WorldWideScience

Sample records for bus bar splices

  1. Resistance of LHC main bus bar splices at room temperature and at 77.4 K

    CERN Document Server

    Heck, S; Scheuerlein, Chr; CERN. Geneva. TE Department

    2009-01-01

    As part of the quality control the resistance of newly produced LHC main bus bar splices is now routinely measured at room temperature (RT) in order to conclude on the electrical continuity of the bus bar stabiliser across the splice under operating conditions. In this note we present splice resistance measurements that have been performed at RT and in liquid nitrogen (LN) in the CERN Cryolab with “ideal” splices (represented by continuous dipole and quadrupole bus bars), and with dipole and quadrupole splices with different defects, which cause an additional RT splice resistance of up to 60 µΩ. The RT resistance (RRT) results obtained with the Cryolab set-up are compared to the calculated resistance values and with the so-called R-8 and R-16 resistance results, as they are measured in the LHC tunnel with a Digital Low Resistance Ohmmeter with a voltage tap distance of 8 cm or 16 cm. The RT to LN resistance ratio has been determined for all splices in order to study the influence of the resistance of th...

  2. Heat Transfer in the LHC Main Superconducting Bus Bars

    CERN Document Server

    Granieri, P P; Richter, D

    2011-01-01

    CERN is performing a systematic analysis of the interconnecting bus bars of the Large Hadron Collider (LHC) main magnets. Their thermal, electrical, mechanical and hydraulic performances are addressed. In the frame of these studies, the heat transfer between the main superconducting (SC) bus bars and the surrounding He bath is investigated. It represents a key parameter in the comprehension of the bus bars stability and quench propagation mechanisms, thus crucial for the analysis of the 2008 incident which was triggered by a defective bus bars joint. This paper reports on the experimental tests and relative analysis aiming at describing the thermal behavior of the LHC main bus bars.

  3. A train for the bus(bars)

    CERN Multimedia

    CERN Bulletin

    2013-01-01

    On 8 April, the first SMACC (Superconducting Magnets and Circuits Consolidation) teams began work in the LHC tunnel. They are responsible for opening the interconnects between the magnets, laying the groundwork for the series of operations that will be performed by the team riding the ‘consolidation train’.   A technician installs the machine tool that allows them to prepare the surface of the section of the bar where the shunt will be fixed. The LHC’s 1,670 dipoles and quadrupoles are powered by power converters and connected by copper 'busbars’. The superconducting cables run through these bars, carrying a current of up to 11,850 amps. Six superconducting cables meet at each interconnect, where they are held together by a soldered (see box) electrical connection sandwiched between two pieces of copper, forming the splice between the busbars of the neighbouring magnets. The integrity of the electrical circuit is depen...

  4. Bus bar electrical feedthrough for electrorefiner system

    Science.gov (United States)

    Williamson, Mark; Wiedmeyer, Stanley G; Willit, James L; Barnes, Laurel A; Blaskovitz, Robert J

    2013-12-03

    A bus bar electrical feedthrough for an electrorefiner system may include a retaining plate, electrical isolator, and/or contact block. The retaining plate may include a central opening. The electrical isolator may include a top portion, a base portion, and a slot extending through the top and base portions. The top portion of the electrical isolator may be configured to extend through the central opening of the retaining plate. The contact block may include an upper section, a lower section, and a ridge separating the upper and lower sections. The upper section of the contact block may be configured to extend through the slot of the electrical isolator and the central opening of the retaining plate. Accordingly, relatively high electrical currents may be transferred into a glovebox or hot-cell facility at a relatively low cost and higher amperage capacity without sacrificing atmosphere integrity.

  5. Constant of heat conduction and stabilization of bus bar conductor

    Science.gov (United States)

    López, G.

    Using the one-dimensional, time-independent conduction state, a constant of heat conduction is given bringing about the known stabilization theorem and a closed expression for the bus bar to be cryogenically stable in superconducting accelerators.

  6. Black silicon solar cells with black bus-bar strings

    DEFF Research Database (Denmark)

    Davidsen, Rasmus Schmidt; Tang, Peter Torben; Mizushima, Io;

    2016-01-01

    We present the combination of black silicon texturing and blackened bus-bar strings as a potential method for obtaining all-black solar panels, while using conventional, front-contacted solar cells. Black silicon was realized by maskless reactive ion etching resulting in total, average reflectance...... below 0.5% across a 156x156 mm2 silicon wafer. Four different methods to obtain blackened bus-bar strings were compared with respect to reflectance, and two of these methods (i.e., oxidized copper and etched solder) were used to fabricate functional allblack solar 9-cell panels. The black bus-bars (e.......g., by oxidized copper) have a reflectance below 3% in the entire visible wavelength range. The combination of black silicon cells and blackened bus-bars results in aesthetic, all-black panels based on conventional, front-contacted solar cells without compromising efficiency....

  7. BUS 1000母线保护的应用%Application of BUS 1000 Bus-Bar Protection

    Institute of Scientific and Technical Information of China (English)

    马晓光; 张贵金; 冷雪玉

    2001-01-01

    发电厂的母线是电厂中的一个重要组成元件,当母线上发生故障时,将使连接在故障母线上的所有元件在修复故障母线期间,或转换到另一组母线上运行以前遭到停电。同时还可能破坏系统稳定,造成严重后果。因此,母线保护装置是正确迅速切除母线故障的重要装置,它的拒动或误动将给电力系统带来严重危害。详细介绍了华能丹东发电厂350 MW发电机组采用的BUS 1000型母线保护的原理,并对其正常运行及区内、外故障、断路器失灵保护、母联断路器过流保护等几个方面作了详细分析。%Bus bar is an important component in e lectric power plant.When bus bar fault occurs,all components connected on the fa ulty bus bar will be in outage until power restores by repairing the faulty bus bar or switching them over to another bus bar.Furthermore,it may cause the destr uction of system stability resulting in serious consequence.Bus bar protection d evice is the very device to quickly remove bus bar faults,and its malfunctioning will bring serious harm to power system. The principle of BUS 1000 bus bar prot ection used for 350 MW unit of dandong power plant is introduced.Its normal oper ation and several aspects,such as in-and out-area faults,out-of-order breake r protection,bus bar breaker over-current protection,are analyzed in detail.

  8. Black silicon with black bus-bar strings

    DEFF Research Database (Denmark)

    Davidsen, Rasmus Schmidt; Tang, Peter Torben; Mizushima, Io;

    2016-01-01

    We present the combination of black silicon texturing and blackened bus-bar strings as a potential method for obtaining all-black solar panels, while using conventional, front-contacted solar cells. Black silicon was realized by mask-less reactive ion etching resulting in total, average reflectance...... below 0.5% across a 156x156 mm2 silicon wafer. Black bus-bars were realized by oxidized copper resulting in reflectance below 3% in the entire visible wavelength range. The combination of these two technologies may result in aesthetic, all-black panels based on conventional, front-contacted solar cells...

  9. Bus bar joints stability and protection

    CERN Document Server

    Verweij, A

    2009-01-01

    A defective bus connection between two dipole magnets was the primary cause of the incident in sector 34 on September 19th. I will show how this could have happened, i.e. how a highly resistive joint has caused a thermal runaway and burned (or opened) before the QPS threshold was reached. In the second part of the talk I will present the new detection limits for the QPS upgrade of the RB and RQ circuits, required to avoid similar thermal runaways in the future.

  10. Loss of power of a 220 VAC safety bus bar at Embalse NPP

    International Nuclear Information System (INIS)

    Embalse nuclear power plant is located at the Cordoba Province, 5 kilometres Southern the town of Embalse. It is equipped with one 600 MWe CANDU reactor. At the time of the event, which occurred on 11 October 2004, the plant was operating normally at full power. The Embalse nuclear power plant electrical power system buses are classified, in reliability decreasing order, into the following four different levels: 1) Class I: uninterrupted direct current supplies for safety related and other essential loads; 2) Class II: uninterrupted alternating current supplies for safety related and other essential loads; 3) Class III: alternating current supplies to essential auxiliaries which can tolerate the short interruption required until to start up and load the on-site standby generators and 4) Class IV: normal alternating current supplies to auxiliaries which can tolerate long duration interruptions without affecting personnel or equipment safety (Class IV is the normal source of power to Class III system). In particular, the Class II 220 VAC uninterrupted monophasic safety bus bars are composed by three 220 VAC subsystems powered by the following two sources of power: Class I uninterrupted safety bus bars (5551 BUA, BUB and BUC bars) and Class III secondary distribution 5433-MCC5 and MCC6. The Class II 220 VAC bus bars are normally powered from Class I bus bars through static monophasic inverters. Beside, in a static monophasic out of service case, Class II bus bar affected could be powered from Class III bus bars via a transformer stabilizer. Class II bus bars supplies power to both control computers and the AC instrumentation and control devices. When 220 VAC (Class II) 5542-BUC-monophasic-inverter failure was coincident with a subsequent independent failure to transfer to the Class III through static commuter 5542-SVR-C, a loss of the 220 VAC uninterrupted monophasic safety bus bar (Class II) event was caused. (author)

  11. Calculation of Flexible Bus-Bars Electrodynamic Stability with Application of Implicit Scheme

    OpenAIRE

    Y. G. Panamarenka

    2008-01-01

    A numerical method for calculation of open-air substations’ flexible bus-bars dynamic at short-circuit has been improved on equations of a flexible elastic string with application of an implicit scheme. On the basis of the numerical method a computer program FLEBUS for calculation of substations’ flexible bus-bars dynamic at short-circuit has been developed. An approbation and an estimation of calculation result reliability have been carried out in accordance with the program while using expe...

  12. Mechanical analysis of the main bus bars in the DFBA shuffling modules

    CERN Document Server

    Ramos, D

    2012-01-01

    The main bus bars (13 kA) inside the shuffling modules of the distribution feed boxes powering the LHC arcs (DFBA) are subjected to high Lorentz forces. The structural behaviour of the bus bars under such forces is here analysed. The results are discussed with respect to a risk of structural failure due to excessive deformation or degradation of the electrical insulation by repeated contact with other surfaces.

  13. An analytical algorithm to determine allowable ampacities of horizontally installed rectangular bus bars

    Directory of Open Access Journals (Sweden)

    Klimenta Dardan O.

    2016-01-01

    Full Text Available The main objective of this paper is to propose an algorithm for the determination of the allowable ampacities of single rectangular-section bus bars without the occurrence of correction factors. Without correction factors, the ampacity computation of the copper and aluminium bus bars is fully automatized. The analytical algorithm has been implemented in a computer program code that along with the allowable ampacity can compute the bus bar temperature and the individual heat transfer coefficient for each side of the bus bar, as well as their corresponding power losses. Natural and forced convection correlations for rectangular bus bars are applied. Effects of the solar radiation and radiation heat losses from the bus bar surface are taken into consideration as well. The finite element method (FEM has been used for the linear/non-linear steady-state thermal analysis, i.e. for validation of the analytical algorithm. All FEM-based numerical computations were carried out using the COMSOL Heat Transfer Module. [Projekat Ministarstva nauke Republike Srbije, br. TR33046

  14. Initial magnetic field distribution around high rectangular bus bars

    OpenAIRE

    Cividjian Grigore A.

    2014-01-01

    The one-dimensional transient electromagnetic field in and around a system of two nonmagnetic homogenous rectangular high thin bars can be analytically evaluated if the ratio of average initial magnetic field on the two sides of thin bar, or of the ratio of initial magnetic fields in middle of the bar height is known. In this paper, using appropriate conformal mappings, an exact analytical solution for these ratios are proposed in the case of very thin bars...

  15. Initial magnetic field distribution around high rectangular bus bars

    Directory of Open Access Journals (Sweden)

    Cividjian Grigore A.

    2014-01-01

    Full Text Available The one-dimensional transient electromagnetic field in and around a system of two nonmagnetic homogenous rectangular high thin bars can be analytically evaluated if the ratio of average initial magnetic field on the two sides of thin bar, or of the ratio of initial magnetic fields in middle of the bar height is known. In this paper, using appropriate conformal mappings, an exact analytical solution for these ratios are proposed in the case of very thin bars. Obtained values are compared with FEM results for relatively thick bars.

  16. Calculation of Flexible Bus-Bars Electrodynamic Stability with Application of Implicit Scheme

    Directory of Open Access Journals (Sweden)

    Y. G. Panamarenka

    2008-01-01

    Full Text Available A numerical method for calculation of open-air substations’ flexible bus-bars dynamic at short-circuit has been improved on equations of a flexible elastic string with application of an implicit scheme. On the basis of the numerical method a computer program FLEBUS for calculation of substations’ flexible bus-bars dynamic at short-circuit has been developed. An approbation and an estimation of calculation result reliability have been carried out in accordance with the program while using experimental data. On the basis of the obtained information it is possible to assert that the developed program is an independent tool for calculation of electrodynamic stability of substations’ flexible bus-bars.

  17. Realization and optimization of bus bar current transducers based on Hall effect sensors

    Science.gov (United States)

    Blagojević, Marjan; Jovanović, Uglješa; Jovanović, Igor; Mančić, Dragan; Popović, Radivoje S.

    2016-06-01

    In this paper the realization and optimization of two coreless open-loop bus bar current transducers based on a Hall effect sensor are presented. Two types of bus bar are evaluated: flat rectangular and rectangular with a restrictive region in the middle. Both realized transducers are capable of measuring AC and DC currents up to 300 A and 10 kHz frequency with nonlinearity less than 0.3% in the entire range. Several methods for resolving issues with the skin effect and stray magnetic fields are presented along with the experimental test results. Some of the presented methods are novel and have never been evaluated.

  18. Design and Manufacture of the Superconducting Bus-bars for the LHC Main Magnets

    CERN Document Server

    Belova, L M; Perinet-Marquet, J L; Ivanov, P; Urpin, C

    2002-01-01

    The main magnets of the LHC are series-connected electrically in different powering circuits by means of superconducting bus-bars, carrying a maximum current of 13 kA. These superconducting bus-bars consist of a superconducting cable thermally and electrically coupled to a copper profile all along the length. The function of the copper profile is essentially to provide an alternative path for the current in case the superconducting cable loses its superconducting state and returns to normal state because of a transient disturbance or of a normal zone propagation coming from the neighbouring magnets. When a superconducting bus-bar quenches to normal state its temperature must always stay below a safe values of about 100°C while the copper is conducting. When a resistive transition is detected, the protection systems triggers the ramping down of the current from 13000 A to 0. The ramp rate must not exceed a maximum value to avoid the transition of magnets series-connected in the circuit. This paper concerns th...

  19. Measurement of Parasitic Inductances in the Bus-Bar Assembly of a High Power Voltage Source Converter

    Science.gov (United States)

    Datta, Aniket; Narayanan, G.

    2016-05-01

    Insulated gate bipolar transistor (IGBT) based voltage source converters use copper plates with insulating sheets in between them (sandwich bus-bar arrangement) for connecting the different device terminals in the power circuit. In such converters, the parasitic inductances in the power circuit are crucial as they cause overvoltage spikes across the device. Also, the parasitics affect the current sharing between IGBTs when they are connected in parallel in high power converters. The conduction path through plates and fasteners in the bus-bar assembly is three-dimensional and quite complex, making analytical evaluation of the stray inductance quite challenging. The first objective here is to present a simple experimental setup and experimental procedure, which are convenient for power electronic engineers, to measure the bus-bar inductance. The next objective is to carry out experimental studies on the inductances offered by different components and sub-assemblies in a bus-bar assembly. This includes evaluation of inductances of the different conduction paths in typical bus-bar plates. The third objective is to experimentally evaluate the parasitic inductances in the bus-bar assembly of a commercial 250 kVA high power converter. Each leg of this converter consists of two 300 A/1200 V IGBTs connected in parallel. The effective inductance seen by the individual device modules are determined experimentally.

  20. Thermo-electric Analysis of the Interconnection of the LHC main Superconducting Bus Bars

    CERN Document Server

    Granieri, P P; Casali, M; Bottura, L; Siemko, A

    2013-01-01

    Spurred by the question of the maximum allowable energy for the operation of the Large Hadron Collider (LHC), we have progressed in the understanding of the thermo-electric behavior of the 13 kA superconducting bus bars interconnecting its main magnets. A deep insight of the underlying mechanisms is required to ensure the protection of the accelerator against undesired effects of resistive transitions. This is especially important in case of defective interconnections which can jeopardize the operation of the whole LHC. In this paper we present a numerical model of the interconnections between the main dipole and quadrupole magnets, validated against experimental tests of an interconnection sample with a purposely built-in defect. We consider defective interconnections featuring a lack of bonding among the superconducting cables and the copper stabilizer components, such as those that could be present in the machine. We evaluate the critical defect length limiting the maximum allowable current for powering th...

  1. Effect of extrusion wheel angular velocity on continuous extrusion forming process of copper concave bus bar

    Institute of Scientific and Technical Information of China (English)

    WU Peng-yue; XIE Shui-sheng; LI Hua-qing; YAN Ming; HUANG Guo-jie; CHENG Lei

    2007-01-01

    The continuous extrusion forming process for producing large section copper concave bus bar under different extrusion wheel angular velocities was studied by three-dimensional finite element technology based on software DEFORM-3D. The rigid-viscoplastic constitutive equation was employed in the model. The numerical simulation results show that the deformation body flow velocity in the die orifice increases gradually with the increase of the extrusion wheel angular velocity. But slippage between the rod and extrusion wheel occurs when the extrusion wheel angular velocity is high. The effective stress near the die orifice enhances gradually with increasing extrusion wheel angular velocity. High stress is concentrated in adjacent regions of the flash gap. The effective strain gradient is greater near the abutment than that near the die orifice. The effective strain of the product increases gradually with increasing extrusion wheel angular velocity. In the deformation process, the deformation body temperature increases remarkably due to friction and deformation. So the cooling is necessary in the region of the die and tools.

  2. Thermo-electric analysis of the interconnection of the LHC main superconducting bus bars

    Science.gov (United States)

    Granieri, P. P.; Breschi, M.; Casali, M.; Bottura, L.; Siemko, A.

    2013-01-01

    Spurred by the question of the maximum allowable energy for the operation of the Large Hadron Collider (LHC), we have progressed in the understanding of the thermo-electric behavior of the 13 kA superconducting bus bars interconnecting its main magnets. A deep insight of the underlying mechanisms is required to ensure the protection of the accelerator against undesired effects of resistive transitions. This is especially important in case of defective interconnections which can jeopardize the operation of the whole LHC. In this paper we present a numerical model of the interconnections between the main dipole and quadrupole magnets, validated against experimental tests of an interconnection sample with a purposely built-in defect. We consider defective interconnections featuring a lack of bonding among the superconducting cables and the copper stabilizer components, such as those that could be present in the machine. We evaluate the critical defect length limiting the maximum allowable current for powering the magnets. We determine the dependence of the critical defect length on different parameters as the heat transfer towards the cooling helium bath, the quality of manufacturing, the operating conditions and the protection system parameters, and discuss the relevant mechanisms.

  3. High-Current Bus Splice Resistances and Implications for the Operating Energy of the LHC

    CERN Document Server

    Koratzinos, M; Charifoulline, Z; Dahlerup-Petersen, K; Denz, R; Flora, R H; Pfeffer, H; Scheuerlein, C; Schmidt, R; Siemko, A; Strait, J; Verweij, A

    2010-01-01

    At each interconnection between LHC main magnets a low-resistance solder joint must be made between superconducting cables in order to provide a continuous current path through the superconductor and also to the surrounding copper stabilizer in case the cable quenches [1]. About 10,000 such joints exist in the LHC. An extensive campaign has been undertaken to characterize and map the resistances of these joints. All of the superconducting cable splices were measured at 1.9 K and no splices were found with a resistance larger than 3 nW. Non-invasive measurements of the stabilizer joints were made at 300 K in 5 of the 8 sectors, and at 80 K in 3 sectors. More precise local measurements were made on suspect interconnects that were opened up, and poor joints were repaired. However, it is likely that additional imperfect stabilizer joints still exist in the LHC. A statistical analysis is used to place bounds on the remaining worst-case resistances. This sets limits on the maximum operating energy of the LHC, prior...

  4. Discussion on microprocessor-based bus bar protection%浅谈母差保护微机化的几点感受

    Institute of Scientific and Technical Information of China (English)

    舒逸石; 马勇; 于培杰

    2009-01-01

    通过总结大量变电站母差保护微机化改造中发现的问题,从电流互感器、二次负载、抗饱和能力、保护动作时间、运行方式判别等几个方面,对继电器式和微机式母差保护进行了对比分析,指出工程人员往往只重视保护的更换,而忽略了电流互感器的更换,导致因电流互感器与保护不匹配而产生母差保护误动作,同时阐明了微机式母差保护的优点.%Through a large number of problems about rebuilding transformer substation microprocessor bus bar protection, this paper analyzes several aspects of relayed bus bar protection and microprocessor-based bus bar protection from current transformers, the secondary load, the anti-saturation ability, the action time and operating mode. Then it points out that engineers often pay more attention on the replacement of protection, neglects the replacement of current transformers, which leads to the mistaken action of bus bar protection because current transformer is mismatched with protection. At the same time, it illustrates the advantages of microprocessor-based bus bar protection.

  5. Current lead and bus bar system for the 1.8 K test of the EURATOM LCT-coil

    International Nuclear Information System (INIS)

    For the test of EURATOM LCT coil at 1.8 K in the TOSKA facility, it is foreseen to use the 23 kA current leds developed for the POLO model coil. Special emphasis has been given to the connection of the current leads which will operate by using supercritical helium at 4.2 K to the coil terminals which are on the 1.8 K level. The heat input from the bus bar system (4.2 K) to the coil winding cooling circiut (1.8 K) for each terminal is only in the range of 10 to 15 W. The calculations show that the current leads together with the superconducting connection bars are safe: They can withstand a loss of mass flow for more than one minute withonly a very small increase of heat load into the coil if its cooling circuit stays in operation. (orig.)

  6. Measurement of the Residual Resistivity Ratio of the Bus Bars Copper Stabilizer of the 13 kA Circuits of the LHC

    CERN Document Server

    Apollonio, A; Solfaroli Camillocci, M; Schmidt, R; Verweij, A; Siemko, A; Claudet, S; Steckert, J; Thiesen, H

    2012-01-01

    After the incident of September 2008, the operational beam energy of the LHC has been set to 3.5 TeV, since not all joints of the superconducting (SC) bus bars between magnets have the required quality for 7 TeV operation. This decision is based on simulations to determine the safe current in the main dipole and quadrupole circuits, reproducing the thermal behaviour of a quenched superconducting joint by taking into account all relevant factors that affect a possible thermal runaway. One important parameter is the Residual Resistivity Ratio (RRR) of the copper stabilizer of the bus bar connecting the superconducting magnets. A dedicated campaign to measure the RRR for the main 13 kA circuits of the LHC in all sectors was performed during the Christmas stop in December 2010 and January 2011. The measurement method as well as the data analysis and results are presented in this paper.

  7. Proposal for the award of a blanket contract for the supply and installation of water-cooled bus bars and cables for the LHC

    CERN Document Server

    2003-01-01

    This document concerns the award of a blanket contract for the supply and installation of water-cooled bus bars and cables for the LHC project. Following a market survey carried out among 22 firms in six Member States, a call for tenders (IT-2941/ST/LHC) was sent on 30 June 2003 to three firms in two Member States. By the closing date, CERN had received tenders from the three firms. The Finance Committee is invited to agree to the negotiation of a blanket contract with FLOHE (DE), the lowest bidder, for the supply and installation of water-cooled bus bars and cables, for a total amount not exceeding 2 900 000 Swiss francs, subject to revision after 1 January 2005 according to the LME copper prices. The firm has indicated the following distribution by country of the contract value covered by this adjudication proposal: DE - 100%.

  8. Copper Heat Exchanger for the External Auxiliary Bus-Bars Routing Line in the LHC Insertion Regions

    CERN Document Server

    Garion, C; Seyvet, F; Sitko, M; Skoczen, B; Tock, J P

    2006-01-01

    The corrector magnets and the main quadrupoles of the LHC dispersion suppressors are powered by a special superconducting line (called auxiliary bus-bars line N), external to the cold mass and housed in a 50 mm diameter stainless steel tube fixed to the cold mass. As the line is periodically connected to the cold mass, the same gaseous and liquid helium cools both the magnets and the line. The final sub-cooling process (from around 4.5 K down to 1.9 K) consists in the phase transformation from liquid to superfluid helium. Heat is extracted from the line through the magnets via their point of junction. In dispersion suppressor zones, approximately 40 m long, the sub-cooling of the line is slightly delayed with respect to the magnets. This might have an impact on the readiness of the accelerator for operation. In order to accelerate the process, a special heat exchanger has been designed. It is located in the middle of the dispersion suppressor portion of the line. Its main function consists in providing a loca...

  9. Design and analysis of bus-bar of marine main switchboard%船舶主配电板主汇流排设计与分析

    Institute of Scientific and Technical Information of China (English)

    冒如权; 郭建; 方雄伟

    2014-01-01

    The most important part of marine power distribution system is main switchboard, and its key part is main bus-bar, which affects safety and reliability of the power distribution system. This paper describes the design method of the main bus-bar of marine main switchboard, mainly including its selection and veriifcation and analysis of its thermal and dynamic stability combined with calculation of short circuit current. It also proposes the relevant veriifcation calculation equations and introduces the practical application of a case of design of main switchboard with three rectangular copper bus-bar installed in parallel.%主配电板为船舶电力配电系统的重要组成部分,主汇流排作为主配电板的核心部分,关系到电力配电系统的安全可靠运行。文中阐述了船舶主配电板主汇流排的设计方法,主要包括船舶主配电板主汇流排规格选择,以及结合短路电流计算对汇流排进行的热稳定和动稳定校验分析,并给出相关校核计算公式;最后通过三根矩形铜排并联使用的主配电板设计实例介绍计算方法的具体应用。

  10. Stabilizer bar design about the rear suspension of a light bus%某轻型客车后悬架稳定杆设计

    Institute of Scientific and Technical Information of China (English)

    戴声良; 唐学东; 王长文; 李磊; 刘辉

    2009-01-01

    A stabilizer bar was designed based on one light bus single tilted arm rear suspension. Motion harmony and validity in suspension system are analyzed according to geometry relationship. The experiment results show that steering stability of the full vehicle is improved by the stabilizer bar, and the rolling angle stiffness between front and rear suspension matches more reasonably.%对某轻型客车单斜臂式后悬架布置横向稳定杆,根据几何关系分析了横向稳定杆在悬架系统中运动协调性和有效性;试验结果表明,设计的稳定杆能有效改善整车的操纵稳定性,前后悬架的侧倾角刚度匹配也更趋合理.

  11. 铜排连续挤压力能的工程法计算%Calculation of Pressure and Power Required by Continuous Extrusion of Copper Bus Bar by Slab Method

    Institute of Scientific and Technical Information of China (English)

    于孟; 代娜娜; 钟毅

    2012-01-01

    The pressure and power required by continuous extrusion of copper bus bar was calculated and the analytical expression of the inlet stress of the extending mould was obtained herein. The analytical expression shows the rules of the pressure changing with the variation of thickness and flakiness ratio of products. Taking the torque caused by flash of metal and plug into account, the power required by continuous extrusion of copper bus bar with a specification of 204. 5mm × 7. 5mm was calculated by employing the proposed method, and the results show good agreement with the experimental values. The error of calculation is 12%, and is able to meet the engineering application. Therefore, the proposed method can provide reference for the design of extrusion mould and rational selection of copper bus bar continuous extrusion machine.%采用工程法对连续挤压铜排的力能进行了计算,得到了连续挤压铜排模腔入口挤压应力的解析表达式及挤压应力随产品厚度和宽厚比变化的规律.考虑到溢料和堵头对挤压轮产生的扭矩,对204.5mm×7.5mm铜排连续挤压的功率进行了计算,并将其与实验中的实测值进行比较,二者误差为12%,能满足工程计算的需要.因此,该方法可为模具设计和合理选择铜排连续挤压设备提供参考.

  12. BUS 650 UOP Material - bus650dotcom

    OpenAIRE

    lucky108

    2015-01-01

    For more course tutorials visit www.bus650.com BUS 650 Week 1 DQ 1 The Role of Financial Management in a Firm BUS 650 Week 1 DQ 2 Short Term or Long Term View BUS 650 Week 1 Financial Management Challenges BUS 650 Week 2 DQ 1 Initial Investment BUS 650 Week 2 DQ 2 Managing Earnings BUS 650 Week 2 Return on Investment Education Funding BUS 650 Week 3 DQ 1 GAAP vs. IFRS BUS 650 Week 3 DQ 2 Capital Rationing BUS 650 Week 3 Journal Capital Budgeting BUS 650 Week 3 Management of Working Capital Ca...

  13. A close-up of the lower part of a 13 kA current lead. The high-temperature superconductor (on the left in the photo) with the low-temperature superconductor (on the right). Resting in liquid helium, the low-temperature superconductor is connected to the bus-bars conveying the current to the LHC magnets.

    CERN Multimedia

    2004-01-01

    A close-up of the lower part of a 13 kA current lead. The high-temperature superconductor (on the left in the photo) with the low-temperature superconductor (on the right). Resting in liquid helium, the low-temperature superconductor is connected to the bus-bars conveying the current to the LHC magnets.

  14. BUS 372 ASH Material - bus372dotcom

    OpenAIRE

    lucky108

    2015-01-01

    For more course tutorials visit www.bus372.com       BUS 372 Week 1 DQ 1 The Role of Unionization (Ash Course) BUS 372 Week 1 DQ 2 Meeting Member Needs (Ash Course) BUS 372 Week 2 DQ 1 Profit Interest and Employee Interest (Ash Course) BUS 372 Week 2 DQ 2 Union Requirements (Ash Course) BUS 372 Week 2 Assignment Changing Landscape of Unions (Ash Course) BUS 372 Week 2 Quiz (Ash Course) BUS 372 Week 3 DQ 1 Strikes (Ash Course) BUS ...

  15. BUS 372 Tutorials / bus372dotcom

    OpenAIRE

    sunshine3811

    2015-01-01

    For more course tutorials visit www.bus372.com       BUS 372 Week 1 DQ 1 The Role of Unionization (Ash Course) BUS 372 Week 1 DQ 2 Meeting Member Needs (Ash Course) BUS 372 Week 2 DQ 1 Profit Interest and Employee Interest (Ash Course) BUS 372 Week 2 DQ 2 Union Requirements (Ash Course) BUS 372 Week 2 Assignment Changing Landscape of Unions (Ash Course) BUS 372 Week 2 Quiz (Ash Course) BUS 372 Week 3 DQ 1 Strikes (Ash Course) BUS ...

  16. BUS 401 Courses / bus401tutorialdotcom

    OpenAIRE

    uophelp

    2015-01-01

     FOR MORE CLASSES VISIT www.bus401tutorial.com BUS 401 Week 1 DQ 1 Corporate Income Tax and Real Interest Rates (Ash Course) BUS 401 Week 1 DQ 2 Cash Flow and Ratio Analysis (Ash Course)  BUS 401 Week 1 Assignment Ratio Analysis (Ash Course) BUS 401 Week 1 Quiz (Ash Course) BUS 401 Week 2 DQ 1 Annuity and Capital Asset Pricing (Ash Course) BUS 401 Week 2 DQ 2 Bonds and Common Stock (Ash Course) BUS 401 Week 2 Assignment Alternative Investments (Ash Co...

  17. BUS 401 COURSES / bus401tutordotcom

    OpenAIRE

    uophelp

    2015-01-01

    FOR MORE CLASSES VISIT www.bus401tutor.com   BUS 401 Week 1 DQ 1 Corporate Income Tax and Real Interest Rates (Ash Course) BUS 401 Week 1 DQ 2 Cash Flow and Ratio Analysis (Ash Course)  BUS 401 Week 1 Assignment Ratio Analysis (Ash Course) BUS 401 Week 1 Quiz (Ash Course) BUS 401 Week 2 DQ 1 Annuity and Capital Asset Pricing (Ash Course) BUS 401 Week 2 DQ 2 Bonds and Common Stock (Ash Course) BUS 401 Week 2 Assignment Alternative Investments (Ash ...

  18. BUS 660 ASH Course Tutorial / bus660dotcom

    OpenAIRE

    vasanthi moola

    2015-01-01

    BUS 660 Entire Course For more course tutorials visit www.bus660.com   BUS 660 Week 1 Assignment Developing Leaders at UPS BUS 660 Week 2 Assignment Leadership Style BUS 660 Week 3 Assignment Leadership Traits BUS 660 Week 4 Assignment Leadership Skills BUS 660 Week 5 Assignment Big Changes for a Small Hospital BUS 660 Week 6 Assignment Research Paper BUS 660 Week 1 DQ 1 Leadership Defined BUS 660 Week 1 DQ 2 Education and Experience BUS 66...

  19. ELECTRO-THERMAL AND MECHANICAL VALIDATION EXPERIMENT ON THE LHC MAIN BUSBAR SPLICE CONSOLIDATION

    CERN Document Server

    Willering, GP; Bourcey, N; Bottura, L; Charrondiere, M; Cerqueira Bastos, M; Deferne, G; Dib, G; Giloux, Chr; Grand-Clement, L; Heck, S; Hudson, G; Kudryavtsev, D; Perret, P; Pozzobon, M; Prin, H; Scheuerlein, Chr; Rijllart, A; Triquet, S; Verweij, AP

    2012-01-01

    To eliminate the risk of thermal runaways in LHC interconnections a consolidation by placing shunts on the main bus bar interconnections is proposed by the Task Force Splices Consolidation. To validate the design two special SSS magnet spares are placed on a test bench in SM-18 to measure the interconnection in between with conditions as close as possible to the LHC conditions. Two dipole interconnections are instrumented and prepared with worst-case-conditions to study the thermo-electric stability limits. Two quadrupole interconnections are instrumented and prepared for studying the effect of current cycling on the mechanical stability of the consolidation design. All 4 shunted interconnections showed very stable behaviour, well beyond the LHC design current cycle.

  20. BUS 210 Course tutorial/ indigohelp

    OpenAIRE

    WVFD

    2015-01-01

    For more classes visit www.indigohelp.com   BUS 210 Week 1 DQ1 and DQ2 BUS 210 Week 1 Checkpoint Business Models and Systems (2 Sets) BUS 210 Week 1 Knowledge Check BUS 210 Week 2 CheckPoint Business Organization  (2 Sets) BUS 210 Week 2 Knowledge Check BUS 210 Week 2 Assignment Evolution of Business Presentation (2 Sets) BUS 210 Week 3 DQ 1 and DQ 2 BUS 210 Week 3 CheckPoint Code of Ethics (2 Sets) BUS 210 Week 3 Knowledge Check BUS 2...

  1. PCI bus demystified

    CERN Document Server

    Abbott, Doug

    2004-01-01

    The peripheral component interconnect (PCI) bus is the dominant bus system used to connect the different elements making up today''s high-performance computer systems. Different PCI implementations have also been developed for such applications as telecommunications and embedded computing. If an application calls for high speed, high reliability, flexible configuration, and bus mastering, then PCI is the only logical bus choice. This book is an applications-oriented introduction to the PCI bus, with an emphasis on implementing PCI in a variety of computer architectures. Special attention is given to industrial and mission-critical applications of PCI bus.·Fully describes PCI electrical specifications, mechanical requirements, and signal types·Covers advanced topics through numerous design examples to increase the readers understanding of the subject ·Includes updated coverage of PCI-X 2.0

  2. Intelligent Bus Stops in the Flexible Bus Systems

    Directory of Open Access Journals (Sweden)

    Razi Iqbal

    2014-09-01

    Full Text Available The purpose of this paper is to discuss Intelligent Bus Stops in a special Demand Responsive Transit (DRT, the Flexible Bus System. These Intelligent Bus Stops are more efficient and information rich than Traditional Bus Stops. The real time synchronization of the Flexible Bus System makes it unique as compared to Traditional Bus Systems. The Main concern is to make Bus Stops intelligent and information rich. Buses are informed about the no. of passengers waiting at the upcoming Bus Stops. If there are no passengers to ride or get off on upcoming Bus Stop, the Bus can skip that Bus Stop and head towards the next Bus Stop where passenger is waiting, which will decrease the ride time of the passengers on the Bus and also the wait time of the passengers waiting on the upcoming Bus Stops. Providing more information at Bus Stops about the Destination (Time to Destination, Distance to Destination etc. and Buses (Bus Location, Arrival Time of Bus etc. makes it easier for the passengers to decide whether to ride a particular Bus or not.

  3. Splicing Programs and Cancer

    OpenAIRE

    Sophie Germann; Lise Gratadou; Martin Dutertre; Didier Auboeuf

    2012-01-01

    Numerous studies report splicing alterations in a multitude of cancers by using gene-by-gene analysis. However, understanding of the role of alternative splicing in cancer is now reaching a new level, thanks to the use of novel technologies allowing the analysis of splicing at a large-scale level. Genome-wide analyses of alternative splicing...

  4. TPG bus passes

    CERN Multimedia

    Staff Association

    2013-01-01

    The CERN Staff Association will stop selling TPG bus passes. All active and retired members of the CERN personnel will be able to purchase Unireso bus passes from the CERN Hostel - Building 39 (Meyrin site) from 1st February 2013. For more information: https://cds.cern.ch/journal/CERNBulletin/2013/04/Announcements/1505279?ln=en

  5. The erigone bus study

    International Nuclear Information System (INIS)

    A study has been made of some factors determining the performance and cost-effectiveness of microcomputer bus systems implemented in Europa crates. An experimental system has been specified and a number of modules constructed in accordance with the specification, in order to test the validity of some of the ideas proposed. It has been demonstrated that the bus interfacing logic can be simple and inexpensive, while maintaining a high degree of processor independence and also a high degree of transparency in operation. The number of pins required by the bus is minimized by multiplexing address and data. A series termination for the drive of the multiplexed lines permits cross-talk to be reduced to insignificant levels: this technique is recommended for wider application. The experimental bus is proposed as a basis for the construction of simple microcomputer-based instrumentation systems. (orig.)

  6. Bus.py

    Energy Technology Data Exchange (ETDEWEB)

    2014-07-21

    GridLAB-D is an agent? based distribution system simulation environment that allows fine-grained end-user models, including geospatial and network topology detail. GridLAB-D addresses the lack of runtime interaction by designing a flexible communication interface, Bus.py (pronounced bus-dot-pie), that uses Python to pass messages between one or more GridLAB-D instances and a Smart Grid simulator.

  7. Savannah River bus project

    Energy Technology Data Exchange (ETDEWEB)

    Summers, W.A. [Westinghouse Savannah River Co., Aiken, SC (United States)

    1998-08-01

    The H2Fuel Bus is the world`s first hybrid hydrogen electric transit bus. It was developed through a public/private partnership involving several leading technology and industrial organizations in the Southeast, with primary funding and program management provided by the Department of Energy. The primary goals of the project are to gain valuable information on the technical readiness and economic viability of hydrogen buses and to enhance the public awareness and acceptance of emerging hydrogen technologies. The bus has been operated by the transit agency in Augusta, Georgia since April, 1997. It employs a hybrid IC engine/battery/electric drive system, with onboard hydrogen fuel storage based on the use of metal hydrides. Initial operating results have demonstrated an overall energy efficiency (miles per Btu) of twice that of a similar diesel-fueled bus and an operating range twice that of an all-battery powered electric bus. Tailpipe emissions are negligible, with NOx less than 0.2 ppm. Permitting, liability and insurance issues were addressed on the basis of extensive risk assessment and safety analyses, with the inherent safety characteristic of metal hydride storage playing a major role in minimizing these concerns. Future plans for the bus include continued transit operation and use as a national testbed, with potential modifications to demonstrate other hydrogen technologies, including fuel cells.

  8. LHC on the bus

    CERN Document Server

    Laëtitia Pedroso

    2010-01-01

    On 15 December, an airport bus will be transformed in the image of CERN. The bus will be seen by the thousands of travellers arriving in Geneva, informing them of the possibility to visit CERN.   Sketch of the bus. The good relationship between Geneva International Airport and CERN started several years ago. In 2004 the airport put advertising space in the arrivals area at CERN's disposal free of charge. Now, starting on 15 December, a 40-foot long bus will display a giant sticker advertisement depicting CERN as it takes passengers over the airport tarmac to their planes. This is no ordinary sticker, and it was no mean task to attach it to the bus. The task of producing and attaching it was entrusted to Geneva-based specialists Mathys SA. With the ski season opening on 15 December, there will be many travellers arriving at the airport, and the bus will be ready to receive them. When one thinks of CERN, the subjects that naturally come to mind are the LHC, the mysteries of the Universe...

  9. BUS 660 Ash course tutorial / uophelp

    OpenAIRE

    uophelp

    2015-01-01

      www.uophelp.com         BUS 660 Week 1 Assignment Developing Leaders at UPS BUS 660 Week 2 Assignment Leadership Style BUS 660 Week 3 Assignment Leadership Traits BUS 660 Week 4 Assignment Leadership Skills BUS 660 Week 5 Assignment Big Changes for a Small Hospital BUS 660 Week 6 Assignment Research Paper BUS 660 Week 1 DQ 1 Leadership Defined BUS 660 Week 1 DQ 2 Education and Experience BUS 660 Week 2 DQ 1 Lea...

  10. BusTechn

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Introduced the characteristics of series communicat io n I 2C bus and basic communication protocol, and introduced the application of the bus I 2C according to the image sensor OV7610.The computer correspondence s tyle can be divided the parallel correspondence and the series correspondence. T he rate of series correspondence is rapid, and the property of real time is exce llent. Because the number of ports which it takes is great, it is not proper to miniaturize. Whereas the rate of series corresponden...

  11. Learning NServiceBus

    CERN Document Server

    Boike, David

    2013-01-01

    This is a practical tutorial containing hands-on examples for creating a messaging and SOA based service bus.This book is for .NET developers who are looking for ways to overcome problems related to buggy third party web service integrations, codebases that have grown into a big ball of mud, and batch jobs failure.

  12. BEIJING BARS

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Cappuccino Bar Cappuccino Bar, at the intersection of Dongzhimenwai Dajie and Sanlitun Beijie, Beijing's most vibrant nightlife area, is a hot new destination for European food lovers. With its perfect combination of both energy and tranquility, and surrounded by diplomatic compounds, it is conveniently located near other Beijing destinations including Lady Street

  13. Complex Alternative Splicing

    OpenAIRE

    Park, Jung Woo; Graveley, Brenton R.

    2007-01-01

    Alternative splicing is a powerful means of controlling gene expression and increasing protein diversity. Most genes express a limited number of mRNA isoforms, but there are several examples of genes that use alternative splicing to generate hundreds, thousands, and even tens of thousands of isoforms. Collectively such genes are considered to undergo complex alternative splicing. The best example is the Drosophila Down syndrome cell adhesion molecule (Dscam) gene, which can generate 38,016 is...

  14. Where splicing joins chromatin

    OpenAIRE

    Hnilicová, Jarmila; Staněk, David

    2011-01-01

    There are numerous data suggesting that two key steps in gene expression—transcription and splicing influence each other closely. For a long time it was known that chromatin modifications regulate transcription, but only recently it was shown that chromatin and histone modifications play a significant role in pre-mRNA splicing. Here we summarize interactions between splicing machinery and chromatin and discuss their potential functional significance. We focus mainly on histone acetylation and...

  15. BUS 401 Ash course tutorial / uophelp

    OpenAIRE

    uophelp

    2015-01-01

    For more course tutorials visit www.uophelp.com   BUS 401 Week 1 DQ 1 Corporate Income Tax and Real Interest Rates BUS 401 Week 1 DQ 2 Cash Flow and Ratio Analysis BUS 401 Week 1 Assignment Ratio Analysis BUS 401 Week 1 Quiz BUS 401 Week 2 DQ 1 Annuity and Capital Asset Pricing BUS 401 Week 2 DQ 2 Bonds and Common Stock BUS 401 Week 2 Assignment Alternative Investments BUS 401 Week 2 Quiz BUS 401 Week 3 DQ 1 NPV, PI, and IRR BUS 401 Week 3 ...

  16. Numerical study of a 50 kA superconducting bus for the NET/ITER model coil test in TOSKA-upgrade

    International Nuclear Information System (INIS)

    Based on the design of the supreconducting bus bar system for the 1.8 K test of the EURATOM LCT coil in the TOSKA Upgrade facility, a superconducting bus bar was designed for the NET/ITER model coil test for an operating current of 50 kA made out of a NbTi cable-in-conduit-conductor imbedded in a copper profile for electrical and mechanical stabilization. For safety reasons, the mass flow through the bus bar is designed as a separate circuit, i.e. the mass flow rates of the coil pancakes, the bus bar, and the current lead are independently adjustable. This results in a bus bar which is safe in case of loss of cooling. But the eddy current losses generated in the stabilizing cooper during the fast discharge of the model coils are by far too high, i.e. the bus bar will quench during high magnetic field changes. Therefore, alternatives are discussed in which the design principles of the bus bar were not changed but it was tried to reduce the eddy current losses in the copper stabilizer. The only possible alternative as a superconducting bus bar consisting of a cable-in-conduit(-CIC)-conductor without any stabilizing copper profile around it. The CIC is imbedded in a jacket made of stainless steel for mechanical stability. The calculations show that this type of bus bar has a high safety margin with respect to AC-losses. In this report, the different designs are described, and the computational results are presented. (orig./GSCH)

  17. Introduction to cotranscriptional RNA splicing.

    Science.gov (United States)

    Merkhofer, Evan C; Hu, Peter; Johnson, Tracy L

    2014-01-01

    The discovery that many intron-containing genes can be cotranscriptionally spliced has led to an increased understanding of how splicing and transcription are intricately intertwined. Cotranscriptional splicing has been demonstrated in a number of different organisms and has been shown to play roles in coordinating both constitutive and alternative splicing. The nature of cotranscriptional splicing suggests that changes in transcription can dramatically affect splicing, and new evidence suggests that splicing can, in turn, influence transcription. In this chapter, we discuss the mechanisms and consequences of cotranscriptional splicing and introduce some of the tools used to measure this process.

  18. BUS 437 UOP Course Tutorial/ Tutorialrank

    OpenAIRE

    john

    2015-01-01

    For more course tutorials visit www.tutorialrank.com Tutorial Purchased: 4 Times, Rating: A+   ASHFORD BUS 437 Week 1 Assignment Company Description ASHFORD BUS 437 Week 1 DQ 1 Writing the Business Plan ASHFORD BUS 437 Week 1 DQ 2 Using Outside Help to Write the Plan ASHFORD BUS 437 Week 2 Assignment Marketing Section ASHFORD BUS 437 Week 2 DQ 1 Customer Survey ASHFORD BUS 437 Week 2 DQ 2 Industry Analysis ASHFORD BUS 437 Week 3 Assignment Strategy...

  19. spliceR

    DEFF Research Database (Denmark)

    Vitting-Seerup, Kristoffer; Porse, Bo Torben; Sandelin, Albin;

    2014-01-01

    RNA-seq data is currently underutilized, in part because it is difficult to predict the functional impact of alternate transcription events. Recent software improvements in full-length transcript deconvolution prompted us to develop spliceR, an R package for classification of alternative splicing...

  20. BUS 402 Ash course tutorial / uophelp

    OpenAIRE

    uophelp-

    2015-01-01

    For more course tutorials visit www.uophelp.com     BUS 402 Week 1 DQ 1 Environmental Changes BUS 402 Week 1 DQ 2 Vision and Mission BUS 402 Week 2 DQ 1 Components of External Environment  BUS 402 Week 2 DQ 2 Components of Internal Analysis BUS 402 Week 2 Assignment Starbucks S.W.O.T. Analysis BUS 402 Week 3 DQ 1 Market Positioning Strategies BUS 402 Week 3 DQ 2 Vertical Integration BUS 402 Week 4 DQ 1 International Markets BUS 40...

  1. BUS 642 Ash course tutorial / uophelp

    OpenAIRE

    uophelp

    2015-01-01

    www.uophelp.com     BUS 642 Week 1 DQ 1 Scientific Thinking (Ash Course) BUS 642 Week 1 DQ 2 Making Research Decisions (Ash Course) BUS 642 Week 1 Exercises (Ash Course) BUS 642 Week 2 DQ 1 Ethics in Business Research (Ash Course) BUS 642 Week 2 DQ 2 Design of Research (Ash Course) BUS 642 Week 2 Exercises (Ash Course) BUS 642 Week 3 DQ 1 Measurement Scales (Ash Course) BUS 642 Week 3 DQ 2 Clarifying the Research Questions (Ash Course) BUS...

  2. BUS 437 Ash course tutorial / uophelp

    OpenAIRE

    uophelp

    2015-01-01

    For more course tutorials visit www.uophelp.com   BUS 437 Week 1 Assignment Company Description BUS 437 Week 1 DQ 1 Writing the Business Plan BUS 437 Week 1 DQ 2 Using Outside Help to Write the Plan BUS 437 Week 2 Assignment Marketing Section BUS 437 Week 2 DQ 1 Customer Survey BUS 437 Week 2 DQ 2 Industry Analysis BUS 437 Week 3 Assignment Strategy, Implementation, & Management Sections BUS 437 Week 3 DQ 1 Implementation BUS 437 Week 3 DQ ...

  3. SpliceDisease database: linking RNA splicing and disease

    OpenAIRE

    WANG, Juan; Jie ZHANG; Li, Kaibo; Zhao, Wei; Cui, Qinghua

    2011-01-01

    RNA splicing is an important aspect of gene regulation in many organisms. Splicing of RNA is regulated by complicated mechanisms involving numerous RNA-binding proteins and the intricate network of interactions among them. Mutations in cis-acting splicing elements or its regulatory proteins have been shown to be involved in human diseases. Defects in pre-mRNA splicing process have emerged as a common disease-causing mechanism. Therefore, a database integrating RNA splicing and disease associa...

  4. Splicing regulators: targets and drugs

    OpenAIRE

    Yeo, Gene Wei-Ming

    2005-01-01

    Silencing of splicing regulators by RNA interference, combined with splicing-specific microarrays, has revealed a complex network of distinct alternative splicing events in Drosophila, while a high-throughput screen of more than 6,000 compounds has identified drugs that interfere specifically and directly with one class of splicing regulators in human cells.

  5. 77 FR 48592 - Bus and Bus Facilities Discretionary Program Funds

    Science.gov (United States)

    2012-08-14

    ... authorized by 49 U.S.C. 5309(b), as amended by Section 3011 of the Safe, Affordable, Flexible, Efficient... Livability Initiatives (77 FR 6178). The NOFA explained the requirements and procedures for eligible... facilities, bus-related equipment, and transit asset management systems. The FY 2012 Bus...

  6. Performance of Grouted Splice Sleeve Connector under Tensile Load

    Directory of Open Access Journals (Sweden)

    A. Alias

    2016-05-01

    Full Text Available The grouted splice sleeve connector system takes advantage of the bond-slip resistance of the grout and the mechanical gripping of reinforcement bars to provide resistance to tensile force. In this system, grout acts as a load-transferring medium and bonding material between the bars and sleeve. This study adopted the end-to-end rebars connection method to investigate the effect of development length and sleeve diameter on the bonding performance of the sleeve connector. The end-to-end method refers to the condition where reinforcement bars are inserted into the sleeve from both ends and meet at the centre before grout is filled. Eight specimens of grouted splice sleeve connector were tested under tensile load to determine their performance. The sleeve connector was designed using 5 mm thick circular hollow section (CHS steel pipe and consisted of one external and two internal sleeves. The tensile test results show that connectors with a smaller external and internal sleeve diameter appear to provide better bonding performance. Three types of failure were observed in this research, which are bar fracture (outside the sleeve, bar pullout, and internal sleeve pullout. With reference to these failure types, the development length of 200 mm is the optimum value due to its bar fracture type, which indicates that the tensile capacity of the connector is higher than the reinforcement bar. It is found that the performance of the grouted splice sleeve connector is influenced by the development length of the reinforcement bar and the diameter of the sleeve.

  7. BUS 611 Ash course tutorial / uophelp

    OpenAIRE

    uophelp

    2015-01-01

    For more course tutorials visit www.uophelp.com   BUS 611 Week 1 Assignment Article Review (Ash Course) BUS 611 Week 2 Assignment Project Risk (Ash Course) BUS 611 Week 3 Assignment WBS (Ash Course) BUS 611 Week 4 Assignment Integrated Project Management Tools (Ash Course) BUS 611 Week 5 Assignment Monthly Status Reports (Ash Course) BUS 611 Week 6 Final Research Paper (Ash Course)  

  8. Optical Fiber Fusion Splicing

    CERN Document Server

    Yablon, Andrew D

    2005-01-01

    This book is an up-to-date treatment of optical fiber fusion splicing incorporating all the recent innovations in the field. It provides a toolbox of general strategies and specific techniques that the reader can apply when optimizing fusion splices between novel fibers. It specifically addresses considerations important for fusion splicing of contemporary specialty fibers including dispersion compensating fiber, erbium-doped gain fiber, polarization maintaining fiber, and microstructured fiber. Finally, it discusses the future of optical fiber fusion splicing including silica and non-silica based optical fibers as well as the trend toward increasing automation. Whilst serving as a self-contained reference work, abundant citations from the technical literature will enable readers to readily locate primary sources.

  9. 高效钢筋挤压连接设备的研究和设计%Research And Design of High Efficiency Squeeze Splicing Machine for the Reinforcing Bars

    Institute of Scientific and Technical Information of China (English)

    钱冠龙

    2001-01-01

    It puts forward the method to increase manufacture efficiency about the squeeze machine for reinforcing bars, and gives the detail on the design idea and technical measures by the large flux and great power. The paper solves the problems such as fever, bad pressurize, parts short life, excessive failure and so on, that happened with flux and part's dimension of 80MPa super high pressure hydraulic system. The machine is being used in many construction projects both at home and abroad.%从提高钢筋挤压连接设备工作效率的几条途径(即提高泵站输出流量、加大挤压钳输出力、实现设备自动控制等)入手,围绕80MPa超高压液压系统提高流量、加大元件尺寸后引出的系统发热、密封效果差、元件寿命低、故障率高等技术难题,阐述了在解决这些难题时大流量、大吨位高效钢筋挤压连接设备其结构、材料、加工技术等方面的设计思想和技术措施。该设备产品已在国内外数百个大中型工程建设项目中得到应用,效果良好。

  10. BUS 620 Ash course tutorial / uophelp

    OpenAIRE

    uophelp

    2015-01-01

    For more course tutorials visit www.uophelp.com   BUS 620 Week 1 DQ 1 What is Marketing (Ash Course) BUS 620 Week 1 DQ 2 Marketing Strategies (Ash Course) BUS 620 Week 1 The Future of the New York Times (Ash Course) BUS 620 Week 2 DQ 1 Buyer Behavior (Ash Course) BUS 620 Week 2 DQ 2 Customer Needs (Ash Course) BUS 620 Week 2 Industry Forecasting (Ash Course) BUS 620 Week 3 DQ 1 Braining Nordstrom (Ash Course) BUS 620 Week 3 DQ 2 Marketing Segmentat...

