetic responses to iron and light availability.

    Science.gov (United States)

    Thamatrakoln, Kimberlee; Bailleul, Benjamin; Brown, Christopher M; Gorbunov, Maxim Y; Kustka, Adam B; Frada, Miguel; Joliot, Pierre A; Falkowski, Paul G; Bidle, Kay D

    2013-12-10

    Diatoms, unicellular phytoplankton that account for ∼40% of marine primary productivity, often dominate coastal and open-ocean upwelling zones. Limitation of growth and productivity by iron at low light is attributed to an elevated cellular Fe requirement for the synthesis of Fe-rich photosynthetic proteins. In the dynamic coastal environment, Fe concentrations and daily surface irradiance levels can vary by two to three orders of magnitude on short spatial and temporal scales. Although genome-wide studies are beginning to provide insight into the molecular mechanisms used by diatoms to rapidly respond to such fluxes, their functional role in mediating the Fe stress response remains uncharacterized. Here, we show, using reverse genetics, that a death-specific protein (DSP; previously named for its apparent association with cell death) in the coastal diatom Thalassiosira pseudonana (TpDSP1) localizes to the plastid and enhances growth during acute Fe limitation at subsaturating light by increasing the photosynthetic efficiency of carbon fixation. Clone lines overexpressing TpDSP1 had a lower quantum requirement for growth, increased levels of photosynthetic and carbon fixation proteins, and increased cyclic electron flow around photosystem I. Cyclic electron flow is an ATP-producing pathway essential in higher plants and chlorophytes with a heretofore unappreciated role in diatoms. However, cells under replete conditions were characterized as having markedly reduced growth and photosynthetic rates at saturating light, thereby constraining the benefits afforded by overexpression. Widespread distribution of DSP-like sequences in environmental metagenomic and metatranscriptomic datasets highlights the presence and relevance of this protein in natural phytoplankton populations in diverse oceanic regimes. PMID:24277817

  7. Ionothermal synthesis and structural characterization of [Cu(C4H6N2)4]Br2 and [Ni(C4H6N2)4]Br2

    Indian Academy of Sciences (India)

    Hong Wang; Bin Lu; Jingxiang Zhao; Qinghai Cai

    2015-07-01

    The ionothermal synthesis and spectroscopic, thermal and structural characterization of two new compounds [Cu(C4H6N2)4]Br2 (1) and [Ni(C4H6N2)4]Br2 (2) [(C4H6N2) = N-methylimidazole] are reported. In both 1 and 2, the central metal Cu (or Ni) ion adopts a square planar geometry and is bonded to the N-atoms of four terminal N-methylimidazole ligands.

  8. CT image digital measurement and clinical significance of C4 -C6 anterior fixed parameter

    Institute of Scientific and Technical Information of China (English)

    LI Xiaohe; LI Zhijun; GAO Shang

    2015-01-01

    Objective:To measure C3-C5 anterior fixed parametersment for the segmental anterior fixation surgery. Methods:The examination of the cervical spine in patients with CT imaging data were randomly selected from January 2009 - December 2012 , C4 - C6 cervical no lesions in 35 cases of imaging data were selected (20 males and 5 females , 25 to 50 years old, average 41. 2 years) ,The image data were rebuilded and measured di-ameter by Mimics 16. 01 software, vertebral body height, vertebrae transverse process hole diameter and diameter around, the left and right sides of the horizontal distance between the flange hole inside, left and right sides of the axis of the pedicle and sagittal axis and the horizontal axis angle and length were measured. Results and conclu-sion:the vertebral body diameter of C4-C6, (26. 67±0. 25) mm gradually increased to (32. 89±0. 12) mm, an-terior and posterior diameter of C4 -C6 ,(6. 89±0. 12) mm gradually increased to (8. 85±0. 44) mm, comparing differences between different segments were statistical significance;Vertebral body midline sagittal anterior, middle and posterior height from C4 [anterior was (7. 99 ±0. 51) mm, middle was(7. 09±0. 42) mm, posterior was (7. 76±0. 49) mm]. To C6 [anterior was (9. 89±0. 45 mm, middle was (8. 42±0. 75) mm, posterior was (8. 84±0. 26) mm], vertebral bodies were significant difference (P<0. 05); the vertebrae transverse process hole diameter and diameter around anterior and posterior were gradually increased with the increase of the sequence; on both sides of C4~C6 were by transverse process hole inside edge distance ( 25 . 10 ± 0 . 45 ) mm gradually increased to (28. 89±0. 56) mm, comparing differences between different segments were statistical significance;Pedicle axis , the sagittal axis and horizontal axis angle and length were gradually increasing with the increase of the cervical spine ordinal, difference is statistically significant.

  9. 急性排斥移植肾组织嗜酸性粒细胞浸润及C4d沉积%Eosinophil infiltration and peritubular capillary C4d deposition in acute renal allograft rejection

    Institute of Scientific and Technical Information of China (English)

    周广臣; 黎磊石; 刘志红

    2008-01-01

    目的:通过观察移植肾PTC C4d沉积和嗜酸性粒细胞浸润与AHR的关系,探讨两者之间的相关性及其在诊断急性体液排斥中的作用.方法:采用间接免疫荧光法检测移植肾组织C4d沉积.26例移植肾PTC C4d弥漫性强阳性染色患者为C4d阳性组,而30例移植肾PTC C4d阴性患者为对照组.光镜下记数移植肾组织嗜酸性粒细胞数.结果:(1)26例C4d阳性患者中经病理诊断为AHR为13例,AHR+ACR为8例,ACR1为3例,ACR2为2例.30例C4d阴性患者中,AHR为1例,AHR+ACR为2例,ACR1为21例,ACR2为6例.与C4d阴性组相比,C4d阳性组难治性排斥患者较多,常需进一步干预性措施,且较多的患者对抗排斥治疗无反应,移植肾失功率高(7/26).(2)C4d阳性组移植肾浸润嗜酸性粒细胞数亦明显高于C4d阴性组,两组相比差异显著(P<0.01).C4d阳性无细胞性排斥组移植肾间质浸润嗜酸性粒细胞数与C4d阳性+ACR组相比差异无显著性(P>0.05).C4d阳性ACR组移植肾间质浸润嗜酸性粒细胞数明显高于C4d阴性ACR组(P<0.05).结论:移植肾PTC C4d沉积与嗜酸性粒细胞浸润密切相关,两者在肾移植AHR诊断过程中起重要作用.

  10. Diversity and abundance of photosynthetic sponges in temperate Western Australia

    Directory of Open Access Journals (Sweden)

    Brümmer Franz

    2009-02-01

    Full Text Available Abstract Background Photosynthetic sponges are important components of reef ecosystems around the world, but are poorly understood. It is often assumed that temperate regions have low diversity and abundance of photosynthetic sponges, but to date no studies have investigated this question. The aim of this study was to compare the percentages of photosynthetic sponges in temperate Western Australia (WA with previously published data on tropical regions, and to determine the abundance and diversity of these associations in a range of temperate environments. Results We sampled sponges on 5 m belt transects to determine the percentage of photosynthetic sponges and identified at least one representative of each group of symbionts using 16S rDNA sequencing together with microscopy techniques. Our results demonstrate that photosynthetic sponges are abundant in temperate WA, with an average of 63% of sponge individuals hosting high levels of photosynthetic symbionts and 11% with low to medium levels. These percentages of photosynthetic sponges are comparable to those found on tropical reefs and may have important implications for ecosystem function on temperate reefs in other areas of the world. A diverse range of symbionts sometimes occurred within a small geographic area, including the three "big" cyanobacterial clades, Oscillatoria spongeliae, "Candidatus Synechococcus spongiarum" and Synechocystis species, and it appears that these clades all occur in a wide range of sponges. Additionally, spongin-permeating red algae occurred in at least 7 sponge species. This study provides the first investigation of the molecular phylogeny of rhodophyte symbionts in sponges. Conclusion Photosynthetic sponges are abundant and diverse in temperate WA, with comparable percentages of photosynthetic to non-photosynthetic sponges to tropical zones. It appears that there are three common generalist clades of cyanobacterial symbionts of sponges which occur in a wide

  11. Monte Carlo Simulation of Electron Swarms Parameters in c-C4F8/CF4 Gas Mixtures

    Institute of Scientific and Technical Information of China (English)

    LIU Xue-li; XIAO Deng-ming; WANG Yan-an; ZHANG Zhou-sheng

    2008-01-01

    The swarm parametes for c-C4F8/CF4 mixtures, including the density-normalized effective ionization coefficient, drift velocity and mean energy were calculated using Monte-Carlo method with the null collision technique. The overall density-reduced electric field strength could be varied between 150 and 500 Td,while the c-C4F8 content in gas mixtures is varied in the range of 0-100%. The value of the density-normalize deffective ionization coefficient shows a strong dependence on the c-C4F8 content, becoming more electronegative as the content of c-C4F8 is increased. The drift velocity of c-C4F4/CF4 mixtures is more affected by CF4. The calculated limiting field strength for c-C4F8/CF4 mixtures is higher than that of SF6/CF4.

  12. Optimal number of pigments in photosynthetic complexes

    CERN Document Server

    Jesenko, Simon

    2012-01-01

    We study excitation energy transfer in a simple model of photosynthetic complex. The model, described by Lindblad equation, consists of pigments interacting via dipole-dipole interaction. Overlapping of pigments induces an on-site energy disorder, providing a mechanism for blocking the excitation transfer. Based on the average efficiency as well as robustness of random configurations of pigments, we calculate the optimal number of pigments that should be enclosed in a pigment-protein complex of a given size. The results suggest that a large fraction of pigment configurations are efficient as well as robust if the number of pigments is properly chosen. We compare optimal results of the model to the structure of pigment-protein complexes as found in nature, finding good agreement.

  13. Photosynthetic machineries in nano-systems.

    Science.gov (United States)

    Nagy, László; Magyar, Melinda; Szabó, Tibor; Hajdu, Kata; Giotta, Livia; Dorogi, Márta; Milano, Francesco

    2014-01-01

    Photosynthetic reaction centres are membrane-spanning proteins, found in several classes of autotroph organisms, where a photoinduced charge separation and stabilization takes place with a quantum efficiency close to unity. The protein remains stable and fully functional also when extracted and purified in detergents thereby biotechnological applications are possible, for example, assembling it in nano-structures or in optoelectronic systems. Several types of bionanocomposite materials have been assembled by using reaction centres and different carrier matrices for different purposes in the field of light energy conversion (e.g., photovoltaics) or biosensing (e.g., for specific detection of pesticides). In this review we will summarize the current status of knowledge, the kinds of applications available and the difficulties to be overcome in the different applications. We will also show possible research directions for the close future in this specific field.

  14. When did C4 Photosynthesis originate: New evidence from δ13C analysis of single grass-pollen grains

    Science.gov (United States)

    Urban, M. A.; Nelson, D. M.; Pearson, A.; Hu, F.

    2009-12-01

    C4 grasses account for >20% of global primary productivity and dominate tropical, subtropical, and warm-temperate grassland ecosystems. Thus it is vital to understand when and why C4 photosynthesis first evolved in the grass family (Poaceae). However, because of limitations of most proxies, the origin of C4 grasses remains ambiguous. Grass pollen is morphologically indistinct below the family level, making pollen analysis a crude instrument for studying C4-grass evolution. Previous studies have investigated the timing of C4 evolution using molecular tools and δ13C records from n-alkanes, ungulate teeth, and paleosols, but they yield disparate results. Molecular clocks suggest that C4 grasses first evolved between 27 and 36 Ma (million years before present), coincident with the Oligocene decline in pCO2 from >1000 to herbarium specimens. New results should help pinpoint the timing of C4 evolution. Comparison of the timing of C4 evolution with independent pCO2, paleoclimate and paleoecological records will be used to assess the factor(s) that drove the evolution and eventual dominance of C4 grasses.

  15. APRIL stimulates NF-κB-mediated HoxC4 induction for AID expression in mouse B cells.

    Science.gov (United States)

    Park, Seok-Rae; Kim, Pyeung-Hyeun; Lee, Kyu-Seon; Lee, Sang-Hoon; Seo, Goo-Young; Yoo, Yung-Choon; Lee, Junglim; Casali, Paolo

    2013-02-01

    Activation-induced cytidine deaminase (AID) plays a key role in B cell immunoglobulin (Ig) class switch recombination (CSR) and somatic hypermutation (SHM). We have previously reported that the highly conserved homeodomain HoxC4 transcription factor binds to the Aicda (AID gene) promoter to induce AID expression. Here, we investigated the regulation of HoxC4 transcription by a proliferation-inducing ligand (APRIL) and B cell-activating factor belonging to the TNF family (BAFF) in mouse B cells. APRIL substantially increased both HoxC4 and AID expression, whereas BAFF induced the expression of AID but not HoxC4. To elucidate the underlying mechanisms, we constructed a HoxC4 gene promoter reporter vector and analyzed the promoter induction after APRIL stimulation. APRIL enhanced the HoxC4 promoter activity by 2.3-fold, and this increase disappeared when the second putative NF-κB-binding promoter element (NBE2) was mutated. Based on ChIP assays, we found that NF-κB bound to the HoxC4 promoter NBE2 region. Furthermore, the overexpression of NF-κB augmented the APRIL-induced HoxC4 promoter activity, while the expression of dominant negative-IκBα suppressed it. Taken together, our findings suggest that NF-κB mediates APRIL-induced HoxC4 transcription. PMID:23178148

  16. Photosynthetic carbon fixation characteristics of fruiting structures of Brassica campestris L

    International Nuclear Information System (INIS)

    Activities of key enzymes of the Calvin cycle and C4 metabolism, rates of CO2 fixation, and the initial products of photosynthetic 14CO2 fixation were determined in the podwall, seed coat (fruiting structures), and the subtending leaf (leaf below a receme) of Brassica campestris L. cv Toria. Compared to activities of ribulose-1,5-bisphosphate carboxylase and other Calvin cycle enzymes, e.g. NADP-glyceraldehyde-3-phosphate-dehydrogenase and ribulose-5-phosphate kinase, the activities of phosphoenol pyruvate carboxylase and other enzymes of C4 metabolism, viz. NADP-malate dehydrogenase, NADP-malic enzyme, glutamate pyruvate transaminase, and glutamate oxaloacetate transaminase, were generally much higher in seed than in podwall and leaf. Podwall and leaf were comparable to each other. Pulse-chase experiments showed that in seed the major product of 14CO2 assimilation was malate (in short time), whereas in podwall and leaf, the label initially appeared in 3-PGA. With time, the label moved to sucrose. In contrast to legumes, Brassica pods were able to fix net CO2 during light. However, respiratory losses were very high during the dark period

  17. Diverse arrangement of photosynthetic gene clusters in aerobic anoxygenic phototrophic bacteria.

    Directory of Open Access Journals (Sweden)

    Qiang Zheng

    Full Text Available BACKGROUND: Aerobic anoxygenic photototrophic (AAP bacteria represent an important group of marine microorganisms inhabiting the euphotic zone of the ocean. They harvest light using bacteriochlorophyll (BChl a and are thought to be important players in carbon cycling in the ocean. METHODOLOGY/PRINCIPAL FINDINGS: Aerobic anoxygenic phototrophic (AAP bacteria represent an important part of marine microbial communities. Their photosynthetic apparatus is encoded by a number of genes organized in a so-called photosynthetic gene cluster (PGC. In this study, the organization of PGCs was analyzed in ten AAP species belonging to the orders Rhodobacterales, Sphingomonadales and the NOR5/OM60 clade. Sphingomonadales contained comparatively smaller PGCs with an approximately size of 39 kb whereas the average size of PGCs in Rhodobacterales and NOR5/OM60 clade was about 45 kb. The distribution of four arrangements, based on the permutation and combination of the two conserved regions bchFNBHLM-LhaA-puhABC and crtF-bchCXYZ, does not correspond to the phylogenetic affiliation of individual AAP bacterial species. While PGCs of all analyzed species contained the same set of genes for bacteriochlorophyll synthesis and assembly of photosynthetic centers, they differed largely in the carotenoid biosynthetic genes. Spheroidenone, spirilloxanthin, and zeaxanthin biosynthetic pathways were found in each clade respectively. All of the carotenoid biosynthetic genes were found in the PGCs of Rhodobacterales, however Sphingomonadales and NOR5/OM60 strains contained some of the carotenoid biosynthetic pathway genes outside of the PGC. CONCLUSIONS/SIGNIFICANCE: Our investigations shed light on the evolution and functional implications in PGCs of marine aerobic anoxygenic phototrophs, and support the notion that AAP are a heterogenous physiological group phylogenetically scattered among Proteobacteria.

  18. Precise identification of photosynthetic glycerolipids in microalga Tetraselmis chuii by UPLC-ESI-Q-TOF-MS

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Precise structural identification of photosynthetic polar glycerolipids in microalga Tetraselmis chuii has been established using Ultra Performance Liquid Chromatography–Electrospray ionization-Quadrupole-Time of Flight Mass Spectrometry (UPLC-ESI-Q-TOF-MS) by direct analysis of the total lipids extract. The mass spectrometry was performed in reflective time-of-flight using electron spraying ionization in both positive and negative modes. The structural determination was based on the char-acteristic product ions yielded by different glycerolipids under ESI-MS/MS mode, and confirmed the molecular species by the carboxylate anions produced by glycerolipids in the negative mode. As a result, more than 40 lipid molecular species, including 11 monogalactosyldiacylglycerols (MGDG), 7 digalactosyldiacylglycerols (DGDG), 16 sulfoquinovosyldiacylglycerols (SQDG), and 9 phosphatidyl-glycerols (PG), were detected in Tetraselmis chuii, which had never been identified before in this mi-croalga. Furthermore, some intact lipid molecules with hydroxylated fatty acids that could not be de-tected by the traditional GC-MS method were found this time, providing novel information for the pho-tosynthetic lipidome of Tetraselmis chuii. Comparative studies on fatty acids at the sn-2 position showed that SQDG and MGDG are dominantly biosynthesized through the prokaryotic pathway, PG is a typically mixed biosynthetic pathway, while DGDG is somewhat peculiar with C14:0 and C16:0 at its sn-2 position. This method could provide a full structural profile of intact photosynthetic lipid molecular species, which may be applied to study the physiological and ecological functions of lipid by monitor-ing their individual changes.

  19. Potential role of multiple carbon fixation pathways during lipid accumulation in Phaeodactylum tricornutum

    Directory of Open Access Journals (Sweden)

    Valenzuela Jacob

    2012-06-01

    Full Text Available Abstract Background Phaeodactylum tricornutum is a unicellular diatom in the class Bacillariophyceae. The full genome has been sequenced (P. tricornutum gene expression profiles during nutrient-deprivation and lipid-accumulation, cell cultures were grown with a nitrate to phosphate ratio of 20:1 (N:P and whole-genome transcripts were monitored over time via RNA-sequence determination. Results The specific Nile Red (NR fluorescence (NR fluorescence per cell increased over time; however, the increase in NR fluorescence was initiated before external nitrate was completely exhausted. Exogenous phosphate was depleted before nitrate, and these results indicated that the depletion of exogenous phosphate might be an early trigger for lipid accumulation that is magnified upon nitrate depletion. As expected, many of the genes associated with nitrate and phosphate utilization were up-expressed. The diatom-specific cyclins cyc7 and cyc10 were down-expressed during the nutrient-deplete state, and cyclin B1 was up-expressed during lipid-accumulation after growth cessation. While many of the genes associated with the C3 pathway for photosynthetic carbon reduction were not significantly altered, genes involved in a putative C4 pathway for photosynthetic carbon assimilation were up-expressed as the cells depleted nitrate, phosphate, and exogenous dissolved inorganic carbon (DIC levels. P. tricornutum has multiple, putative carbonic anhydrases, but only two were significantly up-expressed (2-fold and 4-fold at the last time point when exogenous DIC levels had increased after the cessation of growth. Alternative pathways that could utilize HCO3- were also suggested by the gene expression profiles (e.g., putative propionyl-CoA and methylmalonyl-CoA decarboxylases. Conclusions The results indicate that P. tricornutum continued carbon dioxide reduction when population growth was arrested and different carbon-concentrating mechanisms were used dependent upon exogenous

  20. Disorder-promoted C4-symmetric magnetic order in iron-based superconductors

    Science.gov (United States)

    Hoyer, Mareike; Fernandes, Rafael M.; Levchenko, Alex; Schmalian, Jörg

    2016-04-01

    In most iron-based superconductors, the transition to the magnetically ordered state is closely linked to a lowering of structural symmetry from tetragonal (C4) to orthorhombic (C2). However, recently, a regime of C4-symmetric magnetic order has been reported in certain hole-doped iron-based superconductors. This novel magnetic ground state can be understood as a double-Q spin density wave characterized by two order parameters M1 and M2 related to each of the two Q vectors. Depending on the relative orientations of the order parameters, either a noncollinear spin-vortex crystal or a nonuniform charge-spin density wave could form. Experimentally, Mössbauer spectroscopy, neutron scattering, and muon spin rotation established the latter as the magnetic configuration of some of these optimally hole-doped iron-based superconductors. Theoretically, low-energy itinerant models do support a transition from single-Q to double-Q magnetic order, but with nearly degenerate spin-vortex crystal and charge-spin density wave states. In fact, extensions of these low-energy models including additional electronic interactions tip the balance in favor of the spin-vortex crystal, in apparent contradiction with the recent experimental findings. In this paper we revisit the phase diagram of magnetic ground states of low-energy multiband models in the presence of weak disorder. We show that impurity scattering not only promotes the transition from C2 to C4-magnetic order, but it also favors the charge-spin density wave over the spin-vortex crystal phase. Additionally, in the single-Q phase, our analysis of the nematic coupling constant in the presence of disorder supports the experimental finding that the splitting between the structural and stripe-magnetic transition is enhanced by disorder.

  1. Indus-wide C4 expansion between 7-6 Ma: an IODP Expedition 355 discovery

    Science.gov (United States)

    Liddy, H.; Feakins, S. J.; Tauxe, L.; Scardia, G.; Andò, S.; Bendle, J. A.; Clift, P. D.

    2015-12-01

    In April-May 2015, International Ocean Discovery Program Expedition 355 cored sediments from the Indus Fan (Site U1457, 67°55'E, 17°09'N, 3523 m water depth). Sediment recovery includes coarse silt to fine sand turbidite deposits spanning the late Miocene with a mineralogical composition indicating provenance predominantly from the Indus River catchment. We analyzed the carbon isotopic composition (δ13C values) of plant waxes and found a +9‰ shift in δ13C values of C28, C30 and C32 n-alkanoic acids. We infer that this carbon isotopic shift is the regional, offshore expression of the C4 expansion previously reported from the Siwalik Formation at the foreland of the Himalaya. Fortuitously the C4 expansion occurs at a time with frequent magnetic reversals into and out of Chrons C3B to C3A. Based on the shipboard age model for U1457, the isotopic shift occurs in C3Ar, an interval of 0.4 Myr with a sediment accumulation rate of 50 m/Myr. This allows us to securely date the Indus Fan transition to within 7-6 Ma on the geomagnetic polarity timescale. Independent of absolute age uncertainties, magnetostratigraphy allows us to report that the shifts were coincident in the Siwaliks and the broader region sampled by the Indus Fan. Based on the δ13C values of plant waxes at and after 6Ma (ca. -21‰) in the Indus Fan, the lowland Indus catchment must have been dominated by C4 grasslands.

