WorldWideScience

Sample records for brown rot fungus

  1. Efficient xylose fermentation by the brown rot fungus Neolentinus lepideus.

    Science.gov (United States)

    Okamoto, Kenji; Kanawaku, Ryuichi; Masumoto, Masaru; Yanase, Hideshi

    2012-02-10

    The efficient production of bioethanol on an industrial scale requires the use of renewable lignocellulosic biomass as a starting material. A limiting factor in developing efficient processes is identifying microorganisms that are able to effectively ferment xylose, the major pentose sugar found in hemicellulose, and break down carbohydrate polymers without pre-treatment steps. Here, a basidiomycete brown rot fungus was isolated as a new biocatalyst with unprecedented fermentability, as it was capable of converting not only the 6-carbon sugars constituting cellulose, but also the major 5-carbon sugar xylose in hemicelluloses, to ethanol. The fungus was identified as Neolentinus lepideus and was capable of assimilating and fermenting xylose to ethanol in yields of 0.30, 0.33, and 0.34 g of ethanol per g of xylose consumed under aerobic, oxygen-limited, and anaerobic conditions, respectively. A small amount of xylitol was detected as the major by-product of xylose metabolism. N. lepideus produced ethanol from glucose, mannose, galactose, cellobiose, maltose, and lactose with yields ranging from 0.34 to 0.38 g ethanol per g sugar consumed, and also exhibited relatively favorable conversion of non-pretreated starch, xylan, and wheat bran. These results suggest that N. lepideus is a promising candidate for cost-effective and environmentally friendly ethanol production from lignocellulosic biomass. To our knowledge, this is the first report on efficient ethanol fermentation from various carbohydrates, including xylose, by a naturally occurring brown rot fungus. PMID:22226194

  2. EVIDENCE FOR CLEAVAGE OF LIGNIN BY A BROWN ROT FUNGUS

    Science.gov (United States)

    Biodegradation by brown-rot fungi is quantitatively one of the most important fates of lignocellulose in nature. It has long been thought that these fungi do not degrade lignin significantly, and that their activities on this abundant aromatic biopolymer are limited to minor oxidative modifications....

  3. Characterization of a Brown Rot Fungus Isolated from Dwarf Flowering Almond in Korea

    OpenAIRE

    Shim, Myoung Yong; Jeon, Young Jae; Kim, Seong Hwan

    2007-01-01

    The fruits showing brown rot symptom on dwarf flowering almond were found in Gongju, Chungchungnam-Do in Korea in July 2005. Small water-soaked lesions on the fruits were initiated, and gradually developed to soft rot covered with gray conidia. Then the diseased fruits were shrunk and became grayish-black mummies. A fungus was isolated from the diseased fruit and its morphological, cultural and molecular genetic characteristics were investigated. Typical blastospores of Monilinia spp. were ob...

  4. Short read sequencing for Genomic Analysis of the brown rot fungus Fibroporia radiculosa

    Science.gov (United States)

    The practical capability of short read sequencing for whole genome gene prediction was investigated for Fibroporia radiculosa, a copper-tolerant basidiomycete fungus that causes brown rot decay of wood. Illumina GAIIX reads from a single run of a paired-end library (75 nt read length, 300 bp insert...

  5. Evidence of Subterranean Termite Feeding Deterrent Produced by Brown Rot Fungus Fibroporia radiculosa (Peck) Parmasto 1968 (Polyporales, Fomitopsidaceae).

    Science.gov (United States)

    Kamaluddin, Nadia Nuraniya; Nakagawa-Izumi, Akiko; Nishizawa, Shota; Fukunaga, Ayuko; Doi, Shuichi; Yoshimura, Tsuyoshi; Horisawa, Sakae

    2016-01-01

    We found that decayed wood stakes with no termite damage collected from a termite-infested field exhibited a deterrent effect against the termite Reticulitermes speratus, Kolbe, 1885. The effect was observed to be lost or reduced by drying. After identification, it was found that the decayed stakes were infected by brown rot fungus Fibroporia radiculosa (Peck) Parmasto, 1968. In a no-choice feeding test, wood blocks decayed by this fungus under laboratory condition deterred R. speratus feeding and n-hexane extract from the decayed stake and blocks induced termite mortality. These data provided an insight into the interaction between wood-rot fungi and wood-feeding termites. PMID:27548231

  6. Transcriptional profiles of laccase genes in the brown rot fungus Postia placenta MAD-R-698.

    Science.gov (United States)

    An, Hongde; Wei, Dongsheng; Xiao, Tingting

    2015-09-01

    One of the laccase isoforms in the brown rot fungus Postia placenta is thought to contribute to the production of hydroxyl radicals, which play an important role in lignocellulose degradation. However, the presence of at least two laccase isoforms in this fungus makes it difficult to understand the details of this mechanism. In this study, we systematically investigated the transcriptional patterns of two laccase genes, Pplcc1 and Pplcc2, by quantitative PCR (qPCR) to better understand the mechanism. The qPCR results showed that neither of the two genes was expressed constitutively throughout growth in liquid culture or during the degradation of a woody substrate. Transcription of Pplcc1 was upregulated under nitrogen depletion and in response to a high concentration of copper in liquid culture, and during the initial colonization of intact aspen wafer. However, it was subject to catabolite repression by a high concentration of glucose. Transcription of Pplcc2 was upregulated by stresses caused by ferulic acid, 2, 6-dimethylbenzoic acid, and ethanol, and under osmotic stress in liquid culture. However, the transcription of Pplcc2 was downregulated upon contact with the woody substrate in solid culture. These results indicate that Pplcc1 and Pplcc2 are differentially regulated in liquid and solid cultures. Pplcc1 seems to play the major role in producing hydroxyl radicals and Pplcc2 in the stress response during the degradation of a woody substrate. PMID:26231371

  7. Effect of biodegradation on thermogravimetric and chemical characteristics of hardwood and softwood by brown-rot fungus.

    Science.gov (United States)

    Gao, Zhenzhong; Fan, Qi; He, Zesen; Wang, Zhinan; Wang, Xiaobo; Sun, Jin

    2016-07-01

    The thermogravimetric and chemical characterization of hardwood Eucalyptus urophylla (Ep) and softwood Pinus massoniana (Mp) pretreated by brown-rot fungus Gloeophyllum trabeum were investigated. The results indicated that the brown-rot fungus pretreatment can optimize the thermal decomposition and decrease the initiation temperatures (8-11°C lower) of both the Ep and Mp pyrolysis. The mean activation energy values of the bio-treated samples were 29.7kJ/mol (for Ep) and 42.3kJ/mol (for Mp) lower than that of the un-treated samples at the conversion rate from 0.1 to 0.7 based on Flynn-Wall-Ozawa (FWO) method. After the bio-pretreatment, the required temperatures were lower (4-7°C) for the pyrolysis rates of hemicellulose and cellulose in Mp reaching maximum and termination. However, the situation was just the opposite for Ep. The variations in chemical properties of hydrogen bonding, as well as the relative changes in lignin/carbohydrate composition of both wood species were also examined. PMID:27035476

  8. The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown-rot mechanism involving Fenton chemistry

    DEFF Research Database (Denmark)

    Rineau, Francois; Roth, Doris; Shah, Firoz;

    2012-01-01

    chemistry similar to that of brown-rot fungi. The set of enzymes expressed by Pa. involutus during the degradation of the organic matter was similar to the set of enzymes involved in the oxidative degradation of wood by brown-rot fungi. However, Pa. involutus lacked transcripts encoding extracellular...... mycorrhizal fungi. To capture the nitrogen, the fungi must at least partly disrupt the recalcitrant organic matterprotein complexes within which the nitrogen is embedded. This disruption process is poorly characterized. We used spectroscopic analyses and transcriptome profiling to examine the mechanism by...... which the ectomycorrhizal fungus Paxillus involutus degrades organic matter when acquiring nitrogen from plant litter. The fungus partially degraded polysaccharides and modified the structure of polyphenols. The observed chemical changes were consistent with a hydroxyl radical attack, involving Fenton...

  9. Enhancement of β-Glucosidase Activity from a Brown Rot Fungus Fomitopsis pinicola KCTC 6208 by Medium Optimization.

    Science.gov (United States)

    Park, Ah Reum; Park, Jeong-Hoon; Ahn, Hye-Jin; Jang, Ji Yeon; Yu, Byung Jo; Um, Byung-Hwan; Yoon, Jeong-Jun

    2015-03-01

    β-Glucosidase, which hydrolyzes cellobiose into two glucoses, plays an important role in the process of saccharification of the lignocellulosic biomass. In this study, we optimized the activity of β-glucosidase of brown-rot fungus Fomitopsis pinicola KCTC 6208 using the response surface methodology (RSM) with various concentrations of glucose, yeast extract and ascorbic acid, which are the most significant nutrients for activity of β-glucosidase. The highest activity of β-glucosidase was achieved 3.02% of glucose, 4.35% of yeast extract, and 7.41% ascorbic acid where ascorbic acid was most effective. The maximum activity of β-glucosidase predicted by the RSM was 15.34 U/mg, which was similar to the experimental value 14.90 U/mg at the 16th day of incubation. This optimized activity of β-glucosidase was 23.6 times higher than the preliminary activity value, 0.63 U/mg, and was also much higher than previous values reported in other fungi strains. Therefore, a simplified medium supplemented with a cheap vitamin source, such as ascorbic acid, could be a cost effective mean of increasing β-glucosidase activity. PMID:25892916

  10. Optimization of cellulase production by a brown rot fungus Fomitopsis sp. RCK2010 under solid state fermentation.

    Science.gov (United States)

    Deswal, Deepa; Khasa, Yogender Pal; Kuhad, Ramesh Chander

    2011-05-01

    Culture conditions for enhanced cellulase production from a newly isolated brown rot fungus, Fomitopsis sp. RCK2010 were optimized under solid state fermentation. An initial pH of 5.5 and moisture ratio of 1:3.5 (solid:liquid) were found to be optimal for maximum enzyme production. Of the different carbon sources tested wheat bran gave the maximum production of CMCase (71.526 IU/g), FPase (3.268 IU/g), and β-glucosidase (50.696 IU/g). Among the nitrogen sources, urea caused maximum production of CMCase (81.832 IU/g), where as casein and soyabean meal gave the highest FPase (4.682 IU/g) and β-glucosidase (69.083 IU/g) production, respectively. Among amino acids tested glutamic acid gave the highest production for CMCase (84.127I U/g); however 4-hydroxy-l-proline stimulated maximum FPase production (6.762 IU/g). Saccharification of pretreated rice straw and wheat straw by crude enzyme extract from Fomitopsis sp. RCK2010 resulted in release of 157.160 and 214.044 mg/g of reducing sugar, respectively. PMID:21470856

  11. Gene expression analysis of copper tolerance and wood decay in the brown rot fungus Fibroporia radiculosa.

    Science.gov (United States)

    Tang, Juliet D; Parker, Leslie A; Perkins, Andy D; Sonstegard, Tad S; Schroeder, Steven G; Nicholas, Darrel D; Diehl, Susan V

    2013-03-01

    High-throughput transcriptomics was used to identify Fibroporia radiculosa genes that were differentially regulated during colonization of wood treated with a copper-based preservative. The transcriptome was profiled at two time points while the fungus was growing on wood treated with micronized copper quat (MCQ). A total of 917 transcripts were differentially expressed. Fifty-eight of these genes were more highly expressed when the MCQ was protecting the wood from strength loss and had putative functions related to oxalate production/degradation, laccase activity, quinone biosynthesis, pectin degradation, ATP production, cytochrome P450 activity, signal transduction, and transcriptional regulation. Sixty-one genes were more highly expressed when the MCQ lost its effectiveness (>50% strength loss) and had functions related to oxalate degradation; cytochrome P450 activity; H(2)O(2) production and degradation; degradation of cellulose, hemicellulose, and pectin; hexose transport; membrane glycerophospholipid metabolism; and cell wall chemistry. Ten of these differentially regulated genes were quantified by reverse transcriptase PCR for a more in-depth study (4 time points on wood with or without MCQ treatment). Our results showed that MCQ induced higher than normal levels of expression for four genes (putative annotations for isocitrate lyase, glyoxylate dehydrogenase, laccase, and oxalate decarboxylase 1), while four other genes (putative annotations for oxalate decarboxylase 2, aryl alcohol oxidase, glycoside hydrolase 5, and glycoside hydrolase 10) were repressed. The significance of these results is that we have identified several genes that appear to be coregulated, with putative functions related to copper tolerance and/or wood decay. PMID:23263965

  12. Biomethanation of white rotted and brown rotted rice straw

    Energy Technology Data Exchange (ETDEWEB)

    Ghosh, A.; Bhattacharyya, B.C. [Chemical Engineeringg Dept., Biotechnology Unit, IIT Kharagpur, (India)

    1999-04-01

    Biomethanation of white rotted and brown rotted rice straw was taken for the present investigation and their efficiency on biomethanation has been tested. Rice straw was treated with white rot fungus Phanerochaete chrysosporium (P{sub C}) and brown rot fungus Polyporus ostreiformis (P{sub O}). Biogas and methane production was increased by about 34.73% and 46.19% in P{sub C}-treated straw and 21.12% and 31.94% in P{sub O}-treated straw respectively. VFA production has also been increased in P{sub C} and P{sub O} treated straw compared to control straw which were 76.73% and 30.69% respectively. Reduction of COD has also been found during biomethanation. The rate of reduction of COD during the initial period of digestion was 59.01%, 55.55% and 26.00% in P{sub C}-treated, P{sub O}-treated and control straw respectively after 21 days of digestion. (orig.) With 12 figs., 3 tabs., 14 refs.

  13. Serpula lacrymans, The Dry Rot Fungus and Tolerance Towards Copper-Based Wood Preservatives

    DEFF Research Database (Denmark)

    Hastrup, Anne Christine Steenkjær; Jensen, Bo; Clausen, Carol;

    2005-01-01

    brown-rot fungi is thought to be due in part to oxalic acid production and accumulation. Oxalic acid has been implicated in copper tolerance by the formation of copper oxalate crystals. Twelve isolates of the dry rot fungus, S. lacrymans and four other brown rot species were evaluated for weight loss on...

  14. First report of brown rot on apple fruit caused by Monilinia fructicola in the United States

    Science.gov (United States)

    Brown rot, caused by Monilinia fructicola (G. Wint.) Honey, is the most devastating disease of stone fruits in North America resulting in significant economic losses. The fungus has been recently reported to cause pre and postharvest brown rot on apple fruit in Germany, Italy, and Serbia. However, M...

  15. Micronized Copper Wood Preservatives: Efficacy of Ion, Nano, and Bulk Copper against the Brown Rot Fungus Rhodonia placenta.

    Directory of Open Access Journals (Sweden)

    Chiara Civardi

    Full Text Available Recently introduced micronized copper (MC formulations, consisting of a nanosized fraction of basic copper (Cu carbonate (CuCO3·Cu(OH2 nanoparticles (NPs, were introduced to the market for wood protection. Cu NPs may presumably be more effective against wood-destroying fungi than bulk or ionic Cu compounds. In particular, Cu- tolerant wood-destroying fungi may not recognize NPs, which may penetrate into fungal cell walls and membranes and exert their impact. The objective of this study was to assess if MC wood preservative formulations have a superior efficacy against Cu-tolerant wood-destroying fungi due to nano effects than conventional Cu biocides. After screening a range of wood-destroying fungi for their resistance to Cu, we investigated fungal growth of the Cu-tolerant fungus Rhodonia placenta in solid and liquid media and on wood treated with MC azole (MCA. In liquid cultures we evaluated the fungal response to ion, nano and bulk Cu distinguishing the ionic and particle effects by means of the Cu2+ chelator ammonium tetrathiomolybdate (TTM and measuring fungal biomass, oxalic acid production and laccase activity of R. placenta. Our results do not support the presence of particular nano effects of MCA against R. placenta that would account for an increased antifungal efficacy, but provide evidence that attribute the main effectiveness of MCA to azoles.

  16. Micronized Copper Wood Preservatives: Efficacy of Ion, Nano, and Bulk Copper against the Brown Rot Fungus Rhodonia placenta.