  11. Learning NServiceBus Sagas

    CERN Document Server

    Helton, Rich

    2015-01-01

    If you are an Enterprise C# developer who wishes to extend your knowledge of NServiceBus and Enterprise Service Bus in C#, this is the book for you. This book is designed to enhance the education of ESBs and their messaging, whether you are a beginner or a seasoned expert in Enterprise C#, Apex, and Visualforce pages.

  12. Standard satellite data bus initiative

    Science.gov (United States)

    Spinney, Timothy; Yousef, Hassan

    The USAF Space Technology Center manages programs to reduce satellite costs through the appropriate use of microelectronics standardization. Ongoing programs such as the Standard Spacecraft Memory Module and Generic VHSIC Spaceborne Computer have provided an insight into the value of standardization and led to an initiative to coordinate microelectronics development around a standard satellite data bus, which should reduce costs by eliminating program- and contractor-unique interfaces, increasing production runs, and developing generic test equipment. Current efforts focus on the satellite housekeeping functions, and it is expected that the mission payload would also use this data bus. Based on existing housekeeping data-traffic requirements, several candidates have been identified for the standard data bus. The two candidates selected for further work are the ANSI X3T9.5 data bus and the linear token-passing data bus being proposed as part of the Advanced Tactical Fighter effort.

  13. The Myth of the "Ideal Bus"

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    @@ Does as an ideal bus technology exist? Many companies have and will promote a single technology as the ideal bus that will meet all application needs, but in actuality, each bus technology has its own strengths and weaknesses and thus is appropriate for different applications. History has shown the folly of claiming an ideal bus for every application.

  14. High-Speed Ring Bus

    Science.gov (United States)

    Wysocky, Terry; Kopf, Edward, Jr.; Katanyoutananti, Sunant; Steiner, Carl; Balian, Harry

    2010-01-01

    The high-speed ring bus at the Jet Propulsion Laboratory (JPL) allows for future growth trends in spacecraft seen with future scientific missions. This innovation constitutes an enhancement of the 1393 bus as documented in the Institute of Electrical and Electronics Engineers (IEEE) 1393-1999 standard for a spaceborne fiber-optic data bus. It allows for high-bandwidth and time synchronization of all nodes on the ring. The JPL ring bus allows for interconnection of active units with autonomous operation and increased fault handling at high bandwidths. It minimizes the flight software interface with an intelligent physical layer design that has few states to manage as well as simplified testability. The design will soon be documented in the AS-1393 standard (Serial Hi-Rel Ring Network for Aerospace Applications). The framework is designed for "Class A" spacecraft operation and provides redundant data paths. It is based on "fault containment regions" and "redundant functional regions (RFR)" and has a method for allocating cables that completely supports the redundancy in spacecraft design, allowing for a complete RFR to fail. This design reduces the mass of the bus by incorporating both the Control Unit and the Data Unit in the same hardware. The standard uses ATM (asynchronous transfer mode) packets, standardized by ITU-T, ANSI, ETSI, and the ATM Forum. The IEEE-1393 standard uses the UNI form of the packet and provides no protection for the data portion of the cell. The JPL design adds optional formatting to this data portion. This design extends fault protection beyond that of the interconnect. This includes adding protection to the data portion that is contained within the Bus Interface Units (BIUs) and by adding to the signal interface between the Data Host and the JPL 1393 Ring Bus. Data transfer on the ring bus does not involve a master or initiator. Following bus protocol, any BIU may transmit data on the ring whenever it has data received from its host. There

  15. Hybrid fuel cell bus demonstration: advanced technology moves bus forward

    International Nuclear Information System (INIS)

    The Province of Manitoba has been actively pursuing hydrogen since 2001 as one part of a portfolio of renewable energy alternatives. Six priority hydrogen actions have been underway covering a variety of opportunities, including two recently completed major transit bus and refueling demonstrations. A brief overview of Manitoba's activities on hydrogen will be provided, emphasizing the lessons learned from recent projects such as the hydrogen Hybrid Fuel Cell Bus demonstration, and in particular implications for the research community. (author)

  16. BUS 402 UOP Course Tutorial/ Tutorialrank

    OpenAIRE

    jonh

    2015-01-01

    For more course tutorials visit www.tutorialrank.com Tutorial Purchased: 4 Times, Rating: A+   ASHFORD BUS 402 Week 1 DQ 1 Environmental Changes ASHFORD BUS 402 Week 1 DQ 2 Vision and Mission ASHFORD BUS 402 Week 2 DQ 1 Components of External Environment ASHFORD BUS 402 Week 2 DQ 2 Components of Internal Analysis ASHFORD BUS 402 Week 2 Assignment Starbucks S.W.O.T. Analysis ASHFORD BUS 402 Week 3 DQ 1 Market Positioning Strategies ASHFORD BUS 402 W...

  17. Alternative splicing and muscular dystrophy

    OpenAIRE

    Pistoni, Mariaelena; Ghigna, Claudia; Gabellini, Davide

    2010-01-01

    Alternative splicing of pre-mRNAs is a major contributor to proteomic diversity and to the control of gene expression in higher eukaryotic cells. For this reasons, alternative splicing is tightly regulated in different tissues and developmental stages and its disruption can lead to a wide range of human disorders. The aim of this review is to focus on the relevance of alternative splicing for muscle function and muscle disease. We begin by giving a brief overview of alternative splicing, musc...

  18. BUS 501 Str course tutorial / uophelp

    OpenAIRE

    uophel

    2015-01-01

    For more course tutorials visit www.uophelp.com     BUS 501 Week 3 Assignment 1 The Independent Government Cost Estimate and the Statement of Work (Str Course) BUS 501 Week 4 Assignment 2 Types of Contracts and Performance-Based Acquisition (Str Course) BUS 501 Week 7 Assignment 3 Small Business Program and Source Selection Plans (Str Course) BUS 501 Assignment 4 Technical and Cost or Price Evaluations and Price Reasonableness (Str Course) BUS 501 Wee...

  19. BUS 599 Str course tutorial / uophelp

    OpenAIRE

    uophelp

    2015-01-01

    For more course tutorials visit www.uophelp.com   BUS 599 Week 1 Assignment Crafting and Executing Strategy Case JetBlue Airways BUS 599 Assignment #2 Competitive Forces and SWOT Analysis # Case Whole Foods Market BUS 599 Week 3 Assignment Foreign Market Entry and Diversification Case Corona Beer BUS 599 Week 4 Assignment HRM Issues Diversification Strategies Case Nucor Corporation BUS 599 Week 5 Assignment Corporate Culture Leadership Actions for Strategy Imp...

  20. SCHOOL BUS GARAGES, 1966 REVISION.

    Science.gov (United States)

    JOHNSON, HERBERT F.

    STANDARDS AND RECOMMENDATIONS ARE GIVEN FOR THE DESIGN AND CONSTRUCTION OF SCHOOL BUS GARAGES INCLUDING BRIEF DISCUSSIONS OF--(1) SITE DEVELOPMENT, (2) DESIGN AND CONSTRUCTION, AND (3) MECHANICAL (HEATING, PLUMBING, AND VENTILATION) AND ELECTRICAL FACTORS. (JT)

  1. Hydrogen Bus Technology Validation Program

    OpenAIRE

    Burke, Andy; McCaffrey, Zach; Miller, Marshall; Collier, Kirk; Mulligan, Neal

    2005-01-01

    Heavy duty engines are substantial contributors to NOX and PM emissions inventories in urban areas, and stringent emissions standards have been adopted as a consequence. CARB has passed very strict emissions standards for heavy duty engines beginning in 2007. Meeting these standards, especially for NOX emissions, may be difficult for conventional transit bus technologies. The purpose of the Hydrogen Bus Technology Evaluation Program was to develop and evaluate hydrogen enriched natural gas (H...

  2. SpliceDisease database: linking RNA splicing and disease.

    Science.gov (United States)

    Wang, Juan; Zhang, Jie; Li, Kaibo; Zhao, Wei; Cui, Qinghua

    2012-01-01

    RNA splicing is an important aspect of gene regulation in many organisms. Splicing of RNA is regulated by complicated mechanisms involving numerous RNA-binding proteins and the intricate network of interactions among them. Mutations in cis-acting splicing elements or its regulatory proteins have been shown to be involved in human diseases. Defects in pre-mRNA splicing process have emerged as a common disease-causing mechanism. Therefore, a database integrating RNA splicing and disease associations would be helpful for understanding not only the RNA splicing but also its contribution to disease. In SpliceDisease database, we manually curated 2337 splicing mutation disease entries involving 303 genes and 370 diseases, which have been supported experimentally in 898 publications. The SpliceDisease database provides information including the change of the nucleotide in the sequence, the location of the mutation on the gene, the reference Pubmed ID and detailed description for the relationship among gene mutations, splicing defects and diseases. We standardized the names of the diseases and genes and provided links for these genes to NCBI and UCSC genome browser for further annotation and genomic sequences. For the location of the mutation, we give direct links of the entry to the respective position/region in the genome browser. The users can freely browse, search and download the data in SpliceDisease at http://cmbi.bjmu.edu.cn/sdisease.

  3. Bus Stop - Environment Connection: Do Characteristics of the Built Environment Correlate with Bus Stop Crime?

    OpenAIRE

    Robin S Liggett; Loukaitou-Sideris, Anastasia; Iseki, Hiroyuki

    2003-01-01

    Can we understand why some bus stops are safe and others are crime-ridden? Can we predict which features of the bus stop environment are likely to encourage or discourage crime? Can we design safer bus stops? These questions are addressed by exploring the relationship between environmental variables and bus stop crime. An earlier study used crime data, along with environmental indicators, for a sample of 60 bus stops in downtown Los Angeles. Crime rates were higher for bus stops near alleys, ...

  4. Wishbone bus Architecture - A Survey and Comparison

    CERN Document Server

    Sharma, Mohandeep; 10.5121/vlsic.2012.3210

    2012-01-01

    The performance of an on-chip interconnection architecture used for communication between IP cores depends on the efficiency of its bus architecture. Any bus architecture having advantages of faster bus clock speed, extra data transfer cycle, improved bus width and throughput is highly desirable for a low cost, reduced time-to-market and efficient System-on-Chip (SoC). This paper presents a survey of WISHBONE bus architecture and its comparison with three other on-chip bus architectures viz. Advanced Micro controller Bus Architecture (AMBA) by ARM, CoreConnect by IBM and Avalon by Altera. The WISHBONE Bus Architecture by Silicore Corporation appears to be gaining an upper edge over the other three bus architecture types because of its special performance parameters like the use of flexible arbitration scheme and additional data transfer cycle (Read-Modify-Write cycle). Moreover, its IP Cores are available free for use requiring neither any registration nor any agreement or license.

  5. Spliced leader trans-splicing in the nematode Trichinella spiralis uses highly polymorphic, noncanonical spliced leaders

    OpenAIRE

    Pettitt, Jonathan; Müller, Berndt; Stansfield, Ian; Connolly, Bernadette

    2008-01-01

    The trans-splicing of short spliced leader (SL) RNAs onto the 5′ ends of mRNAs occurs in a diverse range of taxa. In nematodes, all species so far characterized utilize a characteristic, conserved spliced leader, SL1, as well as variants that are employed in the resolution of operons. Here we report the identification of spliced leader trans-splicing in the basal nematode Trichinella spiralis, and show that this nematode does not possess a canonical SL1, but rather has at least 15 distinct sp...

  6. BUS 210 UOP Course Tutorial/ Tutorialrank

    OpenAIRE

    john

    2015-01-01

                      For more course tutorials visit www.tutorialrank.com Tutorial Purchased: 6 Times, Rating: A+   BUS 210 Week 1 DQ1 and DQ2 (UOP Course) BUS 210 Week 1 Checkpoint Business Models and Systems (UOP Course) BUS 210 Week 2 CheckPoint Business Organization (UOP Course) BUS 210 Week 2 Assignment Evolution of Business Presentation (UOP Course) BUS 210 Week 3 DQ 1 and DQ 2 (UOP Course) BUS 210 W...

  7. Bar dimensions and bar shapes in estuaries

    Science.gov (United States)

    Leuven, Jasper; Kleinhans, Maarten; Weisscher, Steven; van der Vegt, Maarten

    2016-04-01

    Estuaries cause fascinating patterns of dynamic channels and shoals. Intertidal sandbars are valuable habitats, whilst channels provide access to harbors. We still lack a full explanation and classification scheme for the shapes and dimensions of bar patterns in natural estuaries, in contrast with bars in rivers. Analytical physics-based models suggest that bar length in estuaries increases with flow velocity, tidal excursion length or estuary width, depending on which model. However, these hypotheses were never validated for lack of data and experiments. We present a large dataset and determine the controls on bar shape and dimensions in estuaries, spanning bar lengths from centimeters (experiments) to 10s of kilometers length. First, we visually identified and classified 190 bars, measured their dimensions (width, length, height) and local braiding index. Data on estuarine geometry and tidal characteristics were obtained from governmental databases and literature on case studies. We found that many complex bars can be seen as simple elongated bars partly cut by mutually evasive ebb- and flood-dominated channels. Data analysis shows that bar dimensions scale with estuary dimensions, in particular estuary width. Breaking up the complex bars in simple bars greatly reduced scatter. Analytical bar theory overpredicts bar dimensions by an order of magnitude in case of small estuarine systems. Likewise, braiding index depends on local width-to-depth ratio, as was previously found for river systems. Our results suggest that estuary dimensions determine the order of magnitude of bar dimensions, while tidal characteristics modify this. We will continue to model bars numerically and experimentally. Our dataset on tidal bars enables future studies on the sedimentary architecture of geologically complex tidal deposits and enables studying effects of man-induced perturbations such as dredging and dumping on bar and channel patterns and habitats.

  8. Aids to School Bus Design

    Science.gov (United States)

    1991-01-01

    Navistar International Transportation Corporation, Chicago, IL, used three separate NASA-developed technologies in the design and testing of their 3000 Series Bus Chassis which was developed expressly for school bus applications. For structural analysis, they used the MSC/NASTRAN program which mathematically analyzes a design and predicts how it will hold up under stress. They also used the SPATE 9000 system for non-contact measurement of stress, load transfer mechanisms, detection of hidden flaws, and monitoring structural changes during fatigue testing. SPATE 9000 was based on infrared stress measurement technology developed by Langley Research Center. They also employed the Wyle Ride Quality Meter, which was developed by Langley to aid in passenger aircraft design by providing an accurate measurement of ride vibration and sound level. These numbers translate into a subjective discomfort level index. These technologies contribute to the company's 45-48 percent share of the school bus chassis market.

  9. School bus and children's traffic safety

    Institute of Scientific and Technical Information of China (English)

    PAN Shu-ming; Stephen Hargarten; ZHU Shan-kuan

    2007-01-01

    There is no safer way to transport a child than a school bus. Fatal crashes involving occupants are extremely rare events in the US. In recent years, school bus transportation began to develop in China. We want to bring advanced experience on school bus safety in Western countries such as the US to developing countries.Methods: We searched the papers related to school bus safety from Medline, Chinese Scientific Journals Database and the Web of the National Highway Traffic Safety Administration (NHTSA).Results: There were only 9 papers related to school bus safety, which showed that higher levels of safety standards on school buses, school bus-related transportation and environmental laws and injury prevention were the primary reasons for the desired outcome. Few school bus is related to deaths and injuries in the developed countries.Conclusions: The developing countries should make strict environmental laws and standards on school bus safety to prevent children's injury and death.

  10. The neurogenetics of alternative splicing

    OpenAIRE

    Vuong, CK; Black, DL; S. Zheng

    2016-01-01

    Alternative precursor-mRNA splicing is a key mechanism for regulating gene expression in mammals and is controlled by specialized RNA-binding proteins. The misregulation of splicing is implicated in multiple neurological disorders. We describe recent mouse genetic studies of alternative splicing that reveal its critical role in both neuronal development and the function of mature neurons. We discuss the challenges in understanding the extensive genetic programmes controlled by proteins that r...

  11. HERMES travels by CAN bus

    Science.gov (United States)

    Waller, Lewis G.; Shortridge, Keith; Farrell, Tony J.; Vuong, Minh; Muller, Rolf; Sheinis, Andrew I.

    2014-07-01

    The new HERMES spectrograph represents the first foray by AAO into the use of commercial off-the-shelf industrial field bus technology for instrument control, and we regard the final system, with its relatively simple wiring requirements, as a great success. However, both software and hardware teams had to work together to solve a number of problems integrating the chosen CANopen/CAN bus system into our normal observing systems. A Linux system running in an industrial PC chassis ran the HERMES control software, using a PCI CAN bus interface connected to a number of distributed CANopen/CAN bus I/O devices and servo amplifiers. In the main, the servo amplifiers performed impressively, although some experimentation with homing algorithms was required, and we hit a significant hurdle when we discovered that we needed to disable some of the encoders used during observations; we learned a lot about how servo amplifiers respond when their encoders are turned off, and about how encoders react to losing power. The software was based around a commercial CANopen library from Copley Controls. Early worries about how this heavily multithreaded library would work with our standard data acquisition system led to the development of a very low-level CANopen software simulator to verify the design. This also enabled the software group to develop and test almost all the control software well in advance of the construction of the hardware. In the end, the instrument went from initial installation at the telescope to successful commissioning remarkably smoothly.

  12. Low-inductance bus lines

    Science.gov (United States)

    Kernick, A.

    1977-01-01

    Laminated bus strips and bifilar litz cable connectors for high-power rectifiers, thrisistors, and transistors provide low inductance and eliminate electromagnetic interference in high-power circuits. These techniques offer significant cost advantages because of ease of assembly and consistent high quality of product. Effectiveness makes general usage in static power conversion likely.

  13. Pybus -- A Python Software Bus

    Energy Technology Data Exchange (ETDEWEB)

    Lavrijsen, Wim T.L.P.

    2004-10-14

    A software bus, just like its hardware equivalent, allows for the discovery, installation, configuration, loading, unloading, and run-time replacement of software components, as well as channeling of inter-component communication. Python, a popular open-source programming language, encourages a modular design on software written in it, but it offers little or no component functionality. However, the language and its interpreter provide sufficient hooks to implement a thin, integral layer of component support. This functionality can be presented to the developer in the form of a module, making it very easy to use. This paper describes a Pythonmodule, PyBus, with which the concept of a ''software bus'' can be realized in Python. It demonstrates, within the context of the ATLAS software framework Athena, how PyBus can be used for the installation and (run-time) configuration of software, not necessarily Python modules, from a Python application in a way that is transparent to the end-user.

  14. Pybus - A Python Software Bus

    International Nuclear Information System (INIS)

    A software bus, just like its hardware equivalent, allows for the discovery, installation, configuration, loading, unloading, and run-time replacement of software components, as well as channeling of inter-component communication. Python, a popular open-source programming language, encourages a modular design on software written in it, but it offers little or no component functionality. However, the language and its interpreter provide sufficient hooks to implement a thin, integral layer of component support. This functionality can be presented to the developer in the form of a module, making it very easy to use. This paper describes a Pythonmodule, PyBus, with which the concept of a ''software bus'' can be realized in Python. It demonstrates, within the context of the ATLAS software framework Athena, how PyBus can be used for the installation and (run-time) configuration of software, not necessarily Python modules, from a Python application in a way that is transparent to the end-user

  15. Methods for Characterization of Alternative RNA Splicing.

    Science.gov (United States)

    Harvey, Samuel E; Cheng, Chonghui

    2016-01-01

    Quantification of alternative splicing to detect the abundance of differentially spliced isoforms of a gene in total RNA can be accomplished via RT-PCR using both quantitative real-time and semi-quantitative PCR methods. These methods require careful PCR primer design to ensure specific detection of particular splice isoforms. We also describe analysis of alternative splicing using a splicing "minigene" in mammalian cell tissue culture to facilitate investigation of the regulation of alternative splicing of a particular exon of interest.

  16. Mutual interdependence of splicing and transcription elongation.

    Science.gov (United States)

    Brzyżek, Grzegorz; Świeżewski, Szymon

    2015-01-01

    Transcription and splicing are intrinsically linked, as splicing needs a pre-mRNA substrate to commence. The more nuanced view is that the rate of transcription contributes to splicing regulation. On the other hand there is accumulating evidence that splicing has an active role in controlling transcription elongation by DNA-dependent RNA polymerase II (RNAP II). We briefly review those mechanisms and propose a unifying model where splicing controls transcription elongation to provide an optimal timing for successive rounds of splicing.

  17. Inverse splicing of a group II intron.

    OpenAIRE

    Jarrell, K A

    1993-01-01

    I describe the self-splicing of an RNA that consists of exon sequences flanked by group II intron sequences. I find that this RNA undergoes accurate splicing in vitro, yielding an excised exon circle. This splicing reaction involves the joining of the 5' splice site at the end of an exon to the 3' splice site at the beginning of the same exon; thus, I term it inverse splicing. Inverse splicing provides a potential mechanism for exon scrambling, for exon deletion in alternative splicing pathwa...

  18. Analysis of robustness of urban bus network

    Science.gov (United States)

    Tao, Ren; Yi-Fan, Wang; Miao-Miao, Liu; Yan-Jie, Xu

    2016-02-01

    In this paper, the invulnerability and cascade failures are discussed for the urban bus network. Firstly, three static models(bus stop network, bus transfer network, and bus line network) are used to analyse the structure and invulnerability of urban bus network in order to understand the features of bus network comprehensively. Secondly, a new way is proposed to study the invulnerability of urban bus network by modelling two layered networks, i.e., the bus stop-line network and the bus line-transfer network and then the interactions between different models are analysed. Finally, by modelling a new layered network which can reflect the dynamic passenger flows, the cascade failures are discussed. Then a new load redistribution method is proposed to study the robustness of dynamic traffic. In this paper, the bus network of Shenyang City which is one of the biggest cities in China, is taken as a simulation example. In addition, some suggestions are given to improve the urban bus network and provide emergency strategies when traffic congestion occurs according to the numerical simulation results. Project supported by the National Natural Science Foundation of China (Grant Nos. 61473073, 61374178, 61104074, and 61203329), the Fundamental Research Funds for the Central Universities (Grant Nos. N130417006, L1517004), and the Program for Liaoning Excellent Talents in University (Grant No. LJQ2014028).

  19. Electrical system architecture having high voltage bus

    Science.gov (United States)

    Hoff, Brian Douglas; Akasam, Sivaprasad

    2011-03-22

    An electrical system architecture is disclosed. The architecture has a power source configured to generate a first power, and a first bus configured to receive the first power from the power source. The architecture also has a converter configured to receive the first power from the first bus and convert the first power to a second power, wherein a voltage of the second power is greater than a voltage of the first power, and a second bus configured to receive the second power from the converter. The architecture further has a power storage device configured to receive the second power from the second bus and deliver the second power to the second bus, a propulsion motor configured to receive the second power from the second bus, and an accessory motor configured to receive the second power from the second bus.

  20. BUS 620 ASHFORD Course Tutorial/TutorialRank

    OpenAIRE

    atwater

    2015-01-01

    For more course tutorials visit www.tutorialrank.com Tutorial Purchased: 4 Times, Rating: A   ASHFORD BUS 620 Week 1 DQ 1 What is Marketing   ASHFORD BUS 620 Week 1 DQ 2 Marketing Strategies   ASHFORD BUS 620 Week 1 Assignment Tesco Case   ASHFORD BUS 620 Week 2 DQ 1 Buyer Behavior   ASHFORD BUS 620 Week 2 DQ 2 Customer Needs   ASHFORD BUS 620 Week 2 Industry Forecasting   ASHFORD BUS 620 Week 3...

  1. BUS 660 ASHFORD Course Tutorial/TutorialRank

    OpenAIRE

    john

    2015-01-01

    For more course tutorials visit www.tutorialrank.com Tutorial Purchased: 4 Times, Rating: A+   BUS 660 Week 1 Assignment Developing Leaders at UPS  BUS 660 Week 2 Assignment Leadership Style  BUS 660 Week 3 Assignment Leadership Traits  BUS 660 Week 4 Assignment Leadership Skills  BUS 660 Week 5 Assignment Big Changes for a Small Hospital  BUS 660 Week 6 Assignment Research Paper BUS 660 Week 1 DQ 1Leadership Defined BU...

  2. PinBus Interface Design

    Energy Technology Data Exchange (ETDEWEB)

    Hammerstrom, Donald J.; Adgerson, Jewel D.; Sastry, Chellury; Pratt, Richard M.; Pratt, Robert G.

    2009-12-30

    On behalf of the U.S. Department of Energy, PNNL has explored and expanded upon a simple control interface that might have merit for the inexpensive communication of smart grid operational objectives (demand response, for example) to small electric end-use devices and appliances. The approach relies on bi-directional communication via the electrical voltage states of from one to eight shared interconnection pins. The name PinBus has been suggested and adopted for the proposed interface protocol. The protocol is defined through the presentation of state diagrams and the pins’ functional definitions. Both simulations and laboratory demonstrations are being conducted to demonstrate the elegance and power of the suggested approach. PinBus supports a very high degree of interoperability across its interfaces, allowing innumerable pairings of devices and communication protocols and supporting the practice of practically any smart grid use case.

  3. New TPG bus route 28

    CERN Multimedia

    2003-01-01

    Geneva's Public Transport services (TPG) have recently inaugurated a new bus line 28, connecting the La Tour Hospital in Meyrin to the international organisations in Geneva, via the airport. All signs associated with this route will be yellow in colour. Timetables and route details can be found at http://www.tpg.ch. Relations with the Host States Service http://www.cern.ch/relations/ Tel. 72848

  4. Intronic Alus influence alternative splicing.

    Directory of Open Access Journals (Sweden)

    Galit Lev-Maor

    Full Text Available Examination of the human transcriptome reveals higher levels of RNA editing than in any other organism tested to date. This is indicative of extensive double-stranded RNA (dsRNA formation within the human transcriptome. Most of the editing sites are located in the primate-specific retrotransposed element called Alu. A large fraction of Alus are found in intronic sequences, implying extensive Alu-Alu dsRNA formation in mRNA precursors. Yet, the effect of these intronic Alus on splicing of the flanking exons is largely unknown. Here, we show that more Alus flank alternatively spliced exons than constitutively spliced ones; this is especially notable for those exons that have changed their mode of splicing from constitutive to alternative during human evolution. This implies that Alu insertions may change the mode of splicing of the flanking exons. Indeed, we demonstrate experimentally that two Alu elements that were inserted into an intron in opposite orientation undergo base-pairing, as evident by RNA editing, and affect the splicing patterns of a downstream exon, shifting it from constitutive to alternative. Our results indicate the importance of intronic Alus in influencing the splicing of flanking exons, further emphasizing the role of Alus in shaping of the human transcriptome.

  5. MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery

    OpenAIRE

    Kai WANG; Singh, Darshan; Zeng, Zheng; Coleman, Stephen J.; Huang, Yan; Savich, Gleb L.; He, Xiaping; Mieczkowski, Piotr; Grimm, Sara A; Perou, Charles M; MacLeod, James N; Chiang, Derek Y.; Prins, Jan F.; Liu, Jinze

    2010-01-01

    The accurate mapping of reads that span splice junctions is a critical component of all analytic techniques that work with RNA-seq data. We introduce a second generation splice detection algorithm, MapSplice, whose focus is high sensitivity and specificity in the detection of splices as well as CPU and memory efficiency. MapSplice can be applied to both short (

  6. Bus Routes, Marta Bus Routes located in Transportation database, Published in unknown, City of Roswell, GA.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Bus Routes dataset as of unknown. It is described as 'Marta Bus Routes located in Transportation database'. Data by this publisher are often provided in State...

  7. Conserved RNA secondary structures promote alternative splicing

    OpenAIRE

    Shepard, PJ; Hertel, KJ

    2008-01-01

    Pre-mRNA splicing is carried out by the spliceosome, which identifies exons and removes intervening introns. Alternative splicing in higher eukaryotes results in the generation of multiple protein isoforms from gene transcripts. The extensive alternative splicing observed implies a flexibility of the spliceosome to identify exons within a given pre-mRNA. To reach this flexibility, splice-site selection in higher eukaryotes has evolved to depend on multiple parameters such as splice-site stren...

  8. Engineering splicing factors with designed specificities

    OpenAIRE

    Wang, Yang; Cheong, Cheom-Gil; Hall, Traci M Tanaka; Wang, Zefeng

    2009-01-01

    Alternative splicing is generally regulated by trans-acting factors that specifically bind pre-mRNA to activate or inhibit the splicing reaction. This regulation is critical for normal gene expression, and dysregulation of splicing is closely associated with human diseases. Here we engineer artificial splicing factors by combining sequence-specific RNA-binding domains of human Pumilio1 with functional domains that regulate splicing. We applied these factors to modulate different types of alte...

  9. YUTONG BUS: Grateful To The Financial Crisis

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Shenyin&Wanguo Securities issued an announcement on Jan 9 rating Yutong Bus(600066)as"buying",on the basis that the bus maker's gross profits went better in the last quarter of 2008 and to be further improved in the first quarter of 2009,with an increased market share. The report drew attention inside the in- dustry when the entire bus segment was suffering a tough time.

  10. Barred Owl [ds8

    Data.gov (United States)

    California Department of Resources — These data define the current range of Barred and hybrid Barred/Spotted Owls in California. The current range includes the coastal mountains of northern California...

  11. Wishbone Bus Architecture - A Survey and Comparison

    Directory of Open Access Journals (Sweden)

    Mohandeep Sharma

    2012-05-01

    Full Text Available The performance of an on-chip interconnection architecture used for communication between IP cores depends on the efficiency of its bus architecture. Any bus architecture having advantages of faster bus clock speed, extra data transfer cycle, improved bus width and throughput is highly desirable for a low cost, reduced time-to-market and efficient System-on-Chip (SoC. This paper presents a survey of WISHBONE bus architecture and its comparison with three other on-chip bus architectures viz. Advanced Microcontroller Bus Architecture (AMBA by ARM, CoreConnect by IBM and Avalon by Altera. The WISHBONE Bus Architecture by Silicore Corporation appears to be gaining an upper edge over the other three bus architecture types because of its special performance parameters like the use of flexible arbitration scheme and additional data transfer cycle (Read-Modify-Write cycle. Moreover, its IP Cores are available free for use requiring neither any registration nor any agreement or license.

  12. Methods to detect faulty splices in the superconducting magnet system of the LHC

    CERN Document Server

    Bailey, R; Catalan Lasheras, N; Dahlerup-Petersen, K; Denz, R; Robles, C; Koratzinos, M; Pojer, M; Ponce, L; Saban, R; Schmidt, R; Siemko, A; Solfaroli Camillocci, M; Thiesen, H; Vergara Fernandez, A; Flora, R H; Charifoulline, Z; Bednarek, M; Górnicki, E; Jurkiewicz, P; Kapusta, P; Strait, J

    2010-01-01

    The incident of 19 September 2008 at the LHC was caused by a faulty inter-magnet splice of about 200 nΩ resistance. Cryogenic and electrical techniques have been developed to detect other abnormal splices, either between or inside the magnets. The existing quench protection system can be used to detect internal splices with R>20 nΩ. Since this system does not cover the bus between magnets, the cryogenic system is used to measure the rate of temperature rise due to ohmic heating. Accuracy of a few mK/h, corresponding to a few Watts, has been achieved, allowing detection of excess resistance, if it is more than 40 nΩ in a cryogenic subsector (two optical cells). Follow-up electrical measurements are made in regions identified by the cryogenic system. These techniques have detected two abnormal internal magnet splices of 100 nΩ and 50 nΩ respectively. In 2009, this ad hoc system will be replaced with a permanent one to monitor all splices at the nΩ level.

  13. Integrating many co-splicing networks to reconstruct splicing regulatory modules

    OpenAIRE

    Dai Chao; Li Wenyuan; Liu Juan; Zhou Xianghong

    2012-01-01

    Abstract Background Alternative splicing is a ubiquitous gene regulatory mechanism that dramatically increases the complexity of the proteome. However, the mechanism for regulating alternative splicing is poorly understood, and study of coordinated splicing regulation has been limited to individual cases. To study genome-wide splicing regulation, we integrate many human RNA-seq datasets to identify splicing module, which we define as a set of cassette exons co-regulated by the same splicing f...

  14. Alternative Splicing Regulation During C. elegans Development: Splicing Factors as Regulated Targets

    OpenAIRE

    Sergio Barberan-Soler; Zahler, Alan M.

    2008-01-01

    Alternative splicing generates protein diversity and allows for post-transcriptional gene regulation. Estimates suggest that 10% of the genes in Caenorhabditis elegans undergo alternative splicing. We constructed a splicing-sensitive microarray to detect alternative splicing for 352 cassette exons and tested for changes in alternative splicing of these genes during development. We found that the microarray data predicted that 62/352 (approximately 18%) of the alternative splicing events studi...

  15. A new bus lane on urban expressway with no-bay bus stop

    Science.gov (United States)

    Tian, Zhao; Jia, Limin

    2016-01-01

    The sharp increase in residents and vehicles causes heavy traffic pressure in many cities. To ease traffic congestion, it has been the common sense that we should develop public transit system. The priority of the bus appears particularly necessary with the rapid development of the public transport system. The bus lane is an important embodiment of the bus priority. Focusing on the problem of the unreasonable dedicated bus lane (DBL) under the lower ratio of buses, this paper proposed a new bus lane with limited physical length. And this bus lane can reduce the lane-changing conflict caused by the buses and cars running on roads without bus lanes. Based on the cellular automata (CA) traffic flow model and the lane-changing behavior of the vehicle including the optional lane-changing and the mandatory lane-changing, a three-lane traffic model with an isolated no-bay bus stop is proposed. The ordinary three-lane traffic without a bus lane and the cases of traffic with a DBL or the proposed bus lane are simulated, and the comparisons in the form of the fundamental diagrams are made among them. It is shown that the no-bay bus stop can act as a bottleneck on the traffic flow because of the mandatory lane-changing behavior. Under a certain ratio of the bus number to the total vehicles number, (1) the traffic with the proposed bus lane has less lane-changing conflict and can provide higher traffic capacity than the ordinary traffic without a bus lane, (2) compared with the DBL, the proposed bus lane is advantageous in easing congestion on the ordinary lanes when the traffic flow is high and can avoid unreasonable allocation of the road resources.

  16. On Modified Bar recursion

    DEFF Research Database (Denmark)

    Oliva, Paulo Borges

    2002-01-01

    Modified bar recursion is a variant of Spector's bar recursion which can be used to give a realizability interpretation of the classical axiom of dependent choice. This realizability allows for the extraction of witnesses from proofs of forall-exists-formulas in classical analysis. In this talk I...... shall report on results regarding the relationship between modified and Spector's bar recursion. I shall also show that a seemingly weak form of modified bar recursion is as strong as "full" modified bar recursion in higher types....

  17. Targeting RNA splicing for disease therapy.

    Science.gov (United States)

    Havens, Mallory A; Duelli, Dominik M; Hastings, Michelle L

    2013-01-01

    Splicing of pre-messenger RNA into mature messenger RNA is an essential step for the expression of most genes in higher eukaryotes. Defects in this process typically affect cellular function and can have pathological consequences. Many human genetic diseases are caused by mutations that cause splicing defects. Furthermore, a number of diseases are associated with splicing defects that are not attributed to overt mutations. Targeting splicing directly to correct disease-associated aberrant splicing is a logical approach to therapy. Splicing is a favorable intervention point for disease therapeutics, because it is an early step in gene expression and does not alter the genome. Significant advances have been made in the development of approaches to manipulate splicing for therapy. Splicing can be manipulated with a number of tools including antisense oligonucleotides, modified small nuclear RNAs (snRNAs), trans-splicing, and small molecule compounds, all of which have been used to increase specific alternatively spliced isoforms or to correct aberrant gene expression resulting from gene mutations that alter splicing. Here we describe clinically relevant splicing defects in disease states, the current tools used to target and alter splicing, specific mutations and diseases that are being targeted using splice-modulating approaches, and emerging therapeutics.

  18. Mastering NServiceBus and persistence

    CERN Document Server

    Helton, Rich

    2014-01-01

    This book is intended for developers, designers, and architects alike who wish to build C# NServiceBus enterprise architectures and learn how ESB persists data and messages to help them attain their goals. No prior knowledge of persistence in NServiceBus is required.

  19. Methods for Characterization of Alternative RNA Splicing

    Science.gov (United States)

    Harvey, Samuel E.; Cheng, Chonghui

    2016-01-01

    Quantification of alternative splicing to detect the abundance of differentially spliced isoforms of a gene in total RNA can be accomplished via RT-PCR using both quantitative real-time and semi-quantitative PCR methods. These methods require careful PCR primer design to ensure specific detection of particular splice isoforms. We also describe analysis of alternative splicing using a splicing “minigene” in mammalian cell tissue culture to facilitate investigation of the regulation of alternative splicing of a particular exon of interest. PMID:26721495

  20. Observation of B0bar --> D0 K0bar and B0bar --> D0 K*0bar decays

    CERN Document Server

    Krokovnyi, P P

    2003-01-01

    We report on a search for B0bar --> D0 K(*)0bar decays based on 85 10^6 BBar events collected with the Belle detector at KEKB. The B0bar --> D0 K0bar and B0bar --> D0 K*0bar decays have been observed for the first time with the branching fractions Br(B0bar --> D0 K0bar) = (5.0^{+1.3}_{-1.2}+- 0.6) 10^{-5} and Br(B0bar --> D0 K*0bar) = (4.8^{+1.1}_{-1.0}+- 0.5) 10^{-5}. No significant signal has been found for the B0bar --> D*0 K(*)0bar and B0bar --> D(*)0bar K*0bar decay modes, and upper limits at 90% CL are presented.

  1. MapSplice: accurate mapping of RNA-seq reads for splice junction discovery.

    Science.gov (United States)

    Wang, Kai; Singh, Darshan; Zeng, Zheng; Coleman, Stephen J; Huang, Yan; Savich, Gleb L; He, Xiaping; Mieczkowski, Piotr; Grimm, Sara A; Perou, Charles M; MacLeod, James N; Chiang, Derek Y; Prins, Jan F; Liu, Jinze

    2010-10-01

    The accurate mapping of reads that span splice junctions is a critical component of all analytic techniques that work with RNA-seq data. We introduce a second generation splice detection algorithm, MapSplice, whose focus is high sensitivity and specificity in the detection of splices as well as CPU and memory efficiency. MapSplice can be applied to both short (<75 bp) and long reads (≥ 75 bp). MapSplice is not dependent on splice site features or intron length, consequently it can detect novel canonical as well as non-canonical splices. MapSplice leverages the quality and diversity of read alignments of a given splice to increase accuracy. We demonstrate that MapSplice achieves higher sensitivity and specificity than TopHat and SpliceMap on a set of simulated RNA-seq data. Experimental studies also support the accuracy of the algorithm. Splice junctions derived from eight breast cancer RNA-seq datasets recapitulated the extensiveness of alternative splicing on a global level as well as the differences between molecular subtypes of breast cancer. These combined results indicate that MapSplice is a highly accurate algorithm for the alignment of RNA-seq reads to splice junctions. Software download URL: http://www.netlab.uky.edu/p/bioinfo/MapSplice. PMID:20802226

  2. The four bars problem

    Science.gov (United States)

    Mauroy, Alexandre; Taslakian, Perouz; Langerman, Stefan; Jungers, Raphaël

    2016-09-01

    A four-bar linkage is a mechanism consisting of four rigid bars which are joined by their endpoints in a polygonal chain and which can rotate freely at the joints (or vertices). We assume that the linkage lies in the 2-dimensional plane so that one of the bars is held horizontally fixed. In this paper we consider the problem of reconfiguring a four-bar linkage using an operation called a pop. Given a four-bar linkage, a pop reflects a vertex across the line defined by its two adjacent vertices along the polygonal chain. Our main result shows that for certain conditions on the lengths of the bars, the neighborhood of any configuration that can be reached by smooth motion can also be reached by pops. The proof relies on the fact that pops are described by a map on the circle with an irrational number of rotation.

  3. High speed bus technology development

    Science.gov (United States)

    Modrow, Marlan B.; Hatfield, Donald W.

    1989-09-01

    The development and demonstration of the High Speed Data Bus system, a 50 Million bits per second (Mbps) local data network intended for avionics applications in advanced military aircraft is described. The Advanced System Avionics (ASA)/PAVE PILLAR program provided the avionics architecture concept and basic requirements. Designs for wire and fiber optic media were produced and hardware demonstrations were performed. An efficient, robust token-passing protocol was developed and partially demonstrated. The requirements specifications, the trade-offs made, and the resulting designs for both a coaxial wire media system and a fiber optics design are examined. Also, the development of a message-oriented media access protocol is described, from requirements definition through analysis, simulation and experimentation. Finally, the testing and demonstrations conducted on the breadboard and brassboard hardware is presented.

  4. EASI—enrichment of alternatively spliced isoforms

    OpenAIRE

    Julian P Venables; Burn, John

    2006-01-01

    Alternative splicing produces more than one protein from the majority of genes and the rarer forms can have dominant functions. Instability of alternative transcripts can also hinder the study of regulation of gene expression by alternative splicing. To investigate the true extent of alternative splicing we have developed a simple method of enriching alternatively spliced isoforms (EASI) from PCRs using beads charged with Thermus aquaticus single-stranded DNA-binding protein (T.Aq ssb). This ...

  5. Mechano-Regulation of Alternative Splicing

    OpenAIRE

    Liu, Huan; Tang, Liling

    2013-01-01

    Alternative splicing contributes to the complexity of proteome by producing multiple mRNAs from a single gene. Affymetrix exon arrays and experiments in vivo or in vitro demonstrated that alternative splicing was regulated by mechanical stress. Expression of mechano-growth factor (MGF) which is the splicing isoform of insulin-like growth factor 1(IGF-1) and vascular endothelial growth factor (VEGF) splicing variants such as VEGF121, VEGF165, VEGF206, VEGF189, VEGF165 and VEGF145 are regulated...

  6. ASD: a bioinformatics resource on alternative splicing

    OpenAIRE

    Stamm, Stefan; Riethoven, Jean-Jack; Le Texier, Vincent; Gopalakrishnan, Chellappa; Kumanduri, Vasudev; Tang, Yesheng; Barbosa-Morais, Nuno L.; Thanaraj, Thangavel Alphonse

    2005-01-01

    Alternative splicing is an important regulatory mechanism of mammalian gene expression. The alternative splicing database (ASD) consortium is systematically collecting and annotating data on alternative splicing. We present the continuation and upgrade of the ASD [T. A. Thanaraj, S. Stamm, F. Clark, J. J. Riethoven, V. Le Texier, J. Muilu (2004) Nucleic Acids Res. 32, D64–D69] that consists of computationally and manually generated data. Its largest parts are AltSplice, a value-added database...

  7. Targeting RNA Splicing for Disease Therapy

    OpenAIRE

    Havens, Mallory A.; Duelli, Dominik M.; Hastings, Michelle L.

    2013-01-01

    Splicing of pre-messenger RNA into mature messenger RNA is an essential step for expression of most genes in higher eukaryotes. Defects in this process typically affect cellular function and can have pathological consequences. Many human genetic diseases are caused by mutations that cause splicing defects. Furthermore, a number of diseases are associated with splicing defects that are not attributed to overt mutations. Targeting splicing directly to correct disease-associated aberrant splicin...

  8. Evolution of alternative splicing after gene duplication

    OpenAIRE

    Su, Zhixi; Wang, Jianmin; Yu, Jun; Huang, Xiaoqiu; Gu, Xun

    2006-01-01

    Alternative splicing and gene duplication are two major sources of proteomic function diversity. Here, we study the evolutionary trend of alternative splicing after gene duplication by analyzing the alternative splicing differences between duplicate genes. We observed that duplicate genes have fewer alternative splice (AS) forms than single-copy genes, and that a negative correlation exists between the mean number of AS forms and the gene family size. Interestingly, we found that the loss of ...

  9. Radiation-Tolerant Dual Data Bus

    Science.gov (United States)

    Kinstler, Gary A.

    2007-01-01

    An architecture, and a method of utilizing the architecture, have been proposed to enable error-free operation of a data bus that includes, and is connected to, commercial off-the-shelf (COTS) circuits and components that are inherently susceptible to singleevent upsets [SEUs (bit flips caused by impinging high-energy particles and photons)]. The architecture and method are applicable, more specifically, to data-bus circuitry based on the Institute for Electrical and Electronics Engineers (IEEE) 1394b standard for a high-speed serial bus.

  10. Drivetrain system of an ultracapacitor electric bus

    Institute of Scientific and Technical Information of China (English)

    Kong Zhigu; Zhu Chunbo; Yang Shiyan; Cheng Shukang

    2007-01-01

    This paper proposed a design of the drivetrain system of an electric bus with ultracapacitor (UC) as the only on-board power source. The system includes three main parts, namely, UC bank, motor and the converter, vehicle management unit (VMU). Analyses results in detail on the functional design and experiments on work bench of each part were also presented, which validated the reliability of the system. Furthermore, driving results in field of the bus verified the feasibility of the design of the drivetrain system. The bus has very good dynamic performances and shows a promising applications prospect in the short and medium route buses system.

  11. Diverse alternative back-splicing and alternative splicing landscape of circular RNAs

    Science.gov (United States)

    Zhang, Xiao-Ou; Dong, Rui; Zhang, Yang; Zhang, Jia-Lin; Luo, Zheng; Zhang, Jun; Chen, Ling-Ling; Yang, Li

    2016-01-01

    Circular RNAs (circRNAs) derived from back-spliced exons have been widely identified as being co-expressed with their linear counterparts. A single gene locus can produce multiple circRNAs through alternative back-splice site selection and/or alternative splice site selection; however, a detailed map of alternative back-splicing/splicing in circRNAs is lacking. Here, with the upgraded CIRCexplorer2 pipeline, we systematically annotated different types of alternative back-splicing and alternative splicing events in circRNAs from various cell lines. Compared with their linear cognate RNAs, circRNAs exhibited distinct patterns of alternative back-splicing and alternative splicing. Alternative back-splice site selection was correlated with the competition of putative RNA pairs across introns that bracket alternative back-splice sites. In addition, all four basic types of alternative splicing that have been identified in the (linear) mRNA process were found within circRNAs, and many exons were predominantly spliced in circRNAs. Unexpectedly, thousands of previously unannotated exons were detected in circRNAs from the examined cell lines. Although these novel exons had similar splice site strength, they were much less conserved than known exons in sequences. Finally, both alternative back-splicing and circRNA-predominant alternative splicing were highly diverse among the examined cell lines. All of the identified alternative back-splicing and alternative splicing in circRNAs are available in the CIRCpedia database (http://www.picb.ac.cn/rnomics/circpedia). Collectively, the annotation of alternative back-splicing and alternative splicing in circRNAs provides a valuable resource for depicting the complexity of circRNA biogenesis and for studying the potential functions of circRNAs in different cells. PMID:27365365

  12. SAW: A Method to Identify Splicing Events from RNA-Seq Data Based on Splicing Fingerprints

    OpenAIRE

    Kang Ning; Damian Fermin

    2010-01-01

    Splicing event identification is one of the most important issues in the comprehensive analysis of transcription profile. Recent development of next-generation sequencing technology has generated an extensive profile of alternative splicing. However, while many of these splicing events are between exons that are relatively close on genome sequences, reads generated by RNA-Seq are not limited to alternative splicing between close exons but occur in virtually all splicing events. In this work, ...

  13. Alternative splicing and trans-splicing events revealed by analysis of the Bombyx mori transcriptome

    OpenAIRE

    Shao, Wei; Zhao, Qiong-Yi; Wang, Xiu-Ye; Xu, Xin-Yan; Tang, Qing; Li, Muwang; Li, Xuan; Xu, Yong-Zhen

    2012-01-01

    Alternative splicing and trans-splicing events have not been systematically studied in the silkworm Bombyx mori. Here, the silkworm transcriptome was analyzed by RNA-seq. The authors identified 320 novel genes, modified 1140 gene models, and found thousands of alternative splicing and 58 trans-splicing events. Studies of three SR proteins show that both their alternative splicing patterns and mRNA products are conserved from insect to human, and one isoform of Srsf6 with a retained intron is ...

  14. Bar-tailed

    NARCIS (Netherlands)

    Duijns, S.; Hidayati, N.A.; Piersma, T.

    2013-01-01

    Capsule Across the European wintering range Bar-tailed Godwits Limosa lapponica lapponica selected polychaete worms and especially Ragworms Hediste diversicolor, with differences between areas due to variations in prey availability.Aims To determine the diet of Bar-tailed Godwits across their winter

  15. Incremental bus service design: combining limited-stop and local bus services

    OpenAIRE

    Chiraphadhanakul, Virot; Barnhart, Cynthia

    2013-01-01

    Long in-vehicle travel times resulting from frequent stops make bus service an unattractive choice for many commuters. Limited-stop bus services however have the advantage of shorter in-vehicle times experienced by passengers. In this work, we seek to modify a given bus service by optimally reassigning some number of bus trips, as opposed to providing additional trips, to operate a limited-stop service. We propose an optimization model to determine a limited-stop service route to be operated ...

  16. BUS 599 STRAYER Course Tutorial/TutorialRank

    OpenAIRE

    alfonos

    2015-01-01

    For more course tutorials visit www.tutorialrank.com Tutorial Purchased: 4 Times, Rating: A+ STRAYER BUS 599 Week 1 Assignment Crafting and Executing Strategy Case JetBlue Airways STRAYER BUS 599 Week 2 Assignment Competitive Forces and SWOT Analysis Case Whole Foods Market STRAYER BUS 599 Week 3 Assignment Foreign Market Entry and Diversification Case Corona Beer STRAYER BUS 599 Week 4 Assignment HRM Issues Diversification Strategies Case Nucor Corporation STRAYER BUS 5...

  17. COMMUNICATION: Alternative splicing and genomic stability

    Science.gov (United States)

    Cahill, Kevin

    2004-06-01

    Alternative splicing allows an organism to make different proteins in different cells at different times, all from the same gene. In a cell that uses alternative splicing, the total length of all the exons is much shorter than in a cell that encodes the same set of proteins without alternative splicing. This economical use of exons makes genes more stable during reproduction and development because a genome with a shorter exon length is more resistant to harmful mutations. Genomic stability may be the reason why higher vertebrates splice alternatively. For a broad class of alternatively spliced genes, a formula is given for the increase in their stability.

  18. The high speed bus technology development program

    Science.gov (United States)

    Ludvigson, M. T.; Modrow, M. B.; Goldman, P. C.

    The current development status of a high-speed data bus to link MIL-STD-1750A computers in avionics applications is reviewed and illustrated with diagrams and photographs. The bus requirements include data rate 50 Mb/s, a linear token-passing scheme permitting both electronic and fiber-optic implementation, up to 64-terminal capacity, maximum terminal separation 300 ft, latency control via token-rotation-timer priority, self-test and bus-loop test capability, and automatic clock synchronization. The design concept and performance of a breadboard wire bus tested in July 1986 are discussed in detail, with particular attention to the redundancy manager, the output controller, the input controller, the ringmaster topology manager, and typical initial-placement problems.

  19. DESIGN AND EXPERIMENT OF ELECTRIC BUS

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Performance and reliability experiments on BJD-6100EV electric buses, jointly developed by Beijing Institute of Technology and Beijing Public Transport Company, are introduced. Output power model of battery pack is established and maximum output power is analyzed. A permanent magnetic direct current (PMDC) motor with enhanced windings is developed for the bus. Torque-speed characteristics of the motor are modeled and performance of electric bus is analyzed. Computational method of the range of electric bus is proposed and discussed. Experiments show that electric bus can realize design requirements. Computational methods are verified with the help of field test. It is expected that design and computation method will provide helpful reference to development of electric vehicles.

  20. GC content around splice sites affects splicing through pre-mRNA secondary structures

    Directory of Open Access Journals (Sweden)

    Chen Liang

    2011-01-01

    Full Text Available Abstract Background Alternative splicing increases protein diversity by generating multiple transcript isoforms from a single gene through different combinations of exons or through different selections of splice sites. It has been reported that RNA secondary structures are involved in alternative splicing. Here we perform a genomic study of RNA secondary structures around splice sites in humans (Homo sapiens, mice (Mus musculus, fruit flies (Drosophila melanogaster, and nematodes (Caenorhabditis elegans to further investigate this phenomenon. Results We observe that GC content around splice sites is closely associated with the splice site usage in multiple species. RNA secondary structure is the possible explanation, because the structural stability difference among alternative splice sites, constitutive splice sites, and skipped splice sites can be explained by the GC content difference. Alternative splice sites tend to be GC-enriched and exhibit more stable RNA secondary structures in all of the considered species. In humans and mice, splice sites of first exons and long exons tend to be GC-enriched and hence form more stable structures, indicating the special role of RNA secondary structures in promoter proximal splicing events and the splicing of long exons. In addition, GC-enriched exon-intron junctions tend to be overrepresented in tissue-specific alternative splice sites, indicating the functional consequence of the GC effect. Compared with regions far from splice sites and decoy splice sites, real splice sites are GC-enriched. We also found that the GC-content effect is much stronger than the nucleotide-order effect to form stable secondary structures. Conclusion All of these results indicate that GC content is related to splice site usage and it may mediate the splicing process through RNA secondary structures.

  1. The RNA Splicing Response to DNA Damage.

    Science.gov (United States)

    Shkreta, Lulzim; Chabot, Benoit

    2015-10-29

    The number of factors known to participate in the DNA damage response (DDR) has expanded considerably in recent years to include splicing and alternative splicing factors. While the binding of splicing proteins and ribonucleoprotein complexes to nascent transcripts prevents genomic instability by deterring the formation of RNA/DNA duplexes, splicing factors are also recruited to, or removed from, sites of DNA damage. The first steps of the DDR promote the post-translational modification of splicing factors to affect their localization and activity, while more downstream DDR events alter their expression. Although descriptions of molecular mechanisms remain limited, an emerging trend is that DNA damage disrupts the coupling of constitutive and alternative splicing with the transcription of genes involved in DNA repair, cell-cycle control and apoptosis. A better understanding of how changes in splice site selection are integrated into the DDR may provide new avenues to combat cancer and delay aging.

  2. Titin Diversity—Alternative Splicing Gone Wild

    Directory of Open Access Journals (Sweden)

    Wei Guo

    2010-01-01

    Full Text Available Titin is an extremely large protein found in highest concentrations in heart and skeletal muscle. The single mammalian gene is expressed in multiple isoforms as a result of alternative splicing. Although titin isoform expression is controlled developmentally and in a tissue specific manner, the vast number of potential splicing pathways far exceeds those described in any other alternatively spliced gene. Over 1 million human splice pathways for a single individual can be potentially derived from the PEVK region alone. A new splicing pattern for the human cardiac N2BA isoform type has been found in which the PEVK region includes only the N2B type exons. The alterations in splicing and titin isoform expression in human heart disease provide impetus for future detailed study of the splicing mechanisms for this giant protein.

  3. Systems evaluation of thermal bus concepts

    Science.gov (United States)

    Stalmach, D. D.