  2. Electron correlation in C (4N+2) carbon rings aromatic vs. dimerized structures

    CERN Document Server

    Torelli, T; Torelli, Tommaso; Mitas, Lubos

    2000-01-01

    The electronic structure of C_(4N+2) carbon rings exhibits competing many-body effects of Huckel aromaticity, second-order Jahn-Teller and Peierls instability at large sizes. This leads to possible ground state structures with aromatic, bond angle or bond length alternated geometry. Highly accurate quantum Monte Carlo results indicate the existence of a crossover between C_10 and C_14 from bond angle to bond length alternation. The aromatic isomer is always a transition state. The driving mechanism is the second-order Jahn-Teller effect which keeps the gap open at all sizes.

  3. C4.5 Classifier for Solving the Problem of Water Resources Engineering

    OpenAIRE

    Chih-Chiang Wei; Jiing-Yun You

    2011-01-01

    The conventional decision-tree algorithm, such as ID3 and C5.0, executes rapidly and can easily be translated into if-thenelse rules.  This paper introduces popular classifier C4.5 for dealing with water resources engineering  problem. The  proposed approach was applied to the Shihmen Reservoir, which is one of the largest reservoirs, located upstream of the Tahan River Basin of northern Taiwan. The existing rules, namely M5-C rules, include two main flood stages: the peak-flow-preceding stag...

  4. Estrogen receptors bind to and activate the HOXC4/HoxC4 promoter to potentiate HoxC4-mediated activation-induced cytosine deaminase induction, immunoglobulin class switch DNA recombination, and somatic hypermutation.

    Science.gov (United States)

    Mai, Thach; Zan, Hong; Zhang, Jinsong; Hawkins, J Seth; Xu, Zhenming; Casali, Paolo

    2010-11-26

    Estrogen enhances antibody and autoantibody responses through yet to be defined mechanisms. It has been suggested that estrogen up-regulates the expression of activation-induced cytosine deaminase (AID), which is critical for antibody class switch DNA recombination (CSR) and somatic hypermutation (SHM), through direct activation of this gene. AID, as we have shown, is induced by the HoxC4 homeodomain transcription factor, which binds to a conserved HoxC4/Oct site in the AICDA/Aicda promoter. Here we show that estrogen-estrogen receptor (ER) complexes do not directly activate the AID gene promoter in B cells undergoing CSR. Rather, they bind to three evolutionarily conserved and cooperative estrogen response elements (EREs) we identified in the HOXC4/HoxC4 promoter. By binding to these EREs, ERs synergized with CD154 or LPS and IL-4 signaling to up-regulate HoxC4 expression, thereby inducing AID and CSR without affecting B cell proliferation or plasmacytoid differentiation. Estrogen administration in vivo significantly potentiated CSR and SHM in the specific antibody response to the 4-hydroxy-3-nitrophenylacetyl hapten conjugated with chicken γ-globulin. Ablation of HoxC4 (HoxC4(-/-)) abrogated the estrogen-mediated enhancement of AID gene expression and decreased CSR and SHM. Thus, estrogen enhances AID expression by activating the HOXC4/HoxC4 promoter and inducing the critical AID gene activator, HoxC4.

  5. Cells of the affine Weyl group (C)4 in quasi-split case%拟分裂情形下仿射Weyl群(C)4的胞腔

    Institute of Scientific and Technical Information of China (English)

    岳明仕

    2013-01-01

    The affine Weyl group ((C)4, S) can be considered as the fixed point set of the affine Weyl group ((A)7, (S)) under a certain group automorphism α. Let (l): (A)7→N be the length function of (A)7. The restriction of (l) on (C)4, denoted by L, is a weighted function on (C)4. This paper classified the cells in weighted Coxteger group ((C)4, L).%仿射Weyl群((C4),S)可被看成仿射Weyl群((A)7,(S))在某个群自同构α下的不动点集合.记(l):(A)7→N是仿射Weyl群(A)7上的长度函数.则(l)在(C)4上的限制为(C)4的权函数记作L.本文给出带权Coxeter群((C)4,L)的胞腔分解.

  6. Canopy warming caused photosynthetic acclimation and reduced seed yield in maize grown at ambient and elevated [CO2 ].

    Science.gov (United States)

    Ruiz-Vera, Ursula M; Siebers, Matthew H; Drag, David W; Ort, Donald R; Bernacchi, Carl J

    2015-11-01

    Rising atmospheric CO2 concentration ([CO2 ]) and attendant increases in growing season temperature are expected to be the most important global change factors impacting production agriculture. Although maize is the most highly produced crop worldwide, few studies have evaluated the interactive effects of elevated [CO2 ] and temperature on its photosynthetic physiology, agronomic traits or biomass, and seed yield under open field conditions. This study investigates the effects of rising [CO2 ] and warmer temperature, independently and in combination, on maize grown in the field throughout a full growing season. Free-air CO2 enrichment (FACE) technology was used to target atmospheric [CO2 ] to 200 μmol mol(-1) above ambient [CO2 ] and infrared heaters to target a plant canopy increase of 3.5 °C, with actual season mean heating of ~2.7 °C, mimicking conditions predicted by the second half of this century. Photosynthetic gas-exchange parameters, leaf nitrogen and carbon content, leaf water potential components, and developmental measurements were collected throughout the season, and biomass and yield were measured at the end of the growing season. As predicted for a C4 plant, elevated [CO2 ] did not stimulate photosynthesis, biomass, or yield. Canopy warming caused a large shift in aboveground allocation by stimulating season-long vegetative biomass and decreasing reproductive biomass accumulation at both CO2 concentrations, resulting in decreased harvest index. Warming caused a reduction in photosynthesis due to down-regulation of photosynthetic biochemical parameters and the decrease in the electron transport rate. The reduction in seed yield with warming was driven by reduced photosynthetic capacity and by a shift in aboveground carbon allocation away from reproduction. This field study portends that future warming will reduce yield in maize, and this will not be mitigated by higher atmospheric [CO2 ] unless appropriate adaptation traits can be introduced

  7. Temperature Effects on the Growth Rates and Photosynthetic Activities of Symbiodinium Cells

    Directory of Open Access Journals (Sweden)

    Widiastuti Karim

    2015-06-01

    Full Text Available Coral bleaching is caused by environmental stress and susceptibility to bleaching stress varies among types of coral. The physiological properties of the algal symbionts (Symbiodinium spp., especially extent of damage to PSII and its repair capacity, contribute importantly to this variability in stress susceptibility. The objective of the present study was to investigate the relationship between the growth rates and photosynthetic activities of six cultured strains of Symbiodinium spp. (clades A, B, C, D, and F at elevated temperature (33 °C. We also observed the recovery of photodamaged-PSII in the presence or absence of a chloroplast protein synthesis inhibitor (lincomycin. The growth rates and photochemical efficiencies of PSII (Fv/Fm decreased in parallel at high temperature in thermally sensitive strains, B-K100 (clade B followed by culture name and A-Y106, but not in thermally tolerant strains, F-K102 and D-K111. In strains A-KB8 and C-Y103, growth declined markedly at high temperature, but Fv/Fm decreased only slightly. These strains may reallocate energy from growth to the repair of damaged photosynthetic machineries or protection pathways. Alternatively, since recoveries of photo-damaged PSII at 33 °C were modest in strains A-KB8 and C-Y103, thermal stressing of other metabolic pathways may have reduced growth rates in these two strains. This possibility should be explored in future research efforts.

  8. Mycorrhizal Symbiotic Efficiency on C3 and C4 Plants under Salinity Stress – A Meta-Analysis

    Science.gov (United States)

    Chandrasekaran, Murugesan; Kim, Kiyoon; Krishnamoorthy, Ramasamy; Walitang, Denver; Sundaram, Subbiah; Joe, Manoharan M.; Selvakumar, Gopal; Hu, Shuijin; Oh, Sang-Hyon; Sa, Tongmin

    2016-01-01

    A wide range of C3 and C4 plant species could acclimatize and grow under the impact of salinity stress. Symbiotic relationship between plant roots and arbuscular mycorrhizal fungi (AMF) are widespread and are well known to ameliorate the influence of salinity stress on agro-ecosystem. In the present study, we sought to understand the phenomenon of variability on AMF symbiotic relationship on saline stress amelioration in C3 and C4 plants. Thus, the objective was to compare varied mycorrhizal symbiotic relationship between C3 and C4 plants in saline conditions. To accomplish the above mentioned objective, we conducted a random effects models meta-analysis across 60 published studies. An effect size was calculated as the difference in mycorrhizal responses between the AMF inoculated plants and its corresponding control under saline conditions. Responses were compared between (i) identity of AMF species and AMF inoculation, (ii) identity of host plants (C3 vs. C4) and plant functional groups, (iii) soil texture and level of salinity and (iv) experimental condition (greenhouse vs. field). Results indicate that both C3 and C4 plants under saline condition responded positively to AMF inoculation, thereby overcoming the predicted effects of symbiotic efficiency. Although C3 and C4 plants showed positive effects under low (EC 8 ds/m) saline conditions, C3 plants showed significant effects for mycorrhizal inoculation over C4 plants. Among the plant types, C4 annual and perennial plants, C4 herbs and C4 dicot had a significant effect over other counterparts. Between single and mixed AMF inoculants, single inoculants Rhizophagus irregularis had a positive effect on C3 plants whereas Funneliformis mosseae had a positive effect on C4 plants than other species. In all of the observed studies, mycorrhizal inoculation showed positive effects on shoot, root and total biomass, and in nitrogen, phosphorous and potassium (K) uptake. However, it showed negative effects in sodium (Na

  9. Mycorrhizal Symbiotic Efficiency on C3 and C4 Plants under Salinity Stress - A Meta-Analysis.

    Science.gov (United States)

    Chandrasekaran, Murugesan; Kim, Kiyoon; Krishnamoorthy, Ramasamy; Walitang, Denver; Sundaram, Subbiah; Joe, Manoharan M; Selvakumar, Gopal; Hu, Shuijin; Oh, Sang-Hyon; Sa, Tongmin

    2016-01-01

    A wide range of C3 and C4 plant species could acclimatize and grow under the impact of salinity stress. Symbiotic relationship between plant roots and arbuscular mycorrhizal fungi (AMF) are widespread and are well known to ameliorate the influence of salinity stress on agro-ecosystem. In the present study, we sought to understand the phenomenon of variability on AMF symbiotic relationship on saline stress amelioration in C3 and C4 plants. Thus, the objective was to compare varied mycorrhizal symbiotic relationship between C3 and C4 plants in saline conditions. To accomplish the above mentioned objective, we conducted a random effects models meta-analysis across 60 published studies. An effect size was calculated as the difference in mycorrhizal responses between the AMF inoculated plants and its corresponding control under saline conditions. Responses were compared between (i) identity of AMF species and AMF inoculation, (ii) identity of host plants (C3 vs. C4) and plant functional groups, (iii) soil texture and level of salinity and (iv) experimental condition (greenhouse vs. field). Results indicate that both C3 and C4 plants under saline condition responded positively to AMF inoculation, thereby overcoming the predicted effects of symbiotic efficiency. Although C3 and C4 plants showed positive effects under low (EC 8 ds/m) saline conditions, C3 plants showed significant effects for mycorrhizal inoculation over C4 plants. Among the plant types, C4 annual and perennial plants, C4 herbs and C4 dicot had a significant effect over other counterparts. Between single and mixed AMF inoculants, single inoculants Rhizophagus irregularis had a positive effect on C3 plants whereas Funneliformis mosseae had a positive effect on C4 plants than other species. In all of the observed studies, mycorrhizal inoculation showed positive effects on shoot, root and total biomass, and in nitrogen, phosphorous and potassium (K) uptake. However, it showed negative effects in sodium (Na

  10. Tandem mass spectrometry-based detection of c4'-oxidized abasic sites at specific positions in DNA fragments.

    Science.gov (United States)

    Chowdhury, Goutam; Guengerich, F Peter

    2009-07-01

    Oxidative damage to DNA has been linked to aging, cancer, and other biological processes. Reactive oxygen species and various antitumor agents including bleomycin and ionizing radiation have been shown to cause oxidative DNA sugar damage. Detection of DNA lesions is important for understanding the toxicological or therapeutic consequences associated with such agents. C4'-oxidized abasic sites (C4-AP) are produced by the antitumor drug bleomycin and ionizing radiation. The currently available methods for the detection of C4-AP cannot provide both structural and sequence information. We have developed an LC-ESI-MS-based approach for specific detection and mapping of C4-AP from a mixture of lesions. We show using Fe-bleomycin-damaged DNA that C4-AP can be detected at cytosine and thymine sites by direct MS analysis. Our results reveal that collision-induced dissociation of C4-AP-containing oligonucleotides results in preferential fragmentation at C4-AP sites with the formation of the unique a* ions (18 amu more than the a-B ions) that allow mapping of the C4-AP sites. Various chemical modification strategies (e.g., reduction with NaBH4 and NaBD4 and derivatization with methoxyamine and hydrazine, followed by LC-MS analysis) were also used for unambiguous detection of C4-AP sites. Finally, we show that the methods described here can detect the presence of C4-AP at specific sites in a complex sample such as hydroxyl radical-damaged DNA. The LC-MS approach was also used for the simultaneous detection of the other C4'-oxidation end product, 3'-phosphoglycolate, at a specific site in hydroxyl radical-damaged DNA. Thus, LC-MS provides a rapid and direct approach for the detection and mapping of oxidative DNA lesions. PMID:19496605

  11. Climate and CO2 modulate the C3/C4 balance and δ13C signal in simulated vegetation

    Directory of Open Access Journals (Sweden)

    D. Jolly

    2009-08-01

    Full Text Available Climate and atmospheric CO2 effects on the balance between C3 and C4 plants have received conflicting interpretations based on the analysis of carbon isotopic fractionation (δ13C in sediments. But, climate and CO2 effects on the C3/C4 balance and δ13C signal are rarely addressed together. Here, we use a process-based model (BIOME4 to disentangle these effects. We simulated the vegetation response to climate and CO2 atmospheric concentration (pCO2 in two sites in which vegetation changed oppositely, with respect to C3 and C4 plants abundance, during the Last Glacial Maximum to Holocene transition. The C3/C4 balance and δ13C signal were primarily sensitive to temperature and CO2 atmospheric partial pressure. The simulated variations were in agreement with patterns observed in palaeorecords. Water limitation favoured C4 plants in case of large negative deviation in rainfall. Although a global parameter, pCO2 affected the δ13C signal differently from one site to the other because of its effects on the C3/C4 balance and on carbon isotopic fractionation in C3 and C4 plants. Simulated Plant functional types (PFT also differed in their composition and response from one site to the other. The C3/C4 balance involved different competing C3 and C4 PFT, and not homogeneous C3 and C4 poles as often assumed. Process-based vegetation modelling emphasizes the need to account for multiple factors when a palaeo-δ13C signal is used to reconstruct the C3/C4 balance.

  12. Excited state coherent dynamics in light-harvesting complexes from photosynthetic marine algae

    Science.gov (United States)

    Richards, G. H.; Wilk, K. E.; Curmi, P. M. G.; Quiney, H. M.; Davis, J. A.

    2012-08-01

    We explore coherence dynamics in light-harvesting complexes and their interactions with other electronic states and vibrational modes. This is achieved by utilizing a two-colour four-wave mixing spectroscopy to excite and analyse a specific coherence pathway in the phycocyanin-645 (PC645) light-harvesting complex. We observe the dephasing rate increase as a function of temperature and oscillations in the signal intensity as a function of waiting time which reveals coherent excitation of pathways not directly resonant with the laser pulses. This coherent excitation of non-resonant electronic states implies strong coupling to phonon modes, which is necessary if coherent energy transfer between non-resonant states is to play any role in photosynthetic energy transfer.

  13. Excited state coherent dynamics in light-harvesting complexes from photosynthetic marine algae

    International Nuclear Information System (INIS)

    We explore coherence dynamics in light-harvesting complexes and their interactions with other electronic states and vibrational modes. This is achieved by utilizing a two-colour four-wave mixing spectroscopy to excite and analyse a specific coherence pathway in the phycocyanin-645 (PC645) light-harvesting complex. We observe the dephasing rate increase as a function of temperature and oscillations in the signal intensity as a function of waiting time which reveals coherent excitation of pathways not directly resonant with the laser pulses. This coherent excitation of non-resonant electronic states implies strong coupling to phonon modes, which is necessary if coherent energy transfer between non-resonant states is to play any role in photosynthetic energy transfer. (paper)

  14. C4 Plants as Biofuel Feedstocks: Optimising Biomass Production and Feedstock Quality from a Lignocellulosic Perspective

    Institute of Scientific and Technical Information of China (English)

    Caitlin S.Byrt; Christopher P.L.Grof; Robert T.Furbank

    2011-01-01

    The main feedstocks for bioethanol are sugarcane (Saccharum offic-inarum) and maize (Zea mays), both of which are C4 grasses, highly efficient at converting solar energy into chemical energy, and both are food crops. As the systems for lignocellulosic bioethanol production become more efficient and cost effective, plant biomass from any source may be used as a feedstock for bioethanol production. Thus, a move away from using food plants to make fuel is possible, and sources of biomass such as wood from forestry and plant waste from cropping may be used. However, the bioethanol industry will need a continuous and reliable supply of biomass that can be produced at a low cost and with minimal use of water, fertilizer and arable land. As many C4 plants have high light, water and nitrogen use efficiency, as compared with C3 species, they are ideal as feedstock crops. We consider the productivity and resource use of a number of candidate plant species, and discuss biomass 'quality', that is, the composition of the plant cell wall.

  15. INFLUENCE OF POZZOLANA ON THE HYDRATION OF C4AF RICH CEMENT IN CHLORIDE ENVIRONMENT

    Directory of Open Access Journals (Sweden)

    IRMANTAS BARAUSKAS

    2013-03-01

    Full Text Available This study investigated the influence of natural pozzolana - opoka additive on the hydration of C4AF rich cement and the effects of chloride ions on the hydrates formed. In the samples, 25 % (by weight of the sintered C4AF rich cement and OPC was replaced with pozzolana. The mixtures were hardened for 28 days in water, soaked in a saturated NaCl solution for 3 months at 20°C. It was estimated that under normal conditions, pozzolana additive accelerates the hydration of calcium silicates and initiates the formation of CO32- - AFm in the Brownmillerite rich cement. However, the hydration of Brownmillerite cement with opoka additive is still slower to compare with hydration of Portland cement. Also, opoka decreases total porosity and threshold pore diameter of Brownmillerite cement paste after two days of hydration. After 28 days of hydration threshold pore diameter became smaller even to compare with threshold pore diameter of Portland cement. Opoka additive promotes the formation of Friedel’s salt in Brownmillerite samples treated in saturated NaCl solution, because CO32-–AFm affected by saturated NaCl solution become unstable and takes part in reactions producing Friedel’s salt.

  16. SHOCK INITIATION OF COMPOSITION B AND C-4 EXPLOSIVES; EXPERIMENTS AND MODELING

    Energy Technology Data Exchange (ETDEWEB)

    Urtiew, P A; Vandersall, K S; Tarver, C M; Garcia, F; Forbes, J W

    2006-08-18

    Shock initiation experiments on the explosives Composition B and C-4 were performed to obtain in-situ pressure gauge data for the purpose of providing the Ignition and Growth reactive flow model with proper modeling parameters. A 100 mm diameter propellant driven gas gun was utilized to initiate the explosive charges containing manganin piezoresistive pressure gauge packages embedded in the explosive sample. Experimental data provided new information on the shock velocity--particle velocity relationship for each of the investigated material in their respective pressure range. The run-distance-to-detonation points on the Pop-plot for these experiments showed agreement with previously published data, and Ignition and Growth modeling calculations resulted in a good fit to the experimental data. Identical ignition and growth reaction rate parameters were used for C-4 and Composition B, and the Composition B model also included a third reaction rate to simulate the completion of reaction by the TNT component. This model can be applied to shock initiation scenarios that have not or cannot be tested experimentally with a high level of confidence in its predictions.

  17. SHOCK INITIATION EXPERIMENTS AND MODELING OF COMPOSITION B AND C-4

    Energy Technology Data Exchange (ETDEWEB)

    Urtiew, P A; Vandersall, K S; Tarver, C M; Garcia, F; Forbes, J W

    2006-06-13

    Shock initiation experiments on the explosives Composition B and C-4 were performed to obtain in-situ pressure gauge data for the purpose of determining the Ignition and Growth reactive flow model with proper modeling parameters. A 101 mm diameter propellant driven gas gun was utilized to initiate the explosive charges containing manganin piezoresistive pressure gauge packages embedded in the explosive sample. Experimental data provided new information on the shock velocity versus particle velocity relationship for each of the investigated materials in their respective pressure range. The run-distance-to-detonation points on the Pop-plot for these experiments showed agreement with previously published data, and Ignition and Growth modeling calculations resulted in a good fit to the experimental data. These experimental data were used to determine Ignition and Growth reactive flow model parameters for these explosives. Identical ignition and growth reaction rate parameters were used for C-4 and Composition B, and the Composition B model also included a third reaction rate to simulate the completion of reaction by the TNT component. The Composition B model was then tested on existing short pulse duration, gap test, and projectile impact shock initiation with good results. This Composition B model can be applied to shock initiation scenarios that have not or cannot be tested experimentally with a high level of confidence in its predictions.

  18. C4 plants as biofuel feedstocks: optimising biomass production and feedstock quality from a lignocellulosic perspective.

    Science.gov (United States)

    Byrt, Caitlin S; Grof, Christopher P L; Furbank, Robert T

    2011-02-01

    The main feedstocks for bioethanol are sugarcane (Saccharum officinarum) and maize (Zea mays), both of which are C(4) grasses, highly efficient at converting solar energy into chemical energy, and both are food crops. As the systems for lignocellulosic bioethanol production become more efficient and cost effective, plant biomass from any source may be used as a feedstock for bioethanol production. Thus, a move away from using food plants to make fuel is possible, and sources of biomass such as wood from forestry and plant waste from cropping may be used. However, the bioethanol industry will need a continuous and reliable supply of biomass that can be produced at a low cost and with minimal use of water, fertilizer and arable land. As many C(4) plants have high light, water and nitrogen use efficiency, as compared with C(3) species, they are ideal as feedstock crops. We consider the productivity and resource use of a number of candidate plant species, and discuss biomass 'quality', that is, the composition of the plant cell wall. PMID:21205189

  19. A C4-oxidizing lytic polysaccharide monooxygenase cleaving both cellulose and cello-oligosaccharides.

    Science.gov (United States)

    Isaksen, Trine; Westereng, Bjørge; Aachmann, Finn L; Agger, Jane W; Kracher, Daniel; Kittl, Roman; Ludwig, Roland; Haltrich, Dietmar; Eijsink, Vincent G H; Horn, Svein J

    2014-01-31

    Lignocellulosic biomass is a renewable resource that significantly can substitute fossil resources for the production of fuels, chemicals, and materials. Efficient saccharification of this biomass to fermentable sugars will be a key technology in future biorefineries. Traditionally, saccharification was thought to be accomplished by mixtures of hydrolytic enzymes. However, recently it has been shown that lytic polysaccharide monooxygenases (LPMOs) contribute to this process by catalyzing oxidative cleavage of insoluble polysaccharides utilizing a mechanism involving molecular oxygen and an electron donor. These enzymes thus represent novel tools for the saccharification of plant biomass. Most characterized LPMOs, including all reported bacterial LPMOs, form aldonic acids, i.e., products oxidized in the C1 position of the terminal sugar. Oxidation at other positions has been observed, and there has been some debate concerning the nature of this position (C4 or C6). In this study, we have characterized an LPMO from Neurospora crassa (NcLPMO9C; also known as NCU02916 and NcGH61-3). Remarkably, and in contrast to all previously characterized LPMOs, which are active only on polysaccharides, NcLPMO9C is able to cleave soluble cello-oligosaccharides as short as a tetramer, a property that allowed detailed product analysis. Using mass spectrometry and NMR, we show that the cello-oligosaccharide products released by this enzyme contain a C4 gemdiol/keto group at the nonreducing end. PMID:24324265

  20. A C4-oxidizing Lytic Polysaccharide Monooxygenase Cleaving Both Cellulose and Cello-oligosaccharides*

    Science.gov (United States)

    Isaksen, Trine; Westereng, Bjørge; Aachmann, Finn L.; Agger, Jane W.; Kracher, Daniel; Kittl, Roman; Ludwig, Roland; Haltrich, Dietmar; Eijsink, Vincent G. H.; Horn, Svein J.