    Science.gov (United States)

    Civardi, Chiara; Schubert, Mark; Fey, Angelika; Wick, Peter; Schwarze, Francis W M R

    2015-01-01

    Recently introduced micronized copper (MC) formulations, consisting of a nanosized fraction of basic copper (Cu) carbonate (CuCO3·Cu(OH)2) nanoparticles (NPs), were introduced to the market for wood protection. Cu NPs may presumably be more effective against wood-destroying fungi than bulk or ionic Cu compounds. In particular, Cu- tolerant wood-destroying fungi may not recognize NPs, which may penetrate into fungal cell walls and membranes and exert their impact. The objective of this study was to assess if MC wood preservative formulations have a superior efficacy against Cu-tolerant wood-destroying fungi due to nano effects than conventional Cu biocides. After screening a range of wood-destroying fungi for their resistance to Cu, we investigated fungal growth of the Cu-tolerant fungus Rhodonia placenta in solid and liquid media and on wood treated with MC azole (MCA). In liquid cultures we evaluated the fungal response to ion, nano and bulk Cu distinguishing the ionic and particle effects by means of the Cu2+ chelator ammonium tetrathiomolybdate (TTM) and measuring fungal biomass, oxalic acid production and laccase activity of R. placenta. Our results do not support the presence of particular nano effects of MCA against R. placenta that would account for an increased antifungal efficacy, but provide evidence that attribute the main effectiveness of MCA to azoles. PMID:26554706

  17. Production and degradation of oxalic acid by brown rot fungi

    International Nuclear Information System (INIS)

    Our results show that all of the brown rot fungi tested produce oxalic acid in liquid as well as in semisolid cultures. Gloeophyllum trabeum, which accumulates the lowest amount of oxalic acid during decay of pine holocellulose, showed the highest polysaccharide-depolymerizing activity. Semisolid cultures inoculated with this fungus rapidly converted 14C-labeled oxalic acid to CO2 during cellulose depolymerization. The other brown rot fungi also oxidized 14C-labeled oxalic acid, although less rapidly. In contrast, semisolid cultures inoculated with the white rot fungus Coriolus versicolor did not significantly catabolize the acid and did not depolymerize the holocellulose during decay. Semisolid cultures of G. trabeum amended with desferrioxamine, a specific iron-chelating agent, were unable to lower the degree of polymerization of cellulose or to oxidize 14C-labeled oxalic acid to the extent or at the rate that control cultures did. These results suggest that both iron and oxalic acid are involved in cellulose depolymerization by brown rot fungi

  18. Hendersonia Creberrima, the cause of soft brown rot of mango in South Africa

    International Nuclear Information System (INIS)

    A soft brown rot of mangoes in South Africa, is especially severe in export fruit kept in cold storage for prolonged periods. At present mangoes can be exported most economically by sea. This involves storage at 110C for approximately 21 days. Unfortunately, these appear to be ideal conditions for the development of soft brown rot. Losses as high as 80% were recorded. The South African fungus agrees in morphology and cultural characters with Hendersonia Creberrima

  19. Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR

    Energy Technology Data Exchange (ETDEWEB)

    D`Souza, T.M.; Boominathan, K.; Reddy, C.A. [Michigan State Univ., East Lansing, MI (United States)

    1996-10-01

    Degenerate primers corresponding to the consensus sequences of the copper-binding regions in the N-terminal domains of known basidiomycete laccases were used to isolate laccase gene-specific sequences from strains representing nine genera of wood rot fungi. All except three gave the expected PCR product of about 200 bp. Computer searches of the databases identified the sequences of each of the PCR product of about 200 bp. Computer searches of the databases identified the sequence of each of the PCR products analyzed as a laccase gene sequence, suggesting the specificity of the primers. PCR products of the white rot fungi Ganoderma lucidum, Phlebia brevispora, and Trametes versicolor showed 65 to 74% nucleotide sequence similarity to each other; the similarity in deduced amino acid sequences was 83 to 91%. The PCR products of Lentinula edodes and Lentinus tigrinus, on the other hand, showed relatively low nucleotide and amino acid similarities (58 to 64 and 62 to 81%, respectively); however, these similarities were still much higher than when compared with the corresponding regions in the laccases of the ascomycete fungi Aspergillus nidulans and Neurospora crassa. A few of the white rot fungi, as well as Gloeophyllum trabeum, a brown rot fungus, gave a 144-bp PCR fragment which had a nucleotide sequence similarity of 60 to 71%. Demonstration of laccase activity in G. trabeum and several other brown rot fungi was of particular interest because these organisms were not previously shown to produce laccases. 36 refs., 6 figs., 2 tabs.

  20. Brown rot on nuts of Castanea sativa Mill: an emerging disease and its causal agent

    Directory of Open Access Journals (Sweden)

    Maresi G

    2013-07-01

    Full Text Available The quality and quantity of nut production are fundamental to the economic viability of chestnut cultivation, yet recent reports indicate that severe damage due to moulds represents a significant problem for growers. We carried out an investigation of the agents of chestnut rot and internal fruit damage in three orchards in Italy. Black and brown rot, as well as insect damage, were found in all the areas examined. Brown rot appeared to be the main cause of damage, affecting 8% to 49% and 2% to 24% of nuts collected from the ground and from burrs, respectively. With respect to morphology and DNA sequencing analyses, fungal isolates obtained from brown rot were homologous with Gnomoniopsis sp. obtained from Dryocosmus kuriphilus (Yasumatsu galls and with Gnomoniopsis castanea and Gnomoniopsis smithogilvyi described on chestnut in Italy and Australia, respectively. The same fungus was also isolated from the bark of one- and two-years-old healthy shoots at each site, supporting the endophytic behaviour of this rot agent. Brown rot symptoms on nuts associated with Gnomoniopsis sp. corresponded with those previously described by several authors and referred to as Phoma or Phomopsis endogena, suggesting a relationship between these fungi and Gnomoniopsis sp. It is to notice that the escalation of brown rot damage in Italy followed several periods of drought and probably the recent invasion of D. kuriphilus, both stress factors for chestnut trees.

  1. Efficiency of fungicides in the control of brown rot in peaches and its relationship with physiological parameters of the fruits

    OpenAIRE

    Elizandra Pivotto Pavanello; Auri Brackmann; Fabio Rodrigo Thewes; Vanderlei Both; Jorge Roque Alves dos Santos; Marcio Renan Weber Schorr

    2015-01-01

    The brown rot, caused by the fungus Monilinia fructicola, is the main cause for losses in pre and postharvest of peaches. The study aimed to evaluate the efficiency of preharvest application of fungicides on the control of brown rot in the field and during cold storage, and its relation to parameters of maturation and fruit quality. Therefore, we evaluated the following active ingredients: [1] control (water application), [2] captan; [3] iprodione; [4] iminoctadine; [5] tebuconazole; [6] proc...

  2. Genetic Differentiation and Spatial Structure of Phellinus noxius, the Causal Agent of Brown Root Rot of Woody Plants in Japan

    OpenAIRE

    Akiba, Mitsuteru; Ota, Yuko; Tsai, Isheng J.; Hattori, Tsutomu; Sahashi, Norio; Kikuchi, Taisei

    2015-01-01

    Phellinus noxius is a pathogenic fungus that causes brown root rot disease in a variety of tree species. This fungus is distributed in tropical and sub-tropical regions of Southeast and East Asia, Oceania, Australia, Central America and Africa. In Japan, it was first discovered on Ishigaki Island in Okinawa Prefecture in 1988; since then, it has been found on several of the Ryukyu Islands. Recently, this fungus was identified from the Ogasawara (Bonin) Islands, where it has killed trees, incl...

  3. Production of some extracellular enzymes by a lignin peroxidase-producing brown rot fungus, Polyporus ostreiformis, and its comparative abilities for lignin degradation and dye decolorization.

    OpenAIRE

    Dey, S.; Maiti, T K; Bhattacharyya, B C

    1994-01-01

    Polyporus ostreiformis produced Mn peroxidase, acid protease, alpha-amylase, and lignin peroxidase, with maximum activities of 40, 8,300, and 4,200 U liter-1 and 50 nkat liter-1, respectively, in nitrogen-limited liquid media. The fungus removed only 18.6% lignin from rice straw in 3 weeks but effected 99% decolorization of Congo red dye in 9 days.

  4. Phenolic Compound Utilization by the Soft Rot Fungus Lecythophora hoffmannii

    OpenAIRE

    Bugos, Robert C.; Sutherland, John B.; Adler, John H.

    1988-01-01

    Nine phenolic compounds were metabolized by the soft rot fungus Lecythophora hoffmannii via protocatechuic acid and subsequently cleaved by protocatechuate 3,4-dioxygenase as determined by oxygen uptake, substrate depletion, and ring cleavage analysis. Catechol was metabolized by catechol 1,2-dioxygenase. Fungal utilization of these aromatic compounds may be important in the metabolism of wood decay products.

  5. OXIDATION OF PERSISTANT ENVIRONMENTAL POLLUTANTS BY A WHITE ROT FUNGUS

    Science.gov (United States)

    The white rot fungus Phanerochaete chrysosporium degraded DDT [1,1,-bis(4-chlorophenyl)-2,2,2-trichloroethane], 3,4,3',4'-tetrachlorobiphenyl, 2,4,5,2',-4',5'-hexachlorobiphenyl, 2,3,7,8-tetrachlorodibenzo-p-dioxin, lindane (1,2,3,4,5,6-hexachlorocylohexane), and benzo[a]pyrene t...

  6. Efficiency of fungicides in the control of brown rot in peaches and its relationship with physiological parameters of the fruits

    Directory of Open Access Journals (Sweden)

    Elizandra Pivotto Pavanello

    2015-02-01

    Full Text Available The brown rot, caused by the fungus Monilinia fructicola, is the main cause for losses in pre and postharvest of peaches. The study aimed to evaluate the efficiency of preharvest application of fungicides on the control of brown rot in the field and during cold storage, and its relation to parameters of maturation and fruit quality. Therefore, we evaluated the following active ingredients: [1] control (water application, [2] captan; [3] iprodione; [4] iminoctadine; [5] tebuconazole; [6] procymidone; [7 ] azoxystrobin; [8] difenoconazole; [9] azoxystrobin / difenoconazole; [10] trifloxystrobin / tebuconazole; [11] sequence iminoctadine + captan; [12] sequence iminoctadine + iprodione; [13] sequence of tebuconazole + captan; [14] sequence of tebuconazole + iprodione. All treatments were applied according recommended doses and grace period for culture. The fruits were evaluated at harvest and after 40 days storage at –0.5 ° C, plus six days at 20 º C. At harvest time, the best control of brown rot was obtained with difenoconazole, while the fungicide iminoctadine and its association with iprodione showed good results in controlling brown rot after 40 days of cold storage, plus six days shelf life at 20 º C. The preharvest application of captan cause skin browning. The fungicide azoxystrobin influences the fruit maturation by decreasing acidity and firmness at harvest. Good levels of control of brown rot of peach can be achieved with the use of iminoctadine and iprodione.

  7. Using a grass substrate to compare decay among two clades of brown rot fungi.

    Science.gov (United States)

    Kaffenberger, Justin T; Schilling, Jonathan S

    2013-10-01

    Interest in the mechanisms of wood-degrading fungi has grown in tandem with lignocellulose bioconversion efforts, yet many potential biomass feedstocks are non-woody. Using corn stover (Zea mays) as a substrate, we tracked degradative capacities among brown rot fungi from the Antrodia clade, including Postia placenta, the first brown rot fungus to have its genome sequenced. Decay dynamics were compared against Gloeophyllum trabeum from the Gloeophyllum clade. Weight loss induced by P. placenta (6.2 %) and five other Antrodia clade isolates (average 7.4 %) on corn stalk after 12 weeks demonstrated inefficiency among these fungi, relative to decay induced by G. trabeum (44.4 %). Using aspen (Populus sp.) as a woody substrate resulted in, on average, a fourfold increase in weight loss induced by Antrodia clade fungi, while G. trabeum results matched those on stover. The sequence and trajectories of chemical constituent losses differed as a function of substrate but not fungal clade. Instead, chemical data suggest that characters unique to stover limit decay by the Antrodia clade, rather than disparities in growth rate or extractives toxicity. High p-coumaryl lignin content, lacking the methoxy groups characteristically cleaved during brown rot, is among potential rate-distinguishing characters in grasses. This ineptitude among Antrodia clade fungi on grasses was supported by meta-analysis of other unrelated studies using grass substrates. Concerning application, results expose a problem if adopting the strategy of the model decay fungus P. placenta to treat corn stover, a widely available plant feedstock. Overall, the results insinuate phylogenetically distinct modes of brown rot and demonstrate the benefit of using non-woody substrates to probe wood degradation mechanisms. PMID:23917637

  8. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white rot/brown rot paradigm for wood decay fungi

    Science.gov (United States)

    Basidiomycota (basidiomycetes) make up 32% of the described fungi and include most wood decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade ...

  9. Peaches tree genetic divergence for brown rot reaction

    OpenAIRE

    Américo Wagner Júnior; Keli Cristina Fabiane; Jéssica Scarlet Marth Alves de Oliveira; Juliano Zanela; Idemir Citadin

    2011-01-01

    It was evaluated the genetic divergence in peach genotypes for brown rot reaction. It was evaluated 26 and 29 peach genotypes in the 2009/2010 and 2010/2011 production cycle, respectively. The experiment was carried out at the Laboratório de Fitossanidade, da UTFPR - Campus Dois Vizinhos. The experimental design was entirely randomized, considering each peach genotype a treatment, and it was use three replication of nine fruits. The treatment control use three replication of three peach. The ...

  10. Eradicant and curative treatments of hexanal against peach brown rot

    Directory of Open Access Journals (Sweden)

    Juliana Silveira Baggio

    2014-02-01

    Full Text Available Brown rot, caused by Monilinia spp. , is one of the most important peach (Prunuspersica (L. Batsch diseases and the main cause of postharvest losses. Currently, alternative methods for postharvest disease control, such as the use of volatiles, are under investigation. The objective of this study was to determine the effects of hexanal on the in vitro development of Monilinia fructicola and M. laxa and on monocyclic components of brown rot on peaches. To evaluate the effect on pathogen development in vitro, a single dose of 215 µL of liquid hexanal was placed on glass jars in closed plastic containers (4.3 L at the moment of fungi transfer, 24 or 48 h after transferring to Petri dishes. After hexanal application, the Petri dishes were kept inside the containers that were closed for 24 h at 20 ºC. Mycelial growth was measured seven days after hexanal removal. For in vivo assays, inoculated fruits were kept in closed plastic containers, and hexanal was applied at the moment of fruit inoculation or 24 hours thereafter. The monocyclic components infection frequency, expressed as brown rot incidence, lesion diameter and lesion sporulation, were assessed daily for seven days. Overall, hexanal was more effective in inhibiting mycelial growth when applied at the moment of pathogen transfer. Hexanal did not prevent pathogen infection, but reduced lesion diameter and completely inhibited spore production on the fruit for both treatments. Hexanal provides a promising alternative for chemical control and can be used in postharvest handling systems.

  11. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi.

    Science.gov (United States)

    Riley, Robert; Salamov, Asaf A; Brown, Daren W; Nagy, Laszlo G; Floudas, Dimitrios; Held, Benjamin W; Levasseur, Anthony; Lombard, Vincent; Morin, Emmanuelle; Otillar, Robert; Lindquist, Erika A; Sun, Hui; LaButti, Kurt M; Schmutz, Jeremy; Jabbour, Dina; Luo, Hong; Baker, Scott E; Pisabarro, Antonio G; Walton, Jonathan D; Blanchette, Robert A; Henrissat, Bernard; Martin, Francis; Cullen, Dan; Hibbett, David S; Grigoriev, Igor V

    2014-07-01

    Basidiomycota (basidiomycetes) make up 32% of the described fungi and include most wood-decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade lignin along with cellulose and hemicellulose. Prior genomic comparisons suggested that the two decay modes can be distinguished based on the presence or absence of ligninolytic class II peroxidases (PODs), as well as the abundance of enzymes acting directly on crystalline cellulose (reduced in brown rot). To assess the generality of the white-rot/brown-rot classification paradigm, we compared the genomes of 33 basidiomycetes, including four newly sequenced wood decayers, and performed phylogenetically informed principal-components analysis (PCA) of a broad range of gene families encoding plant biomass-degrading enzymes. The newly sequenced Botryobasidium botryosum and Jaapia argillacea genomes lack PODs but possess diverse enzymes acting on crystalline cellulose, and they group close to the model white-rot species Phanerochaete chrysosporium in the PCA. Furthermore, laboratory assays showed that both B. botryosum and J. argillacea can degrade all polymeric components of woody plant cell walls, a characteristic of white rot. We also found expansions in reducing polyketide synthase genes specific to the brown-rot fungi. Our results suggest a continuum rather than a dichotomy between the white-rot and brown-rot modes of wood decay. A more nuanced categorization of rot types is needed, based on an improved understanding of the genomics and biochemistry of wood decay. PMID:24958869

  12. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white rot/ brown rot paradigm for wood decay fungi

    Energy Technology Data Exchange (ETDEWEB)

    Riley, Robert; Salamov, Asaf; Brown, Daren W.; Nagy, Laszlo G.; Floudas, Dimitris; Held, Benjamin; Levasseur, Anthony; Lombard, Vincent; Morin, Emmanuelle; Otillar, Robert; Lindquist, Erika; Sun, Hui; LaButti, Kurt; Schmutz, Jeremy; Jabbour, Dina; Luo, Hong; Baker, Scott E.; Pisabarro, Antonio; Walton, Jonathan D.; Blanchette, Robert; Henrissat, Bernard; Martin, Francis; Cullen, Dan; Hibbett, David; Grigoriev, Igor V.