    1982-01-01

    Thermal bus concepts, to provide a centralized thermal utility for large, multihundred kilowatt space platforms, were studied and the results are summarized. Concepts were generated, defined, and screened for inclusion in system level thermal bus trades. Parametric trade studies were conducted in order to define the operational envelope, performance, and physical characteristics of each. Two concepts were selected as offering the most promise for thermal bus development. All of four concepts involved two phase flow in order to meet the required isothermal nature of the thermal bus. Two of the concepts employ a mechanical means to circulate the working fluid, a liquid pump in one case and a vapor compressor in another. Another concept utilizes direct osmosis as the driving force of the thermal bus. The fourth concept was a high capacity monogroove heat pipe. After preliminary sizing and screening, three of these concepts were selected to carry into the trade studies. The monogroove heat pipe concept was deemed unsuitable for further consideration because of its heat transport limitations. One additional concept utilizing capillary forces to drive the working fluid was added. Parametric system level trade studies were performed. Sizing and weight calculations were performed for thermal bus sizes ranging from 5 to 350 kW and operating temperatures in the range of 4 to 120 C. System level considerations such as heat rejection and electrical power penalties and interface temperature losses were included in the weight calculations.

  4. Experimental determinations of the eigenmodes for composite bars made with carbon and Kevlar-carbon fibers

    Science.gov (United States)

    Miriţoiu, C. M.; Stănescu, M. M.; Burada, C. O.; Bolcu, D.; Roşca, V.

    2015-11-01

    For modal identification, the single-point excitation method has been widely used in modal tests and it consists in applying a force in a given point and recording the vibratory structure response in all interest points, including the excitation point. There will be presented the experimental recordings for the studied bars (with Kevlar-carbon or carbon fibers), the frequency response function in Cartesian and polar coordinates. By using the frequency response functions we determine the eigenparameters for each bar. We present the final panel of the eigenmodes (with the damping factors, eigenfrequencies and critical damping) for each considered bar. Using the eigenfrequency of the first determined eigenmode, the bars stiffness has been determined. The presented bars can be used in practical engineering for: car or bus body parts, planes body parts, bullet-proof vests, reinforcements for sandwich beams, and so on.

  5. Spliced leader RNA trans-splicing discovered in copepods

    Science.gov (United States)

    Yang, Feifei; Xu, Donghui; Zhuang, Yunyun; Yi, Xiaoyan; Huang, Yousong; Chen, Hongju; Lin, Senjie; Campbell, David A.; Sturm, Nancy R.; Liu, Guangxing; Zhang, Huan

    2015-12-01

    Copepods are one of the most abundant metazoans in the marine ecosystem, constituting a critical link in aquatic food webs and contributing significantly to the global carbon budget, yet molecular mechanisms of their gene expression are not well understood. Here we report the detection of spliced leader (SL) trans-splicing in calanoid copepods. We have examined nine species of wild-caught copepods from Jiaozhou Bay, China that represent the major families of the calanoids. All these species contained a common 46-nt SL (CopepodSL). We further determined the size of CopepodSL precursor RNA (slRNA; 108-158 nt) through genomic analysis and 3‧-RACE technique, which was confirmed by RNA blot analysis. Structure modeling showed that the copepod slRNA folded into typical slRNA secondary structures. Using a CopepodSL-based primer set, we selectively enriched and sequenced copepod full-length cDNAs, which led to the characterization of copepod transcripts and the cataloging of the complete set of 79 eukaryotic cytoplasmic ribosomal proteins (cRPs) for a single copepod species. We uncovered the SL trans-splicing in copepod natural populations, and demonstrated that CopepodSL was a sensitive and specific tool for copepod transcriptomic studies at both the individual and population levels and that it would be useful for metatranscriptomic analysis of copepods.

  6. Dynamic Bus Travel Time Prediction Models on Road with Multiple Bus Routes.

    Science.gov (United States)

    Bai, Cong; Peng, Zhong-Ren; Lu, Qing-Chang; Sun, Jian

    2015-01-01

    Accurate and real-time travel time information for buses can help passengers better plan their trips and minimize waiting times. A dynamic travel time prediction model for buses addressing the cases on road with multiple bus routes is proposed in this paper, based on support vector machines (SVMs) and Kalman filtering-based algorithm. In the proposed model, the well-trained SVM model predicts the baseline bus travel times from the historical bus trip data; the Kalman filtering-based dynamic algorithm can adjust bus travel times with the latest bus operation information and the estimated baseline travel times. The performance of the proposed dynamic model is validated with the real-world data on road with multiple bus routes in Shenzhen, China. The results show that the proposed dynamic model is feasible and applicable for bus travel time prediction and has the best prediction performance among all the five models proposed in the study in terms of prediction accuracy on road with multiple bus routes.

  7. Sexual Harassment on the School Bus: Supporting and Preparing Bus Drivers to Respond Appropriately

    Science.gov (United States)

    Allen, Melissa; Young, Ellie L.; Ashbaker, Betty Y.; Heaton, Emily; Parkinson, Marisa

    2003-01-01

    Sexual harassment is commonplace in schools, particularly among adolescents. Although information on this topic is typically gathered from students and teachers, this study collected information from school bus drivers. Based on feedback from 58 school bus drivers, 39 (67%) reported observing students making sexual comments or jokes. Almost half…

  8. Bullying and Aggression on the School Bus: School Bus Drivers' Observations and Suggestions

    Science.gov (United States)

    deLara, Ellen

    2008-01-01

    Every school day bus drivers are responsible for transporting children safely over many miles, yet they are rarely polled for their opinions or contributions to school safety. School bus drivers are in a unique position to inform the discussion on aggressive behavior during the school day. This exploratory study collected information from school…

  9. Harmonizing the reinforcement development and splice length for next gen nuclear construction

    International Nuclear Information System (INIS)

    In nuclear power plant construction, both Safety-Related and Non-Safety-Related structures are present. Safety-Related RC structures will generally include Concrete Containment and other Category I (CAT I) structures. The reinforcement development/splice length for reinforcement in containment structures is provided according to ASME SECTION III Div 2 (ACI 359-07) Code. The development and splice length requirements for other Safety-Related CAT I RC Structures are given in ACI 349-06, Code requirements for Nuclear Safety-Related Concrete Structures. The development and splice length requirements for Non-Safety structures are given in ACI 318-08. Unfortunately, the requirements in the three Codes (ACI 359, ACI 349 and ACI 318) are not the same and can vary significantly. This results, for example, in the same bar size requiring different development/splice lengths for different structures which is extra work for the fabricator and also increases the potential for confusion/mix up at a particular job site. This evaluates and discusses the differences in development and splice length requirements in the above-mentioned Codes for CAT I and Non-Safety-Related structures and explores opportunities for harmonization of requirements among the three Codes, where possible and appropriate. The development and splice length requirement for higher grade reinforcement (Gr 75 and Gr 80), which are expected to be allowed in the next editions of the US nuclear codes will also be discussed. Based on this study, some recommendations are made to streamline the development/splice requirements to help improve construction of New Gen nuclear construction

  10. Sports Season, Sports Bars

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    @@ For foreigners in Beijing, the sports bar is a special place, a place to gather for watching matches and a place to feel the familiarity of home, while for some sports enthusiasts it serves as their second home.

  11. The bar instability revisited

    OpenAIRE

    Chiodi, Filippo; Andreotti, Bruno; Claudin, Philippe

    2012-01-01

    The river bar instability is revisited, using a hydrodynamical model based on Reynolds averaged Navier-Stokes equations. The results are contrasted with the standard analysis based on shallow water Saint-Venant equations. We first show that the stability of both transverse modes (ripples) and of small wavelength inclined modes (bars) predicted by the Saint-Venant approach are artefacts of this hydrodynamical approximation. When using a more reliable hydrodynamical model, the dispersion relati...

  12. Designing Bus Structure for Digital Controller of Nuclear Power Plant

    International Nuclear Information System (INIS)

    In this paper, the bus structure design for the digital controller of Nuclear Power Plant (NPP) is proposed. The most important portion is the bus in the digital controller. A bus is responsible for transmission data among the various Input/Output (I/O) board, Processor board and Communication board. An existing bus is a parallel bus structure such as the VERSA Module Euro (VME) bus and an extended Static Random Access Memory (SRAM) Controller. Central Processing Unit (CPU) processing speed and communication speed is faster than before, but the parallel bus has a speed limit. Because it is the physically lines shared and the weakness about reflected wave. That is, use of the parallel bus has been the cause of the performance degradation of system. To solve the parallel bus problem, the bus has been developed by serial. The configuration of transceiver logic was simplified by not share the bus that all boards and processor boards was connected to the point-to-point. Serial bus was configured using physically Low Voltage Differential Signaling (LVDS). The speed limit of bus was broken by the LVDS what is consisted of a strong against the reflected-wave of signal, noise and etc. Each channel of bus has a different speed mode and is able to set a required transmission way. Different transmission ways of each channel are able to transmit data to match the required response time of system. The LVDS speed has about basically 1Gbps but the bus was composed with less than 50Mbps considering the environmental characteristics of nuclear. It was shown that the configuration of the serial bus was the performance and the reliability more improving than parallel bus

  13. Linking splicing to Pol II transcription stabilizes pre-mRNAs and influences splicing patterns.

    OpenAIRE

    Hicks, Martin J; Chin-Rang Yang; Matthew V Kotlajich; Hertel, Klemens J.

    2006-01-01

    RNA processing is carried out in close proximity to the site of transcription, suggesting a regulatory link between transcription and pre-mRNA splicing. Using an in vitro transcription/splicing assay, we demonstrate that an association of RNA polymerase II ( Pol II) transcription and pre-mRNA splicing is required for efficient gene expression. Pol II-synthesized RNAs containing functional splice sites are protected from nuclear degradation, presumably because the local concentration of the sp...

  14. Control of Alternative Splicing by Signal-dependent Degradation of Splicing-regulatory Proteins*S⃞

    OpenAIRE

    Katzenberger, Rebeccah J.; Marengo, Matthew S.; Wassarman, David A.

    2009-01-01

    Alternative pre-mRNA splicing is a major gene expression regulatory mechanism in metazoan organisms. Proteins that bind pre-mRNA elements and control assembly of splicing complexes regulate utilization of pre-mRNA alternative splice sites. To understand how signaling pathways impact this mechanism, an RNA interference screen in Drosophila S2 cells was used to identify proteins that regulate TAF1 (TBP-associated factor 1) alternative splicing in response to activation o...

  15. Competition between Pre-mRNAs for the splicing machinery drives global regulation of splicing

    OpenAIRE

    Munding, EM; Shiue, L; Katzman, S.; Donohue, J; Ares, M

    2013-01-01

    During meiosis in yeast, global splicing efficiency increases and then decreases. Here we provide evidence that splicing improves due to reduced competition for the splicing machinery. The timing of this regulation corresponds to repression and reactivation of ribosomal protein genes (RPGs) during meiosis. In vegetative cells, RPG repression by rapamycin treatment also increases splicing efficiency. Downregulation of the RPG-dedicated transcription factor gene IFH1 genetically suppresses two ...

  16. Regulation of Splicing Factors by Alternative Splicing and NMD Is Conserved between Kingdoms Yet Evolutionarily Flexible

    OpenAIRE

    Liana F Lareau; Brenner, Steven E.

    2015-01-01

    Ultraconserved elements, unusually long regions of perfect sequence identity, are found in genes encoding numerous RNA-binding proteins including arginine-serine rich (SR) splicing factors. Expression of these genes is regulated via alternative splicing of the ultraconserved regions to yield mRNAs that are degraded by nonsense-mediated mRNA decay (NMD), a process termed unproductive splicing (Lareau et al. 2007; Ni et al. 2007). As all human SR genes are affected by alternative splicing and N...

  17. Alternative Spliced Transcripts as Cancer Markers

    Directory of Open Access Journals (Sweden)

    Otavia L. Caballero

    2001-01-01

    Full Text Available Eukaryotic mRNAs are transcribed as precursors containing their intronic sequences. These are subsequently excised and the exons are spliced together to form mature mRNAs. This process can lead to transcript diversification through the phenomenon of alternative splicing. Alternative splicing can take the form of one or more skipped exons, variable position of intron splicing or intron retention. The effect of alternative splicing in expanding protein repertoire might partially underlie the apparent discrepancy between gene number and the complexity of higher eukaryotes. It is likely that more than 50% form. Many cancer-associated genes, such as CD44 and WT1 are alternatively spliced. Variation of the splicing process occurs during tumor progression and may play a major role in tumorigenesis. Furthermore, alternatively spliced transcripts may be extremely useful as cancer markers, since it appears likely that there may be striking contrasts in usage of alternatively spliced transcript variants between normal and tumor tissue than in alterations in the general levels of gene expression.

  18. The low information content of Neurospora splicing signals: implications for RNA splicing and intron origin.

    Science.gov (United States)

    Collins, Richard A; Stajich, Jason E; Field, Deborah J; Olive, Joan E; DeAbreu, Diane M

    2015-05-01

    When we expressed a small (0.9 kb) nonprotein-coding transcript derived from the mitochondrial VS plasmid in the nucleus of Neurospora we found that it was efficiently spliced at one or more of eight 5' splice sites and ten 3' splice sites, which are present apparently by chance in the sequence. Further experimental and bioinformatic analyses of other mitochondrial plasmids, random sequences, and natural nuclear genes in Neurospora and other fungi indicate that fungal spliceosomes recognize a wide range of 5' splice site and branchpoint sequences and predict introns to be present at high frequency in random sequence. In contrast, analysis of intronless fungal nuclear genes indicates that branchpoint, 5' splice site and 3' splice site consensus sequences are underrepresented compared with random sequences. This underrepresentation of splicing signals is sufficient to deplete the nuclear genome of splice sites at locations that do not comprise biologically relevant introns. Thus, the splicing machinery can recognize a wide range of splicing signal sequences, but splicing still occurs with great accuracy, not because the splicing machinery distinguishes correct from incorrect introns, but because incorrect introns are substantially depleted from the genome.

  19. Statistical Analysis of Bus Networks in India

    CERN Document Server

    Chatterjee, Atanu; Ramadurai, Gitakrishnan

    2015-01-01

    Through the past decade the field of network science has established itself as a common ground for the cross-fertilization of exciting inter-disciplinary studies which has motivated researchers to model almost every physical system as an interacting network consisting of nodes and links. Although public transport networks such as airline and railway networks have been extensively studied, the status of bus networks still remains in obscurity. In developing countries like India, where bus networks play an important role in day-to-day commutation, it is of significant interest to analyze its topological structure and answer some of the basic questions on its evolution, growth, robustness and resiliency. In this paper, we model the bus networks of major Indian cities as graphs in \\textit{L}-space, and evaluate their various statistical properties using concepts from network science. Our analysis reveals a wide spectrum of network topology with the common underlying feature of small-world property. We observe tha...

  20. High speed data bus design validation

    Science.gov (United States)

    Stevens, Rick

    The SAE Linear Implementation Task Group has developed the SAE Linear Token Passing Multiplex Data Bus Standard (AS4074.1) and is currently working on a validation plan. This validation plan will define the test requirements for determining that an implementation of the standard meets the requirements of SAE AS4074.1. Once completed, the test requirements contained in this plan will be executed on bus interface units (BIUs) for validation purposes. In the present work, the author describes the use of a validation model that incorporates many of the capabilities of the validation test plan. This model can also be thought of as a VHDL (VHSIC Hardware Description Language) behavioral representation of the SAE Linear Token Passing Multiplex Data Bus Standard. It is tightly coupled to the standard and provides a model that can be used during the BIU development to validate the design.

  1. Risk factors affecting fatal bus accident severity: Their impact on different types of bus drivers.

    Science.gov (United States)

    Feng, Shumin; Li, Zhenning; Ci, Yusheng; Zhang, Guohui

    2016-01-01

    While the bus is generally considered to be a relatively safe means of transportation, the property losses and casualties caused by bus accidents, especially fatal ones, are far from negligible. The reasons for a driver to incur fatalities are different in each case, and it is essential to discover the underlying risk factors of bus fatality severity for different types of drivers in order to improve bus safety. The current study investigates the underlying risk factors of fatal bus accident severity to different types of drivers in the U.S. by estimating an ordered logistic model. Data for the analysis are retrieved from the Buses Involved in Fatal Accidents (BIFA) database from the USA for the years 2006-2010. Accidents are divided into three levels by counting their equivalent fatalities, and the drivers are classified into three clusters by the K-means cluster analysis. The analysis shows that some risk factors have the same impact on different types of drivers, they are: (a) season; (b) day of week; (c) time period; (d) number of vehicles involved; (e) land use; (f) manner of collision; (g) speed limit; (h) snow or ice surface condition; (i) school bus; (j) bus type and seating capacity; (k) driver's age; (l) driver's gender; (m) risky behaviors; and (n) restraint system. Results also show that some risk factors only have impact on the "young and elder drivers with history of traffic violations", they are: (a) section type; (b) number of lanes per direction; (c) roadway profile; (d) wet road surface; and (e) cyclist-bus accident. Notably, history of traffic violations has different impact on different types of bus drivers. PMID:26513334

  2. Design of E-City Bus Tracking System

    Directory of Open Access Journals (Sweden)

    Shekhar Shinde

    2014-04-01

    Full Text Available E-city bus tracking system will serve as a viable notification system that will effectively assist passengers in making the decision of whether to wait for the bus or not. This system is a standalone system designed to display the real-time location(s of the buses with the use of GSM module technology. The system will consist of an IR transmitter module installed on the buses, receiver boards installed on the bus stops and GSM receiver connected with PC monitoring the whole arrangement. It will also have passenger information system software installed at the bus stops and which will provide user the relevant information regarding all the bus numbers going for his source to destination along with the route details. It will also transmit its bus numbers and route names, with the help of LED transmitter, continuously as soon as the bus comes within the range of the receiver at the bus stop.

  3. The Bus Station Spacing Optimization Based on Game Theory

    Directory of Open Access Journals (Sweden)

    Changjiang Zheng

    2015-01-01

    Full Text Available With the development of city, the problem of traffic is becoming more and more serious. Developing public transportation has become the key to solving this problem in all countries. Based on the existing public transit network, how to improve the bus operation efficiency, and reduce the residents transit trip cost has become a simple and effective way to develop the public transportation. Bus stop spacing is an important factor affecting passengers’ travel time. How to set up bus stop spacing has become the key to reducing passengers’ travel time. According to comprehensive traffic survey, theoretical analysis, and summary of urban public transport characteristics, this paper analyzes the impact of bus stop spacing on passenger in-bus time cost and out-bus time cost and establishes in-bus time and out-bus time model. Finally, the paper gets the balance best station spacing by introducing the game theory.

  4. Secure Bus-Ticketing System using NFC

    Directory of Open Access Journals (Sweden)

    Monalisa Lopes

    2015-04-01

    Full Text Available For making the day to day life more convenient for the passengers travelling in bus some technologies can be used like Near Field Communication (NFC, Radio Frequency Identification (RFID. The proposed system is based on ticketing and identification of passengers in public transport. The system suggest a user friendly automated ticketing system which will automatically deduct the passengers fare according to the distance travelled as well as detect the passengers detail information. The system also helps to calculate the total revenue of a single bus in a day. Another important aspect is reusability, which helps use ticket multiple times as it is rechargeable.

  5. NOC AND BUS ARCHITECTURE: A COMPARISON

    Directory of Open Access Journals (Sweden)

    RAJEEV KAMAL

    2012-04-01

    Full Text Available Network-on-chip designs promise to offer considerable advantages over the traditional bus-based architecture. As continuing scaling of Moore’s law enables ever greater transistor densities, design complexity, power limitations and application convergence networks have started to replace busses in much smaller systems and the enhancement of NoC. This paper summarizes the advantages of the NoC and the limitations of traditional bus based architecture. In this paper we discuss a detailed comparison of area, power, scalability andperformance of traditional busses in comparison with NoC.

  6. An Efficient Segmental Bus-Invert Coding Method for Instruction Memory Data Bus Switching Reduction

    Directory of Open Access Journals (Sweden)

    Gu Ji

    2009-01-01

    Full Text Available Abstract This paper presents a bus coding methodology for the instruction memory data bus switching reduction. Compared to the existing state-of-the-art multiway partial bus-invert (MPBI coding which relies on data bit correlation, our approach is very effective in reducing the switching activity of the instruction data buses, since little bit correlation can be observed in the instruction data. Our experiments demonstrate that the proposed encoding can reduce up to 42% of switching activity, with an average of 30% reduction, while MPBI achieves just 17.6% reduction in switching activity.

  7. Air quality on bus routes in Umea, Sweden

    Energy Technology Data Exchange (ETDEWEB)

    Sandberg, H.; Forsberg, B. [Dept. of Environmental Health and Dept. of Public Health and Clinical Medicine, Umea University SE, Umea (Sweden)

    2000-07-01

    Bus traffic in some local streets with up to 650 buses per day has resulted in complaints about air pollution and suggestions from residents that the bus routes should be changed to other streets. We have studied nitrogen dioxide and benzene concentrations at five exposed sites and at two representative control sites without bus traffic, and found no general differences in air quality. However, the site and temperature adjusted concentrations fell significantly during a strike among bus drivers. (authors)

  8. Framework for Bus Rapid Transit Development and Deployment Planning

    OpenAIRE

    Miller, Mark A.; Yin, Yafeng; Balvanyos, Tunde; Ceder, Avishai

    2004-01-01

    This report presents the results of its investigation into deployment planning for bus rapid transit systems. In this study, we conducted a macro-scale examination of bus rapid transit systems from technical, operational, institutional, and planning perspectives. We then developed the theoretical foundation for a deployment planning framework for bus rapid transit systems that specifically takes into account the unique features of bus rapid transit that differ from other transit alternatives....

  9. Alternative mRNA Splicing: Control by Combination

    OpenAIRE

    Mabon, Stephen A; Tom Misteli

    2005-01-01

    Alternative splicing in mammalian cells has been suggested to be largely controlled by combinatorial binding of basal splicing factors to pre-mRNA templates. This model predicts that distinct sets of pre-mRNA splicing factors are associated with alternatively spliced transcripts. However, no experimental evidence for differential recruitment of splicing factors to transcripts with distinct splicing fates is available. Here we have used quantitative single-cell imaging to test this key predict...

  10. Large-scale comparative analysis of splicing signals and their corresponding splicing factors in eukaryotes

    OpenAIRE

    Schwartz, Schraga; Silva, João(CFTP, Departamento de Física, Instituto Superior Técnico, Universidade de Lisboa, Avenida Rovisco Pais 1, 1049, Lisboa, Portugal); Burstein, David; Pupko, Tal; Eyras, Eduardo; Ast, Gil

    2008-01-01

    Introns are among the hallmarks of eukaryotic genes. Splicing of introns is directed by three main splicing signals: the 5′ splice site (5′ss), the branch site (BS), and the polypyrimdine tract/3′splice site (PPT-3′ss). To study the evolution of these splicing signals, we have conducted a systematic comparative analysis of these signals in over 1.2 million introns from 22 eukaryotes. Our analyses suggest that all these signals have dramatically evolved: The PPT is weak among most fungi, inter...

  11. Bus Stops, This shapefile contains existing bus stops for Charlotte Area Transit System, Published in 2006, Charlotte Area Transit System.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Bus Stops dataset, was produced all or in part from Field Survey/GPS information as of 2006. It is described as 'This shapefile contains existing bus stops for...

  12. Peptic ulcer among urban bus drivers in Denmark

    DEFF Research Database (Denmark)

    Netterstrøm, Bo; Juel, K

    1990-01-01

    As part of a survey on the work environment of bus drivers, 2045 (83%) of 2465 male bus drivers in the three major cities in Denmark in 1978 answered a postal questionnaire on health and working conditions. In order to evaluate the relative occurrence of peptic ulcer among the bus drivers, a follow...

  13. Aberrant RNA splicing in cancer; expression changes and driver mutations of splicing factor genes.

    Science.gov (United States)

    Sveen, A; Kilpinen, S; Ruusulehto, A; Lothe, R A; Skotheim, R I

    2016-05-12

    Alternative splicing is a widespread process contributing to structural transcript variation and proteome diversity. In cancer, the splicing process is commonly disrupted, resulting in both functional and non-functional end-products. Cancer-specific splicing events are known to contribute to disease progression; however, the dysregulated splicing patterns found on a genome-wide scale have until recently been less well-studied. In this review, we provide an overview of aberrant RNA splicing and its regulation in cancer. We then focus on the executors of the splicing process. Based on a comprehensive catalog of splicing factor encoding genes and analyses of available gene expression and somatic mutation data, we identify cancer-associated patterns of dysregulation. Splicing factor genes are shown to be significantly differentially expressed between cancer and corresponding normal samples, and to have reduced inter-individual expression variation in cancer. Furthermore, we identify enrichment of predicted cancer-critical genes among the splicing factors. In addition to previously described oncogenic splicing factor genes, we propose 24 novel cancer-critical splicing factors predicted from somatic mutations.

  14. Aberrant RNA splicing in cancer; expression changes and driver mutations of splicing factor genes.

    Science.gov (United States)

    Sveen, A; Kilpinen, S; Ruusulehto, A; Lothe, R A; Skotheim, R I

    2016-05-12

    Alternative splicing is a widespread process contributing to structural transcript variation and proteome diversity. In cancer, the splicing process is commonly disrupted, resulting in both functional and non-functional end-products. Cancer-specific splicing events are known to contribute to disease progression; however, the dysregulated splicing patterns found on a genome-wide scale have until recently been less well-studied. In this review, we provide an overview of aberrant RNA splicing and its regulation in cancer. We then focus on the executors of the splicing process. Based on a comprehensive catalog of splicing factor encoding genes and analyses of available gene expression and somatic mutation data, we identify cancer-associated patterns of dysregulation. Splicing factor genes are shown to be significantly differentially expressed between cancer and corresponding normal samples, and to have reduced inter-individual expression variation in cancer. Furthermore, we identify enrichment of predicted cancer-critical genes among the splicing factors. In addition to previously described oncogenic splicing factor genes, we propose 24 novel cancer-critical splicing factors predicted from somatic mutations. PMID:26300000

  15. An appraisal of QR code use to deliver bus arrival time information at bus stops in Southampton

    OpenAIRE

    Gammer, Nick

    2011-01-01

    The provision of at-stop bus arrival time information has numerous potential benefits to bus users. With real-time passenger information well established in the UK the challenge is relaying accurate bus arrival times to passengers in a cost effective manner. Display screens are costly to install and maintain, rendering placement at all bus stops economically undesirable. QR codes represent an inexpensive alternative to delivering this information, usually at zero marginal cost to users. Q...

  16. FUEL CELL BUS DEMONSTRATION IN MEXICO CITY

    Science.gov (United States)

    The report discusses the performance of a cull-size, zero-emission, Proton Exchange Membrane (PEM) fuel-cell-powered transit bus in the atmospheric environment of Mexico City. To address the air quality problems caused by vehicle emissions in Mexico City, a seminar on clean vehic...

  17. Inrush-Current Limiter And Bus Isolator

    Science.gov (United States)

    Dolland, Carlisle R.

    1994-01-01

    Electronic circuit protects electrical power bus and source of power against excessive current demands. Circuit intended for use with power-consuming electronic system drawing pulsed currents and including capacitor bank as low-impedance secondary source from which pulsed currents drawn.

  18. Repeater For A Digital-Communication Bus

    Science.gov (United States)

    Torres-Guzman, Esteban; Olson, Stephen; Heaps, Tim

    1993-01-01

    Digital repeater circuit designed to extend range of communication on MIL-STD-1553 bus beyond original maximum allowable length of 300 ft. Circuit provides two-way communication, one way at time, and conforms to specifications of MIL-STD-1553. Crosstalk and instability eliminated.

  19. Virginia School Bus Driver Training: Does Training Program Adequacy Affect school Bus Accident Rates?

    OpenAIRE

    Crews, James O

    1997-01-01

    Analysis of data provided by the Virginia Departments of Motor Vehicles, Transportation, and Education all show school buses as having a significantly higher number of accidents per hundred million miles of travel than other forms of transportation. Such statistics are alarming and formal study of school bus accident factors has been limited. The purposes of this study were to (a) establish the adequacy of the school bus driver training programs of Local Education Agencies(LEAs...

  20. Bus 54 -- Where are you? A school bus intelligent information system

    Energy Technology Data Exchange (ETDEWEB)

    Truett, L.F.; Moore, S.; Tonn, B. [Oak Ridge National Lab., TN (United States); Conley, T. [GTE Wireless, Nashville, TN (United States)

    1998-07-01

    Although major accidents involving school buses are rare (only about 0.3% of all fatal crashes since 1986 are classified as school-bus-related), even minor accidents and breakdowns cause a great deal of parental anxiety. The objective of this research is to design an efficient, cost-effective, accurate, and secure system that will track individual school buses and communicate appropriate information to the school system`s central administration unit, to the school transportation administrator, and to parents of children on the bus. The greatest benefit of the proposed information system is that parents and officials can always know the location and condition (these conditions would vary depending on the needs of a particular school system) of the school buses. In case of an accident or mechanical problem, when emergency crews are needed, they can be dispatched almost immediately with a good understanding of the problem and the exact location of the bus. In addition to being able to track the bus while the child is on board, parents will be able to determine the location of their child`s bus prior to its arrival in the morning in order to prevent the child from needing to wait outside in inclement weather. The information available to parents can also be expanded to include maps of limited routes (e.g., snow routes). Basically, the Bus 54 concept consists of a bus component and a central data processing unit. Each bus will be outfitted with a global positioning satellite (GPS) device, a wireless communication device, and wireless data communication service. The central data processing unit will receive and process information from the buses and provide information access to parents and officials via an Internet link.

  1. The Characterizations of Different Splicing Systems

    Science.gov (United States)

    Karimi, Fariba; Sarmin, Nor Haniza; Heng, Fong Wan

    The concept of splicing system was first introduced by Head in 1987 to model the biological process of DNA recombination mathematically. This model was made on the basis of formal language theory which is a branch of applied discrete mathematics and theoretical computer science. In fact, splicing system treats DNA molecule and the recombinant behavior by restriction enzymes and ligases in the form of words and splicing rules respectively. The notion of splicing systems was taken into account from different points of view by many mathematicians. Several modified definitions have been introduced by many researchers. In this paper, some properties of different kinds of splicing systems are presented and their relationships are investigated. Furthermore, these results are illustrated by some examples.

  2. Raising the Bar (3)

    NARCIS (Netherlands)

    Elhorst, P.; Abreu, M.; Amaral, P.; Bhattacharjee, A.; Corrado, L.; Fingleton, B.; Fuerst, F.; Garretsen, H.; Igliori, D.; Le Gallo, J.; McCann, P.; Monastiriotis, V.; Pryce, G.; Yu, J.

    2016-01-01

    This editorial summarizes and comments on the papers published in issue 11(3) so as to raise the bar in applied spatial economic research and highlight new trends. The first paper proposes spatial and a-spatial indicators to describe the networks of airline companies around the world. The second pap

  3. The IPG BAR project

    NARCIS (Netherlands)

    Mentink, B.; Henriquez, L.; Van Niekerk, L.; Verheul, R.

    2013-01-01

    The booklets 'Making Patterns' and 'Using Patterns' describe two aspects of the the pattern method within the urban design process. The accompanying IPG BAR Pattern Library is a small pattern library of urban-airport symbiosis patterns. These documents are the result of the Interdisciplinary Projec

  4. Highest Oxygen Bar

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    The world’s highest altitude Lhalu Wetland in Tibet is rebounding from past environmental damage In Lhasa, where the oxygen content is just 60 percent of that of the plain area, a place known as the "natural oxygen bar"is highly prized by residents.

  5. Raising the bar (2)

    NARCIS (Netherlands)

    Elhorst, P.; Abreu, M.; Amaral, P.; Bhattacharjee, A.; Corrado, L.; Fingleton, B.; Fuerst, F.; Garretsen, H.; Igliori, D.; Le Gallo, J.; McCann, P.; Monastiriotis, V.; Pryce, G.; Yu, J.

    2016-01-01

    In this editorial we summarise and comment on the papers published in issue 11.2 so as to raise the bar in applied spatial economic research and highlight new trends. The first paper analyses which regions in Europe were resilient to the great Recession and which ones were not. The second and the th

  6. Advanced eGovernment Information Service Bus (eGov-Bus

    Directory of Open Access Journals (Sweden)

    2007-01-01

    Full Text Available The eGov-Bus project provides citizens and businesses with improved access to virtual public services, which are based on existing national eGovernment Web services and which support cross-border life events. Requirements and specific rules of these life events are considered, and personalization of user preferences is supported. eGov-Bus is based on adaptable process management technologies, allowing for virtual services which are dynamically combined from existing national eGovernment services. In this way, a comprehensive workflow process is set up, allowing for service-level agreements, an audit trail and explanation of the process to the end user. The eGov-Bus process engine operates on top of a virtual repository, providing a high-level semantic view of information retrieved from heterogeneous information sources, such as eGovernment Web services. Further, eGov-Bus relies on a security framework to ensure all high-level security requirements are met. The eGov-Bus architecture is business oriented, it focuses on Service Oriented Architecture (SOA concepts, asynchronously combining Web services and providing a Service Bus.

  7. Regenerative polymeric bus architecture for board-level optical interconnects.

    Science.gov (United States)

    Bamiedakis, N; Hashim, A; Penty, R V; White, I H

    2012-05-21

    A scalable multi-channel optical regenerative bus architecture based on the use of polymer waveguides is presented for the first time. The architecture offers high-speed interconnection between electrical cards allowing regenerative bus extension with multiple segments and therefore connection of an arbitrary number of cards onto the bus. In a proof-of-principle demonstration, a 4-channel 3-card polymeric bus module is designed and fabricated on standard FR4 substrates. Low insertion losses (≤ -15 dB) and low crosstalk values (bus modules using a prototype 3R regenerator.

  8. Spliced

    DEFF Research Database (Denmark)

    Addison, Courtney Page

    2016-01-01

    Human gene therapy (HGT) aims to cure disease by inserting or editing the DNA of patients with genetic conditions. Since foundational genetic techniques came into use in the 1970s, the field has developed to the point that now three therapies have market approval, and over 1800 clinical trials have...... been initiated. In this article I present a brief history of HGT, showing how the ethical and practical viability of the field was achieved by key scientific and regulatory actors. These parties carefully articulated gene therapy’s scope, limiting it to therapeutic interventions on somatic cells......, and cultivated alliances and divisions that bolstered the field’s legitimacy. At times these measures faltered, and then practitioners and sometimes patients would invoke an ethical imperative, posing gene therapy as the best solution to life and death problems. I suggest that we consider how boundary...

  9. Energy efficiency of different bus subsystems in Belgrade public transport

    Directory of Open Access Journals (Sweden)

    Mišanović Slobodan M.

    2015-01-01

    Full Text Available Research in this paper comprised experimental determination of energy efficiency of different bus subsystems (diesel bus, trolleybus and fully electric bus on chosen public transport route in Belgrade. Experimental measuring of energy efficiency of each bus type has been done based on the analysis of parameters of vehicle driving cycles between stops. Results of this analysis were basis for development of theoretical simulation model of energy efficiency. The model was latter compared with the results of simulation done by "Solaris bus & Coach" company for the chosen electric bus route. Based on demonstrated simulation, characteristics of electric bus batteries were defined, the method and dynamic of their recharge was suggested, as well as choice for other aggregates for drive system and technical characteristics for the electric buses were suggested.

  10. Alternative splicing regulation during C. elegans development: splicing factors as regulated targets.

    Directory of Open Access Journals (Sweden)

    Sergio Barberan-Soler

    2008-02-01

    Full Text Available Alternative splicing generates protein diversity and allows for post-transcriptional gene regulation. Estimates suggest that 10% of the genes in Caenorhabditis elegans undergo alternative splicing. We constructed a splicing-sensitive microarray to detect alternative splicing for 352 cassette exons and tested for changes in alternative splicing of these genes during development. We found that the microarray data predicted that 62/352 (approximately 18% of the alternative splicing events studied show a strong change in the relative levels of the spliced isoforms (>4-fold during development. Confirmation of the microarray data by RT-PCR was obtained for 70% of randomly selected genes tested. Among the genes with the most developmentally regulated alternatively splicing was the hnRNP F/H splicing factor homolog, W02D3.11 - now named hrpf-1. For the cassette exon of hrpf-1, the inclusion isoform comprises 65% of hrpf-1 steady state messages in embryos but only 0.1% in the first larval stage. This dramatic change in the alternative splicing of an alternative splicing factor suggests a complex cascade of splicing regulation during development. We analyzed splicing in embryos from a strain with a mutation in the splicing factor sym-2, another hnRNP F/H homolog. We found that approximately half of the genes with large alternative splicing changes between the embryo and L1 stages are regulated by sym-2 in embryos. An analysis of the role of nonsense-mediated decay in regulating steady-state alternative mRNA isoforms was performed. We found that 8% of the 352 events studied have alternative isoforms whose relative steady-state levels in embryos change more than 4-fold in a nonsense-mediated decay mutant, including hrpf-1. Strikingly, 53% of these alternative splicing events that are affected by NMD in our experiment are not obvious substrates for NMD based on the presence of premature termination codons. This suggests that the targeting of splicing factors

  11. SAW: a method to identify splicing events from RNA-Seq data based on splicing fingerprints.

    Directory of Open Access Journals (Sweden)

    Kang Ning

    Full Text Available Splicing event identification is one of the most important issues in the comprehensive analysis of transcription profile. Recent development of next-generation sequencing technology has generated an extensive profile of alternative splicing. However, while many of these splicing events are between exons that are relatively close on genome sequences, reads generated by RNA-Seq are not limited to alternative splicing between close exons but occur in virtually all splicing events. In this work, a novel method, SAW, was proposed for the identification of all splicing events based on short reads from RNA-Seq. It was observed that short reads not in known gene models are actually absent words from known gene sequences. An efficient method to filter and cluster these short reads by fingerprint fragments of splicing events without aligning short reads to genome sequences was developed. Additionally, the possible splicing sites were also determined without alignment against genome sequences. A consensus sequence was then generated for each short read cluster, which was then aligned to the genome sequences. Results demonstrated that this method could identify more than 90% of the known splicing events with a very low false discovery rate, as well as accurately identify, a number of novel splicing events between distant exons.

  12. Depolarization-mediated regulation of alternative splicing

    Directory of Open Access Journals (Sweden)

    Alok eSharma

    2011-12-01

    Full Text Available Alternative splicing in eukaryotes plays an important role in regulating gene expression by selectively including alternative exons. A wealth of information has been accumulated that explains how alternative exons are selected in a developmental stage- or tissue-specific fashion. However, our knowledge of how cells respond to environmental changes to alter alternative splicing is very limited. For example, although a number of alternative exons have been shown to be regulated by calcium level alterations, the underlying mechanisms are not well understood. As calcium signaling in neurons plays a crucial role in essential neuronal functions such as learning and memory formation, it is important to understand how this process is regulated at every level in gene expression. The significance of the dynamic control of alternative splicing in response to changes of calcium levels has been largely unappreciated. In this communication, we will summarize the recent advances in calcium signaling-mediated alternative splicing that have provided some insights into the important regulatory mechanisms. In addition to describing the cis-acting RNA elements on the pre-mRNA molecules that respond to changes of intracellular calcium levels, we will summarize how splicing regulators change and affect alternative splicing in this process. We will also discuss a novel mode of calcium-mediated splicing regulation at the level of chromatin structure and transcription.

  13. Dark Matter Trapping by Stellar Bars: The Shadow Bar

    Science.gov (United States)

    Petersen, Michael S.; Weinberg, Martin D.; Katz, Neal

    2016-09-01

    We investigate the complex interactions between the stellar disc and the dark-matter halo during bar formation and evolution using N-body simulations with fine temporal resolution and optimally chosen spatial resolution. We find that the forming stellar bar traps dark matter in the vicinity of the stellar bar into bar-supporting orbits. We call this feature the shadow bar. The shadow bar modifies both the location and magnitude of the angular momentum transfer between the disc and dark matter halo and adds 10 per cent to the mass of the stellar bar over 4 Gyr. The shadow bar is potentially observable by its density and velocity signature in spheroid stars and by direct dark matter detection experiments. Numerical tests demonstrate that the shadow bar can diminish the rate of angular momentum transport from the bar to the dark matter halo by more than a factor of three over the rate predicted by dynamical friction with an untrapped dark halo, and thus provides a possible physical explanation for the observed prevalence of fast bars in nature.

  14. Dark Matter Trapping by Stellar Bars: The Shadow Bar

    CERN Document Server

    Petersen, Michael S; Katz, Neal

    2016-01-01

    We investigate the complex interactions between the stellar disc and the dark-matter halo during bar formation and evolution using N-body simulations with fine temporal resolution and optimally chosen spatial resolution. We find that the forming stellar bar traps dark matter in the vicinity of the stellar bar into bar-supporting orbits. We call this feature the shadow bar. The shadow bar modifies both the location and magnitude of the angular momentum transfer between the disc and dark matter halo and adds 10 per cent to the mass of the stellar bar over 4 Gyr. The shadow bar is potentially observable by its density and velocity signature in spheroid stars and by direct dark matter detection experiments. Numerical tests demonstrate that the shadow bar can diminish the rate of angular momentum transport from the bar to the dark matter halo by more than a factor of three over the naive dynamical friction prediction, and thus provides a possible physical explanation for the observed prevalence of fast bars in nat...

  15. Cooling of rectangular bars

    International Nuclear Information System (INIS)

    A solution of the time-transient Heat Transfer Differential Equation in rectangular coordinates is presented, leading to a model which describes the temperature drop with time in rectangular bars. It is similar to an other model for cilindrical bars which has been previously developed in the Laboratory of Mechanical Metallurgy of UFRGS. Following these models, a generalization has been made, which permits cooling time evaluation for all profiles. These results are compared with experimental laboratory data in the 1200 to 8000C range. Some other existing models were also studied which have the purpose of studing the same phenomenon. Their mathematical forms and their evaluated values are analyzed and compared with experimental ones. (Author)

  16. The bar instability revisited

    CERN Document Server

    Chiodi, Filippo; Claudin, Philippe

    2012-01-01

    The river bar instability is revisited, using a hydrodynamical model based on Reynolds averaged Navier-Stokes equations. The results are contrasted with the standard analysis based on shallow water Saint-Venant equations. We first show that the stability of both transverse modes (ripples) and of small wavelength inclined modes (bars) predicted by the Saint-Venant approach are artefacts of this hydrodynamical approximation. When using a more reliable hydrodynamical model, the dispersion relation does not present any maximum of the growth rate when the sediment transport is assumed to be locally saturated. The analysis therefore reveals the fundamental importance of the relaxation of sediment transport towards equilibrium as it it is responsible for the stabilisation of small wavelength modes. This dynamical mechanism is characterised by the saturation number, defined as the ratio of the saturation length to the water depth Lsat/H. This dimensionless number controls the transition from ripples (transverse patte...

  17. Breaking through the Bar

    Science.gov (United States)

    Gray, Katti

    2011-01-01

    Howard University School of Law had a problem, and school officials knew it. Over a 20-year period, 40 percent of its graduates who took the Maryland bar exam failed it on their first try. During the next 24 months--the time frame required to determine its "eventual pass rate"--almost 90 percent of the students did pass. What they did not know was…

  18. Aberrant splicing and drug resistance in AML.

    Science.gov (United States)

    de Necochea-Campion, Rosalia; Shouse, Geoffrey P; Zhou, Qi; Mirshahidi, Saied; Chen, Chien-Shing

    2016-01-01

    The advent of next-generation sequencing technologies has unveiled a new window into the heterogeneity of acute myeloid leukemia (AML). In particular, recurrent mutations in spliceosome machinery and genome-wide aberrant splicing events have been recognized as a prominent component of this disease. This review will focus on how these factors influence drug resistance through altered splicing of tumor suppressor and oncogenes and dysregulation of the apoptotic signaling network. A better understanding of these factors in disease progression is necessary to design appropriate therapeutic strategies recognizing specific alternatively spliced or mutated oncogenic targets. PMID:27613060

  19. ASDB: database of alternatively spliced genes

    OpenAIRE

    Dralyuk, I; Brudno, M.; Gelfand, M S; Zorn, M.; Dubchak, I.

    2000-01-01

    Version 2.1 of ASDB (Alternative Splicing Data Base) contains 1922 protein and 2486 DNA sequences. The protein entries from SWISS-PROT are joined into clusters corresponding to alternatively spliced variants of one gene. The DNA division consists of complete genes with alternative splicing mentioned or annotated in GenBank. The search engine allows one to search over SWISS-PROT and GenBank fields and then follow the links to all variants. The database can be assessed at the URL http://cbcg.ne...

  20. Regulation of Alternative Splicing in Vivo by Overexpression of Antagonistic Splicing Factors

    Science.gov (United States)

    Caceres, Javier F.; Stamm, Stefan; Helfman, David M.; Krainer, Adrian R.

    1994-09-01

    The opposing effects of SF2/ASF and heterogeneous nuclear ribonucleoprotein (hnRNP) A1 influence alternative splicing in vitro. SF2/ASF or hnRNP A1 complementary DNAs were transiently overexpressed in HeLa cells, and the effect on alternative splicing of several cotransfected reporter genes was measured. Increased expression of SF2/ASF activated proximal 5' splice sites, promoted inclusion of a neuron-specific exon, and prevented abnormal exon skipping. Increased expression of hnRNP A1 activated distal 5' splice sites. Therefore, variations in the intracellular levels of antagonistic splicing factors influence different modes of alternative splicing in vivo and may be a natural mechanism for tissue-specific or developmental regulation of gene expression.

  1. Analysis of differential splicing suggests different modes of short-term splicing regulation

    OpenAIRE

    Topa, Hande; Honkela, Antti

    2016-01-01

    Motivation: Alternative splicing is an important mechanism in which the regions of pre-mRNAs are differentially joined in order to form different transcript isoforms. Alternative splicing is involved in the regulation of normal physiological functions but also linked to the development of diseases such as cancer. We analyse differential expression and splicing using RNA-sequencing time series in three different settings: overall gene expression levels, absolute transcript expression levels an...

  2. BUS 475 UOP Course Tutorial/ Tutorialrank

    OpenAIRE

    john

    2015-01-01

    For more course tutorials visit www.tutorialrank.com Tutorial Purchased: 6 Times, Rating: A+   BUS 475 Capstone Final Examination Part 1   1.    In the managerial function of __________, managers encourage and motivate workers to work toward organizational goals.   2.    eBay.com is a vast auction site that is similar to a competitive market in some ways but differs from it in others. Which of the following describes...

  3. Exposure Assessment of Diesel Bus Emissions

    Directory of Open Access Journals (Sweden)

    Werner Hofmann

    2006-12-01

    Full Text Available The goal of this study was to measure ultrafine particle concentrations with diameters less than 1 μm emitted by diesel buses and to assess resulting human exposure levels. The study was conducted at the Woolloongabba Busway station in Brisbane, Australia in the winter months of 2002 during which temperature inversions frequently occurred. Most buses that utilize the station are fuelled by diesel, the exhaust of which contains a significant quantity of particle matter. Passengers waiting at the station are exposed to these particles emitted from the buses. During the course of this study, passenger census was conducted, based on video surveillance, yielding person-by-person waiting time data. Furthermore, a bus census revealed accurate information about the total number of diesel versus Compressed Natural Gas (CNG powered buses. Background (outside of the bus station and platform measurements of ultrafine particulate number size distributions were made to determine ambient aerosol concentrations. Particle number exposure concentration ranges from 10 and 40 to 60% of bus related exhaust fumes. This changes dramatically when considering the particle mass exposure concentration, where most passengers are exposed to about 50 to 80% of exhaust fumes. The obtained data can be very significant for comparison with similar work of this type because it is shown in previous studies that exhaust emissions causes cancer in laboratory animals. It was assumed that significant differences between platform and background distributions were due to bus emissions which, combined with passenger waiting times, yielded an estimate of passenger exposure to ultrafine particles from diesel buses. From an exposure point of view, the Busway station analyzed resembles a street canyon. Although the detected exhaust particle concentration at the outbound platform is found to be in the picogram range, exposure increases with the time passengers spend on the platform

  4. Hollywood: a comparative relational database of alternative splicing

    OpenAIRE

    Holste, Dirk; Huo, George; Tung, Vivian; Burge, Christopher B.

    2005-01-01

    RNA splicing is an essential step in gene expression, and is often variable, giving rise to multiple alternatively spliced mRNA and protein isoforms from a single gene locus. The design of effective databases to support experimental and computational investigations of alternative splicing (AS) is a significant challenge. In an effort to integrate accurate exon and splice site annotation with current knowledge about splicing regulatory elements and predicted AS events, and to link information ...

  5. HIV-1 Vpr: A Novel Role in Regulating RNA Splicing

    OpenAIRE

    Zhang, Xianfeng; Aida, Yoko

    2009-01-01

    Pre-mRNA splicing is a critical step in gene expression for metazoans. Several viral proteins regulate the splicing of pre-mRNAs through complex interactions between the virus and the host cell RNA splicing machinery. Here, we focus on a novel function of HIV-1 Vpr, that selectively inhibit cellular and viral pre-mRNA splicing, via interactions with components of functional spliceosomal complexes. This review discusses our current knowledge of how RNA splicing regulation is accomplished by Vp...

  6. Observations of offshore bar decay

    DEFF Research Database (Denmark)

    Aagaard, Troels; Kroon, Aart; Greenwood, Brian;

    2010-01-01

    Long-term, net offshore bar migration is a common occurrence on many multiple-barred beaches. The first stage of the process involves the generation of a longshore bar close to the shoreline that oscillates about a mean position for some time, followed by a stage of net offshore migration across...... the upper shoreface, and finally a stage of decaying bar form through loss of sediment volume at the outer boundary of the upper shoreface. The phenomenon has been previously documented in the Netherlands, the USA, the Canadian Great Lakes, and in New Zealand, but our present understanding...... of the morphodynamic processes and sediment transport pathways involved in bar decay is limited. In this paper, long-term, net offshore bar migration is investigated at Vejers Beach, located on the North Sea coast of Denmark where offshore bar migration rates are of the order of 45–55 m a-1. A wave height...

  7. Brazilian hybrid electric fuel cell bus

    Energy Technology Data Exchange (ETDEWEB)

    Miranda, P.E.V.; Carreira, E.S. [Coppe-Federal Univ. of Rio de Janeiro (Brazil). Hydrogen Lab.

    2010-07-01

    The first prototype of a hybrid electric fuel cell bus developed with Brazilian technology is unveiled. It is a 12 m urban-type, low-floor, air-conditioned bus that possesses three doors, air suspension, 29 seats and reversible wheelchair site. The bus body was built based on a double-deck type monoblock vehicle that is able to sustain important load on its roof. This allowed positioning of the type 3 hydrogen tanks and the low weight traction batteries on the roof of the vehicles without dynamic stabilization problems. A novel hybrid energy configuration was designed in such a way that the low-power (77 kWe) fuel cell works on steady-state operation mode, not responding directly to the traction motor load demand. The rate of kinetic energy regeneration upon breaking was optimized by the use of an electric hybrid system with predominance of batteries and also by utilizing supercapacitors. The electric-electronic devices and the security control softwares for the auxiliary and traction systems were developed in-house. The innovative hybrid-electric traction system configuration led to the possibility to decrease the fuel cell power, with positive impact on weight and system volume reduction, as well as to significantly decrease the hydrogen consumption. (orig.)

  8. Control of Pre-mRNA Splicing by the General Splicing Factors PUF60 and U2AF65

    OpenAIRE

    Hastings, Michelle L.; Eric Allemand; Duelli, Dominik M.; Michael P Myers; Krainer, Adrian R.

    2007-01-01

    Pre-mRNA splicing is a crucial step in gene expression, and accurate recognition of splice sites is an essential part of this process. Splice sites with weak matches to the consensus sequences are common, though it is not clear how such sites are efficiently utilized. Using an in vitro splicing-complementation approach, we identified PUF60 as a factor that promotes splicing of an intron with a weak 3' splice-site. PUF60 has homology to U2AF(65), a general splicing factor that facilitates 3' s...

  9. Distinct splicing signatures affect converged pathways in myelodysplastic syndrome patients carrying mutations in different splicing regulators.

    Science.gov (United States)

    Qiu, Jinsong; Zhou, Bing; Thol, Felicitas; Zhou, Yu; Chen, Liang; Shao, Changwei; DeBoever, Christopher; Hou, Jiayi; Li, Hairi; Chaturvedi, Anuhar; Ganser, Arnold; Bejar, Rafael; Zhang, Dong-Er; Fu, Xiang-Dong; Heuser, Michael

    2016-10-01

    Myelodysplastic syndromes (MDS) are heterogeneous myeloid disorders with prevalent mutations in several splicing factors, but the splicing programs linked to specific mutations or MDS in general remain to be systematically defined. We applied RASL-seq, a sensitive and cost-effective platform, to interrogate 5502 annotated splicing events in 169 samples from MDS patients or healthy individuals. We found that splicing signatures associated with normal hematopoietic lineages are largely related to cell signaling and differentiation programs, whereas MDS-linked signatures are primarily involved in cell cycle control and DNA damage responses. Despite the shared roles of affected splicing factors in the 3' splice site definition, mutations in U2AF1, SRSF2, and SF3B1 affect divergent splicing programs, and interestingly, the affected genes fall into converging cancer-related pathways. A risk score derived from 11 splicing events appears to be independently associated with an MDS prognosis and AML transformation, suggesting potential clinical relevance of altered splicing patterns in MDS. PMID:27492256

  10. Competition between pre-mRNAs for the splicing machinery drives global regulation of splicing.

    Science.gov (United States)

    Munding, Elizabeth M; Shiue, Lily; Katzman, Sol; Donohue, John Paul; Ares, Manuel

    2013-08-01

    During meiosis in yeast, global splicing efficiency increases and then decreases. Here we provide evidence that splicing improves due to reduced competition for the splicing machinery. The timing of this regulation corresponds to repression and reactivation of ribosomal protein genes (RPGs) during meiosis. In vegetative cells, RPG repression by rapamycin treatment also increases splicing efficiency. Downregulation of the RPG-dedicated transcription factor gene IFH1 genetically suppresses two spliceosome mutations, prp11-1 and prp4-1, and globally restores splicing efficiency in prp4-1 cells. We conclude that the splicing apparatus is limiting and that pre-messenger RNAs compete. Splicing efficiency of a pre-mRNA therefore depends not just on its own concentration and affinity for limiting splicing factor(s), but also on those of competing pre-mRNAs. Competition between RNAs for limiting processing factors appears to be a general condition in eukaryotes for a variety of posttranscriptional control mechanisms including microRNA (miRNA) repression, polyadenylation, and splicing. PMID:23891561

  11. Reliability analysis of the Angra-1 safety electric bus bar, considering the new Diesel generators configuration

    International Nuclear Information System (INIS)

    Aiming the electrical system reliability improvement, the Angra-1 energy electric system has been modified. The two original Diesel generators were replaced by two new ones, and the former were configured as standby generators. The purpose of this work is to quantify the electric system reliability improvement under the mentioned modifications by using Markovian analysis. It was found that the new configuration for the emergency Diesel system improves significantly the power supply to the safety buses. (author). 8 refs., 3 figs., 5 tabs

  12. Protein splicing and its evolution in eukaryotes

    Directory of Open Access Journals (Sweden)

    Starokadomskyy P. L.