    2014-01-01

    Lignocellulosic biomass is a renewable resource that significantly can substitute fossil resources for the production of fuels, chemicals, and materials. Efficient saccharification of this biomass to fermentable sugars will be a key technology in future biorefineries. Traditionally, saccharification was thought to be accomplished by mixtures of hydrolytic enzymes. However, recently it has been shown that lytic polysaccharide monooxygenases (LPMOs) contribute to this process by catalyzing oxidative cleavage of insoluble polysaccharides utilizing a mechanism involving molecular oxygen and an electron donor. These enzymes thus represent novel tools for the saccharification of plant biomass. Most characterized LPMOs, including all reported bacterial LPMOs, form aldonic acids, i.e., products oxidized in the C1 position of the terminal sugar. Oxidation at other positions has been observed, and there has been some debate concerning the nature of this position (C4 or C6). In this study, we have characterized an LPMO from Neurospora crassa (NcLPMO9C; also known as NCU02916 and NcGH61–3). Remarkably, and in contrast to all previously characterized LPMOs, which are active only on polysaccharides, NcLPMO9C is able to cleave soluble cello-oligosaccharides as short as a tetramer, a property that allowed detailed product analysis. Using mass spectrometry and NMR, we show that the cello-oligosaccharide products released by this enzyme contain a C4 gemdiol/keto group at the nonreducing end. PMID:24324265

  1. THRESHOLD STUDIES ON TNT, COMPOSITION B, C-4, AND ANFO EXPLOSIVES USING THE STEVEN IMPACT TEST

    Energy Technology Data Exchange (ETDEWEB)

    Vandersall, K S; Switzer, L L; Garcia, F

    2006-06-20

    Steven Impact Tests were performed at low velocity on the explosives TNT (trinitrotolulene), Composition B (63% RDX, 36% TNT, and 1% wax by weight), C-4 (91% RDX, 5.3% Di (2-ethylhexyl) sebacate, 2.1% Polyisobutylene, and 1.6% motor oil by weight) and ANFO (94% ammonium Nitrate with 6% Fuel Oil) in attempts to obtain a threshold for reaction. A 76 mm helium driven gas gun was used to accelerate the Steven Test projectiles up to approximately 200 m/s in attempts to react (ignite) the explosive samples. Blast overpressure gauges, acoustic microphones, standard video and high-speed photography were used to characterize the level of any high explosive reaction violence. No bulk reactions were observed in the TNT, Composition B, C-4 or ANFO explosive samples impacted up to velocities in the range of 190-200 m/s. This work will outline the experimental details and discuss the lack of reaction when compared to the reaction thresholds of other common explosives. These results will also be compared to that of the Susan Test and reaction thresholds observed in the common small-scale safety tests such as the drop hammer and friction tests in hopes of drawing a correlation.

  2. Histopathological Correlation of Atypical (C3 and Suspicious (C4 Categories in Fine Needle Aspiration Cytology of the Breast

    Directory of Open Access Journals (Sweden)

    Prashant Goyal

    2013-01-01

    Full Text Available Introduction. According to the National Cancer Institute (NCI guidelines in 1996, breast lesions are categorized as C1 to C5 on fine needle aspiration (FNA cytology. Very few studies are available in the English literature analyzing histopathology outcome of C3 (atypical, probably benign and C4 (suspicious, probably malignant lesions. Our study aims to correlate FNA cytology of breast lump diagnosed as C3 and C4 lesion with histopathological examination. Methods. During a period of 2 years, 59 cases of C3 and 26 cases of C4 were retrieved from total 1093 cases of breast FNA. All the cases were reviewed by two cytopathologists independently. The final 24 cases of C3 and 16 cases of C4 categories were correlated with histopathological diagnosis. Result. Among C3 category, 37.5% revealed malignant findings, whereas of C4 category, 87.5% were malignant on histopathology. This difference was statistically significant (P=0.0017. Sensitivity, specificity, positive predictive values, and negative predictive value of C4 category in diagnosing breast malignancy were 60.8%, 88.2%, 87.5%, and 62.5%, respectively. Conclusion. Although FNAC is simple, safe, cost-effective and accurate method for diagnosis of breast masses, one must be aware of its limitations particularly in C3 and C4 categories. Also, since both these categories carry different probabilities of malignancy and thus different management, we therefore, support maintaining C3 and C4 categories.

  3. C4.4A gene ablation is compatible with normal epidermal development and causes modest overt phenotypes

    DEFF Research Database (Denmark)

    Kriegbaum, Mette Camilla; Jacobsen, Benedikte; Fuchtbauer, Annette;

    2016-01-01

    C4.4A is a modular glycolipid-anchored Ly6/uPAR/alpha-neurotoxin multidomain protein that exhibits a prominent membrane-associated expression in stratified squamous epithelia. C4.4A is also expressed in various solid cancer lesions, where high expression levels often are correlated to poor...

  4. Complement system proteins which interact with C3b or C4b A superfamily of structurally related proteins

    DEFF Research Database (Denmark)

    Reid, K B M; Bentley, D R; Campbell, R D;

    1986-01-01

    Recent cDNA sequencing data has allowed the prediction of the entire amino acid sequences of complement components factor B and C2, the complement control proteins factor H and C4b-binding protein and a partial sequence for the Cab/C4b receptor CR1. These proteins all contain internal repeating u...

  5. Approach to Interfacial and Intramolecular Electron Transfer of the Diheme Protein Cytochrome c(4) Assembled on Au(111) Surfaces

    DEFF Research Database (Denmark)

    Chi, Qijin; Zhang, Jingdong; Taner, Arslan;

    2010-01-01

    protein Pseudomonas stutzeri cytochrome c(4) has been a target for intramolecular, interheme ET. We report here voltammetric and in situ scanning tunneling microscopy (STM) data for P. stutzeri cyt c(4) at single-crystal, atomically planar Au(111)-electrode surfaces modified by variable-length omega...

  6. Measurement of Swarm Parameters of c-C4F8/CO2 and Its Insulation Characteristics Analysis

    Institute of Scientific and Technical Information of China (English)

    ZHANG Liu-chun; XIAO Deng-ming; ZHANG Dong; WU Bian-tao

    2008-01-01

    In c-C4F8 and c-C4F8/CO2 mixtures, the swarm parameters including ionization coefficient, attachment coefficient and effective ionization coefficient were obtained at the ratio of the electric field strength to the gas density between 150-550 Td by the steady-state Townsend (SST) method. Static breakdown voltages at each ratio were also measured at the SST condition. The limiting field strengths were obtained by two methods:computing the density-normalized effective ionization coefficient as a function of the overall density-reduced electric field strength; and measuring static breakdown voltages as a function of the product of gas density and electrode separation. Good agreement was obtained by these two methods, which ensures the correctness of the former method. The limiting field strengths of c-C4F8 and c-C4F8/CO2 mixtures were compared with those ofpure SF6, SF6/CO2 mixtures and pure c-C4Fs. It is found that buffer gas CO2 does not reduce the limiting field strengths of c-C4F8 greatly, the limiting field strengths of c-C4F8/CO2 mixtures are higher than those of SF6/CO2 mixtures or even pure SF6, and so c-C4F8/CO2 mixtures are suggested to be possible substitutes for SF6.

  7. 慢性失功移植肾组织中C4d的表达与意义%Expression and significance of complement split product C4d in chronic function loss renal allograft

    Institute of Scientific and Technical Information of China (English)

    赵亚昆; 祝清国; 仇宇; 张川; 刘伟; 高治忠

    2012-01-01

    x Objective To observe the expression of C4d in renal allograft with chronic function loss and to investigate the relationship of chronic active antibody-mediated rejection and chronic allograft function loss. Methods Twenty-seven renal allografts of chronic graft injury that had been proved by pathology were analyzed by immunohistochemistry and indirect immunofluores-cence was used to observe the deposition of complement split product C4d in peritubular capillaries. The relationship of C4d and transplant-related factors and prognosis of renal allograft were analyzed. Results All of the 27 patients, 55.6% were C4d deposition positive. The patients with C4d positive sharply demonstrated glomerular basement membrane layered and end-arterium incrassation, while C4d deposition negative group primary demonstrated that tubular atrophy, arteriolar intimal fibrosis and interstitial fibrosis. Incidence of presensitization ( PRA > 10% )and acute rejection were higher in patients with C4d positive, and onset of abnormal allograft function were also earlier in these patients than those of C4d deposition negative group (P <0. 05). Conclusion Chronic active antibody-mediated rejection is involved in chronic' renal function loss after the renal transplantation. Deposition of complement split product C4d in peritubular capillaries is very useful in diagnosis and treatment of antibody mediated rejection.%目的 观察慢性失功移植肾组织中C4d的表达,探讨抗体介导的慢性活动性排斥反应与慢性移植肾失功的关系.方法 对本院27例经病理证实为慢性移植物损伤的移植肾组织行免疫组化或间接免疫荧光法检测肾小管周围毛细血管中C4d的沉积,分析C4d沉积与移植相关因素和移植肾预后的关系.结果 27例患者中,C4d阳性率为55.6%.C4d沉积阳性组病理改变以肾小球基底膜分层和动脉内膜增厚为主,C4d沉积阴性组以肾小管萎缩和间质纤维化为主;C4d沉积阳

  8. Expression of C4.4A in precursor lesions of pulmonary adenocarcinoma and squamous cell carcinoma

    DEFF Research Database (Denmark)

    Jacobsen, Benedikte; Santoni-Rugiu, Eric; Illemann, Martin;

    2012-01-01

    The protein C4.4A, a structural homologue of the urokinase-type plasminogen activator receptor, is a potential new biomarker in non-small cell lung cancer, with high levels of expression recently shown to correlate to poor survival of adenocarcinoma patients. In this study, C4.4A immunoreactivity...... in precursor lesions of lung squamous cell carcinoma and adenocarcinoma was investigated by stainings with a specific anti-C4.4A antibody. In the transformation from normal bronchial epithelium to squamous cell carcinoma, C4.4A was weakly expressed in basal cell hyperplasia but dramatically increased...... in squamous metaplasia. This was confined to the cell membrane and sustained in dysplasia, carcinoma in situ, and the invasive carcinoma. The induction of C4.4A already at the stage of hyperplasia could indicate that it is a marker of very early squamous differentiation, which aligns well with our earlier...

  9. Classification of C3 and C4 Vegetation Types Using MODIS and ETM+ Blended High Spatio-Temporal Resolution Data

    Directory of Open Access Journals (Sweden)

    Xiaolong Liu

    2015-11-01

    Full Text Available The distribution of C3 and C4 vegetation plays an important role in the global carbon cycle and climate change. Knowledge of the distribution of C3 and C4 vegetation at a high spatial resolution over local or regional scales helps us to understand their ecological functions and climate dependencies. In this study, we classified C3 and C4 vegetation at a high resolution for spatially heterogeneous landscapes. First, we generated a high spatial and temporal land surface reflectance dataset by blending MODIS (Moderate Resolution Imaging Spectroradiometer and ETM+ (Enhanced Thematic Mapper Plus data. The blended data exhibited a high correlation (R2 = 0.88 with the satellite derived ETM+ data. The time-series NDVI (Normalized Difference Vegetation Index data were then generated using the blended high spatio-temporal resolution data to capture the phenological differences between the C3 and C4 vegetation. The time-series NDVI revealed that the C3 vegetation turns green earlier in spring than the C4 vegetation, and senesces later in autumn than the C4 vegetation. C4 vegetation has a higher NDVI value than the C3 vegetation during summer time. Based on the distinguished characteristics, the time-series NDVI was used to extract the C3 and C4 classification features. Five features were selected from the 18 classification features according to the ground investigation data, and subsequently used for the C3 and C4 classification. The overall accuracy of the C3 and C4 vegetation classification was 85.75% with a kappa of 0.725 in our study area.

  10. Counting viruses and bacteria in photosynthetic microbial mats

    NARCIS (Netherlands)

    C. Carreira; M. Staal; M. Middelboe; C.P.D. Brussaard

    2015-01-01

    Viral abundances in benthic environments are the highest found in aquatic systems. Photosynthetic microbial mats represent benthic environments with high microbial activity and possibly high viral densities, yet viral abundances have not been examined in such systems. Existing extraction procedures

  11. Towards autotrophic tissue engineering: Photosynthetic gene therapy for regeneration.

    Science.gov (United States)

    Chávez, Myra Noemi; Schenck, Thilo Ludwig; Hopfner, Ursula; Centeno-Cerdas, Carolina; Somlai-Schweiger, Ian; Schwarz, Christian; Machens, Hans-Günther; Heikenwalder, Mathias; Bono, María Rosa; Allende, Miguel L; Nickelsen, Jörg; Egaña, José Tomás

    2016-01-01

    The use of artificial tissues in regenerative medicine is limited due to hypoxia. As a strategy to overcome this drawback, we have shown that photosynthetic biomaterials can produce and provide oxygen independently of blood perfusion by generating chimeric animal-plant tissues during dermal regeneration. In this work, we demonstrate the safety and efficacy of photosynthetic biomaterials in vivo after engraftment in a fully immunocompetent mouse skin defect model. Further, we show that it is also possible to genetically engineer such photosynthetic scaffolds to deliver other key molecules in addition to oxygen. As a proof-of-concept, biomaterials were loaded with gene modified microalgae expressing the angiogenic recombinant protein VEGF. Survival of the algae, growth factor delivery and regenerative potential were evaluated in vitro and in vivo. This work proposes the use of photosynthetic gene therapy in regenerative medicine and provides scientific evidence for the use of engineered microalgae as an alternative to deliver recombinant molecules for gene therapy.

  12. Full quantum dynamics of the electronic coupling between photosynthetic pigments

    CERN Document Server

    Oviedo, María Belén

    2015-01-01

    From studying the time evolution of the single electron density matrix within a density functional tight-binding formalism we study in a fully atomistic picture the electronic excitation transfer between two photosynthetic pigments in real time. This time-dependent quantum dynamics is based on fully atomistic structural models of the photosynthetic pigment. We analyze the dependence of the electronic excitation transfer with distance and orientation between photosynthetic pigments. We compare the results obtained from full quantum dynamics with analytical ones, based on a two level system model were the interaction between the pigments is dipolar. We observed that even when the distance of the photosynthetic pigment is about $30$ \\AA\\ the deviation of the dipolarity is of about $15$ percent.

  13. Photosynthetic efficiency of Chlamydomonas reinhardtii in flashing light

    NARCIS (Netherlands)

    Vejrazka, C.; Janssen, M.G.J.; Streefland, M.; Wijffels, R.H.

    2011-01-01

    Efficient light to biomass conversion in photobioreactors is crucial for economically feasible microalgae production processes. It has been suggested that photosynthesis is enhanced in short light path photobioreactors by mixing-induced flashing light regimes. In this study, photosynthetic efficienc

  14. Functional Implications of Photosystem II Crystal Formation in Photosynthetic Membranes

    NARCIS (Netherlands)

    Tietz, Stefanie; Puthiyaveetil, Sujith; Enlow, Heather M; Yarbrough, Robert; Wood, Magnus; Semchonok, Dmitry A; Lowry, Troy; Li, Zhirong; Jahns, Peter; Boekema, Egbert J; Lenhert, Steven; Niyogi, Krishna K; Kirchhoff, Helmut

    2015-01-01

    The structural organization of proteins in biological membranes can affect their function. Photosynthetic thylakoid membranes in chloroplasts have the remarkable ability to change their supramolecular organization between disordered and semicrystalline states. Although the change to the semicrystall

  15. Production of bioplastics and hydrogen gas by photosynthetic microorganisms

    Science.gov (United States)

    Yasuo, Asada; Masato, Miyake; Jun, Miyake

    1998-03-01

    Our efforts have been aimed at the technological basis of photosynthetic-microbial production of materials and an energy carrier. We report here accumulation of poly-(3-hydroxybutyrate) (PHB), a raw material of biodegradable plastics and for production of hydrogen gas, and a renewable energy carrier by photosynthetic microorganisms (tentatively defined as cyanobacteria plus photosynthetic bateria, in this report). A thermophilic cyanobacterium, Synechococcus sp. MA19 that accumulates PHB at more than 20% of cell dry wt under nitrogen-starved conditions was isolated and microbiologically identified. The mechanism of PHB accumulation was studied. A mesophilic Synechococcus PCC7942 was transformed with the genes encoding PHB-synthesizing enzymes from Alcaligenes eutrophus. The transformant accumulated PHB under nitrogen-starved conditions. The optimal conditions for PHB accumulation by a photosynthetic bacterium grown on acetate were studied. Hydrogen production by photosynthetic microorganisms was studied. Cyanobacteria can produce hydrogen gas by nitrogenase or hydrogenase. Hydrogen production mediated by native hydrogenase in cyanobacteria was revealed to be in the dark anaerobic degradation of intracellular glycogen. A new system for light-dependent hydrogen production was targeted. In vitro and in vivo coupling of cyanobacterial ferredoxin with a heterologous hydrogenase was shown to produce hydrogen under light conditions. A trial for genetic trasformation of Synechococcus PCC7942 with the hydrogenase gene from Clostridium pasteurianum is going on. The strong hydrogen producers among photosynthetic bacteria were isolated and characterized. Co-culture of Rhodobacter and Clostriumdium was applied to produce hydrogen from glucose. Conversely in the case of cyanobacteria, genetic regulation of photosynthetic proteins was intended to improve conversion efficiency in hydrogen production by the photosynthetic bacterium, Rhodobacter sphaeroides RV. A mutant acquired by

  16. Synthesis, crystal structure and antioxidant evaluation of C-4-acetamidophenylcalix[4]pyrogallolarene

    Energy Technology Data Exchange (ETDEWEB)

    Abosadiya, Hamza M.; Hasbullah, Siti Aishah; Yamin, Bohari M. [School of Chemical Sciences and Food Technology, Universiti Kebangsaan Malaysia, Bangi 43600, Selangor (Malaysia)

    2015-09-25

    C-4-acetamidophenylcalix[4]pyrogallolarene was synthesized by an acid catalyzed condensation reaction of pyrogallol with 4-acetamidobenzaldehyde. The compound was characterized by IR, {sup 1}H and {sup 13}C NMR spectroscopy. Single crystal X-ray analysis revealed that the molecule crystallized in a triclinic system with space group Pī and the unit cell dimensions a= 12.2948(16) Å, b= 13.4423(17) Å, c= 13.5906(18) Å, α =107.549(4)°, β =102.034(4)°, γ =90.535(4)°, Z= 1 and V= 2088.2(5) Å{sup 3}. The macrocyclic calix adopts a chair (C{sub 2h}) conformation and the molecule is associated with eight DMSO molecules of crystallization. Antioxidant test by DPPH method showed that the compound exhibits good antioxidant activity of about 72%.

  17. C-4 Gem-Dimethylated Oleanes of Gymnema sylvestre and Their Pharmacological Activities

    Directory of Open Access Journals (Sweden)

    Giovanni Di Fabio

    2013-12-01

    Full Text Available Gymnema sylvestre R. Br., one of the most important medicinal plants of the Asclepiadaceae family, is a herb distributed throughout the World, predominantly in tropical countries. The plant, widely used for the treatment of diabetes and as a diuretic in Indian proprietary medicines, possesses beneficial digestive, anti-inflammatory, hypoglycemic and anti-helmentic effects. Furthermore, it is believed to be useful in the treatment of dyspepsia, constipation, jaundice, hemorrhoids, cardiopathy, asthma, bronchitis and leucoderma. A literature survey revealed that some other notable pharmacological activities of the plant such as anti-obesity, hypolipidemic, antimicrobial, free radical scavenging and anti-inflammatory properties have been proven too. This paper aims to summarize the chemical and pharmacological reports on a large group of C-4 gem-dimethylated pentacyclic triterpenoids from Gymnema sylvestre.

  18. Simulation of the reflected blast wave from a C-4 charge

    Science.gov (United States)

    Howard, W. Michael; Kuhl, Allen L.; Tringe, Joseph

    2012-03-01

    The reflection of a blast wave from a C4 charge detonated above a planar surface is simulated with our ALE3D code. We used a finely-resolved, fixed Eulerian 2-D mesh (167 μm per cell) to capture the detonation of the charge, the blast wave propagation in nitrogen, and its reflection from the surface. The thermodynamic properties of the detonation products and nitrogen were specified by the Cheetah code. A programmed-burn model was used to detonate the charge at a rate based on measured detonation velocities. Computed pressure histories are compared with pressures measured by Kistler 603B piezoelectric gauges at 7 ranges (GR = 0, 5.08, 10.16, 15.24, 20.32, 25.4, and 30.48 cm) along the reflecting surface. Computed and measured waveforms and positive-phase impulses were similar, except at close-in ranges (GR < 5 cm), which were dominated by jetting effects.

  19. Theoretical Studies on Structures and Stabilities of C4H2+ Isomers

    Institute of Scientific and Technical Information of China (English)

    ZHAO Ying; WAN Su-qin; LIU Hui-ling; HUANG Xu-ri; SUN Chia-chung

    2013-01-01

    The structures,energies,stabilities and spectroscopies of doublet C4H2+ cations were explored at the DFT/B3LYP/6-311G(d,p),CCSD(T)/6-311+G(2df,2pd)(single-point),and G3B3 levels.Ten minimum isomers including the chainlike,three-member-ring,and four-member-ring structures are interconverted by means of 15 interconversion transition states.The potential energy surface was investigated.At the CCSD(T)/6-311+G(2df,2pd) and G3B3 levels,the global minimum isomer was found to be a linear HCCCCH.The structures of the stable isomer and its relevant transition state are further optimized at the QCISD/6-311G(d,p) level.The bonding nature and structure of isomer HCCCCH were analyzed.