    2014-03-14

    Basidiomycota (basidiomycetes) make up 32percent of the described fungi and include most wood decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade lignin along with cellulose and hemicellulose. Prior genomic comparisons suggested that the two decay modes can be distinguished based on the presence or absence of ligninolytic class II peroxidases (PODs), as well as the abundance of enzymes acting directly on crystalline cellulose (reduced in brown rot). To assess the generality of the white rot/brown rot classification paradigm we compared the genomes of 33 basidiomycetes, including four newly sequenced wood decayers, and performed phylogenetically-informed Principal Components Analysis (PCA) of a broad range of gene families encoding plant biomass-degrading enzymes. The newly sequenced Botryobasidium botryosum and Jaapia argillacea genomes lack PODs, but possess diverse enzymes acting on crystalline cellulose, and they group close to the model white rot species Phanerochaete chrysosporium in the PCA. Furthermore, laboratory assays showed that both B. botryosum and J. argillacea can degrade all polymeric components of woody plant cell walls, a characteristic of white rot. We also found expansions in reducing polyketide synthase genes specific to the brown rot fungi. Our results suggest a continuum rather than a dichotomy between the white rot and brown rot modes of wood decay. A more nuanced categorization of rot types is needed, based on an improved understanding of the genomics and biochemistry of wood decay.

  13. Biodegradation of hazardous waste using white rot fungus: Project planning and concept development document

    International Nuclear Information System (INIS)

    The white rot fungus Phanerochaete chrysosporium has been shown to effectively degrade pollutants such as trichlorophenol, polychlorinated biphenyls (PCBs), dioxins and other halogenated aromatic compounds. These refractory organic compounds and many others have been identified in the tank waste, groundwater and soil of various US Department of Energy (DOE) sites. The treatment of these refractory organic compounds has been identified as a high priority for DOE's Research, Development, Demonstration, Testing, and Evaluation (RDDT ampersand E) waste treatment programs. Unlike many bacteria, the white rot fungus P. chrysosporium is capable of degrading these types of refractory organics and may be valuable for the treatment of wastes containing multiple pollutants. The objectives of this project are to identify DOE waste problems amenable to white rot fungus treatment and to develop and demonstrate white rot fungus treatment process for these hazardous organic compounds. 32 refs., 6 figs., 7 tabs

  14. Polycyclic aromatic hydrocarbon degradation by the white rot fungus Bjerkandera sp. strain BOS55.

    OpenAIRE

    Kotterman, M.J.J.

    1998-01-01

    Outline of this thesisIn this thesis the conditions for optimal PAH oxidation by the white rot fungus Bjerkandera sp. strain BOS55 were evaluated. In Chapter 2, culture conditions like aeration and cosubstrate concentrations, which influenced the oxidation of the PAH compound anthracene and the ligninolytic indicator dye Poly R-478 by the white rot fungus, were studied. Two parameters were identified as the most important PAH oxidation rate-limiting factors: the hydrogen peroxide production r...

  15. Evaluation of the bioremediation ability of the isolated white rot fungus on the textile effluents

    OpenAIRE

    Indira Priyadarsini* R; V Bhuvaneswari; K. Suresh Kumar

    2012-01-01

    Every one contributes to the environmental pollution by theiractivities either directly or indirectly and it is our moral responsibility to uncover a solution in order to come out of it also. Hence an attempt was made to isolate a white rot fungus with better remediation ability. The white rot fungus was isolated from decay wood sample and identified as Trametes hirsuta by molecular identification methods. The assessment of the bioremediation ability of the isolated organism was done with fou...

  16. Temporal changes in wood crystalline cellulose during degradation by brown rot fungi

    DEFF Research Database (Denmark)

    Howell, Caitlin; Hastrup, Anne Christine Steenkjær; Goodell, Barry;

    2009-01-01

    The degradation of wood by brown rot fungi has been studied intensely for many years in order to facilitate the preservation of in-service wood. In this work we used X-ray diffraction to examine changes in wood cellulose crystallinity caused by the brown rot fungi Gloeophyllum trabeum, Coniophora...

  17. BIODEGRADATION OF ENVIRONMENTAL POLLUTANTS BY THE WHITE ROT FUNGUS PHANEROCHAETE CHRYSOPORIUM: INVOLVEMENT OF THE LIGNIN DEGRADING SYSTEM

    Science.gov (United States)

    The white-rot fungus Phanrochaete chrysosporium has the ability to degrade a wide variety of structurally diverse organic compounds, including a number of environmentally persistent organopollutants. The unique biodegradative abilities of this fungus appears to be depend...

  18. BIODEGRADATION OF ENVIRONMENTAL POLLUTANTS BY THE WHITE ROT FUNGUS PHANEROCHATETE CHRYSOSPORIUM: INVOLVEMENT OF THE LIGNIN DEGRADING SYSTEM

    Science.gov (United States)

    The white-rot fungus Phanerochaete chrysosporium has the ability to degrade's wide variety of structurally diverse organic compounds, including a number of environmentall3 persistent organopollutants. he unique biodegradative abilities of this fungus appears to be dependent upon ...

  19. Monilinia species causing brown rot of peach in China.

    Directory of Open Access Journals (Sweden)

    Meng-Jun Hu

    Full Text Available In this study, 145 peaches and nectarines displaying typical brown rot symptoms were collected from multiple provinces in China. A subsample of 26 single-spore isolates were characterized phylogenetically and morphologically to ascertain species. Phylogenetic analysis of internal transcribed spacer (ITS regions 1 and 2, glyceraldehyde-3-phosphate dehydrogenase (G3PDH, β-tubulin (TUB2 revealed the presence of three distinct Monilinia species. These species included Monilinia fructicola, Monilia mumecola, and a previously undescribed species designated Monilia yunnanensis sp. nov. While M. fructicola is a well-documented pathogen of Prunus persica in China, M. mumecola had primarily only been isolated from mume fruit in Japan. Koch's postulates for M. mumecola and M. yunnanensis were fulfilled confirming pathogenicity of the two species on peach. Phylogenetic analysis of ITS, G3PDH, and TUB2 sequences indicated that M. yunnanensis is most closely related to M. fructigena, a species widely prevalent in Europe. Interestingly, there were considerable differences in the exon/intron structure of the cytochrome b (Cyt b gene between the two species. Morphological characteristics, including spore size, colony morphology, lesion growth rate, and sporulation, support the phylogenetic evidence suggesting the designation of M. yunnanensis as a new species. A new multiplex PCR method was developed to facilitate the detection of M. yunnanensis and differentiation of Monilinia spp. causing brown rot of peach in China.

  20. Peaches tree genetic divergence for brown rot reaction

    Directory of Open Access Journals (Sweden)

    Américo Wagner Júnior

    2011-10-01

    Full Text Available It was evaluated the genetic divergence in peach genotypes for brown rot reaction. It was evaluated 26 and 29 peach genotypes in the 2009/2010 and 2010/2011 production cycle, respectively. The experiment was carried out at the Laboratório de Fitossanidade, da UTFPR - Campus Dois Vizinhos. The experimental design was entirely randomized, considering each peach genotype a treatment, and it was use three replication of nine fruits. The treatment control use three replication of three peach. The fruit epidermis were inoculated individually with 0.15 mL of M. fructicola conidial suspension (1.0 x 10(5 spores mL-1. In the control treatment was sprayed with 0.15 mL of distilled water. The fruits were examined 72 and 120 hours after inoculation, and the incidence and severity disease were evaluated. These results allowed realized study for genetic divergence, used as dissimilarity measure the Generalized Mahalanobis distance. Cluster analysis using Tocher´s optimization method and distances in the plan were applied. There was smallest genetic divergence among peach trees evaluated for brown rot, what can difficult to obtain resistance in the genotypes.

  1. [Kinetics model for batch culture of white rot fungus].

    Science.gov (United States)

    Xiong, Xiao-ping; Wen, Xiang-hua; Xu, Kang-ning; Bian, Bing-hui

    2008-02-01

    In order to understand ligninolytic enzymes production process during culture of white rot fungus, accordingly to direct the design of fermentation process, a kinetics model was built for the batch culture of Phanerochaete chrysosporium. The parameters in the model were calibrated based on the experimental data from free and immobilized culture separately. The difference between each variable's values calculated based on kinetics model and experimental data is within 15%. Comparing parameters for the free and the immobilized culture, it is found that maximum biomass concentrations are both 1.78 g/L; growth rate ratio of immobilized culture (0.6683 d(-1)) is larger than that of free culture (0.5144 d(-1)); very little glucose is consumed for biomass growth in free culture while in immobilized culture much glucose is used and ammonium nitrogen is consumed at a greater rate. Ligninolytic enzymes production process is non-growth related; fungal pellets can produce MnP (231 U/L) in free culture with a production rate of 115.8 U x (g x d)(-1) before peak and 26.1 U x (g x d)(-1) after peak, thus fed-batch is a possible mode to improve MnP production and fermentation efficiency. MnP (410 U/L) and LiP (721 U/L) can be produced in immobilized culture, but MnP and LiP production rate decrease from 80.1 U x (g x d)(-1) and 248.9 U x (g x d)(-1) to 6.04 U x (g x d)(-1) and 0 U x (g x d)(-1), respectively, indicating a proper feed moment is before the enzymes peak during fed-batch culture. PMID:18613526

  2. Toxicity of graphene oxide to white rot fungus Phanerochaete chrysosporium.

    Science.gov (United States)

    Xie, Jingru; Ming, Zhu; Li, Hongliang; Yang, Hua; Yu, Baowei; Wu, Ruihan; Liu, Xiaoyang; Bai, Yitong; Yang, Sheng-Tao

    2016-05-01

    With the wide production and applications of graphene and its derivatives, their toxicity to the environment has received much attention nowadays. In this study, we investigated the toxicity of graphene oxide (GO) to white rot fungus (Phanerochaete chrysosporium). GO was prepared by modified Hummers method and well characterized before use. P. chrysosporium was exposed to GO at the concentrations of 0-4 mg/mL for 7 d. The fresh and dry weights, pH values of culture media, structures, ultrastructures, IR spectra and activities of the decomposition of pollutants were measured to reveal the hazards of GO to P. chrysosporium. Our results indicated that low concentrations of GO stimulated the growth of P. chrysosporium. The exposure to GO induced more acidic pH values of the culture media after 7 d. GO induced the disruption of the fiber structure of P. chrysosporium, while at 4 mg/mL some very long and thick fibers were formed. Such changes were reflected in the scanning electron microscopy investigations, where the disruption of fibers was observed. In the ultrastructural investigations, the shape of P. chrysosporium cells changed and more vesicles were found upon the exposure to GO. The infrared spectroscopy analyses suggested that the chemical compositions of mycelia were not changed qualitatively. Beyond the toxicity, GO did not alter the activities of P. chrysosporium at low concentrations, but led to the complete loss of activity at high concentrations. The implication to the ecological safety of graphene is discussed. PMID:26950023

  3. Evaluation of the bioremediation ability of the isolated white rot fungus on the textile effluents

    Directory of Open Access Journals (Sweden)

    Indira Priyadarsini* R

    2012-08-01

    Full Text Available Every one contributes to the environmental pollution by theiractivities either directly or indirectly and it is our moral responsibility to uncover a solution in order to come out of it also. Hence an attempt was made to isolate a white rot fungus with better remediation ability. The white rot fungus was isolated from decay wood sample and identified as Trametes hirsuta by molecular identification methods. The assessment of the bioremediation ability of the isolated organism was done with four textile effluent samples and the physico-chemical parameters namely colour, pH, TSS, TDS, COD, BOD, Total Hardness, level of Calcium, Magnesium, Chloride and Sulphate were evaluated. The change in the initial pH values of the four textile effluents after treatment with the isolated organism was not significant. All the other parameters were found to be reduced from their respective initial level after treatment with the isolated white rot fungus.

  4. Control of Ralstonia Solanacearum The Causal Agent of Brown Rot in Potato Using Essential Oils

    International Nuclear Information System (INIS)

    Five essential oils, namely peppermint (Mentha piperita L.), caraway (Carium carvum L.), fennel (Foeniculum vulgare Mill.), lemongrass (Cymbopogon citratus Staph.) and thyme (Thymus vulgaris), were used separately against Ralstonia solanacearum; the causal agent of brown rot in potato. The most two effective oils (peppermint and thyme) were used in vitro and in vivo after testing their effects on potato tubers buds germination. Peppermint inhibited buds germination but thyme have no effects on buds germination. In vivo, the control of brown rot using thyme oil in glass house experiment reduced the percentage of brown rot infection to 30.6% and reduced the severity of disease from 5 to 3.

  5. QTLs for Resistance to Major Rice Diseases Exacerbated by Global Warming: Brown Spot, Bacterial Seedling Rot, and Bacterial Grain Rot.

    Science.gov (United States)

    Mizobuchi, Ritsuko; Fukuoka, Shuichi; Tsushima, Seiya; Yano, Masahiro; Sato, Hiroyuki

    2016-12-01

    In rice (Oryza sativa L.), damage from diseases such as brown spot, caused by Bipolaris oryzae, and bacterial seedling rot and bacterial grain rot, caused by Burkholderia glumae, has increased under global warming because the optimal temperature ranges for growth of these pathogens are relatively high (around 30 °C). Therefore, the need for cultivars carrying genes for resistance to these diseases is increasing to ensure sustainable rice production. In contrast to the situation for other important rice diseases such as blast and bacterial blight, no genes for complete resistance to brown spot, bacterial seedling rot or bacterial grain rot have yet been discovered. Thus, rice breeders have to use partial resistance, which is largely influenced by environmental conditions. Recent progress in molecular genetics and improvement of evaluation methods for disease resistance have facilitated detection of quantitative trait loci (QTLs) associated with resistance. In this review, we summarize the results of worldwide screening for cultivars with resistance to brown spot, bacterial seedling rot and bacterial grain rot and we discuss the identification of QTLs conferring resistance to these diseases in order to provide useful information for rice breeding programs. PMID:27178300

  6. Ketahanan Komposit Kayu Plastik Polistirena terhadap Serangan Jamur Pelapuk Coklat Tyromyces palustris (Decay Resistance of Wood Polymer Composite (WPC Against Brown Rot Fungi Tyromyces palustris

    Directory of Open Access Journals (Sweden)

    I.G.K. Tapa Darma

    2011-01-01

    Full Text Available Wood specimens, 50 x 25 x 15 mm were impregnated in styrene and vinil acetate solutions at four concentration levels, using tertbutyl hydroperoxide as acatalyst. The specimens were dried at 60OC for 48 hours after which the solution was polymerized in situ. All specimens, including untreated specimens as control and specimens impregnated with Impralit CKB, were exposed to monoculture a brown rot fungus Tyromyces palustris, a brown rot fungus for 3 months. All wood polymer composite (WPC specimens obviously showed higher resistance compared with the control. At four concentration levels, WPC of tusam showed excellent result with weight loss value less than specimens treated with Impralit CKB. WPC of karet (Hevea brasiliensis Muell. Arg and sengon (Paraserianthes falcataria showed good resistance at high styrene concentration level.

  7. Decolorization of reactive brilliant red K-2BP by white rot fungus under sterile and non-sterile conditions

    Institute of Scientific and Technical Information of China (English)

    GAO Da-wen; WEN Xiang-hua; QIAN Yi

    2006-01-01

    Almost all the studies both domestic and international using white rot fungus for dye wastewater treatment are performed under sterile conditions. However, it is obviously unpractical that wastewater with dyes is treated under sterile conditions. A feasible study was made for using white rot fungus Phanerochaete chrysosporium to degrade reactive brilliant red K-2BP dye under non-sterile conditions. The results showed that there was no decolorizing effect under non-sterile condition if white rot fungus was incubated under non-sterile condition, and the decolorization was always near to 0% during decolorizing test for 3 d; in the meantime, a lot of yeast funguses were found in liquid medium when white rot fungus was incubated under non-sterile conditions; however, if white rot fungus was incubated under sterile condition firstly, its decolorization was above 90% under non-sterile condition, which was similar to that of sterile condition. So we point out that the treating process for wastewater with dyes should be divided into two stages. The first stage is that white rot fungus should be incubated under sterile conditions, and the second stage is that reactive brilliant red K-2BP is decolorized under non-sterile conditions. The method not only save the operation cost which decolorizing reactive brilliant red K-2BP under sterile condition, but also provide the feasibility for using white rot fungus to degrade wastewater with dyes under non-sterile conditions.