    2010-02-01

    Full Text Available Inteins, or protein introns, are parts of protein sequences that are post-translationally excised, their flanking regions (exteins being spliced together. This process was called protein splicing. Originally inteins were found in prokaryotic or unicellular eukaryotic organisms. But the general principles of post-translation protein rearrangement are evolving yielding different post-translation modification of proteins in multicellular organisms. For clarity, these non-intein mediated events call either protein rearrangements or protein editing. The most intriguing example of protein editing is proteasome-mediated splicing of antigens in vertebrates that may play important role in antigen presentation. Other examples of protein rearrangements are maturation of Hg-proteins (critical receptors in embryogenesis as well as maturation of several metabolic enzymes. Despite a lack of experimental data we try to analyze some intriguing examples of protein splicing evolution.

  13. Group II Intron Self-Splicing.

    Science.gov (United States)

    Pyle, Anna Marie

    2016-07-01

    Group II introns are large, autocatalytic ribozymes that catalyze RNA splicing and retrotransposition. Splicing by group II introns plays a major role in the metabolism of plants, fungi, and yeast and contributes to genetic variation in many bacteria. Group II introns have played a major role in genome evolution, as they are likely progenitors of spliceosomal introns, retroelements, and other machinery that controls genetic variation and stability. The structure and catalytic mechanism of group II introns have recently been elucidated through a combination of genetics, chemical biology, solution biochemistry, and crystallography. These studies reveal a dynamic machine that cycles progressively through multiple conformations as it stimulates the various stages of splicing. A central active site, containing a reactive metal ion cluster, catalyzes both steps of self-splicing. These studies provide insights into RNA structure, folding, and catalysis, as they raise new questions about the behavior of RNA machines. PMID:27391926

  14. Faster exon assembly by sparse spliced alignment

    CERN Document Server

    Tiskin, Alexander

    2007-01-01

    Assembling a gene from candidate exons is an important problem in computational biology. Among the most successful approaches to this problem is \\emph{spliced alignment}, proposed by Gelfand et al., which scores different candidate exon chains within a DNA sequence of length $m$ by comparing them to a known related gene sequence of length n, $m = \\Theta(n)$. Gelfand et al.\\ gave an algorithm for spliced alignment running in time O(n^3). Kent et al.\\ considered sparse spliced alignment, where the number of candidate exons is O(n), and proposed an algorithm for this problem running in time O(n^{2.5}). We improve on this result, by proposing an algorithm for sparse spliced alignment running in time O(n^{2.25}). Our approach is based on a new framework of \\emph{quasi-local string comparison}.

  15. Tau exon 10 alternative splicing and tauopathies

    OpenAIRE

    Liu Fei; Gong Cheng-Xin

    2008-01-01

    Abstract Abnormalities of microtubule-associated protein tau play a central role in neurofibrillary degeneration in several neurodegenerative disorders that collectively called tauopathies. Six isoforms of tau are expressed in adult human brain, which result from alternative splicing of pre-mRNA generated from a single tau gene. Alternative splicing of tau exon 10 results in tau isoforms containing either three or four microtubule-binding repeats (3R-tau and 4R-tau, respectively). Approximate...

  16. Alcoholism and Alternative Splicing of Candidate Genes

    OpenAIRE

    Toshikazu Sasabe; Shoichi Ishiura

    2010-01-01

    Gene expression studies have shown that expression patterns of several genes have changed during the development of alcoholism. Gene expression is regulated not only at the level of transcription but also through alternative splicing of pre-mRNA. In this review, we discuss some of the evidence suggesting that alternative splicing of candidate genes such as DRD2 (encoding dopamine D2 receptor) may form the basis of the mechanisms underlying the pathophysiology of alcoholism. These reports sugg...

  17. Study of bus driving parameters on urban route

    OpenAIRE

    Fuad DASHDAMIROV

    2011-01-01

    The article deals with bus traffic time and speed on stage and route in the whole. The factors affecting bus driving parameters are divided into groups. The factors of significant impact are found in each group. The method of consideration of such factors impact on driving parameters in timetable making, is proposed. The extent of impact of selected factors on bus driving time and speed is studied.

  18. Ukola Club. Bar americano

    Directory of Open Access Journals (Sweden)

    Azpiazu, J. R.

    1961-03-01

    Full Text Available En la calle de Serrano, aprovechando un semisótano dedicado a otro negocio anteriormente, se ha instalado un bar americano, de cuyo interior ofrecemos algunos pormenores. Se han cuidado, especialmente, las condiciones acústicas, resueltas por medio de un techo de escayola perforada, con vitrofib en su parte superior, y paredes de madera, que contribuyen a darle un ambiente cálido y acogedor. El soporte de hierro laminado existente en el centro del local, cuya supresión hubiera sido costosa, se ha revestido con lajas de mármol que le convierten en un elemento decorativo.

  19. Evolution of alternative splicing regulation: changes in predicted exonic splicing regulators are not associated with changes in alternative splicing levels in primates

    OpenAIRE

    Manuel Irimia; Jakob Lewin Rukov; Scott William Roy

    2009-01-01

    Alternative splicing is tightly regulated in a spatio-temporal and quantitative manner. This regulation is achieved by a complex interplay between spliceosomal (trans) factors that bind to different sequence (cis) elements. cis-elements reside in both introns and exons and may either enhance or silence splicing. Differential combinations of cis-elements allows for a huge diversity of overall splicing signals, together comprising a complex ‘splicing code’. Many cis-elements have been identifie...

  20. The SMART MIL-STD-1553 bus adapter hardware manual

    Science.gov (United States)

    Ton, T. T.

    1981-01-01

    The SMART Multiplexer Interface Adapter, (SMIA) a complete system interface for message structure of the MIL-STD-1553, is described. It provides buffering and storage for transmitted and received data and handles all the necessary handshaking to interface between parallel 8-bit data bus and a MIL-STD serial bit stream. The bus adapter is configured as either a bus controller of a remote terminal interface. It is coupled directly to the multiplex bus, or stub coupled through an additional isolation transformer located at the connection point. Fault isolation resistors provide short circuit protection.

  1. Examination of an Urban City Bus Operating Conditions and Emissions

    OpenAIRE

    Soylu, Seref (Coordinador); Bal, Ayda; Semercioglu, Hulya; Ay, Eyup Fatih

    2010-01-01

    It was observed that real world driving characteristics of the city bus don’t correlate well with that of the ETC, which is the certification cycle for the city bus engines. For this reason it is not realistic to expect emission levels lower than corresponding EURO standards from the city bus during real world driving. City bus NOx emissions in terms of grams per second are increasing with engine load and speed but the total NOx emissions for entire trip are the maximum at the locations whe...

  2. Multi-Gigabit Rate Radiation Hard Bus Project

    Data.gov (United States)

    National Aeronautics and Space Administration — High speed robust very low power radiation hardened bus interconnects are required to accelerate on-board computations, further improve reconfigurability and...

  3. Bus accident severity and passenger injury: evidence from Denmark

    DEFF Research Database (Denmark)

    Prato, Carlo Giacomo; Kaplan, Sigal

    2014-01-01

    light. Occurrence of injury to bus passengers is positively related to (i) the involvement of heavy vehicles, (ii) crossing intersections in yellow or red light, (iii) open areas, (iv) high speed limits, and (v) slippery road surface. Conclusions The findings of the current study provide a comprehensive...... examining occurrence of injury to bus passengers. Results Bus accident severity is positively related to (i) the involvement of vulnerable road users, (ii) high speed limits, (iii) night hours, (iv) elderly drivers of the third party involved, and (v) bus drivers and other drivers crossing in yellow or red...

  4. Status of the IEEE P896 Future Backplane Bus

    International Nuclear Information System (INIS)

    The IEEE P896 Future Backplane Bus project has been influenced by and has influenced FASTBUS and several other contemporary bus designs. This paper summarizes the current status of that project, which is directed toward the needs of modern 32-bit microprocessor systems with multiple processors. Some of the technology developed for P896 will be important for future non-ECL implementations of FASTBUS and other buses. In particular, new bus drivers and receivers should greatly improve the performance and reliability of backplane buses and cable buses. The current status of the P896 serial bus is also summarized

  5. The decays \\bar{B}->\\bar{K}D and \\bar{B}-> \\bar{K}\\bar{D} and final state interactions

    CERN Document Server

    Fayyazuddin, A

    2001-01-01

    The decays \\bar{B}-> \\bar{K}D and \\bar{B}-> \\bar{K}\\bar{D} taking into account final state interactions are discussed. These decays are described by four strong phases \\delta_0,\\delta_1,\\bar{\\delta}_0,\\bar{\\delta}_1 (subscripts 0 and 1 refers to I=0 and I=1 final states), one weak phase \\gamma and four real amplitudes. It is argued that strong interaction dynamics implies \\bar{\\delta}_1=0,\\delta_0=-\\delta_1. Rescattering has significant effects on weak amplitudes. Taking into account, rescattering, we find that direct CP--violating asymmetry in these decays may lie in the range \\mp 0.023\\sin \\gamma \\leq \\QTR{cal}{A}_{1,2}\\leq \\mp 0.086\\sin \\gamma.

  6. Splicing therapy for neuromuscular disease.

    Science.gov (United States)

    Douglas, Andrew G L; Wood, Matthew J A

    2013-09-01

    Duchenne muscular dystrophy (DMD) and spinal muscular atrophy (SMA) are two of the most common inherited neuromuscular diseases in humans. Both conditions are fatal and no clinically available treatments are able to significantly alter disease course in either case. However, by manipulation of pre-mRNA splicing using antisense oligonucleotides, defective transcripts from the DMD gene and from the SMN2 gene in SMA can be modified to once again produce protein and restore function. A large number of in vitro and in vivo studies have validated the applicability of this approach and an increasing number of preliminary clinical trials have either been completed or are under way. Several different oligonucleotide chemistries can be used for this purpose and various strategies are being developed to facilitate increased delivery efficiency and prolonged therapeutic effect. As these novel therapeutic compounds start to enter the clinical arena, attention must also be drawn to the question of how best to facilitate the clinical development of such personalised genetic therapies and how best to implement their provision. PMID:23631896

  7. Alternative Splice in Alternative Lice.

    Science.gov (United States)

    Tovar-Corona, Jaime M; Castillo-Morales, Atahualpa; Chen, Lu; Olds, Brett P; Clark, John M; Reynolds, Stuart E; Pittendrigh, Barry R; Feil, Edward J; Urrutia, Araxi O

    2015-10-01

    Genomic and transcriptomics analyses have revealed human head and body lice to be almost genetically identical; although con-specific, they nevertheless occupy distinct ecological niches and have differing feeding patterns. Most importantly, while head lice are not known to be vector competent, body lice can transmit three serious bacterial diseases; epidemictyphus, trench fever, and relapsing fever. In order to gain insights into the molecular bases for these differences, we analyzed alternative splicing (AS) using next-generation sequencing data for one strain of head lice and one strain of body lice. We identified a total of 3,598 AS events which were head or body lice specific. Exon skipping AS events were overrepresented among both head and body lice, whereas intron retention events were underrepresented in both. However, both the enrichment of exon skipping and the underrepresentation of intron retention are significantly stronger in body lice compared with head lice. Genes containing body louse-specific AS events were found to be significantly enriched for functions associated with development of the nervous system, salivary gland, trachea, and ovarian follicle cells, as well as regulation of transcription. In contrast, no functional categories were overrepresented among genes with head louse-specific AS events. Together, our results constitute the first evidence for transcript pool differences in head and body lice, providing insights into molecular adaptations that enabled human lice to adapt to clothing, and representing a powerful illustration of the pivotal role AS can play in functional adaptation. PMID:26169943

  8. Bar piezoelectric ceramic transformers.

    Science.gov (United States)

    Erhart, Jiří; Pulpan, Půlpán; Rusin, Luboš

    2013-07-01

    Bar-shaped piezoelectric ceramic transformers (PTs) working in the longitudinal vibration mode (k31 mode) were studied. Two types of the transformer were designed--one with the electrode divided into two segments of different length, and one with the electrodes divided into three symmetrical segments. Parameters of studied transformers such as efficiency, transformation ratio, and input and output impedances were measured. An analytical model was developed for PT parameter calculation for both two- and three-segment PTs. Neither type of bar PT exhibited very high efficiency (maximum 72% for three-segment PT design) at a relatively high transformation ratio (it is 4 for two-segment PT and 2 for three-segment PT at the fundamental resonance mode). The optimum resistive loads were 20 and 10 kΩ for two- and three-segment PT designs for the fundamental resonance, respectively, and about one order of magnitude smaller for the higher overtone (i.e., 2 kΩ and 500 Ω, respectively). The no-load transformation ratio was less than 27 (maximum for two-segment electrode PT design). The optimum input electrode aspect ratios (0.48 for three-segment PT and 0.63 for two-segment PT) were calculated numerically under no-load conditions.

  9. Spliced leader trapping reveals widespread alternative splicing patterns in the highly dynamic transcriptome of Trypanosoma brucei.

    Directory of Open Access Journals (Sweden)

    Daniel Nilsson

    Full Text Available Trans-splicing of leader sequences onto the 5'ends of mRNAs is a widespread phenomenon in protozoa, nematodes and some chordates. Using parallel sequencing we have developed a method to simultaneously map 5'splice sites and analyze the corresponding gene expression profile, that we term spliced leader trapping (SLT. The method can be applied to any organism with a sequenced genome and trans-splicing of a conserved leader sequence. We analyzed the expression profiles and splicing patterns of bloodstream and insect forms of the parasite Trypanosoma brucei. We detected the 5' splice sites of 85% of the annotated protein-coding genes and, contrary to previous reports, found up to 40% of transcripts to be differentially expressed. Furthermore, we discovered more than 2500 alternative splicing events, many of which appear to be stage-regulated. Based on our findings we hypothesize that alternatively spliced transcripts present a new means of regulating gene expression and could potentially contribute to protein diversity in the parasite. The entire dataset can be accessed online at TriTrypDB or through: http://splicer.unibe.ch/.

  10. Dynamical Evolution of Barred Galaxies

    OpenAIRE

    Athanassoula, E

    2005-01-01

    Angular momentum redistribution within barred galaxies drives their dynamical evolution. Angular momentum is emitted mainly by near-resonant material in the bar region and absorbed by resonant material mainly in the outer disc and in the halo. This exchange determines the strength of the bar, the decrease of its pattern speed, as well as its morphology. If the galaxy has also a gaseous component and/or a companion or satellite, then these also take part in the angular momentum exchange. Durin...

  11. BRCA1 Exon 11, a CERES (Composite Regulatory Element of Splicing Element Involved in Splice Regulation

    Directory of Open Access Journals (Sweden)

    Claudia Tammaro

    2014-07-01

    Full Text Available Unclassified variants (UV of BRCA1 can affect normal pre-mRNA splicing. Here, we investigate the UV c.693G>A, a “silent” change in BRCA1 exon 11, which we have found induces aberrant splicing in patient carriers and in vitro. Using a minigene assay, we show that the UV c.693G>A has a strong effect on the splicing isoform ratio of BRCA1. Systematic site-directed mutagenesis of the area surrounding the nucleotide position c.693G>A induced variable changes in the level of exon 11 inclusion/exclusion in the mRNA, pointing to the presence of a complex regulatory element with overlapping enhancer and silencer functions. Accordingly, protein binding analysis in the region detected several splicing regulatory factors involved, including SRSF1, SRSF6 and SRSF9, suggesting that this sequence represents a composite regulatory element of splicing (CERES.

  12. A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection.

    Science.gov (United States)

    Hoffmann, Steve; Otto, Christian; Doose, Gero; Tanzer, Andrea; Langenberger, David; Christ, Sabina; Kunz, Manfred; Holdt, Lesca M; Teupser, Daniel; Hackermüller, Jörg; Stadler, Peter F

    2014-02-10

    Numerous high-throughput sequencing studies have focused on detecting conventionally spliced mRNAs in RNA-seq data. However, non-standard RNAs arising through gene fusion, circularization or trans-splicing are often neglected. We introduce a novel, unbiased algorithm to detect splice junctions from single-end cDNA sequences. In contrast to other methods, our approach accommodates multi-junction structures. Our method compares favorably with competing tools for conventionally spliced mRNAs and, with a gain of up to 40% of recall, systematically outperforms them on reads with multiple splits, trans-splicing and circular products. The algorithm is integrated into our mapping tool segemehl (http://www.bioinf.uni-leipzig.de/Software/segemehl/).

  13. RNA splicing. The human splicing code reveals new insights into the genetic determinants of disease.

    Science.gov (United States)

    Xiong, Hui Y; Alipanahi, Babak; Lee, Leo J; Bretschneider, Hannes; Merico, Daniele; Yuen, Ryan K C; Hua, Yimin; Gueroussov, Serge; Najafabadi, Hamed S; Hughes, Timothy R; Morris, Quaid; Barash, Yoseph; Krainer, Adrian R; Jojic, Nebojsa; Scherer, Stephen W; Blencowe, Benjamin J; Frey, Brendan J

    2015-01-01

    To facilitate precision medicine and whole-genome annotation, we developed a machine-learning technique that scores how strongly genetic variants affect RNA splicing, whose alteration contributes to many diseases. Analysis of more than 650,000 intronic and exonic variants revealed widespread patterns of mutation-driven aberrant splicing. Intronic disease mutations that are more than 30 nucleotides from any splice site alter splicing nine times as often as common variants, and missense exonic disease mutations that have the least impact on protein function are five times as likely as others to alter splicing. We detected tens of thousands of disease-causing mutations, including those involved in cancers and spinal muscular atrophy. Examination of intronic and exonic variants found using whole-genome sequencing of individuals with autism revealed misspliced genes with neurodevelopmental phenotypes. Our approach provides evidence for causal variants and should enable new discoveries in precision medicine.

  14. Differential splicing using whole-transcript microarrays

    Directory of Open Access Journals (Sweden)

    Robinson Mark D

    2009-05-01

    Full Text Available Abstract Background The latest generation of Affymetrix microarrays are designed to interrogate expression over the entire length of every locus, thus giving the opportunity to study alternative splicing genome-wide. The Exon 1.0 ST (sense target platform, with versions for Human, Mouse and Rat, is designed primarily to probe every known or predicted exon. The smaller Gene 1.0 ST array is designed as an expression microarray but still interrogates expression with probes along the full length of each well-characterized transcript. We explore the possibility of using the Gene 1.0 ST platform to identify differential splicing events. Results We propose a strategy to score differential splicing by using the auxiliary information from fitting the statistical model, RMA (robust multichip analysis. RMA partitions the probe-level data into probe effects and expression levels, operating robustly so that if a small number of probes behave differently than the rest, they are downweighted in the fitting step. We argue that adjacent poorly fitting probes for a given sample can be evidence of differential splicing and have designed a statistic to search for this behaviour. Using a public tissue panel dataset, we show many examples of tissue-specific alternative splicing. Furthermore, we show that evidence for putative alternative splicing has a strong correspondence between the Gene 1.0 ST and Exon 1.0 ST platforms. Conclusion We propose a new approach, FIRMAGene, to search for differentially spliced genes using the Gene 1.0 ST platform. Such an analysis complements the search for differential expression. We validate the method by illustrating several known examples and we note some of the challenges in interpreting the probe-level data. Software implementing our methods is freely available as an R package.

  15. Vitamin D and alternative splicing of RNA.

    Science.gov (United States)

    Zhou, Rui; Chun, Rene F; Lisse, Thomas S; Garcia, Alejandro J; Xu, Jianzhong; Adams, John S; Hewison, Martin

    2015-04-01

    The active form of vitamin D (1α,25-dihydroxyvitamin D, 1,25(OH)2D) exerts its genomic effects via binding to a nuclear high-affinity vitamin D receptor (VDR). Recent deep sequencing analysis of VDR binding locations across the complete genome has significantly expanded our understanding of the actions of vitamin D and VDR on gene transcription. However, these studies have also promoted appreciation of the extra-transcriptional impact of vitamin D on gene expression. It is now clear that vitamin D interacts with the epigenome via effects on DNA methylation, histone acetylation, and microRNA generation to maintain normal biological functions. There is also increasing evidence that vitamin D can influence pre-mRNA constitutive splicing and alternative splicing, although the mechanism for this remains unclear. Pre-mRNA splicing has long been thought to be a post-transcription RNA processing event, but current data indicate that this occurs co-transcriptionally. Several steroid hormones have been recognized to coordinately control gene transcription and pre-mRNA splicing through the recruitment of nuclear receptor co-regulators that can both control gene transcription and splicing. The current review will discuss this concept with specific reference to vitamin D, and the potential role of heterogeneous nuclear ribonucleoprotein C (hnRNPC), a nuclear factor with an established function in RNA splicing. hnRNPC, has been shown to be involved in the VDR transcriptional complex as a vitamin D-response element-binding protein (VDRE-BP), and may act as a coupling factor linking VDR-directed gene transcription with RNA splicing. In this way hnRNPC may provide an additional mechanism for the fine-tuning of vitamin D-regulated target gene expression. This article is part of a Special Issue entitled '17th Vitamin D Workshop'.

  16. Modulation of 5' splice site selection using tailed oligonucleotides carrying splicing signals

    Directory of Open Access Journals (Sweden)

    Elela Sherif

    2006-01-01

    Full Text Available Abstract Background We previously described the use of tailed oligonucleotides as a means of reprogramming alternative pre-mRNA splicing in vitro and in vivo. The tailed oligonucleotides that were used interfere with splicing because they contain a portion complementary to sequences immediately upstream of the target 5' splice site combined with a non-hybridizing 5' tail carrying binding sites for the hnRNP A1/A2 proteins. In the present study, we have tested the inhibitory activity of RNA oligonucleotides carrying different tail structures. Results We show that an oligonucleotide with a 5' tail containing the human β-globin branch site sequence inhibits the use of the 5' splice site of Bcl-xL, albeit less efficiently than a tail containing binding sites for the hnRNP A1/A2 proteins. A branch site-containing tail positioned at the 3' end of the oligonucleotide also elicited splicing inhibition but not as efficiently as a 5' tail. The interfering activity of a 3' tail was improved by adding a 5' splice site sequence next to the branch site sequence. A 3' tail carrying a Y-shaped branch structure promoted similar splicing interference. The inclusion of branch site or 5' splice site sequences in the Y-shaped 3' tail further improved splicing inhibition. Conclusion Our in vitro results indicate that a variety of tail architectures can be used to elicit splicing interference at low nanomolar concentrations, thereby broadening the scope and the potential impact of this antisense technology.

  17. Oracle Service Bus 11g Development Cookbook

    CERN Document Server

    Schmutz, Guido; van Zoggel, Jan

    2012-01-01

    This cookbook is full of immediately useable recipes showing you how to develop service and message-oriented (integration) applications on the Oracle Service Bus. In addition to its cookbook style, which ensures the solutions are presented in a clear step-by-step manner, the explanations go into great detail, which makes it good learning material for everyone who has experience in OSB and wants to improve. Most of the recipes are designed in such a way that each recipe is presented as a separate, standalone entity and reading of prior recipes is not required. The finished solution of each reci

  18. Redesign of Transjakarta Bus Driver's Cabin

    Science.gov (United States)

    Mardi Safitri, Dian; Azmi, Nora; Singh, Gurbinder; Astuti, Pudji

    2016-02-01

    Ergonomic risk at work stations with type Seated Work Control was one of the problems faced by Transjakarta bus driver. Currently “Trisakti” type bus, one type of bus that is used by Transjakarta in corridor 9, serving route Pinang Ranti - Pluit, gained many complaints from drivers. From the results of Nordic Body Map questionnaires given to 30 drivers, it was known that drivers feel pain in the neck, arms, hips, and buttocks. Allegedly this was due to the seat position and the button/panel bus has a considerable distance range (1 meter) to be achieved by drivers. In addition, preliminary results of the questionnaire using Workstation Checklist identified their complaints about uncomfortable cushion, driver's seat backrest, and the exact position of the AC is above the driver head. To reduce the risk level of ergonomics, then did research to design the cabin by using a generic approach to designing products. The risk analysis driver posture before the design was done by using Rapid Upper Limb Assessment (RULA), Rapid Entire Body Assessment (REBA), and Quick Exposure Checklist (QEC), while the calculation of the moment the body is done by using software Mannequin Pro V10.2. Furthermore, the design of generic products was done through the stages: need metric-matrix, house of quality, anthropometric data collection, classification tree concept, concept screening, scoring concept, design and manufacture of products in the form of two-dimensional. While the design after design risk analysis driver posture was done by using RULA, REBA, and calculation of moments body as well as the design visualized using software 3DMax. From the results of analysis before the draft design improvements cabin RULA obtained scores of 6, REBA 9, and the result amounted to 57.38% QEC and moment forces on the back is 247.3 LbF.inch and on the right hip is 72.9 LbF.in. While the results of the proposed improvements cabin design RULA obtained scores of 3, REBA 4, and the moment of force on

  19. Network Extender for MIL-STD-1553 Bus

    Science.gov (United States)

    Marcus, Julius; Hanson, T. David

    2003-01-01

    An extender system for MIL-STD-1553 buses transparently couples bus components at multiple developer sites. The bus network extender is a relatively inexpensive system that minimizes the time and cost of integration of avionic systems by providing a convenient mechanism for early testing without the need to transport the usual test equipment and personnel to an integration facility. This bus network extender can thus alleviate overloading of the test facility while enabling the detection of interface problems that can occur during the integration of avionic systems. With this bus extender in place, developers can correct and adjust their own hardware and software before products leave a development site. Currently resident at Johnson Space Center, the bus network extender is used to test the functionality of equipment that, although remotely located, is connected through a MILSTD- 1553 bus. Inasmuch as the standard bus protocol for avionic equipment is that of MIL-STD-1553, companies that supply MIL-STD-1553-compliant equipment to government or industry and that need long-distance communication support might benefit from this network bus extender

  20. A High Efficiency DC Bus Regulator / RPC for Spacecraft Applications

    Science.gov (United States)

    Birchenough, Arthur G.

    2004-02-01

    DC bus voltage regulation may be required in future high powered spacecraft due to the length of the busses or because they are not generated at precise voltage levels. In these cases the regulation range is often only a few percent increase or decrease, but conventional DC voltage regulators switch all the power passing through them, and this level of power switched determines the size and losses in the regulator. A recently developed concept uses a low power DC-DC converter in series with the bus to raise or lower the bus voltage over a small range. This partial power processing technique combines the small size and power losses of the low power converter with the ability to regulate, (over a small range) a high power bus. The Series Connected Buck Boost Regulator (SCBBR) described herein provides bus regulation with an efficiency of 98%. The circuit also provides bus switching and overcurrent limiting functions of a Remote Power Controller (RPC). This paper describes the circuit design and performance of a breadboard SCBBR configured as a bus voltage regulator providing +/- 40% voltage regulation range, bus switching, and overload limiting.

  1. Connecticut Transit (CTTRANSIT) Fuel Cell Transit Bus: Preliminary Evaluation Results

    Energy Technology Data Exchange (ETDEWEB)

    Chandler, K.; Eudy, L.

    2008-10-01

    This report provides preliminary results from a National Renewable Energy Laboratory evaluation of a protoptye fuel cell transit bus operating at Connecticut Transit in Hartford. Included are descriptions of the planned fuel cell bus demonstration and equipment; early results and agency experience are also provided.

  2. Network Analysis of Urban Traffic with Big Bus Data

    CERN Document Server

    Zhao, Kai

    2016-01-01

    Urban traffic analysis is crucial for traffic forecasting systems, urban planning and, more recently, various mobile and network applications. In this paper, we analyse urban traffic with network and statistical methods. Our analysis is based on one big bus dataset containing 45 million bus arrival samples in Helsinki. We mainly address following questions: 1. How can we identify the areas that cause most of the traffic in the city? 2. Why there is a urban traffic? Is bus traffic a key cause of the urban traffic? 3. How can we improve the urban traffic systems? To answer these questions, first, the betweenness is used to identify the most import areas that cause most traffics. Second, we find that bus traffic is not an important cause of urban traffic using statistical methods. We differentiate the urban traffic and the bus traffic in a city. We use bus delay as an identification of the urban traffic, and the number of bus as an identification of the bus traffic. Third, we give our solutions on how to improve...

  3. Review of bus drivers' occupational stress and stress prevention

    NARCIS (Netherlands)

    Kompier, M.A.J.; Di Martino, V.

    1995-01-01

    Although heterogeneous in methodology and content, 32 studies from 13 countries on bus drivers' work and health are similar in their conclusions. Bus-driving–characterized by high demands, low control and low support – can be regarded as a classic example of high-strain occupation, with high risks o

  4. Djungle power. A more remote AC bus

    Energy Technology Data Exchange (ETDEWEB)

    Boehnke, Heinz W. [Technosol, Jork (Germany)

    2010-07-01

    The Dzanga-Sangha Reserve in the Central African Republic is probably one of the world's most remote protected rainforest areas, much to the benefit of the rare species of lowland gorilla, forest elephant and local pygmy population Ba'Aka. The park is co-managed by the ''WWF-World Wide Fund for Nature'' with sponsoring from the German Regenwald-Stiftung. In 2008 wwf decided to switch from the old, failing generator supply to a solar hybrid mini-grid, along with stringent measures of energy conservation and management. After a careful energy audit Technosol designed an AC-bus system with a 22 kWp PV generator which should overcome the dependency on the old generators and their fuel demands. For 15 buildings, an entirely new distribution network was installed, state of the art energy saving devices introduced and an energy metering system deviced. The installation is operating since August 2009. In such remote locations, the reliability of the AC-bus over other generator-based solutions will be demonstrated and with the support of international organisations like the wwf the practical application of solar hybrid supply becomes a landmark of sustainable energy concepts. (orig.)

  5. Dynamical Evolution of Barred Galaxies

    CERN Document Server

    Athanassoula, E

    2005-01-01

    Angular momentum redistribution within barred galaxies drives their dynamical evolution. Angular momentum is emitted mainly by near-resonant material in the bar region and absorbed by resonant material mainly in the outer disc and in the halo. This exchange determines the strength of the bar, the decrease of its pattern speed, as well as its morphology. If the galaxy has also a gaseous component and/or a companion or satellite, then these also take part in the angular momentum exchange. During the evolution a bar structure forms in the inner parts of the halo as well. This bar is shorter and fatter than the disc bar and stays so all through the simulation, although its length grows considerably with time. Viewed edge-on, the bar in the disc component acquires a boxy or peanut shape. I describe the families of periodic orbits that explain such structures and review the observations showing that boxy/peanut `bulges' are in fact just bars seen edge-on.

  6. 改进的多母线船舶电力系统短路电流计算方法%An Improved Short-Circuit Current Calculation Method for Multi-Bus Ship Power System

    Institute of Scientific and Technical Information of China (English)

    张志; 彭晓涛; 李晓宁; 吴振辉; 孙元章

    2013-01-01

    To facilitate engineering calculation and improve computational accuracy, based on traditional short-circuit calculation methods a main bus-bar based improved algorithm for multi-bus ship power system is proposed. The basic thinking of the proposed algorithm lies in following:when short-circuit fault occurred at one of generator sides, through the equivalence the cable impedances between bus-bars is transferred to generator branch and motor branches connected to opposite bus-bar, thus the influence of main bus-bar on short-circuit current is incorporated in the current that is fed from generator to the short-circuit point. The proposed improved algorithm is simulated by PSCAD, and the simulation results are compared with calculation results by traditional short-circuit current calculation method, and comparison result shows that the proposed calculation method is accurate and effective.%  为便于工程计算,提高计算精度,在传统短路电流计算方法的基础上,提出了基于多母线主汇流排的改进算法。通过对母线间电缆阻抗等效,再将其转移至故障点对侧母线的发电机支路和电动机支路,将其对短路电流的影响归于由发电机馈送至短路点的电流。通过与PSCAD仿真环境下的结果进行比较,证明了改进算法的正确性和有效性。

  7. An Overview of Staged-bus Operation in Cities

    Directory of Open Access Journals (Sweden)

    Mohammad Hesam Hafezi

    2014-02-01

    Full Text Available In developing countries, demand for passenger travel is higher, due to economic growth. Government policy encourages people to use public transportation instead of their private carsto reduce of traffic congestion and air pollution. In the city areas, bus networks are the major part of the public transportation system because they are easily accessible and cheaper compared to other types of public transportation. In this study revelation of details of bus operation included different agents is studied. Bus operations, during provision of their service, have interaction with three main agents: bus agent, passenger agent and traffic agent. Study of the influence of each agent in bus operation is presented in this study, using the macroscopic way.

  8. Research on the Coordinated Design of Bus and Taxi Station

    Directory of Open Access Journals (Sweden)

    Jiangfeng Xi

    2015-01-01

    Full Text Available Rises in the number of transit buses, bus routes, and overall traffic volume in China’s cities, coupled with interference from other transport modes, such as taxis loading and unloading passengers nearby, have led to increasing traffic delays at bus stops, which is considered one of the factors degrading service levels and traffic operations on urban roadways. This paper studies traffic characteristics at bus stops, investigates variations in delay from different types or designs of bus stops, and analyzes the impact of it on traffic capacity, the purpose of which is to propose a solution to predicting the feasibility of an integrated design of bus stops and taxi stands with the help of mathematical models and based on the objectives of optimal traffic operations and passenger transfer.

  9. Improved design of HIRFL-CSR EVME bus controller

    International Nuclear Information System (INIS)

    The EVME bus controller which is a key component of the HIRFL-CSR control system was improved. Besides reconfiguring the embedded Linux, a utility program was developed for data exchange between the controller and the database. The bus controller is based on ARM920T(ARM9) micro processor which is BGA packaged. The bus controller has the universal interface of VGA display, keyboard, and mouse. The backboard interface logic is programmed in an in-system configurable FPGA device. The bus can drive high current up to 64 mA, with the flexibility of the programmable signal definitions. All the improved performance helped the EVME bus controller play a crucial role in HIRFL-CSR control system. (authors)

  10. Low back trouble among urban bus drivers in Denmark

    DEFF Research Database (Denmark)

    Netterstrøm, Bo; Juel, K

    1989-01-01

    The occurrence of low back trouble and possible connection with psychosocial conditions among urban bus drivers were studied using a questionnaire and subsequent registration of hospital discharges. 2,045 (83%) full-time male bus drivers in the three largest cities in Denmark answered a questionn......The occurrence of low back trouble and possible connection with psychosocial conditions among urban bus drivers were studied using a questionnaire and subsequent registration of hospital discharges. 2,045 (83%) full-time male bus drivers in the three largest cities in Denmark answered...... a questionnaire in 1978 regarding psychosocial factors and health. The prevalence of frequent low back pain was 57%. In a control group of 195 motormen the prevalence was 40%. Standardized Morbidity Ratio for bus drivers discharged from hospital during the period 1978-1984 with the diagnosis lumbar disc...

  11. Nuclearly encoded splicing factors implicated in RNA splicing in higher plant organelles.

    Science.gov (United States)

    de Longevialle, Andéol Falcon; Small, Ian D; Lurin, Claire

    2010-07-01

    Plant organelles arose from two independent endosymbiosis events. Throughout evolutionary history, tight control of chloroplasts and mitochondria has been gained by the nucleus, which regulates most steps of organelle genome expression and metabolism. In particular, RNA maturation, including RNA splicing, is highly dependent on nuclearly encoded splicing factors. Most introns in organelles are group II introns, whose catalytic mechanism closely resembles that of the nuclear spliceosome. Plant group II introns have lost the ability to self-splice in vivo and require nuclearly encoded proteins as cofactors. Since the first splicing factor was identified in chloroplasts more than 10 years ago, many other proteins have been shown to be involved in splicing of one or more introns in chloroplasts or mitochondria. These new proteins belong to a variety of different families of RNA binding proteins and provide new insights into ribonucleo-protein complexes and RNA splicing machineries in organelles. In this review, we describe how splicing factors, encoded by the nucleus and targeted to the organelles, take part in post-transcriptional steps in higher plant organelle gene expression. We go on to discuss the potential for these factors to regulate organelle gene expression.

  12. Niobium in engineering bar steels

    International Nuclear Information System (INIS)

    The use of niobium as a microalloying addition to hot rolled and cold finished bars offers many opportunities to achieve enhanced mechanical properties in a very cost effective manner. By the addition of niobium (sometimes in combination with vanadium) to selected carbon steel grades, it is possible to produce hot rolled bars with minimum yield strengths up to 689 MPa (100 ksi) and cold finished bars with yield strengths up to 1035 MPa (150 ksi). These high-strength-low-alloy bars have a myriad of applications particularly for automotive parts such as shafts, stabilizer bars, tie rods, piston rods, fasteners such as U-bolts, brackets, and various transmission parts. Of particular value has been the specification of Nb-microalloyed steels for such hot forgings as connecting rods and caps, and weld yokes a situation which has permitted elimination of post-forging heat treatment (quenching and tempering). Significant reductions in cost and energy consumption have been realized

  13. Bars in Cuspy Dark Halos

    CERN Document Server

    Dubinski, John; Shlosman, Isaac

    2008-01-01

    We examine the bar instability in models with an exponential disk and a cuspy NFW-like dark matter (DM) halo inspired by cosmological simulations. Bar evolution is studied as a function of numerical resolution in a sequence of models spanning 10K to 100M DM particles - including a multi-mass model with an effective resolution of 10G. The goal is to find convergence in dynamical behaviour. We characterize the bar growth, the buckling instability, pattern speed decay through resonant transfer of angular momentum, and possible destruction of the DM halo cusp. Overall, most characteristics converge in behaviour in detail for halos containing more than 10M particles. Notably, the formation of the bar does not destroy the density cusp in this case. These higher resolution simulations clearly illustrate the importance of discrete resonances in transporting angular momentum from the bar to the halo.

  14. Regulation of mammalian pre-mRNA splicing

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    In eukaryotes,most protein-coding genes contain introns which are removed by precursor messenger RNA(pre-mRNA) splicing.Alternative splicing is a process by which multiple messenger RNAs(mRNAs) are generated from a single pre-mRNA,resulting in functionally distinct proteins.Recent genome-wide analyses of alternative splicing indicated that in higher eukaryotes alternative splicing is an important mechanism that generates proteomic complexity and regulates gene expression.Mis-regulation of splicing causes a wide range of human diseases.This review describes the current understanding of pre-mRNA splicing and the mechanisms that regulate mammalian pre-mRNA splicing.It also discusses emerging directions in the field of alternative splicing.

  15. Altered PLP1 splicing causes hypomyelination of early myelinating structures

    DEFF Research Database (Denmark)

    Kevelam, Sietske H; Taube, Jennifer R; van Spaendonk, Rosalina M L;

    2015-01-01

    for causal mutations. In silico analysis of effects of the mutations on splicing and RNA folding was performed. In vitro gene splicing was examined in RNA from patients' fibroblasts and an immortalized immature oligodendrocyte cell line after transfection with mutant minigene splicing constructs. RESULTS......: All patients had unusual hemizygous mutations of PLP1 located in exon 3B (one deletion, one missense and two silent), which is spliced out in isoform DM20, or in intron 3 (five mutations). The deletion led to truncation of PLP1, but not DM20. Four mutations were predicted to affect PLP1/DM20...... alternative splicing by creating exonic splicing silencer motifs or new splice donor sites or by affecting the local RNA structure of the PLP1 splice donor site. Four deep intronic mutations were predicted to destabilize a long-distance interaction structure in the secondary PLP1 RNA fragment involved...

  16. Regulation of mammalian pre-mRNA splicing

    Institute of Scientific and Technical Information of China (English)

    HUI JingYi

    2009-01-01

    In eukaryotes, most protein-coding genes contain introns which are removed by precursor messenger RNA (pre-mRNA) splicing. Alternative splicing is a process by which multiple messenger RNAs (mRNAs) are generated from a single pre-mRNA, resulting in functionally distinct proteins. Recent genome-wide analyses of alternative splicing indicated that in higher eukaryotes alternative splicing is an important mechanism that generates proteomic complexity and regulates gene expression. Mis-regulation of splicing causes a wide range of human diseases. This review describes the current understanding of pre-mRNA splicing and the mechanisms that regulate mammalian pre-mRNA splicing. It also discusses emerging directions in the field of alternative splicing.

  17. A study of alternative splicing in the pig

    DEFF Research Database (Denmark)

    Hillig, Ann-Britt Nygaard; Cirera Salicio, Susanna; Gilchrist, Michael J.;

    2010-01-01

    BACKGROUND: Since at least half of the genes in mammalian genomes are subjected to alternative splicing, alternative pre-mRNA splicing plays an important contribution to the complexity of the mammalian proteome. Expressed sequence tags (ESTs) provide evidence of a great number of possible...... and mouse, we find putative splice variants in about 30% of the contigs with more than 50 ESTs. Based on the criteria that a minimum of two EST sequences confirmed each splice event, a list of 100 genes with the most distinct tissue-specific alternative splice events was generated from the list...... of candidates. To confirm the tissue specificity of the splice events, 10 genes with functional annotation were randomly selected from which 16 individual splice events were chosen for experimental verification by quantitative PCR (qPCR). Six genes were shown to have tissue specific alternatively spliced...

  18. Capillary Electrophoresis Analysis of Conventional Splicing Assays

    DEFF Research Database (Denmark)

    de Garibay, Gorka Ruiz; Acedo, Alberto; García-Casado, Zaida;

    2014-01-01

    Rare sequence variants in "high-risk" disease genes, often referred as unclassified variants (UVs), pose a serious challenge to genetic testing. However, UVs resulting in splicing alterations can be readily assessed by in vitro assays. Unfortunately, analytical and clinical interpretation...... of these assays is often challenging. Here, we explore this issue by conducting splicing assays in 31 BRCA2 genetic variants. All variants were assessed by RT-PCR followed by capillary electrophoresis and direct sequencing. If assays did not produce clear-cut outputs (Class-2 or Class-5 according to analytical...... International Agency for Research on Cancer guidelines), we performed qPCR and/or minigene assays. The latter were performed with a new splicing vector (pSAD) developed by authors of the present manuscript (patent #P201231427 CSIC). We have identified three clinically relevant Class-5 variants (c.682-2A>G, c...

  19. Splicing variants of porcine synphilin-1

    DEFF Research Database (Denmark)

    Larsen, Knud Erik; Madsen, Lone Bruhn; Farajzadeh, Leila;

    2015-01-01

    %) and to mouse (84%) synphilin-1. Three shorter transcript variants of the synphilin-1 gene were identified, all lacking one or more exons. SNCAIP transcripts were detected in most examined organs and tissues and the highest expression was found in brain tissues and lung. Conserved splicing variants and a novel......RNA was investigated by RNAseq. The presented work reports the molecular cloning and characterization of the porcine (Sus scrofa) synphilin-1 cDNA (SNCAIP) and three splice variants hereof. The porcine SNCAIP cDNA codes for a protein (synphilin-1) of 919 amino acids which shows a high similarity to human (90...... splice form of synhilin-1 were found in this study. All synphilin-1 isoforms encoded by the identified transcript variants lack functional domains important for protein degradation....

  20. Galaxy Zoo: CANDELS Barred Disks and Bar Fractions

    CERN Document Server

    Simmons, B D; Lintott, Chris; Masters, Karen L; Willett, Kyle W; Keel, William C; Smethurst, R J; Cheung, Edmond; Nichol, Robert C; Schawinski, Kevin; Rutkowski, Michael; Kartaltepe, Jeyhan S; Bell, Eric F; Casteels, Kevin R V; Conselice, Christopher J; Almaini, Omar; Ferguson, Henry C; Fortson, Lucy; Hartley, William; Kocevski, Dale; Koekemoer, Anton M; McIntosh, Daniel H; Mortlock, Alice; Newman, Jeffrey A; Ownsworth, Jamie; Bamford, Steven; Dahlen, Tomas; Faber, Sandra M; Finkelstein, Steven L; Fontana, Adriano; Galametz, Audrey; Grogin, N A; Grutzbauch, Ruth; Guo, Yicheng; Haussler, Boris; Jek, Kian J; Kaviraj, Sugata; Lucas, Ray A; Peth, Michael; Salvato, Mara; Wiklind, Tommy; Wuyts, Stijn

    2014-01-01

    The formation of bars in disk galaxies is a tracer of the dynamical maturity of the population. Previous studies have found that the incidence of bars in disks decreases from the local Universe to z ~ 1, and by z > 1 simulations predict that bar features in dynamically mature disks should be extremely rare. Here we report the discovery of strong barred structures in massive disk galaxies at z ~ 1.5 in deep rest-frame optical images from CANDELS. From within a sample of 876 disk galaxies identified by visual classification in Galaxy Zoo, we identify 123 barred galaxies. Selecting a sub-sample within the same region of the evolving galaxy luminosity function (brighter than L*), we find that the bar fraction across the redshift range 0.5< z < 2 (f_bar = 10.7 +6.3 -3.5% after correcting for incompleteness) does not significantly evolve. We discuss the implications of this discovery in the context of existing simulations and our current understanding of the way disk galaxies have evolved over the last 11 bil...

  1. Regulation of alternative splice site selection by reversible protein phosphorylation

    OpenAIRE

    Novoyatleva, Tatyana

    2007-01-01

    Splicing is the process that removes introns and joins exons from pre-mesenger RNA (pre-mRNA). It is an essential step in pre-mRNA processing that form the mature RNA. Microarray data indicates that approximately 75% of human genes produce transcripts that are alternatively spliced. Alternative splicing is one of the major mechanisms that ultimately generate high number of protein isoforms from a limited number of genes. The proper catalysis and regulation of alternative splice site selection...

  2. Progress toward therapy with antisense-mediated splicing modulation

    OpenAIRE

    Du, Liutao; Gatti, Richard A.

    2009-01-01

    Antisense oligonucleotides (AO) or antisense RNA can complementarily bind to a target site in pre-mRNA and regulate gene splicing, either to restore gene function by reprogramming gene splicing or to inhibit gene expression by disrupting splicing. These two applications represent novel therapeutic strategies for several types of diseases such as genetic disorders, cancers and infectious diseases. In this review, the recent developments and applications of antisense-mediated splicing modulatio...

  3. Cotranscriptional splicing efficiency differs dramatically between Drosophila and mouse

    OpenAIRE

    Khodor, Yevgenia L.; Menet, Jerome S; Tolan, Michael; Rosbash, Michael

    2012-01-01

    Spliceosome assembly and/or splicing of a nascent transcript may be crucial for proper isoform expression and gene regulation in higher eukaryotes. It has been shown that cotranscriptional splicing occurs efficiently in Drosophila, but there are not comparable genome-wide nascent splicing data from mammals. To provide this comparison, the authors analyzed a recently generated, high-throughput sequencing data set of mouse liver nascent RNA. Cotranscriptional splicing is approximately twofold l...

  4. Alternative splicing of DNA damage response genes and gastrointestinal cancers

    OpenAIRE

    Rahmutulla, Bahityar; Matsushita, Kazuyuki; Nomura, Fumio

    2014-01-01

    Alternative splicing, which is a common phenomenon in mammalian genomes, is a fundamental process of gene regulation and contributes to great protein diversity. Alternative splicing events not only occur in the normal gene regulation process but are also closely related to certain diseases including cancer. In this review, we briefly demonstrate the concept of alternative splicing and DNA damage and describe the association of alternative splicing and cancer pathogenesis, focusing on the pote...

  5. RNA structure and the mechanisms of alternative splicing

    OpenAIRE

    McManus, C. Joel; Graveley, Brenton R.

    2011-01-01

    Alternative splicing is a widespread means of increasing protein diversity and regulating gene expression in eukaryotes. Much progress has been made in understanding the proteins involved in regulating alternative splicing, the sequences they bind to, and how these interactions lead to changes in splicing patterns. However, several recent studies have identified other players involved in regulating alternative splicing. A major theme emerging from these studies is that RNA secondary structure...

  6. Evolution of alternative splicing in primate brain transcriptomes

    OpenAIRE

    Lin, Lan; Shen, Shihao; Jiang, Peng; Sato, Seiko; Davidson, Beverly L.; Xing, Yi

    2010-01-01

    Alternative splicing is a predominant form of gene regulation in higher eukaryotes. The evolution of alternative splicing provides an important mechanism for the acquisition of novel gene functions. In this work, we carried out a genome-wide phylogenetic survey of lineage-specific splicing patterns in the primate brain, via high-density exon junction array profiling of brain transcriptomes of humans, chimpanzees and rhesus macaques. We identified 509 genes showing splicing differences among t...

  7. Functional and evolutionary analysis of alternatively spliced genes is consistent with an early eukaryotic origin of alternative splicing

    DEFF Research Database (Denmark)

    Irimia, Manuel; Rukov, Jakob Lewin; Penny, David;

    2007-01-01

    , and may therefore predate multicellularity, is still unknown. To better understand the origin and evolution of alternative splicing and its usage in diverse organisms, we studied alternative splicing in 12 eukaryotic species, comparing rates of alternative splicing across genes of different functional...... classes, cellular locations, intron/exon structures and evolutionary origins. RESULTS: For each species, we find that genes from most functional categories are alternatively spliced. Ancient genes (shared between animals, fungi and plants) show high levels of alternative splicing. Genes with products...... expressed in the nucleus or plasma membrane are generally more alternatively spliced while those expressed in extracellular location show less alternative splicing. We find a clear correspondence between incidence of alternative splicing and intron number per gene both within and between genomes. In general...

  8. Approaches to link RNA secondary structures with splicing regulation

    DEFF Research Database (Denmark)

    Plass, Mireya; Eyras, Eduardo

    2014-01-01

    by facilitating or hindering the interaction with factors and small nuclear ribonucleoproteins (snRNPs) that regulate splicing. Moreover, the secondary structure could play a fundamental role in the splicing of yeast species, which lack many of the regulatory splicing factors present in metazoans. This chapter...

  9. Schizophyllum commune has an extensive and functional alternative splicing repertoire

    Science.gov (United States)

    Gehrmann, Thies; Pelkmans, Jordi F.; Lugones, Luis G.; Wösten, Han A. B.; Abeel, Thomas; Reinders, Marcel J. T.

    2016-01-01

    Recent genome-wide studies have demonstrated that fungi possess the machinery to alternatively splice pre-mRNA. However, there has not been a systematic categorization of the functional impact of alternative splicing in a fungus. We investigate alternative splicing and its functional consequences in the model mushroom forming fungus Schizophyllum commune. Alternative splicing was demonstrated for 2,285 out of 12,988 expressed genes, resulting in 20% additional transcripts. Intron retentions were the most common alternative splicing events, accounting for 33% of all splicing events, and 43% of the events in coding regions. On the other hand, exon skipping events were rare in coding regions (1%) but enriched in UTRs where they accounted for 57% of the events. Specific functional groups, including transcription factors, contained alternatively spliced genes. Alternatively spliced transcripts were regulated differently throughout development in 19% of the 2,285 alternatively spliced genes. Notably, 69% of alternatively spliced genes have predicted alternative functionality by loss or gain of functional domains, or by acquiring alternative subcellular locations. S. commune exhibits more alternative splicing than any other studied fungus. Taken together, alternative splicing increases the complexity of the S. commune proteome considerably and provides it with a rich repertoire of alternative functionality that is exploited dynamically. PMID:27659065

  10. 46 CFR 111.60-19 - Cable splices.

    Science.gov (United States)

    2010-10-01

    ... with section 25.11 of IEEE 45-2002 (incorporated by reference; see 46 CFR 110.10-1). ... 46 Shipping 4 2010-10-01 2010-10-01 false Cable splices. 111.60-19 Section 111.60-19 Shipping... REQUIREMENTS Wiring Materials and Methods § 111.60-19 Cable splices. (a) A cable must not be spliced in...

  11. 30 CFR 75.603 - Temporary splice of trailing cable.

    Science.gov (United States)

    2010-07-01

    ... 30 Mineral Resources 1 2010-07-01 2010-07-01 false Temporary splice of trailing cable. 75.603... SAFETY AND HEALTH MANDATORY SAFETY STANDARDS-UNDERGROUND COAL MINES Trailing Cables § 75.603 Temporary splice of trailing cable. One temporary splice may be made in any trailing cable. Such trailing cable...

  12. Repairing and strengthening a fractured Hader bar.

    Science.gov (United States)

    Herrero, D B

    1997-01-01

    Stresses from occlusion and metal fatigue over time can cause fracture of overdenture retention bars. Often failure of the bar necessitates the removal and remake of the bar. This may damage the abutment, especially if there are dowel posts involved. This article describes a method for reinforcing the existing bar without having to remove the bar or significantly alter the overdenture. The fractured bar can be prepared in the mouth to receive a reinforcing superstructure that will be cemented.

  13. The wheels on the bus go "buy buy buy": school bus advertising laws.

    Science.gov (United States)

    Pomeranz, Jennifer L

    2012-09-01

    School buses, a practical necessity for millions of children, are at the center of new efforts to raise revenue. School bus advertising laws bring public health and commercialization concerns to the school setting. In doing so, they potentially expose school districts to First Amendment lawsuits. I examined various school bus advertising bills and laws. I reviewed First Amendment "forum analysis" as applied in the transit and school settings to clarify how this legal test may affect school districts subject to such laws. I have made recommendations for school districts to enact appropriate policies to ensure that such advertising does not undermine public health and to enable the districts to maintain control over their property.

  14. SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis

    OpenAIRE

    Liu Hongfang; Ryan Michael C; Kahn Ari B; Zeeberg Barry R; Jamison D Curtis; Weinstein John N

    2007-01-01

    Abstract Background There are many fewer genes in the human genome than there are expressed transcripts. Alternative splicing is the reason. Alternatively spliced transcripts are often specific to tissue type, developmental stage, environmental condition, or disease state. Accurate analysis of microarray expression data and design of new arrays for alternative splicing require assessment of probes at the sequence and exon levels. Description SpliceMiner is a web interface for querying Evidenc...

  15. The epithelial splicing factors ESRP1 and ESRP2 positively and negatively regulate diverse types of alternative splicing events

    OpenAIRE

    Warzecha, Claude C.; Shen, Shihao; Xing, Yi; Carstens, Russ P.

    2009-01-01

    Cell-type and tissue-specific alternative splicing events are regulated by combinatorial control involving both abundant RNA binding proteins as well as those with more discrete expression and specialized functions. Epithelial Splicing Regulatory Proteins 1 and 2 (ESRP1 and ESRP2) are recently discovered epithelial-specific RNA binding proteins that promote splicing of the epithelial variant of the FGFR2, ENAH, CD44 and CTNND1 transcripts. To catalogue a larger set of splicing events under th...