  20. Recent developments of C-4 substituted coumarin derivatives as anticancer agents.

    Science.gov (United States)

    Dandriyal, Jyoti; Singla, Ramit; Kumar, Manvendra; Jaitak, Vikas

    2016-08-25

    Cancer is a prominent cause of death in global. Currently, the numbers of drugs that are in clinical practice are having a high prevalence of side effect and multidrug resistance. Researchers have made an attempt to expand a suitable anticancer drug that has no MDR and side effect. Coumarin scaffold became an attractive subject due to their broad spectrum of pharmacological activities. Coumarin derivatives extensively explored for anticancer activities as it possesses minimum side effect along with multi-drug reversal activity. Coumarin derivatives can act by various mechanisms on different tumor cell lines depending on substitution pattern of the core structure of coumarin. Substitution on coumarin nucleus leads to the search for more potent compounds. In this review, we have made an effort to give a synthetic strategy for the preparation of C-4 substituted coumarin derivatives as anticancer agents based on their mechanism of action and also discuss the SAR of the most active compound.

  1. Synthesis, crystal structure and antioxidant evaluation of C-4-acetamidophenylcalix[4]pyrogallolarene

    Science.gov (United States)

    Abosadiya, Hamza M.; Hasbullah, Siti Aishah; Yamin, Bohari M.

    2015-09-01

    C-4-acetamidophenylcalix[4]pyrogallolarene was synthesized by an acid catalyzed condensation reaction of pyrogallol with 4-acetamidobenzaldehyde. The compound was characterized by IR, 1H and 13C NMR spectroscopy. Single crystal X-ray analysis revealed that the molecule crystallized in a triclinic system with space group Pī and the unit cell dimensions a= 12.2948(16) Å, b= 13.4423(17) Å, c= 13.5906(18) Å, α =107.549(4)°, β =102.034(4)°, γ =90.535(4)°, Z= 1 and V= 2088.2(5) Å3. The macrocyclic calix adopts a chair (C2h) conformation and the molecule is associated with eight DMSO molecules of crystallization. Antioxidant test by DPPH method showed that the compound exhibits good antioxidant activity of about 72%.

  2. Synthesis, crystal structure and antioxidant evaluation of C-4-acetamidophenylcalix[4]pyrogallolarene

    International Nuclear Information System (INIS)

    C-4-acetamidophenylcalix[4]pyrogallolarene was synthesized by an acid catalyzed condensation reaction of pyrogallol with 4-acetamidobenzaldehyde. The compound was characterized by IR, 1H and 13C NMR spectroscopy. Single crystal X-ray analysis revealed that the molecule crystallized in a triclinic system with space group Pī and the unit cell dimensions a= 12.2948(16) Å, b= 13.4423(17) Å, c= 13.5906(18) Å, α =107.549(4)°, β =102.034(4)°, γ =90.535(4)°, Z= 1 and V= 2088.2(5) Å3. The macrocyclic calix adopts a chair (C2h) conformation and the molecule is associated with eight DMSO molecules of crystallization. Antioxidant test by DPPH method showed that the compound exhibits good antioxidant activity of about 72%

  3. A novel potassium channel in photosynthetic cyanobacteria.

    Directory of Open Access Journals (Sweden)

    Manuela Zanetti

    Full Text Available Elucidation of the structure-function relationship of a small number of prokaryotic ion channels characterized so far greatly contributed to our knowledge on basic mechanisms of ion conduction. We identified a new potassium channel (SynK in the genome of the cyanobacterium Synechocystis sp. PCC6803, a photosynthetic model organism. SynK, when expressed in a K(+-uptake-system deficient E. coli strain, was able to recover growth of these organisms. The protein functions as a potassium selective ion channel when expressed in Chinese hamster ovary cells. The location of SynK in cyanobacteria in both thylakoid and plasmamembranes was revealed by immunogold electron microscopy and Western blotting of isolated membrane fractions. SynK seems to be conserved during evolution, giving rise to a TPK (two-pore K(+ channel family member which is shown here to be located in the thylakoid membrane of Arabidopsis. Our work characterizes a novel cyanobacterial potassium channel and indicates the molecular nature of the first higher plant thylakoid cation channel, opening the way to functional studies.

  4. Photosynthetically active sunlight at high southern latitudes.

    Science.gov (United States)

    Frederick, John E; Liao, Yixiang

    2005-01-01

    A network of scanning spectroradiometers has acquired a multiyear database of visible solar irradiance, covering wavelengths from 400 to 600 nm, at four sites in the high-latitude Southern Hemisphere, from 55 degrees S to 90 degrees S. Monthly irradiations computed from the hourly measurements reveal the character of the seasonal cycle and illustrate the role of cloudiness as functions of latitude. Near summer solstice, the combined influences of solar elevation and the duration of daylight would produce a monthly irradiation with little latitude dependence under clear skies. However, the attenuation associated with local cloudiness varies geographically, with the greatest effect at the most northern locations, Ushuaia, Argentina and Palmer Station on the Antarctic Peninsula. Near summer solstice, the South Pole experiences the largest monthly irradiation of the sites studied, where relatively clear skies contribute to this result. Scaling factors derived from radiative-transfer calculations combined with the measured 400-600 nm irradiances allow estimating irradiances integrated over the wavelength band 400-700 nm. This produces a climatology of photosynthetically active radiation for each month of the year at each site. PMID:15689179

  5. ENHANCED PRACTICAL PHOTOSYNTHETIC CO2 MITIGATION

    Energy Technology Data Exchange (ETDEWEB)

    Dr. David J. Bayless; Dr. Morgan Vis; Dr. Gregory Kremer; Dr. Michael Prudich; Dr. Keith Cooksey; Dr. Jeff Muhs

    2001-01-16

    This is the first quarterly report of the project Enhanced Practical Photosynthetic CO{sub 2} Mitigation. The official project start date, 10/02/2000, was delayed until 10/31/2000 due to an intellectual property dispute that was resolved. However, the delay forced a subsequent delay in subcontracting with Montana State University, which then delayed obtaining a sampling permit from Yellowstone National Park. However, even with these delays, the project moved forward with some success. Accomplishments for this quarter include: Culturing of thermophilic organisms from Yellowstone; Testing of mesophilic organisms in extreme CO{sub 2} conditions; Construction of a second test bed for additional testing; Purchase of a total carbon analyzer dedicated to the project; Construction of a lighting container for Oak Ridge National Laboratory optical fiber testing; Modified lighting of existing test box to provide more uniform distribution; Testing of growth surface adhesion and properties; Experimentation on water-jet harvesting techniques; and Literature review underway regarding uses of biomass after harvesting. Plans for next quarter's work and an update on the project's web page are included in the conclusions.

  6. ENHANCED PRACTICAL PHOTOSYNTHETIC CO2 MITIGATION

    Energy Technology Data Exchange (ETDEWEB)

    Dr. Gregory Kremer; Dr. David J. Bayless; Dr. Morgan Vis; Dr. Michael Prudich; Dr. Keith Cooksey; Dr. Jeff Muhs

    2001-07-25

    This quarterly report documents significant achievements in the Enhanced Practical Photosynthetic CO{sub 2} Mitigation project during the period from 4/03/2001 through 7/02/2001. Most of the achievements are milestones in our efforts to complete the tasks and subtasks that constitute the project objectives. Note that this version of the quarterly technical report is a revision to add the reports from subcontractors Montana State and Oak Ridge National Laboratories The significant accomplishments for this quarter include: Development of an experimental plan and initiation of experiments to create a calibration curve that correlates algal chlorophyll levels with carbon levels (to simplify future experimental procedures); Completion of debugging of the slug flow reactor system, and development of a plan for testing the pressure drop of the slug flow reactor; Design and development of a new bioreactor screen design which integrates the nutrient delivery drip system and the harvesting system; Development of an experimental setup for testing the new integrated drip system/harvesting system; Completion of model-scale bioreactor tests examining the effects of CO{sub 2} concentration levels and lighting levels on Nostoc 86-3 growth rates; Completion of the construction of a larger model-scale bioreactor to improve and expand testing capabilities and initiation of tests; Substantial progress on construction of a pilot-scale bioreactor; and Preliminary economic analysis of photobioreactor deployment. Plans for next quarter's work are included in the conclusions. A preliminary economic analysis is included as an appendix.

  7. Pathogenicity ofKlebsiella pneumonia(KpC4) infecting maize and mice

    Institute of Scientific and Technical Information of China (English)

    HUANG Min; HE Yue-qiu; LIN Li; WU Yi-xin; Honhing Ho; HE Peng-fei; LI Guo-zhi; HE Peng-bo; XIONG Guo-ru; YUAN Yuan

    2016-01-01

    Recently, a new bacterial top rot disease of maize has frequently appeared in many areas of Yunnan Province, China. The pathogen of the disease was identiifed asKlebsiela pneumoniae(KpC4), which is wel known to cause pulmonary and urinary diseases in humans and animals and occasionaly exists as a harmless endophyte in plants. To evaluate the viru-lence of the maize pathogen to maize and mice, we inoculated maize and mice with routine inoculation and intraperitoneal injection respectively according to Koch’s postulates. The results showed that KpC4 and the clinical strainK. pneumoniae 138 (Kp138) were al highly pathogenic to maize and mice and the strain re-isolated from diseased mice also caused typical top rot symptoms on maize by artiifcial inoculation. It is highlighting that a seemingly dedicated human/animal pathogen could cause plant disease. This is the ifrst report ofK. pneumoniae, an opportunistic pathogen of human/animal , could infect maize and mice. The ifndings serve as an alert to plant, medical and veterinarian scientists regarding a potentialy dangerous bacterial pathogen infecting both plants and animals/humans. The maize plants in the ifeld could serve as a reservoir forK. pneumoniae which might infect animals and probably humans when conditions are favorable. The new ifndings not only are signiifcant in the developing control strategy for the new disease in Yunnan, but also serve as a starting point for further studies on the mechanism of pathogenesis and epidemiology ofK. pneumoniae.

  8. Production of C4 and C5 branched-chain alcohols by engineered Escherichia. coli.

    Science.gov (United States)

    Chen, Xiaoyan; Xu, Jingliang; Yang, Liu; Yuan, Zhenhong; Xiao, Shiyuan; Zhang, Yu; Liang, Cuiyi; He, Minchao; Guo, Ying

    2015-11-01

    Higher alcohols, longer chain alcohols, contain more than 3 carbon atoms, showed close energy advantages as gasoline, and were considered as the next generation substitution for chemical fuels. Higher alcohol biosynthesis by native microorganisms mainly needs gene expression of heterologous keto acid decarboxylase and alcohol dehydrogenases. In the present study, branched-chain α-keto acid decarboxylase gene from Lactococcus lactis subsp. lactis CICC 6246 (Kivd) and alcohol dehydrogenases gene from Zymomonas mobilis CICC 41465 (AdhB) were transformed into Escherichia coli for higher alcohol production. SDS-PAGE results showed these two proteins were expressed in the recombinant strains. The resulting strain was incubated in LB medium at 37 °C in Erlenmeyer flasks and much more 3-methyl-1-butanol (104 mg/L) than isobutanol (24 mg/L) was produced. However, in 5 g/L glucose-containing medium, the production of two alcohols was similar, 156 and 161 mg/L for C4 (isobutanol) and C5 (3-methyl-1-butanol) alcohol, respectively. Effects of fermentation factors including temperature, glucose content, and α-keto acid on alcohol production were also investigated. The increase of glucose content and the adding of α-keto acids facilitated the production of C4 and C5 alcohols. The enzyme activities of pure Kivd on α-ketoisovalerate and α-ketoisocaproate were 26.77 and 21.24 μmol min(-1) mg(-1), respectively. Due to its ability on decarboxylation of α-ketoisovalerate and α-ketoisocaproate, the recombinant E. coli strain showed potential application on isoamyl alcohol and isobutanol production.

  9. Solubility of alkali metal halides in the ionic liquid [C4C1im][OTf].

    Science.gov (United States)

    Kuzmina, O; Bordes, E; Schmauck, J; Hunt, P A; Hallett, J P; Welton, T

    2016-06-28

    The solubilities of the metal halides LiF, LiCl, LiBr, LiI, NaF, NaCl, NaBr, NaI, KF, KCl, KBr, KI, RbCl, CsCl, CsI, were measured at temperatures ranging from 298.15 to 378.15 K in the ionic liquid 1-butyl-3-methylimidazolium trifluoromethanesulfonate ([C4C1im][OTf]). Li(+), Na(+) and K(+) salts with anions matching the ionic liquid have also been investigated to determine how well these cations dissolve in [C4C1im][OTf]. This study compares the influence of metal cation and halide anion on the solubility of salts within this ionic liquid. The highest solubility found was for iodide salts, and the lowest solubility for the three fluoride salts. There is no outstanding difference in the solubility of salts with matching anions in comparison to halide salts. The experimental data were correlated employing several phase equilibria models, including ideal mixtures, van't Hoff, the λh (Buchowski) equation, the modified Apelblat equation, and the non-random two-liquid model (NRTL). It was found that the van't Hoff model gave the best correlation results. On the basis of the experimental data the thermodynamic dissolution parameters (ΔH, ΔS, and ΔG) were determined for the studied systems together with computed gas phase metathesis parameters. Dissolution depends on the energy difference between enthalpies of fusion and dissolution of the solute salt. This demonstrates that overcoming the lattice energy of the solid matrix is the key to the solubility of inorganic salts in ionic liquids. PMID:27264676

  10. Electrochemical and optical studies of model photosynthetic systems

    Energy Technology Data Exchange (ETDEWEB)

    1992-01-15

    The objective of this research is to obtain a better understanding of the relationship between the structural organization of photosynthetic pigments and their spectroscopic and electrochemical properties. Defined model systems were studied first. These included the least ordered (solutions) through the most highly ordered (Langmuir-Blodgett (LB) monolayers and self-assembled monolayers) systems containing BChl, BPheo, and UQ. Molecules other than the photosynthetic pigments and quinones were also examined, including chromophores (i.e. surface active cyanine dyes and phtahlocyanines) an redox active compounds (methyl viologen (MV) and surfactant ferrocenes), in order to develop the techniques needed to study the photosynthetic components. Because the chlorophylls are photosensitive and labile, it was easier first to develop procedures using stable species. Three different techniques were used to characterize these model systems. These included electrochemical techniques for determining the standard oxidation and reduction potentials of the photosynthetic components as well as methods for determining the heterogeneous electron transfer rate constants for BChl and BPheo at metal electrodes (Pt and Au). Resonance Raman (RR) and surface enhanced resonance Raman (SERR) spectroscopy were used to determine the spectra of the photosynthetic pigments and model compounds. SERRS was also used to study several types of photosynthetic preparations.

  11. Rice Photosynthetic Productivity and PSII Photochemistry under Nonflooded Irrigation

    Directory of Open Access Journals (Sweden)

    Haibing He

    2014-01-01

    Full Text Available Nonflooded irrigation is an important water-saving rice cultivation technology, but little is known on its photosynthetic mechanism. The aims of this work were to investigate photosynthetic characteristics of rice during grain filling stage under three nonflooded irrigation treatments: furrow irrigation with plastic mulching (FIM, furrow irrigation with nonmulching (FIN, and drip irrigation with plastic mulching (DI. Compared with the conventional flooding (CF treatment, those grown in the nonflooded irrigation treatments showed lower net photosynthetic rate (PN, lower maximum quantum yield (Fv/Fm, and lower effective quantum yield of PSII photochemistry (ΦPSII. And the poor photosynthetic characteristics in the nonflooded irrigation treatments were mainly attributed to the low total nitrogen content (TNC. Under non-flooded irrigation, the PN, Fv/Fm, and ΦPSII significantly decreased with a reduction in the soil water potential, but these parameters were rapidly recovered in the DI and FIM treatments when supplementary irrigation was applied. Moreover, The DI treatment always had higher photosynthetic productivity than the FIM and FIN treatments. Grain yield, matter translocation, and dry matter post-anthesis (DMPA were the highest in the CF treatment, followed by the DI, FIM, and FIN treatments in turn. In conclusion, increasing nitrogen content in leaf of rice plants could be a key factor to improve photosynthetic capacity in nonflooded irrigation.

  12. A systematic review of the role of C4d in the diagnosis of acute antibody-mediated rejection.

    Science.gov (United States)

    Sapir-Pichhadze, Ruth; Curran, Simon P; John, Rohan; Tricco, Andrea C; Uleryk, Elizabeth; Laupacis, Andreas; Tinckam, Kathryn; Sis, Banu; Beyene, Joseph; Logan, Alexander G; Kim, S Joseph

    2015-01-01

    In this study, we conducted a systematic review of the literature to re-evaluate the role of C4d in the diagnosis of acute antibody-mediated rejection of kidney allografts. Electronic databases were searched until September 2013. Eligible studies allowed derivation of diagnostic tables for the performance of C4d by immunofluorescence or immunohistochemistry with comparison to histopathological features of acute antibody-mediated rejection and/or donor-specific antibody (DSA) assays. Of 3492 unique abstracts, 29 studies encompassing 3485 indication and 868 surveillance biopsies were identified. Assessment of C4d by immunofluorescence and immunohistochemistry exhibited slight to moderate agreement with glomerulitis, peritubular capillaritis, solid-phase DSA assays, DSA with glomerulitis, and DSA with peritubular capillaritis. The sensitivity and specificity of C4d varied as a function of C4d and comparator test thresholds. Prognostically, the presence of C4d was associated with inferior allograft survival compared with DSA or histopathology alone. Thus, our findings support the presence of complement-dependent and -independent phenotypes of acute antibody-mediated rejection. Whether the presence of C4d in combination with histopathology or DSA should be considered for the diagnosis of acute antibody-mediated rejection warrants further study. PMID:24827778

  13. Elevated levels of the complement activation product C4d in bronchial fluids for the diagnosis of lung cancer.

    Directory of Open Access Journals (Sweden)

    Daniel Ajona

    Full Text Available Molecular markers in bronchial fluids may contribute to the diagnosis of lung cancer. We previously observed a significant increase of C4d-containing complement degradation fragments in bronchoalveolar lavage (BAL supernatants from lung cancer patients in a cohort of 50 cases and 22 controls (CUN cohort. The present study was designed to determine the diagnostic performance of these complement fragments (hereinafter jointly referred as C4d in bronchial fluids. C4d levels were determined in BAL supernatants from two independent cohorts: the CU cohort (25 cases and 26 controls and the HUVR cohort (60 cases and 98 controls. A series of spontaneous sputum samples from 68 patients with lung cancer and 10 controls was also used (LCCCIO cohort. Total protein content, complement C4, complement C5a, and CYFRA 21-1 were also measured in all cohorts. C4d levels were significantly increased in BAL samples from lung cancer patients. The area under the ROC curve was 0.82 (95%CI = 0.71-0.94 and 0.67 (95%CI = 0.58-0.76 for the CU and HUVR cohorts, respectively. In addition, unlike the other markers, C4d levels in BAL samples were highly consistent across the CUN, CU and HUVR cohorts. Interestingly, C4d test markedly increased the sensitivity of bronchoscopy in the two cohorts in which cytological data were available (CUN and HUVR cohorts. Finally, in the LCCCIO cohort, C4d levels were higher in sputum supernatants from patients with lung cancer (area under the ROC curve: 0.7; 95%CI = 0.56-0.83. In conclusion, C4d is consistently elevated in bronchial fluids from lung cancer patients and may be used to improve the diagnosis of the disease.

  14. Elevated levels of the complement activation product C4d in bronchial fluids for the diagnosis of lung cancer.

    Science.gov (United States)

    Ajona, Daniel; Razquin, Cristina; Pastor, Maria Dolores; Pajares, Maria Jose; Garcia, Javier; Cardenal, Felipe; Fleischhacker, Michael; Lozano, Maria Dolores; Zulueta, Javier J; Schmidt, Bernd; Nadal, Ernest; Paz-Ares, Luis; Montuenga, Luis M; Pio, Ruben

    2015-01-01

    Molecular markers in bronchial fluids may contribute to the diagnosis of lung cancer. We previously observed a significant increase of C4d-containing complement degradation fragments in bronchoalveolar lavage (BAL) supernatants from lung cancer patients in a cohort of 50 cases and 22 controls (CUN cohort). The present study was designed to determine the diagnostic performance of these complement fragments (hereinafter jointly referred as C4d) in bronchial fluids. C4d levels were determined in BAL supernatants from two independent cohorts: the CU cohort (25 cases and 26 controls) and the HUVR cohort (60 cases and 98 controls). A series of spontaneous sputum samples from 68 patients with lung cancer and 10 controls was also used (LCCCIO cohort). Total protein content, complement C4, complement C5a, and CYFRA 21-1 were also measured in all cohorts. C4d levels were significantly increased in BAL samples from lung cancer patients. The area under the ROC curve was 0.82 (95%CI = 0.71-0.94) and 0.67 (95%CI = 0.58-0.76) for the CU and HUVR cohorts, respectively. In addition, unlike the other markers, C4d levels in BAL samples were highly consistent across the CUN, CU and HUVR cohorts. Interestingly, C4d test markedly increased the sensitivity of bronchoscopy in the two cohorts in which cytological data were available (CUN and HUVR cohorts). Finally, in the LCCCIO cohort, C4d levels were higher in sputum supernatants from patients with lung cancer (area under the ROC curve: 0.7; 95%CI = 0.56-0.83). In conclusion, C4d is consistently elevated in bronchial fluids from lung cancer patients and may be used to improve the diagnosis of the disease. PMID:25799154

  15. Simulation of Information Superiority Value Chain Model of C4ISR System Based on System Dynamics%系统动力学的C4ISR系统信息优势价值链模型仿真

    Institute of Scientific and Technical Information of China (English)

    李小全; 蓝鹏飞; 程懿

    2011-01-01

    To obtain informtiaon superiority is the core of Net-Center War(NCW), C4ISR system is the basis of obtaining information superiority, decision-making superiority and action superiority in the NCW. Firstly, information superiority value chain of C4ISR system is analyzed based on C4ISR system work process in this paper. Secondly, according to the building process of battlefield situation perception information superiority value chain, C4ISR system information superiority value chain System Dynamics (SD) confront model has been established using SD theory. At last, an combat example is taken for an example to study the simulation model, the results show that this method is feasible and efficiency to study complex military information system.%实现信息优势是网络中心战的核心,C4ISR系统是打赢网络中心战、夺取信息优势、决策优势和行动优势的客观基础.从C4ISR系统的工作流程出发,分析了C4ISR系统信息优势价值链,围绕战场态势感知信息优势价值链的生成过程,运用系统动力学方法建立了对抗条件下C4ISR系统信息优势价值链的SD模型,并结合作战背景对试验结果进行了仿真分析,验证了该方法研究复杂军事信息系统的可行性.