  8. Anatomical changes in Willow Wood Decayed by the brown rot fungus Coriolellus malicola (Basidiomycota Modificaciones anatómicas en madera de sauce por acción Coriolellus malicola (Aphyllophorales agente de pudrición castaña

    Directory of Open Access Journals (Sweden)

    Mónica A. Murace

    2006-12-01

    Full Text Available In Argentina, Salix wood is employed mainly in pulp and paper industry. In this country, the brown rotter C oriolellus malicola was found in association with willow plantations. The purpose of this work was to study the anatomical changes caused by C. malicola in willow wood in order to provide information on the effects of brown rot decay in the yield and quality of pulp. Two willow clones were employed: Salix nigra 4 and Salix babylonica x Salix alba cv I 131-25 . Two exposure times were used: 75 and 150 days. The percentages of weight loss produced by this fungus in both clones was ca. 30% at 75 days and ca. 60% at 150 days of decay. C. malicola degraded mainly fibre walls. Microscopically, the loss of cell shape, the presence of transwall fractures and the loss of birefringence were the main anatomical modifications observed. According to our observations decayed Salix wood by C. malicola seems to be inadequate for pulp industry.En la República Argentina la madera de Salix es empleada principalmente en la industria papelera. En este país el hongo de pudrición castaña C oriolellus malicola se encontró asociado a plantaciones comerciales de sauce. El objetivo de este trabajo fue estudiar las modificaciones anatómicas causada por C. malicola en la madera de sauce con el fin de aportar información sobre los efectos de la pudrición castaña en los rendimientos y calidad de la pulpa para papel. Se emplearon dos clones: Salix nigra 4 y Salix babylonica x Salix alba cv I. 131-25 . Se trabajó con dos tiempos de exposición: 75 y 150 días. Las pérdidas de peso producidas por esta cepa en ambos clones fueron de ca. del 30% a los 75 días y de ca. del 60% a los 150 días de incubación. C. malicola degradó principalmente las paredes de las fibras. Microscópicamente, las principales modificaciones anatómicas observadas fueron: deformación del tejido, presencia de fracturas transversales en las paredes celulares y pérdida de

  9. Yeasts associated with plums and their potential for controlling brown rot after harvest.

    Science.gov (United States)

    Janisiewicz, Wojciech J; Jurick, Wayne M; Peter, Kari A; Kurtzman, Cletus P; Buyer, Jeffrey S

    2014-06-01

    Bacterial and yeast antagonists isolated from fruit surfaces have been effective in controlling various post-harvest diseases, and several microbial antagonists have been developed into commercial products. Our knowledge of the fruit microbial community, with the exception of grapes, apples and some citrus fruit, is rudimentary and the potential of the resident yeasts for biocontrol remains largely unknown. We determined the occurrence of yeasts on plum surfaces during fruit development from the pre-hardening stage until harvest for 2 years. A total of 16 species from 13 genera were isolated. Species from three genera, basidiomycetes Rhodotorula (29.5%) and Sporidiobolus (24.7%) and the dimorphic ascomycete genus Aureobasidium (24.7%), constituted 78.7% of all isolations and were recovered throughout fruit development, while Cryptococcus spp. constituted only 6.2% of the total plum isolates. The yeast community in the final sampling was significantly different from the first three samplings, reflecting a rapidly changing fruit habitat during the maturation of fruit. For example, Hanseniaspora, Pichia, Zygosaccharomyces and Wickerhamomyces occurred only on the most mature fruit. Screening of the yeasts for antagonistic activity against Monilinia fructicola, a fungus that causes brown rot, revealed a range of biocontrol activities. Several isolates provided complete control of the decay on plums, challenged with a pathogen suspension of 10(3) conidia/ml and > 90% of control on fruit inoculated with the pathogen at a concentration 10 times higher. Some of the best antagonists included A. pullulans and R. phylloplana. Populations of both of these antagonists increased rapidly by several orders of magnitude in wounds of plums incubated at 24ºC and 4ºC. Our results indicate that plum surfaces harbour several yeast species, with excellent potential for use in biological control of brown rot of stone fruits. PMID:24687564

  10. Potato brown rot incidence and severity under different management and amendment regimes in different soil types

    OpenAIRE

    Messiha, N.A.S.; Bruggen, van, C.; Diepeningen, van, A.D.; Vos; Termorshuizen, A.J.; Tjou-Tam-Sin, N.N.A.; Janse, J.D.

    2007-01-01

    Ralstonia solanacearum race 3 biovar 2, the causative agent of potato brown rot (bacterial wilt), is an economically important disease in tropical, subtropical and temperate regions of the world. In view of previous reports on suppression of the disease by organic amendments, and the expansion of organic agriculture, it was timely to compare the effects of organic and conventional management and various amendments on brown rot development in different soils (type: sand or clay; origin: Egypt ...

  11. The Genetic Structure of Phellinus noxius and Dissemination Pattern of Brown Root Rot Disease in Taiwan

    OpenAIRE

    Chung, Chia-Lin; Huang, Shun-Yuan; Huang, Yu-Ching; Tzean, Shean-Shong; Ann, Pao-Jen; Tsai, Jyh-Nong; Yang, Chin-Cheng; Lee, Hsin-Han; Huang, Tzu-Wei; Huang, Hsin-Yu; Chang, Tun-Tschu; Lee, Hui-Lin; Liou, Ruey-Fen

    2015-01-01

    Since the 1990s, brown root rot caused by Phellinus noxius (Corner) Cunningham has become a major tree disease in Taiwan. This fungal pathogen can infect more than 200 hardwood and softwood tree species, causing gradual to fast decline of the trees. For effective control, we must determine how the pathogen is disseminated and how the new infection center of brown root rot is established. We performed Illumina sequencing and de novo assembly of a single basidiospore isolate Daxi42 and obtained...

  12. Polycyclic aromatic hydrocarbon degradation by the white rot fungus Bjerkandera sp. strain BOS55.

    NARCIS (Netherlands)

    Kotterman, M.J.J.

    1998-01-01

    Outline of this thesisIn this thesis the conditions for optimal PAH oxidation by the white rot fungus Bjerkandera sp. strain BOS55 were evaluated. In Chapter 2, culture conditions like aeration and cosubstrate concentrations, which influenced the oxidation of the PAH compound anthra

  13. Biological pretreatment of corn stover with white-rot fungus for improved enzymatic hydrolysis

    Science.gov (United States)

    Biological pretreatment of lignocellulosic biomass by white-rot fungus can represent a low-cost and eco-friendly alternative to harsh physical, chemical or physico-chemical pretreatment methods to facilitate enzymatic hydrolysis. However, fungal pretreatment can cause carbohydrate loss and it is, th...

  14. Biodegradation of pentachlorophenol by the white rot fungus Phanerochaete chrysosporium (1988)

    Science.gov (United States)

    Extensive biodegradation of pentachlorophenol (PCP) by the white rot fungus Phanerochaete chrysosporium was demonstrated by the disappearance and mineralization of [14C]PCP in nutrient nitrogen-limited culture. Mass balance analyses demonstrated the formation of water-soluble met...

  15. Brown rot on nuts of Castanea sativa Mill: an emerging disease and its causal agent

    OpenAIRE

    Maresi G; Oliveira Longa CM; Turchetti T

    2013-01-01

    The quality and quantity of nut production are fundamental to the economic viability of chestnut cultivation, yet recent reports indicate that severe damage due to moulds represents a significant problem for growers. We carried out an investigation of the agents of chestnut rot and internal fruit damage in three orchards in Italy. Black and brown rot, as well as insect damage, were found in all the areas examined. Brown rot appeared to be the main cause of damage, affecting 8% to 49% and 2% t...

  16. The ligninolytic system of the white rot fungus Pycnoporus cinnabarinus: purification and characterization of the laccase.

    OpenAIRE

    Eggert, C.; Temp, U.; Eriksson, K E

    1996-01-01

    The white rot fungus Pycnoporus cinnabarinus was characterized with respect to its set of extracellular phenoloxidases. Laccase was produced as the predominant extracellular phenoloxidase in conjunction with low amounts of an unusual peroxidase. Neither lignin peroxidase nor manganese peroxidase was detected. Laccase was produced constitutively during primary metabolism. Addition of the most effective inducer, 2,5-xylidine, enhanced laccase production ninefold without altering the isoenzyme p...

  17. Efficacy of Edible Film Incorporated with Essential Oils against White-rot Decay Fungus (Trametes versicolor)

    OpenAIRE

    Saifon Phothisuwan; Narumol Matan

    2013-01-01

    Antifungal activities of edible film incorporated with essential oils (cinnamon oil, clove oil, anise oil, citronella oil, orange oil, tangerine oil, turmeric oil, guava leave oil, nutmeg oil and lime oil) against a white-rot decay fungus (Trametes versicolor) identified from rubberwood were investigated. The disc dilution method was employed to determine the minimal inhibitory concentration (MIC) and minimal fungicidal concentration (MFC) by mixing edible film with essential oil at ratios 1:...

  18. Direct ethanol production from starch, wheat bran and rice straw by the white rot fungus Trametes hirsuta

    NARCIS (Netherlands)

    Okamoto, Kenji; Nitta, Yasuyuki; Maekawa, Nitaro; Yanase, Hideshi

    2011-01-01

    The white rot fungus Trametes hirsuta produced ethanol from a variety of hexoses: glucose, mannose, cellobiose and maltose, with yields of 0.49. 0.48, 0.47 and 0.47 g/g of ethanol per sugar utilized, respectively. In addition, this fungus showed relatively favorable xylose consumption and ethanol pr

  19. Comparing lignocellulose physiochemistry after decomposition by brown rot fungi with distinct evolutionary origins.

    Science.gov (United States)

    Kaffenberger, Justin T; Schilling, Jonathan S

    2015-12-01

    Among wood-degrading fungi, lineages holding taxa that selectively metabolize carbohydrates without significant lignin removal (brown rot) are polyphyletic, having evolved multiple times from lignin-removing white rot fungi. Given the qualitative nature of the 'brown rot' classifier, we aimed to quantify and compare the temporal sequence of carbohydrate removal among brown rot clades. Lignocellulose deconstruction was compared among fungi using distinct plant substrates (angiosperm, conifer, grass). Specifically, aspen, pine and corn stalk were harvested over a 16-week time series from microcosms containing Gloeophyllum trabeum, Fomitopsis pinicola, Ossicaulis lignatilis, Fistulina hepatica, Serpula lacrymans, Wolfiporia cocos or Dacryopinax sp. After quantifying plant mass loss, a thorough compositional analysis was complemented by a saccharification test to determine wood cell wall accessibility. Mass loss and accessibility varied depending on fungal decomposer and substrate, and trajectories of loss for hemicellulosic components and cellulose differed among plant tissue types. At any given stage of decomposition, however, lignocellulose accessibility and the fraction remaining of carbohydrates and lignin within a plant tissue type were generally the same, regardless of fungal isolate. This suggests that the sequence of plant component removal at this typical scale of characterization is shared among these brown rot lineages, despite their diverse genomes and secretomes. PMID:25181619

  20. The brown rot fungi of fruit crops (Monilinia spp.), with special reference to Monilinia fructigena (Aderh. & Ruhl.) Honey

    OpenAIRE

    Leeuwen, van

    2000-01-01

    The brown rot fungi of fruit crops ( Monilinia spp.) cause blossom blight, twig blight, and fruit rot in rosaceous fruit crops in the temperate regions of the world. Three species are distinguished, of which M. fructicola and M. laxa are predominant in stone fruit culture, whereas M. fructigena is in pome fruits. This thesis deals partly with taxonomy and identification of the brown rot fungi, and with the epidemiology of M. fructigena in pome fruits.M. fructicola is considered as a quarantin...

  1. Detection of potato brown rot and ring rot by electronic nose: from laboratory to real scale.

    Science.gov (United States)

    Biondi, E; Blasioli, S; Galeone, A; Spinelli, F; Cellini, A; Lucchese, C; Braschi, I

    2014-11-01

    A commercial electronic nose (e-nose) equipped with a metal oxide sensor array was trained to recognize volatile compounds emitted by potatoes experimentally infected with Ralstonia solanacearum or Clavibacter michiganensis subsp. sepedonicus, which are bacterial agents of potato brown and ring rot, respectively. Two sampling procedures for volatile compounds were tested on pooled tubers sealed in 0.5-1 L jars at room temperature (laboratory conditions): an enrichment unit containing different adsorbent materials (namely, Tenax(®) TA, Carbotrap, Tenax(®) GR, and Carboxen 569) directly coupled with the e-nose (active sampling) and a Radiello(™) cartridge (passive sampling) containing a generic Carbograph fiber. Tenax(®) TA resulted the most suitable adsorbent material for active sampling. Linear discriminant analysis (LDA) correctly classified 57.4 and 81.3% total samples as healthy or diseased, when using active and passive sampling, respectively. These results suggested the use of passive sampling to discriminate healthy from diseased tubers under intermediate and real scale conditions. 80 and 90% total samples were correctly classified by LDA under intermediate (100 tubers stored at 4°C in net bag passively sampled) and real scale conditions (tubers stored at 4°C in 1.25 t bags passively sampled). Principal component analysis (PCA) of sensorial analysis data under laboratory conditions highlighted a strict relationship between the disease severity and the responses of the e-nose sensors, whose sensitivity threshold was linked to the presence of at least one tuber per sample showing medium disease symptoms. At intermediate and real scale conditions, data distribution agreed with disease incidence (percentage of diseased tubers), owing to the low storage temperature and volatile compounds unconfinement conditions adopted. PMID:25127615

  2. A white-rot fungus is used as a biocathode to improve electricity production of a microbial fuel cell

    International Nuclear Information System (INIS)

    White-rot fungus is able to secrete laccase, which can reduce O2 to H2O and has been widely used in enzymatic fuel cells. In this work, a strain of white-rot fungus, Coriolus versicolor, is inoculated in the cathodic chamber of a microbial fuel cell (MFC) to improve cathode reduction efficiency for better electricity generation. 2,2′-Azino-bis(3-ethylbenzothazoline-6-sulfonate), as a redox mediator, is added to the catholyte to facilitate the electron transfer between the electrode and the laccase. The results show that the fungus-based biocathode has better performance than the conventional abiotic cathode, with approximately seven-orders higher power density achieved. This is the first report that white-rot fungus is used to constitute the biocathode of an MFC for improved electricity generation.

  3. Genetic Differentiation and Spatial Structure of Phellinus noxius, the Causal Agent of Brown Root Rot of Woody Plants in Japan.

    Science.gov (United States)

    Akiba, Mitsuteru; Ota, Yuko; Tsai, Isheng J; Hattori, Tsutomu; Sahashi, Norio; Kikuchi, Taisei

    2015-01-01

    Phellinus noxius is a pathogenic fungus that causes brown root rot disease in a variety of tree species. This fungus is distributed in tropical and sub-tropical regions of Southeast and East Asia, Oceania, Australia, Central America and Africa. In Japan, it was first discovered on Ishigaki Island in Okinawa Prefecture in 1988; since then, it has been found on several of the Ryukyu Islands. Recently, this fungus was identified from the Ogasawara (Bonin) Islands, where it has killed trees, including rare endemic tree species. For effective control or quarantine methods, it is important to clarify whether the Japanese populations of P. noxius are indigenous to the area or if they have been introduced from other areas. We developed 20 microsatellite markers from genome assembly of P. noxius and genotyped 128 isolates from 12 of the Ryukyu Islands and 3 of the Ogasawara Islands. All isolates had unique genotypes, indicating that basidiospore infection is a primary dissemination method for the formation of new disease foci. Genetic structure analyses strongly supported genetic differentiation between the Ryukyu populations and the Ogasawara populations of P. noxius. High polymorphism of microsatellite loci suggests that Japanese populations are indigenous or were introduced a very long time ago. We discuss differences in invasion patterns between the Ryukyu Islands and the Ogasawara Islands. PMID:26513585

  4. Genetic Differentiation and Spatial Structure of Phellinus noxius, the Causal Agent of Brown Root Rot of Woody Plants in Japan.

    Directory of Open Access Journals (Sweden)

    Mitsuteru Akiba

    Full Text Available Phellinus noxius is a pathogenic fungus that causes brown root rot disease in a variety of tree species. This fungus is distributed in tropical and sub-tropical regions of Southeast and East Asia, Oceania, Australia, Central America and Africa. In Japan, it was first discovered on Ishigaki Island in Okinawa Prefecture in 1988; since then, it has been found on several of the Ryukyu Islands. Recently, this fungus was identified from the Ogasawara (Bonin Islands, where it has killed trees, including rare endemic tree species. For effective control or quarantine methods, it is important to clarify whether the Japanese populations of P. noxius are indigenous to the area or if they have been introduced from other areas. We developed 20 microsatellite markers from genome assembly of P. noxius and genotyped 128 isolates from 12 of the Ryukyu Islands and 3 of the Ogasawara Islands. All isolates had unique genotypes, indicating that basidiospore infection is a primary dissemination method for the formation of new disease foci. Genetic structure analyses strongly supported genetic differentiation between the Ryukyu populations and the Ogasawara populations of P. noxius. High polymorphism of microsatellite loci suggests that Japanese populations are indigenous or were introduced a very long time ago. We discuss differences in invasion patterns between the Ryukyu Islands and the Ogasawara Islands.

  5. CHARACTERIZATION OF WOOD DECAY BY ROT FUNGI USING COLORIMETRY AND INFRARED SPECTROSCOPY

    OpenAIRE

    Mírian de Almeida Costa; Alexandre Florian da Costa; Tereza Cristina Monteiro Pastore; Jez Willian Batista Braga; Joaquim Carlos Gonçalez

    2011-01-01

    Wood samples of marupá (Simarouba amara) and andiroba (Carapa guianenis) were submitted to Trametes versicolor (white rot) and Gloeophylum trabeum (brown rot) fungi attack. Colorimetry was used to determine the color of the wood before and after wood decaying fungi. To evaluate the changes in chemical compounds levels in the wood samples, the diffuse reflectance medium infrared spectroscopy was used. Both wood were non resistant against white rot fungus, while with brown rot attack andiroba w...