  16. Blurring in bar code signals

    Science.gov (United States)

    Tang, Hong

    1997-10-01

    When a bar code symbol is passed over a scanner, it is struck across by a fast moving laser beam. The laser light is scattered by the bar code. The total scattered power is modulated by the reflectivity of the bars and spaces in the symbol. A fraction of the scattered light is collected and focused onto a photodetector that converts the light variation into an electronic signal. The electronic signal is then digitized for analysis by a computer. The scanning and detection process can be modeled by a convolution of the laser beam profile and the bar code reflectivity function. The switching between states in the digitized bar code signal, which represents transitions from a space to a bar or vice versa, is determined by a zero-crossing point in the second derivative of the analog signal. The laser profile acts like a smoothing function. It blurs the analog electronic signal. If the width of the laser profile is less than the minimum width of bars and spaces in the bar code reflectivity function, the transition point is not affected by the location of its neighboring edges. If the laser profile is wider than the minimum width in the bar code, the transition point can be shifted due to the locations of its neighboring edges. The behavior of the shift of transition is analyzed here for all cases in a UPC symbol. It is found that the amount of shift in the transition point is almost the same for several different cases within the depth of field of the scanner. The knowledge of the behavior of transition point shift can be used to accurately compensate printing errors in an over-printed bar code. The modulation transfer function (MTF) of bar code scanning is the Fourier transform of the marginal function of the scanning laser beam. The MTF through focus for a scanning system is presented. By using an aperture with central obscuration in the laser focusing system, the high frequency resolution of bar code scanning can be enhanced and the depth of field of the scanner can

  17. Auxiliary splice factor U2AF26 and transcription factor Gfi1 cooperate directly in regulating CD45 alternative splicing.

    NARCIS (Netherlands)

    Heyd, F.; Dam, G.B. ten; Moroy, T.

    2006-01-01

    By alternative splicing, different isoforms of the transmembrane tyrosine phosphatase CD45 are generated that either enhance or limit T cell receptor signaling. We report here that CD45 alternative splicing is regulated by cooperative action of the splice factor U2AF26 and the transcription factor G

  18. Alternative-splicing-mediated gene expression

    Science.gov (United States)

    Wang, Qianliang; Zhou, Tianshou

    2014-01-01

    Alternative splicing (AS) is a fundamental process during gene expression and has been found to be ubiquitous in eukaryotes. However, how AS impacts gene expression levels both quantitatively and qualitatively remains to be fully explored. Here, we analyze two common models of gene expression, each incorporating a simple splice mechanism that a pre-mRNA is spliced into two mature mRNA isoforms in a probabilistic manner. In the constitutive expression case, we show that the steady-state molecular numbers of two mature mRNA isoforms follow mutually independent Poisson distributions. In the bursting expression case, we demonstrate that the tail decay of the steady-state distribution for both mature mRNA isoforms that in general are not mutually independent can be characterized by the product of mean burst size and splicing probability. In both cases, we find that AS can efficiently modulate both the variability (measured by variance) and the noise level of the total mature mRNA, and in particular, the latter is always lower than the noise level of the pre-mRNA, implying that AS always reduces the noise. These results altogether reveal that AS is a mechanism of efficiently controlling the gene expression noise.

  19. Swisstrolley 3 - An articulated trolley bus; SWISSTROLLEY 3. Gelenktrolleybus

    Energy Technology Data Exchange (ETDEWEB)

    Gisler, H.-J.

    2006-07-01

    This illustrated final report for the Swiss Federal Office of Energy (SFOE) takes a look at the Swisstrolley 3 low-floor, articulated trolley bus developed in Switzerland by the Hess AG company. Various features of the variants of the trolley bus, including single vehicle, single and double-articulated buses and bus trailers, are discussed. The reductions achieved in energy consumption, weight and noise are discussed. Typical values for power consumption are presented in graphical form. Economic viability and passenger-friendliness are examined, as are possibilities for further improvement.

  20. Statistical Analysis for the Driving Cycle of Beijing's Bus

    Institute of Scientific and Technical Information of China (English)

    王震坡; 孙逢春; 王军; 孙立清

    2004-01-01

    According to the test data of the driving model for Beijing's bus routes, 9 parameters and the actual values of Beijing bus are confirmed to evaluate the driving cycle, 2 ways of establishing driving cycle model are analyzed, the formula of calculating driving cycle is acquired, and the calculating driving cycle model and the statistical driving cycle model for the buses in Beijing urban areas are set up. This study provides scientific basis for selecting the bus type and confirming the design parameters and the running method in Beijing.

  1. Development in Conducting Bus of RE-Al Alloys

    Institute of Scientific and Technical Information of China (English)

    李德富; 胡捷; 章萍芝; 石瑛; 李彦利

    2001-01-01

    Four kinds of deformed aluminum alloys were tested. One kind of RE-A1-Mg-Si alloy, which possessed high conductivity and strength, was the first priority by contrast test, The large specification bus of conducting aluminum all oys was made by thermomechanical process during the industrial experiment. The properties of the bus are as follows:the tensile strength σb is 238 MPa, the conductivity (v.s. IACS) is 54.3%, and the current-carrying capacity is beyond 3.1kA during working process. This kind of RE-Al alloy bus has been applied to several electrical transmitting and transforming work.

  2. A new MV bus transfer scheme for nuclear power plants

    Directory of Open Access Journals (Sweden)

    Chang Choong-Koo

    2015-01-01

    Full Text Available Fast bus transfer method is the most popular and residual voltage transfer method that is used as a backup in medium voltage buses in general. The use of the advanced technology like open circuit voltage prediction and digital signal processing algorithms can improve the reliability of fast transfer scheme. However, according to the survey results of the recent operation records in nuclear power plants, there were many instances where the fast transfer scheme has failed. To assure bus transfer in any conditions and circumstances, uninterruptible bus transfer scheme utilizing the state of the art medium voltage UPS is discussed and elaborated.

  3. Single Mode Fiber Optic Connectors And Splices

    Science.gov (United States)

    Woods, John G.

    1984-08-01

    There is a trend toward increasing use of single mode transmission, particularly in telecommunications where high data bit rates are transmitted for long distances. Inter-connections of multimode fibers can be made in a number of ways, using ferrules, v-grooves, elastomeric splices, etc. However, the connection of single mode fibers, which have core diameters of 4 to 13 μm, requires more precise alignment than do the multimode fibers having core diameters of 50 μm or more. At TRW, we have adapted the four rod alignment guide concept for single mode fiber inter-connections. The principle of this OPTAGUIDE* alignment guide is presented. The single mode connectors and splices use the four rod scheme with an index matching material to eliminate or reduce the losses incurred through fiber end roughness or angularity. We are able to produce demountable connectors for 80/4.4 pm fibers having typical insertion losses of 1.0dB. The main factors in obtaining this result are the naturally precise fiber alignment provided by the alignment guide, and the ability of several manufacturers to maintain tight diametral and core offset tolerances. The single mode OPTALIGN* SM Connectors have been subjected to performance and environmental tests including repeated matings, temperature cycle and vibration. The results of these tests are described in this paper. A feature of the OPTALIGN* SM Connectors is the relative ease and speed of attachment to fiber optic cable in the field, without the use of epoxy or polishing procedures. The alignment guide concept has also been applied to permanent single mode splices. The splicing procedure is simple to perform in the field without expensive or delicate equipment. Construction and assembly procedures of the demountable connectors and permanent splices will be described with the aid of diagrams and photographs.

  4. Deregulation of splicing factors and breast cancer development.

    Science.gov (United States)

    Silipo, Marco; Gautrey, Hannah; Tyson-Capper, Alison

    2015-10-01

    It is well known that many genes implicated in the development and progression of breast cancer undergo aberrant alternative splicing events to produce proteins with pro-cancer properties. These changes in alternative splicing can arise from mutations or single-nucleotide polymorphisms (SNPs) within the DNA sequences of cancer-related genes, which can strongly affect the activity of splicing factors and influence the splice site choice. However, it is important to note that absence of mutations is not sufficient to prevent misleading choices in splice site selection. There is now increasing evidence to demonstrate that the expression profile of ten splicing factors (including SRs and hnRNPs) and eight RNA-binding proteins changes in breast cancer cells compared with normal cells. These modifications strongly influence the alternative splicing pattern of many cancer-related genes despite the absence of any detrimental mutations within their DNA sequences. Thus, a comprehensive assessment of the splicing factor status in breast cancer is important to provide insights into the mechanisms that lead to breast cancer development and metastasis. Whilst most studies focus on mutations that affect alternative splicing in cancer-related genes, this review focuses on splicing factors and RNA-binding proteins that are themselves deregulated in breast cancer and implicated in cancer-related alternative splicing events.

  5. Triply heavy tetraquark states with the $QQ\\bar{Q}\\bar{q}$ configuration

    CERN Document Server

    Chen, Kan; Wu, Jing; Liu, Yan-Rui; Zhu, Shi-Lin

    2016-01-01

    In the framework of the color-magnetic interaction, we systematically investigate the mass splittings of the $QQ\\bar{Q}\\bar{q}$ tetraquark states and estimated their rough masses in this work. These systems include the explicitly exotic states $cc\\bar{b}\\bar{q}$ and $bb\\bar{c}\\bar{q}$ and the hidden exotic states $cc\\bar{c}\\bar{q}$, $cb\\bar{b}\\bar{q}$, $bc\\bar{c}\\bar{q}$, and $bb\\bar{b}\\bar{q}$. If a state around the estimated mass region could be observed, its nature as a genuine tetraquark is favored. The strong decay patterns shown here will be helpful to the experimental search for these exotic states.

  6. Strength Degradation of Gfrp Bars

    OpenAIRE

    Bhise, Vikrant Sudhakar

    2002-01-01

    The primary objective of this research was to examine the strength degradation of Glass Fiber Reinforced Polymer (GFRP) bars at high temperature and alkalinity and determine if an Arrhenius type relationship can be used as a means of projecting life. The work done includes a thorough literature review, experiments and development of strength prediction models. The experimental work involves exposure of GFRP bars incased in cement mortar to lime-water solution at 30, 45 and 57°C. Overall 100 ...

  7. Multiprobe quantum spin Hall bars

    OpenAIRE

    Sanvito, Stefano

    2013-01-01

    PUBLISHED We analyze electron transport in multiprobe quantum spin Hall (QSH) bars using the B¨uttiker formalism and draw parallels with their quantum Hall (QH) counterparts. We find that in a QSH bar the measured resistance changes upon introducing side voltage probes, in contrast to the QH case. We also study four- and six-terminal geometries and derive the expressions for the resistances. For these our analysis is generalized from the single-channel to the multi-channel case...

  8. Nanoporosity of Si (100) bars

    Science.gov (United States)

    Novikov, S. N.; Timoshenkov, S. P.; Minaev, V. S.; Goryunova, E. P.; Gerasimenko, N. N.; Smirnov, D. I.

    2016-09-01

    Si(100) samples cut from a typical bar (100 mm in diameter) prepared using industrial technology are studied. Measurements of the electron work function (EWF) show that the size effects in these samples (a reduction in thickness along with a sample's area and the EWF) detected earlier were due to nanostructure porosity that was buried by the technological treatment of a bar's surface. This hidden nanoporosity is assumed to be a manifestation of the secondary crystal structure.

  9. Barred disks in dense environments

    CERN Document Server

    Marinova, I; Heiderman, A; Barazza, F D; Gray, M E; Barden, M; Wolf, C; Peng, C Y; Bacon, D; Balogh, M; Bell, E F; Bohm, A; Caldwell, J A R; Haussler, B; Heymans, C; Jahnke, K; van Kampen, E; Koposov, S; Lane, K; McIntosh, D H; Meisenheimer, K; Rix, H -W; Sanchez, S F; Taylor, A; Wisotzki, L; Zheng, X

    2010-01-01

    We investigate the properties of bright (MV <= -18) barred and unbarred disks in the Abell 901/902 cluster system at z~0.165 with the STAGES HST ACS survey. To identify and characterize bars, we use ellipse-fitting. We use visual classification, a Sersic cut, and a color cut to select disk galaxies, and find that the latter two methods miss 31% and 51%, respectively of disk galaxies identified through visual classification. This underscores the importance of carefully selecting the disk sample in cluster environments. However, we find that the global optical bar fraction in the clusters is ~30% regardless of the method of disk selection. We study the relationship of the optical bar fraction to host galaxy properties, and find that the optical bar fraction depends strongly on the luminosity of the galaxy and whether it hosts a prominent bulge or is bulgeless. Within a given absolute magnitude bin, the optical bar fraction increases for galaxies with no significant bulge component. Within each morphological ...

  10. Common Traffic Violations of Bus Drivers in Urban China: An Observational Study

    OpenAIRE

    Qiqi Wang; , Wei Zhang; Rendong Yang; Yuanxiu Huang; Lin Zhang; Peishan Ning; Xunjie Cheng; Schwebel, David C; Guoqing Hu; Hongyan Yao

    2015-01-01

    Objective To report common traffic violations in bus drivers and the factors that influence those violations in urban China. Methods We conducted an observational study to record three types of traffic violations among bus drivers in Changsha City, China: illegal stopping at bus stations, violating traffic light signals, and distracted driving. The behaviors of bus drivers on 32 routes (20% of bus routes in the city) were observed. A two-level Poisson regression examined factors that predicte...

  11. Sequence-specific flexibility organization of splicing flanking sequence and prediction of splice sites in the human genome.

    Science.gov (United States)

    Zuo, Yongchun; Zhang, Pengfei; Liu, Li; Li, Tao; Peng, Yong; Li, Guangpeng; Li, Qianzhong

    2014-09-01

    More and more reported results of nucleosome positioning and histone modifications showed that DNA structure play a well-established role in splicing. In this study, a set of DNA geometric flexibility parameters originated from molecular dynamics (MD) simulations were introduced to discuss the structure organization around splice sites at the DNA level. The obtained profiles of specific flexibility/stiffness around splice sites indicated that the DNA physical-geometry deformation could be used as an alternative way to describe the splicing junction region. In combination with structural flexibility as discriminatory parameter, we developed a hybrid computational model for predicting potential splicing sites. And the better prediction performance was achieved when the benchmark dataset evaluated. Our results showed that the mechanical deformability character of a splice junction is closely correlated with both the splice site strength and structural information in its flanking sequences.

  12. Rfid-Based Automatic Bus Ticketing: Features and Trends

    Science.gov (United States)

    Oudah, A.

    2016-02-01

    Recent advancements in various technologies have made remarkable developments in various fields for public welfare and public transport is one such area. In the near future public bus transport system with advanced technologies like Radio Frequency Identification Device (RFID), GSM, GPS, ZigBee and RF modules will gain spotlight due to their advantage of higher convenience and greater life standards as compared to the conventional bus systems. In this paper, a comprehensive review of all several proposed bus ticketing and bus information methods has been presented in detail. The study brings out improved solution in terms of cost, convenience, user satisfaction and future implementation. The choice of working modules and their efficient performance has been discussed along with the highlighted importance of the need of technology for welfare of common public and visually impaired.

  13. Optimization Model for Headway of a Suburban Bus Route

    Directory of Open Access Journals (Sweden)

    Xiaohong Jiang

    2014-01-01

    Full Text Available Due to relatively low passenger demand, headways of suburban bus route are usually longer than those of urban bus route. Actually it is also difficult to balance the benefits between passengers and operators, subject to the service standards from the government. Hence the headway of a suburban bus route is usually determined on the empirical experience of transport planners. To cope with this problem, this paper proposes an optimization model for designing the headways of suburban bus routes by minimizing the operating and user costs. The user costs take into account both the waiting time cost and the crowding cost. The feasibility and validity of the proposed model are shown by applying it to the Route 206 in Jiangning district, Nanjing city of China. Weightages of passengers’ cost and operating cost are further discussed, considering different passenger flows. It is found that the headway and objective function are affected by the weightages largely.

  14. Optimal control system of the intermittent bus-only approach

    Institute of Scientific and Technical Information of China (English)

    Jie Jiang; Yulin Chang

    2014-01-01

    To guarantee bus priority with a minimum impact on car traffic at intersections, an optimal control system of the intermittent bus-only approach (IBA) was proposed. The problems of the existing system are first solved through optimization: the judgment time of the IBA system was advanced to allow a bus to jump car queues if the bus was detected to arrive at the intersection, and the instant that the IBA lane became available to cars was controlled dynamically to increase the capacity of the IBA lane. The total car delay in one cycle was then analyzed quantitatively when implementing the optimal control system. The results show that in comparison with the existing system of the IBA, the car delay is greatly reduced and the probability of a car stopping twice is low after optimizing the IBA system.

  15. Study on the Bus Real-time Dispatching Model

    Institute of Scientific and Technical Information of China (English)

    YingZou; JianguoLi; JianhuaHuang; ZhenminTang

    2004-01-01

    The real-time dispatching model on bus system is studied in this article. Realtime dispatching can resume the planned schedule quickly, and then to ensure the reliability of the public transport service and to well raise the service quality.

  16. Global Optimization for Bus Line Timetable Setting Problem

    Directory of Open Access Journals (Sweden)

    Qun Chen

    2014-01-01

    Full Text Available This paper defines bus timetables setting problem during each time period divided in terms of passenger flow intensity; it is supposed that passengers evenly arrive and bus runs are set evenly; the problem is to determine bus runs assignment in each time period to minimize the total waiting time of passengers on platforms if the number of the total runs is known. For such a multistage decision problem, this paper designed a dynamic programming algorithm to solve it. Global optimization procedures using dynamic programming are developed. A numerical example about bus runs assignment optimization of a single line is given to demonstrate the efficiency of the proposed methodology, showing that optimizing buses’ departure time using dynamic programming can save computational time and find the global optimal solution.

  17. Bus Passenger Recognition and Track of Video Sequence

    Directory of Open Access Journals (Sweden)

    Donghua Zhou

    2013-06-01

    Full Text Available Study on bus passenger recognition and track of video sequence is a research aiming at realizing making a statistics on passenger flow volume of bus, which not only helps traffic services center rationally schedule vehicles, but also can avoid overload. The system makes machine vision technology and digital image processing technique applied in customer counting of bus. The key questions in the study include effective collection of video image, effective extraction of moving object in sequence images, recognition of moving targets, trace and count of moving objects. The paper makes deep analysis on relevant technology from the perspective of the theory and practical application of the algorithm, and the study makes achievements. The theoretical algorithm for the study on bus passenger recognition and track of video sequence is distinctive. The practical experiments indicate that the system can satisfy the real-time requirements, and can accurately make statistics on the number of passengers, which has great application value.

  18. Field observations of nearshore bar formation

    DEFF Research Database (Denmark)

    Aagaard, Troels; Kroon, Aart; Greenwood, Brian;

    2008-01-01

      The formation of an inner nearshore bar was observed during a high-energy event at the sandy beach of Vejers, Denmark. The bar accreted in situ during surf zone conditions and the growth of the bar was associated with the development of a trough landward of the bar. Measurements of hydrodynamics...

  19. Examining the Optimal Fuel Type for Urban Bus Operations

    OpenAIRE

    CAULFIELD, BRIAN

    2010-01-01

    PUBLISHED Washington D.C. Public service fleets offer an attractive option for introducing renewable fuels and alternative technologies on a large scale, which allow for the reduction of both greenhouse gas emissions and exhaust air pollutants. This paper ex amines the use of biomethane (bio-CNG) and compressed natural gas (CNG) for part of the bus fleet in Dublin. Dublin is typical of many international urban centres with a large bus fleet; therefore the results...

  20. Compressed natural gas bus safety: a quantitative risk assessment.

    Science.gov (United States)

    Chamberlain, Samuel; Modarres, Mohammad

    2005-04-01

    This study assesses the fire safety risks associated with compressed natural gas (CNG) vehicle systems, comprising primarily a typical school bus and supporting fuel infrastructure. The study determines the sensitivity of the results to variations in component failure rates and consequences of fire events. The components and subsystems that contribute most to fire safety risk are determined. Finally, the results are compared to fire risks of the present generation of diesel-fueled school buses. Direct computation of the safety risks associated with diesel-powered vehicles is possible because these are mature technologies for which historical performance data are available. Because of limited experience, fatal accident data for CNG bus fleets are minimal. Therefore, this study uses the probabilistic risk assessment (PRA) approach to model and predict fire safety risk of CNG buses. Generic failure data, engineering judgments, and assumptions are used in this study. This study predicts the mean fire fatality risk for typical CNG buses as approximately 0.23 fatalities per 100-million miles for all people involved, including bus passengers. The study estimates mean values of 0.16 fatalities per 100-million miles for bus passengers only. Based on historical data, diesel school bus mean fire fatality risk is 0.091 and 0.0007 per 100-million miles for all people and bus passengers, respectively. One can therefore conclude that CNG buses are more prone to fire fatality risk by 2.5 times that of diesel buses, with the bus passengers being more at risk by over two orders of magnitude. The study estimates a mean fire risk frequency of 2.2 x 10(-5) fatalities/bus per year. The 5% and 95% uncertainty bounds are 9.1 x 10(-6) and 4.0 x 10(-5), respectively. The risk result was found to be affected most by failure rates of pressure relief valves, CNG cylinders, and fuel piping.

  1. Bus Implementation Using New Low Power PFSCL Tristate Buffers

    OpenAIRE

    Neeta Pandey; Bharat Choudhary; Kirti Gupta; Ankit Mittal

    2016-01-01

    This paper proposes new positive feedback source coupled logic (PFSCL) tristate buffers suited to bus applications. The proposed buffers use switch to attain high impedance state and modify the load or the current source section. An interesting consequence of this is overall reduction in the power consumption. The proposed tristate buffers consume half the power compared to the available switch based counterpart. The issues with available PFSCL tristate buffers based bus implementation are id...

  2. Deciphering the plant splicing code: Experimental and computational approaches for predicting alternative splicing and splicing regulatory elements

    Directory of Open Access Journals (Sweden)

    Anireddy S.N. Reddy

    2012-02-01

    Full Text Available Extensive alternative splicing (AS of precursor mRNAs (pre-mRNAs in multicellular eukaryotes increases the protein-coding capacity of a genome and allows novel ways to regulate gene expression. In fowering plants, up to 48% of intron-containing genes exhibit AS. However, the full extent of AS in plants is not yet known, as only a few high throughput RNA-Seq studies have been performed. As the cost of obtaining RNA-Seq reads continues to fall, it is anticipated that huge amounts of plant sequence data will accumulate and help in obtaining a more complete picture of AS in plants. Although it is not an onerous task to obtain hundreds of millions of reads using high throughput sequencing technologies, computational tools to accurately predict and visualize AS are still being developed and refined. This review will discuss the tools to predict and visualize transcriptome-wide AS in plants using short reads and highlight their limitations. Comparative studies of AS events between plants and animals have revealed that there are major differences in the most prevalent types of AS events, suggesting that plants and animals differ in the way they recognize exons and introns. Extensive studies have been performed in animals to identify cis-elements involved in regulating AS, especially in exon skipping. However, such studies are in their infancy in plants. Here, we review the current state of research on splicing regulatory elements (SREs and briefly discuss emerging experimental and computational tools to identify cis-elements involved in regulation of AS in plants. The availability of curated alternative splice forms in plants makes it possible to use computational tools to predict SREs involved in AS regulation, which can then be verified experimentally. Such studies will permit identification of plant-specific features involved in AS regulation and contribute to deciphering the splicing code in plants.

  3. Modulation transfer function of bar code scanning

    Science.gov (United States)

    Tang, Hong; Milster, Tom D.

    1998-09-01

    Bar code scanners are ubiquitous in supermarkets. As a bar code is passed over a scanner, a laser beam scans across the bar code. The scattered light is modulated by the reflectivity of the bars and spaces of the bar code. The bar code scanning process can be described as a 1D convolution of the scanning laser profile and the bar code reflectivity function. The modulation transfer function (MTF) of bar code scanning is the Fourier transform of the marginal profile of the laser beam. The properties of the MTF of bar code scanning is similar to that of an incoherent imaging system. Measurements of the MTF of bar code scanning at one focus position are presented. The experimental results are then discussed.

  4. Evolution of alternative splicing regulation: changes in predicted exonic splicing regulators are not associated with changes in alternative splicing levels in primates.

    Directory of Open Access Journals (Sweden)

    Manuel Irimia

    Full Text Available Alternative splicing is tightly regulated in a spatio-temporal and quantitative manner. This regulation is achieved by a complex interplay between spliceosomal (trans factors that bind to different sequence (cis elements. cis-elements reside in both introns and exons and may either enhance or silence splicing. Differential combinations of cis-elements allows for a huge diversity of overall splicing signals, together comprising a complex 'splicing code'. Many cis-elements have been identified, and their effects on exon inclusion levels demonstrated in reporter systems. However, the impact of interspecific differences in these elements on the evolution of alternative splicing levels has not yet been investigated at genomic level. Here we study the effect of interspecific differences in predicted exonic splicing regulators (ESRs on exon inclusion levels in human and chimpanzee. For this purpose, we compiled and studied comprehensive datasets of predicted ESRs, identified by several computational and experimental approaches, as well as microarray data for changes in alternative splicing levels between human and chimpanzee. Surprisingly, we found no association between changes in predicted ESRs and changes in alternative splicing levels. This observation holds across different ESR exon positions, exon lengths, and 5' splice site strengths. We suggest that this lack of association is mainly due to the great importance of context for ESR functionality: many ESR-like motifs in primates may have little or no effect on splicing, and thus interspecific changes at short-time scales may primarily occur in these effectively neutral ESRs. These results underscore the difficulties of using current computational ESR prediction algorithms to identify truly functionally important motifs, and provide a cautionary tale for studies of the effect of SNPs on splicing in human disease.

  5. Evolution of alternative splicing regulation: changes in predicted exonic splicing regulators are not associated with changes in alternative splicing levels in primates.

    Science.gov (United States)

    Irimia, Manuel; Rukov, Jakob Lewin; Roy, Scott William

    2009-01-01

    Alternative splicing is tightly regulated in a spatio-temporal and quantitative manner. This regulation is achieved by a complex interplay between spliceosomal (trans) factors that bind to different sequence (cis) elements. cis-elements reside in both introns and exons and may either enhance or silence splicing. Differential combinations of cis-elements allows for a huge diversity of overall splicing signals, together comprising a complex 'splicing code'. Many cis-elements have been identified, and their effects on exon inclusion levels demonstrated in reporter systems. However, the impact of interspecific differences in these elements on the evolution of alternative splicing levels has not yet been investigated at genomic level. Here we study the effect of interspecific differences in predicted exonic splicing regulators (ESRs) on exon inclusion levels in human and chimpanzee. For this purpose, we compiled and studied comprehensive datasets of predicted ESRs, identified by several computational and experimental approaches, as well as microarray data for changes in alternative splicing levels between human and chimpanzee. Surprisingly, we found no association between changes in predicted ESRs and changes in alternative splicing levels. This observation holds across different ESR exon positions, exon lengths, and 5' splice site strengths. We suggest that this lack of association is mainly due to the great importance of context for ESR functionality: many ESR-like motifs in primates may have little or no effect on splicing, and thus interspecific changes at short-time scales may primarily occur in these effectively neutral ESRs. These results underscore the difficulties of using current computational ESR prediction algorithms to identify truly functionally important motifs, and provide a cautionary tale for studies of the effect of SNPs on splicing in human disease. PMID:19495418

  6. Gas flow in barred potentials II. Bar Driven Spiral Arms

    CERN Document Server

    Sormani, Mattia C; Magorrian, John

    2015-01-01

    Spiral arms that emerge from the ends of a galactic bar are important in interpreting observations of our and external galaxies. It is therefore important to understand the physical mechanism that causes them. We find that these spiral arms can be understood as kinematic density waves generated by librations around underlying ballistic closed orbits. This is even true in the case of a strong bar, provided the librations are around the appropriate closed orbits and not around the circular orbits that form the basis of the epicycle approximation. An important consequence is that it is a potential's orbital structure that determines whether a bar should be classified as weak or strong, and not crude estimates of the potential's deviation from axisymmetry.

  7. The influence of Argonaute proteins on alternative RNA splicing.

    Science.gov (United States)

    Batsché, Eric; Ameyar-Zazoua, Maya

    2015-01-01

    Alternative splicing of precursor RNAs is an important process in multicellular species because it impacts several aspects of gene expression: from the increase of protein repertoire to the level of expression. A large body of evidences demonstrates that factors regulating chromatin and transcription impact the outcomes of alternative splicing. Argonaute (AGO) proteins were known to play key roles in the regulation of gene expression at the post-transcriptional level. More recently, their role in the nucleus of human somatic cells has emerged. Here, we will discuss some of the nuclear functions of AGO, with special emphasis on alternative splicing. The AGO-mediated modulation of alternative splicing is based on several properties of these proteins: their binding to transcripts on chromatin and their interactions with many proteins, especially histone tail-modifying enzymes, HP1γ and splicing factors. AGO proteins may favor a decrease in the RNA-polymerase II kinetics at actively transcribed genes leading to the modulation of alternative splicing decisions. They could also influence alternative splicing through their interaction with core components of the splicing machinery and several splicing factors. We will discuss the modes of AGO recruitment on chromatin at active genes. We suggest that long intragenic antisense transcripts (lincRNA) might be an important feature of genes containing splicing events regulated by AGO.

  8. Intronic alternative splicing regulators identified by comparative genomics in nematodes.

    Directory of Open Access Journals (Sweden)

    Jennifer L Kabat

    2006-07-01

    Full Text Available Many alternative splicing events are regulated by pentameric and hexameric intronic sequences that serve as binding sites for splicing regulatory factors. We hypothesized that intronic elements that regulate alternative splicing are under selective pressure for evolutionary conservation. Using a Wobble Aware Bulk Aligner genomic alignment of Caenorhabditis elegans and Caenorhabditis briggsae, we identified 147 alternatively spliced cassette exons that exhibit short regions of high nucleotide conservation in the introns flanking the alternative exon. In vivo experiments on the alternatively spliced let-2 gene confirm that these conserved regions can be important for alternative splicing regulation. Conserved intronic element sequences were collected into a dataset and the occurrence of each pentamer and hexamer motif was counted. We compared the frequency of pentamers and hexamers in the conserved intronic elements to a dataset of all C. elegans intron sequences in order to identify short intronic motifs that are more likely to be associated with alternative splicing. High-scoring motifs were examined for upstream or downstream preferences in introns surrounding alternative exons. Many of the high-scoring nematode pentamer and hexamer motifs correspond to known mammalian splicing regulatory sequences, such as (TGCATG, indicating that the mechanism of alternative splicing regulation is well conserved in metazoans. A comparison of the analysis of the conserved intronic elements, and analysis of the entire introns flanking these same exons, reveals that focusing on intronic conservation can increase the sensitivity of detecting putative splicing regulatory motifs. This approach also identified novel sequences whose role in splicing is under investigation and has allowed us to take a step forward in defining a catalog of splicing regulatory elements for an organism. In vivo experiments confirm that one novel high-scoring sequence from our analysis

  9. DIMETHYL ETHER (DME)-FUELED SHUTTLE BUS DEMONSTRATION PROJECT

    Energy Technology Data Exchange (ETDEWEB)

    Elana M. Chapman; Shirish Bhide; Jennifer Stefanik; Howard Glunt; Andre L. Boehman; Allen Homan; David Klinikowski

    2003-04-01

    The objectives of this research and demonstration program are to convert a campus shuttle bus to operation on dimethyl ether, a potential ultra-clean alternative diesel fuel. To accomplish this objective, this project includes laboratory evaluation of a fuel conversion strategy, as well as, field demonstration of the DME-fueled shuttle bus. Since DME is a fuel with no lubricity (i.e., it does not possess the lubricating quality of diesel fuel), conventional fuel delivery and fuel injection systems are not compatible with dimethyl ether. Therefore, to operate a diesel engine on DME one must develop a fuel-tolerant injection system, or find a way to provide the necessary lubricity to the DME. In this project, they have chosen the latter strategy in order to achieve the objective with minimal need to modify the engine. Their strategy is to blend DME with diesel fuel, to obtain the necessary lubricity to protect the fuel injection system and to achieve low emissions. The bulk of the efforts over the past year were focused on the conversion of the campus shuttle bus. This process, started in August 2001, took until April 2002 to complete. The process culminated in an event to celebrate the launching of the shuttle bus on DME-diesel operation on April 19, 2002. The design of the system on the shuttle bus was patterned after the system developed in the engine laboratory, but also was subjected to a rigorous failure modes effects analysis (FMEA, referred to by Air Products as a ''HAZOP'' analysis) with help from Dr. James Hansel of Air Products. The result of this FMEA was the addition of layers of redundancy and over-pressure protection to the system on the shuttle bus. The system became operational in February 2002. Preliminary emissions tests and basic operation of the shuttle bus took place at the Pennsylvania Transportation Institute's test track facility near the University Park airport. After modification and optimization of the system on

  10. Entropic contributions to the splicing process

    International Nuclear Information System (INIS)

    It has been recently argued that depletion attraction may play an important role in different aspects of cellular organization, ranging from the organization of transcriptional activity in transcription factories to the formation of nuclear bodies. In this paper, we suggest a new application of these ideas in the context of the splicing process, a crucial step of messenger RNA maturation in eukaryotes. We shall show that entropy effects and the resulting depletion attraction may explain the relevance of the aspecific intron length variable in the choice of splice-site recognition modality. On top of that, some qualitative features of the genome architecture of higher eukaryotes can find evolutionary realistic motivation in the light of our model

  11. CROSS-FRONTIER PUBLIC TRANSPORT: Y BUS

    CERN Document Server

    CERN Housing Service

    2002-01-01

    'Y' buses cover the journey between Val Thoiry in France (shopping centre including'Migros' and other stores) and Blandonnet in Switzerland, where they stop outside the 'Jumbo' shop, now renamed 'Carrefour'. In France, the buses connect up Thoiry, Sergy and St. Genis, then cross the border to stop outside CERN, Meyrin, before continuing towards Geneva along the 'Route de Meyrin', stopping outside the 'La Tour' hospital, then at the terminus Blandonnet. The normal fare on French territory with a slight incursion into Switzerland for this purpose as far as CERN, Meyrin, is 1.20 Euros per single journey (ticket valid for one hour). The same amount is charged for any single journey in Switzerland. For example, the cost of a single journey between St. Genis and the 'La Tour' hospital would be 2.40 Euros. The season ticket ('Abonnement de Travail') opens the right to purchase a ticket valid over any period of seven days which entitles the holder to as many journeys as required between the bus stop nearest to the pl...

  12. Splicing therapy for neuromuscular disease ☆

    OpenAIRE

    Andrew G. L. Douglas; Wood, Matthew J. A.

    2013-01-01

    Duchenne muscular dystrophy (DMD) and spinal muscular atrophy (SMA) are two of the most common inherited neuromuscular diseases in humans. Both conditions are fatal and no clinically available treatments are able to significantly alter disease course in either case. However, by manipulation of pre-mRNA splicing using antisense oligonucleotides, defective transcripts from the DMD gene and from the SMN2 gene in SMA can be modified to once again produce protein and restore function. A large numb...

  13. Resolving deconvolution ambiguity in gene alternative splicing

    Directory of Open Access Journals (Sweden)

    Hubbell Earl

    2009-08-01

    Full Text Available Abstract Background For many gene structures it is impossible to resolve intensity data uniquely to establish abundances of splice variants. This was empirically noted by Wang et al. in which it was called a "degeneracy problem". The ambiguity results from an ill-posed problem where additional information is needed in order to obtain an unique answer in splice variant deconvolution. Results In this paper, we analyze the situations under which the problem occurs and perform a rigorous mathematical study which gives necessary and sufficient conditions on how many and what type of constraints are needed to resolve all ambiguity. This analysis is generally applicable to matrix models of splice variants. We explore the proposal that probe sequence information may provide sufficient additional constraints to resolve real-world instances. However, probe behavior cannot be predicted with sufficient accuracy by any existing probe sequence model, and so we present a Bayesian framework for estimating variant abundances by incorporating the prediction uncertainty from the micro-model of probe responsiveness into the macro-model of probe intensities. Conclusion The matrix analysis of constraints provides a tool for detecting real-world instances in which additional constraints may be necessary to resolve splice variants. While purely mathematical constraints can be stated without error, real-world constraints may themselves be poorly resolved. Our Bayesian framework provides a generic solution to the problem of uniquely estimating transcript abundances given additional constraints that themselves may be uncertain, such as regression fit to probe sequence models. We demonstrate the efficacy of it by extensive simulations as well as various biological data.

  14. Splicing variants of porcine synphilin-1

    Directory of Open Access Journals (Sweden)

    Knud Larsen

    2015-09-01

    Full Text Available Parkinson's disease (PD, idiopathic and familial, is characterized by degradation of dopaminergic neurons and the presence of Lewy bodies (LB in the substantia nigra. LBs contain aggregated proteins of which α-synuclein is the major component. The protein synphilin-1 interacts and colocalizes with α-synuclein in LBs. The aim of this study was to isolate and characterize porcine synphilin-1 and isoforms hereof with the future perspective to use the pig as a model for Parkinson's disease. The porcine SNCAIP cDNA was cloned by reverse transcriptase PCR. The spatial expression of SNCAIP mRNA was investigated by RNAseq. The presented work reports the molecular cloning and characterization of the porcine (Sus scrofa synphilin-1 cDNA (SNCAIP and three splice variants hereof. The porcine SNCAIP cDNA codes for a protein (synphilin-1 of 919 amino acids which shows a high similarity to human (90% and to mouse (84% synphilin-1. Three shorter transcript variants of the synphilin-1 gene were identified, all lacking one or more exons. SNCAIP transcripts were detected in most examined organs and tissues and the highest expression was found in brain tissues and lung. Conserved splicing variants and a novel splice form of synhilin-1 were found in this study. All synphilin-1 isoforms encoded by the identified transcript variants lack functional domains important for protein degradation.

  15. The doublesex splicing enhancer components Tra2 and Rbp1 also repress splicing through an intronic silencer.

    Science.gov (United States)

    Qi, Junlin; Su, Shihuang; Mattox, William

    2007-01-01

    The activation of sex-specific alternative splice sites in the Drosophila melanogaster doublesex and fruitless pre-mRNAs has been well studied and depends on the serine-arginine-rich (SR) splicing factors Tra, Tra2, and Rbp1. Little is known, however, about how SR factors negatively regulate splice sites in other RNAs. Here we examine how Tra2 blocks splicing of the M1 intron from its own transcript. We identify an intronic splicing silencer (ISS) adjacent to the M1 branch point that is sufficient to confer Tra2-dependent repression on another RNA. The ISS was found to function independently of its position within the intron, arguing against the idea that bound repressors function by simply interfering with branch point accessibility to general splicing factors. Conserved subelements of the silencer include five short repeated sequences that are required for Tra2 binding but differ from repeated binding sites found in Tra2-dependent splicing enhancers. The ISS also contains a consensus binding site for Rbp1, and this protein was found to facilitate repression of M1 splicing both in vitro and in Drosophila larvae. In contrast to the cooperative binding of SR proteins observed on the doublesex splicing enhancer, we found that Rbp1 and Tra2 bind to the ISS independently through distinct sequences. Our results suggest that functionally synergistic interactions of these SR factors can cause either splicing activation or repression.

  16. A new method for splice site prediction based on the sequence patterns of splicing signals and regulatory elements

    Institute of Scientific and Technical Information of China (English)

    SUN ZongXiao; SANG LingJie; JU LiNing; ZHU HuaiQiu

    2008-01-01

    It is of significance for splice site prediction to develop novel algorithms that combine the sequence patterns of regulatory elements such as enhancers and silencers with the patterns of splicing signals. In this paper, a statistical model of splicing signals was built based on the entropy density profile (EDP) method, weight array method (WAM) and κ test; moreover, the model of splicing regulatory elements was developed by an unsupervised self-learning method to detect motifs associated with regulatory elements. With two models incorporated, a multi-level support vector machine (SVM) system was de-vised to perform ab initio prediction for splice sites originating from DNA sequence in eukaryotic ge-home. Results of large scale tests on human genomic splice sites show that the new method achieves a comparative high performance in splice site prediction. The method is demonstrated to be with at least the same level of performance and usually better performance than the existing SpliceScan method based on modeling regulatory elements, and shown to have higher accuracies than the traditional methods with modeling splicing signals such as the GeneSplicer. In particular, the method has evident advantage over splice site prediction for the genes with lower GC content.

  17. Half pint/Puf68 is required for negative regulation of splicing by the SR splicing factor Transformer2.

    Science.gov (United States)

    Wang, Shanzhi; Wagner, Eric J; Mattox, William

    2013-08-01

    The SR family of proteins plays important regulatory roles in the control of alternative splicing in a wide range of organisms. These factors affect splicing through both positive and negative controls of splice site recognition by pre-spliceosomal factors. Recent studies indicate that the Drosophila SR factor Transformer 2 (Tra2) activates and represses splicing through distinct and separable effector regions of the protein. While the interactions of its Arg-Ser-rich activator region have been well studied, cofactors involved in splicing repression have yet to be found. Here we use a luciferase-based splicing reporter assay to screen for novel proteins necessary for Tra2-dependent repression of splicing. This approach identified Half pint, also known as Puf68, as a co-repressor required for Tra2-mediated autoregulation of the M1 intron. In vivo, Half pint is required for Tra2-dependent repression of M1 splicing but is not necessary for Tra2-dependent activation of doublesex splicing. Further experiments indicate that the effect of Hfp is sequence-specific and that it associates with these target transcripts in cells. Importantly, known M1 splicing regulatory elements are sufficient to sensitize a heterologous intron to Hfp regulation. Two alternative proteins deriving from Hfp transcripts, Hfp68, and Hfp58, were found to be expressed in vivo but differed dramatically in their effect on M1 splicing. Comparison of the cellular localization of these forms in S2 cells revealed that Hfp68 is predominantly localized to the nucleus while Hfp58 is distributed across both the nucleus and cytoplasm. This accords with their observed effects on splicing and suggests that differential compartmentalization may contribute to the specificity of these isoforms. Together, these studies reveal a function for Half pint in splicing repression and demonstrate it to be specifically required for Tra2-dependent intron inclusion.

  18. Measurement of B0bar -> D(*)0 K(*)0bar Branching Fractions

    CERN Document Server

    Aubert, B; Boutigny, D; Couderc, F; Karyotakis, Yu; Lees, J P; Poireau, V; Tisserand, V; Zghiche, A; Graugès-Pous, E; Palano, A; Pappagallo, M; Chen, J C; Qi, N D; Rong, G; Wang, P; Zhu, Y S; Eigen, G; Ofte, I; Stugu, B; Abrams, G S; Battaglia, M; Best, D S; Brown, D N; Button-Shafer, J; Cahn, R N; Charles, E; Day, C T; Gill, M S; Gritsan, A V; Groysman, Y; Jacobsen, R G; Kadyk, J A; Kerth, L T; Kolomensky, Yu G; Kukartsev, G; Lynch, G; Mir, L M; Oddone, P J; Orimoto, T J; Pripstein, M; Roe, N A; Ronan, M T; Wenzel, W A; Barrett, M; Ford, K E; Harrison, T J; Hart, A J; Hawkes, C M; Morgan, S E; Watson, A T; Fritsch, M; Goetzen, K; Held, T; Koch, H; Lewandowski, B; Pelizaeus, M; Peters, K; Schröder, T; Steinke, M; Boyd, J T; Burke, J P; Cottingham, W N; Walker, D; Çuhadar-Dönszelmann, T; Fulsom, B G; Hearty, C; Knecht, N S; Mattison, T S; McKenna, J A; Khan, A; Kyberd, P; Saleem, M; Teodorescu, L; Blinov, V E; Bukin, A D; Buzykaev, A R; Druzhinin, V P; Golubev, V B; Onuchin, A P; Serednyakov, S I; Skovpen, Yu I; Solodov, E P; Todyshev, Yu K; Bondioli, M; Bruinsma, M; Chao, M; Curry, S; Eschrich, I; Kirkby, D; Lankford, A J; Lund, P; Mandelkern, M A; Mommsen, R K; Röthel, W; Stoker, D P; Abachi, S; Buchanan, C; Foulkes, S D; Gary, J W; Long, O; Shen, B C; Wang, K; Zhang, L; Del Re, D; Hadavand, H K; Hill, E J; Paar, H P; Rahatlou, S; Sharma, V; Berryhill, J W; Campagnari, C; Cunha, A; Dahmes, B; Hong, T M; Richman, J D; Beck, T W; Eisner, A M; Flacco, C J; Heusch, C A; Kroseberg, J; Lockman, W S; Nesom, G; Schalk, T; Schumm, B A; Seiden, A; Spradlin, P; Williams, D C; Wilson, M G; Albert, J; Chen, E; Dubois-Felsmann, G P; Dvoretskii, A; Hitlin, D G; Narsky, I; Piatenko, T; Porter, F C; Ryd, A; Samuel, A; Andreassen, R; Mancinelli, G; Meadows, B T; Sokoloff, M D; Blanc, F; Bloom, P C; Chen, S; Ford, W T; Hirschauer, J F; Kreisel, A; Nauenberg, U; Olivas, A; Ruddick, W O; Smith, J G; Ulmer, K A; Wagner, S R; Zhang, J; Chen, A; Eckhart, E A; Soffer, A; Toki, W H; Wilson, R J; Winklmeier, F; Zeng, Q; Altenburg, D D; Feltresi, E; Hauke, A; Jasper, H; Spaan, B; Brandt, T; Klose, V; Lacker, H M; Nogowski, R; Petzold, A; Schubert, J; Schubert, K R; Schwierz, R; Sundermann, J E; Volk, A; Bernard, D; Bonneaud, G R; Grenier, P; Latour, E; Thiebaux, C; Verderi, M; Bard, D J; Clark, P J; Gradl, W; Muheim, F; Playfer, S; Xie, Y; Andreotti, M; Bettoni, D; Bozzi, C; Calabrese, R; Cibinetto, G; Luppi, E; Negrini, M; Piemontese, L; Anulli, F; Baldini-Ferroli, R; Calcaterra, A; De Sangro, R; Finocchiaro, G; Pacetti, S; Patteri, P; Peruzzi, I M; Piccolo, M; Rama, M; Zallo, A; Buzzo, A; Capra, R; Contri, R; Lo Vetere, M; Macri, M M; Monge, M R; Passaggio, S; Patrignani, C; Robutti, E; Santroni, A; Tosi, S; Brandenburg, G; Chaisanguanthum, K S; Morii, M; Wu, J; Dubitzky, R S; Marks, J; Schenk, S; Uwer, U; Bhimji, W; Bowerman, D A; Dauncey, P D; Egede, U; Flack, R L; Gaillard, J R; Nash, J A; Nikolich, M B; Panduro-Vazquez, W; Chai, X; Charles, M J; Mader, W F; Mallik, U; Ziegler, V; Cochran, J; Crawley, H B; Dong, L; Eyges, V; Meyer, W T; Prell, S; Rosenberg, E I; Rubin, A E; Schott, G; Arnaud, N; Davier, M; Grosdidier, G; Höcker, A; Le Diberder, F R; Lepeltier, V; Lutz, A M; Oyanguren, A; Petersen, T C; Pruvot, S; Rodier, S; Roudeau, P; Schune, M H; Stocchi, A; Wang, W F; Wormser, G; Cheng, C H; Lange, D J; Wright, D M; Chavez, C A; Forster, I J; Fry, J R; Gabathuler, E; Gamet, R; George, K A; Hutchcroft, D E; Payne, D J; Schofield, K C; Touramanis, C; Bevan, A J; Di Lodovico, F; Menges, W; Sacco, R; Brown, C L; Cowan, G; Flächer, H U; Hopkins, D A; Jackson, P S; McMahon, T R; Ricciardi, S; Salvatore, F; Davis, C L; Allison, J; Barlow, N R; Barlow, R J; Chia, Y M; Edgar, C L; Kelly, M P; Lafferty, G D; Naisbit, M T; Williams, J C; Yi, J I; Chen, C; Hulsbergen, W D; Jawahery, A; Kovalskyi, D; Lae, C K; Roberts, D A; Simi, G; Blaylock, G; Dallapiccola, C; Hertzbach, S S; Li, X; Moore, T B; Saremi, S; Stängle, H; Willocq, S Y; Cowan, R; Koeneke, K; Sciolla, G; Sekula, S J; Spitznagel, M; Taylor, F; Yamamoto, R K; Kim, H; Patel, P M; Potter, C T; Robertson, S H; Lazzaro, A; Lombardo, V; Palombo, F; Bauer, J M; Cremaldi, L; Eschenburg, V; Godang, R; Kroeger, R; Reidy, J; Sanders, D A; Summers, D J; Zhao, H W; Brunet, S; Côté, D; Simard, M; Taras, P; Viaud, F B; Nicholson, H; Cavallo, N; De Nardo, Gallieno; Fabozzi, F; Gatto, C; Lista, L; Monorchio, D; Paolucci, P; Piccolo, D; Sciacca, C; Baak, M; Bulten, H; Raven, G; Snoek, H L; Jessop, C P; LoSecco, J M; Allmendinger, T; Benelli, G; Gan, K K; Honscheid, K; Hufnagel, D; Jackson, P D; Kagan, H; Kass, R; Pulliam, T; Rahimi, A M; Ter-Antonian, R; Wong, Q K; Blount, N L; Brau, J E; Frey, R; Igonkina, O; Lu, M; Rahmat, R; Sinev, N B; Strom, D; Strube, J; Torrence, E; Galeazzi, F; Gaz, A; Margoni, M; Morandin, M; Pompili, A; Posocco, M; Rotondo, M; Simonetto, F; Stroili, R; Voci, C; Benayoun, M; Chauveau, J; David, P; Del Buono, L; La Vaissière, C de; Hamon, O; Hartfiel, B L; John, M J J; Leruste, P; Malcles, J; Ocariz, J; Roos, L; Therin, G; Behera, P K; Gladney, L; Panetta, J; Biasini, M; Covarelli, R; Pioppi, M; Angelini, C; Batignani, G; Bettarini, S; Bucci, F; Calderini, G; Carpinelli, M; Cenci, R; Forti, F; Giorgi, M A; Lusiani, A; Marchiori, G; Mazur, M A; Morganti, M; Neri, N; Paoloni, E; Rizzo, G; Walsh, J; Haire, M; Judd, D; Wagoner, D E; Biesiada, J; Danielson, N; Elmer, P; Lau, Y P; Lü, C; Olsen, J; Smith, A J S; Telnov, A V; Bellini, F; Cavoto, G; D'Orazio, A; Di, E; Marco; Faccini, R; Ferrarotto, F; Ferroni, F; Gaspero, M; Li Gioi, L; Mazzoni, M A; Morganti, S; Piredda, G; Polci, F; Safai-Tehrani, F; Voena, C; Schröder, H; Waldi, R; Adye, T; De Groot, N; Franek, B; Olaiya, E O; Wilson, F F; Emery, S; Gaidot, A; Ganzhur, S F; Hamel de Monchenault, G; Kozanecki, Witold; Legendre, M; Mayer, B; Vasseur, G; Yéche, C; Zito, M; Park, W; Purohit, M V; Weidemann, A W; Wilson, J R; Allen, M T; Aston, D; Bartoldus, R; Bechtle, P; Berger, N; Boyarski, A M; Claus, R; Coleman, J P; Convery, M R; Cristinziani, M; Dingfelder, J C; Dong, D; Dorfan, J; Dujmic, D; Dunwoodie, W M; Field, R C; Glanzman, T; Gowdy, S J; Halyo, V; Hast, C; Hrynóva, T; Innes, W R; Kelsey, M H; Kim, P; Kocian, M L; Leith, D W G S; Libby, J; Luitz, S; Lüth, V; Lynch, H L; MacFarlane, D B; Marsiske, H; Messner, R; Müller, D R; O'Grady, C P; Ozcan, V E; Perazzo, A; Perl, M; Ratcliff, B N; Roodman, A; Salnikov, A A; Schindler, R H; Schwiening, J; Snyder, A; Stelzer, J; Su, D; Sullivan, M K; Suzuki, K; Swain, S K; Thompson, J M; Vavra, J; Van Bakel, N; Weaver, M; Weinstein, A J R; Wisniewski, W J; Wittgen, M; Wright, D H; Yarritu, A K; Yi, K; Young, C C; Burchat, P R; Edwards, A J; Majewski, S A; Petersen, B A; Roat, C; Wilden, L; Ahmed, S; Alam, M S; Bula, R; Ernst, J A; Jain, V; Pan, B; Saeed, M A; Wappler, F R; Zain, S B; Bugg, W; Krishnamurthy, M; Spanier, S M; Eckmann, R; Ritchie, J L; Satpathy, A; Schwitters, R F; Izen, J M; Kitayama, I; Lou, X C; Ye, S; Bianchi, F; Bóna, M; Gallo, F; Gamba, D; Bomben, M; Bosisio, L; Cartaro, C; Cossutti, F; Della Ricca, G; Dittongo, S; Grancagnolo, S; Lanceri, L; Vitale, L; Azzolini, V; Martínez-Vidal, F; Panvini, R S; Banerjee, Sw; Bhuyan, B; Brown, C M; Fortin, D; Hamano, K; Kowalewski, R V; Nugent, I M; Roney, J M; Sobie, R J; Back, J J; Harrison, P F; Latham, T E; Mohanty, G B; Band, H R; Chen, X; Cheng, B; Dasu, S; Datta, M; Eichenbaum, A M; Flood, K T; Graham, M T; Hollar, J J; Johnson, J R; Kutter, P E; Li, H; Liu, R; Mellado, B; Mihályi, A; Mohapatra, A K; Pan, Y; Pierini, M; Prepost, R; Tan, P; Wu, S L; Yu, Z; Neal, H

    2006-01-01

    We present a study of the decays B0bar --> D(*)0 K(*)0bar using a sample of 226 million Y(4S) --> B Bbar decays collected with the BaBar detector at the PEP-II asymmetric-energy e+e-collider at SLAC. We report evidence for the decay of B0 and B0bar mesons to the D*0 K0s final state with an average branching fraction BF(B0-tilde --> D*0 K0bar) := [ BF(B0bar --> D*0 K0bar) + BF(B0 --> D*0 K0) ]/2 = (3.6 +- 1.2 +- 0.3) x 10^-5. Similarly, we measure BF(B0-tilde --> D0 K0bar) := [ BF(B0bar --> D0 K0bar) + BF(B0 --> D0 K0) ]/2 = (5.3 +- 0.7 +- 0.3) x 10^-5 forthe D0 K0s final state. We measure BF(B0bar --> D0 K*0bar) =^(4.0 +- 0.7 +- 0.3) x 10^-5 and set a 90% confidence level upper limit BF(B0bar --> D0bar K*0bar) D0bar K*0bar)/A(B0bar --> D0 K*0bar)| to be less than 0.4 at the 90% confidence level.