  16. Photosynthetic and Molecular Markers of CO2-mediated Photosynthetic Downregulation in Nodulated Alfalfa

    Institute of Scientific and Technical Information of China (English)

    (A)lvaro Sanz-Sáez; Gorka Erice; Iker Aranjuelo; Ricardo Aroca; Juan Manuel Ruíz-Lozano; Jone Aguirreolea; Juan José Irigoyen

    2013-01-01

    Elevated CO2 leads to a decrease in potential net photosynthesis in long-term experiments and thus to a reduction in potential growth.This process is known as photosynthetic downregulation.There is no agreement on the definition of which parameters are the most sensitive for detecting CO2 acclimation.In order to investigate the most sensitive photosynthetic and molecular markers of CO2 acclimation,the effects of elevated CO2,and associated elevated temperature were analyzed in alfalfa plants inoculated with different Sinorhizobium meliloti strains.Plants (Medicago sativa L.cv.Aragón) were grown in summer or autumn in temperature gradient greenhouses (TGG).At the end of the experiment,all plants showed acclimation in both seasons,especially under elevated summer temperatures.This was probably due to the lower nitrogen (N) availability caused by decreased N2-fixation under higher temperatures.Photosynthesis measured at growth CO2 concentration,rubisco in vitro activity and maximum rate of carboxylation were the most sensitive parameters for detecting downregulation.Severe acclimation was also related with decreases in leaf nitrogen content associated with declines in rubisco content (large and small subunits) and activity that resulted in a drop in photosynthesis.Despite the sensitivity of rubisco content as a marker of acclimation,it was not coordinated with gene expression,possibly due to a lag between gene transcription and protein translation.

  17. Best C4+ and C5+ Beams of the Kei2 ECR Ion Source%Kei2 ECR离子源C4+、C5+束流的最佳结果

    Institute of Scientific and Technical Information of China (English)

    A.G.Drentje; M.Muramatsu; A.Kitagawa

    2007-01-01

    With the prototype ECR ion source for the next carbon therapy facility in Japan a new series of measurements has been performed in order(a)to find the highest beam currents of C4+ ions,and(b)to study the effect of"special"gas-mixing by using a chemical compound as a feed gas. An isotopic effect has been found in a previous experiment:with deuterated methane(CD4 gas)the C5+ beam currents are about 10% higher than with regular methane(CH4 gas).For butane gases(C4D10 and C4H10 respectively)the isotopic effect for C5+ production is even stronger(>15%).For production of C4+ ions the isotopic effect appears to be absent.It turns out that the relative amount of carbon is much more important:acetylene gives 15%higher C4+ current than butane,which in turn gives about 10% higher C4+ ion currents than methane.

  18. 新疆荒漠地区C4植物的生态分布与区系分析%Geographic distribution and ecology of C4 plants in Xinjiang

    Institute of Scientific and Technical Information of China (English)

    冯缨; 段士民; 牟书勇; 赵莉; 赵兴华

    2012-01-01

    以前人工作为基础,对照已发表的C3/C4植物一览表,及近年国内外陆续发表的资料,综合整理出新疆荒漠地区已知的C4植物名录,共有14科63属的279种植物,同时归纳分析了279种C4。植物的分类地位、生活型、地理成分以及区系特点等方面。研究结果表明:藜科最多,其次是禾本科、莎草科、百合科和蓼科等等。所以该区的C4类型中被子植物的双子叶植物多于单子叶植物,蕨类植物和裸子植物就没有C4植物。1年生和多年生植物占优势,C4草本植物对环境的适应能力更强,是荒漠环境中植物适应自然的生物学策略,这与植物的进化密切相关。调查区内C4植物群落优势种占C4种的10%,其中125种C4植物生于沙丘中,103种C4植物生于盐生的环境,有56种C4植物生于湿地或水生的生境。证明C4植物能更好地适应干旱、盐渍等不良环境,体现了C4植物抗逆性强的生物学特点。同时依据中国种子植物属的分布区类型的划分方法,将新疆荒漠区C4植物划分为lO个分布区类型,表现出植物区系地理成分的多样性;其中地中海、西亚至中亚成分占优势有13属60种。区系地理反映了物种演化过程的历史气候、地质变化动态。利用C4植物的特点以期为对当前植物抗逆育种、解决我国西北地区的荒漠化问题均具有积极的意义,对今后该地区研究提供科学依据。%All the C4 plants in the arid area of Xinjiang were identified according to the stable carbon isotope ratios contents and some related literatures. There are 278 species of C4 plants from 66 genuses in 12 families. The tax- onomy, life form, geographical element and the areal - types of genera were accordingly analysis. The results showed that the families with most species orderly from Chenopodiaceae, Gramineae, Cyperaceae, Liliaceae, Polygonaceae etc. Among which,the dicotyledon more than

  19. All-atom semiclassical dynamics study of quantum coherence in photosynthetic Fenna-Matthews-Olson complex.

    Science.gov (United States)

    Kim, Hyun Woo; Kelly, Aaron; Park, Jae Woo; Rhee, Young Min

    2012-07-18

    Although photosynthetic pigment-protein complexes are in noisy environments, recent experimental and theoretical results indicate that their excitation energy transfer (EET) can exhibit coherent characteristics for over hundreds of femtoseconds. Despite the almost universal observations of the coherence to some degree, questions still remain regarding the detailed role of the protein and the extent of high-temperature coherence. Here we adopt a theoretical method that incorporates an all-atom description of the photosynthetic complex within a semiclassical framework in order to study EET in the Fenna-Matthews-Olson complex. We observe that the vibrational modes of the chromophore tend to diminish the coherence at the ensemble level, yet much longer-lived coherences may be observed at the single-complex level. We also observe that coherent oscillations in the site populations also commence within tens of femtoseconds even when the system is initially prepared in a non-oscillatory stationary state. We show that the protein acts to maintain the electronic couplings among the system of embedded chromophores. We also investigate the extent to which the protein's electrostatic modulation that disperses the chromophore electronic energies may affect the coherence lifetime. Further, we observe that even though mutation-induced disruptions in the protein structure may change the coupling pattern, a relatively strong level of coupling and associated coherence in the dynamics still remain. Finally, we demonstrate that thermal fluctuations in the chromophore couplings induce some redundancy in the coherent energy-transfer pathway. Our results indicate that a description of both chromophore coupling strengths and their fluctuations is crucial to better understand coherent EET processes in photosynthetic systems. PMID:22708971

  20. ENHANCED PRACTICAL PHOTOSYNTHETIC CO2 MITIGATION

    Energy Technology Data Exchange (ETDEWEB)

    Dr. David J. Bayless; Dr. Morgan Vis; Dr. Gregory Kremer; Dr. Michael Prudich; Dr. Keith Cooksey; Dr. Jeff Muhs

    2001-04-16

    This quarterly report documents significant achievements in the Enhanced Practical Photosynthetic CO{sub 2} Mitigation project during the period from 1/03/2001 through 4/02/2001. Many of the activities and accomplishments are continuations of work initiated and reported in last quarter's status report. Major activities and accomplishments for this quarter include: Three sites in Yellowstone National Park have been identified that may contain suitable organisms for use in a bioreactor; Full-scale culturing of one thermophilic organism from Yellowstone has progressed to the point that there is a sufficient quantity to test this organism in the model-scale bioreactor; The effects of the additive monoethanolamine on the growth of one thermophilic organism from Yellowstone has been tested; Testing of growth surface adhesion and properties is continuing; Construction of a larger model-scale bioreactor to improve and expand testing capabilities is completed and the facility is undergoing proof tests; Model-scale bioreactor tests examining the effects of CO{sub 2} concentration levels and lighting levels on organism growth rates are continuing; Alternative fiber optic based deep-penetration light delivery systems for use in the pilot-scale bioreactor have been designed, constructed and tested; An existing slug flow reactor system has been modified for use in this project, and a proof-of-concept test plan has been developed for the slug flow reactor; Research and testing of water-jet harvesting techniques is continuing, and a harvesting system has been designed for use in the model-scale bioreactor; and The investigation of comparative digital image analysis as a means for determining the ''density'' of algae on a growth surface is continuing Plans for next quarter's work and an update on the project's web page are included in the conclusions.

  1. ENHANCED PRACTICAL PHOTOSYNTHETIC CO2 MITIGATION

    Energy Technology Data Exchange (ETDEWEB)

    Gregory Kremer; David J. Bayless; Morgan Vis; Michael Prudich; Keith Cooksey; Jeff Muhs

    2004-01-30

    This quarterly report documents significant achievements in the Enhanced Practical Photosynthetic CO{sub 2} Mitigation project during the period from 10/2/2003 through 1/1/2004. As indicated in the list of accomplishments below we have seen very encouraging results from the model scale tests in terms of organism growth rates and we have begun the final tests necessary to meet our project goals. Specific results and accomplishments for the fourth quarter of 2003 include: (1) Bioreactor support systems and test facilities--(A) The solar collector is working well and has survived the winter weather. (B) The improved high-flow CRF-2 test system has been used successfully to run several long-term growth tests with periodic harvesting events. The high flow harvesting system performed well. The mass measurement results after a 4-week test show 275% growth over the initial mass loading. This figure would have been higher had there been no leakage and handling losses. Carbon dating of biomass from this test is planned for carbon uptake estimation. The next test will include direct measurement of carbon uptake in addition to organism mass measurements. (C) Qualitative organism growth testing has begun in the pilot scale bioreactor. Some issues with uniformity of organism loading, fluid leakage and evaporation have surfaced and are currently being addressed, and quantitative testing will begin as soon as these problems are resolved. (2) Organisms and Growth Surfaces--(A) Montana State University (Subcontracted to do organism studies) submitted their final (3-year) project report. An abstract of the report in included in this quarterly report.

  2. Construction of pET32a prokaryotic expression vector of C4H gene in Salvia miltiorrhiza%丹参C4H基因pET32a原核表达载体的构建

    Institute of Scientific and Technical Information of China (English)

    张婷婷; 王春丽; 韩蕊莲; 刘岩; 赵旺生; 梁宗锁

    2011-01-01

    【Objective】 The study cloned the core area of cinnamic acid-4-hydroxylase gene(SmC4H) from Salvia miltiorrhiza and constructed prokaryotic expression vector of SmC4H gene.【Method】 We designed and synthesized the primers of full-length about SmC4H gene,then cloned the CDs of SmC4H and added restriction site by PCR.Next we double-digested SmC4H-pGM-T with EcoRⅤ and NotⅠ and ligated with pET32a prokaryotic expression vector,then transformed into E.coli BL21(DE3) and underwent double restriction enzyme digestion.The expression of recombinant protein was analyzed with SDS-PAGE electrophoresis and Western Blot.【Result】 The study cloned 1 200 bp of the gene which was identified as SmC4H gene by sequencing and the SmC4H-pET32a vector was constructed successfully by sequencing and the induced protein was detected by SDS-PAGE and Western Blot analysis,indicating that the expression of recombinant protein which is expressed as inclusion body mostly is better.【Conclusion】 We constructed SmC4H-pET32a prokaryotic expression vector and induced the expression of recombinant protein in SmC4H gene successfully.%【目的】克隆丹参中肉桂酸-4-羟化酶基因(SmC4H)的核心区,并构建SmC4H基因的原核表达载体。【方法】设计合成SmC4H基因全长引物,应用PCR克隆SmC4H基因的编码区并添加酶切位点,应用EcoRⅤ、NotⅠ双酶切SmC4H-pGM-T后与原核表达载体pET32a连接,转化到大肠杆菌BL21(DE3)中进行双酶切鉴定,诱导表达重组蛋白并进行SDS-PAGE电泳以及Western Blot分析。【结果】克隆得到了1 200 bp大小的基因片段,经测序鉴定其为SmC4H基因片段;连接表达载体测序结果表

  3. Investigate Chronic Urticaria Patient' s Condition Correlating to C3, C4 of Peripheral Blood%外周血C3,C4与慢性荨麻疹患者病情的相关性

    Institute of Scientific and Technical Information of China (English)

    何泽生; 安国芝; 赵海春

    2013-01-01

    目的 探讨慢性荨麻疹(chronic urticaria,CU)患者外周血C3,C4水平与病情的相关性.方法 采用免疫比浊法检测19例急性荨麻疹(acute urticaria,AU)、146例CU患者的外周血C3,C4及IgG水平,并以20例健康人为对照.并通过荨麻疹活动评分(UAS)对165例荨麻疹患者的病情进行评分.结果 AU,CU患者外周血的C3,C4及IgG水平差异均无统计学意义(P均>0.05).男女性CU患者外周血的C3,C4及IgG水平差异均无统计学意义(P均>0.05).32例CU患者IgG水平高于正常值(IgG> 17g/L),与C3,C4水平呈负相关(P<0.05).UAS与荨麻疹外用血的C3,C4及IgG水平相关性差,差异无统计学意义(P均>0.05),但与IgG水平升高CU患者的C3,C4水平呈负相关,差异有统计学意义(P<0.05).结论 外周血C3,C4水平可以反应IgG水平升高的CU患者的病情.%Objective To investigate the expression of C3, C4 and IgG in peripheral blood of patients with chronic urti-caria(CU) and its correlationship with CU patients' severity. Methods The expression of C3, C4 and IgG was measured by Immune Turbidimetry in 19 patients with acute urticaria( AU), 146 patients with CU and 20 normal controls. The severity of 165 patients with uricaria was evaluated by Urticaria Activity Score (UAS). Results There were no statistically difference in the expression of C3, C4 and IgG between AU and CU patients(P>0.05) , between male and female CU patients respectively(P>0. 05). The expression of IgG was higher than normal control(IgC > 17g/L) in 32 CU patients, and showed negative correlation with the expression of C3 and C4( P < 0. 05 ). UAS was poor relation to the expression of C3 , C4 and IgG in urticaria patient's peripheral blood, but was negative correlation to the levels of C3, C4 in CU patients whose expression of IgG was higher than normal control( P <0.05). Conclusion The expression of C3, C4 could respond to the severity of CU patients whose expression of IgG is higher than normal control.

  4. Immunological role of C4 CC chemokine-1 from snakehead murrel Channa striatus.

    Science.gov (United States)

    Bhatt, Prasanth; Kumaresan, Venkatesh; Palanisamy, Rajesh; Chaurasia, Mukesh Kumar; Gnanam, Annie J; Pasupuleti, Mukesh; Arockiaraj, Jesu

    2014-02-01

    In this study, we have reported a cDNA sequence of C4 CC chemokine identified from snakehead murrel (also known as striped murrel) Channa striatus (named as CsCC-Chem-1) normalized cDNA library constructed by Genome Sequencing FLX™ Technology (GS-FLX™). CsCC-Chem-1 is 641 base pairs (bp) long that contain 438 bp open reading frame (ORF). The ORF encodes a polypeptide of 146 amino acids with a molecular mass of 15 kDa. The polypeptide contains a small cytokine domain at 30-88. The domain carries the CC motif at Cys(33)-Cys(34). In addition, CsCC-Chem-1 consists of another two cysteine residues at C(59) and C(73), which, together with C(33) and C(34), make CsCC-Chem-1 as a C4-CC chemokine. CsCC-Chem-1 also contains a 'TCCT' motif at 32-35 as CC signature motif; this new motif may represent new characteristic features, which may lead to some unknown function that needs to be further focused on. Phylogenitically, CsCC-Chem-1 clustered together with CC-Chem-1 from rock bream Oplegnathus fasciatus and European sea bass Dicentrarchus labrax. Significantly (P<0.05) highest gene expression was noticed in spleen and is up-regulated upon fungus (Aphanomyces invadans), bacteria (Aeromonas hydrophila) and virus (poly I:C) infection at various time points. The gene expression results indicate the influence of CsCC-Chem-1 in the immune system of murrel. Overall, the gene expression study showed that the CsCC-Chem-1 is a capable gene to increase the cellular response against various microbial infections. Further, we cloned the coding sequence of CsCC-Chem-1 in pMAL vector and purified the recombinant protein to study the functional properties. The cell proliferation activity of recombinant CsCC-Chem-1 protein showed a significant metabolic activity in a concentration dependent manner. Moreover, the chemotaxis assay showed the capability of recombinant CsCC-Chem-1 protein which can induce the migration of spleen leukocytes in C. striatus. However, this remains to be verified

  5. Comparison of carbon balance in Mediterranean pilot constructed wetlands vegetated with different C4 plant species.

    Science.gov (United States)

    Barbera, Antonio C; Borin, Maurizio; Cirelli, Giuseppe L; Toscano, Attilio; Maucieri, Carmelo

    2015-02-01

    This study investigates carbon dioxide (CO2) and methane (CH4) emissions and carbon (C) budgets in a horizontal subsurface flow pilot-plant constructed wetland (CW) with beds vegetated with Cyperus papyrus L., Chrysopogon zizanioides (L.) Roberty, and Mischantus × giganteus Greef et Deu in the Mediterranean basin (Sicily) during the 1st year of plant growing season. At the end of the vegetative season, M. giganteus showed the higher biomass accumulation (7.4 kg m(-2)) followed by C. zizanioides (5.3 kg m(-2)) and C. papyrus (1.8 kg m(-2)). Significantly higher emissions of CO2 were detected in the summer, while CH4 emissions were maximum during spring. Cumulative CO2 emissions by C. papyrus and C. zizanioides during the monitoring period showed similar trends with final values of about 775 and 1,074 g m(-2), respectively, whereas M. giganteus emitted 3,395 g m(-2). Cumulative CH4 bed emission showed different trends for the three C4 plant species in which total gas release during the study period was for C. papyrus 12.0 g m(-2) and ten times higher for M. giganteus, while C. zizanioides bed showed the greatest CH4 cumulative emission with 240.3 g m(-2). The wastewater organic carbon abatement determined different C flux in the atmosphere. Gas fluxes were influenced both by plant species and monitored months with an average C-emitted-to-C-removed ratio for C. zizanioides, C. papyrus, and M. giganteus of 0.3, 0.5, and 0.9, respectively. The growing season C balances were positive for all vegetated beds with the highest C sequestered in the bed with M. giganteus (4.26 kg m(-2)) followed by C. zizanioides (3.78 kg m(-2)) and C. papyrus (1.89 kg m(-2)). To our knowledge, this is the first paper that presents preliminary results on CO2 and CH4 emissions from CWs vegetated with C4 plant species in Mediterranean basin during vegetative growth. PMID:24743957

  6. Molecular and vibrational structure of the extracellular bacterial signal compound N-butyryl-homoserine lactone (C4-HSL)

    DEFF Research Database (Denmark)

    Bak, Jimmy; Spanget-Larsen, Jens

    2009-01-01

    The molecular and vibrational structure of the title compound (C4-HSL) was studied by experimental and theoretical methods. The infrared (IR) absorption spectrum was measured in the solid state and in CCl4 suspension. The observed absorption bands were compared with transitions obtained with B3LYP...... with the observed solid state IR spectrum. Due to the low solubility of C4-HSL in common solvents for IR spectroscopy, such as CS2 and CCl4, a liquid solution spectrum of pure, monomeric C4-HSL was not obtained. However, absorbance peaks observed in oversaturated CCl4 solution could be assigned to distinct...... contributions from suspended micro-crystalline aggregates and dissolved monomeric species. The key vibrational bands of the monomeric form of C4-HSL are reported here for the first time: 3425cm−1 (ν(N-H)), 1784cm−1 (ν(C&dbnd;O), lactone), 1688cm−1 (amide I), and 1494cm−1 (amide II) (CCl4)....

  7. Adulteration Identification of Commercial Honey with the C-4 Sugar Content of Negative Values by an Elemental Analyzer and Liquid Chromatography Coupled to Isotope Ratio Mass Spectroscopy.

    Science.gov (United States)

    Dong, Hao; Luo, Donghui; Xian, Yanping; Luo, Haiying; Guo, Xindong; Li, Chao; Zhao, Mouming

    2016-04-27

    According to the AOAC 998.12 method, honey is considered to contain significant C-4 sugars with a C-4 sugar content of >7%, which are naturally identified as the adulteration. However, the authenticity of honey with a C-4 sugar content of authenticity of honey with a C-4 sugar content of authenticity identification of honey with a C-4 sugar content of <0%. PMID:27064147

  8. A Modified Thermal Time Model Quantifying Germination Response to Temperature for C3 and C4 Species in Temperate Grassland

    Directory of Open Access Journals (Sweden)

    Hongxiang Zhang

    2015-07-01

    Full Text Available Thermal-based germination models are widely used to predict germination rate and germination timing of plants. However, comparison of model parameters between large numbers of species is rare. In this study, seeds of 27 species including 12 C4 and 15 C3 species were germinated at a range of constant temperatures from 5 °C to 40 °C. We used a modified thermal time model to calculate germination parameters at suboptimal temperatures. Generally, the optimal germination temperature was higher for C4 species than for C3 species. The thermal time constant for the 50% germination percentile was significantly higher for C3 than C4 species. The thermal time constant of perennials was significantly higher than that of annuals. However, differences in base temperatures were not significant between C3 and C4, or annuals and perennial species. The relationship between germination rate and seed mass depended on plant functional type and temperature, while the base temperature and thermal time constant of C3 and C4 species exhibited no significant relationship with seed mass. The results illustrate differences in germination characteristics between C3 and C4 species. Seed mass does not affect germination parameters, plant life cycle matters, however.

  9. Carbon isotopic evidence from paleosols for mixed C 3/C 4 vegetation in the Bogota Basin, Colombia

    Science.gov (United States)

    Mora, Germán; Pratt, Lisa M.

    2002-04-01

    Pollen reconstructions in the Bogota basin (Colombia) indicate the expansion of tropical high-altitude grassland (paramo) at the expense of Andean forests during glacial intervals. The carbon isotopic composition (δ 13C) of soil organic matter (SOM) can be a useful indicator of changes in vegetation affecting grasslands because it distinguishes between two groups of grasses (C 3 and C 4) adapted to different ecological environments. Values of SOM δ 13C were determined in four weathering profiles containing both modern (Holocene) soils and paleosols formed during the Last Glacial Stage. These profiles are located along an altitudinal transect in the Bogota basin, extending from 2550 to 3100 m. Values of SOM δ 13C in the topsoil horizons reflect those of the native C 3 vegetation that currently dominates the ecosystems in the Colombian Andes. Although C 4 grasses are currently negligible in the basin, elevated SOM δ 13C values indicative of C 4 plants were found in two Holocene soils. Environmental changes or ancient agricultural activities could explain the increased abundance of these plants in the basin during the late Holocene. Isotopic values in the studied paleosols revealed the presence of a mixed C 3/C 4 vegetation in the basin during the Last Glacial Stage, thus indicating the expansion of C 4 grasses. We hypothesized that lowered pCO 2 and possibly reduced rainfall resulted in the colonization of the tropical Andes by lowland C 4 grasses despite of prevailing cooler temperatures.

  10. Analysis of carbon isotope in phytoliths from C3 and C4 plants and modern soils

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    The analysis of carbon isotope in phytoliths from modern plants and surface soils in China shows that the values of carbon isotope are consistent with those from C3 and C4 plants,and the processes of photosynthesis of the original plants can be clearly identified by carbon isotope in phytoliths.The value of carbon isotope varied from -23.8‰ to -28‰,with the maximum distributed in the latitude zone from 34° N to 40° N in North China and East China areas,and the minimum in the Northeast China and South China regions.The values of carbon of phytoliths tend to increase from low to high and then reduce to low value again as the latitude increases.In the same latitude zone,the carbon isotope in phytoliths from grassland soil under the trees is obviously lower than that from grassland soil without any trees with the difference of 1‰-2‰.