  6. Resident bacteria of plums and their potential for controlling brown rot after harvest

    Science.gov (United States)

    Fruit microflora has been the richest source of antagonists against fruit decays and the active ingredient in all currently available commercial biocontrol products. A comprehensive evaluation of plum bacteria for biocontrol activity against Monilinia fructicola, causing brown rot of stone fruit, w...

  7. Control of brown rot of stone fruits by brief heated water immersion treatments

    Science.gov (United States)

    The effectiveness of brief (30 or 60 s) immersion in water at 24, 50, 55, 60, 65, or 70 ºC was evaluated for the control of brown rot, caused by Monilinia fructicola, on California-grown peaches, nectarines, and plums. Inoculated fruits were treated and either stored at 20 ºC for 5 days or at 0 ºC f...

  8. Culturable bacteria from plum fruit surfaces and their potential for controlling brown rot after harvest

    Science.gov (United States)

    Fruit microflora has been the richest source of antagonists against fruit decays and the active ingredient in all currently available commercial biocontrol products. A comprehensive evaluation of plum bacteria for biocontrol activity against Monilinia fructicola, causing brown rot of stone fruit, w...

  9. Evidence from Serpula lacrymans that 2,5-dimethoxyhydroquinone Is a lignocellulolytic agent of divergent brown rot basidiomycetes.

    Science.gov (United States)

    Korripally, Premsagar; Timokhin, Vitaliy I; Houtman, Carl J; Mozuch, Michael D; Hammel, Kenneth E

    2013-04-01

    Basidiomycetes that cause brown rot of wood are essential biomass recyclers in coniferous forest ecosystems and a major cause of failure in wooden structures. Recent work indicates that distinct lineages of brown rot fungi have arisen independently from ligninolytic white rot ancestors via loss of lignocellulolytic enzymes. Brown rot thus proceeds without significant lignin removal, apparently beginning instead with oxidative attack on wood polymers by Fenton reagent produced when fungal hydroquinones or catechols reduce Fe(3+) in colonized wood. Since there is little evidence that white rot fungi produce these metabolites, one question is the extent to which independent lineages of brown rot fungi may have evolved different Fe(3+) reductants. Recently, the catechol variegatic acid was proposed to drive Fenton chemistry in Serpula lacrymans, a brown rot member of the Boletales (D. C. Eastwood et al., Science 333:762-765, 2011). We found no variegatic acid in wood undergoing decay by S. lacrymans. We found also that variegatic acid failed to reduce in vitro the Fe(3+) oxalate chelates that predominate in brown-rotting wood and that it did not drive Fenton chemistry in vitro under physiological conditions. Instead, the decaying wood contained physiologically significant levels of 2,5-dimethoxyhydroquinone, a reductant with a demonstrated biodegradative role when wood is attacked by certain brown rot fungi in two other divergent lineages, the Gloeophyllales and Polyporales. Our results suggest that the pathway for 2,5-dimethoxyhydroquinone biosynthesis may have been present in ancestral white rot basidiomycetes but do not rule out the possibility that it appeared multiple times via convergent evolution. PMID:23377930

  10. Effect of plant extracts and systemic fungicide on the pineapple fruit-rotting fungus, Ceratocystis paradoxa.

    Science.gov (United States)

    Damayanti, M; Susheela, K; Sharma, G J

    1996-01-01

    Antifungal activities of extracts of sixteen plants were tested against Ceratocystis paradoxa which causes soft rot of pineapples. Xanthium strumarium was the most effective followed by Allium sativum. The effectiveness of various extracts against C. paradoxa was in the decreasing order of Meriandra bengalensis, Mentha piperita, Curcuma longa, Phlogacanthus thyrsiflorus, Toona ciliata, Vitex negundo, Azadirachta indica, Eupatorium birmanicum, Ocimum sanctum and Leucas aspera. Extracts of Cassia tora, Gynura cusimba, Calotropis gigantea and Ocimum canum showed poor fungitoxicity. Ethanol was suitable for extraction of the inhibitory substance from X. strumarium. Acetonitrile was highly toxic to this fungus. Millipore filter-sterilized extracts had a more inhibitory effect on the fungus than the autoclaved samples. Treatment of pineapple fruits infested with C. paradoxa by X. strumarium extract reduced the severity of the disease. PMID:9022263

  11. Ethanol Production from Various Sugars and Cellulosic Biomass by White Rot Fungus Lenzites betulinus.

    Science.gov (United States)

    Im, Kyung Hoan; Nguyen, Trung Kien; Choi, Jaehyuk; Lee, Tae Soo

    2016-03-01

    Lenzites betulinus, known as gilled polypore belongs to Basidiomycota was isolated from fruiting body on broadleaf dead trees. It was found that the mycelia of white rot fungus Lenzites betulinus IUM 5468 produced ethanol from various sugars, including glucose, mannose, galactose, and cellobiose with a yield of 0.38, 0.26, 0.07, and 0.26 g of ethanol per gram of sugar consumed, respectively. This fungus relatively exhibited a good ethanol production from xylose at 0.26 g of ethanol per gram of sugar consumed. However, the ethanol conversion rate of arabinose was relatively low (at 0.07 g of ethanol per gram sugar). L. betulinus was capable of producing ethanol directly from rice straw and corn stalks at 0.22 g and 0.16 g of ethanol per gram of substrates, respectively, when this fungus was cultured in a basal medium containing 20 g/L rice straw or corn stalks. These results indicate that L. betulinus can produce ethanol efficiently from glucose, mannose, and cellobiose and produce ethanol very poorly from galactose and arabinose. Therefore, it is suggested that this fungus can ferment ethanol from various sugars and hydrolyze cellulosic materials to sugars and convert them to ethanol simultaneously. PMID:27103854

  12. Biological Control Of The Egyptian Brown Rot In Potato (Solanum Tuberosum L.)

    International Nuclear Information System (INIS)

    Pseudomonas fluorescence, P. aeruginosa, Bacillus subtillus and streptomyces spp. Were used in control of Ralstonia solanacearum, the casual agent of brown rot in potato. In vitro, antagonistic activities showed that streptomyces spp. was the most antagonistic followed by P. fluorescence, Bacillus subtilus and P. aeruginosa respectively. Also, in vivo, biological control of R. solanacearum showed that Streptomyces spp. was found to reduce the percentage of brown rot infection to 5% followed by P. fluorescence, Bacillus subtilus and P. aeruginosa reducing the percentage of infection to 15 , 25 and 40%, respectively. Also, the disease severity when using Streptomyces spp. and P. fluorescence was reduced from 5 to 1 and reduced from 5 to 2 when using Bacillus subtilus and P. aeruginosa.

  13. Reduced-risk fungicides help manage brown rot and other fungal diseases of stone fruit

    OpenAIRE

    Adaskaveg, James E.; Förster, Helga; Gubler, W. Doug; Teviotdale, Beth L.; Thompson, David F.

    2005-01-01

    New reduced-risk fungicides are highly effective in managing both pre- and postharvest diseases of stone fruit crops in California, and they have replaced most previously registered materials. These fungicides have a low impact on the environment, high specificity to target organisms, and low potential for groundwater contamination and human health risks. In stone fruit, they can be successfully used to manage brown rot blossom blight in a new delayed-bloom fungicide application program for l...

  14. Chloro phenols degradation in soil columns inoculated with the with-rot fungus Anthracophyllum discolor Immobilized on wheat grains

    International Nuclear Information System (INIS)

    Anthracophyllum discolor, a white-rot fungus of southern chile, produces ligninolytic enzymes specially manganese peroxidase (MnP), and has been studied for its potential use on bioremediation of contaminated soils with chloro phenols. the main purpose of this study was to evaluate the chloro phenols degradation in soils columns inoculated with Anthracopyllum discolor immobilized on wheat grains. (Author)

  15. Chlorophenols degradation in soil columns inoculated with the with-rot fungus Anthracophyllum discolor Immobilized on wheat grains

    Energy Technology Data Exchange (ETDEWEB)

    Diez, M. C.; Tortella, G.; Navia, R.; Bornhardt, C.

    2009-07-01

    Anthracophyllum discolor, a white-rot fungus of southern chile, produces ligninolytic enzymes specially manganese peroxidase (MnP), and has been studied for its potential use on bioremediation of contaminated soils with chloro phenols. the main purpose of this study was to evaluate the chloro phenols degradation in soils columns inoculated with Anthracopyllum discolor immobilized on wheat grains. (Author)

  16. Draft Genome Sequence of Methylobacterium sp. Strain ARG-1 Isolated from the White-Rot Fungus Armillaria gallica

    Science.gov (United States)

    Collins, Caitlin; Kowalski, Caitlin; Zebrowski, Jessica; Tulchinskaya, Yevgeniya; Tai, Albert K.; James-Pederson, Magdalena

    2016-01-01

    Methylobacterium sp. strain ARG-1 was isolated from a cell culture of hyphal tips of the white-rot fungus Armillaria gallica. We describe here the sequencing, assembly, and annotation of its genome, confirming the presence of genes involved in methylotrophy. This is the first genome announcement of a strain of Methylobacterium associated with A. gallica. PMID:27257212

  17. Application of genomic and quantitative genetic tools to identify candidate resistance genes for brown rot resistance in peach.

    Directory of Open Access Journals (Sweden)

    Pedro J Martínez-García

    Full Text Available The availability of a complete peach genome assembly and three different peach genome sequences created by our group provide new opportunities for application of genomic data and can improve the power of the classical Quantitative Trait Loci (QTL approaches to identify candidate genes for peach disease resistance. Brown rot caused by Monilinia spp., is the most important fungal disease of stone fruits worldwide. Improved levels of peach fruit rot resistance have been identified in some cultivars and advanced selections developed in the UC Davis and USDA breeding programs. Whole genome sequencing of the Pop-DF parents lead to discovery of high-quality SNP markers for QTL genome scanning in this experimental population. Pop-DF created by crossing a brown rot moderately resistant cultivar 'Dr. Davis' and a brown rot resistant introgression line, 'F8,1-42', derived from an initial almond × peach interspecific hybrid, was evaluated for brown rot resistance in fruit of harvest maturity over three seasons. Using the SNP linkage map of Pop-DF and phenotypic data collected with inoculated fruit, a genome scan for QTL identified several SNP markers associated with brown rot resistance. Two of these QTLs were placed on linkage group 1, covering a large (physical region on chromosome 1. The genome scan for QTL and SNP effects predicted several candidate genes associated with disease resistance responses in other host-pathogen systems. Two potential candidate genes, ppa011763m and ppa026453m, may be the genes primarily responsible for M. fructicola recognition in peach, activating both PAMP-triggered immunity (PTI and effector-triggered immunity (ETI responses. Our results provide a foundation for further genetic dissection, marker assisted breeding for brown rot resistance, and development of peach cultivars resistant to brown rot.

  18. Application of genomic and quantitative genetic tools to identify candidate resistance genes for brown rot resistance in peach.

    Science.gov (United States)

    Martínez-García, Pedro J; Parfitt, Dan E; Bostock, Richard M; Fresnedo-Ramírez, Jonathan; Vazquez-Lobo, Alejandra; Ogundiwin, Ebenezer A; Gradziel, Thomas M; Crisosto, Carlos H

    2013-01-01

    The availability of a complete peach genome assembly and three different peach genome sequences created by our group provide new opportunities for application of genomic data and can improve the power of the classical Quantitative Trait Loci (QTL) approaches to identify candidate genes for peach disease resistance. Brown rot caused by Monilinia spp., is the most important fungal disease of stone fruits worldwide. Improved levels of peach fruit rot resistance have been identified in some cultivars and advanced selections developed in the UC Davis and USDA breeding programs. Whole genome sequencing of the Pop-DF parents lead to discovery of high-quality SNP markers for QTL genome scanning in this experimental population. Pop-DF created by crossing a brown rot moderately resistant cultivar 'Dr. Davis' and a brown rot resistant introgression line, 'F8,1-42', derived from an initial almond × peach interspecific hybrid, was evaluated for brown rot resistance in fruit of harvest maturity over three seasons. Using the SNP linkage map of Pop-DF and phenotypic data collected with inoculated fruit, a genome scan for QTL identified several SNP markers associated with brown rot resistance. Two of these QTLs were placed on linkage group 1, covering a large (physical) region on chromosome 1. The genome scan for QTL and SNP effects predicted several candidate genes associated with disease resistance responses in other host-pathogen systems. Two potential candidate genes, ppa011763m and ppa026453m, may be the genes primarily responsible for M. fructicola recognition in peach, activating both PAMP-triggered immunity (PTI) and effector-triggered immunity (ETI) responses. Our results provide a foundation for further genetic dissection, marker assisted breeding for brown rot resistance, and development of peach cultivars resistant to brown rot. PMID:24244329

  19. Production of cellobiose dehydrogenase from a newly isolated white rot fungus Termitomyces sp. OE147.

    Science.gov (United States)

    Gupta, Gupteshwar; Gangwar, Rishabh; Gautam, Ashwani; Kumar, Lalit; Dhariwal, Anuj; Sahai, Vikram; Mishra, Saroj

    2014-08-01

    Class I cellobiose dehydrogenases (CDHs) are extracellular hemoflavo enzymes produced at low levels by the Basidiomycetes (white rot fungi). In presence of suitable electron acceptors, e.g., cytochrome c, 2,6-dichlorophenol-indophenol, or metal ions, it oxidizes cellobiose to cellobionolactone. A stringent requirement for disaccharides makes CDH also useful for conversion of lactose to lactobionic acid, an important ingredient in pharma and detergent industry. In this work, class I CDH was produced using a newly identified white rot fungus Termitomyces sp. OE147. Four media were evaluated for CDH production, and maximum enzyme activity of 0.92 international unit (IU)/ml was obtained on Ludwig medium under submerged conditions. Statistical optimization of N source, which had significant effect on CDH production, using Box-Behnken design followed by optimization of inoculum size and age resulted in an increase in activity to 2.9 IU/ml and a productivity of ~25 IU/l/h. The nearly purified CDH exhibited high activity of 26.4 IU/mg protein on lactose indicating this enzyme to be useful for lactobionic acid synthesis. Some of the internal peptide sequences bore 100 % homology to the CDH produced in Myceliophthora thermophila. The fungal isolate was amenable to scale up, and an overall productivity of ~18 IU/l/h was obtained at 14-l level. PMID:24929309

  20. Molecular Detection of Monilinia fructigena as Causal Agent of Brown Rot on Quince

    Directory of Open Access Journals (Sweden)

    Jovana Hrustić

    2012-01-01

    Full Text Available Species of the genus Monilinia are important causal agents of fruit rot on pome and stone fruits in Serbia. The pathogen is very harmful, especially on small properties and cottage plantations where intensive control measures are not applied. Quince is importanthost for the pathogens of this genus. During spring 2010, intensive occurrence of mummified fruits overwintering on branches of the quince was observed. The pathogen was isolated using standard phytopathological methods. Pathogenicity of eight obtained isolates was tested by artificial inoculation of injured apple fruits. Identification was performed according to pathogenic, morphological and ecological properties, and was confirmed by Multiplex polimeraze chain reaction, PCR. All the isolates studied caused brown rot on inoculated apple fruits. The isolates form light yellow colonies with lobate margins,with single-celled, transparent, elliptical or oval conidia in chains, regardless temperature or light presence. Sclerotia are observed in 14 days old cultures. The highest growth rate of most of the isolates is at 27°C and in dark. Based on studied pathogenic, morphological and ecological characteristics, it was found that the Monilinia fructigena is causal agent of brown rot of quince. Using specific primers (MO368-5, MO368-8R, MO368-10R, Laxa-R2for detection of Monilinia species in Multiplex PCR reaction, the expected fragment 402 bp in size was amplified, which confirmed that the studied isolates belonged to the speciesM. fructigena.

  1. Saccharification of Lignocelluloses by Carbohydrate Active Enzymes of the White Rot Fungus Dichomitus squalens.

    Directory of Open Access Journals (Sweden)

    Johanna Rytioja

    Full Text Available White rot fungus Dichomitus squalens is an efficient lignocellulose degrading basidiomycete and a promising source for new plant cell wall polysaccharides depolymerizing enzymes. In this work, we focused on cellobiohydrolases (CBHs of D. squalens. The native CBHI fraction of the fungus, consisting three isoenzymes, was purified and it maintained the activity for 60 min at 50°C, and was stable in acidic pH. Due to the lack of enzyme activity assay for detecting only CBHII activity, CBHII of D. squalens was produced recombinantly in an industrially important ascomycete host, Trichoderma reesei. CBH enzymes of D. squalens showed potential in hydrolysis of complex lignocellulose substrates sugar beet pulp and wheat bran, and microcrystalline cellulose, Avicel. Recombinant CBHII (rCel6A of D. squalens hydrolysed all the studied plant biomasses. Compared to individual activities, synergistic effect between rCel6A and native CBHI fraction of D. squalens was significant in the hydrolysis of Avicel. Furthermore, the addition of laccase to the mixture of CBHI fraction and rCel6A significantly enhanced the amount of released reducing sugars from sugar beet pulp. Especially, synergy between individual enzymes is a crucial factor in the tailor-made enzyme mixtures needed for hydrolysis of different plant biomass feedstocks. Our data supports the importance of oxidoreductases in improved enzyme cocktails for lignocellulose saccharification.