  19. The implications of alternative splicing in the ENCODE protein complement

    DEFF Research Database (Denmark)

    Tress, Michael L.; Martelli, Pier Luigi; Frankish, Adam;

    2007-01-01

    Alternative premessenger RNA splicing enables genes to generate more than one gene product. Splicing events that occur within protein coding regions have the potential to alter the biological function of the expressed protein and even to create new protein functions. Alternative splicing has been...... suggested as one explanation for the discrepancy between the number of human genes and functional complexity. Here, we carry out a detailed study of the alternatively spliced gene products annotated in the ENCODE pilot project. We find that alternative splicing in human genes is more frequent than has...... commonly been suggested, and we demonstrate that many of the potential alternative gene products will have markedly different structure and function from their constitutively spliced counterparts. For the vast majority of these alternative isoforms, little evidence exists to suggest they have a role...

  20. Accumulation of GC donor splice signals in mammals

    Directory of Open Access Journals (Sweden)

    Koonin Eugene V

    2008-07-01

    Full Text Available Abstract The GT dinucleotide in the first two intron positions is the most conserved element of the U2 donor splice signals. However, in a small fraction of donor sites, GT is replaced by GC. A substantial enrichment of GC in donor sites of alternatively spliced genes has been observed previously in human, nematode and Arabidopsis, suggesting that GC signals are important for regulation of alternative splicing. We used parsimony analysis to reconstruct evolution of donor splice sites and inferred 298 GT > GC conversion events compared to 40 GC > GT conversion events in primate and rodent genomes. Thus, there was substantive accumulation of GC donor splice sites during the evolution of mammals. Accumulation of GC sites might have been driven by selection for alternative splicing. Reviewers This article was reviewed by Jerzy Jurka and Anton Nekrutenko. For the full reviews, please go to the Reviewers' Reports section.

  1. Splicing modulation therapy in the treatment of genetic diseases

    Directory of Open Access Journals (Sweden)

    Arechavala-Gomeza V

    2014-12-01

    Full Text Available Virginia Arechavala-Gomeza,1 Bernard Khoo,2 Annemieke Aartsma-Rus3 1Neuromuscular Disorders Group, BioCruces Health Research Institute, Barakaldo, Bizkaia, Spain; 2Endocrinology, Division of Medicine, University College London, London, UK; 3Department of Human Genetics, Leiden University Medical Center, Leiden, the Netherlands All authors contributed equally to this manuscript Abstract: Antisense-mediated splicing modulation is a tool that can be exploited in several ways to provide a potential therapy for rare genetic diseases. This approach is currently being tested in clinical trials for Duchenne muscular dystrophy and spinal muscular atrophy. The present review outlines the versatility of the approach to correct cryptic splicing, modulate alternative splicing, restore the open reading frame, and induce protein knockdown, providing examples of each. Finally, we outline a possible path forward toward the clinical application of this approach for a wide variety of inherited rare diseases. Keywords: splicing, therapy, antisense oligonucleotides, cryptic splicing, alternative splicing

  2. Dynamically possible pattern speeds of double bars

    CERN Document Server

    Maciejewski, Witold

    2009-01-01

    The method to study oscillating potentials of double bars, based on invariant loops, is introduced here in a new way, intended to be more intelligible. Using this method, I show how the orbital structure of a double-barred galaxy (nested bars) changes with the variation of nuclear bar's pattern speed. Not all pattern speeds are allowed when the inner bar rotates in the same direction as the outer bar. Below certain minimum pattern speed orbital support for the inner bar abruptly disappears, while high values of this speed lead to loops that are increasingly round. For values between these two extremes, loops supporting the inner bar extend further out as its pattern speed decreases, and they become more eccentric and pulsate more. These findings do not apply to counter-rotating inner bars.

  3. Discovery and analysis of evolutionarily conserved intronic splicing regulatory elements.

    Directory of Open Access Journals (Sweden)

    Gene W Yeo

    2007-05-01

    Full Text Available Knowledge of the functional cis-regulatory elements that regulate constitutive and alternative pre-mRNA splicing is fundamental for biology and medicine. Here we undertook a genome-wide comparative genomics approach using available mammalian genomes to identify conserved intronic splicing regulatory elements (ISREs. Our approach yielded 314 ISREs, and insertions of ~70 ISREs between competing splice sites demonstrated that 84% of ISREs altered 5' and 94% altered 3' splice site choice in human cells. Consistent with our experiments, comparisons of ISREs to known splicing regulatory elements revealed that 40%-45% of ISREs might have dual roles as exonic splicing silencers. Supporting a role for ISREs in alternative splicing, we found that 30%-50% of ISREs were enriched near alternatively spliced (AS exons, and included almost all known binding sites of tissue-specific alternative splicing factors. Further, we observed that genes harboring ISRE-proximal exons have biases for tissue expression and molecular functions that are ISRE-specific. Finally, we discovered that for Nova1, neuronal PTB, hnRNP C, and FOX1, the most frequently occurring ISRE proximal to an alternative conserved exon in the splicing factor strongly resembled its own known RNA binding site, suggesting a novel application of ISRE density and the propensity for splicing factors to auto-regulate to associate RNA binding sites to splicing factors. Our results demonstrate that ISREs are crucial building blocks in understanding general and tissue-specific AS regulation and the biological pathways and functions regulated by these AS events.

  4. Embracing the complexity of pre-mRNA splicing

    Institute of Scientific and Technical Information of China (English)

    Peter J Shepard; Klemens J Hertel

    2010-01-01

    @@ Pre-mRNA splicing is a fundamental process required for the expression of most metazoan genes. It is carried out by the spliceosome, which catalyzes the removal of non-coding intronic sequences to assemble exons into mature mRNAs prior to export and translation.Defects in splicing lead to many human genetic diseases [1], and splicing mutations in a number of genes involved in growth control have been implicated in multiple types of cancer.

  5. Tissue-specific splicing factor gene expression signatures

    OpenAIRE

    Grosso, A. R.; Gomes, Anita; Barbosa-Morais, Nuno; Caldeira, Sandra; Thorne, Natalie; Grech, Godfrey; Lindern, Marieke; Carmo-Fonseca, Maria

    2008-01-01

    textabstractThe alternative splicing code that controls and coordinates the transcriptome in complex multicellular organisms remains poorly understood. It has long been argued that regulation of alternative splicing relies on combinatorial interactions between multiple proteins, and that tissue-specific splicing decisions most likely result from differences in the concentration and/or activity of these proteins. However, large-scale data to systematically address this issue have just recently...

  6. Alternative Splicing and Its Impact as a Cancer Diagnostic Marker

    OpenAIRE

    Kim, Yun-Ji; Kim, Heui-Soo

    2012-01-01

    Most genes are processed by alternative splicing for gene expression, resulting in the complexity of the transcriptome in eukaryotes. It allows a limited number of genes to encode various proteins with intricate functions. Alternative splicing is regulated by genetic mutations in cis-regulatory factors and epigenetic events. Furthermore, splicing events occur differently according to cell type, developmental stage, and various diseases, including cancer. Genome instability and flexible proteo...

  7. Pre-mRNA splicing in disease and therapeutics

    OpenAIRE

    Singh, Ravi K.; Cooper, Thomas A.

    2012-01-01

    In metazoans, alternative splicing of genes is essential for regulating gene expression and contributing to functional complexity. Computational predictions, comparative genomics, and transcriptome profiling of normal and diseased tissues indicate an unexpectedly high fraction of diseases are caused by mutations that alter splicing. Mutations in cis elements cause mis-splicing of genes that alter gene function and contribute to disease pathology. Mutations of core spliceosomal factors are ass...

  8. Phosphorylation-Mediated Regulation of Alternative Splicing in Cancer

    OpenAIRE

    Chiara Naro; Claudio Sette

    2013-01-01

    Alternative splicing (AS) is one of the key processes involved in the regulation of gene expression in eukaryotic cells. AS catalyzes the removal of intronic sequences and the joining of selected exons, thus ensuring the correct processing of the primary transcript into the mature mRNA. The combinatorial nature of AS allows a great expansion of the genome coding potential, as multiple splice-variants encoding for different proteins may arise from a single gene. Splicing is mediated by a large...

  9. Application of CAN Bus Technology on Zhongtong Bus%CAN总线技术在中通客车上的应用

    Institute of Scientific and Technical Information of China (English)

    赵佳

    2012-01-01

    The application status of CAN bus technology on Zhongtong bus is introduced, the methods of bus data collection and analysis on Zhongtong traditional and new energy bus are discussed and the development direction of CAN bus technology is prospected.%介绍CAN总线技术在中通客车上的应用状况,探讨中通传统客车及新能源客车的总线数据采集和分析方法。

  10. DNA splice site sequences clustering method for conservativeness analysis

    Institute of Scientific and Technical Information of China (English)

    Quanwei Zhang; Qinke Peng; Tao Xu

    2009-01-01

    DNA sequences that are near to splice sites have remarkable conservativeness,and many researchers have contributed to the prediction of splice site.In order to mine the underlying biological knowledge,we analyze the conservativeness of DNA splice site adjacent sequences by clustering.Firstly,we propose a kind of DNA splice site sequences clustering method which is based on DBSCAN,and use four kinds of dissimilarity calculating methods.Then,we analyze the conservative feature of the clustering results and the experimental data set.

  11. Viral interactions with components of the splicing machinery.

    Science.gov (United States)

    Meyer, F

    2016-01-01

    Eukaryotic genes are often interrupted by stretches of sequence with no protein coding potential or obvious function. After transcription, these interrupting sequences must be removed to give rise to the mature messenger RNA. This fundamental process is called RNA splicing and is achieved by complicated machinery made of protein and RNA that assembles around the RNA to be edited. Viruses also use RNA splicing to maximize their coding potential and economize on genetic space, and use clever strategies to manipulate the splicing machinery to their advantage. This article gives an overview of the splicing process and provides examples of viral strategies that make use of various components of the splicing system to promote their replicative cycle. Representative virus families have been selected to illustrate the interaction with various regulatory proteins and ribonucleoproteins. The unifying theme is fine regulation through protein-protein and protein-RNA interactions with the spliceosome components and associated factors to promote or prevent spliceosome assembly on given splice sites, in addition to a strong influence from cis-regulatory sequences on viral transcripts. Because there is an intimate coupling of splicing with the processes that direct mRNA biogenesis, a description of how these viruses couple the regulation of splicing with the retention or stability of mRNAs is also included. It seems that a unique balance of suppression and activation of splicing and nuclear export works optimally for each family of viruses.

  12. RNA Splicing: Regulation and Dysregulation in the Heart.

    Science.gov (United States)

    van den Hoogenhof, Maarten M G; Pinto, Yigal M; Creemers, Esther E

    2016-02-01

    RNA splicing represents a post-transcriptional mechanism to generate multiple functional RNAs or proteins from a single transcript. The evolution of RNA splicing is a prime example of the Darwinian function follows form concept. A mutation that leads to a new mRNA (form) that encodes for a new functional protein (function) is likely to be retained, and this way, the genome has gradually evolved to encode for genes with multiple isoforms, thereby creating an enormously diverse transcriptome. Advances in technologies to characterize RNA populations have led to a better understanding of RNA processing in health and disease. In the heart, alternative splicing is increasingly being recognized as an important layer of post-transcriptional gene regulation. Moreover, the recent identification of several cardiac splice factors, such as RNA-binding motif protein 20 and SF3B1, not only provided important insight into the mechanisms underlying alternative splicing but also revealed how these splicing factors impact functional properties of the heart. Here, we review our current knowledge of alternative splicing in the heart, with a particular focus on the major and minor spliceosome, the factors controlling RNA splicing, and the role of alternative splicing in cardiac development and disease.

  13. Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii

    Directory of Open Access Journals (Sweden)

    Thomas Julie

    2010-02-01

    Full Text Available Abstract Background Genome-wide computational analysis of alternative splicing (AS in several flowering plants has revealed that pre-mRNAs from about 30% of genes undergo AS. Chlamydomonas, a simple unicellular green alga, is part of the lineage that includes land plants. However, it diverged from land plants about one billion years ago. Hence, it serves as a good model system to study alternative splicing in early photosynthetic eukaryotes, to obtain insights into the evolution of this process in plants, and to compare splicing in simple unicellular photosynthetic and non-photosynthetic eukaryotes. We performed a global analysis of alternative splicing in Chlamydomonas reinhardtii using its recently completed genome sequence and all available ESTs and cDNAs. Results Our analysis of AS using BLAT and a modified version of the Sircah tool revealed AS of 498 transcriptional units with 611 events, representing about 3% of the total number of genes. As in land plants, intron retention is the most prevalent form of AS. Retained introns and skipped exons tend to be shorter than their counterparts in constitutively spliced genes. The splice site signals in all types of AS events are weaker than those in constitutively spliced genes. Furthermore, in alternatively spliced genes, the prevalent splice form has a stronger splice site signal than the non-prevalent form. Analysis of constitutively spliced introns revealed an over-abundance of motifs with simple repetitive elements in comparison to introns involved in intron retention. In almost all cases, AS results in a truncated ORF, leading to a coding sequence that is around 50% shorter than the prevalent splice form. Using RT-PCR we verified AS of two genes and show that they produce more isoforms than indicated by EST data. All cDNA/EST alignments and splice graphs are provided in a website at http://combi.cs.colostate.edu/as/chlamy. Conclusions The extent of AS in Chlamydomonas that we observed is much

  14. Adenosine to Inosine editing frequency controlled by splicing efficiency.

    Science.gov (United States)

    Licht, Konstantin; Kapoor, Utkarsh; Mayrhofer, Elisa; Jantsch, Michael F

    2016-07-27

    Alternative splicing and adenosine to inosine (A to I) RNA-editing are major factors leading to co- and post-transcriptional modification of genetic information. Both, A to I editing and splicing occur in the nucleus. As editing sites are frequently defined by exon-intron basepairing, mRNA splicing efficiency should affect editing levels. Moreover, splicing rates affect nuclear retention and will therefore also influence the exposure of pre-mRNAs to the editing-competent nuclear environment. Here, we systematically test the influence of splice rates on RNA-editing using reporter genes but also endogenous substrates. We demonstrate for the first time that the extent of editing is controlled by splicing kinetics when editing is guided by intronic elements. In contrast, editing sites that are exclusively defined by exonic structures are almost unaffected by the splicing efficiency of nearby introns. In addition, we show that editing levels in pre- and mature mRNAs do not match. This phenomenon can in part be explained by the editing state of an RNA influencing its splicing rate but also by the binding of the editing enzyme ADAR that interferes with splicing. PMID:27112566

  15. Study of fast transients generated in a GIS bus duct in compressed $SF_6-N_2$ gas mixtures containing lower percentages of $SF_6$

    OpenAIRE

    Singha, S.; Joy, Thomas M; Naidu, MS

    2000-01-01

    This paper deals with the study of Very Fast Transient Overvoltages (VFTO) with $SF_6-N_2$ gas mixture as the insulating medium, but with lower percentages of $SF_6$ in the mixture. The investigations are performed using a laboratory model bus duct. A capacitive voltage sensor was used to measure the peak VFTO and temporal characteristics. Measurements were carried out in $SF_6-N_2$ gas mixtures wherein the concentration of $SF_6$ was varied from 0 to 20% over a pressure range of 1 to 5 bars....

  16. Bars in the Barkor Street

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    In daytime,the Barkor Street is bustling with tourists,pious pilgrims and merchants crowded together.Only when darkness falls does the street become tranquil.Nevertheless,the area surrounding the Barkor Street(from Tibetan Hospital compound extending to east Beijing Road)is then revived by various kinds of bars.

  17. Bars in Beijing Old Town

    Institute of Scientific and Technical Information of China (English)

    GUANYUNZHANG

    2003-01-01

    It's seven pm on a summer's evening by Shichahao Lake,central Beijing.A welcome breeze whispers across the lake,and the ruddy vestiges of sunset linger on roofs and treetops.A low hum emanates from bars on the lakeshore packed with young people chatting,drinking and generally

  18. Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay

    OpenAIRE

    Ni, Julie Z.; Grate, Leslie; Donohue, John Paul; Preston, Christine; Nobida, Naomi; O’Brien, Georgeann; Shiue, Lily; Clark, Tyson A.; Blume, John E; Ares, Manuel

    2007-01-01

    Many alternative splicing events create RNAs with premature stop codons, suggesting that alternative splicing coupled with nonsense-mediated decay (AS-NMD) may regulate gene expression post-transcriptionally. We tested this idea in mice by blocking NMD and measuring changes in isoform representation using splicing-sensitive microarrays. We found a striking class of highly conserved stop codon-containing exons whose inclusion renders the transcript sensitive to NMD. A genomic search for additi...

  19. Car Delay Model near Bus Stops with Mixed Traffic Flow

    Directory of Open Access Journals (Sweden)

    Yang Xiaobao

    2013-01-01

    Full Text Available This paper proposes a model for estimating car delays at bus stops under mixed traffic using probability theory and queuing theory. The roadway is divided to serve motorized and nonmotorized traffic streams. Bus stops are located on the nonmotorized lanes. When buses dwell at the stop, they block the bicycles. Thus, two conflict points between car stream and other traffic stream are identified. The first conflict point occurs as bicycles merge to the motorized lane to avoid waiting behind the stopping buses. The second occurs as buses merge back to the motorized lane. The average car delay is estimated as the sum of the average delay at these two conflict points and the delay resulting from following the slower bicycles that merged into the motorized lane. Data are collected to calibrate and validate the developed model from one site in Beijing. The sensitivity of car delay to various operation conditions is examined. The results show that both bus stream and bicycle stream have significant effects on car delay. At bus volumes above 200 vehicles per hour, the curbside stop design is not appropriate because of the long car delays. It can be replaced by the bus bay design.

  20. Capacity Region of a New Bus Communication Model

    Directory of Open Access Journals (Sweden)

    Zhuojun Zhuang

    2013-02-01

    Full Text Available In this paper, we study a new bus communication model, where two transmitters wish to send their corresponding private messages and a common message to a destination, while they also wish to send the common message to another receiver connected to the same wire. From an information-theoretical point of view, we first study a general case of this new model (with discrete memoryless channels. The capacity region composed of all achievable (R0,R1,R2 triples is determined for this general model, where R1 and R2 are the transmission rates of the private messages and R0 is the transmission rate of the common message. Then, the result is further explained via the Gaussian example. Finally, we give the capacity region for the new bus communication model with additive Gaussian noises and attenuation factors. This new bus communication model captures various communication scenarios, such as the bus systems in vehicles, and the bus type of communication channel in power line communication (PLC networks.

  1. Galaxy Zoo: Observing Secular Evolution Through Bars

    CERN Document Server

    Cheung, Edmond; Masters, Karen L; Nichol, Robert C; Bosma, A; Bell, Eric F; Faber, S M; Koo, David C; Lintott, Chris; Melvin, Thomas; Schawinski, Kevin; Skibba, Ramin A; Willett, Kyle W

    2013-01-01

    Observations have shown that there is a connection between the presence of a bar and the properties of a galaxy. In a parallel effort, simulations have shown that this connection is consistent with the theory of bar-driven secular evolution. But observational evidence of bar-driven secular evolution has been sparse. In this paper, we use the Galaxy Zoo 2 dataset to look for evidence of this secular evolution. Our sample consists of 13,295 disk galaxies, with an overall bar fraction of 23.6 +/- 0.4%, of which 1,154 barred galaxies also have bar length measurements. These samples are the largest ever used to study the role of bars in disk galaxy evolution. We characterize bars by the bar likelihood, the likelihood a bar is present in a given galaxy, and the bar length. These two bar properties show interesting correlations with the specific star formation rate and the inner central structure of galaxies. Comparing these observations to state-of-the-art simulations of bar evolution, which include live halos and ...

  2. Pre-mRNA Splicing in Plants: In Vivo Functions of RNA-Binding Proteins Implicated in the Splicing Process

    Directory of Open Access Journals (Sweden)

    Katja Meyer

    2015-07-01

    Full Text Available Alternative pre-messenger RNA splicing in higher plants emerges as an important layer of regulation upon exposure to exogenous and endogenous cues. Accordingly, mutants defective in RNA-binding proteins predicted to function in the splicing process show severe phenotypic alterations. Among those are developmental defects, impaired responses to pathogen threat or abiotic stress factors, and misregulation of the circadian timing system. A suite of splicing factors has been identified in the model plant Arabidopsis thaliana. Here we summarize recent insights on how defects in these splicing factors impair plant performance.

  3. Genetic Variation of Pre-mRNA Alternative Splicing in Human Populations

    OpenAIRE

    Lu, Zhi-xiang; Jiang, Peng; Xing, Yi

    2011-01-01

    The precise splicing outcome of a transcribed gene is controlled by complex interactions between cis regulatory splicing signals and trans-acting regulators. In higher eukaryotes, alternative splicing is a prevalent mechanism for generating transcriptome and proteome diversity. Alternative splicing can modulate gene function, affect organismal phenotype and cause disease. Common genetic variation that affects splicing regulation can lead to differences in alternative splicing between human in...

  4. The Caenorhabditis elegans Gene mfap-1 Encodes a Nuclear Protein That Affects Alternative Splicing

    OpenAIRE

    Long Ma; Xiaoyang Gao; Jintao Luo; Liange Huang; Yanling Teng; H Robert Horvitz

    2012-01-01

    RNA splicing is a major regulatory mechanism for controlling eukaryotic gene expression. By generating various splice isoforms from a single pre-mRNA, alternative splicing plays a key role in promoting the evolving complexity of metazoans. Numerous splicing factors have been identified. However, the in vivo functions of many splicing factors remain to be understood. In vivo studies are essential for understanding the molecular mechanisms of RNA splicing and the biology of numerous RNA splicin...

  5. Texas Hydrogen Highway Fuel Cell Hybrid Bus and Fueling Infrastructure Technology Showcase - Final Scientific/Technical Report

    Energy Technology Data Exchange (ETDEWEB)

    Hitchcock, David

    2012-06-29

    , and regenerative braking for battery charging. It uses a 19.3 kW Ballard PEM fuel cell, will store 12.6 kg of hydrogen at 350 Bar, and includes a 60 kWh battery storage system. The objectives of the project included the following: (a) To advance commercialization of hydrogen-powered transit buses and supporting infrastructure; (b) To provide public outreach and education by showcasing the operation of a 22-foot fuel cell hybrid shuttle bus and Texas first hydrogen fueling infrastructure; and (c) To showcase operation of zero-emissions vehicle for potential transit applications. As mentioned above, the project successfully demonstrated an early vehicle technology, the Ebus plug-in hybrid fuel cell bus, and that success has led to the acquisition of a more advanced vehicle that can take advantage of the same fueling infrastructure. Needed hydrogen station improvements have been identified that will enhance the capabilities of the fueling infrastructure to serve the new bus and to meet the transit agency needs. Over the course of this project, public officials, local government staff, and transit operators were engaged in outreach and education activities that acquainted them with the real world operation of a fuel cell bus and fueling infrastructure. Transit staff members in the Dallas/Ft. Worth region were invited to a workshop in Arlington, Texas at the North Central Texas Council of Governments to participate in a workshop on hydrogen and fuel cells, and to see the fuel cell bus in operation. The bus was trucked to the meeting for this purpose so that participants could see and ride the bus. Austin area transit staff members visited the fueling site in Austin to be briefed on the bus and to participate in a fueling demonstration. This led to further meetings to determine how a fuel cell bus and fueling station could be deployed at Capital Metro Transit. Target urban regions that expressed additional interest during the project in response to the outreach meetings and

  6. The conserved splicing factor SUA controls alternative splicing of the developmental regulator ABI3 in Arabidopsis.

    NARCIS (Netherlands)

    Sugliani, M.; Brambilla, V.; Clerkx, E.J.M.; Koornneef, M.; Soppe, W.J.J.

    2010-01-01

    ABSCISIC ACID INSENSITIVE3 (ABI3) is a major regulator of seed maturation in Arabidopsis thaliana. We detected two ABI3 transcripts, ABI3- and ABI3-ß, which encode full-length and truncated proteins, respectively. Alternative splicing of ABI3 is developmentally regulated, and the ABI3-ß transcript a

  7. Going Smokefree Matters - Bars and Restaurants Infographic

    Data.gov (United States)

    U.S. Department of Health & Human Services — Explore the Going Smokefree Matters – Bars and Restaurants Infographic which outlines key facts related to the effects of secondhand smoke exposure in bars and...

  8. Bar, Orliac-de-Bar, Beaumont, Saint–Augustin, Ussel

    OpenAIRE

    Simonnot, Bernard

    2013-01-01

    Identifiant de l'opération archéologique : 2735 Date de l'opération : 2007 (PR) Inventeur(s) : Simonnot Bernard (BEN) La prospection sur les communes de Bar, Orliac-de-Bar, Beaumont et Saint-Augustin n’ayant pas donné pour le moment de nouveaux résultats satisfaisants, une reprise sera nécessaire lors de la prochaine campagne. Ceux découverts récemment demandent une étude plus approfondie. Cette année, la prospection s’est limitée à la partie ouest de la commune d’Ussel, dans la zone de renc...

  9. Contagion processes on urban bus networks in Indian cities

    CERN Document Server

    Chatterjee, Atanu; Jagannathan, Krishna

    2015-01-01

    Bus transportation is considered as one of the most convenient and cheapest modes of public transportation in Indian cities. Due to their cost-effectiveness and wide reachability, they help a significant portion of the human population in cities to reach their destinations every day. Although from a transportation point of view they have numerous advantages over other modes of public transportation, they also pose a serious threat of contagious diseases spreading throughout the city. The presence of numerous local spatial constraints makes the process and extent of epidemic spreading extremely difficult to predict. Also, majority of the studies have focused on the contagion processes on scale-free network topologies whereas, spatially-constrained real-world networks such as, bus networks exhibit a wide-spectrum of network topology. Therefore, we aim in this study to understand this complex dynamical process of epidemic outbreak and information diffusion on the bus networks for six different Indian cities usin...

  10. Optimal Locations of Bus Stops Connecting Subways near Urban Intersections

    Directory of Open Access Journals (Sweden)

    Yuan Cui

    2015-01-01

    Full Text Available Unsuitable locations of bus stops which provide feeder transportation connecting subways near urban intersections usually lead to the low efficiency of public transport and level of passenger service. A multiobjective optimization model to distribute such stop locations is proposed to attain the shortest total walk distance of passengers and minimum delay time of cars through intersections and travel time of buses. The Pareto frontier and optimal solutions for the proposed model are given by the distance-based and enumerative methods. The Xizhimen bus stop is selected to implement case studies for verifying the validity of the proposed model. The analysis of sensitivity on possible solutions is also carried out in the case studies. The results show that the proposed model is capable of optimizing the locations of bus stops connecting subways near intersections and helpful to improve the level of passengers service and operational efficiency of public transportation.

  11. American Fuel Cell Bus Project Evaluation. Second Report

    Energy Technology Data Exchange (ETDEWEB)

    Eudy, Leslie [National Renewable Energy Lab. (NREL), Golden, CO (United States); Post, Matthew [National Renewable Energy Lab. (NREL), Golden, CO (United States)

    2015-09-01

    This report presents results of the American Fuel Cell Bus (AFCB) Project, a demonstration of fuel cell electric buses operating in the Coachella Valley area of California. The prototype AFCB was developed as part of the Federal Transit Administration's (FTA's) National Fuel Cell Bus Program. Through the non-profit consortia CALSTART, a team led by SunLine Transit Agency and BAE Systems developed a new fuel cell electric bus for demonstration. SunLine added two more AFCBs to its fleet in 2014 and another in 2015. FTA and the AFCB project team are collaborating with the U.S. Department of Energy (DOE) and DOE's National Renewable Energy Laboratory to evaluate the buses in revenue service. This report summarizes the performance results for the buses through June 2015.

  12. High Performance BDR for the PCU of AlphaBus

    Science.gov (United States)

    Subrier, Laurent; Besdel, Patrick; Daubresse, Thierry; Trehet, Eric

    2008-09-01

    Very high-power satellites for Telecom missions require 100V bus. Some Telecom payloads may be used in TDMA mode with a power modulation up to 30% of the Payload power. Full performance of the PCU is required in this case even in eclipse mode. It is clear that this requirement is very demanding especially for the BDR design.100V bus system leads making this requirement more difficult as Bus and Battery short-circuit protections have to operate under a voltage of 100V. This paper describes first the overall BDR design with a special focus on the innovative battery short-circuit protection that is not achieved by a "classical" series SSPC on the battery line.The constraints brought by the TDMA mode are detailed, especially on the input filter of the BDR in presence of large battery inductance. The solution developed to cope with large TDMA current is then presented with the associated TDMA performance.

  13. Bar instabilities in Coma cluster galaxies

    International Nuclear Information System (INIS)

    The radial distribution of bar versus nonbar galaxies within the Coma cluster shows that a significantly larger fraction of bar galaxies are members of the cluster core. This result can be used either to estimate the time scale for the decay of bar instabilities or to argue that galaxies in the core of Coma are confined within the core

  14. While in Shanghai,Enjoy Unigue Bars!

    Institute of Scientific and Technical Information of China (English)

    1999-01-01

    Today, bars are nothingnew for people who live inmajor cities. Bars have becomeso common that they have toseek a revolution for survival.It seems the only way tosurvive the fierce market competitionis to take the lead in being special. Asa result, some bars are attractingcustomers with unique features.Among them are:

  15. Bar code instrumentation for nuclear safeguards

    International Nuclear Information System (INIS)

    This paper presents a brief overview of the basic principles of bar codes and the equipment used to make and to read bar code labels, and a summary of some of the more important factors that need to be considered in integrating bar codes into an information system

  16. Distributed cooperative synchronization strategy for multi-bus microgrids

    DEFF Research Database (Denmark)

    Sun, Yao; Zhong, Chaolu; Hou, Xiaochao;

    2017-01-01

    synchronization methods based on centralized communication are very costly and not suitable for multi-bus microgrids that have a large number of distributed generators (DGs). To address this concern, this study presents an active synchronization control strategy based on distributed cooperation technology...... for multi-bus microgrids. The proposed method can reconnect the microgrid in island to UG seamlessly with sparse communication channels. Synchronization correction signals are generated by a voltage controller, which are only transmitted to the leader DGs. Meanwhile, each DG exchanges information with its...

  17. Persecution as a Theme in Isaac Bashevis Singer's The Bus

    Institute of Scientific and Technical Information of China (English)

    Wu Minzhi

    2008-01-01

    Isaac Bashevis Singer is very much concerned about the fate of Jewish people,so he often presents Jews'sufferings in his literary works.The Bus,by means of describing the narrator's experiences during a bus tour through Spain,in different dimensions reinforces the destructive impact of persecution that Jews have gone through.Moreover,he implies such persecution is not merely confined between Jews and the Gentile,but also spreads among the whole human beings who hold differet beliefs.

  18. Exon Expression and Alternatively Spliced Genes in Tourette Syndrome

    NARCIS (Netherlands)

    Tian, Yingfang; Liao, Isaac H.; Zhan, Xinhua; Gunther, Joan R.; Ander, Bradley P.; Liu, Dazhi; Lit, Lisa; Jickling, Glen C.; Corbett, Blythe A.; Bos-Veneman, Netty G. P.; Hoekstra, Pieter J.; Sharp, Frank R.

    2011-01-01

    Tourette Syndrome (TS) is diagnosed based upon clinical criteria including motor and vocal tics. We hypothesized that differences in exon expression and splicing might be useful for pathophysiology and diagnosis. To demonstrate exon expression and alternatively spliced gene differences in blood of i

  19. A Broad Set of Chromatin Factors Influences Splicing

    Science.gov (United States)

    Allemand, Eric; Myers, Michael P.; Garcia-Bernardo, Jose; Harel-Bellan, Annick; Krainer, Adrian R.; Muchardt, Christian

    2016-01-01

    Several studies propose an influence of chromatin on pre-mRNA splicing, but it is still unclear how widespread and how direct this phenomenon is. We find here that when assembled in vivo, the U2 snRNP co-purifies with a subset of chromatin-proteins, including histones and remodeling complexes like SWI/SNF. Yet, an unbiased RNAi screen revealed that the outcome of splicing is influenced by a much larger variety of chromatin factors not all associating with the spliceosome. The availability of this broad range of chromatin factors impacting splicing further unveiled their very context specific effect, resulting in either inclusion or skipping, depending on the exon under scrutiny. Finally, a direct assessment of the impact of chromatin on splicing using an in vitro co-transcriptional splicing assay with pre-mRNAs transcribed from a nucleosomal template, demonstrated that chromatin impacts nascent pre-mRNP in their competence for splicing. Altogether, our data show that numerous chromatin factors associated or not with the spliceosome can affect the outcome of splicing, possibly as a function of the local chromatin environment that by default interferes with the efficiency of splicing. PMID:27662573

  20. Quantitative regulation of alternative splicing in evolution and development

    DEFF Research Database (Denmark)

    Irimia, Manuel; Rukov, Jakob L; Roy, Scott W;

    2009-01-01

    Alternative splicing (AS) is a widespread mechanism with an important role in increasing transcriptome and proteome diversity by generating multiple different products from the same gene. Evolutionary studies of AS have focused primarily on the conservation of alternatively spliced sequences...... layer in complex gene regulatory networks and in the emergence of genetic novelties....

  1. Tissue-specific splicing factor gene expression signatures

    NARCIS (Netherlands)

    A.R. Grosso; A.Q. Gomes (Anita); N.L. Barbosa-Morais (Nuno); S. Caldeira (Sandra); N.P. Thorne (Natalie); G. Grech (Godfrey); M.M. von Lindern (Marieke); M. Carmo-Fonseca (Maria)

    2008-01-01

    textabstractThe alternative splicing code that controls and coordinates the transcriptome in complex multicellular organisms remains poorly understood. It has long been argued that regulation of alternative splicing relies on combinatorial interactions between multiple proteins, and that tissue-spec

  2. Synaptic signaling and aberrant RNA splicing in autism spectrum disorders

    OpenAIRE

    Ryan M Smith; Wolfgang eSadee

    2011-01-01

    Interactions between presynaptic and postsynaptic cellular adhesion molecules drive synapse maturation during development. These trans-synaptic interactions are regulated by alternative splicing of cellular adhesion molecule RNAs, which ultimately determines neurotransmitter phenotype. The diverse assortment of RNAs produced by alternative splicing generates countless protein isoforms necessary for guiding specialized cell-to-cell connectivity. Failure to generate the appropriate synaptic ...

  3. Kluyveromyces lactis maintains Saccharomyces cerevisiae intron-encoded splicing signals.

    OpenAIRE

    Deshler, J O; Larson, G P; Rossi, J J

    1989-01-01

    The actin (ACT) gene from the budding yeast Kluyveromyces lactis was cloned, and the nucleotide sequence was determined. The gene had a single intron 778 nucleotides in length which possessed the highly conserved splicing signals found in Saccharomyces cerevisiae introns. We demonstrated splicing of heterologous ACT transcripts in both K. lactis and S. cerevisiae.

  4. Improving student bus-riding behavior through a whole-school intervention.

    OpenAIRE

    Putnam, Robert F; Handler, Marcie W; Ramirez-Platt, Christina M; Luiselli, James K

    2003-01-01

    We describe a multicomponent intervention to improve bus-riding behavior of students attending an urban public school. The intervention was developed with technical assistance consultation that emphasized collaboration among students, school personnel, and bus drivers. The primary intervention procedures were identifying appropriate behaviors during transportation ("bus rules"), training bus drivers to deliver positive reinforcement, and rewarding student performance through a weekly school-b...

  5. Bus Catcher: A Context Sensitive Prototype System for Public Transportation Users

    OpenAIRE

    Bertolotto, Michela; O'Hare, G.M.P.; Strahan, Robin; Brophy, Ailish; Martin, A.; McLoughlin, Eoin

    2002-01-01

    In this paper we describe the architectural and functional characteristics of Bus Catcher, a context sensitive prototype system for public transportation users. Bus Catcher assists mobile users in planning their bus rides by providing timely and accurate information about current bus locations and estimated arrival times. A complete report on the implementation together with a preliminary evaluation of the system is provided in this paper.

  6. Performance evaluation of UHF RFID technologies for real-time bus recognition in the Taipei Bus Station.

    Science.gov (United States)

    Own, Chung-Ming; Lee, Da-Sheng; Wang, Ti-Ho; Wang, De-Jun; Ting, Yu-Lun

    2013-06-18

    Transport stations such as airports, ports, and railways have adopted blocked-type pathway management to process and control travel systems in a one-directional manner. However, this excludes highway transportation where large buses have great variability and mobility; thus, an instant influx of numerous buses increases risks and complicates station management. Focusing on Taipei Bus Station, this study employed RFID technology to develop a system platform integrated with modern information technology that has numerous characteristics. This modern information technology comprised the following systems: ultra-high frequency (UHF) radio-frequency identification (RFID), ultrasound and license number identification, and backstage graphic controls. In conclusion, the system enabled management, bus companies, and passengers to experience the national bus station's new generation technology, which provides diverse information and synchronization functions. Furthermore, this technology reached a new milestone in the energy-saving and efficiency-increasing performance of Taiwan's buses.

  7. [Statistical analysis of DNA sequences nearby splicing sites].

    Science.gov (United States)

    Korzinov, O M; Astakhova, T V; Vlasov, P K; Roĭtberg, M A

    2008-01-01

    Recognition of coding regions within eukaryotic genomes is one of oldest but yet not solved problems of bioinformatics. New high-accuracy methods of splicing sites recognition are needed to solve this problem. A question of current interest is to identify specific features of nucleotide sequences nearby splicing sites and recognize sites in sequence context. We performed a statistical analysis of human genes fragment database and revealed some characteristics of nucleotide sequences in splicing sites neighborhood. Frequencies of all nucleotides and dinucleotides in splicing sites environment were computed and nucleotides and dinucleotides with extremely high\\low occurrences were identified. Statistical information obtained in this work can be used in further development of the methods of splicing sites annotation and exon-intron structure recognition.

  8. Comparative Analysis of Splice Site Regions by Information Content

    Institute of Scientific and Technical Information of China (English)

    T. Shashi Rekha; Chanchal K. Mitra

    2006-01-01

    We have applied concepts from information theory for a comparative analysis of donor (gt) and acceptor (ag) splice site regions in the genes of five different organisms by calculating their mutual information content (relative entropy) over a selected block of nucleotides. A similar pattern that the information content decreases as the block size increases was observed for both regions in all the organisms studied. This result suggests that the information required for splicing might be contained in the consensus of ~6-8 nt at both regions. We assume from our study that even though the nucleotides are showing some degrees of conservation in the flanking regions of the splice sites, certain level of variability is still tolerated,which leads the splicing process to occur normally even if the extent of base pairing is not fully satisfied. We also suggest that this variability can be compensated by recognizing different splice sites with different spliceosomal factors.

  9. Splice Site Mutations in the ATP7A Gene

    DEFF Research Database (Denmark)

    Skjørringe, Tina; Tümer, Zeynep; Møller, Lisbeth Birk

    2011-01-01

    Menkes disease (MD) is caused by mutations in the ATP7A gene. We describe 33 novel splice site mutations detected in patients with MD or the milder phenotypic form, Occipital Horn Syndrome. We review these 33 mutations together with 28 previously published splice site mutations. We investigate 12...... mutations for their effect on the mRNA transcript in vivo. Transcriptional data from another 16 mutations were collected from the literature. The theoretical consequences of splice site mutations, predicted with the bioinformatics tool Human Splice Finder, were investigated and evaluated in relation...... to in vivo results. Ninety-six percent of the mutations identified in 45 patients with classical MD were predicted to have a significant effect on splicing, which concurs with the absence of any detectable wild-type transcript in all 19 patients investigated in vivo. Sixty-seven percent of the mutations...

  10. Minor class splicing shapes the zebrafish transcriptome during development

    DEFF Research Database (Denmark)

    Markmiller, Sebastian; Cloonan, Nicole; Lardelli, Rea M;

    2014-01-01

    known as Taybi-Linder syndrome or microcephalic osteodysplastic primordial dwarfism 1, and a hereditary intestinal polyposis condition, Peutz-Jeghers syndrome. Although a key mechanism for regulating gene expression, the impact of impaired U12-type splicing on the transcriptome is unknown. Here, we......, we show that multiple genes involved in various steps of mRNA processing, including transcription, splicing, and nuclear export are disrupted in clbn, either through intron retention or differential gene expression. Thus, clbn provides a useful and specific model of aberrant U12-type splicing in vivo......Minor class or U12-type splicing is a highly conserved process required to remove a minute fraction of introns from human pre-mRNAs. Defects in this splicing pathway have recently been linked to human disease, including a severe developmental disorder encompassing brain and skeletal abnormalities...

  11. BARS curve in Romanian economy

    OpenAIRE

    Emilian Dobrescu

    2015-01-01

    The paper is consacrated to the binomial “public budget-global output” from the BARS curve perspective. The first section characterizes the main conceptual premises of this approach. The second is devoted to empirical analysis, using the statistical data (1990- 2013) for Romania, an European emergent economy: three cointegrating regressions (fully modified least squares, canonical cointegrating regression and dynamic least squares) and three algorithms based on instrumental variables (two-sta...

  12. Galaxy Zoo: Observing secular evolution through bars

    International Nuclear Information System (INIS)

    In this paper, we use the Galaxy Zoo 2 data set to study the behavior of bars in disk galaxies as a function of specific star formation rate (SSFR) and bulge prominence. Our sample consists of 13,295 disk galaxies, with an overall (strong) bar fraction of 23.6% ± 0.4%, of which 1154 barred galaxies also have bar length (BL) measurements. These samples are the largest ever used to study the role of bars in galaxy evolution. We find that the likelihood of a galaxy hosting a bar is anticorrelated with SSFR, regardless of stellar mass or bulge prominence. We find that the trends of bar likelihood and BL with bulge prominence are bimodal with SSFR. We interpret these observations using state-of-the-art simulations of bar evolution that include live halos and the effects of gas and star formation. We suggest our observed trends of bar likelihood with SSFR are driven by the gas fraction of the disks, a factor demonstrated to significantly retard both bar formation and evolution in models. We interpret the bimodal relationship between bulge prominence and bar properties as being due to the complicated effects of classical bulges and central mass concentrations on bar evolution and also to the growth of disky pseudobulges by bar evolution. These results represent empirical evidence for secular evolution driven by bars in disk galaxies. This work suggests that bars are not stagnant structures within disk galaxies but are a critical evolutionary driver of their host galaxies in the local universe (z < 1).

  13. Evolution of alternative splicing regulation: changes in predicted exonic splicing regulators are not associated with changes in alternative splicing levels in primates

    DEFF Research Database (Denmark)

    Irimia, Manuel; Rukov, Jakob Lewin; Roy, Scott William

    2009-01-01

    interspecific differences in these elements on the evolution of alternative splicing levels has not yet been investigated at genomic level. Here we study the effect of interspecific differences in predicted exonic splicing regulators (ESRs) on exon inclusion levels in human and chimpanzee. For this purpose, we...... compiled and studied comprehensive datasets of predicted ESRs, identified by several computational and experimental approaches, as well as microarray data for changes in alternative splicing levels between human and chimpanzee. Surprisingly, we found no association between changes in predicted ESRs and...... or no effect on splicing, and thus interspecific changes at short-time scales may primarily occur in these effectively neutral ESRs. These results underscore the difficulties of using current computational ESR prediction algorithms to identify truly functionally important motifs, and provide a...

  14. MSCT findings in a controlled bus bombing using a pig model

    DEFF Research Database (Denmark)

    Hansen, Nikolaj Friis

    2009-01-01

    pig's position in the bus at the time of detonation. 1 of the pigs was rigged as a suicide bomber while the others were individually placed as passengers and bus driver inside the bus alongside dummies. Measurements of the blast force and fast speed video recordings were made during the detonation...

  15. 49 CFR 571.221 - Standard No. 221; School bus body joint strength.

    Science.gov (United States)

    2010-10-01

    ... means any part of the bus, of either a mechanical or electrical nature, which is explicitly identified... 49 Transportation 6 2010-10-01 2010-10-01 false Standard No. 221; School bus body joint strength... STANDARDS Federal Motor Vehicle Safety Standards § 571.221 Standard No. 221; School bus body joint...

  16. 46 CFR 112.05-3 - Main-emergency bus-tie.

    Science.gov (United States)

    2010-10-01

    ... 46 Shipping 4 2010-10-01 2010-10-01 false Main-emergency bus-tie. 112.05-3 Section 112.05-3 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) ELECTRICAL ENGINEERING EMERGENCY LIGHTING AND POWER SYSTEMS General § 112.05-3 Main-emergency bus-tie. Each bus-tie between a main...

  17. Texas Hydrogen Highway Fuel Cell Hybrid Bus and Fueling Infrastructure Technology Showcase - Final Scientific/Technical Report

    Energy Technology Data Exchange (ETDEWEB)

    Hitchcock, David

    2012-06-29

    , and regenerative braking for battery charging. It uses a 19.3 kW Ballard PEM fuel cell, will store 12.6 kg of hydrogen at 350 Bar, and includes a 60 kWh battery storage system. The objectives of the project included the following: (a) To advance commercialization of hydrogen-powered transit buses and supporting infrastructure; (b) To provide public outreach and education by showcasing the operation of a 22-foot fuel cell hybrid shuttle bus and Texas first hydrogen fueling infrastructure; and (c) To showcase operation of zero-emissions vehicle for potential transit applications. As mentioned above, the project successfully demonstrated an early vehicle technology, the Ebus plug-in hybrid fuel cell bus, and that success has led to the acquisition of a more advanced vehicle that can take advantage of the same fueling infrastructure. Needed hydrogen station improvements have been identified that will enhance the capabilities of the fueling infrastructure to serve the new bus and to meet the transit agency needs. Over the course of this project, public officials, local government staff, and transit operators were engaged in outreach and education activities that acquainted them with the real world operation of a fuel cell bus and fueling infrastructure. Transit staff members in the Dallas/Ft. Worth region were invited to a workshop in Arlington, Texas at the North Central Texas Council of Governments to participate in a workshop on hydrogen and fuel cells, and to see the fuel cell bus in operation. The bus was trucked to the meeting for this purpose so that participants could see and ride the bus. Austin area transit staff members visited the fueling site in Austin to be briefed on the bus and to participate in a fueling demonstration. This led to further meetings to determine how a fuel cell bus and fueling station could be deployed at Capital Metro Transit. Target urban regions that expressed additional interest during the project in response to the outreach meetings and

  18. Effect of bars on the galaxy properties

    CERN Document Server

    Vera, Matias; Coldwell, Georgina

    2016-01-01

    Aims: With the aim of assessing the effects of bars on disc galaxy properties, we present an analysis of different characteristics of spiral galaxies with strong, weak and without bars. Method: We identified barred galaxies from the Sloan Digital Sky Survey. By visual inspection, we classified the face-on spiral galaxies brighter than g<16.5 mag into strong-bar, weak-bar and unbarred. In order to provide an appropiate quantification of the influence of bars on galaxy properties, we also constructed a suitable control sample of unbarred galaxies with similar redshift, magnitude, morphology, bulge sizes, and local density environment distributions to that of barred galaxies. Results: We found 522 strong-barred and 770 weak-barred galaxies, representing a 25.82% of the full sample of spiral galaxies, in good agreement with previous studies. We also found that strong-barred galaxies show less efficient star formation activity and older stellar populations compared to weak-barred and unbarred spirals from the c...

  19. WT1 interacts with the splicing protein RBM4 and regulates its ability to modulate alternative splicing in vivo

    International Nuclear Information System (INIS)

    Wilm's tumor protein 1 (WT1), a protein implicated in various cancers and developmental disorders, consists of two major isoforms: WT1(-KTS), a transcription factor, and WT1(+KTS), a post-transcriptional regulator that binds to RNA and can interact with splicing components. Here we show that WT1 interacts with the novel splicing regulator RBM4. Each protein was found to colocalize in nuclear speckles and to cosediment with supraspliceosomes in glycerol gradients. RBM4 conferred dose-dependent and cell-specific regulation of alternative splicing of pre-mRNAs transcribed from several reporter genes. We found that overexpressed WT1(+KTS) abrogated this effect of RBM4 on splice-site selection, whereas WT1(-KTS) did not. We conclude that the (+KTS) form of WT1 is able to inhibit the effect of RBM4 on alternative splicing

  20. Irradiation test of bar code label

    International Nuclear Information System (INIS)

    The irradiation test of bar code label tagged on radioactive waste container was done to determine the effect of radiation. Low and medium radioactive waste is that below total activity of 4,000Bq/g according to the Korean nuclear law. The irradiation amount to radiate bar code label tagged on radioactive waste container was calculated by MCNP-4b computer code. The nuclide such as Co-60 and Cs-137 was assumed to contribute 50 % of total activity. Real irradiation amount for bar code label was finally calculated by the dimensions of the container and the bar code label. The identification of post and the physical deflection of irradiated bar code label was tested by the bar code reader. The coated bar code label was suitable to use on low and medium radioactive waste container

  1. How to Cut Costs by Saving School Bus Fuel.

    Science.gov (United States)

    Seiff, Hank

    A program started in Washington County, Maryland in 1980 has been successful in saving school bus fuel and bringing down transportation costs incurred by its fleet of 200 buses. Driver training and motivation, as well as a partial transfer to diesel buses, are at the heart of the program. The drivers are taught five fuel saving techniques: cut…

  2. Bullying on the School Bus: A Video Analysis

    Science.gov (United States)

    Raskauskas, Juliana

    2005-01-01

    The purpose of this study was to assess the nature of bullying on the school bus. Videotapes were used to identify occurrences of bullying on buses of elementary school students. Incidents were reviewed for forms of bullying, fullness, presence of friends, and severity of acts. Results indicated that approximately two incidents occurred per bus…

  3. Bussikontsern Go Bus ihaldab Harjumaa turgu / Signe Kalberg

    Index Scriptorium Estoniae

    Kalberg, Signe, 1959-

    2005-01-01

    AS-i Tarbus ja kaheksa bussiettevõtte ühinemisel moodustati AS Go Bus, ettevõte plaanib veel mitme bussifirma liitmist. Atko Grupi juhatuse esimehe Margo Tomingase, AS Sebe nõukogu esimehe Hugo Osula arvamus. Lisa: Konkurentsiamet hoiab silma peal

  4. Overview of Multi-DC-Bus Solutions for DC Microgrids

    DEFF Research Database (Denmark)

    Ricchiuto, D.; Mastromauro, R.A.; Liserre, Marco;

    2013-01-01

    DC Microgrids have recently received a lot of attention in the last years due to high penetration of renewable energy sources as well as distributed energy storage systems. In the future DC microgrids could be preferable respect to AC microgrids in terms of redundancy since multi-DC-Bus solutions...

  5. What's Happening on the School Bus Performance Front?

    Science.gov (United States)

    Combs, Hanford L.

    The most urgent order of business in the national scene is to complete the development of a series of new performance tests for school bus bodies and chassis to establish a benchmark for safe construction that can be verified by independent testing agencies. Such performance tests should incorporate the new Federal Joint Strength Efficiency…

  6. High-Tech School Bus Teaches Students on the Road

    Science.gov (United States)

    Katims, Lauren

    2011-01-01

    Last year, kindergarten through high school students in the rural Hector, Arkansas, School District barely had the technology resources that keep kids interested in math and science. This year, they potentially have the most advanced resources in the country--before they even step into the classroom. One school bus in Arkansas' Pope County has…

  7. A Novel Time Synchronization Method for Dynamic Reconfigurable Bus

    Directory of Open Access Journals (Sweden)

    Zhang Weigong

    2016-01-01

    Full Text Available UM-BUS is a novel dynamically reconfigurable high-speed serial bus for embedded systems. It can achieve fault tolerance by detecting the channel status in real time and reconfigure dynamically at run-time. The bus supports direct interconnections between up to eight master nodes and multiple slave nodes. In order to solve the time synchronization problem among master nodes, this paper proposes a novel time synchronization method, which can meet the requirement of time precision in UM-BUS. In this proposed method, time is firstly broadcasted through time broadcast packets. Then, the transmission delay and time deviations via three handshakes during link self-checking and channel detection can be worked out referring to the IEEE 1588 protocol. Thereby, each node calibrates its own time according to the broadcasted time. The proposed method has been proved to meet the requirement of real-time time synchronization. The experimental results show that the synchronous precision can achieve a bias less than 20 ns.

  8. Platform Screen Doors Enhanced Bus Rapid Transit Intelligent Performance

    Directory of Open Access Journals (Sweden)

    Chonghua Zhou

    2011-06-01

    Full Text Available It is the last straw to clutch at to solve the urban traffic issue, to develop high-capacity rapid transit and promote transit priority. Characterized by low cost, short construction cycle and flexible development, Bus Rapid Transit (BRT has been favored by more and more cities in the world. The Platform Screen Doors (PSDs system is an important component at BRT stations, and it is original motive to be designed to satisfy the growing demand from BRT application to provide increased safety and comfort in the first. With the continual increased demand for BRT intelligent performance, the PSDs system is applied to get Bus Location Information with accurate position of arrival and departure at stop, to provide Real-Time Information (RTI for BRT passengers using PSDs/GPS compound location technology, to put into practice Bus Fleet Management (BFM. Considering the capability of accurate location, it can be applied to actualize Bus Sign Priority in the future. The authors are luck to take in part the practice of BRT system, especially in the BRT intelligent systems, the papers will introduce upwards application and conceive in detail.

  9. Measurements on and simulations of a biogas-fuelled bus

    International Nuclear Information System (INIS)

    Mathematical models for torque/fuel consumption and emissions have been studied for a biogas-fuelled bus used in urban traffic in Linkoeping, Sweden. It is noted that the cycle ECE R-49 is not representative for city buses, but that the Braunschweig cycle gives rather good agreement. 2 refs, 37 figs

  10. Measuring Bus Drivers' Occupational Stress Under Changing Working Conditions

    NARCIS (Netherlands)

    Hlotova, Y.; Cats, O.; Meijer, S.A.