  11. Microscopic calculations of C2 and C4 form factors in sd-shell nuclei

    CERN Document Server

    Radhi, R A

    2003-01-01

    Inelastic electron scattering to 2 sup + and 4 sup + states for the even-even N=Z sd-shell nuclei ( sup 2 sup 0 Ne, sup 2 sup 4 Mg, sup 2 sup 8 Si and sup 3 sup 2 S) are discussed taking into account higher energy configurations outside the sd-shell. Higher energy configurations, which are called core polarization effects, are included through a microscopic theory that includes excitations from the core 1s and 1p orbits and also from 2s-1d shell to the higher allowed orbits with 2 Planck constant omega excitations. The predictions of C2 and C4 Coulomb form factors are compared with the available experimental data. The calculations based on the Wildenthal interaction for the sd-shell model space and on the modified surface delta interaction for the core-polarization effects. The effect of higher excited configurations is found essential in both the transition strength and momentum transfer dependence of form factors, and gives a remarkably good agreement with the measured data.

  12. The crystal structure of (Fe4Cr4Ni)9C4

    Institute of Scientific and Technical Information of China (English)

    SHI; Nicheng; MA; Zhesheng; XIONG; Ming; DAI; Mingquan; BA

    2005-01-01

    (Fe4Cr4Ni)9C4 is a metal carbide mineral formed by combination of Fe, Cr and Ni with C. It occurs in a chromite deposit in the Luobusha ophiolite, Tibet. Based on the determination of its crystal structure, the empirical formula is (Fe4.12Cr3.84Ni0.96)8.92C3.70 and the simplified formula is (Fe4Cr4Ni)4C9. The mineral is hexagonal with a = 1.38392(2) nm, c = 0.44690(9) nm,space group P63 m c, Z=6 and the calculated specific gravity Dx = 7.089 g/cm3. Fe, Cr and Ni occupy different crystallographic sites and their coordination numbers are approximately 12,forming an alternate stacking sequence of flat and puckered layers along the c axis. Some metallic atoms have a defect structure. The interatomic distances of Fe, Cr and Ni are 0.2525-0.2666 nm, and the distances between Fe, Cr, Ni and C are 0.1893-0.2169 nm. The coordination number of carbon is 6. It occurs in interstices of the metallic atoms Fe, Cr and Ni to form trigonal-prismatically coordinated polyhedra. These coordination polyhedra are linked with each other via shared corners or shared edges into a new type of metal carbide structure.

  13. Development of architecture for digital I and C system using C4ISR framework

    International Nuclear Information System (INIS)

    The architect framework for the digital I and C system is presented in this work. With rapid changes in digital I and C technology, there is a strong need to provide uniform methods to describe the system functions and their performance in context with the physical configuration and logical behavior. C4ISR framework would provide the process and method for the digital system in that it allows the three different views of operational, systems and services, and technical standards. Therefore, stakeholders can share information that is related to the system interfaces, the actions or activities that those components perform, and rules or constraints for those activities from the initial state of system development. As a result, the lifecycle cost and development time for the digital I and C system can also be optimized. These benefits can be obtained by introducing views and products to reveal the logical, behavioral, and performance characteristics of the architecture. To prove this approach, the plant protection system (PPS) is chosen and the architect framework is developed. (author)

  14. Modeling and verifying SoS performance requirements of C4ISR systems

    Institute of Scientific and Technical Information of China (English)

    Yudong Qi; Zhixue Wang; Qingchao Dong; Hongyue He

    2015-01-01

    System-of-systems (SoS) engineering involves a com-plex process of refining high-level SoS requirements into more detailed systems requirements and assessing the extent to which the performances of to-be systems may possibly satisfy SoS capa-bility objectives. The key issue is how to model such requirements to automate the process of analysis and assessment. This paper suggests a meta-model that defines both functional and non-functional features of SoS requirements for command and control, communication, computer, intel igence, surveil ance reconnais-sance (C4ISR) systems. A domain-specific modeling language is defined by extending unified modeling language (UML) con-structed of class and association with fuzzy theory in order to model the fuzzy concepts of performance requirements. An effi-ciency evaluation function is introduced, based on B´ezier curves, to predict the effectiveness of systems. An algorithm is presented to transform domain models in fuzzy UML into a requirements ontology in description logic (DL) so that requirements verification can be automated with a popular DL reasoner such as Pel et.

  15. Contribution of root respiration to soil respiration in a C3/C4 mixed grassland

    Indian Academy of Sciences (India)

    Wei Wang; Kenji Ohse; Jianjun Liu; Wenhong Mo; Takehisa Oikawa

    2005-09-01

    The spatial and temporal variations of soil respiration were studied from May 2004 to June 2005 in a C3/C4 mixed grassland of Japan. The linear regression relationship between soil respiration and root biomass was used to determine the contribution of root respiration to soil respiration. The highest soil respiration rate of 11.54 mol m–2 s–1 was found in August 2004 and the lowest soil respiration rate of 4.99 mol m–2 s–1 was found in April 2005. Within-site variation was smaller than seasonal change in soil respiration. Root biomass varied from 0.71 kg m–2 in August 2004 to 1.02 in May 2005. Within-site variation in root biomass was larger than seasonal variation. Root respiration rate was highest in August 2004 (5.7 mol m–2 s–1) and lowest in October 2004 (1.7 mol m–2 s–1). Microbial respiration rate was highest in August 2004 (5.8 mol m–2 s–1) and lowest in April 2005 (2.59 mol m–2 s–1). We estimated that the contribution of root respiration to soil respiration ranged from 31% in October to 51% in August of 2004, and from 45% to 49% from April to June 2005.

  16. Human Talent Prediction in HRM using C4.5 Classification Algorithm

    Directory of Open Access Journals (Sweden)

    Hamidah Jantan,

    2010-11-01

    Full Text Available In HRM, among the challenges for HR professionals is to manage an organization’s talents, especially to ensure the right person for the right job at the right time. Human talent prediction is an alternative to handle this issue. Due to that reason, classification and prediction in data mining which is commonly used in many areas can also be implemented to human talent. There are many classification techniques in data mining techniques such as Decision Tree, Neural Network, Rough Set Theory, Bayesian theory and Fuzzy logic. Decision tree is among the popular classification techniques, which can produce the interpretable rules or logic statement. Thegenerated rules from the selected technique can be used for future prediction. In this article, we present the study on how the potential human talent can be predicted using a decision tree classifier. By using this technique, the pattern of talent performance can be identified through the classification process. In that case, the hidden and valuable knowledge discovered in the related databases will be summarized in the decision tree structure. In this study, we use decision tree C4.5 classification algorithm to generate the classification rules for human talent performance records. Finally, the generated rules are evaluated using the unseen data in order to estimate the accuracy of the prediction result.

  17. Perfect Octagon Quadrangle Systems with an upper C4-system and a large spectrum

    Directory of Open Access Journals (Sweden)

    Luigia Berardi

    2011-02-01

    Full Text Available An octagon quadrangle is the graph consisting of an 8-cycle (x1, x2,..., x8 with two additional chords: the edges {x1, x4} and {x5, x8}. An octagon quadrangle system of order ν and index λ [OQS] is a pair (X,H, where X is a finite set of ν vertices and H is a collection of edge disjoint octagon quadrangles (called blocks which partition the edge set of λKν defined on X. An octagon quadrangle system Σ=(X,H of order ν and index λ is said to be upper C4-perfect if the collection of all of the upper 4-cycles contained in the octagon quadrangles form a μ-fold 4-cycle system of order ν; it is said to be upper strongly perfect, if the collection of all of the upper 4-cycles contained in the octagon quadrangles form a μ-fold 4-cycle system of order ν and also the collection of all of the outside 8-cycles contained in the octagon quadrangles form a ρ-fold 8-cycle system of order ν. In this paper, the authors determine the spectrum for these systems, in the case that it is the largest possible.

  18. Effects of selenium and vitamin E deficiencies on level of leukotriene C4

    Institute of Scientific and Technical Information of China (English)

    刘为民; 岳丽杰; 等

    1996-01-01

    A reduction in the glutatihion peroxidase(GSH-Px) activity of the blood and myocardium accompanied with an increase in the leukotriene C4(LTC4),free radicals and lipid peroxides(LPO) concentrations of the plasma and myocardium are found in Wistar rats fed with the low selenium(Se) and vitamin E(VE) grains from a Keshan disease(KD) endemic area for 11 weeks.The concentrations of LTC4,free radical and LPO were decreased in these rats and the GSH-Px activity is strengthened except the group supplemented with VE alone.Theses results suggest that the dietary deficiencies of Se and VE might take part in the occurrence and devepopment process of myocardial damage in KD and other ischemic and anoxic cardiomyopathy by affecting the activity of lipoxygenase in arachidonic acid metabolism and by cardiomyopathy by affecting the activity of lipoxygenased in arachidonic acid metabolism and by accelerating the synthesis of LTC4 owing to excessive free radicals and LPO.

  19. The effect of timing of growing season drought on flowering of a dominant C4 grass.

    Science.gov (United States)

    Dietrich, John D; Smith, Melinda D

    2016-06-01

    Timing of precipitation is equally important as amount for determining ecosystem function, especially aboveground net primary productivity (ANPP), in a number of ecosystems. In tallgrass prairie of the Central Plains of North America, grass flowering stalks of dominant C4 grasses, such as Andropogon gerardii, can account for more than 70 % of ANPP, or almost none of it, as the number of flowering stalks produced is highly variable. Although growing season precipitation amount is important for driving variation in flowering stalk production, it remains unknown whether there are critical periods within the growing season in which sufficient rainfall must occur to allow for flowering. The effect of timing of rainfall deficit (drought) on flowering of A. gerardii, was tested by excluding rainfall during three periods within the growing season (starting in mid-April, mid-May and mid-June). Mid-summer drought (starting in mid-June) strongly reduced the flowering rate (e.g., density and biomass) of A. gerardii (e.g., as high as 94 % compared to the control), suggesting flowering is highly sensitive to precipitation at this time. This effect appeared to be related to plant water status at the time of flowering stalk initiation, rather than an indirect consequence of reduced C assimilation. Our results suggest that increased frequency of growing season drought forecast with climate change could reduce sexual reproduction in this dominant grass species, particularly if it coincides with timing of flowering stalk initiation, with important implications for ecosystem functioning. PMID:26886131

  20. Air oxidation and seawater corrosion of Hastelloy S and Hastelloy C-4

    International Nuclear Information System (INIS)

    A program is currently under way at the Pacific Northwest Laboratory (PNL) to develop the data and technology needed to permit the licensing of 90SrF2 as a radioisotope heat source fuel for terrestrial applications. The WESF 90SrF2 storage capsule consists of a Hastelloy C-276 inner capsule (2 in. I.D. x 19 in. long) and a 316L stainless steel outer capsule (2-3/8 in. I.D. x 20 in. long). Preliminary experimental tests and theoretical calculations show that the WESF storage capsule is incapable of meeting current licensing requirements for heat sources that are to be used for terrestrial applications. Therefore, the DOE decision was to develop a new heat source design that would retain the existing WESF Hastelloy C-276 inner capsule and replace the current WESF outer capsule with a new outer capsule capable of meeting current licensing requirements. Based on a number of factors, Hastelloy S was selected as the outer capsule material. Hastelloy C-4 was selected as a backup material in case the Hastelloy S had to be rejected for any reason. This report summarizes the results of studies carried out to determine the effects of both air oxidation at heat source operating temperatures and seawater corrosion on the tensile properties of the outer capsule materials

  1. Two-dimensional electronic spectroscopy and photosynthesis: Fundamentals and applications to photosynthetic light-harvesting

    International Nuclear Information System (INIS)

    Graphical abstract: 2D electronic spectroscopy, when combined with theoretical approaches, can investigate structure-function relationships in photosynthetic complexes by probing electronic energy transfer and excited state orientations. Display Omitted Highlights: → We review theoretical principles and experimental implementation of 2D spectroscopy. → 2DES monitors energy transfer, observes coherence, determines excited state geometry, and compares to homology models. → 2DES reveals structure-function relationships in the Photosystem II supercomplex. - Abstract: In natural light harvesting systems, pigment-protein complexes are able to harvest sunlight with near unity quantum efficiency. These complexes exhibit emergent properties that cannot be simply extrapolated from knowledge of their component parts. In this perspective, we focus on how two-dimensional electronic spectroscopy (2DES) can provide an incisive tool to probe the electronic, energetic, and spatial landscapes that must be understood to describe photosynthetic light-harvesting. We review the theoretical and experimental principles of 2DES, and demonstrate its application to the study of the Photosystem II supercomplex of green plants. We illustrate several capabilities of 2DES, including monitoring energy transfer pathways, observing excitonic coherence, determining excitonic geometry, and informing on the atomic structure.

  2. Single-molecule spectroscopy reveals photosynthetic LH2 complexes switch between emissive states.

    Science.gov (United States)

    Schlau-Cohen, Gabriela S; Wang, Quan; Southall, June; Cogdell, Richard J; Moerner, W E

    2013-07-01

    Photosynthetic organisms flourish under low light intensities by converting photoenergy to chemical energy with near unity quantum efficiency and under high light intensities by safely dissipating excess photoenergy and deleterious photoproducts. The molecular mechanisms balancing these two functions remain incompletely described. One critical barrier to characterizing the mechanisms responsible for these processes is that they occur within proteins whose excited-state properties vary drastically among individual proteins and even within a single protein over time. In ensemble measurements, these excited-state properties appear only as the average value. To overcome this averaging, we investigate the purple bacterial antenna protein light harvesting complex 2 (LH2) from Rhodopseudomonas acidophila at the single-protein level. We use a room-temperature, single-molecule technique, the anti-Brownian electrokinetic trap, to study LH2 in a solution-phase (nonperturbative) environment. By performing simultaneous measurements of fluorescence intensity, lifetime, and spectra of single LH2 complexes, we identify three distinct states and observe transitions occurring among them on a timescale of seconds. Our results reveal that LH2 complexes undergo photoactivated switching to a quenched state, likely by a conformational change, and thermally revert to the ground state. This is a previously unobserved, reversible quenching pathway, and is one mechanism through which photosynthetic organisms can adapt to changes in light intensities.

  3. Two-dimensional electronic spectroscopy and photosynthesis: Fundamentals and applications to photosynthetic light-harvesting

    Energy Technology Data Exchange (ETDEWEB)

    Schlau-Cohen, Gabriela S.; Ishizaki, Akihito [Department of Chemistry, University of California, Berkeley, CA 94720 (United States); Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Fleming, Graham R., E-mail: grfleming@lbl.gov [Department of Chemistry, University of California, Berkeley, CA 94720 (United States); Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States)

    2011-07-28

    Graphical abstract: 2D electronic spectroscopy, when combined with theoretical approaches, can investigate structure-function relationships in photosynthetic complexes by probing electronic energy transfer and excited state orientations. Display Omitted Highlights: {yields} We review theoretical principles and experimental implementation of 2D spectroscopy. {yields} 2DES monitors energy transfer, observes coherence, determines excited state geometry, and compares to homology models. {yields} 2DES reveals structure-function relationships in the Photosystem II supercomplex. - Abstract: In natural light harvesting systems, pigment-protein complexes are able to harvest sunlight with near unity quantum efficiency. These complexes exhibit emergent properties that cannot be simply extrapolated from knowledge of their component parts. In this perspective, we focus on how two-dimensional electronic spectroscopy (2DES) can provide an incisive tool to probe the electronic, energetic, and spatial landscapes that must be understood to describe photosynthetic light-harvesting. We review the theoretical and experimental principles of 2DES, and demonstrate its application to the study of the Photosystem II supercomplex of green plants. We illustrate several capabilities of 2DES, including monitoring energy transfer pathways, observing excitonic coherence, determining excitonic geometry, and informing on the atomic structure.

  4. Diversity in biosynthetic pathways of galactolipids in the light of endosymbiotic origin of chloroplasts

    Directory of Open Access Journals (Sweden)

    Naoki eSato

    2016-02-01

    Full Text Available Cyanobacteria and chloroplasts perform oxygenic photosynthesis, and share a common origin. Galactolipids are present in the photosynthetic membranes of both cyanobacteria and chloroplasts, but the biosynthetic pathways of the galactolipids are significantly different in the two systems. In this minireview, we explain the history of the discovery of the cyanobacterial pathway, and present a probable scenario of the evolution of the two pathways.

  5. Activation of 3-phosphoinositide-dependent kinase 1 (PDK1) and serum- and glucocorticoid-induced protein kinase 1 (SGK1) by short-chain sphingolipid C4-ceramide rescues the trafficking defect of ΔF508-cystic fibrosis transmembrane conductance regulator (ΔF508-CFTR).

    Science.gov (United States)

    Caohuy, Hung; Yang, Qingfeng; Eudy, Yvonne; Ha, Thien-An; Xu, Andrew E; Glover, Matthew; Frizzell, Raymond A; Jozwik, Catherine; Pollard, Harvey B

    2014-12-26

    Cystic fibrosis (CF) is due to a folding defect in the CF transmembrane conductance regulator (CFTR) protein. The most common mutation, ΔF508, prevents CFTR from trafficking to the apical plasma membrane. Here we show that activation of the PDK1/SGK1 signaling pathway with C4-ceramide (C4-CER), a non-toxic small molecule, functionally corrects the trafficking defect in both cultured CF cells and primary epithelial cell explants from CF patients. The mechanism of C4-CER action involves a series of mutual autophosphorylation and phosphorylation events between PDK1 and SGK1. Detailed mechanistic studies indicate that C4-CER initially induces autophosphorylation of SGK1 at Ser(422). SGK1[Ser(P)(422)] and C4-CER coincidently bind PDK1 and permit PDK1 to autophosphorylate at Ser(241). Then PDK1[Ser(P)(241)] phosphorylates SGK1[Ser(P)(422)] at Thr(256) to generate fully activated SGK1[Ser(422), Thr(P)(256)]. SGK1[Ser(P)(422),Thr(P)(256)] phosphorylates and inactivates the E3 ubiquitin ligase Nedd4-2. ΔF508-CFTR is thus free to traffic to the plasma membrane. Importantly, C4-CER-mediated activation of both PDK1 and SGK1 is independent of the PI3K/Akt/mammalian target of rapamycin signaling pathway. Physiologically, C4-CER significantly increases maturation and stability of ΔF508-CFTR (t½ ∼10 h), enhances cAMP-activated chloride secretion, and suppresses hypersecretion of interleukin-8 (IL-8). We suggest that candidate drugs for CF directed against the PDK1/SGK1 signaling pathway, such as C4-CER, provide a novel therapeutic strategy for a life-limiting disorder that affects one child, on average, each day.

  6. Principles of light harvesting from single photosynthetic complexes.

    Science.gov (United States)

    Schlau-Cohen, G S

    2015-06-01

    Photosynthetic systems harness sunlight to power most life on Earth. In the initial steps of photosynthetic light harvesting, absorbed energy is converted to chemical energy with near-unity quantum efficiency. This is achieved by an efficient, directional and regulated flow of energy through a network of proteins. Here, we discuss the following three key principles of this flow and of photosynthetic light harvesting: thermal fluctuations of the protein structure; intrinsic conformational switches with defined functional consequences; and environmentally triggered conformational switches. Through these principles, photosynthetic systems balance two types of operational costs: metabolic costs, or the cost of maintaining and running the molecular machinery, and opportunity costs, or the cost of losing any operational time. Understanding how the molecular machinery and dynamics are designed to balance these costs may provide a blueprint for improved artificial light-harvesting devices. With a multi-disciplinary approach combining knowledge of biology, this blueprint could lead to low-cost and more effective solar energy conversion. Photosynthetic systems achieve widespread light harvesting across the Earth's surface; in the face of our growing energy needs, this is functionality we need to replicate, and perhaps emulate. PMID:26052423

  7. Expression of complement components C3 and C4 in Takifugu obscurus infected by Aeromonas hydrophila%感染后暗纹东方纯补体组分C3、C4表达分析

    Institute of Scientific and Technical Information of China (English)

    陈勇; 郭丽; 陈舒泛

    2008-01-01

    通过用不同浓度(0、1×106、2×106、4×106 CFU/ml)的嗜水气单胞菌感染暗纹东方纯,利用RT-PCR技术检测感染后不同时间肝脏以及不同组织补体组分C3和C4的表达量,以了解和比较补体组分C3和C4在鱼体正常和患病状态以及感染后不同时间、不同组织内的表达差异.结果表明,补体组分c3的表达量在用2×106CFU/ml嗜水气单胞菌感染9 h时达到最大,补体组分C4表达量在用4×106 CFU/ml嗜水气单胞菌感染10 h时最大;在不同组织中补体组分C3和C4均是在肝脏中的表达量最大.由此可见,补体组分C3和C4在介导病原体清除及创伤修复过程中起着重要作用.

  8. Evaluation of [methyl- 14C]4'-thio-thymidine for DNA synthesis imaging in vivo

    International Nuclear Information System (INIS)

    Objective: In order to obtain a thymidine analog that might prove simpler to use for imaging DNA synthesis and follow the same biochemistry of thymidine in vivo, we evaluated [methyl- 11C]4'-thio-thymidine ([methyl- 11C]S-dThd) by using the [14C]-labeled counterpart ([methyl- 14C]S-dThd). Methods: [methyl-14C]S-dThd was synthesized by rapid methylation of 5-trimethyl-stannyl-4' -thio-2' -deoxyuridine via a palladium mediated Stille-coupling reaction with [14C]methyl iodide. Degradation of [methyl- 14C]S-dThd when incubated in human blood was analyzed by HPLC. The in vivo potential of [methyl- 14C]S-dThd was evaluated by distribution study of EMT-6 mammary carcinoma-bearing mice. Gemcitabine, a potent inhibitor of DNA synthesis, was used to modulate cell proliferation. Tissue extraction was also performed to investigate the incorporation of [methyl-14C]S-dThd into DNA. Results: [methyl- 14C]S-dThd was obtained in 31-41% radiochemical yield (calculated from [14C]methyl iodide) at 130, 5 min reaction in N,N-dimethylforamide. After semi-preparative HPLC purification, radiochemical purity of [methyl- 14C]S-dThd was >99% and the specific activity was 2.04 GBq/mmol (according to the specific activity of [14C]methyl iodide). Incubation with human blood demonstrated rapid degradation of [2- 14C]thymidine. In contrast, [methyl- 14C]S-dThd was stable with less than 3% degradation at 60 min. In vivo distribution study showed progressive accumulation of radioactivity in proliferating tissues (spleen, thymus, duodenum and tumor). On the other hand, the washout of radioactivity by the non-proliferating tissues (lung, liver, kidney and muscle) appeared nearly exponential. The tumor uptake of [methyl- 14C]S-dThd was high (8.8%ID/g at 60 min) and selective (Tumor to blood ratio: 12.2 at 60 min). Gemicitabine pretreatment significantly reduced the tumor uptake of [methyl- 14C]S-dThd. Relative blood flow as measured by the uptake 4-[N-Methyl- 14C]iodoantipyrine was similar in the

  9. Effects of substitution on counterflow ignition and extinction of C3 and C4 alcohols

    KAUST Repository

    Alfazazi, Adamu

    2016-06-17

    Dwindling reserves and inherent uncertainty in the price of conventional fuels necessitates a search for alternative fuels. Alcohols represent a potential source of energy for the future. The structural features of an alcohol fuel have a direct impact on combustion properties. In particular, substitution in alcohols can alter the global combustion reactivity. In this study, experiments and numerical simulations were conducted to investigate the critical conditions of extinction and autoignition of n-propanol, 1-butanol, iso-propanol and iso-butanol in non-premixed diffusion flames. Experiments were carried out in the counterflow configuration, while simulations were conducted using a skeletal chemical kinetic model for the C3 and C4 alcohols. The fuel stream consists of the pre-vaporized fuel diluted with nitrogen, while the oxidizer stream is air. The experimental results show that autoignition temperatures of the tested alcohols increase in the following order: iso-propanol > iso-butanol > 1-butanol ≈ n-propanol. The simulated results for the branched alcohols agree with the experiments, while the autoignition temperature of 1-butanol is slightly higher than that of n-propanol. For extinction, the experiments show that the extinction limits of the tested fuels increase in the following order: n-propanol ≈ 1-butanol > iso-butanol > iso-propanol. The model suggests that the extinction limits of 1-butanol is slightly higher than n-propanol with extinction strain rate of iso-butanol and iso-propanol maintaining the experimentally observed trend. The transport weighted enthalpy (TWE) and radical index (Ri) concepts were utilized to rationalize the observed reactivity trends for these fuels.