  2. Saccharification of Lignocelluloses by Carbohydrate Active Enzymes of the White Rot Fungus Dichomitus squalens.

    Science.gov (United States)

    Rytioja, Johanna; Hildén, Kristiina; Mäkinen, Susanna; Vehmaanperä, Jari; Hatakka, Annele; Mäkelä, Miia R

    2015-01-01

    White rot fungus Dichomitus squalens is an efficient lignocellulose degrading basidiomycete and a promising source for new plant cell wall polysaccharides depolymerizing enzymes. In this work, we focused on cellobiohydrolases (CBHs) of D. squalens. The native CBHI fraction of the fungus, consisting three isoenzymes, was purified and it maintained the activity for 60 min at 50°C, and was stable in acidic pH. Due to the lack of enzyme activity assay for detecting only CBHII activity, CBHII of D. squalens was produced recombinantly in an industrially important ascomycete host, Trichoderma reesei. CBH enzymes of D. squalens showed potential in hydrolysis of complex lignocellulose substrates sugar beet pulp and wheat bran, and microcrystalline cellulose, Avicel. Recombinant CBHII (rCel6A) of D. squalens hydrolysed all the studied plant biomasses. Compared to individual activities, synergistic effect between rCel6A and native CBHI fraction of D. squalens was significant in the hydrolysis of Avicel. Furthermore, the addition of laccase to the mixture of CBHI fraction and rCel6A significantly enhanced the amount of released reducing sugars from sugar beet pulp. Especially, synergy between individual enzymes is a crucial factor in the tailor-made enzyme mixtures needed for hydrolysis of different plant biomass feedstocks. Our data supports the importance of oxidoreductases in improved enzyme cocktails for lignocellulose saccharification. PMID:26660105

  3. Transcriptomic analysis of the white rot fungus Polyporus brumalis provides insight into sesquiterpene biosynthesis.

    Science.gov (United States)

    Lee, Su-Yeon; Kim, Myungkil; Kim, Seon-Hong; Hong, Chang-Young; Ryu, Sun-Hwa; Choi, In-Gyu

    2016-01-01

    Object of this study was to identify genes and enzymes that are involved in sesquiterpene biosynthesis in the wood rotting fungus, Polyporus brumalis. Sesquiterpenes, β-eudesmane and β-eudesmol, were produced by the mycelium of P. brumalis cultured in modified medium. However, theses final products were not observed when the fungus was grown in potato dextrose medium. We used next generation sequencing (NGS) to identify differentially expressed genes (DEGs) related to terpene metabolism. This approach generated 25,000 unigenes and 127 metabolic pathways that were assigned to Kyoto Encyclopedia Genes Groups (KEGG). Further analysis of samples from modified medium indicated significant upregulation of 8 unigenes involved in the mevalonate (MVA) and methylerythritol phosphate (MEP) biosynthetic pathways. These pathways generate isopentenyl pyrophosphate (IPP) and farnesyl pyrophosphate (FPP), which are precursors for the synthesis of sesquiterpenes. Furthermore, genes encoding germacrene A synthase, which facilitate the cyclization of FPP, were only differentially expressed in mycelium from fungi grown in modified medium. Our data provide a resource for studying the molecular mechanisms underpinning sesquiterpene biosynthesis and terpene metabolism. PMID:26686622

  4. Aggregation and feeding behavior of the formosan subterranean termite (Isoptera: Rhinotermitidae) on wood decayed by three species of wood rot fungi

    Science.gov (United States)

    Aggregation and feeding behavior of the Formosan subterranean termite, Coptotermes formosanus Shiraki, was evaluated on wood decayed by three species of fungus that use different enzymatic pathways to degrade lignocellulose, the brown rot fungus, Gloeophyllum trabeum and two white rot fungi, Phanero...

  5. The Genetic Structure of Phellinus noxius and Dissemination Pattern of Brown Root Rot Disease in Taiwan.

    Directory of Open Access Journals (Sweden)

    Chia-Lin Chung

    Full Text Available Since the 1990s, brown root rot caused by Phellinus noxius (Corner Cunningham has become a major tree disease in Taiwan. This fungal pathogen can infect more than 200 hardwood and softwood tree species, causing gradual to fast decline of the trees. For effective control, we must determine how the pathogen is disseminated and how the new infection center of brown root rot is established. We performed Illumina sequencing and de novo assembly of a single basidiospore isolate Daxi42 and obtained a draft genome of ~40 Mb. By comparing the 12,217 simple sequence repeat (SSR regions in Daxi42 with the low-coverage Illumina sequencing data for four additional P. noxius isolates, we identified 154 SSR regions with potential polymorphisms. A set of 13 polymorphic SSR markers were then developed and used to analyze 329 P. noxius isolates collected from 73 tree species from urban/agricultural areas in 14 cities/counties all around Taiwan from 1989 to 2012. The results revealed a high proportion (~98% of distinct multilocus genotypes (MLGs and that none of the 329 isolates were genome-wide homozygous, which supports a possible predominant outcrossing reproductive mode in P. noxius. The diverse MLGs exist as discrete patches, so brown root rot was most likely caused by multiple clones rather than a single predominant strain. The isolates collected from diseased trees near each other tend to have similar genotype(s, which indicates that P. noxius may spread to adjacent trees via root-to-root contact. Analyses based on Bayesian clustering, FST statistics, analysis of molecular variance, and isolation by distance all suggest a low degree of population differentiation and little to no barrier to gene flow throughout the P. noxius population in Taiwan. We discuss the involvement of basidiospore dispersal in disease dissemination.

  6. The Genetic Structure of Phellinus noxius and Dissemination Pattern of Brown Root Rot Disease in Taiwan.

    Science.gov (United States)

    Chung, Chia-Lin; Huang, Shun-Yuan; Huang, Yu-Ching; Tzean, Shean-Shong; Ann, Pao-Jen; Tsai, Jyh-Nong; Yang, Chin-Cheng; Lee, Hsin-Han; Huang, Tzu-Wei; Huang, Hsin-Yu; Chang, Tun-Tschu; Lee, Hui-Lin; Liou, Ruey-Fen

    2015-01-01

    Since the 1990s, brown root rot caused by Phellinus noxius (Corner) Cunningham has become a major tree disease in Taiwan. This fungal pathogen can infect more than 200 hardwood and softwood tree species, causing gradual to fast decline of the trees. For effective control, we must determine how the pathogen is disseminated and how the new infection center of brown root rot is established. We performed Illumina sequencing and de novo assembly of a single basidiospore isolate Daxi42 and obtained a draft genome of ~40 Mb. By comparing the 12,217 simple sequence repeat (SSR) regions in Daxi42 with the low-coverage Illumina sequencing data for four additional P. noxius isolates, we identified 154 SSR regions with potential polymorphisms. A set of 13 polymorphic SSR markers were then developed and used to analyze 329 P. noxius isolates collected from 73 tree species from urban/agricultural areas in 14 cities/counties all around Taiwan from 1989 to 2012. The results revealed a high proportion (~98%) of distinct multilocus genotypes (MLGs) and that none of the 329 isolates were genome-wide homozygous, which supports a possible predominant outcrossing reproductive mode in P. noxius. The diverse MLGs exist as discrete patches, so brown root rot was most likely caused by multiple clones rather than a single predominant strain. The isolates collected from diseased trees near each other tend to have similar genotype(s), which indicates that P. noxius may spread to adjacent trees via root-to-root contact. Analyses based on Bayesian clustering, FST statistics, analysis of molecular variance, and isolation by distance all suggest a low degree of population differentiation and little to no barrier to gene flow throughout the P. noxius population in Taiwan. We discuss the involvement of basidiospore dispersal in disease dissemination. PMID:26485142

  7. Application of Genomic and Quantitative Genetic Tools to Identify Candidate Resistance Genes for Brown Rot Resistance in Peach

    OpenAIRE

    Martínez-García, Pedro J.; Parfitt, Dan E; Bostock, Richard M.; Fresnedo-Ramírez, Jonathan; Vazquez-Lobo, Alejandra; Ogundiwin, Ebenezer A; Gradziel, Thomas M.; Crisosto, Carlos H

    2013-01-01

    The availability of a complete peach genome assembly and three different peach genome sequences created by our group provide new opportunities for application of genomic data and can improve the power of the classical Quantitative Trait Loci (QTL) approaches to identify candidate genes for peach disease resistance. Brown rot caused by Monilinia spp., is the most important fungal disease of stone fruits worldwide. Improved levels of peach fruit rot resistance have been identified in some culti...

  8. Role of brown-rot fungi in the bioremoval of azo dyes under different conditions

    OpenAIRE

    Naeem Ali; Abdul Hameed; Safia Ahmed

    2010-01-01

    The present study is vital to the understanding of bioremediation of structurally different azo dyes by some unusual Brown-rot fungi. Bioremoval of each dye (20 mg l-1) was tested in two different culture media under static and shaking conditions by taking inocula from different fungi. Fungal strains showed varying dyes removal abilities, though considerable high in case of Acid Red (AR) 151(di-azo) as compared to Orange (Or) II (mono-azo). With an exception of Aspergillus tereus SA3, all the...

  9. A DNA based method to detect the grapevine root-rotting fungus Roesleria subterranea in soil and root samples

    OpenAIRE

    Neuhauser, Sigrid; Huber, Lars; Kirchmair, Martin

    2009-01-01

    Roesleria subterranea causes root rot in grapevine and fruit trees. The fungus has long been underestimated as a weak parasite, but during the last years it has been reported to cause severe damages in German vineyards. Direct, observation-based detection of the parasite is time consuming and destructive, as large parts of the rootstocks have to be uprooted and screened for the tiny, stipitate, hypogeous ascomata of R. subterranea. To facilitate rapid detection in vineyards, protocols to extr...

  10. Bio-Treatment of Energetic Materials Using White-Rot Fungus

    Energy Technology Data Exchange (ETDEWEB)

    MM Shah

    1998-11-12

    The nitramine explosive, octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX), is used by militaries around the world in high yield munitions and often in combination with hexahydro- 1,3,5-trirdtro- 1,3,5- triazine (RDX). Improper handling and disposal of manufacturing wastewater may lead to environmental contamination. In the past wastewater was collected in disposal lagoons where it evaporated, and deposited large amounts of explosives on the lagoon floor. Although lagoon disposal is no longer practiced, thousands of acres have been already contaminated. RDX and, to a lesser extent, HMX have leached through the soil subsurface and contaminated groundwater ( 1,2). Likewjse, burning of substandard material or demilitarization of out-of-date muriitions has also led to environmental contamination. The current stockpile of energetic materials at DOE sites requires resource recovery or disposition (RRD). A related challenge exists in the clean-up of the DOE sites where soil and ground water are contaminated with explosives. Current technologies such as incineration, molten salt process, supercritical water oxidation are expensive and have technical hurdles. Open burning and open detonation(OB/OD) is not encouraged by regulatory agencies for disposal of explosives. Hence, there is need for a safe . technology to degrade these contaminants. The fi.mgal process does not employ open burning or open detonation to destroy energetic materials. The fimgal process can be used by itself, or it can augment or support other technologies for the treatment of energetic materials. The proposed enzyme technology will not release any air pollutants and will meet the regulations of Clean Air Act amendments, the Resource Conservation and Recovery Act, and the Federal. Facilities Compliance Act. The goal for this project was to test the ability of white-rot fungus to degrade HMX. In our study, we investigated the biodegradation of HMX using white-rot fungus in liquid and solid cultures

  11. Potential applications of the white rot fungus Pleurotus in bioregenerative life support systems

    Science.gov (United States)

    Manukovsky, N. S.; Kovalev, V. S.; Yu, Ch.; Gurevich, Yu. L.; Liu, H.

    Earlier we demonstrated the possibility of using soil-like substrate SLS for plant cultivation in bioregenerative life support systems BLSS We suggest dividing the process of SLS bioregeneration at BLSS conditions into two stages At the first stage plant residues should be used for growing of white rot fungus Pleurotus ostreatus Pleurotus florida etc The fruit bodies could be used as food Spent mushroom compost is carried in SLS and treated by microorganisms and worms at the second stage The possibility of extension of human food ration is only one of the reasons for realization of the suggested two-stage SLS regeneration scheme people s daily consumption of mushrooms is limited to 200 -250 g of wet weight or 20 -25 g of dry weight Multiple tests showed what is more important is that inclusion of mushrooms into the system cycle scheme contributes through various mechanisms to the more stable functioning of vegetative cenosis in general Taking into account the given experimental data we determined the scheme of mushroom module material balance The technological peculiarities of mushroom cultivation at BLSS conditions are being discussed

  12. Identification of naphthalene metabolism by white rot fungus Armillaria sp.F022

    Institute of Scientific and Technical Information of China (English)

    Tony Hadibarata; Abdull Rahim Mohd Yusoff; Azmi Aris; Risky Ayu Kristanti

    2012-01-01

    Armillaria sp.F022,a white rot fungus isolated from tropical rain forest (Samarinda,Indonesia) was used to biodegrade naphthalene in cultured medium.Transformation of naphthalene by Armillaria sp.F022 which is able to use naphthalene,a two ring-polycyclic aromatic hydrocarbon (PAH) as a source of carbon and energy was investigated.The metabolic pathway was elucidated by identifying metabolites,biotransformation studies and monitoring enzyme activities in cell-free extracts.The identification of metabolites suggests that Armillaria sp.F022 initiates its attack on naphthalene by dioxygenation at its C-1 and C-4 positions to give 1,4-naphthoquinone.The intermediate 2-hydroxybenzaldehyde and salicylic acid,and the characteristic of the meta-cleavage of the resulting diol were identified in the long-term incubation.A part from typical metabolites of naphthalene degradation known from mesophiles,benzoic acid was identified as the next intermediate for the naphthalene pathway of this Armillaria sp.F022.Neither phthalic acid,catechol and cis,cis-muconic acid metabolites were detected in culture extracts.Several enzymes (manganese peroxidase,lignin peroxidase,laccase,1,2-dioxygenase and 2,3-dioxygenase) produced by Armillaria sp.F022 were detected during the incubation.

  13. Molecular characterization of manganese peroxidases from white-rot fungus Polyporus brumalis.

    Science.gov (United States)

    Ryu, Sun-Hwa; Kim, Boyeong; Kim, Myungkil; Seo, Jin-Ho

    2014-03-01

    The cDNAs of six manganese-dependent peroxidases (MnPs) were isolated from white-rot fungus Polyporus brumalis. The MnP proteins shared similar properties with each other in terms of size (approximately 360-365 amino acids) and primary structure, showing 62-96 % amino acid sequence identity. RT-PCR analysis indicated that these six genes were predominantly expressed in shallow stationary culture (SSC) in a liquid medium. Gene expression was induced by treatment with dibutyl phthalate (DBP) and wood chips. Expression of pbmnp4 was strongly induced by both treatments, whereas that of pbmnp5 was induced only by DBP, while pbmnp6 was induced by wood chips only. Then, we overexpressed pbmnp4 in P. brumalis under the control of the GPD promoter. Overexpression of pbmnp4 effectively increased MnP activity; the transformant that had the highest MnP activity also demonstrated the most effective decolorization of Remazol Brilliant Blue R dye. Identification of MnP cDNAs can contribute to the efficient production of lignin-degradation enzymes and may lead to utilization of basidiomycetous fungi for degradation of lignin and numerous recalcitrant xenobiotics. PMID:23828244

  14. FTIR and XPS analysis of the changes in bamboo chemical structure decayed by white-rot and brown-rot fungi

    International Nuclear Information System (INIS)

    In order to investigate different types of decay mechanisms in bamboo (Phyllostachys edulis), the chemical structure and microstructure of bamboo samples decayed by P. chrysosporium (White-rot) and G. trabeum (Brown-rot) for 12 weeks were studied. The analysis methods include fourier transform infrared spectroscopy (FTIR), X-ray photoelectron spectroscopy (XPS), and scanning electron spectroscopy (SEM). By using the SEM method, it was found that attacks to parenchyma cells and places near the inner skin of bamboo were the most frequent and the vessels were the primary paths for the spread of mycelium in the bamboo. FTIR and XPS results showed that the crystallinity (I1425/I896) of bamboo decreased after being decayed by these two fungi and the crystalline cellulose in bamboo was degraded. The white-rot P. chrysosporium had stronger degradability on lignin compared to hemicellulose and cellulose in bamboo. And the brown-rot G. trabeum had preferential degradability on hemicellulose fraction over cellulose and lignin. Oxidation and hydrolysis surface reactions occurred during the process of decay, but the reaction rates for cellulose and lignin were different.