    2014-01-01

    Stress is an immense problem in modern society; approximately half of all occupational illnesses are directly or indirectly related to stress. The work of a bus driver is typically associated with high stress levels that negatively influence individual well-being as well as workforce management. The

  11. GeoBus: sharing science research with schools

    Science.gov (United States)

    Roper, Kathryn; Robinson, Ruth; Moorhouse, Ben

    2016-04-01

    GeoBus (www.geobus.org.uk) is an educational outreach project that was developed in 2012 by the Department of Earth and Environmental Sciences at the University of St Andrews, and it is currently sponsored by industry, NERC, The Crown Estate, and the Scottish Government. The aims of GeoBus are to support the teaching of Earth Science in secondary (middle and high) schools by providing teaching support to schools that have little or no experience in teaching this subject. This is, in part, done through the sharing of new science research outcomes and the experiences of young researchers with school pupils to provide a bridge between industry, higher education institutions, research councils and schools. Since its launch, over 40,000 pupils will have been involved in experiential Earth science learning activities in 190 different schools (over 400 separate visits) across the length and breadth of Scotland: many of these schools are in remote and disadvantaged regions. A new GeoBus project is under development within the Department of Earth Sciences at UCL in London. A key aim of GeoBus is to incorporate new research into our workshops with the main challenge being the development of appropriate resources that incorporate the key learning aims and requirements of the science and geography curricula. GeoBus works closely with researchers, teachers and educational practitioners to tailor the research outcomes to the curricula as much as possible. Over the past four years, GeoBus has developed 17 workshops, 5 challenge events and extensive field trips and each of these activities are trialled and evaluated within the university, and adjustments are made before the activities are delivered in schools. Activities are continually reviewed and further developments are made in response to both teacher and pupil feedback. This critical reflection of the project's success and impact is important to insure a positive and significant contribution to the science learning in

  12. Real life testing of a Hybrid PEM Fuel Cell Bus

    Science.gov (United States)

    Folkesson, Anders; Andersson, Christian; Alvfors, Per; Alaküla, Mats; Overgaard, Lars

    Fuel cells produce low quantities of local emissions, if any, and are therefore one of the most promising alternatives to internal combustion engines as the main power source in future vehicles. It is likely that urban buses will be among the first commercial applications for fuel cells in vehicles. This is due to the fact that urban buses are highly visible for the public, they contribute significantly to air pollution in urban areas, they have small limitations in weight and volume and fuelling is handled via a centralised infrastructure. Results and experiences from real life measurements of energy flows in a Scania Hybrid PEM Fuel Cell Concept Bus are presented in this paper. The tests consist of measurements during several standard duty cycles. The efficiency of the fuel cell system and of the complete vehicle are presented and discussed. The net efficiency of the fuel cell system was approximately 40% and the fuel consumption of the concept bus is between 42 and 48% lower compared to a standard Scania bus. Energy recovery by regenerative braking saves up 28% energy. Bus subsystems such as the pneumatic system for door opening, suspension and brakes, the hydraulic power steering, the 24 V grid, the water pump and the cooling fans consume approximately 7% of the energy in the fuel input or 17% of the net power output from the fuel cell system. The bus was built by a number of companies in a project partly financed by the European Commission's Joule programme. The comprehensive testing is partly financed by the Swedish programme "Den Gröna Bilen" (The Green Car). A 50 kW el fuel cell system is the power source and a high voltage battery pack works as an energy buffer and power booster. The fuel, compressed hydrogen, is stored in two high-pressure stainless steel vessels mounted on the roof of the bus. The bus has a series hybrid electric driveline with wheel hub motors with a maximum power of 100 kW. Hybrid Fuel Cell Buses have a big potential, but there are

  13. Energy Performance Optimization of a Bus for Urban Public Transport

    Directory of Open Access Journals (Sweden)

    Paola Gori

    2013-08-01

    Full Text Available Nowadays many people use public transports in urban centres. Consequently, every day a lot of buses move within cities, trying to ensure the best service to citizens. During the year buses becomecrowded places and using an air conditioning system in constant operation, it tries to ensure a certain condition of comfort for the passengers on board. The aim of this study is to analyse and optimize the energy performance of a bus shell, identifying practical solutions that have not yet been adopted in order to reduce the impact of air conditioning on bus consumption and, therefore, on air pollution. For this reason it was decided to conduct a thermal analysis of a bus for public transport, in order to understandthe behaviour of the bus shell and to deduce possible optimization measures that have not yet been made until now. The analysis was carried out considering the hottest day of July and the coldest day ofJanuary, considering the conditions of operation based on the most common graphics TGM able to define the concentration of traffic city during the 24 hours per day. The study was done using the dynamicsimulation software TRNSYS. With this software it was possible to recreate faithfully the structure of the bus and the external environmental conditions, assessing the impact of different technical solutions for an improvement of internal conditions and a reduction of the cooling capacity required. Because the presence of passengers in public transport is considered like a “benefit” during the winter, the analysis started with the identification of a summer solution and the subsequent evaluation of this solution for the wintertime. The aim of this study was to optimize the bus shell and select the most appropriate solutions. Regarding the transparent surfaces it has been given importance to factors such as the thermal transmittance and the solar gain factor (g-value. Aware of the influence given by the solar radiation on the energy loads, we

  14. In vitro Splicing of Influenza Viral NS1 mRNA and NS1-β -globin Chimeras: Possible Mechanisms for the Control of Viral mRNA Splicing

    Science.gov (United States)

    Plotch, Stephen J.; Krug, Robert M.

    1986-08-01

    In influenza virus-infected cells, the splicing of the viral NS1 mRNA catalyzed by host nuclear enzymes is controlled so that the steady-state amount of the spliced NS2 mRNA is only 5-10% of that of the unspliced NS1 mRNA. Here we examine the splicing of NS1 mRNA in vitro, using nuclear extracts from HeLa cells. We show that in addition to its consensus 5' and 3' splice sites, NS1 mRNA has an intron branch-point adenosine residue that was functional in lariat formation. Nonetheless, this RNA was not detectably spliced in vitro under conditions in which a human β -globin precursor was efficiently spliced. Using chimeric RNA precursors containing both NS1 and β -globin sequences, we show that the NS1 5' splice site was effectively utilized by the β -globin branch-point sequence and 3' splice site to form a spliced RNA, whereas the NS1 3' splice site did not function in detectable splicing in vitro, even in the presence of the β -globin branch-point sequence or in the presence of both the branch-point sequence and 5' exon and splice site from β -globin With the chimeric precursors that were not detectably spliced, as with NS1 mRNA itself, a low level of a lariat structure containing only intron and not 3' exon sequences was formed. The inability of the consensus 3' splice site of NS1 mRNA to function effectively in in vitro splicing suggests that this site is structurally inaccessible to components of the splicing machinery. Based on these results, we propose two mechanisms whereby NS1 mRNA splicing in infected cells is controlled via the accessibility of its 3' splice site.

  15. SunLine Transit Agency Advanced Technology Fuel Cell Bus Evaluation: First Results Report

    Energy Technology Data Exchange (ETDEWEB)

    Eudy, L.; Chandler, K.

    2011-03-01

    This report describes operations at SunLine Transit Agency for their newest prototype fuel cell bus and five compressed natural gas (CNG) buses. In May 2010, SunLine began operating its sixth-generation hydrogen fueled bus, an Advanced Technology (AT) fuel cell bus that incorporates the latest design improvements to reduce weight and increase reliability and performance. The agency is collaborating with the U.S. Department of Energy's (DOE) National Renewable Energy Laboratory (NREL) to evaluate the bus in revenue service. This report provides the early data results and implementation experience of the AT fuel cell bus since it was placed in service.

  16. Implementation of an AMBA Advanced High Performance Bus protocol IP block

    OpenAIRE

    Mahendra Vucha Sandeep Magarde; Miss. Shruti Bhargava; Rishabh Singh Kurmi

    2011-01-01

    The design of an AMBA advanced high performance bus (AHB) protocol IP block is presented in this paper. The AHB (Advanced High-performance Bus) is a high-performance bus in AMBA (Advanced Microcontroller Bus Architecture) family. This AHB can be used in high clock frequency system modules. The AHB acts as the high-performance system backbone bus. AHB supports the efficient connection of processors, on-chip memories and off-chip external memory interfaces with low-power peripheral macro cell f...

  17. Regulation of Telomerase Alternative Splicing: A Target for Chemotherapy

    Directory of Open Access Journals (Sweden)

    Mandy S. Wong

    2013-04-01

    Full Text Available Telomerase is present in human cancer cells but absent in most somatic tissues. The messenger RNA of human telomerase (hTERT is alternatively spliced into mostly nonfunctional products. We sought to understand splicing so that we could decrease functional splice isoforms to reduce telomerase activity in order to complement direct enzyme inhibition. Unexpectedly, minigenes containing hTERT exons 5–10 flanked by 150–300 bp intronic sequences did not produce alternative splicing. A 1.1 kb region of 38 bp repeats ∼2 kb from the exon 6/intron junction restored the exclusion of exons 7 and 8. An element within intron 8, also >1 kb from intron/exon junctions, modulated this effect. Transducing an oligonucleotide complementary to this second element increased nonfunctional hTERT messenger RNA from endogenous telomerase. These results demonstrate the potential of manipulating hTERT splicing for both chemotherapy and regenerative medicine and provide specific sequences deep within introns that regulate alternative splicing in mammalian cells by mechanisms other than the introduction of cryptic splice sites.

  18. An alternative splicing program promotes adipose tissue thermogenesis

    Science.gov (United States)

    Vernia, Santiago; Edwards, Yvonne JK; Han, Myoung Sook; Cavanagh-Kyros, Julie; Barrett, Tamera; Kim, Jason K; Davis, Roger J

    2016-01-01

    Alternative pre-mRNA splicing expands the complexity of the transcriptome and controls isoform-specific gene expression. Whether alternative splicing contributes to metabolic regulation is largely unknown. Here we investigated the contribution of alternative splicing to the development of diet-induced obesity. We found that obesity-induced changes in adipocyte gene expression include alternative pre-mRNA splicing. Bioinformatics analysis associated part of this alternative splicing program with sequence specific NOVA splicing factors. This conclusion was confirmed by studies of mice with NOVA deficiency in adipocytes. Phenotypic analysis of the NOVA-deficient mice demonstrated increased adipose tissue thermogenesis and improved glycemia. We show that NOVA proteins mediate a splicing program that suppresses adipose tissue thermogenesis. Together, these data provide quantitative analysis of gene expression at exon-level resolution in obesity and identify a novel mechanism that contributes to the regulation of adipose tissue function and the maintenance of normal glycemia. DOI: http://dx.doi.org/10.7554/eLife.17672.001 PMID:27635635

  19. Proximity-dependent and proximity-independent trans-splicing in mammalian cells

    OpenAIRE

    Viles, Kristi D.; Sullenger, Bruce A

    2008-01-01

    Most human pre-mRNAs are cis-spliced, removing introns and joining flanking exons of the same RNA molecule. However, splicing of exons present on separate pre-mRNA molecules can also occur. This trans-splicing reaction can be exploited by pre-trans-splicing molecules (PTMs), which are incapable of cis-splicing. PTM-mediated trans-splicing has been utilized to repair mutant RNAs as a novel approach to gene therapy. Herein we explore how the site of PTM expression influences trans-splicing acti...

  20. Alternative splicing of SMPD1 in human sepsis.

    Directory of Open Access Journals (Sweden)

    Marcel Kramer

    Full Text Available Acid sphingomyelinase (ASM or sphingomyelin phosphodiesterase, SMPD activity engages a critical role for regulation of immune response and development of organ failure in critically ill patients. Beside genetic variation in the human gene encoding ASM (SMPD1, alternative splicing of the mRNA is involved in regulation of enzymatic activity. Here we show that the patterns of alternatively spliced SMPD1 transcripts are significantly different in patients with systemic inflammatory response syndrome and severe sepsis/septic shock compared to control subjects allowing discrimination of respective disease entity. The different splicing patterns might contribute to the better understanding of the pathophysiology of human sepsis.

  1. Two hot spots in China's bus market%中国客车市场呈现两大热点

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    @@ According to an analysis on statistics of production and sales of China's 70 bus enterprises in 2005, bus sales are expected to continue to grow this year, posing a better performance than that in the previous year, and the urban public bus transport, rural bus transport and export together will be a major motive power for pulling up growth of the industry.

  2. Intragenic alternative splicing coordination is essential for Caenorhabditis elegans slo-1 gene function

    OpenAIRE

    Glauser, Dominique A; Johnson, Brandon E.; Aldrich, Richard W; Goodman, Miriam B.

    2012-01-01

    Alternative splicing is critical for diversifying eukaryotic proteomes, but the rules governing and coordinating splicing events among multiple alternate splice sites within individual genes are not well understood. We developed a quantitative PCR-based strategy to quantify the expression of the 12 transcripts encoded by the Caenorhabditis elegans slo-1 gene, containing three alternate splice sites. Using conditional probability-based models, we show that splicing events are coordinated acros...

  3. EVOLUTION OF SR PROTEIN AND HnRNP SPLICING REGULATORY FACTORS

    OpenAIRE

    Busch, A.; Hertel, KJ

    2011-01-01

    The splicing of pre-mRNAs is an essential step of gene expression in eukaryotes. Introns are removed from split genes through the activities of the spliceosome, a large ribonuclear machine that is conserved throughout the eukaryotic lineage. While unicellular eukaryotes are characterized by less complex splicing, pre-mRNA splicing of multicellular organisms is often associated with extensive alternative splicing that significantly enriches their proteome. The alternative selection of splice s...

  4. Editing efficiency of a Drosophila gene correlates with a distant splice site selection

    OpenAIRE

    AGRAWAL, RITESH; Stormo, Gary D.

    2005-01-01

    RNA editing and alternative splicing are two processes that increase protein diversity. The relationship between the two processes is not well understood. There are a few examples of correlations between editing and alternative splicing, but these are all nearby effects. A search for alternative splicing among 16 edited genes in Drosophila reveals two novel instances of alternative splicing. In one example where alternative splicing occurs downstream of editing, a strong correlation between e...

  5. Nascent-seq indicates widespread cotranscriptional pre-mRNA splicing in Drosophila

    OpenAIRE

    Khodor, Yevgenia L.; Rodriguez, Joseph; Abruzzi, Katharine C.; Tang, Chih-Hang Anthony; Marr, Michael T.; Rosbash, Michael

    2011-01-01

    Cotranscriptional splicing, in which mRNA is spliced as it is being transcribed, is thought to be necessary for proper gene regulation of many genes in eukaryotic cells. While studies have shown that splicing takes place cotranscriptionally in yeast, in higher eukaryotes, where genes contain multiple introns with widespread alternative splicing, the question of whether cotranscriptional splicing is a general phenomenon remains. Khodor et al. investigated what fractions of genes are cotranscri...

  6. Epstein-Barr Virus SM Protein Functions as an Alternative Splicing Factor ▿

    OpenAIRE

    Verma, Dinesh; Swaminathan, Sankar

    2008-01-01

    Alternative splicing of RNA increases the coding potential of the genome and allows for additional regulatory control over gene expression. The full extent of alternative splicing remains to be defined but is likely to significantly expand the size of the human transcriptome. There are several examples of mammalian viruses regulating viral splicing or inhibiting cellular splicing in order to facilitate viral replication. Here, we describe a viral protein that induces alternative splicing of a...

  7. On the Fraction of Barred Spiral Galaxies

    CERN Document Server

    Nair, Preethi B

    2010-01-01

    We investigate the stellar masses of strongly barred spiral galaxies. Our analysis is based on a sample of ~14000 visually-classified nearby galaxies given in Nair & Abraham 2010(a). The fraction of barred spiral galaxies is found to be a strong function of stellar mass and star formation history, with a minimum near the characteristic mass at which bimodality is seen in the stellar populations of galaxies. We also find bar fractions are very sensitive to the central concentration of galaxies below the transition mass but not above it. This suggests that whatever process is causing the creation of the red and blue sequences is either influencing, or being influenced by, structural changes which manifest themselves in the absence of bars. As a consequence of strong bar fractions being sensitive to the mass range probed, our analysis helps resolve discrepant results on the reported evolution of bar fractions with redshift.

  8. BaBar Data Aquisition

    CERN Document Server

    Scott, I; Grosso, P; Hamilton, R T; Huffer, M E; O'Grady, C; Russell, J J

    1998-01-01

    The BaBar experiment at the Stanford Linear Accelerator Center is designed to perform a search for CP violation by analysing the decays of a very large sample of B and Bbar mesons produced at the high luminosity PEP-11 accelerator. The data acquisition system must cope with a sustained high event rate, while supporting real time feature extraction and data compression with minimal dead time. The BaBar data acquisition system is based around a common VME interface to the electronics read-out of the separate detector subsystems. Data from the front end electronics is read into commercial VME processors via a custom "personality card" and PCI interface. The commercial CPUs run the Tornado operating system to provide a platform for detector subsystem code to perform the necessary data processing. The data are read out via a non-blocking network switch to a farm of commercial UNIX processors. Careful design of the core data acquisition code has enabled us to sustain events rates in excess of 20 kHz while maintaini...

  9. Results from bar pp colliders

    International Nuclear Information System (INIS)

    Recent results bar pp colliders are presented. From elastic scattering experiments at the Tevatron, an average value of σtot = 72.1±2 mb is reported, along with a new measurement of ρ = 0.13 ± 0.7. New measurements of jet direct photon and high pt W and Z production are compared to more precise, higher order predictions from perturbative QCD. Recently available data on the W mass and width give combined values for MW = 80.14±0.27 GeV/c2, and Γ(W) =2. 14 ± 0.08 GeV. From electroweak radiative corrections and MW, one finds Mtop = 130±40 GeV/c2, with a 95% C.L. upper limit at 210 GeV/c2. Current limits on Mtop are presented, along with a review of the prospects for top discovery. From jet data there is no evidence of quark substructure down to the distance scale of 1.4 x 10-17 cm, nor is there evidence for supersymmetry or heavy gauge bosons at bar pp colliders, allowing lower limits on MW, > 520 GeV/c2 and MZ 412 GeV/c2. 66 refs., 26 figs

  10. Methods of Electro-Dynamic Stability Calculation of Flexible Bus-bars in High Voltage Switch Gears

    Directory of Open Access Journals (Sweden)

    I. I. Sergey

    2010-01-01

    Full Text Available The improved vector-parametrical and simplified methods for calculation of electro-dynamic stability parameters of flexible busbars in high voltage switch gears have been presented in the paper. The developed methods and their software can be taken as a basis of methodological instructions on calculation of short-circuit current electro-dynamic action on flexible conductors of switching gears.

  11. Methods of Electro-Dynamic Stability Calculation of Flexible Bus-bars in High Voltage Switch Gears

    OpenAIRE

    I. I. Sergey; Y. G. Panamarenka; A. S. Mikhalyov

    2010-01-01

    The improved vector-parametrical and simplified methods for calculation of electro-dynamic stability parameters of flexible busbars in high voltage switch gears have been presented in the paper. The developed methods and their software can be taken as a basis of methodological instructions on calculation of short-circuit current electro-dynamic action on flexible conductors of switching gears.

  12. Correction of tau mis-splicing caused by FTDP-17 MAPT mutations by spliceosome-mediated RNA trans-splicing

    OpenAIRE

    Rodriguez-Martin, Teresa; Anthony, Karen; Garcia-Blanco, Mariano A.; Mansfield, S. Gary; Anderton, Brian H.; Gallo, Jean-Marc

    2009-01-01

    Frontotemporal dementia with parkinsonism linked to chromosome 17 (FTDP-17) is caused by mutations in the MAPT gene, encoding the tau protein that accumulates in intraneuronal lesions in a number of neurodegenerative diseases. Several FTDP-17 mutations affect alternative splicing and result in excess exon 10 (E10) inclusion in tau mRNA. RNA reprogramming using spliceosome-mediated RNA trans-splicing (SMaRT) could be a method of choice to correct aberrant E10 splicing resulting from FTDP-17 mu...

  13. {bar K}-NUCLEAR Deeply Bound States?

    Science.gov (United States)

    Gal, Avraham

    Following the prediction by Akaishi and Yamazaki of relatively narrow {bar K}-nuclear states, deeply bound by over 100 MeV where the main decay channel {bar K} N -> π Σ is closed, several experimental signals in stopped K- reactions on light nuclei have been interpreted recently as due to such states. In this talk I review (i) the evidence from K--atom data for a deep bar K-nucleus potential, as attractive as V{bar K}(ρ 0) ˜ -(150 - 200) MeV at nuclear matter density, that could support such states; and (ii) the theoretical arguments for a shallow potential, V{bar K}(ρ 0) ˜ -(40 - 60) MeV. I then review a recent work by Mareš, Friedman and Gal in which {bar K}-nuclear bound states are generated dynamically across the periodic table, using a RMF Lagrangian that couples the {bar K} to the scalar and vector meson fields mediating the nuclear interactions. The reduced phase space available for {bar K} absorption from these bound states is taken into account by adding a density- and energy-dependent imaginary term, underlying the corresponding {bar K}-nuclear level widths, with a strength constrained by K--atom fits. Substantial polarization of the core nucleus is found for light nuclei, with central nuclear densities enhanced by almost a factor of two. The binding energies and widths calculated in this dynamical model differ appreciably from those calculated for a static nucleus. These calculations provide a lower limit of Γ {bar K} ˜ 50 ± 10 MeV on the width of nuclear bound states for {bar K} binding energy in the range B{bar K} = 100 - 200 MeV.

  14. Installation of Shimming Bars for CYCIAE-100

    Institute of Scientific and Technical Information of China (English)

    LV; Yin-long; WANG; Zhen-hui; ZHONG; Jun-qing; LIU; Geng-shou

    2012-01-01

    <正>The 100 MeV high intensity proton cyclotron, CYCIAE-100, is the most critical equipment of the BRIF project at CIAE. The shimming bars are used to get the isochronous magnetic field. In the process of magnetic mapping and shimming, the bars should be repeated the installed and disassembly for about 10 times. Each time the installation precision must be ensured. The bars installation schedule and quality are directly related to the BRIF project progress.

  15. Binding of a candidate splice regulator to a calcitonin-specific splice enhancer regulates calcitonin/CGRP pre-mRNA splicing.

    Science.gov (United States)

    Coleman, Timothy P; Tran, Quincy; Roesser, James R

    2003-01-27

    The calcitonin/calcitonin gene-related peptide (CGRP) pre-mRNA is alternatively processed in a tissue-specific manner leading to the production of calcitonin mRNA in thyroid C cells and CGRP mRNA in neurons. A candidate calcitonin/CGRP splice regulator (CSR) isolated from rat brain was shown to inhibit calcitonin-specific splicing in vitro. CSR specifically binds to two regions in the calcitonin-specific exon 4 RNA previously demonstrated to function as a bipartate exonic splice enhancer (ESE). The two regions, A and B element, are necessary for inclusion of exon 4 into calcitonin mRNA. A novel RNA footprinting method based on the UV cross-linking assay was used to define the site of interaction between CSR and B element RNA. Base changes at the CSR binding site prevented CSR binding to B element RNA and CSR was unable to inhibit in vitro splicing of pre-mRNAs containing the mutated CSR binding site. When expressed in cells that normally produce predominantly CGRP mRNA, a calcitonin/CGRP gene containing the mutated CSR binding site expressed predominantly calcitonin mRNA. These observations demonstrate that CSR binding to the calcitonin-specific ESE regulates calcitonin/CGRP pre-mRNA splicing.

  16. Designing oligo libraries taking alternative splicing into account

    Science.gov (United States)

    Shoshan, Avi; Grebinskiy, Vladimir; Magen, Avner; Scolnicov, Ariel; Fink, Eyal; Lehavi, David; Wasserman, Alon

    2001-06-01

    We have designed sequences for DNA microarrays and oligo libraries, taking alternative splicing into account. Alternative splicing is a common phenomenon, occurring in more than 25% of the human genes. In many cases, different splice variants have different functions, are expressed in different tissues or may indicate different stages of disease. When designing sequences for DNA microarrays or oligo libraries, it is very important to take into account the sequence information of all the mRNA transcripts. Therefore, when a gene has more than one transcript (as a result of alternative splicing, alternative promoter sites or alternative poly-adenylation sites), it is very important to take all of them into account in the design. We have used the LEADS transcriptome prediction system to cluster and assemble the human sequences in GenBank and design optimal oligonucleotides for all the human genes with a known mRNA sequence based on the LEADS predictions.

  17. Network of evolutionary processors with splicing rules and permitting context.

    Science.gov (United States)

    Choudhary, Ashish; Krithivasan, Kamala

    2007-02-01

    In this paper we consider networks of evolutionary processors with splicing rules and permitting context (NEPPS) as language generating and computational devices. Such a network consists of several processors placed on the nodes of a virtual graph and are able to perform splicing (which is a biologically motivated operation) on the words present in that node, according to the splicing rules present there. Before applying the splicing operation on words, we check for the presence of certain symbols (permitting context) in the strings on which the rule is applied. Each node is associated with an input and output filter. When the filters are based on random context conditions, one gets the computational power of Turing machines with networks of size two. We also show how these networks can be used to solve NP-complete problems in linear time. PMID:17045388

  18. Splicing Regulation: A Molecular Device to Enhance Cancer Cell Adaptation

    Directory of Open Access Journals (Sweden)

    Vittoria Pagliarini

    2015-01-01

    Full Text Available Alternative splicing (AS represents a major resource for eukaryotic cells to expand the coding potential of their genomes and to finely regulate gene expression in response to both intra- and extracellular cues. Cancer cells exploit the flexible nature of the mechanisms controlling AS in order to increase the functional diversity of their proteome. By altering the balance of splice isoforms encoded by human genes or by promoting the expression of aberrant oncogenic splice variants, cancer cells enhance their ability to adapt to the adverse growth conditions of the tumoral microenvironment. Herein, we will review the most relevant cancer-related splicing events and the underlying regulatory mechanisms allowing tumour cells to rapidly adapt to the harsh conditions they may face during the occurrence and development of cancer.

  19. Dynamical mechanisms supporting barred-spiral structures

    Science.gov (United States)

    Patsis, P. A.

    We review some recent results of the orbital theory, related with the dynamics of barred-spiral galaxies. The method we use is to study the responses of stellar and gaseous disks when time-independent, external potentials are imposed. These potentials are directly estimated from near-infrared images of disk galaxies. The goal of the work is to detect dynamical mechanisms that reinforce the bars and the spirals in realistic systems. Besides the known mechanism for building bars by quasiperiodic orbits trapped around stable orbits of the {xx} family, we find cases where bars can be supported, to a large extent, by chaotic orbits. These bars are of the ``ansae'' type and their effective potentials are characterized by multiple Lagrangian points roughly along the major axis of the bar. On the other hand the spirals are supported mainly by chaotic orbits and extend usually beyond corotation. We find that the spirals and the outer parts of the bars share the same orbital content. However, we have found also barred-spiral systems with spirals inside corotation, consisting mainly by chaotic orbits. Finally we indicate, that in barred-spiral systems with different pattern speeds for the two components, the dynamics of the spirals can be similar to the dynamics of the spirals of normal spiral galaxies.

  20. Chiral Perturbation Theory and the $\\bar B \\bar B$ Strong Interaction

    CERN Document Server

    Liu, Zhan-Wei; Zhu, Shi-Lin

    2012-01-01

    We have calculated the potentials of the heavy (charmed or bottomed) pseudoscalar mesons up to $O(\\epsilon^2)$ with the heavy meson chiral perturbation theory. We take into account the contributions from the football, triangle, box, and crossed diagrams with the 2$\\phi$ exchange and one-loop corrections to the contact terms. We notice that the total 2$\\phi$-exchange potential alone is attractive in the small momentum region in the channel ${\\bar B \\bar B}^{I=1}$, ${\\bar B_s \\bar B_s}^{I=0}$, or ${\\bar B \\bar B_s}^{I=1/2}$, while repulsive in the channel ${\\bar B \\bar B}^{I=0}$. Hopefully the analytical chiral structures of the potentials may be useful in the extrapolation of the heavy meson interaction from lattice QCD simulation.

  1. Alternative Splicing of Type II Procollagen: IIB or not IIB?

    OpenAIRE

    McAlinden, Audrey

    2014-01-01

    Over two decades ago, two isoforms of the type II procollagen gene (COL2A1) were discovered. These isoforms, named IIA and IIB, are generated in a developmentally-regulated manner by alternative splicing of exon 2. Chondroprogenitor cells synthesize predominantly IIA isoforms (containing exon 2) while differentiated chondrocytes produce mainly IIB transcripts (devoid of exon 2). Importantly, this IIA-to-IIB alternative splicing switch occurs only during chondrogenesis. More recently, two othe...

  2. RBM20, a gene for hereditary cardiomyopathy, regulates titin splicing

    OpenAIRE

    Guo, Wei; Schafer, Sebastian; Greaser, Marion L.; Radke, Michael H.; Liss, Martin; Govindarajan, Thirupugal; Maatz, Henrike; Schulz, Herbert; Li, Shijun; Parrish, Amanda M.; Dauksaite, Vita; Vakeel, Padmanabhan; Klaassen, Sabine; Gerull, Brenda; Thierfelder, Ludwig

    2012-01-01

    Alternative splicing plays a major role in the adaptation of cardiac function exemplified by the isoform switch of titin, which adjusts ventricular filling. We previously identified a rat strain deficient in titin splicing. Using genetic mapping, we found a loss-of-function mutation in RBM20 as the underlying cause for the pathological titin isoform expression. Mutations in human RBM20 have previously been shown to cause dilated cardiomyopathy. We showed that the phenotype of Rbm20 deficient ...

  3. Interrogation of alternative splicing events in duplicated genes during evolution

    OpenAIRE

    Chen Ting-Wen; Wu Timothy H; Ng Wailap V; Lin Wen-Chang

    2011-01-01

    Abstract Background Gene duplication provides resources for developing novel genes and new functions while retaining the original functions. In addition, alternative splicing could increase the complexity of expression at the transcriptome and proteome level without increasing the number of gene copy in the genome. Duplication and alternative splicing are thought to work together to provide the diverse functions or expression patterns for eukaryotes. Previously, it was believed that duplicati...

  4. StarBus+: Distributed Object Middleware Practice for Internet Computing

    Institute of Scientific and Technical Information of China (English)

    Huai-Min Wang; Yu-Feng Wang; Yang-Bin Tang

    2005-01-01

    In the past decade, the booming of Internet challenges the middleware in three aspects: quality of service,balance of changes and stabilization, and across-Internet integration. This paper presents our work on distributed object computing middleware technology for these challenges, as well as the research and development on StarBus+, which is a CORBA standard-compliant middleware suite with the features such as object request broker supporting multi-* quality of service, component model, and integration with Web Service. This paper comprehensively presents the design and characteristics of StarBns+, and demonstrates how StarBus+ is enhanced to address the challenges of Internet computing through three case studies: inter-enterprise integration over Internet, application evolution through dynamic reconfiguration,and great massive information system building. The paper also suggests some research directions which are important for Internet computing.

  5. Bus Encoder for Crosstalk Avoidance in RLC Modeled Interconnects

    Directory of Open Access Journals (Sweden)

    G. Nagendra Babu

    2012-02-01

    Full Text Available Most of the encoding methods proposed in recent years have dealt with only RC modeled VLSI interconnects. For deep sub micron technologies (DSM, on-chip inductive effects have increased due to faster clock speeds, smaller signal rise times and longer length of on-chip interconnects. All these issues raise the concern for cross talk, propagation delay and power dissipation of overall. Therefore, this research work introduces an efficient Bus Encoder using Bus Inverting (BI method. The proposed design dramatically reduces both cross talk and power dissipation in RLC modeled interconnects which makes it suitable for current high-speed low-power VLSI interconnects. The proposed model demonstrates an overall reduction of power dissipation and cross talk induced delay by 55.43% and 45.87%, respectively.

  6. Bus Vent Design Evolution for the Solar Dynamics Observatory

    Science.gov (United States)

    Woronowicz, Michael

    2010-01-01

    As a spacecraft undergoes ascent in a launch vehicle, its pressure environment transitions from one atmosphere to high vacuum in a matter of minutes. Venting of internal cavities is necessary to prevent the buildup of pressure differentials across cavity walls. Opposing the need to vent these volumes freely into space are thermal, optical, and electrostatic requirements for limiting or prohibiting the intrusion of unwanted energy into the same cavities. Bus vent design evolution is discussed for the Solar Dynamics Observatory. Design changes were influenced by a number of factors and concerns, such as contamination control, electrostatic discharge, changes in bus material, and driving fairing ascent pressure for a launch vehicle that was just entering service as this satellite project had gotten underway.

  7. Implementation of I 2C Master Bus Protocol on FPGA

    Directory of Open Access Journals (Sweden)

    Regu Archana

    2014-10-01

    Full Text Available The focus of this paper is on I 2C (Inter-Integrated Circuit protocol interface between Master Bus protocol and slave. Here we are interfacing between micro-controller and DS1307. I 2C bus protocol sends 8 bit data from micro-controller to DS1307. This module was designed in VHDL and simulated and synthesized using Xilinx ISE Design Suite 14.2. I 2C and optimized for area and power. This concept is widely applicable from any high speed device or low speed device to any low speed device or high speed device. This module acts as a slave for the DS1307 at the same time acts like a master for the micro-controller device which can be considered as a slave. . It can be used to interface low speed peripherals like motherboard, embedded system, mobile phones, set top boxes, DVD, PDA’s or other electronic devices.

  8. Hardware Engines for Bus Encryption: A Survey of Existing Techniques

    CERN Document Server

    Elbaz, R; Sassatelli, G; Guillemin, P; Anguille, C; Bardouillet, M; Buatois, C; Rigaud, J B

    2011-01-01

    The widening spectrum of applications and services provided by portable and embedded devices bring a new dimension of concerns in security. Most of those embedded systems (pay-TV, PDAs, mobile phones, etc...) make use of external memory. As a result, the main problem is that data and instructions are constantly exchanged between memory (RAM) and CPU in clear form on the bus. This memory may contain confidential data like commercial software or private contents, which either the end-user or the content provider is willing to protect. The goal of this paper is to clearly describe the problem of processor-memory bus communications in this regard and the existing techniques applied to secure the communication channel through encryption - Performance overheads implied by those solutions will be extensively discussed in this paper.

  9. Environmental assessment of 9 European public bus transportation systems

    DEFF Research Database (Denmark)

    Nanaki, Eva; Koroneos, Christophis; Roset, Jaume;

    2017-01-01

    that affect the production of carbon dioxide (CO2) as well as of air pollutants, in 9 major European cities, aiming to provide a comprehensive overview of the actual knowledge on the atmospheric pollution from public transportation systems. CO2 emissions as well as air pollutants, such as CO, HC, PM, NOx......The transportation sector is one of the largest sources of EU’s greenhouse gas emissions. In 2011, transportation represented approximately 25 percent of total EU’s greenhouse gas emissions. Urban mobility accounts for 40% of all CO2 emissions of road transport and up to 70% of other pollutants...... are calculated for the diesel and CNG bus fleets of the European cities under study. Finally the environmental benefits, in terms of CO2 and CO, HC, PM, NOx emissions reductions, from the penetration of different biodiesel blends (from B10 to B100) to the bus fleets are estimated....

  10. Health effect of a bus ride in an urban environment

    Energy Technology Data Exchange (ETDEWEB)

    Takano, T.

    1983-07-01

    Health effects on subjects during a bus drive on an urban road were investigated in a real situation. Leukocyte count, adrenalin level in blood and urine, noradrenalin and dopamine in urine, diastolic blood pressure, and index of vascular resistance increased significantly on the drive day compared with the control day. A bus drive on an urban road induced enhanced sympathetic-adreno-medullary activity in real life as a result of the comprehensive effect of various factors. The concentrations of air pollutants were excessively high on the road, and correlated with traffic volume. It was concluded that the interactions between psychogenic, physical nonspecific and physical specific effects should be taken into consideration when evaluating human health effects of air pollution in the urban environment.

  11. THE DESIGN OF VMEBUS BRIDGE CONTROLLER WITH SHARC BUS

    Institute of Scientific and Technical Information of China (English)

    Wang Min; Wu Shunjun; Su Tao

    2005-01-01

    Targeting at the high expense and inflexibility to realize VMEbus bridge controller by professional Integrated Circuit (IC), this paper presents a scheme of adopting CPLD/FPGA (Complicated Programmable Logic Device/Field Programmable Gate Array) to design bridge controller between VMEbus and local bus. SHARC DSP (Digital Signal Processor) bus is an example. It has functions of nearly entire master/slave interface of VMEbus, and can act as DMA (Direct Memory Access) controller and perform block transfer in DMA or master processor initiative way without length limit. External circuit of the design is very simple. In comparison with special ICs, it has high performance to price ratio and can be easily applied to local buses of other processors with quite a little modification.

  12. Technology Update of a Control System Trough Corba Bus

    CERN Document Server

    Bertocchi, A; Buceti, G; Centioli, C; Muzio, D D; Iannone, F; Mazza, G; Panella, M; Vitale, V

    2001-01-01

    After more than 10 years of activity, FTU (Frascati Tokamak Upgrade) has to face the problem of taking advantage of the new hardware and software technology saving all the investments yet done. So, for example, the 20 years old Westinghouse PLCs (communicating only through a serial line) have to be leaved in operation while a web-based tool has to be released for plan monitoring purpose. CORBA bus has been demonstrated to be the answer to set up the communication between old and new hardware and software blocks. On FTU the control system is based on Basestar, a Digital/Compaq software suite. We will describe how the real time database of Basestar is now accessed by Java graphic tools, LabView and, in principle, any package accepting external routines. An account will be also done in the data acquisition area where a Camac serial highway driver has been integrated in the new architecture still through the CORBA bus

  13. Heat storage for a bus petrol internal-combustion engine

    Science.gov (United States)

    Vasiliev, Leonard L.; Burak, Victor S.; Kulakov, Andry G.; Mishkinis, Donatas A.; Bohan, Pavel V.

    The heat storage (HS) system for pre-heating a bus petrol internal combustion engine to starting was mathematically modelled and experimentally investigated. The development of such devices is an extremely urgent problem especially for regions with a cold climate. We discuss how HS works on the effect of absorption and rejection of heat energy at a solid-liquid phase change of a HS substance. In the first part of the paper a numerical method to calculate the HS mass-dimensional parameters and their characteristics are described. In the experimental part of the paper results are given of experiments on the pre-heating device aiding to start a carburettor engine under operational conditions and analysis of data received. Practical confirmation of the theoretical development of HS devices for a bus engine for starting by pre-heating is given.

  14. Investigation on full distribution CNC system based on SERCOS bus

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    A full distribution CNC system based on SERCOS bus is studied in accordance with the limitations of traditional PC-based motion card.The conventional PC-based motion control card is dispersed into several autonomous intelligent servo-control units with the function of servo driver.The autonomous intelligent servocontrol units realize the loop control of position,velocity and current.Interpolation computation is completed in PC and the computational results are transferred to every autonomous intelligent servo-control unit by high speed SERCOS bus.Software or hardware synchronization technology is used to ensure all servomotors are successive and synchronously running.The communication and synchronization technology of SERCOS are also researched and the autonomous intelligent servo-control card is developed byself.Finally,the experiment of circle contour process on a prototype system proves the feasibility.

  15. The functional modulation of epigenetic regulators by alternative splicing

    Directory of Open Access Journals (Sweden)

    Martínez-Balbás Marian

    2007-07-01

    Full Text Available Abstract Background Epigenetic regulators (histone acetyltransferases, methyltransferases, chromatin-remodelling enzymes, etc play a fundamental role in the control of gene expression by modifying the local state of chromatin. However, due to their recent discovery, little is yet known about their own regulation. This paper addresses this point, focusing on alternative splicing regulation, a mechanism already known to play an important role in other protein families, e.g. transcription factors, membrane receptors, etc. Results To this end, we compiled the data available on the presence/absence of alternative splicing for a set of 160 different epigenetic regulators, taking advantage of the relatively large amount of unexplored data on alternative splicing available in public databases. We found that 49 % (70 % in human of these genes express more than one transcript. We then studied their alternative splicing patterns, focusing on those changes affecting the enzyme's domain composition. In general, we found that these sequence changes correspond to different mechanisms, either repressing the enzyme's function (e.g. by creating dominant-negative inhibitors of the functional isoform or creating isoforms with new functions. Conclusion We conclude that alternative splicing of epigenetic regulators can be an important tool for the function modulation of these enzymes. Considering that the latter control the transcriptional state of large sets of genes, we propose that epigenetic regulation of gene expression is itself strongly regulated by alternative splicing.

  16. Desmin splice variants causing cardiac and skeletal myopathy.

    Science.gov (United States)

    Park, K Y; Dalakas, M C; Goebel, H H; Ferrans, V J; Semino-Mora, C; Litvak, S; Takeda, K; Goldfarb, L G

    2000-11-01

    Desmin myopathy is a hereditary or sporadic cardiac and skeletal myopathy characterised by intracytoplasmic accumulation of desmin reactive deposits in muscle cells. We have characterised novel splice site mutations in the gene desmin resulting in deletion of the entire exon 3 during the pre-mRNA splicing. Sequencing of cDNA and genomic DNA identified a heterozygous de novo A to G change at the +3 position of the splice donor site of intron 3 (IVS3+3A-->G) in a patient with sporadic skeletal and cardiac myopathy. A G to A transition at the highly conserved -1 nucleotide position of intron 2 affecting the splice acceptor site (IVS2-1G-->A) was found in an unrelated patient with a similar phenotype. Expression of genomic DNA fragments carrying the IVS3+3A-->G and IVS2-1G-->A mutations confirmed that these mutations cause exon 3 deletion. Aberrant splicing leads to an in frame deletion of 32 complete codons and is predicted to result in mutant desmin lacking 32 amino acids from the 1B segment of the alpha helical rod. Functional analysis of the mutant desmin in SW13 (vim-) cells showed aggregation of abnormal coarse clumps of desmin positive material dispersed throughout the cytoplasm. This is the first report on the pathogenic potentials of splice site mutations in the desmin gene.

  17. Abnormalities in Alternative Splicing of Apoptotic Genes and Cardiovascular Diseases

    Directory of Open Access Journals (Sweden)

    Zodwa Dlamini

    2015-11-01

    Full Text Available Apoptosis is required for normal heart development in the embryo, but has also been shown to be an important factor in the occurrence of heart disease. Alternative splicing of apoptotic genes is currently emerging as a diagnostic and therapeutic target for heart disease. This review addresses the involvement of abnormalities in alternative splicing of apoptotic genes in cardiac disorders including cardiomyopathy, myocardial ischemia and heart failure. Many pro-apoptotic members of the Bcl-2 family have alternatively spliced isoforms that lack important active domains. These isoforms can play a negative regulatory role by binding to and inhibiting the pro-apoptotic forms. Alternative splicing is observed to be increased in various cardiovascular diseases with the level of alternate transcripts increasing elevated in diseased hearts compared to healthy subjects. In many cases these isoforms appear to be the underlying cause of the disease, while in others they may be induced in response to cardiovascular pathologies. Regardless of this, the detection of alternate splicing events in the heart can serve as useful diagnostic or prognostic tools, while those splicing events that seem to play a causative role in cardiovascular disease make attractive future drug targets.

  18. Width of gene expression profile drives alternative splicing.

    Directory of Open Access Journals (Sweden)

    Daniel Wegmann

    Full Text Available Alternative splicing generates an enormous amount of functional and proteomic diversity in metazoan organisms. This process is probably central to the macromolecular and cellular complexity of higher eukaryotes. While most studies have focused on the molecular mechanism triggering and controlling alternative splicing, as well as on its incidence in different species, its maintenance and evolution within populations has been little investigated. Here, we propose to address these questions by comparing the structural characteristics as well as the functional and transcriptional profiles of genes with monomorphic or polymorphic splicing, referred to as MS and PS genes, respectively. We find that MS and PS genes differ particularly in the number of tissues and cell types where they are expressed.We find a striking deficit of PS genes on the sex chromosomes, particularly on the Y chromosome where it is shown not to be due to the observed lower breadth of expression of genes on that chromosome. The development of a simple model of evolution of cis-regulated alternative splicing leads to predictions in agreement with these observations. It further predicts the conditions for the emergence and the maintenance of cis-regulated alternative splicing, which are both favored by the tissue specific expression of splicing variants. We finally propose that the width of the gene expression profile is an essential factor for the acquisition of new transcript isoforms that could later be maintained by a new form of balancing selection.

  19. An Optimization Model for the Selection of Bus-Only Lanes in a City.

    Directory of Open Access Journals (Sweden)

    Qun Chen

    Full Text Available The planning of urban bus-only lane networks is an important measure to improve bus service and bus priority. To determine the effective arrangement of bus-only lanes, a bi-level programming model for urban bus lane layout is developed in this study that considers accessibility and budget constraints. The goal of the upper-level model is to minimize the total travel time, and the lower-level model is a capacity-constrained traffic assignment model that describes the passenger flow assignment on bus lines, in which the priority sequence of the transfer times is reflected in the passengers' route-choice behaviors. Using the proposed bi-level programming model, optimal bus lines are selected from a set of candidate bus lines; thus, the corresponding bus lane network on which the selected bus lines run is determined. The solution method using a genetic algorithm in the bi-level programming model is developed, and two numerical examples are investigated to demonstrate the efficacy of the proposed model.

  20. Capacity models on expressway near a bus bay stop with an access

    Institute of Scientific and Technical Information of China (English)

    张洪宾; 孙小端; 贺玉龙; 宇仁德

    2015-01-01

    To determinate the expressway capacity near a bus bay stop with an access, capacity models on the expressway near a bus stop with an access were developed on the basis of gap acceptance theory and queuing theory. Depending on a bus stop position to an entrance or an exit ramp, the capacity models were developed for four cases. Bus bay stops with overflow and bus bay stops without overflow were considered. A comparison of simulation experiment and model calculation was carried out. Results show that the suggested models have high accuracy and reliability, at bus arrival rate below 60 vehicles per hour (veh/h) or vehicle volumes at the entrance and the exit below 200 passenger cars units per hour (pcu/h), and there are no significant difference in the capacities for four cases. When bus arrival rate is above 240 veh/h, the capacities of all four cases will decline rapidly. With berth number increasing, the increasing of the capacities is no obvious for four cases. As the bus arrival rate and vehicle volumes at the entrance and the exit increase, bus stops located downstream of an entrance and upstream of an exit have a remarkably effect on the capacities. The latter case is much heavier than the former. Those results can be used to traffic design and optimization on urban expressway near a bus stop with an access.

  1. Common Traffic Violations of Bus Drivers in Urban China: An Observational Study.

    Directory of Open Access Journals (Sweden)

    Qiqi Wang

    Full Text Available To report common traffic violations in bus drivers and the factors that influence those violations in urban China.We conducted an observational study to record three types of traffic violations among bus drivers in Changsha City, China: illegal stopping at bus stations, violating traffic light signals, and distracted driving. The behaviors of bus drivers on 32 routes (20% of bus routes in the city were observed. A two-level Poisson regression examined factors that predicted bus driver violations.The incidence of illegal stopping at bus stations was 20.2%. Illegal stopping was less frequent on weekends, sunny days, and at stations with cameras, with adjusted incidence rate ratios (IRRs of 0.81, 0.65 and 0.89, respectively. The incidence of violating traffic light signals was 2.2%, and was lower on cloudy than sunny days (adjusted IRR: 0.60. The incidence of distracted driving was 3.3%. The incidence of distracted driving was less common on cloudy days, rainy or snowy days, and foggy/windy/dusty days compared to sunny days, with adjusted IRRs of 0.54, 0.55 and 0.07, respectively.Traffic violations are common in bus drivers in urban China and they are associated with the date, weather, and presence of traffic cameras at bus station. Further studies are recommended to understand the behavioral mechanisms that may explain bus driver violations and to develop feasible prevention measures.

  2. BUS BAY PERFORMANCE AND ITS INFLUENCE ON THE CAPACITY OF ROAD NETWORK IN DAR ES SALAAM

    Directory of Open Access Journals (Sweden)

    Nurdin K. Mushule

    2012-01-01

    Full Text Available One of major problems facing motorists in Dar es Salaam city today is congestion. Bus bays have a significant influence on the capacity of a roadway because they interfere with passing vehicles primarily when buses maneuver to pull into and out of bus bays. Bus bay stops will also interfere with vehicles movement if bus demand exceeds the bus bay capacity resulting in some buses waiting in the travel lane until the buses occupying the bay exit the bay. This paper presents the results of a study which was carried out to evaluate the bus bay performance and its influence on the capacity of the roadway network in the city of Dar es Salaam. The case study area covered 11 bus stops along Morogoro road from Ubungo to Magomeni Mapipa. Capacity of bus bays was studied using procedure outlined in the Transit Capacity and Quality of Service Manual of 2003. This enabled the researcher to determine parameters such as dwell times and clearance times which are major determinants of bus stop capacity. The results indicate that only 18% of the bus bay stops studied did not have adequate capacity to cater for the available demand. 9% did not have adequate capacity during peak hours but the capacity was adequate during off-peak hours. The remaining 73% of bus bay stops possess adequate capacity all the time. Although most bus bay stops studied possess adequate capacity, severe congestion was observed at these locations. This is due to erratic behavior of bus drivers who do not utilize the provided space for them to drop off and pick up passengers. Clearly, this is an area that requires more strict enforcement in order to ease the congestion problem in the city by operating the existing capacity more efficiently."

  3. City of Chula Vista hydrogen fuel cell bus demonstration project

    Energy Technology Data Exchange (ETDEWEB)

    Gustafson, B.; Bamberger, B.

    1996-10-01

    Hydrogen as an energy carrier and fuel has potential for various uses including electricity, commercial, residential, transportation, and industrial. It is an energy carrier that can be produced from a variety of primary sources and potentially can accomplish these various uses while significantly reducing pollution by substituting for or reducing the use of fossil fuels. One of the most immediate and potentially viable roles for hydrogen as an energy carrier will be its use as a transportation fuel, especially in densely populated urban areas where automotive emissions contribute significantly to air pollution. The Department of Energy`s commitment to research and development of hydrogen as an alternative fuel, and California`s Zero Emission Vehicle (ZEV) requirements, both provide the impetus and favorable circumstance for demonstrating hydrogen as a transportation fuel on an urban bus system. The purpose of this project is to demonstrate the feasibility of using solid polymer fuel cells in a hydrogen-powered electric drive system for an urban transit bus application. Fuel cell buses use hydrogen fuel and oxygen from the air to produce electrical power with the only byproduct being pure water. Proton Exchange Membrane (PEM) fuel cells are proposed for this project. Current evidence suggests that fuel cells, which rely on hydrogen and a process known as proton exchange to generate their power, appear to have an infinite life span. All exhaust pollution is completely eliminated, resulting in a Zero Emission Vehicle (ZEV). An urban bus system offers the potential for developing a market for the production of hydrogen propulsion technology due to extensive vehicular use in densely populated areas experiencing pollution from numerous sources, and because the central garaging facilities or the bus system facilitates fueling and maintenance functions.

  4. System investigation H2 bus fleet (technology, regulations, future development)

    International Nuclear Information System (INIS)

    In cooperation with Ansaldo Ricerche, ICIL have compiled a technical catalogue, providing the impartial descriptions, both of existing technology and regulations, and the likely future developments of these, as to remedy the first problem faced by a potential hydrogen bus fleet operator viz the absence of an impartial description of the available vehicle and fuels systems together with the absence of a description of regulatory and safety factors which need consideration. (orig.)

  5. Market brief : the alternative fuels bus market in India

    International Nuclear Information System (INIS)

    In 2003, alternative fuel bus technologies in India were valued at approximately $1.5 billion. There are an estimated 600,000 buses in India, of which 21 per cent are owned by public transit. Bus production is currently 33,000 per year and increasing at 4 per cent annually. The main alternative fuel bus technologies include fuel cells, compressed natural gas (CNG) and liquefied petroleum gas (LPG). Since urban centres in India are among the most polluted in the world, demand for these technologies is strong. India is ranked fifth in the world in terms of vehicles converted to natural gas. In 2003, New Delhi switched from diesel to CNG fuel for buses but has faced challenges because there is no well-developed underground distribution system and refilling times are long due to weak pressure at fueling stations. India's new $28 million fuel cell bus development project aims to place 8 fuel cell powered buses with the Delhi Transport Corporation. This market brief describes the potential for Canadian suppliers to enter into joint ventures to establish local production facilities and transfer technology expertise. It describes the key factors shaping market growth with particular reference to sector reform, and opportunities with actual and planned projects. The competitive environment was also discussed with reference to local capabilities, international competition, Canadian position, and a competitive advantage through Canadian government policies and initiatives. A section of the report on public-sector customers listed the companies that buy alternative fuel buses in India. Considerations for market-entry in India were also outlined

  6. Modelling urban bus transport emissions in Santiago de Cuba

    OpenAIRE

    Warren, James; Avila, Jordi Mirabent

    2010-01-01

    This study described and focuses on the public transport bus system in Santiago de Cuba. Specifically we explore the fuel consumption of the various diesel buses over a three year period from 2007 to 2009 and with a forecast for the forthcoming years. The study considers the potential for fuel savings through a variety of methods which are each described and then modelled. Pollution is also calculated for a variety of scenarios and some suggestions are made in order to lower the overall...

  7. Virtual Instrument Based on GPIB Interface Bus1

    Institute of Scientific and Technical Information of China (English)

    Xiao,Ying; Qi,Hanhong

    2004-01-01

    In this paper, we introduced the technique of GPIB businterface. Through the controlling of the GPIB interface board,the computer controlled the current source and the voltmeter, both of which have GPIB bus interface, and a virtual instrument testing system for I~V curve was composed. The virtual instrument front panel and the background graphical control program in Labview environment accomplish virtual instrument testing task along with the hardware system.

  8. Damping torque analysis for DC bus implemented damping control

    OpenAIRE

    W. Du; WANG, HAIFENG; Ju, P.; Dunn, R

    2010-01-01

    Damping torque analysis is a well-developed technique for understanding and studying power system oscillations. This paper presents the applications of damping torque analysis for DC bus implemented damping control in power transmission networks in two examples. The first example is the investigation of damping effect of shunt VSC (Voltage Source Converter) based FACTS voltage control, i.e., STATCOM (Static Synchronous Compensator) voltage control. It is shown in the paper that STATCOM voltag...

  9. An asynchronous controller for a daisychainable vme bus interrupter

    OpenAIRE

    Wollowski, Ralf; Beister, Jochen; Kuhn, Matthias

    1999-01-01

    An interrupter for use in a daisy-chained VME bus interrupt system has beendesigned and implemented as an asynchronous sequential circuit. The concur-rency of the processes posed a design problem that was solved by means of asystematic design procedure that uses Petri nets for specifying system and in-terrupter behaviour, and for deriving a primitive flow table. Classical designand additional measures to cope with non-fundamental mode operation yieldeda coded state-machine representation. Thi...

  10. An Electric Bus with a Battery Exchange System

    OpenAIRE

    Jeongyong Kim; Inho Song; Woongchul Choi

    2015-01-01

    As part of the ongoing effort to be independent of petroleum resources and to be free from pollutant emission issues, various electric vehicles have been developed and tested through their integration with real world systems. In the current paper, yet another application specific EV for public transportation, an electric bus, is introduced and explained with results from the pilot test program which was carried out under real traffic conditions. The main feature of the current system is a bat...

  11. FAKTOR PENYEBAB KERUSAKAN SISTEM MESIN PADA BUS APTB PPD

    OpenAIRE

    Laela Chairani; Yulita Veranda Usman; Nur Yulianti Hidayah

    2015-01-01

    Comfort and safety of public transportation, particularly APTB PPD buses, becomes high expectations for its customers. Those expectations must be supported by the application of a good engine maintenance system. By using the method of Reliability Centered Maintenance may be determined appropriate actions to mitigate damage. From the analysis known the failures of the APTB PPD bus are malfunctions of the fuel engine, power transfer systems, difficulty to move the gear lever, and lubricating sy...

  12. BC Transit Fuel Cell Bus Project: Evaluation Results Report

    Energy Technology Data Exchange (ETDEWEB)

    Eudy, L.; Post, M.

    2014-02-01

    This report evaluates a fuel cell electric bus demonstration led by British Columbia Transit (BC Transit) in Whistler, Canada. BC Transit is collaborating with the California Air Resources Board and the U.S. Department of Energy's National Renewable Energy Laboratory to evaluate the buses in revenue service. This evaluation report covers two years of revenue service data on the buses from April 2011 through March 2013.