  10. Non-specific phospholipase C4 mediates response to aluminum toxicity in Arabidopsis thaliana

    Directory of Open Access Journals (Sweden)

    Přemysl ePejchar

    2015-02-01

    Full Text Available Aluminum ions (Al have been recognized as a major toxic factor for crop production in acidic soils. The first indication of the Al toxicity in plants is the cessation of root growth, but the mechanism of root growth inhibition is largely unknown. Here we examined the impact of Al on the expression, activity and function of the non-specific phospholipase C4 (NPC4, a plasma membrane-bound isoform of NPC, a member of the plant phospholipase family, in Arabidopsis thaliana.We observed a lower expression of NPC4 using GUS assay and a decreased formation of labeled diacylglycerol, product of NPC activity, using fluorescently labeled phosphatidylcholine as a phospholipase substrate in Arabidopsis WT seedlings treated with AlCl3 for 2 h. The effect on in situ NPC activity persisted for longer Al treatment periods (8, 14 h. Interestingly, in seedlings overexpressing NPC4, the Al-mediated NPC-inhibiting effect was alleviated at 14 h. However, in vitro activity and localization of NPC4 were not affected by Al, thus excluding direct inhibition by Al ions or possible translocation of NPC4 as the mechanisms involved in NPC-inhibiting effect. Furthermore, the growth of tobacco pollen tubes rapidly arrested by Al was partially rescued by the overexpression of AtNPC4 while Arabidopsis npc4 knockout lines were found to be more sensitive to Al stress during long-term exposure of Al at low phosphate conditions.Our observations suggest that NPC4 plays a role in both early and long-term responses to Al stress.

  11. The Late Miocene Rise of C4 Vegetation in Eastern Africa Documented by Terrestrial Plant Waxes in Marine Cores

    Science.gov (United States)

    Uno, K. T.; Polissar, P. J.; Jackson, K.; deMenocal, P. B.

    2015-12-01

    C4 plants are predominantly grasses and they account for ~20% of global net primary productivity, serve as important sources of food, and are the dominant plant type in non-forested tropical ecosystems. Yet the reasons behind their rise to such a globally significant component of the terrestrial biosphere within the last 10 million years are not well understood. In eastern Africa, the expansion of C4 grasslands led to long-term changes in faunal distributions and resulted in major dietary shifts in mammalian lineages. Potential mechanisms leading to the rise of C4 plants include a decrease in atmospheric CO2, ecosystem perturbations by fire or large herbivores, and increased aridity or seasonality of precipitation. Improvement of the temporal and spatial coverage of vegetation records in the Late Neogene of East Africa may help elucidate the mechanisms responsible for regional and global C4 grassland expansion. It will also improve our ability to assess the relationship between vegetation change and mammalian evolution. To evaluate the evolution of C4 grasslands in East Africa, we measured carbon isotope ratios of n-alkanes from four DSDP cores stretching from the Red Sea (19.1° N) to the Somali Basin (2.4° S) that range in age from ~24 Ma to 0.5 Ma. Carbon isotope data from Somali Basin sites 235 and 241 indicate the appearance of C4 vegetation by ca. 10 Ma, followed by a relatively steady increase through the late Pleistocene. Odd numbered n-alkane homologues (C29 ­to C35) exhibit up to a 10‰ increase in δ13C. We also established end member molecular distributions of n-alkanes and tracked changes in their proportional contributions through time. Changes in molecular distribution are broadly synchronous with increases in carbon isotope ratios, suggesting that n-alkane distributions reflect changes in C3 and C4 vegetation types.

  12. Selection of an Appropriate Protein Extraction Method to Study the Phosphoproteome of Maize Photosynthetic Tissue

    Science.gov (United States)

    Luís, Inês M.; Alexandre, Bruno M.; Oliveira, M. Margarida

    2016-01-01

    Often plant tissues are recalcitrant and, due to that, methods relying on protein precipitation, such as TCA/acetone precipitation and phenol extraction, are usually the methods of choice for protein extraction in plant proteomic studies. However, the addition of precipitation steps to protein extraction methods may negatively impact protein recovery, due to problems associated with protein re-solubilization. Moreover, we show that when working with non-recalcitrant plant tissues, such as young maize leaves, protein extraction methods with precipitation steps compromise the maintenance of some labile post-translational modifications (PTMs), such as phosphorylation. Therefore, a critical issue when studying PTMs in plant proteins is to ensure that the protein extraction method is the most appropriate, both at qualitative and quantitative levels. In this work, we compared five methods for protein extraction of the C4-photosynthesis related proteins, in the tip of fully expanded third-leaves. These included: TCA/Acetone Precipitation; Phenol Extraction; TCA/Acetone Precipitation followed by Phenol Extraction; direct extraction in Lysis Buffer (a urea-based buffer); and direct extraction in Lysis Buffer followed by Cleanup with a commercial kit. Protein extraction in Lysis Buffer performed better in comparison to the other methods. It gave one of the highest protein yields, good coverage of the extracted proteome and phosphoproteome, high reproducibility, and little protein degradation. This was also the easiest and fastest method, warranting minimal sample handling. We also show that this method is adequate for the successful extraction of key enzymes of the C4-photosynthetic metabolism, such as PEPC, PPDK, PEPCK, and NADP-ME. This was confirmed by MALDI-TOF/TOF MS analysis of excised spots of 2DE analyses of the extracted protein pools. Staining for phosphorylated proteins in 2DE revealed the presence of several phosphorylated isoforms of PEPC, PPDK, and PEPCK. PMID

  13. Quantum population and entanglement evolution in photosynthetic process

    Science.gov (United States)

    Zhu, Jing

    Applications of the concepts of quantum information theory are usually related to the powerful and counter-intuitive quantum mechanical effects of superposition, interference and entanglement. In this thesis, I examine the role of coherence and entanglement in complex chemical systems. The research has focused mainly on two related projects: The first project is developing a theoretical model to explain the recent ultrafast experiments on excitonic migration in photosynthetic complexes that show long-lived coherence of the order of hundreds of femtoseconds and the second project developing the Grover algorithm for global optimization of complex systems. The first part can be divided into two sections. The first section is investigating the theoretical frame about the transfer of electronic excitation energy through the Fenna-Matthews-Olson (FMO) pigment-protein complex. The new developed modified scaled hierarchical equation of motion (HEOM) approach is employed for simulating the open quantum system. The second section is investigating the evolution of entanglement in the FMO complex based on the simulation result via scaled HEOM approach. We examine the role of multipartite entanglement in the FMO complex by direct computation of the convex roof optimization for a number of different measures, including pairwise, triplet, quadruple and quintuple sites entanglement. Our results support the hypothesis that multipartite entanglement is maximum primary along the two distinct electronic energy transfer pathways. The second part of this thesis can be separated into two sections. The first section demonstrated that a modified Grover's quantum algorithm can be applied to real problems of finding a global minimum using modest numbers of quantum bits. Calculations of the global minimum of simple test functions and Lennard-Jones clusters have been carried out on a quantum computer simulator using a modified Grover's algorithm. The second section is implementing the basic

  14. Superradiance Transition and Nonphotochemical Quenching in Photosynthetic Complexes

    Energy Technology Data Exchange (ETDEWEB)

    Berman, Gennady Petrovich [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Nesterov, Alexander [Universidad de Guadalajara, Departamento de Fısica, Jalisco (Mexico); Lopez, Gustavo [Universidad de Guadalajara, Departamento de Fısica, Jalisco (Mexico); Sayre, Richard Thomas [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2015-04-23

    Photosynthetic organisms have evolved protective strategies to allow them to survive in cases of intense sunlight fluctuation with the development of nonphotochemical quenching (NPQ). This process allows light harvesting complexes to transfer the excess sunlight energy to non-damaging quenching channels. This report compares the NPQ process with the superradiance transition (ST). We demonstrated that the maximum of the NPQ efficiency is caused by the ST to the sink associated with the CTS. However, experimental verifications are required in order to determine whether or not the NPQ regime is associated with the ST transition for real photosynthetic complexes. Indeed, it can happen that, in the photosynthetic apparatus, the NPQ regime occurs in the “non-optimal” region of parameters, and it could be independent of the ST.

  15. Cyanobacteria as photosynthetic biocatalysts: a systems biology perspective.

    Science.gov (United States)

    Gudmundsson, Steinn; Nogales, Juan

    2015-01-01

    The increasing need to replace oil-based products and to address global climate change concerns has triggered considerable interest in photosynthetic microorganisms. Cyanobacteria, in particular, have great potential as biocatalysts for fuels and fine-chemicals. During the last few years the biotechnological applications of cyanobacteria have experienced an unprecedented increase and the use of these photosynthetic organisms for chemical production is becoming a tangible reality. However, the field is still immature and many concerns about the economic feasibility of the biotechnological potential of cyanobacteria remain. In this review we describe recent successes in biofuel and fine-chemical production using cyanobacteria. We discuss the role of the photosynthetic metabolism and highlight the need for systems-level metabolic optimization in order to achieve the true potential of cyanobacterial biocatalysts.

  16. Treatment of Chinese Traditional Medicine Wastewater by Photosynthetic Bacteria

    Institute of Scientific and Technical Information of China (English)

    WANG You-zhi; WANG Feng-jun; BAO Li

    2005-01-01

    The influence factors treating wastewater of Chinese traditional medicine extraction by photosynthetic bacteria are tested and discussed. The results indicate that the method of photosynthetic bacteria can eliminate COD and BCD from wastewater in high efficiency. And it also has high load shock resistance. On the conditions of slight aerobic and semi-darkness, treating wastewater of Chinese traditional medicine extraction, the method has better efficiency to eliminate COD and BOD from the wastewater than those by anaerobic illumination and aerobic darkness treatments. After pretreatment of hydrolytic acidization, the removal rate of COD in the wastewater reached more than 85 %, and that rate of BOD reached more than 90% in the treating system of photosynthetic bacteria. It may be more feasible and advantageous than traditional anaerobic biological process to treat organic wastewater using PSB system.

  17. Clinorotation affects mesophyll photosynthetic cells in leaves of pea seedlings.

    Science.gov (United States)

    Adamchuk, N I

    1998-07-01

    Experiments with autotrophs in altered gravity condition have a grate significant for development of space biology. The main results of investigation in the photosynthetic apparatus state under microgravity condition have based on the experiments with maturity plants and their differentiated cells. The structural and functional organization of photosynthetic cells in seedlings is poor understandable still. Along with chloroplasts preserving a native membrane system in palisade parenchyma cells of the 29-day pea plant leaves in microgravity, chloroplasts with fribly packed or damaged granae, whose thylakoids appeared as vesicles with an electrontransparent content, were also observed. The investigation of preceding process induced these effects have a sense. That is why, the goal of our experiments was to perform the study of a structural organization of the photosynthetic cells of 3-d pair of pea seedlings leaves under the influence of clinorotation.

  18. Emerging experimental and computational technologies for purpose designed engineering of photosynthetic prokaryotes

    KAUST Repository

    Lindblad, Peter

    2016-01-25

    With recent advances in synthetic molecular tools to be used in photosynthetic prokaryotes, like cyanobacteria, it is possible to custom design and construct microbial cells for specific metabolic functions. This cross-disciplinary area of research has emerged within the interfaces of advanced genetic engineering, computational science, and molecular biotechnology. We have initiated the development of a genetic toolbox, using a synthetic biology approach, to custom design, engineer and construct cyanobacteria for selected function and metabolism. One major bottleneck is a controlled transcription and translation of introduced genetic constructs. An additional major issue is genetic stability. I will present and discuss recent progress in our development of genetic tools for advanced cyanobacterial biotechnology. Progress on understanding the electron pathways in native and engineered cyanobacterial enzymes and heterologous expression of non-native enymzes in cyanobacterial cells will be highlighted. Finally, I will discuss our attempts to merge synthetic biology with synthetic chemistry to explore fundamantal questions of protein design and function.

  19. 从Embedded Visual C++4.0到Visual Studio 2005的迁移策略%Transfer Strategy from Embedded Visual C++4.0 to Visual Stud io 2005

    Institute of Scientific and Technical Information of China (English)

    吉向东

    2009-01-01

    文章讨论了从Embedded Visual C++4.0到Visual Studio 2005的迁移策略.由于微软不再对Embedded Visual C++4.0提供支持,往Visual Studio 2005的迁移,就成为原有系统的必然选择.本文详细讨论了从Embedded Visual C++4.0到Visual Studio 2005的项目迁移策略,可能出现的错误以及迁移过程中的注意事项.对具体的项目迁移实践有较强的指导意义.

  20. Measurements of ionization and attachment coefficients in 0.468% and 4.910% c-C4F8/Ar mixtures and pure c-C4F8

    International Nuclear Information System (INIS)

    We measured the density normalized ionization coefficients and attachment coefficients in diluted c-C4F8/Ar mixtures and in pure perfluorocyclobutane (c-C4F8) by the steady-state Townsend method. The ionization coefficients in the mixture gas are almost equal to those in pure argon at the high E/N range but differ considerably at the low E/N range. The present coefficients in pure c-C4F8 agree well with previously reported values at the high E/N range, but there are significant differences at the low E/N range. Measurements in the low E/N range were difficult, and there are few data of the attachment coefficients

  1. Catalytic reactions of C4 hydrocarbons on the fluid catalytic cracking catalyst%C4烃类在催化裂化催化剂上催化转化反应的研究

    Institute of Scientific and Technical Information of China (English)

    闫平祥; 孟祥海; 徐春明; 高金森

    2008-01-01

    The catalytic reactions of C4 hydrocarbons on a fluid catalytic cracking (FCC) catalyst were studied in a confined fluidized bed reactor. The effect of reaction temperature and space velocity on product yields and distribution was investigated. The results show that the FCC catalyst has the good performance of aromatization and cracking of C4 hydrocarbons and can be used to produce propylene and aromatics under the suitable reaction conditions. It is mainly the butylene in the C4 hydrocarbons that undergoes catalytic reactions over the FCC catalyst and butane is hard to convert. Low reaction temperature favors the production of aromatics, while high reaction temperature favors the production of propylene. Low space velocity is beneficial to promote the conversion of butylene and the production of both aromatics and propylene. According to the bimolecular mechanism and reaction results, the reaction network for the catalytic reactions of C4 hydrocarbons on the FCC catalyst is proposed. The analysis on the this reaction mechanism indicates that the main reason of resulting in the lower yields of ethylene and propylene could be the poor secondary cracking performances of C5 and C6 olefins formed in the catalytic conversion of C4 hydrocarbons on the FCC catalyst.%利用小型固定流化床实验装置,对C4烃类在催化裂化催化剂上催化转化反应规律进行了实验研究,考察了不同反应温度及空速对C4烃类催化转化反应的产物分布和组成的影响.实验结果表明,催化裂化催化剂对C4烃类具有一定芳构化和裂化性能,在适宜的反应条件下,可增产芳烃和丙烯;在C4烃类催化转化过程中,丁烯是主要的反应物,而丁烷几乎不反应;低反应温度有利于增产芳烃,高反应温度有利于增产丙烯.较低的空速对增产芳烃和丙烯都有利.根据双分子反应机理和反应结果 ,建立了C4烃类在催化裂化催化剂上催化转化过程的反应网络.对C4烃类催化转化

  2. Coherent changes in relative C4 plant productivity and climate during the late Quaternary in the North American Great Plains

    Science.gov (United States)

    Nordt, L.; Von Fischer, J.; Tieszen, L.; Tubbs, J.

    2008-01-01

    Evolution of the mixed and shortgrass prairie of the North American Great Plains is poorly understood because of limited proxies available for environmental interpretations. Buried soils in the Great Plains provide a solution to the problem because they are widespread both spatially and temporally with their organic reservoirs serving as a link to the plants than once grew on them. Through stable carbon isotopic analysis of soil organic carbon (??13C), the percent carbon from C4 plants (%C4) can be ascertained. Because C4 plants are primarily warm season grasses responding positively to summer temperature, their representation has the added advantage of serving as a climate indicator. To better understand grassland and climate dynamics in the Great Plains during the last 12 ka (ka=1000 radiocarbon years) we developed an isotopic standardization technique by: determining the difference in buried soil ??13C and modern soil ??13C expected for that latitude (????13C), and transferring the ????13C to ??%C4 (% C4) using mass balance calculations. Our analysis reveals two isotopic stages in the mixed and shortgrass prairie of the Great Plains based on trends in ??%C4. In response to orbital forcing mechanisms, ??%C4 was persistently below modern in the Great Plains between 12 and 6.7 ka (isotopic stage II) evidently because of the cooling effect of the Laurentide ice sheet and proglacial lakes in northern latitudes, and glacial meltwater pulses cooling the Gulf of Mexico and North Atlantic Ocean. The ??%C4 after 6.7 ka (isotopic stage I) increased to modern levels as conditioned by the outflow of warm, moist air from the Gulf of Mexico and dry incursions from the west that produced periodic drought. At the millennial-scale, time series analysis demonstrates that ??%C4 oscillated with 0.6 and 1.8 ka periodicities, possibly governed by variations in solar irradiance. Our buried soil isotopic record correlates well with other environmental proxy from the Great Plains and

  3. Deficiencia congénita de complemento: C3 y C4: Comunicación de un caso clínico Congenital deficiency of the C3 and C4 fractions of complement: A clinical report

    Directory of Open Access Journals (Sweden)

    ALEXIS STRICKLER P

    2006-06-01

    Full Text Available La deficiencia congénita del 3er constituyente del Complemento (C3 es extremadamente rara, y se expresa clínicamente como un defecto de la inmunidad humoral. Se comunica un caso de deficiencia C3 y C4 en un lactante de sexo femenino de 1 año de edad, hijo de padres consanguíneos, que presentó un cuadro de meningoencefalitis aguda de etiología no precisada, con secuela neurológica severa e infecciones bacterianas recurrentes, respiratorias y urinarias, septicemia y osteomielitis, con respuesta parcial a antimicrobianos. El estudio de inmunidad humoral y celular (subpoblaciones linfocitarias, inmunoglobulinas séricas y subclases de IgG fue normal, demostrándose déficit de C3 y C4 con CH50 ausente en la niña y cifras bajas de C3 y C4, cercanas al 50% del valor normal en ambos padresCongenital deficiency of C3 fraction of the complement is a very rare condition. Clinically it is expressed as a deficiency of the humoral immunity. We report a case of C3 and C4 deficiency in a 1 year old infant girl. Her parents have a high consanguinity. She presented an acute meningoencephalitis of unknown etiology, and she evolved with severe neurological damage, and recurrent respiratory and urinary bacterial infections, sepsis and osteomielitis, with partial response to antimicrobials. The tests to investigate humoral and cellular immune response (lymphocyte subpopulations, serum immunoglobulins and subtypes of IgG were normal. The patient had a deficit of C3 and C4, mainly C3, with absence of CH50. Both of her parents had C3 and C4 about 50% of normal values, and CH50 slightly under the normal values

  4. Energy transfer in real and artificial photosynthetic systems

    Energy Technology Data Exchange (ETDEWEB)

    Hindman, J.C.; Hunt, J.E.; Katz, J.J.

    1995-02-01

    Fluorescence emission from the photosynthetic organisms Tribonema aequale, Anacystis nidulau, and Chlorelia vulgais and from some chlorophyll model systems have been recorded as a function of excitation wavelength and temperature. Considerable similarity was observed in the effects of excitation wavelength and temperature on the fluorescence from intact photosynthetic organisms and the model systems. The parallelism in behavior suggest that self-assembly processes may occur in both the in vivo and in vitro systems that give rise to chlorophyll species at low temperature that may differ significantly from those present at ambient temperatures.

  5. Late Pleistocene C4 plant dominance and summer rainfall in the southwestern United States from isotopic study of herbivore teeth

    Science.gov (United States)

    Connin, S.L.; Betancourt, J.; Quade, Jay

    1998-01-01

    Patterns of climate and C4 plant abundance in the southwestern United States during the last glaciation were evaluated from isotopic study of herbivore tooth enamel. Enamel ??13C values revealed a substantial eastward increase in C4 plant consumption for Mammuthus spp., Bison spp., Equus spp., and Camelops spp. The ??13C values were greatest in Bison spp. (-6.9 to + 1.7???) and Mammuthus spp. (-9.0 to +0.3???), and in some locales indicated C4-dominated grazing. The ??13C values of Antilocaprids were lowest among taxa (-12.5 to -7.9???) and indicated C3 feeding at all sites. On the basis of modern correlations between climate and C4 grass abundance, the enamel data imply significant summer rain in parts of southern Arizona and New Mexico throughout the last glaciation. Enamel ??18O values range from +19.0 to +31.0??? and generally increase to the east. This pattern could point to a tropical or subtropical source of summer rainfall. At a synoptic scale, the isotope data indicate that interactions of seasonal moisture, temperature, and lowered atmospheric pCO2 determined glacial-age C4 abundance patterns.

  6. The Electronegativity Analysis of c-C4F8 as a Potential Insulation Substitute of SF6

    Science.gov (United States)

    Zhao, Xiaoling; Jiao, Juntao; Li, Bing; Xiao, Dengming

    2016-03-01

    The density distributions related to gas electronegativity for c-C4F8 gas, including negative ion, electron number and electron energy densities in the discharge process, are derived theoretically in both plane-to-plane and point-to-plane electrode geometries. These calculations have been performed through the Boltzmann equation in the condition of a steady-state Townsend (SST) experiment and a fluid model in the condition of both uniform and non-uniform electric fields. The electronegativity coefficients a = n-/ne of c-C4F8 and SF6 are compared to further describe the electron affinity of c-C4F8. The result shows that c-C4F8 represents an obvious electron-attachment performance in the discharge process. However, c-C4F8 still has much weaker gas electronegativity than SF6, whose electronegativity coefficient is lower than that of SF6 by at least three orders of magnitude. supported by National Natural Science Foundation of China (No. 51337006)

  7. Development of a Novel Cast 6351 Al-Al4SiC4 In Situ Composite

    Science.gov (United States)

    Mondal, Manas Kumar; Biswas, Koushik; Maity, Joydeep

    2013-11-01

    In this research work 6351 Al-Al4SiC4 composite has been developed through stir casting route with incorporation of fine TiC powder in 6351 Al melt. During stir casting, round shaped Al4SiC4 particles were generated as TiC reacted with molten aluminum. These Al4SiC4 particles were found to be acting as nucleation sites for primary α (causing grain refinement) along with engulfment effects promoting particle distribution without clustering. Furthermore, as the volume fraction of Al4SiC4 particles increased, the proportion of dendritic region decreased (more equiaxed grains appeared) and the overall grain size of the matrix decreased. This resulted in an improved strength and ductility of the composite. Equations were developed with a reasonable accuracy correlating the strength with microstructural parameters. An excellent combination of strength (UTS = 215 MPa) and ductility (%Elongation = 10) was obtained for 6351 Al-7 vol.% Al4SiC4 composite as compared to base cast 6351 Al alloy (UTS = 121 MPa, %Elongation = 3).