  15. FTIR and XPS analysis of the changes in bamboo chemical structure decayed by white-rot and brown-rot fungi

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Guoqi [College of Engineering and Technology, Northeast Forestry University, Harbin 150040 (China); Wang, Lihai, E-mail: xu12nefu@sina.cn [College of Engineering and Technology, Northeast Forestry University, Harbin 150040 (China); Liu, Junliang [Research Institute of Wood Industry, Chinese Academy of Forestry, Beijing 100091 (China); Wu, Jinzhuo [College of Engineering and Technology, Northeast Forestry University, Harbin 150040 (China)

    2013-09-01

    In order to investigate different types of decay mechanisms in bamboo (Phyllostachys edulis), the chemical structure and microstructure of bamboo samples decayed by P. chrysosporium (White-rot) and G. trabeum (Brown-rot) for 12 weeks were studied. The analysis methods include fourier transform infrared spectroscopy (FTIR), X-ray photoelectron spectroscopy (XPS), and scanning electron spectroscopy (SEM). By using the SEM method, it was found that attacks to parenchyma cells and places near the inner skin of bamboo were the most frequent and the vessels were the primary paths for the spread of mycelium in the bamboo. FTIR and XPS results showed that the crystallinity (I1425/I896) of bamboo decreased after being decayed by these two fungi and the crystalline cellulose in bamboo was degraded. The white-rot P. chrysosporium had stronger degradability on lignin compared to hemicellulose and cellulose in bamboo. And the brown-rot G. trabeum had preferential degradability on hemicellulose fraction over cellulose and lignin. Oxidation and hydrolysis surface reactions occurred during the process of decay, but the reaction rates for cellulose and lignin were different.

  16. Brown rot fungal early stage decay mechanism as a biological pretreatment for softwood biomass in biofuel production

    Energy Technology Data Exchange (ETDEWEB)

    Ray, Michael J.; Leak, David J.; Spanu, Pietro D.; Murphy, Richard J. [Division of Biology, Faculty of Natural Sciences, Imperial College London, London SW7 2AZ (United Kingdom); Porter Alliance, Imperial College London, London SW7 2AZ (United Kingdom)

    2010-08-15

    A current barrier to the large-scale production of lignocellulosic biofuels is the cost associated with the energy and chemical inputs required for feedstock pretreatment and hydrolysis. The use of controlled partial biological degradation to replace elements of the current pretreatment technologies would offer tangible energy and cost benefits to the whole biofuel process. It has been known for some time from studies of wood decay that, in the early stages of growth in wood, brown rot fungi utilise a mechanism that causes rapid and extensive depolymerisation of the carbohydrate polymers of the wood cell wall. The brown rot hyphae act as delivery vectors to the plant cell wall for what is thought to be a combination of a localised acid pretreatment and a hydroxyl radical based depolymerisation of the cell wall carbohydrate polymers. It is this quality that we have exploited in the present work to enhance the saccharification potential of softwood forest residues for biofuel production. Here we show that after restricted exposure of pine sapwood to brown rot fungi, glucose yields following enzymatic saccharification are significantly increased. Our results demonstrate the potential of using brown rot fungi as a biological pretreatment for biofuel production. (author)

  17. Difference between chitosan and oligochitosan in growth of Monilinia fructicola and control of brown rot in peach fruit

    Science.gov (United States)

    Chitosan (CS) and oligochitosan (OCS), as natural antifungal agents, have been primarily used as alternatives to synthetic chemical fungicides to control postharvest diseases of fruits. The effectiveness of these two agents on the growth of Monilinia fructicola to control brown rot has not yet been...

  18. Candida pruni sp. nov. is a new yeast species with antagonistic potential against brown rot of peaches.

    Science.gov (United States)

    Zhang, Dian-peng; Lu, Cai-ge; Zhang, Tao-tao; Spadaro, Davide; Liu, De-wen; Liu, Wei-cheng

    2014-07-01

    Brown rot caused by Monilinia spp. is among the most important postharvest diseases of commercially grown stone fruits, and application of antagonistic yeasts to control brown rot is one promising strategy alternative to chemical fungicides. In this research, new yeast strains were isolated and tested for their activity against peach brown rot caused by Monilinia fructicola. Three yeast strains were originally isolated from the surface of plums (cv Chinese Angelino) collected in the north of China. In artificially wounded inoculation tests, the yeast reduced the brown rot incidence to 20 %. The population of the yeast within inoculated wounds on peaches significantly increased at 25 °C from an initial level of 5.0×10(6) to 4.45×10(7) CFU per wound after 1 day. The antagonistic strains were belonging to a new species of the genus Candida by sequence comparisons of 26 S rDNA D1/D2 domain and internal transcribed spacer region. The strains are most closely related to C. asparagi, C. musae and C. fructus on the basis of the phylogenetic trees based on the D1/D2 region of 26S rDNA. However, the strains are notably different from C. asparagi, C. musae and C. fructus, in morphological and physiological characteristics. Therefore, the name Candida pruni is proposed for the novel species, with sp-Quan (=CBS12814T=KCTC 27526T=GCMC 6582T) as the type strain. Our study showed that Candida pruni is a novel yeast species with potential biocontrol against brown rot caused by M. fructicola on peaches. PMID:24908073

  19. Chitosan and oligochitosan enhance the resistance of peach fruit to brown rot.

    Science.gov (United States)

    Ma, Zengxin; Yang, Lingyu; Yan, Haixia; Kennedy, John F; Meng, Xianghong

    2013-04-15

    The effects of chitosan and oligachitosan on resistance induction of peach fruit against brown rot caused by Monilinia fructicola were investigated. Both chitosan and oligochitosan showed significant effect on controlling this disease. Moreover, chitosan and oligochitosan delayed fruit softening and senescence. The two antifungal substances enhanced antioxidant and defense-related enzymes, such as catalase (CAT), peroxidase (POD), β-1,3-glucanase (GLU) and chitinase (CHI), and they also stimulated the transcript expression of POD and GLU. These findings suggest that the effects of chitosan and oligochitosan on disease control and quality maintenance of peach fruit may be associated with their antioxidant property and the elicitation of defense responses in fruit. PMID:23544538

  20. Fungal accumulation of metals from building materials during brown rot wood decay.

    Science.gov (United States)

    Hastrup, Anne Christine Steenkjær; Jensen, Bo; Jellison, Jody

    2014-08-01

    This study analyzes the accumulation and translocation of metal ions in wood during the degradation performed by one strain of each of the three brown rot fungi; Serpula lacrymans, Meruliporia incrassata and Coniophora puteana. These fungi species are inhabitants of the built environment where the prevention and understanding of fungal decay is of high priority. This study focuses on the influence of various building materials in relation to fungal growth and metal uptake. Changes in the concentration of iron, manganese, calcium and copper ions in the decayed wood were analyzed by induced coupled plasma spectroscopy and related to wood weight loss and oxalic acid accumulation. Metal transport into the fungal inoculated wood was found to be dependent on the individual strain/species. The S. lacrymans strain caused a significant increase in total iron whereas the concentration of copper ions in the wood appeared decreased after 10 weeks of decay. Wood inoculated with the M. incrassata isolate showed the contrary tendency with high copper accumulation and low iron increase despite similar weight losses for the two strains. However, significantly lower oxalic acid accumulation was recorded in M. incrassata degraded wood. The addition of a building material resulted in increased weight loss in wood degraded by C. puteana in the soil-block test; however, this could not be directly linked specifically to the accumulation of any of the four metals recorded. The accumulation of oxalic acid seemed to influence the iron uptake. The study assessing the influence of the presence of soil and glass in the soil-block test revealed that soil contributed the majority of the metals for uptake by the fungi and contributed to increased weight loss. The varying uptake observed among the three brown rot fungi strains toward the four metals analyzed may be related to the specific non-enzymatic and enzymatic properties including bio-chelators employed by each of the species during wood

  1. Conidioma production of the white root rot fungus [Rosellinia] in axenic culture under near-ultraviolet light radiation

    International Nuclear Information System (INIS)

    Conidiomata of the white root rot fungus were produced in axenic culture under near-ultraviolet light radiation. Pieces of sterilized Japanese pear twigs were placed on 7-day-old oatmeal agar culture in plates. The plates were further incubated for 5 days and then illuminated by near-ultraviolet light. Synnemata developed on the twigs within 5 weeks in 19 of 20 isolates tested, and conidia were observed in 12 of the 19 isolates. The synnemata and conidia produced were morphologically identical to those of Dematophora necatrix

  2. Production of Ligninolytic Enzymes by White-Rot Fungus Datronia sp. KAPI0039 and Their Application for Reactive Dye Removal

    OpenAIRE

    Pilanee Vaithanomsat; Waraporn Apiwatanapiwat; Oncheera Petchoy; Jirawate Chedchant

    2010-01-01

    This study focused on decolorization of 2 reactive dyes; Reactive Blue 19 (RBBR) and Reactive Black 5 (RB5), by selected white-rot fungus Datronia sp. KAPI0039. The effects of reactive dye concentration, fungal inoculum size as well as pH were studied. Samples were periodically collected for the measurement of color unit, Laccase (Lac), Manganese Peroxidase (MnP), and Lignin Peroxidase (LiP) activity. Eighty-six percent of 1,000 mg L−1 RBBR decolorization was achieved by 2% (w/v) Datronia sp....

  3. Enhanced decolorization of Solar brilliant red 80 textile dye by an indigenous white rot fungus Schizophyllum commune IBL-06

    OpenAIRE

    Asgher, Muhammad; Yasmeen, Qamar; Iqbal, Hafiz Muhammad Nasir

    2013-01-01

    An indigenously isolated white rot fungus, Schizophyllum commune IBL-06 was used to decolorize Solar brilliant red 80 direct dye in Kirk’s basal salts medium. In initial screening study, the maximum decolorization (84.8%) of Solar brilliant red 80 was achieved in 7 days shaking incubation period at pH 4.5 and 30 °C. Different physical and nutritional factors including pH, temperature and fungal inoculum density were statistically optimized through Completely Randomized Design (CRD), to enhanc...

  4. Decolourization potential of white-rot fungus Phanerochaete chrysosporium on synthetic dye bath effluent containing Amido black 10B

    OpenAIRE

    Senthilkumar, S.; M. Perumalsamy; H. Janardhana Prabhu

    2014-01-01

    Synthetic azo dyes are extensively used in textile industry and are not easily degraded into the environment due to their complex structure. Due to the low degree of fixation of these dyes to fabrics, more than 10–15% of the dye does not bind to fabrics during colour processing and release into water bodies as effluent cause serious environmental pollution. White-rot fungus is found to be capable of degrading lignin which has a complex structure similar to azo dyes. In this study, the decolou...

  5. Bioremediation of the heavy metal complex dye Isolan Dark Blue 2SGL-01 by white rot fungus Irpex lacteus

    International Nuclear Information System (INIS)

    Highlights: ► Application of the White rot fungus Irpex lacteus. ► Heavy metal (Cr) conjugated dye. ► Economic, easy, and rapid. ► Non toxic nature of the degraded products. ► Decolorization and degradation at higher concentrations. - Abstract: The present study was conducted to evaluate the decolorization and degradation of the chromium metal complex dye Isolan Dark Blue 2SGL-01 by Irpex lacteus, a white rot lignolytic fungus. I. lacteus effectively decolorized the sulphonated reactive dye at a high concentration of 250 mg/l over a wide range of pH values of 5–9 and temperatures between 20 and 35 °C. Complete (100%) decolorization occurred within 96 h, and I. lacteus demonstrated resistance to the metallic dye. UV–vis spectroscopy, HPLC, GC–MS, and FT-IR analyses of the extracted metabolites confirmed that the decolorization process occurred due to degradation of the dye and not merely by adsorption. GC–MS analysis indicated the formation of 1(2H)-naphthalenone, 3,4-dihydro- and 2-naphthalenol as the main metabolite. ICP analysis demonstrated the removal of 13.49% chromium, and phytotoxicity studies using germinated seeds of Vigna radiata and Brassica juncea demonstrated the nontoxic nature of the metabolites formed during the degradation of Isolan Dark Blue 2SGL-01 dye.

  6. Decolourization potential of white-rot fungus Phanerochaete chrysosporium on synthetic dye bath effluent containing Amido black 10B

    Directory of Open Access Journals (Sweden)

    S. Senthilkumar

    2014-12-01

    Full Text Available Synthetic azo dyes are extensively used in textile industry and are not easily degraded into the environment due to their complex structure. Due to the low degree of fixation of these dyes to fabrics, more than 10–15% of the dye does not bind to fabrics during colour processing and release into water bodies as effluent cause serious environmental pollution. White-rot fungus is found to be capable of degrading lignin which has a complex structure similar to azo dyes. In this study, the decolourization potential of white-rot fungus Phanerochaete chrysosporium, which is capable of decolourizing synthetic dye bath effluent, was investigated. Maximum decolourization of 98% was achieved on the third day under normal conditions. The rate of decolourization carried out at different concentrations revealed that the increase in dye effluent concentration suppresses the percentage decolourization. The optimized amounts of nutrients were found to be 0.5%, 0.1% and 0.5% of glucose, manganese sulphate and ammonium salts, respectively. The addition of inducers such as starch and lignin increased enzyme production and the rate of decolourization.

  7. The Decay Resistance and Hyphae Penetration of Bamboo Gigantochloa scortechinii Decayed by White and Brown Rot Fungi

    Directory of Open Access Journals (Sweden)

    Norul Hisham Hamid

    2012-01-01

    Full Text Available The decay resistance and hyphae penetration of bamboo Gigantochloa scortechinii decayed by white and brown rot fungi were investigated using scanning electron microscope (SEM. The bamboo grown in natural stand from three different age classes of 0.5, 3.5, and 6.5 years was harvested, oven dried, sterilised, and exposed to agar media containing 4% malt extract and 2% agar technical (no. 3 under laboratory condition for 8 weeks. The deterioration was expressed as percentage of weight loss, and the decay resistance classes were measured according to ASTM D 2017-81 (1986. This study found that the percentage weight loss was greatly reduced with the bamboo ageing. Regardless of age, the G. scortechinii was classified as highly resistant to decay by white and brown rot fungi. The scanning electron microscope (SEM observation showed that the fungi hyphae mostly penetrated into the vessel and proceeded to the pit and parenchyma cells.

  8. Lignin demethylation and polysaccharide decomposition in spruce sapwood degraded by brown rot fungi

    Energy Technology Data Exchange (ETDEWEB)

    Filley, T.R.; Cody, G.D.; Noser, C. [Carnegie Inst. of Washington, DC (United States). Geophysical Lab.; Goodell, B. [University of Maine, Orono, ME (United States). Dept. of Wood Science; Jellison, J.; Ostrofsky, A. [University of Maine, Orono, ME (United States). Dept. of Biological Sciences

    2002-07-01

    The organic residues produced in the brown-rot (BR) of wood by many basidiomycetes fungi are ubiquitous on most coniferous forest floors. This degraded wood tissue is characterized by low levels of polysaccharides and a high proportion of demethylated lignin with minor glycerol side chain oxidation. Because of the selective enrichment in an aromatic dihydroxy-rich lignin residue, the chemical and biological reactivity of BR degraded wood will be distinctly different from white rot, the other primary class of fungal wood decay, which typically produces oxidized, lignin-depleted residues. The biochemical mechanism by which BR fungi perform this distinctive degradative chemistry is only starting to become known, and molecular studies which examine the chemical changes imparted to lignin over the long-term decay process are lacking. Using {sup 13}C-labeled tetramethylammonium hydroxide thermochemolysis ({sup 13}C -TMAH) and solid state {sup 13}C NMR, we investigated the relationship between lignin oxidation/demethylation and polysaccharide metabolism in a 32-week time series study of spruce sapwood inoculated with either of two BR fungi (Postia placenta and Gloeophyllum trabeum). Our findings demonstrate a close relationship between lignin demethylation and polysaccharide loss and suggest demethylation may play a mechanistic role in polysaccharide loss, possibly by assisting in Fenton reactions where catechol/quinone oxidation and cycling aids in iron reduction. The residue remaining after 16 weeks of decay is devoid of polysaccharides, in contrast to the 68% polysaccharide carbon present in the initial spruce, and exhibits an increased aromatic dihydroxy content (resulting from demethylation of the 3-methoxyl carbon) of up to 22% of the lignin, as determined by {sup 13}C-TMAH thermochemolysis. In a typical soil or porewater environment these chemical changes would make BR residues highly reactive toward redox sensitive polyvalent metals (e.g. ferric iron) and likely

  9. Postharvest biological control of brown rot in peaches after cold storage preceded by preharvest chemical control 1

    OpenAIRE

    Elizandra Pivotto Pavanello; Auri Brackmann; Fabio Rodrigo Thewes; Thiago Liberalesso Venturini; Anderson Weber; Elena Blume

    2015-01-01

    ABSTRACT Pathogenic fungi cause skin darkening and peach quality depreciation in post harvest. Therefore, alternative techniques to chemical treatment are necessary in order to reduce risks to human health. The aim of this study was to evaluate the effect of the application of Trichoderma harzianum in association with different fungicides applied before harvest to 'Eldorado' peaches for brown rot control and other quality parameters during storage. The treatments consisted of five preharvest ...

  10. Temporal dynamics of brown rot in different apple management systems and importance of dropped fruit for disease development.