  13. A study of B0bar --> D(*)0 K(*)bar decays

    CERN Document Server

    Aubert, B; Boutigny, D; Couderc, F; Gaillard, J M; Hicheur, A; Karyotakis, Yu; Lees, J P; Tisserand, V; Zghiche, A; Palano, A; Pompili, A; Chen, J C; Qi, N D; Rong, G; Wang, P; Zhu, Y S; Eigen, G; Ofte, I; Stugu, B; Abrams, G S; Borgland, A W; Breon, A B; Brown, D N; Button-Shafer, J; Cahn, R N; Charles, E; Day, C T; Gill, M S; Gritsan, A V; Groysman, Y; Jacobsen, R G; Kadel, R W; Kadyk, J; Kerth, L T; Kolomensky, Yu G; Kukartsev, G; Lynch, G; Mir, L M; Oddone, P J; Orimoto, T J; Pripstein, M; Roe, N A; Ronan, Michael T; Shelkov, V G; Wenzel, W A; Barrett, M; Ford, K E; Harrison, T J; Hart, A J; Hawkes, C M; Morgan, S E; Watson, A T; Fritsch, M; Goetzen, K; Held, T; Koch, H; Lewandowski, B; Pelizaeus, M; Steinke, M; Boyd, J T; Chevalier, N; Cottingham, W N; Kelly, M P; Latham, T E; Wilson, F F; Çuhadar-Dönszelmann, T; Hearty, C; Knecht, N S; Mattison, T S; McKenna, J A; Thiessen, D; Khan, A; Kyberd, P; Teodorescu, L; Blinov, A E; Blinov, V E; Druzhinin, V P; Golubev, V B; Ivanchenko, V N; Kravchenko, E A; Onuchin, A P; Serednyakov, S I; Skovpen, Yu I; Solodov, E P; Yushkov, A N; Best, D; Bruinsma, M; Chao, M; Eschrich, I; Kirkby, D; Lankford, A J; Mandelkern, M A; Mommsen, R K; Röthel, W; Stoker, D P; Buchanan, C; Hartfiel, B L; Foulkes, S D; Gary, J W; Shen, B C; Wang, K; Del Re, D; Hadavand, H K; Hill, E J; MacFarlane, D B; Paar, H P; Rahatlou, S; Sharma, V; Berryhill, J W; Campagnari, C; Dahmes, B; Long, O; Lu, A; Mazur, M A; Richman, J D; Verkerke, W; Beck, T W; Eisner, A M; Heusch, C A; Kroseberg, J; Lockman, W S; Nesom, G; Schalk, T; Schumm, B A; Seiden, A; Spradlin, P; Williams, D C; Wilson, M G; Albert, J; Chen, E; Dubois-Felsmann, G P; Dvoretskii, A; Hitlin, D G; Narsky, I; Piatenko, T; Porter, F C; Ryd, A; Samuel, A; Yang, S; Jayatilleke, S M; Mancinelli, G; Meadows, B T; Sokoloff, M D; Abe, T; Blanc, F; Bloom, P; Chen, S; Ford, W T; Nauenberg, U; Olivas, A; Rankin, P; Smith, J G; Zhang, J; Zhang, L; Chen, A; Harton, J L; Soffer, A; Toki, W H; Wilson, R J; Zeng, Q; Altenburg, D; Brandt, T; Brose, J; Dickopp, M; Feltresi, E; Hauke, A; Lacker, H M; Müller-Pfefferkorn, R; Nogowski, R; Otto, S; Petzold, A; Schubert, J; Schubert, Klaus R; Schwierz, R; Spaan, B; Sundermann, J E; Bernard, D; Bonneaud, G R; Brochard, F; Grenier, P; Schrenk, S; Thiebaux, C; Vasileiadis, G; Verderi, M; Bard, D J; Clark, P J; Lavin, D; Muheim, F; Playfer, S; Xie, Y; Andreotti, M; Azzolini, V; Bettoni, D; Bozzi, C; Calabrese, R; Cibinetto, G; Luppi, E; Negrini, M; Piemontese, L; Sarti, A; Treadwell, E; Anulli, F; Baldini-Ferroli, R; Calcaterra, A; De Sangro, R; Finocchiaro, G; Patteri, P; Peruzzi, I M; Piccolo, M; Zallo, A; Buzzo, A; Capra, R; Contri, R; Crosetti, G; Lo Vetere, M; Macri, M; Monge, M R; Passaggio, S; Patrignani, C; Robutti, E; Santroni, A; Tosi, S; Bailey, S; Brandenburg, G; Chaisanguanthum, K S; Morii, M; Won, E; Dubitzky, R S; Langenegger, U; Bhimji, W; Bowerman, D A; Dauncey, P D; Egede, U; Gaillard, J R; Morton, G W; Nash, J A; Nikolich, M B; Taylor, G P; Charles, M J; Grenier, G J; Mallik, U; Cochran, J; Crawley, H B; Lamsa, J; Meyer, W T; Prell, S; Rosenberg, E I; Rubin, A E; Yi, J; Biasini, M; Covarelli, R; Pioppi, M; Davier, M; Giroux, X; Grosdidier, G; Höcker, A; Laplace, S; Le Diberder, F R; Lepeltier, V; Lutz, A M; Petersen, T C; Plaszczynski, S; Schune, M H; Tantot, L; Wormser, G; Cheng, C H; Lange, D J; Simani, M C; Wright, D M; Bevan, A J; Chavez, C A; Coleman, J P; Forster, I J; Fry, J R; Gabathuler, Erwin; Gamet, R; Hutchcroft, D E; Parry, R J; Payne, D J; Sloane, R J; Touramanis, C; Back, J J; Harrison, P F; Mohanty, G B; Cowan, G; Flack, R L; Flächer, H U; Green, M G; Jackson, P S; McMahon, T R; Ricciardi, S; Salvatore, F; Winter, M A; Brown, D; Davis, C L; Allison, J; Barlow, N R; Barlow, R J; Hart, P A; Hodgkinson, M C; Lafferty, G D; Lyon, A J; Williams, J C; Farbin, A; Hulsbergen, W D; Jawahery, A; Kovalskyi, D; Lae, C K; Lillard, V; Roberts, D A; Blaylock, G; Dallapiccola, C; Flood, K T; Hertzbach, S S; Kofler, R; Koptchev, V B; Moore, T B; Saremi, S; Stängle, H; Willocq, S; Cowan, R; Sciolla, G; Sekula, S J; Taylor, F; Yamamoto, R K; Mangeol, D J J; Patel, P M; Robertson, S H; Lazzaro, A; Lombardo, V; Palombo, F; Bauer, J M; Cremaldi, L M; Eschenburg, V; Godang, R; Kroeger, R; Reidy, J; Sanders, D A; Summers, D J; Zhao, H W; Brunet, S; Côté, D; Taras, P; Nicholson, H; Cavallo, N; Lista, L; Monorchio, D; Paolucci, P; Piccolo, D; Sciacca, C; Baak, M; Bulten, H; Raven, G; Snoek, H L; Wilden, L; Jessop, C P; LoSecco, J M; Allmendinger, T; Gan, K K; Honscheid, K; Hufnagel, D; Kagan, H; Kass, R; Pulliam, T; Rahimi, A M; Ter-Antonian, R; Wong, Q K; Brau, J E; Frey, R; Igonkina, O; Potter, C T; Sinev, N B; Strom, D; Torrence, E; Colecchia, F; Dorigo, A; Galeazzi, F; Margoni, M; Morandin, M; Posocco, M; Rotondo, M; Simonetto, F; Stroili, R; Tiozzo, G; Voci, C; Benayoun, M; Briand, H; Chauveau, J; David, P; La Vaissière, C de; Del Buono, L; Hamon, O; John, M J J; Leruste, P; Malcles, J; Ocariz, J; Pivk, M; Roos, L; T'Jampens, S; Therin, G; Manfredi, P F; Re, V; Behera, P K; Gladney, L; Guo, Q H; Panetta, J; Angelini, C; Batignani, G; Bettarini, S; Bondioli, M; Bucci, F; Calderini, G; Carpinelli, M; Forti, F; Giorgi, M A; Lusiani, A; Marchiori, G; Martínez-Vidal, F; Neri, N; Paoloni, E; Rama, M; Rizzo, G; Sandrelli, F; Walsh, J; Haire, M; Judd, D; Paick, K; Wagoner, D E; Danielson, N; Elmer, P; Lau, Y P; Lü, C; Miftakov, V; Olsen, J; Smith, A J S; Telnov, A V; Bellini, F; Cavoto, G; Faccini, R; Ferrarotto, F; Ferroni, F; Gaspero, M; Li Gioi, L; Mazzoni, M A; Morganti, S; Pierini, M; Piredda, G; Safai-Tehrani, F; Voena, C; Christ, S; Wagner, G; Waldi, R; Adye, T; De Groot, N; Franek, B J; Geddes, N I; Gopal, G P; Olaiya, E O; Aleksan, Roy; Emery, S; Gaidot, A; Ganzhur, S F; Giraud, P F; Hamel de Monchenault, G; Kozanecki, Witold; Legendre, M; London, G W; Mayer, B; Schott, G; Vasseur, G; Yéche, C; Zito, M; Purohit, M V; Weidemann, A W; Wilson, J R; Yumiceva, F X; Aston, D; Bartoldus, R; Berger, N; Boyarski, A M; Buchmüller, O L; Claus, R; Convery, M R; Cristinziani, M; De Nardo, Gallieno; Dong, D; Dorfan, J; Dujmic, D; Dunwoodie, W M; Elsen, E E; Fan, S; Field, R C; Glanzman, T; Gowdy, S J; Hadig, T; Halyo, V; Hast, C; Hrynóva, T; Innes, W R; Kelsey, M H; Kim, P; Kocian, M L; Leith, D W G S; Libby, J; Luitz, S; Lüth, V; Lynch, H L; Marsiske, H; Messner, R; Müller, D R; O'Grady, C P; Ozcan, V E; Perazzo, A; Perl, M; Petrak, S; Ratcliff, B N; Roodman, A; Salnikov, A A; Schindler, R H; Schwiening, J; Simi, G; Snyder, A; Soha, A; Stelzer, J; Su, D; Sullivan, M K; Vavra, J; Wagner, S R; Weaver, M; Weinstein, A J R; Wisniewski, W J; Wittgen, M; Wright, D H; Yarritu, A K; Young, C C; Burchat, Patricia R; Edwards, A J; Meyer, T I; Petersen, B A; Roat, C; Ahmed, S; Alam, M S; Ernst, J A; Saeed, M A; Saleem, M; Wappler, F R; Bugg, W; Krishnamurthy, M; Spanier, S M; Eckmann, R; Kim, H; Ritchie, J L; Satpathy, A; Schwitters, R F; Izen, J M; Kitayama, I; Lou, X C; Ye, S; Bianchi, F; Bóna, M; Gallo, F; Gamba, D; Bosisio, L; Cartaro, C; Cossutti, F; Della Ricca, G; Dittongo, S; Grancagnolo, S; Lanceri, L; Poropat, P; Vuagnin, G; Panvini, R S; Banerjee, Sw; Brown, C M; Fortin, D; Jackson, P D; Kowalewski, R V; Roney, J M; Sobie, R J; Band, H R; Cheng, B; Dasu, S; Datta, M; Eichenbaum, A M; Graham, M; Hollar, J J; Johnson, J R; Kutter, P E; Li, H; Liu, R; Mihályi, A; Mohapatra, A K; Pan, Y; Prepost, R; Tan, P; Von Wimmersperg-Töller, J H; Wu, J; Wu, S L; Yu, Z; Greene, M G; Neal, H

    2004-01-01

    We present a study of the decays B0bar --> D(*)0 K(*)0bar using a sample of 124 million Upsilon(4S) --> B0bar B0 decays collected with the BaBar detector at the PEP-II asymmetric-energy e+e- collider at SLAC. We report evidence for the decay of B0 and B0bar mesons to the D*0 K_S final state with an average branching fraction BF(B --> D*0 K0bar) = (4.5 +/- 1.9 +/- 0.5) x 10^-5. Similarly, we measure BF(B --> D0 K0bar) = (6.2 +/- 1.2 +/- 0.4) x 10^-5 for the D0 K_S final state. We also measure BF(B0bar --> D0 K*0bar) = (6.2 +/- 1.4 +/- 0.6) x 10^-5 and set a 90% C.L. upper limit BF(B0bar --> D0bar K*0bar) < 4.1 x 10^-5. All results presented in this paper are preliminary.

  14. Orbital Support of Fast and Slow Inner Bars in Double Barred Galaxies

    CERN Document Server

    Maciejewski, Witold

    2010-01-01

    We analyze how the orbital support of the inner bar in a double-barred galaxy (nested bars) depends on the angular velocity (i.e. pattern speed) of this bar. We study orbits in seven models of double bars using the method of invariant loops. The range of pattern speed is covered exhaustively. We find that not all pattern speeds are allowed when the inner bar rotates in the same direction as the outer bar. Below a certain minimum pattern speed orbital support for the inner bar abruptly disappears, while at high values of this speed the orbits indicate an increasingly round bar that looks more like a twist in the nuclear isophotes than a dynamically independent component. For values between these two extremes, orbits supporting the inner bar extend further out as the bar's pattern speed decreases, their corresponding loops become more eccentric, pulsate more, and their rotation becomes increasingly non-uniform, as they speed up and slow down in their motion. Lower pattern speeds also lead to a less coherent bar...

  15. Too Much Bar and Not Enough Mitzvah? A Proposed Research Agenda on Bar/Bat Mitzvah

    Science.gov (United States)

    Schoenfeld, Stuart

    2010-01-01

    Jewish educators are understandably interested in research on how bar/bat mitzvah affect Jewish education or research on what Jewish schools have done to avoid the distortions of a focus on bar/bat mitzvah. Research might also focus on the somewhat different and more ambitious topic of the role that bar/bat mitzvah play in contemporary Jewish…

  16. Test of bar window with internal bars free from the glass surfaces

    DEFF Research Database (Denmark)

    Schultz, Jørgen Munthe

    1998-01-01

    A sealed glazing unit with 3 horisontal and 3 vertical bars and a reference glazing without bars have been tested in a guarded hotbox. The difference in measured heat loss coefficient between the two test objects is a measure of the thermal influence of the bars. The difference in heat loss...

  17. On the Relation between Spector's Bar Recursion and Modified Bar Recursion

    DEFF Research Database (Denmark)

    Oliva, Paulo Borges

    2002-01-01

    We introduce a variant of Spector's Bar Recursion in finite types to give a realizability interpretation of the classical axiom of dependent choice allowing for the extraction of witnesses from proofs of Sigma_1 formulas in classical analysis. We also give a bar recursive definition of the fan...... functional and study the relationship of our variant of Bar Recursion with others....

  18. Evaluation of Bus Vibration Comfort Based on Passenger Crowdsourcing Mode

    Directory of Open Access Journals (Sweden)

    Hong Zhao

    2016-01-01

    Full Text Available Vibration comfort is an important factor affecting the quality of service (QoS of bus. In order to make people involved in supervising bus’s vibration comfort and improve passengers’ riding experience, a novel mode of passenger crowdsourcing is introduced. In this paper, comfort degree of bus vibration is calculated from bus’s vibration signals collected by passengers’ smartphones and sent through WiFi to the Boa web server which shows the vibration comfort on the LCD deployed in bus and maybe trigger alarm lamp when the vibration is beyond the threshold. Three challenges here have been overcome: firstly, space coordinate transformation algorithm is used to solve the constant drift of signals collected; secondly, a low-pass filter is designed to isolate gravity from signals real-timely via limited computing resources; thirdly, an embedded evaluation system is developed according to the calculation procedure specified by criterion ISO 2631-1997. Meanwhile, the model proposed is tested in a practical running environment, the vibration data in whole travel are recorded and analyzed offline. The results show that comfort degree of vibration obtained from the experimental system is identical with the truth, and this mode is proved to be effective.

  19. The AI Bus architecture for distributed knowledge-based systems

    Science.gov (United States)

    Schultz, Roger D.; Stobie, Iain

    1991-01-01

    The AI Bus architecture is layered, distributed object oriented framework developed to support the requirements of advanced technology programs for an order of magnitude improvement in software costs. The consequent need for highly autonomous computer systems, adaptable to new technology advances over a long lifespan, led to the design of an open architecture and toolbox for building large scale, robust, production quality systems. The AI Bus accommodates a mix of knowledge based and conventional components, running on heterogeneous, distributed real world and testbed environment. The concepts and design is described of the AI Bus architecture and its current implementation status as a Unix C++ library or reusable objects. Each high level semiautonomous agent process consists of a number of knowledge sources together with interagent communication mechanisms based on shared blackboards and message passing acquaintances. Standard interfaces and protocols are followed for combining and validating subsystems. Dynamic probes or demons provide an event driven means for providing active objects with shared access to resources, and each other, while not violating their security.

  20. Safety evaluation of a hydrogen fueled transit bus

    Energy Technology Data Exchange (ETDEWEB)

    Coutts, D.A.; Thomas, J.K.; Hovis, G.L.; Wu, T.T. [Westinghouse Savannah River Co., Aiken, SC (United States)

    1997-12-31

    Hydrogen fueled vehicle demonstration projects must satisfy management and regulator safety expectations. This is often accomplished using hazard and safety analyses. Such an analysis has been completed to evaluate the safety of the H2Fuel bus to be operated in Augusta, Georgia. The evaluation methods and criteria used reflect the Department of Energy`s graded approach for qualifying and documenting nuclear and chemical facility safety. The work focused on the storage and distribution of hydrogen as the bus motor fuel with emphases on the technical and operational aspects of using metal hydride beds to store hydrogen. The safety evaluation demonstrated that the operation of the H2Fuel bus represents a moderate risk. This is the same risk level determined for operation of conventionally powered transit buses in the United States. By the same criteria, private passenger automobile travel in the United States is considered a high risk. The evaluation also identified several design and operational modifications that resulted in improved safety, operability, and reliability. The hazard assessment methodology used in this project has widespread applicability to other innovative operations and systems, and the techniques can serve as a template for other similar projects.

  1. Perspective Application of Passive Optical Network with Optimized Bus Topology

    Directory of Open Access Journals (Sweden)

    P. Lafata

    2012-06-01

    Full Text Available Passive optical networks (PONs represent a promising solution for modern access telecommunication networks.These networks are able to meet the increasing demands on transmission rate for demanding multimedia services,while they can offer typical shared transmission speed of 1.25 or 2.5 Gbps. The major role in deploying opticaldistribution networks ODNs plays the maximum attenuable loss, which is caused mainly by passive optical splitters.This paper proposes an innovative application of passive optical networks with optimized bus topology especially forlocal backbone data networks. Due to using only passive components, it is necessary to optimize certain parameters,especially an overall attenuation balance. Considering the possibility of such optimization, the passive optical networkwith optimized bus topology provides several interesting opportunities for specific applications. This paper will presentselected aspects of passive optical networks and splitters with asymmetric splitting ratio. The essential part is focusedon the practical demonstration of their use to optimize the passive optical network with bus topology, which acts as alocal backbone network for structured cabling systems, and for local data networks in large buildings.

  2. Designing Parallel Bus Using Universal Asynchronous Receiver Transmitter

    Directory of Open Access Journals (Sweden)

    Satyandra Sharad

    2013-04-01

    Full Text Available This paper entitled “DESIGNING PARALLEL BUSUSING UNIVERSAL ASYNCHRONOUS RECEIVER TRANSMITTER” is designed to the core of a UART interface module, which includes both receive and transmit modules, and the command parser. This paper will be a viable solution to design parallel buses with the help of UART. In the test bench , there is a RFM(register file model to which we write/read back data from just to check our design .The txt file issues serial inputs to the core and the core outputs parallel data and address in the form of bus. This bus is connected to our RFM (register file model instantiated in the test bench along with the design. This makes easy to retrieve parallel data from serial input. The base of the paper is to use microcontroller along with other components to interface with the physical world. In contrast, most serial communication must first be converted back into parallel form by a universal asynchronous receiver/transmitter (UART before they may be directly connected to a data bus. Both Transmissions (Parallel and Serial are used to connect peripheral devices and enable us to communicate with these devices. The UART core described here is designed using VHDL and implemented on Xilinx Vertex FPGA.

  3. An Electric Bus with a Battery Exchange System

    Directory of Open Access Journals (Sweden)

    Jeongyong Kim

    2015-07-01

    Full Text Available As part of the ongoing effort to be independent of petroleum resources and to be free from pollutant emission issues, various electric vehicles have been developed and tested through their integration with real world systems. In the current paper, yet another application specific EV for public transportation, an electric bus, is introduced and explained with results from the pilot test program which was carried out under real traffic conditions. The main feature of the current system is a battery exchanging mechanism mounted on the roof of the bus. The current configuration certainly requires an externally fabricated battery exchanging robot system that would complement the electric bus for a fully automated battery exchanging process. The major advantage of the current system is the quick re-charging of the electric energy through the physical battery exchange and the possible utilization of the battery exchange station as a mini scale energy storage system for grid system peak power shaving. With the total system solution approach for the public transportation system, it is fully expected to create outstanding business opportunities in number of areas such as battery suppliers, battery exchanging station management, battery leasing and many more.

  4. Ring Bus Architecture for a Solid-State Recorder

    Science.gov (United States)

    Walker, W. John; Kopf, Edward; Cox, Brian

    2008-01-01

    A document concisely describes a ring bus architecture for a proposed solid-state recorder (SSR) that would serve as buffer of data to be transmitted from a spacecraft to Earth. This architecture would afford fault tolerance needed for reliable operation in an anticipated high-radiation environment in which traditional SSRs cannot operate reliably. Features of the architecture include one or more controller boards and multiple memory boards interconnected in a ringlike topology. The interconnections would be high-speed serial links complying with the Institute of Electrical and Electronics Engineers (IEEE) standard 1393 (which pertains to a spaceborne fiber-optic data bus). Accordingly, each controller and memory board would be equipped with an IEEE-1393-compliant ring-bus-interface unit. The ringlike topology and the multiplicity of memory boards (and, optionally, of controller boards) would afford the redundancy needed for fault tolerance. Each board would be a fault-containment region. The IEEE 1393 links could be routed so that the SSR would continue to function even in the event of multiple failures. This architecture would also support scalability over a wide range. In a fully redundant configuration, it could accommodate between 1 and 125 memory boards.

  5. The Data Acquisition System Based on PMC Bus

    CERN Document Server

    Igarashi, Y; Higuchi, T; Ikeno, M; Inoue, E; Itoh, R; Kodama, H; Murakami, T; Nagasaka, Y; Nakao, M; Nakayoshi, K; Saitoh, M; Shimazaki, S; Suzuki, S Y; Tanaka, M; Tauchi, K; Varner, G; Yamauchi, M; Yasu, Y; Katayama, T; Watanabe, K; Ishizuka, M; Onozawa, S

    2003-01-01

    High energy physics experiments in KEK/Japan rush into over KHz trigger stage. Thus, we need a successor of the data acquisition(DAQ) system that replaces the CAMAC or FASTBUS systems. To meet these needs, we have developed a DAQ system which includes a crate, base-board modules, daughter cards for front-end A/D or T/D conversion, and back-end communication cards for data transfer and timing control. The size of the crate is for the 9U Euro-cards with the standard VME32 bus and extension connectors for power supply. The base-board comprises of a local bus with the sequencer connected to the front-end daughter cards via event buffering FIFOs, and the standard PMC (PCI mezzanine card) bus to be set a PMC processor unit to reduce data size from the front-end daughter cards. A data transfer module, which is connected to the event building system, and a trigger control unit, which communicates with the central timing controller are installed on the back-end communication card connected to the rear end of the base-...

  6. A 5' splice site enhances the recruitment of basal transcription initiation factors in vivo

    DEFF Research Database (Denmark)

    Damgaard, Christian Kroun; Kahns, Søren; Lykke-Andersen, Søren;

    2008-01-01

    promoter docking of transcription initiation factors TFIID, TFIIB, and TFIIH on a gene containing a functional 5′ splice site. In addition to their promoter association, the TFIID and TFIIH components, TBP and p89, are specifically recruited to the 5′ splice site region. Our data suggest a model in which......Transcription and pre-mRNA splicing are interdependent events. Although mechanisms governing the effects of transcription on splicing are becoming increasingly clear, the means by which splicing affects transcription remain elusive. Using cell lines stably expressing HIV-1 or β-globin m......RNAs, harboring wild-type or various 5′ splice site mutations, we demonstrate a strong positive correlation between splicing efficiency and transcription activity. Interestingly, a 5′ splice site can stimulate transcription even in the absence of splicing. Chromatin immunoprecipitation experiments show enhanced...

  7. The splicing activator DAZAP1 integrates splicing control into MEK/Erk-regulated cell proliferation and migration

    Science.gov (United States)

    Choudhury, Rajarshi; Roy, Sreerupa Ghose; Tsai, Yihsuan S.; Tripathy, Ashutosh; Graves, Lee M.; Wang, Zefeng

    2014-01-01

    Alternative splicing of pre-messenger RNA (mRNA) is a critical stage of gene regulation in response to environmental stimuli. Here we show that DAZAP1, an RNA-binding protein involved in mammalian development and spermatogenesis, promotes inclusion of weak exons through specific recognition of diverse cis-elements. The carboxy-terminal proline-rich domain of DAZAP1 interacts with and neutralizes general splicing inhibitors, and is sufficient to activate splicing when recruited to pre-mRNA. This domain is phosphorylated by the MEK/Erk (extracellular signal-regulated protein kinase) pathway and this modification is essential for the splicing regulatory activity and the nuclear/cytoplasmic translocation of DAZAP1. Using mRNA-seq, we identify endogenous splicing events regulated by DAZAP1, many of which are involved in maintaining cell growth. Knockdown or over-expression of DAZAP1 causes a cell proliferation defect. Taken together, these studies reveal a molecular mechanism that integrates splicing control into MEK/Erk-regulated cell proliferation.

  8. Tubular stabilizer bars – calculations and construction

    Directory of Open Access Journals (Sweden)

    Adam-Markus WITTEK

    2011-01-01

    Full Text Available The article outlines the calculation methods for tubular stabilizer bars. Modern technological and structural solutions in contemporary cars are reflected also in the construction, selection and manufacturing of tubular stabilizer bars. A proper construction and the selection of parameters influence the strength properties, the weight, durability and reliability as well as the selection of an appropriate production method.

  9. Stabilizer bars: Part 1. Calculations and construction

    Directory of Open Access Journals (Sweden)

    Adam-Markus WITTEK

    2010-01-01

    Full Text Available The article outlines the calculation methods for stabilizer bars. Modern technological and structural solutions in contemporary cars are reflected also in the construction and manufacturing of stabilizer bars. A proper construction and the selection of parameters influence the strength properties, the weight, durability and reliability as well as the selection of an appropriate production method.

  10. The Bar Tack Machine. Module 16.

    Science.gov (United States)

    South Carolina State Dept. of Education, Columbia. Office of Vocational Education.

    This module on the bar tack machine, one in a series dealing with industrial sewing machines, their attachments, and operation, covers one topic: performing special operations on the bar tack machine. These components are provided: an introduction, directions, an objective, learning activities, student information, a student self-check, and a…

  11. Bar Study Stories. Issues in Prevention

    Science.gov (United States)

    Higher Education Center for Alcohol, Drug Abuse, and Violence Prevention, 2012

    2012-01-01

    This issue of "Issues in Prevention" focuses on the impact of the availability of drinks in licensed establishments, such as bars and taverns on student drinking. This issue contains the following articles: (1) Cheap Drinks at College Bars Can Escalate Student Drinking (John D. Clapp); (2) High Alcohol Outlet Density: A Problem for Campuses and…

  12. Constraints from microlensing on the COBE bar

    Science.gov (United States)

    Zhao, H. S.

    Since the first review of converging evidences for a bar in the center of the Galaxy by de Zeeuw (1992) at the IAU Sym. 153 in Gent five years ago, the Galactic bar idea has been put on a solid footing by an influx of new data (COBE/DIRBE maps, star count data of bulge red clump giants, microlensing optical depth, and bulge stellar proper motions, etc.) and a burst of increasingly sophisticated theoretical models (triaxial luminosity models of Dwek et al. 1994, and Binney, Gerhard & Spergel 1997, steady state stellar bar dynamical model of Zhao 1996, combined luminosity, microlensing and gas kinematics models of Zhao, Rich & Spergel 1996, and Bissantz et al. 1997, etc.), which fit new data and improve upon earlier simple bulge/bar models (Kent 1992, Binney et al. 1991, Blitz & Spergel 1991). While research in this field shifts more and more to constraining the exact phase space and parameter space of the bar, both the non-uniqueness of and the mismatches among bars from different datasets start to show up. I compare the bar from microlensing data with the COBE bar and point out the effects the non-uniqueness.

  13. [Development of cereal bar with pineapple skin].

    Science.gov (United States)

    Fonseca, Renata Siqueira; Del Santo, Victor Rogério; Souza, Gilberto Batista de; Pereira, Cíntia Alessandra Matiucci

    2011-06-01

    The cereal bars are multi-component products consisting of cereals, dried fruit and syrup binder and may be added to the consumable parts of fruits and vegetables which usually are not exploited and have high nutritional value, thereby reducing food waste. It was developed a jam with pineapple skin, which it was utilized in 13.5% in the cereal bar formulation. The cereal bar was sensorial evaluated and had its centesimal and mineral composition determined. The new product achieved average of 8.3 for global impression using 9 points hedonic scale, 91% of acceptance rate and 67% of purchase intent. In this first use of pineapple skin jam as food ingredient it can be concluded that its aggregation in the cereal bar formula is feasible, making an accepted product with fibers, proteins and minerals, as an alternative to traditional cereal bars.

  14. A COMPLETE THREE-DIMENSIONAL FINITE ELEMENT ANALYSIS OF THE BAR-BAR TENSILE IMPACT APPARATUS

    Institute of Scientific and Technical Information of China (English)

    万华培; 汪洋; 夏源明

    2003-01-01

    A complete three-dimensional FEM model of the Bar-Bar Tensile Impact Apparatus (BTIA) is constructed, in which the slots in the bars and the glue layers between the bars and the flat-shaped specimen are included. For elastic-plastic specimen material, Ly12cz aluminum alloy, the process of tensile impact experiments is simulated and the matching relation between the specimen geometry and the bars is investigated. Based on the FEM analysis, an iterative method is proposed to design a reasonable specimen geometry for obtaining the true dynamic stress-strain relation for a certain specimen material.

  15. Life cycle cost analysis of a car, a city bus and an intercity bus powertrain for year 2005 and 2020

    International Nuclear Information System (INIS)

    The international economy, in the beginning of the 20th century, is characterized by uncertainty about the supply and the price of oil. Together with the fast decrease of electrical propulsion component prices, it becomes more and more cost effective to develop vehicles with alternative powertrains. This paper focuses on two questions: Are alternative powertrains especially cost effective for specific applications?; How does an increased fossil fuel price influences the choose of powertrain? To assess these questions, a computer tool named THEPS, developed in a Ph.D. project, is used. Three applications and three scenarios are analysed. The applications, a car, a city bus and an intercity bus, are vehicles all assumed to operate in Sweden. One scenario represents year 2005, the other two year 2020. The two future scenarios are characterized by different fossil fuel prices. The study, presented in the paper, indicates that alternative powertrains can be competitive from a cost perspective, in some applications, already in year 2005. It is for example cost effective to equip a city bus, running in countries with a high fuel price, with a hybrid powertrain. The study also indicates that pure electric, hybrid and/or fuel cell cars will probably be a more cost effective choice than conventional cars in year 2020. Another indication is that it will not be clear which powertrain concept to choose. The reason is that many cost effective powertrain concepts will be offered. The best choice will depend on the application

  16. Bitmap-Wise Wireless M-Bus Coordination for Sustainable Real Time Energy Management

    Directory of Open Access Journals (Sweden)

    Kwang-il Hwang

    2014-07-01

    Full Text Available Even though WM-Bus is being considered to be the most promising network protocol for smart metering, it is not suitable for a sustainable real-time home energy management system (HEMS, which requires higher reliability and longer lifetime despite real time bi-directional communications. Therefore, in this paper we propose a Bitmap-wise WM-Bus (BWM-Bus, coping well with sustainable real-time HEMS. In particular, the proposed scheme addresses the several problems in WM-Bus for HEMS by introducing novel functions: asynchronous meter trigger, adaptive slot scheduling, and bitmap-wise retransmission request. Through experiments, we demonstrate that BWM-Bus guarantees higher data success ratio with lower data aggregation time, as well as longer lifetime than WM-Bus standard.

  17. Identification of voltage stability condition of a power system using measurements of bus variables

    Directory of Open Access Journals (Sweden)

    Durlav Hazarika

    2014-12-01

    Full Text Available Several online methods were proposed for investigating the voltage stability condition of an interconnected power system using the measurements of voltage and current phasors at a bus. For this purpose, phasor measurement units (PMUs are used. A PMU is a device which measures the electrical waves on an electrical network, using a common time source (reference bus for synchronisation. This study proposes a method for online monitoring of voltage stability condition of a power system using measurements of bus variables namely – (i real power, (ii reactive power and (iii bus voltage magnitude at a bus. The measurements of real power, reactive power and bus voltage magnitude could be extracted/captured from a smart energy meter. The financial involvement for implementation of the proposed method would significantly lower compared with the PMU-based method.

  18. Design and VHDL simulation of a special high speed spaceborne bus controller

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    The application of high speed data bus on the satellites having several remote sensors could not only satisfy the demand of high speed data transfer,but also could reuse the equipment at both the com-ponent and subsystem levels for other space missions,thus reducing the costs of on-board processing system integration.In this article,a special high speed data bus with simple interfaces is chosen for transferring the data produced by remote sensors and other instrumentations.First,the function and the structure of the data bus are discussed carefully.And then,the bus controller,which is a key mod-ule of the data bus,is designed.At last,the function and performance of the bus controller are verified by VHDL simulation.

  19. SunLine Transit Agency Advanced Technology Fuel Cell Bus Evaluation: Third Results Reports

    Energy Technology Data Exchange (ETDEWEB)

    Eudy, L.; Chandler, K.

    2012-05-01

    This report describes operations at SunLine Transit Agency for their newest prototype fuel cell bus and five compressed natural gas (CNG) buses. In May 2010, SunLine began operating its sixth-generation hydrogen fueled bus, an Advanced Technology (AT) fuel cell bus that incorporates the latest design improvements to reduce weight and increase reliability and performance. The agency is collaborating with the U.S. Department of Energy's (DOE) National Renewable Energy Laboratory (NREL) to evaluate the bus in revenue service. NREL has previously published two reports documenting the operation of the fuel cell bus in service. This report provides a summary of the results with a focus on the bus operation from July 2011 through January 2012.

  20. SunLine Transit Agency Advanced Technology Fuel Cell Bus Evaluation: Fourth Results Report

    Energy Technology Data Exchange (ETDEWEB)

    Eudy, L.; Chandler, K.

    2013-01-01

    SunLine Transit Agency, which provides public transit services to the Coachella Valley area of California, has demonstrated hydrogen and fuel cell bus technologies for more than 10 years. In May 2010, SunLine began demonstrating the advanced technology (AT) fuel cell bus with a hybrid electric propulsion system, fuel cell power system, and lithium-based hybrid batteries. This report describes operations at SunLine for the AT fuel cell bus and five compressed natural gas buses. The U.S. Department of Energy's National Renewable Energy Laboratory (NREL) is working with SunLine to evaluate the bus in real-world service to document the results and help determine the progress toward technology readiness. NREL has previously published three reports documenting the operation of the fuel cell bus in service. This report provides a summary of the results with a focus on the bus operation from February 2012 through November 2012.

  1. Correction of a Cystic Fibrosis Splicing Mutation by Antisense Oligonucleotides.

    Science.gov (United States)

    Igreja, Susana; Clarke, Luka A; Botelho, Hugo M; Marques, Luís; Amaral, Margarida D

    2016-02-01

    Cystic fibrosis (CF), the most common life-threatening genetic disease in Caucasians, is caused by ∼2,000 different mutations in the CF transmembrane conductance regulator (CFTR) gene. A significant fraction of these (∼13%) affect pre-mRNA splicing for which novel therapies have been somewhat neglected. We have previously described the effect of the CFTR splicing mutation c.2657+5G>A in IVS16, showing that it originates transcripts lacking exon 16 as well as wild-type transcripts. Here, we tested an RNA-based antisense oligonucleotide (AON) strategy to correct the aberrant splicing caused by this mutation. Two AONs (AON1/2) complementary to the pre-mRNA IVS16 mutant region were designed and their effect on splicing was assessed at the RNA and protein levels, on intracellular protein localization and function. To this end, we used the 2657+5G>A mutant CFTR minigene stably expressed in HEK293 Flp-In cells that express a single copy of the transgene. RNA data from AON1-treated mutant cells show that exon 16 inclusion was almost completely restored (to 95%), also resulting in increased levels of correctly localized CFTR protein at the plasma membrane (PM) and with increased function. A novel two-color CFTR splicing reporter minigene developed here allowed the quantitative monitoring of splicing by automated microscopy localization of CFTR at the PM. The AON strategy is thus a promising therapeutic approach for the specific correction of alternative splicing.

  2. Method of predicting Splice Sites based on signal interactions

    Directory of Open Access Journals (Sweden)

    Deogun Jitender S

    2006-04-01

    Full Text Available Abstract Background Predicting and proper ranking of canonical splice sites (SSs is a challenging problem in bioinformatics and machine learning communities. Any progress in SSs recognition will lead to better understanding of splicing mechanism. We introduce several new approaches of combining a priori knowledge for improved SS detection. First, we design our new Bayesian SS sensor based on oligonucleotide counting. To further enhance prediction quality, we applied our new de novo motif detection tool MHMMotif to intronic ends and exons. We combine elements found with sensor information using Naive Bayesian Network, as implemented in our new tool SpliceScan. Results According to our tests, the Bayesian sensor outperforms the contemporary Maximum Entropy sensor for 5' SS detection. We report a number of putative Exonic (ESE and Intronic (ISE Splicing Enhancers found by MHMMotif tool. T-test statistics on mouse/rat intronic alignments indicates, that detected elements are on average more conserved as compared to other oligos, which supports our assumption of their functional importance. The tool has been shown to outperform the SpliceView, GeneSplicer, NNSplice, Genio and NetUTR tools for the test set of human genes. SpliceScan outperforms all contemporary ab initio gene structural prediction tools on the set of 5' UTR gene fragments. Conclusion Designed methods have many attractive properties, compared to existing approaches. Bayesian sensor, MHMMotif program and SpliceScan tools are freely available on our web site. Reviewers This article was reviewed by Manyuan Long, Arcady Mushegian and Mikhail Gelfand.

  3. mRNA 5′-leader trans-splicing in the chordates

    OpenAIRE

    Vandenberghe, Amanda E.; Meedel, Thomas H.; Hastings, Kenneth E.M.

    2001-01-01

    We report the discovery of mRNA 5′-leader trans-splicing (SL trans-splicing) in the chordates. In the ascidian protochordate Ciona intestinalis, the mRNAs of at least seven genes undergo trans-splicing of a 16-nucleotide 5′-leader apparently derived from a 46-nucleotide RNA that shares features with previously characterized splice donor SL RNAs. SL trans-splicing was known previously to occur in several protist and metazoan phyla, however, this is the first report of SL trans-splicing within ...

  4. Best Operational and Maintenance Practices for City Bus Fleets to Maximize Fuel Economy

    OpenAIRE

    World Bank

    2011-01-01

    In most large cities in developing countries, buses continue to be the public transport option of choice, carrying a large share of urban travelers. However, transit bus companies in these countries are often cash-strapped. In many cases, the operating cost per bus kilometer exceeds revenues and bus fares are often kept low irrespective of the cost of providing service. Many cities are dom...

  5. Reducing carbon emissions by introducing electric vehicle enhanced dedicated bus lanes

    OpenAIRE

    Doolan, Ronan; Muntean, Gabriel-Miro

    2014-01-01

    Most cities have special lanes dedicated to buses, however these lanes are rarely used at full capacity. At the same time governments around the world are encouraging people to buy electric vehicles. This paper proposes the creation of electric vehicle enhanced dedicated bus lanes (E-DBL), by allowing electric vehicles access to bus lanes, in order to improve the use of road capacity. By opening bus lanes to electric vehicles, traffic congestion could be eased, the range ...

  6. The impact of bus drivers ’ lifestyle on the occurrence of health problems and absenteeism

    OpenAIRE

    Andrej Jerman; Maja Meško

    2016-01-01

    Research Question: Do bus drivers’ lifestyles affect the occurrence of health problems and absenteeism? Purpose: The purpose of the study was to determine whether the lifestyle of professional bus drivers affects the occurrence of health problems and the phenomenon of absenteeism. Method: A quantitative research method was used in the research. Data were collected using a structured questionnaire, on a sample of 230 professional bus drivers from differ...

  7. The Bus Extension Module Design and Verification of POSAFE-Q Using LVDS

    International Nuclear Information System (INIS)

    This paper described the Bus Extension Module using Low Voltage Differential Signal (LVDS). A Bus Extension Module use Safety-Related PLC (Programmable Logic Controller), called POSAFE-Q (made by POSCO ICT), for handling many data (I/O) extension rack. A processor module of POSAFE-Q can control I/O Module installed another rack. This paper explains Bus Extension Module and Data transfer technology using LVDS. (author)

  8. Introduction to corridor selection & assessment for Bus Rapid Transit System (BRTS) in Hyderabad

    OpenAIRE

    Bhanu Kireeti Chanda; Maddali Sai Satya Goutham

    2014-01-01

    Bus rapid transit system is an innovation and it is up gradation to the present transport system. BRT is affordable, adaptable and cost effective. The term of rapid transit system means a form of high speed urban passenger transportation. Here, the mode of transportation is bus hence it is called as bus rapid transit system (BRTS). Transportation facilities and the system will be different form different countries. Especially for the developing countries, transportation is a problem and BR...

  9. The influence of bus stop on traffic flow with velocity-difference-separation model

    Science.gov (United States)

    Zheng, Pengjun; Wang, Wei; Ge, Hongxia

    2016-06-01

    Based on velocity-difference-separation model, the mixed traffic flow on two-lane road is investigated. For a fixed road length, the influence of bus and bus stops on traffic flow is studied with the increasing traffic density. Compared with the result without bus stops given by Li et al., a new traffic state is found, which is valuable for studying the impacts of public transport on urban traffic flow.

  10. A Prediction System Using a P2P Overlay Network for a Bus Arrival System

    Directory of Open Access Journals (Sweden)

    Ssu-Hsuan Lu

    2014-01-01

    Full Text Available Along with the evolution of times and the surge of metropolitan populations, government agencies often promote the construction of public transport. Unlike rail transportation or rapid transit systems, it is often difficult to estimate the vehicle arrival times at each station in a bus transportation system due to metropolitan transportation congestion. Traffic status is often monitored using wireless sensor networks (WSNs. However, WSNs are always separated from one another spatially. Recent studies have considered the connection of multiple sensor networks. This study considers a combination view of peer-to-peer (P2P overlay networks and WSN architecture to predict bus arrival times. Each bus station, which is also a P2P overlay peer, is connected in a P2P overlay network. A sensor installed in each bus can receive data via peers to obtain the moving speed of a bus. Then, each peer can exchange its data to predict bus arrival times at bus stations. This method can considerably increase the accuracy with which bus arrival times can be predicted and can provide traffic status with high precision. Furthermore, these data can also be used to plan new bus routes according to the information gathered.

  11. Bitmap-Wise Wireless M-Bus Coordination for Sustainable Real Time Energy Management

    OpenAIRE

    Kwang-il Hwang; Sung-wook Nam

    2014-01-01

    Even though WM-Bus is being considered to be the most promising network protocol for smart metering, it is not suitable for a sustainable real-time home energy management system (HEMS), which requires higher reliability and longer lifetime despite real time bi-directional communications. Therefore, in this paper we propose a Bitmap-wise WM-Bus (BWM-Bus), coping well with sustainable real-time HEMS. In particular, the proposed scheme addresses the several problems in WM-Bus for HEMS by introdu...

  12. An interactive wireless communication system for visually impaired people using city bus transport.

    Science.gov (United States)

    Wang, Hsiao-Lan; Chen, Ya-Ping; Rau, Chi-Lun; Yu, Chung-Huang

    2014-05-01

    Visually impaired people have difficulty accessing information about public transportation systems. Several systems have been developed for assisting visually impaired and blind people to use the city bus. Most systems provide only one-way communication and require high-cost and complex equipment. The purpose of this study is to reduce the difficulties faced by visually impaired people when taking city buses, using an interactive wireless communication system. The system comprised a user module and a bus module to establish a direct one-to-one connection. When the user inputs 4-digit numbers, the user module immediately sends out the information. If the bus module receives the matched bus number, it buzzes and the warning LED flashes to notify the bus driver that someone is waiting to board on the bus. User tests were conducted by two visually impaired people in a simulated vehicle and a city bus. The success rate of interactive wireless communication, recognizing the arrival of the bus and boarding the correct bus reached 100% in all of the tests. The interactive wireless communication aid system is a valid and low-cost device for assisting visually impaired people to use city buses.

  13. Analysis of a splice array experiment elucidates roles of chromatin elongation factor Spt4-5 in splicing.

    Directory of Open Access Journals (Sweden)

    Yuanyuan Xiao

    2005-09-01

    Full Text Available Splicing is an important process for regulation of gene expression in eukaryotes, and it has important functional links to other steps of gene expression. Two examples of these linkages include Ceg1, a component of the mRNA capping enzyme, and the chromatin elongation factors Spt4-5, both of which have recently been shown to play a role in the normal splicing of several genes in the yeast Saccharomyces cerevisiae. Using a genomic approach to characterize the roles of Spt4-5 in splicing, we used splicing-sensitive DNA microarrays to identify specific sets of genes that are mis-spliced in ceg1, spt4, and spt5 mutants. In the context of a complex, nested, experimental design featuring 22 dye-swap array hybridizations, comprising both biological and technical replicates, we applied five appropriate statistical models for assessing differential expression between wild-type and the mutants. To refine selection of differential expression genes, we then used a robust model-synthesizing approach, Differential Expression via Distance Synthesis, to integrate all five models. The resultant list of differentially expressed genes was then further analyzed with regard to select attributes: we found that highly transcribed genes with long introns were most sensitive to spt mutations. QPCR confirmation of differential expression was established for the limited number of genes evaluated. In this paper, we showcase splicing array technology, as well as powerful, yet general, statistical methodology for assessing differential expression, in the context of a real, complex experimental design. Our results suggest that the Spt4-Spt5 complex may help coordinate splicing with transcription under conditions that present kinetic challenges to spliceosome assembly or function.

  14. $\\bar K$-Nuclear Deeply Bound States?

    CERN Document Server

    Gal, A

    2006-01-01

    Following the prediction by Akaishi and Yamazaki of relatively narrow $\\bar K$-nuclear states, deeply bound by over 100 MeV where the main decay channel $\\bar K N \\to \\pi \\Sigma$ is closed, several experimental signals in stopped $K^-$ reactions on light nuclei have been interpreted recently as due to such states. In this talk I review (i) the evidence from $K^-$-atom data for a {\\it deep} $\\bar K$-nucleus potential, as attractive as $V_{\\bar K}(\\rho_0) \\sim -(150 - 200)$ MeV at nuclear matter density, that could support such states; and (ii) the theoretical arguments for a {\\it shallow} potential, $V_{\\bar K}(\\rho_0) \\sim -(40 - 60)$ MeV. I then review a recent work by Mare\\v{s}, Friedman and Gal in which $\\bar K$-nuclear bound states are generated dynamically across the periodic table, using a RMF Lagrangian that couples the $\\bar K$ to the scalar and vector meson fields mediating the nuclear interactions. Substantial polarization of the core nucleus is found for light nuclei, with central nuclear densities...

  15. NGC 4340 Double Bar + Fossil Nuclear Ring

    CERN Document Server

    Erwin, P; Beckman, J E

    2000-01-01

    NGC 4340 is a double-barred SB0 galaxy in the Virgo cluster (Wozniak et al. 1995, A&AS 111, 115). Here, we show that this galaxy also posseses a luminous stellar nuclear ring of relatively old stars with little or no gas. The ring lies just outside the inner bar, at the probable inner inner Lindblad resonance (IILR) of the outer bar. Careful inspection of the isophotes and unsharp masks shows that the two bars are slightly misaligned, which suggests they may be independently rotating. The bright nuclear ring distorts the isophotes and ellipse fits and is most clearly seen in the unsharp mask (an inner bar also visible). B-R color maps show no features associated with the ring: it is the same color as the surrounding bulge, and thus probably an old, ``fossil'' remnant of an earlier star-formation episode. We use Simien & Prugniel's (1997, A&AS 126, 15) major-axis velocities to compute resonance curves; we use our spectrum along the outer-bar major axis to estimate that bar's pattern speed. The Omeg...

  16. Impact resistance of bar glasses.

    Science.gov (United States)

    Shepherd, J P; Huggett, R H; Kidner, G

    1993-12-01

    Bar glasses are often used as weapons in interpersonal violence. Violence often erupts spontaneously and assailants use objects close to hand as weapons. After an initial national Accident and Emergency Department study to identify glass designs most often implicated in interpersonal violence, the impact resistance of 1-pint beer glasses was tested in a materials laboratory with a Zwick 5102 pendulum impact tester. Both straight-sided (nonik) glasses (annealed and tempered) and handled tankards (annealed) were tested to destruction. The impact resistance of new glasses was compared with that of glasses subjected to wear. The mean impact resistance of new annealed noniks did not differ significantly although new glasses were significantly more resistant than worn glasses (p shards although the thicker bases remained intact. The mean impact resistance of new annealed noniks was 0.5 J, of worn annealed noniks 0.08 J, of tempered new noniks > 4 J, of worn tempered noniks 0.18 J, and of tankards, 1.7 J.(ABSTRACT TRUNCATED AT 250 WORDS) PMID:8263994

  17. Sec16 alternative splicing dynamically controls COPII transport efficiency.

    Science.gov (United States)

    Wilhelmi, Ilka; Kanski, Regina; Neumann, Alexander; Herdt, Olga; Hoff, Florian; Jacob, Ralf; Preußner, Marco; Heyd, Florian

    2016-08-05

    The transport of secretory proteins from the endoplasmic reticulum (ER) to the Golgi depends on COPII-coated vesicles. While the basic principles of the COPII machinery have been identified, it remains largely unknown how COPII transport is regulated to accommodate tissue- or activation-specific differences in cargo load and identity. Here we show that activation-induced alternative splicing of Sec16 controls adaptation of COPII transport to increased secretory cargo upon T-cell activation. Using splice-site blocking morpholinos and CRISPR/Cas9-mediated genome engineering, we show that the number of ER exit sites, COPII dynamics and transport efficiency depend on Sec16 alternative splicing. As the mechanistic basis, we suggest the C-terminal Sec16 domain to be a splicing-controlled protein interaction platform, with individual isoforms showing differential abilities to recruit COPII components. Our work connects the COPII pathway with alternative splicing, adding a new regulatory layer to protein secretion and its adaptation to changing cellular environments.

  18. LHC dipole magnet splice resistance from SM18 data mining

    International Nuclear Information System (INIS)

    The splice incident which happened during commissioning of the LHC on the 19. of September 2008 caused damage to several magnets and adjacent equipment. This raised not only the question of how it happened, but also about the state of all other splices. The inter magnet splices were immediately studied and new measurements recorded, but the internal magnet splices were still a concern. At the Chamonix meeting in January 2009, the CERN management decided to create a working group to analyse quench data of the magnet acceptance tests in an attempt to find indications for bad splices in the main dipoles. This resulted in a data-mining project that took about one year to complete. This presentation describes how the data was stored, extracted and analysed reusing existing 'LabVIEW' based tools, during this campaign more than 23000 magnet performance measurements were scrutinized. We also present the encountered difficulties and the importance of combining measured data with operator notes in the logbook. (authors)

  19. Two new splice variants in porcine PPARGC1A

    Directory of Open Access Journals (Sweden)

    Peelman Luc J

    2008-12-01

    Full Text Available Abstract Background Peroxisome proliferator-activated receptor γ coactivator 1α (PPARGC1A is a coactivator with a vital and central role in fat and energy metabolism. It is considered to be a candidate gene for meat quality in pigs and is involved in the development of obesity and diabetes in humans. How its many functions are regulated, is however still largely unclear. Therefore a transcription profile of PPARGC1A in 32 tissues and 4 embryonic developmental stages in the pig was constructed by screening its cDNA for possible splice variants with exon-spanning primers. Findings This led to the discovery of 2 new splice variants in the pig, which were subsequently also detected in human tissues. In these variants, exon 8 was either completely or partly (the last 66 bp were conserved spliced out, potentially coding for a much shorter protein of respectively 337 and 359 amino acids (aa, of which the first 291 aa would be the same compared to the complete protein (796 aa. Conclusion Considering the functional domains of the PPARGC1A protein, it is very likely these splice variants considerably affect the function of the protein and alternative splicing could be one of the mechanisms by which the diverse functions of PPARGC1A are regulated.

  20. RNA splicing in a new rhabdovirus from Culex mosquitoes.

    Science.gov (United States)

    Kuwata, Ryusei; Isawa, Haruhiko; Hoshino, Keita; Tsuda, Yoshio; Yanase, Tohru; Sasaki, Toshinori; Kobayashi, Mutsuo; Sawabe, Kyoko

    2011-07-01

    Among members of the order Mononegavirales, RNA splicing events have been found only in the family Bornaviridae. Here, we report that a new rhabdovirus isolated from the mosquito Culex tritaeniorhynchus replicates in the nuclei of infected cells and requires RNA splicing for viral mRNA maturation. The virus, designated Culex tritaeniorhynchus rhabdovirus (CTRV), shares a similar genome organization with other rhabdoviruses, except for the presence of a putative intron in the coding region for the L protein. Molecular phylogenetic studies indicated that CTRV belongs to the family Rhabdoviridae, but it is yet to be assigned a genus. Electron microscopic analysis revealed that the CTRV virion is extremely elongated, unlike virions of rhabdoviruses, which are generally bullet shaped. Northern hybridization confirmed that a large transcript (approximately 6,500 nucleotides [nt]) from the CTRV L gene was present in the infected cells. Strand-specific reverse transcription-PCR (RT-PCR) analyses identified the intron-exon boundaries and the 76-nt intron sequence, which contains the typical motif for eukaryotic spliceosomal intron-splice donor/acceptor sites (GU-AG), a predicted branch point, and a polypyrimidine tract. In situ hybridization exhibited that viral RNAs are primarily localized in the nucleus of infected cells, indicating that CTRV replicates in the nucleus and is allowed to utilize the host's nuclear splicing machinery. This is the first report of RNA splicing among the members of the family Rhabdoviridae.