  8. The diverse electronic properties of C4N3 monolayer under biaxial compressive strain: a theoretical study

    Science.gov (United States)

    Wu, Haiping; Liu, Yuzhen; Kan, Erjun; Ma, Yanming; Xu, Wenjie; Li, Jie; Yan, Meichen; Lu, Ruifeng; Wei, Jianfeng; Qian, Yan

    2016-07-01

    Because of the observation of half-metallicity in graphitic carbon nitride C4N3 (g-C4N3), extensive research has recently been focused on this compound. Using density-functional calculations, herein diverse electronic properties of g-C4N3 were engineered by applying biaxial compressive strain. The calculated results demonstrate that g-C4N3 preserves ferromagnetic half-metallicity when the strain is lower than  ‑2%, accompanied by a decrease of the half-metallic gap. When the compressive strain ranges from  ‑5 to  ‑3%, the compound turns into nonmagnetic metal. By increasing the strain on the end, it becomes a nonmagnetic semiconductor. Further investigations show that all nonmagnetic semiconductors possess a direct band gap with a value of around 1.6 eV. This fact indicates that g-C4N3 can be applied in spintronic or photovoltaic fields under a strain environment.

  9. Engineering a cyanobacterium as the catalyst for the photosynthetic conversion of CO2 to 1,2-propanediol

    Directory of Open Access Journals (Sweden)

    Li Han

    2013-01-01

    Full Text Available Abstract Background The modern society primarily relies on petroleum and natural gas for the production of fuels and chemicals. One of the major commodity chemicals 1,2-propanediol (1,2-PDO, which has an annual production of more than 0.5 million tons in the United States, is currently produced by chemical processes from petroleum derived propylene oxide, which is energy intensive and not sustainable. In this study, we sought to achieve photosynthetic production of 1,2-PDO from CO2 using a genetically engineered cyanobacterium Synechococcus elongatus PCC 7942. Compared to the previously reported biological 1,2-PDO production processes which used sugar or glycerol as the substrates, direct chemical production from CO2 in photosynthetic organisms recycles the atmospheric CO2 and will not compete with food crops for arable land. Results In this study, we reported photosynthetic production of 1,2-PDO from CO2 using a genetically engineered cyanobacterium Synechococcus elongatus PCC 7942. Introduction of the genes encoding methylglyoxal synthase (mgsA, glycerol dehydrogenase (gldA, and aldehyde reductase (yqhD resulted in the production of ~22mg/L 1,2-PDO from CO2. However, a comparable amount of the pathway intermediate acetol was also produced, especially during the stationary phase. The production of 1,2-PDO requires a robust input of reducing equivalents from cellular metabolism. To take advantage of cyanobacteria’s NADPH pool, the synthetic pathway of 1,2-PDO was engineered to be NADPH-dependent by exploiting the NADPH-specific secondary alcohol dehydrogenases which have not been reported for 1,2-PDO production previously. This optimization strategy resulted in the production of ~150mg/L 1,2-PDO and minimized the accumulation of the incomplete reduction product, acetol. Conclusion This work demonstrated that cyanobacteria can be engineered as a catalyst for the photosynthetic conversion of CO2 to 1,2-PDO. This work also characterized two NADPH

  10. An assay for the mannan-binding lectin pathway of complement activation

    DEFF Research Database (Denmark)

    Petersen, Steen Vang; Thiel, S; Jensen, L;

    2001-01-01

    activation. Therefore, in a generally applicable complement activation assay specific for the MBL pathway, the activity of the classical pathway must be inhibited. This can be accomplished by exploiting the finding that high ionic strength buffers inhibit the binding of C1q to immune complexes and disrupt......). When bound to microorganisms, the MBL complex activates the complement components C4 and C2, thereby generating the C3 convertase and leading to opsonisation by the deposition of C4b and C3b fragments. This C4/C2 cleaving activity is shared with the C1 complex of the classical pathway of complement...... the C1 complex, whereas the carbohydrate-binding activity of MBL and the integrity of the MBL complex is maintained under hypertonic conditions. In the assay described here, the specific C4b-depositing capacity of the MBL pathway was determined by incubating serum diluted in buffer containing 1 M Na...

  11. ENHANCED PRACTICAL PHOTOSYNTHETIC CO2 MITIGATION

    Energy Technology Data Exchange (ETDEWEB)

    Dr. Gregory Kremer; Dr. David J. Bayless; Dr. Morgan Vis; Dr. Michael Prudich; Dr. Keith Cooksey; Dr. Jeff Muhs

    2001-10-15

    This report documents significant achievements in the Enhanced Practical Photosynthetic CO{sub 2} Mitigation project during the period from 10/03/2000 through 10/02/2001. Most of the achievements are milestones in our efforts to complete the tasks and subtasks that constitute the project objectives. This is the fourth quarterly report for this project, so it also serves as a year-1 project review. We have made significant progress on our Phase I objectives, and our current efforts are focused on fulfilling these research objectives ''on time'' relative to the project timeline. Overall, we believe that we are on schedule to complete Phase I activities by 10/2002, which is the milestone date from the original project timeline. Our results to date concerning the individual factors which have the most significant effect on CO{sub 2} uptake are inconclusive, but we have gathered useful information about the effects of lighting, temperature and CO{sub 2} concentration on one particular organism (Nostoc) and significant progress has been made in identifying other organisms that are more suitable for use in the bioreactor due to their better tolerance for the high temperatures likely to be encountered in the flue gas stream. Our current tests are focused on one such thermophilic organism (Cyanidium), and an enlarged bioreactor system (CRF-2) has been prepared for testing this organism. Tests on the enhanced mass transfer CO{sub 2} absorption technique are underway and useful information is currently being collected concerning pressure drop. The solar collectors for the deep-penetration hybrid solar lighting system have been designed and a single solar collector tracking unit is being prepared for installation in the pilot scale bioreactor system currently under construction. Much progress has been made in designing the fiber optic light delivery system, but final selection of the ''optimum'' delivery system design depends on many

  12. Enhanced Practical Photosynthetic CO2 Mitigation

    Energy Technology Data Exchange (ETDEWEB)

    Gregory Kremer; David J. Bayless; Morgan Vis; Michael Prudich; Keith Cooksey; Jeff Muhs

    2003-07-22

    This quarterly report documents significant achievements in the Enhanced Practical Photosynthetic CO{sub 2} Mitigation project during the period from 4/2/2003 through 7/01/2003. As indicated in the list of accomplishments below we have completed some long-term model scale bioreactor tests and are prepared to begin pilot scale bioreactor testing. Specific results and accomplishments for the second quarter of 2003 include: (1) Bioreactor support systems and test facilities: (a) Qualitative long-term survivability tests for S.C.1.2(2) on Omnisil have been successfully completed and results demonstrate a growth rate that appears to be acceptable. (b) Quantitative tests of long-term growth productivity for S.C.1.2(2) on Omnisil have been completed and initial results are promising. Initial results show that the mass of organisms doubled (from 54.9 grams to 109.8 grams) in about 5 weeks. Full results will be available as soon as all membranes and filters are completely dried. The growth rate should increase significantly with the initiation of weekly harvesting during the long term tests. (c) The phase 1 construction of the pilot scale bioreactor has been completed, including the solar collector and light distribution system. We are now in the phase of system improvement as we wait for CRF-2 results in order to be able to finalize the design and construction of the pilot scale system. (d) A mass transfer experimental setup was constructed in order to measure the mass transfer rate from the gas to the liquid film flowing over a membrane and to study the hydrodynamics of the liquid film flowing over a membrane in the bioreactor. Results were reported for mass transfer coefficient, film thickness, and fluid velocity over an Omnisil membrane with a ''drilled hole'' header pipe design. (2) Organisms and Growth Surfaces: (a) A selectivity approach was used to obtain a cyanobacterial culture with elevated resistance to acid pH. Microlonies of ''3

  13. ENHANCED PRACTICAL PHOTOSYNTHETIC CO2 MITIGATION

    Energy Technology Data Exchange (ETDEWEB)

    Dr. Gregory Kremer; Dr. David J. Bayless; Dr. Morgan Vis; Dr. Michael Prudich; Dr. Keith Cooksey; Dr. Jeff Muhs

    2002-01-15

    This quarterly report documents significant achievements in the Enhanced Practical Photosynthetic CO{sub 2} Mitigation project during the period from 10/3/2001 through 1/02/2002. Most of the achievements are milestones in our efforts to complete the tasks and subtasks that constitute the project objectives. Our research team has made significant progress towards completion of our Phase I objectives, and our current efforts remain focused on fulfilling these research objectives in accordance with the project timeline. Overall, we believe that we are on schedule to complete Phase I activities by 10/2002, which is the milestone date from the original project timeline. Specific results and accomplishments for the fourth quarter of 2001 include: (1) New procedures and protocols have been developed to increase the chances of successful implementation in the bioreactor of organisms that perform well in the lab. The new procedures include pre-screening of organisms for adhesion characteristics and a focus on identifying the organisms with maximum growth rate potential. (2) Preliminary results show an increase in adhesion to glass and a decrease in overall growth rates when using growth media prepared with tap water rather than distilled water. (3) Several of the organisms collected from Yellowstone National Park using the new procedures are currently being cultured in preparation for bioreactor tests. (4) One important result from a test of growth surface temperature distribution as a function of gas stream and drip-fluid temperatures showed a high dependence of membrane temperature on fluid temperature, with gas stream temperature having minimal effect. This result indicates that bioreactor growth surface temperatures can be controlled using fluid delivery temperature. The possible implications for implementation of the bioreactor concept are encouraging, since it may be possible to use the bioreactor with very high gas stream temperatures by controlling the temperature

  14. ENHANCED PRACTICAL PHOTOSYNTHETIC CO2 MITIGATION

    Energy Technology Data Exchange (ETDEWEB)

    Dr. Gregory Kremer; Dr. David J. Bayless; Dr. Morgan Vis; Dr. Michael Prudich; Dr. Keith Cooksey; Dr. Jeff Muhs

    2002-07-15

    This quarterly report documents significant achievements in the Enhanced Practical Photosynthetic CO{sub 2} Mitigation project during the period from 4/2/2001 through 7/01/2002. Most of the achievements are milestones in our efforts to complete the tasks and subtasks that constitute the project objectives, and we are currently on schedule to complete Phase I activities by 10/2002, the milestone date from the original project timeline. As indicated in the list of accomplishments below, our efforts are focused on improving the design of the bioreactor test system, evaluating candidate organisms and growth surfaces, and scaling-up the test facilities from bench scale to pilot scale. Specific results and accomplishments for the second quarter of 2002 include: Organisms and Growth Surfaces: (1) Our collection of cyanobacteria, isolated in YNP was increased to 15 unialgal cultures. (2) Illumination rate about 50 {micro}E/m{sup 2}/sec is not saturated for the growth of 1.2 s.c. (2) isolate. The decrease of illumination rate led to the decrease of doubling time of this isolate. (3) The positive effect of Ca{sup 2+} on the growth of isolate 1.2 s.c. (2) without Omnisil was revealed, though Ca{sup 2+} addition was indifferent for the growth of this isolate at the presence of Omnisil. (4) Calcium addition had a positive effect on the generation of cyanobacterial biofilm on Omnisil surface. (5) The survivability problems with the Tr9.4 organism on Omnisil screens in the CRF2 model-scale bioreactor have been solved. The problems were related to the method used to populate the growth surfaces. When pre-populated screens were placed in the bioreactor the microalgae died within 72 hours, but when the microalgae were cultured while in place in the bioreactor using a continuous-population method they grew well inside of the CRF2 test system and survived for the full 7-day test duration. CRF2 tests will continue as soon as the new combined drip system/harvesting system header pipe

  15. An Attempt to Observe Debris from the Breakup of a Titan 3C-4 Transtage

    Science.gov (United States)

    Barker, E. S.; Matney, M. J.; Yanagisawa, T.; Liou, J.-C.; Abercromby, K. J.; Rodriquez, H. M.; Horstman, M. F.; Seitzer, P.

    2007-01-01

    In February 2007 dedicated observations were made of the orbital space predicted to contain debris from the breakup of the Titan 3C-4 transtage back on February 21, 1992. These observations were carried out on the Michigan Orbital DEbris Survey Telescope (MODEST) in Chile with its 1.3deg field of view. The search region or orbital space (inclination and right ascension of the ascending node (RAAN) was predicted using NASA#s LEGEND (LEO-to-GEO Environment Debris) code to generate a Titan debris cloud. Breakup fragments are created based on the NASA Standard Breakup Model (including fragment size, area-to-mass (A/M), and delta-V distributions). Once fragments are created, they are propagated forward in time with a subroutine GEOPROP. Perturbations included in GEOPROP are those due to solar/lunar gravity, radiation pressure, and major geopotential terms. Barker, et. al, (AMOS Conference Proceedings, 2006, pp. 596-604) used similar LEGEND predictions to correlate survey observations made by MODEST (February 2002) and found several possible night-to-night correlations in the limited survey dataset. One conc lusion of the survey search was to dedicate a MODEST run to observing a GEO region predicted to contain debris fragments and actual Titan debris objects (SSN 25000, 25001 and 30000). Such a dedicated run was undertaken with MODEST between February 17 and 23, 2007 (UT dates). MODEST#s limiting magnitude of 18.0 (S\\N approx.10) corresponds to a size of 22cm assuming a diffuse Lambertian albedo of 0.2. However, based on observed break-up data, we expect most debris fragments to be smaller than 22cm which implies a need to increase the effective sensitivity of MODEST for smaller objects. MODEST#s limiting size can be lowered by increasing the exposure time (20 instead of 5 seconds) and applying special image processing. The special processing combines individual CCD images to detect faint objects that are invisible on a single CCD image. Sub-images are cropped from six

  16. Effects of Temperature and Humidity on the Characterization of C-4 Explosive Threats

    Energy Technology Data Exchange (ETDEWEB)

    C. J. Miller

    2012-06-01

    The amount of time that an explosive is present on the surface of a material is dependent upon the original amount of explosive on the surface, adhesive forces, temperature and humidity, as well as other environmental factors. This laboratory study focused on evaluating RDX crystal morphology changes resulting from variations in temperature and humidity conditions of the sample. The temperature and humidity conditions were controlled using a Tenney THRJ environmental chamber and a Tenney T11RC-1.5 environmental chamber. These chambers allow the temperature and humidity to be held within ±3°C and ±5% RH. The temperature and humidity conditions used for this test series were: 40°F/40%RH, ~70°F/20%RH (samples left on benchtop), 70°F/70%RH, 70°F/95%RH, 95°F/40%RH, 95°F/70%RH, and 95°F/95%RH. These temperature and humidity set points were chosen to represent a wide range of conditions that may be found in real world scenarios. C-4 (RDX crystals and binder material) was deposited on the surface of one of six substrates by placing a fingerprint from the explosive block onto the matrix surface. The substrates were chosen to provide a range of items that are commonly used. Six substrate types were used during these tests: 50% cotton/50% polyester as found in T-shirts, 100% cotton with a smooth surface such as that found in a cotton dress shirt, 100% cotton on a rough surface such as that found on canvas or denim, suede leather such as might be found on jackets, purses, or shoes, painted metal obtained from a junked car hood, and a computer diskette. The samples were not pre-cleaned prior to testing and contained sizing agents, and in the case of the metal: oil, dirt, scratches, and rust spots. The substrates were photographed at various stages of testing, using a Zeiss Discover V12 stereoscope with Axiocam ICc1 3 megapixel digital camera, to determine any changes in the crystalline morphology. Some of the samples were examined using scanning electron microscopy

  17. Azospirillum doebereinerae sp. nov., a nitrogen-fixing bacterium associated with the C4-grass Miscanthus.

    Science.gov (United States)

    Eckert, B; Weber, O B; Kirchhof, G; Halbritter, A; Stoffels, M; Hartmann, A

    2001-01-01

    A new group of nitrogen-fixing Azospirillum sp. bacteria was isolated from the roots of the C4-gramineous plant Miscanthus. Polyphasic taxonomy was performed, including auxanography using API galleries, physiological tests and 16S rRNA sequence comparison. The ability of the isolates to fix dinitrogen was evaluated by amplification of the nifD gene, immunodetection of the dinitrogenase reductase and acetylene-reduction assay. On the basis of these results, the nitrogen-fixing isolates represent a new species within the genus Azospirillum. Its closest phylogenetic neighbours, as deduced by 16S rDNA-based analysis, are Azospirillum lipoferum, Azospirillum largimobile and Azospirillum brasilense with 96.6, 96.6 and 95.9% sequence similarity, respectively. Two 16S rRNA-targeting oligonucleotide probes were developed which differentiate the new species from the other Azospirillum species by whole-cell fluorescence hybridization. Strains of the new species are curved rods or S-shaped, 1.0-1.5 microm in width and 2,0-3.0 microm in length, Gram-negative and motile with a single polar flagellum. Optimum growth occurs at 30 degrees C and at pH values between 6.0 and 7.0. No growth takes place at 37 degrees C. They have a respiratory type of metabolism, grow well on arabinose, D-fructose, gluconate, glucose, glycerol, malate, mannitol and sorbitol. They differ from A. largimobile and A. lipoferum by their inability to use N-acetylglucosamine and D-ribose, from A. lipoferum by their ability to grow without biotin supplementation and from A. brasilense by their growth with D-mannitol and D-sorbitol as sole carbon sources. Nitrogen fixation occurs in microaerobic nitrogen-limited conditions. For this species, the name Azospirillum doebereinerae sp. nov. is suggested, with strain GSF71T as the type strain (= DSM 13131T; reference strain Ma4 = DSM 13400). Its G+C content is 70.7 mol%.

  18. Photosynthetic bacteria as alternative energy sources: overview on hydrogen production research

    Energy Technology Data Exchange (ETDEWEB)

    Mitsui, A.; Ohta, Y.; Frank, J.

    1979-01-01

    Hydrogen production research towards the application of marine and non-marine species of photosynthetic bacteria is reviewed. Potential use of photosynthetic bacteria as renewable energy resources is discussed.

  19. On the photosynthetic and devlopmental responses of leaves to the spectral composition of light

    NARCIS (Netherlands)

    Hogewoning, S.W.

    2010-01-01

    Key words: action spectrum, artificial solar spectrum, blue light, Cucumis sativus, gas-exchange, light-emitting diodes (LEDs), light interception, light quality, non-photosynthetic pigments, photo-synthetic capacity, photomorphogenesis, photosystem excitation balance, quantum yield, red light. A

  20. Ionic liquid, glass or crystalline solid? Structures and thermal behaviour of (C4mim)2CuCl3.

    Science.gov (United States)

    Zürner, Philipp; Schmidt, Horst; Bette, Sebastian; Wagler, Jörg; Frisch, Gero

    2016-02-28

    The ionic liquid (C4mim)2CuCl3 was synthesised from a mixture of copper(i) chloride and 1-butyl-3-methylimidazolium chloride (C4mimCl) and investigated using crystallographic and thermoanalytical methods. In the crystalline state, the compound consists of C4mim(+) cations and triangular [CuCl3](2-) anions and forms three different modifications, which are connected through phase transitions at 227 and 203 K. The high and intermediate temperature phases crystallise in the space group C2, whereas the low temperature phase exhibits the space group P21. The three crystal structures are related through an isomorphic and a klassengleiche symmetry transition, respectively. The solid undergoes congruent melting at 320 K. The enthalpy of fusion was determined to be 25.7 kJ mol(-1). The melting process is irreversible and the ionic liquid can be supercooled to its glass transition at 221 K. PMID:26785819

  1. Antiviral Activity of Hederasaponin B from Hedera helix against Enterovirus 71 Subgenotypes C3 and C4a.

    Science.gov (United States)

    Song, Jaehyoung; Yeo, Sang-Gu; Hong, Eun-Hye; Lee, Bo-Ra; Kim, Jin-Won; Kim, Jeonghoon; Jeong, Hyeongun; Kwon, Yongsoo; Kim, Hyunpyo; Lee, Sangwon; Park, Jae-Hak; Ko, Hyun-Jeong

    2014-01-01

    Enterovirus 71 (EV71) is the predominant cause of hand, foot and mouth disease (HFMD). The antiviral activity of hederasaponin B from Hedera helix against EV71 subgenotypes C3 and C4a was evaluated in vero cells. In the current study, the antiviral activity of hederasaponin B against EV71 C3 and C4a was determined by cytopathic effect (CPE) reduction method and western blot assay. Our results demonstrated that hederasaponin B and 30% ethanol extract of Hedera helix containing hederasaponin B showed significant antiviral activity against EV71 subgenotypes C3 and C4a by reducing the formation of a visible CPE. Hederasaponin B also inhibited the viral VP2 protein expression, suggesting the inhibition of viral capsid protein synthesis.These results suggest that hederasaponin B and Hedera helix extract containing hederasaponin B can be novel drug candidates with broad-spectrum antiviral activity against various subgenotypes of EV71. PMID:24596620

  2. 毕加索密码——雪铁龙C4毕加索试驾

    Institute of Scientific and Technical Information of China (English)

    徐钢; 林浩(摄影)

    2009-01-01

    提到雪铁龙“毕加索”,大家熟知的肯定是东风雪铁龙国产的萨拉毕加索,其实那是雪铁龙在2001年推出的车型。2006年,雪铁龙在欧洲推出了新一代毕加索,它建立在C4平台上,名为C4 Picasso。其后还衍生出五座版本,原先的七座版则升级为Grand C4 Picasso,即现在进口中国的这款。

  3. 毕加索密码 雪铁龙C4 毕加索试驾

    Institute of Scientific and Technical Information of China (English)

    徐钢; 林浩

    2009-01-01

    提到雪铁龙"毕加索",大家熟知的肯定是东风雪铁龙国产的萨拉毕加索,其实那是雪铁龙在2001年推出的车型。2006年,雪铁龙在欧洲推出了新一代毕加索,它建立在C4平台上,名为C4 Picasso。其后还衍生出五座版本,原先的七座版则升级为Grand C4 Picasso,即现在进口中国的这款。

  4. Dry Sliding Wear Behavior of a Novel 6351 Al-Al4SiC4 Composite

    Science.gov (United States)

    Mondal, Manas Kumar; Biswas, Koushik; Saha, Atanu; Maity, Joydeep

    2015-02-01

    In this research work the dry sliding wear behavior of 6351 Al alloy and 6351 Al based composites possessing varying amount of (2-7 vol.%) in situ Al4SiC4 reinforcement was investigated at low sliding speed (1 m/s) against a hardened EN 31 disk at different loads. In general, the wear mechanism involved adhesion and