    Science.gov (United States)

    Holb, I J; Scherm, H

    2007-09-01

    ABSTRACT Epidemic development of brown rot, caused by Monilinia fructigena, was monitored in integrated and organic apple orchards at two locations in eastern Hungary between 2002 and 2005 on three cultivars with early, midseason, and late ripening periods. Disease incidence and severity measures were affected significantly (P Mutsu. Disease intensity increased markedly in the final 3 to 5 weeks before harvest and was considerably lower in integrated than in organic orchards. Final brown rot incidence on fruit in the tree was correlated with incidence on dropped fruit on the orchard floor (r > 0.75, P < 0.05), whereby the lag period from the appearance of the first symptomatic fruit on the ground to the occurrence of the first symptomatic fruit in the tree ranged from 2 weeks to 2 months, depending on the cultivar. The inflection point of the disease progress curve was attained first by fruit on the ground, followed successively by fruit in the lower, middle, and upper thirds of the tree canopy. This may indicate that dropped fruit that became infected early provided a source of inoculum for subsequent epidemics by serving as a bridge between sporulation from overwintered fruit mummies in the spring and the first fruit with sporulating lesions in the tree in midsummer. Removal of dropped fruit from the orchard floor resulted in a significantly lower disease incidence on fruit in the tree on all cultivars; thus, drop-removal may be useful as a brown rot management practice in apple orchards. PMID:18944175

  11. Postharvest biological control of brown rot in peaches after cold storage preceded by preharvest chemical control 1

    Directory of Open Access Journals (Sweden)

    Elizandra Pivotto Pavanello

    2015-12-01

    Full Text Available ABSTRACT Pathogenic fungi cause skin darkening and peach quality depreciation in post harvest. Therefore, alternative techniques to chemical treatment are necessary in order to reduce risks to human health. The aim of this study was to evaluate the effect of the application of Trichoderma harzianum in association with different fungicides applied before harvest to 'Eldorado' peaches for brown rot control and other quality parameters during storage. The treatments consisted of five preharvest fungicide applications (control, captan, iprodione, iminoctadine and tebuconazole associated with postharvest application of T. harzianum, after cold storage (with and without application, in three evaluation times (zero, two and four days at 20 °C, resulting in a 5x2x3 factorial design. The application of T. harzianum only brought benefits to the control of brown rot when combined with the fungicide captan, at zero day shelf life. After two days, there was a greater skin darkening in peaches treated with T. harzianum compared with peaches without the treatment, except for peaches treated with the fungicide iprodione and T. harzianum The application of T. harzianum during postharvest showed no benefits for the control of brown rot, however, the association with fungicides reduced the incidence of Rhizopus stolonifer during the shelf life.

  12. BIODEGRADATION OF DDT [1,1,1-TRICHLORO-2,2-BIS(4- CHLOROPHENYL) ETHANE] BY THE WHITE ROT FUNGUS PHANEROCHAETE CHRYSOSPORIUM

    Science.gov (United States)

    Extensive biodegradation of 1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) by the white rot fungus Phanerochaete chrysosporium was demonstrated by disappearance and mineralization of [14C]DDT in nutrient nitrogen-deficient cultures. Mass balance studies demonstrated the form...

  13. BIODEGRATION OF 2,4,5-TRICHLOROPHENOXYACETIC ACID IN LIQUID CULTURE AND IN SOIL BY THE WHITE ROT FUNGUS PHANEROCHAETE CHRYSOSPORIUM

    Science.gov (United States)

    Extensive biodegradation of [14C]-2,4,5-trichlorophenoxyacetic acid ([[14C]-2,4,5-T) by the white rot fungus Phanerochaete chrysosporium was demonstrated in nutrient nitrogen-limited aqueous cultures and in [14C]-2,4,5-T-contaminated soil inoculat...

  14. Efeito de sanificantes no controle pós-colheita da podridão parda (Monilinia fructicola e da podridão mole (Rhizopus stolonifer em pêssegos Effect of sanitizing products on the postharvest control of brown rot (Monilinia fructicola and soft rot (Rhizopus stolonifer in peaches

    Directory of Open Access Journals (Sweden)

    Fabiana Marchi de Abreu

    2008-02-01

    fungus was inoculated over fruit injuries. None of the products was effective in controlling soft rot. Ozone gas at 0,1 mL L-1 was not effective in controlling brown or soft rots in peaches.

  15. Decolorization and biodegradation of congo red dye by a novel white rot fungus Alternaria alternata CMERI F6.

    Science.gov (United States)

    Chakraborty, Samayita; Basak, Bikram; Dutta, Subhasish; Bhunia, Biswanath; Dey, Apurba

    2013-11-01

    A novel white rot fungus Alternaria alternata CMERI F6 decolorized 99.99% of 600 mg/L congo red within 48 h in yeast extract-glucose medium at 25 °C, pH 5 and 150 rpm. Physicochemical parameters like carbon and nitrogen sources, temperature, pH and aeration were optimized to develop faster decolorization process. Dye decolorization rate was maximal (20.21 mg/L h) at 25 °C, pH 5, 150 rpm and 800 mg/L dye, giving 78% final decolorization efficiency. Scanning electron microscopy and X-ray Diffraction analysis revealed that the fungus become amorphous after dye adsorption. HPLC and FTIR analysis of the extracted metabolites suggested that the decolorization occurred through biosorption and biodegradation. Thermogravimetric analysis (TGA), differential thermal analysis (DTA) and acid-alkali and 70% ethanol treatment revealed the efficient dye retention capability of the fungus. The foregoing results justify the applicability of the strain in removal of congo red from textile wastewaters and their safe disposal. PMID:24034987

  16. Variation in oxalate and oxalate decarboxylase production by six species of brown and white rot fungi

    DEFF Research Database (Denmark)

    Hastrup, Anne Christine Steenkjær; Oliver, Jason; Howell, Caitlin;

    cell lumen where it quickly dissociates into hydrogen ions and oxalate, resulting in a pH decrease of the environment, and oxalate-cation complexes. Generally, brown rot fungi accumulate larger quantities of oxalic acid in the wood than white rot fungi. The amount of oxalic acid has been shown to vary...... significantly among strains of brown rot fungi and within strains in response to differing environmental conditions (Green and Clausen; Hastrup et al., 2006).  This variation is in part believed to be due to the level of oxalate decarboxylase (ODC). The enzyme breaks down oxalate into stoichiometric quantities...... of formic acid and CO2 (Makela et al., 2002). So far only a few species of brown rot fungi have been shown to accumulate this enzyme (Micales, 1995, Howell and Jellison, 2006).   The purpose of this study was to investigate the variation in the levels of soluble oxalate and total oxalate, in...

  17. Visualization of the mycelia of wood-rotting fungi by fluorescence in situ hybridization using a peptide nucleic acid probe.

    Science.gov (United States)

    Nakada, Yuji; Nakaba, Satoshi; Matsunaga, Hiroshi; Funada, Ryo; Yoshida, Makoto

    2013-01-01

    White rot fungus, Phanerochaete chrysosporium, and brown rot fungus, Postia placenta, grown on agar plates, were visualized by fluorescence in situ hybridization (FISH) using a peptide nucleic acid (PNA) probe. Mycelia grown on wood chips were also clearly detected by PNA-FISH following blocking treatment. To the best of our knowledge, this is the first report on the visualization of fungi in wood by FISH. PMID:23391931

  18. Culturable bacterial microflora associated with nectarine fruit and their potential for control of brown rot.

    Science.gov (United States)

    Janisiewicz, Wojciech J; Buyer, Jeffrey S

    2010-06-01

    Microflora of fruit surfaces have been the best source of antagonists against fungi causing postharvest decay of fruit. However, there is little information on microflora colonizing surfaces of fruits other than grape, apple, and citrus. We characterized bacterial microflora on nectarine fruit surfaces from the early stage of development until harvest. Identification of bacterial strains was made using MIDI (fatty acid methyl ester analysis) and Biolog systems. Biolog identified 35% and MIDI 53% of the strains. Thus results from MIDI were used to determine the frequency of occurrence of genera and species. The most frequently occurring genera were Curtobacterium (21.31%), followed by Pseudomonas (19.99%), Microbacterium (13.57%), Clavibacter (9.69%), Pantoea (6.59%), and Enterobacter (4.26%). The frequency of isolations of some bacteria - for example, the major pseudomonads (Pseudomonas syringae, Pseudomonas putida, and Pseudomonas savastanoi) or Pantoea agglomerans - tended to decline as fruit developed. As Pseudomonas declined, Curtobacterium became more dominant. Time of isolation was a significant factor in the frequency of occurrence of different bacteria, indicating succession of the genera. Throughput screening of the bacterial strains against Monilinia fructicola on nectarine fruit resulted in the detection of strains able to control brown rot. The 10 best-performing antagonistic strains were subjected to secondary screening. Four strains reduced decay severity by more than 50% (51.7%-91.4% reduction) at the high pathogen inoculum concentration of 105 conidia/mL. PMID:20657618

  19. Brown Rot Strikes Prunus Fruit: An Ancient Fight Almost Always Lost.

    Science.gov (United States)

    Oliveira Lino, Leandro; Pacheco, Igor; Mercier, Vincent; Faoro, Franco; Bassi, Daniele; Bornard, Isabelle; Quilot-Turion, Bénédicte

    2016-05-25

    Brown rot (BR) caused by Monilinia spp., has been an economic problem for the stone fruit market due to dramatic losses, mainly during the postharvest period. There is much literature about basic aspects of Monilinia spp. infection, which indicates that environment significantly influences its occurrence in the orchard. However, progress is needed to sustainably limit this disease: the pathogen is able to develop resistance to pesticides, and most of BR resistance research programs in plant models perish. Solving this problem becomes important due to the need to decrease chemical treatments and reduce residues on fruit. Thus, research has recently increased, exploring a wide range of disease control strategies (e.g., genetic, chemical, physical). Summarizing this information is difficult, as studies evaluate different Monilinia and Prunus model species, with diverse strategies and protocols. Thus, the purpose of this review is to present the diversity and distribution of agents causing BR, focusing on the biochemical mechanisms of Monilinia spp. infection both of the fungi and of the fruit, and report on the resistance sources in Prunus germplasm. This review comprehensively compiles the information currently available to better understand mechanisms related to BR resistance. PMID:27133976

  20. Role of brown-rot fungi in the bioremoval of azo dyes under different conditions

    Directory of Open Access Journals (Sweden)

    Naeem Ali

    2010-12-01

    Full Text Available The present study is vital to the understanding of bioremediation of structurally different azo dyes by some unusual Brown-rot fungi. Bioremoval of each dye (20 mg l-1 was tested in two different culture media under static and shaking conditions by taking inocula from different fungi. Fungal strains showed varying dyes removal abilities, though considerable high in case of Acid Red (AR 151(di-azo as compared to Orange (Or II (mono-azo. With an exception of Aspergillus tereus SA3, all the fungal isolates showed higher removal of dyes in SDB. Under static condition, the maximum decolorizing fungal strains were; Aspergillus flavus SA2 (67% and Alternaria spp. SA4 (57% in AR 151, while Penicillium spp. (34 and 33 % in Orange II, in SDB and STE, respectively. Bioremoval of dyes was considerably increased when experiments were shifted from static to shaking mode. It was specifically increased (% in; AR 151 (255 with Penicillium spp., Or II with A. flavus SA2 (112 and Alternaria spp. (111. The primary mechanism of dyes removal proved to be fungal biosorption. However, reduction of dyes (onto fungal with formation of their products (α. naphthol, sulphalinic acid and aniline furthermore revealed that dyes (specifically azo were actually biodegraded.

  1. The expansion of brown rot disease throughout Bolivia: possible role of climate change.

    Science.gov (United States)

    Castillo, José Antonio; Plata, Giovanna

    2016-05-01

    Bacterial wilt is a devastating plant disease caused by the bacterial pathogen Ralstonia solanacearum species complex and affects different crops. Bacterial wilt infecting potato is also known as brown rot (BR) and is responsible for significant economic losses in potato production, especially in developing countries. In Bolivia, BR affects up to 75% of the potato crop in areas with high incidence and 100% of stored potatoes. The disease has disseminated since its introduction to the country in the mid-1980s mostly through contaminated seed tubers. To avoid this, local farmers multiply seed tubers in highlands because the strain infecting potatoes cannot survive near-freezing temperatures that are typical in the high mountains. Past disease surveys have shown an increase in seed tubers with latent infection in areas at altitudes lower than 3000 m a.s.l. Since global warming is increasing in the Andes Mountains, in this work, we explored the incidence of BR in areas at altitudes above 3000 m a.s.l. Results showed BR presence in the majority of these areas, suggesting a correlation between the increase in disease incidence and the increase in temperature and the number of irregular weather events resulting from climate change. However, it cannot be excluded that the increasing availability of latently infected seed tubers has boosted the spread of BR. PMID:26991236

  2. Fine-Scale Genetic Structure of Monilinia fructicola During Brown Rot Epidemics Within Individual Peach Tree Canopies.

    Science.gov (United States)

    Everhart, S E; Scherm, H

    2015-04-01

    The purpose of this study was to determine the fine-scale genetic structure of populations of the brown rot pathogen Monilinia fructicola within individual peach tree canopies to better understand within-tree plant pathogen diversity and to complement previous work on spatiotemporal development of brown rot disease at the canopy level. Across 3 years in a total of six trees, we monitored disease development, collected isolates from every M. fructicola symptom during the course of the season, and created high-resolution three-dimensional maps of all symptom and isolate locations within individual canopies using an electromagnetic digitizer. Each canopy population (65 to 173 isolates per tree) was characterized using a set of 13 microsatellite markers and analyzed for evidence of spatial genetic autocorrelation among isolates during the epidemic phase of the disease. Results showed high genetic diversity (average uh=0.529) and high genotypic diversity (average D=0.928) within canopies. The percentage of unique multilocus genotypes within trees was greater for blossom blight isolates (78.2%) than for fruit rot isolates (51.3%), indicating a greater contribution of clonal reproduction during the preharvest epidemic. For fruit rot isolates, between 54.2 and 81.7% of isolates were contained in one to four dominant clonal genotypes per tree having at least 10 members. All six fruit rot populations showed positive and significant spatial genetic autocorrelation for distance classes between 0.37 and 1.48 m. Despite high levels of within-tree pathogen diversity, the contribution of locally available inoculum combined with short-distance dispersal is likely the main factor generating clonal population foci and associated spatial genetic clustering within trees. PMID:25317843

  3. Melanoidin-containing wastewaters induce selective laccase gene expression in the white-rot fungus Trametes sp. I-62.

    Science.gov (United States)

    González, Tania; Terrón, María Carmen; Yagüe, Susana; Junca, Howard; Carbajo, José María; Zapico, Ernesto Javier; Silva, Ricardo; Arana-Cuenca, Ainhoa; Téllez, Alejandro; González, Aldo Enrique

    2008-03-01

    Wastewaters generated from the production of ethanol from sugar cane molasses may have detrimental effects on the environment due to their high chemical oxygen demand and dark brown color. The color is mainly associated with the presence of melanoidins, which are highly recalcitrant to biodegradation. We report here the induction of laccases by molasses wastewaters and molasses melanoidins in the basidiomycetous fungus Trametes sp. I-62. The time course of effluent decolorization and laccase activity in the culture supernatant of the fungus were correlated. The expression of laccase genes lcc1 and lcc2 increased as a result of the addition of complete molasses wastewater and its high molecular weight fraction to fungal cultures. This is the first time differential laccase gene expression has been reported to occur upon exposure of fungal cultures to molasses wastewaters and their melanoidins. PMID:18248962

  4. Rice-Infecting Pseudomonas Genomes Are Highly Accessorized and Harbor Multiple Putative Virulence Mechanisms to Cause Sheath Brown Rot.

    Directory of Open Access Journals (Sweden)

    Ian Lorenzo Quibod

    Full Text Available Sheath rot complex and seed discoloration in rice involve a number of pathogenic bacteria that cannot be associated with distinctive symptoms. These pathogens can easily travel on asymptomatic seeds and therefore represent a threat to rice cropping systems. Among the rice-infecting Pseudomonas, P. fuscovaginae has been associated with sheath brown rot disease in several rice growing areas around the world. The appearance of a similar Pseudomonas population, which here we named P. fuscovaginae-like, represents a perfect opportunity to understand common genomic features that can explain the infection mechanism in rice. We showed that the novel population is indeed closely related to P. fuscovaginae. A comparative genomics approach on eight rice-infecting Pseudomonas revealed heterogeneous genomes and a high number of strain-specific genes. The genomes of P. fuscovaginae-like harbor four secretion systems (Type I, II, III, and VI and other important pathogenicity machinery that could probably facilitate rice colonization. We identified 123 core secreted proteins, most of which have strong signatures of positive selection suggesting functional adaptation. Transcript accumulation of putative pathogenicity-related genes during rice colonization revealed a concerted virulence mechanism. The study suggests that rice-infecting Pseudomonas causing sheath brown rot are intrinsically diverse and maintain a variable set of metabolic capabilities as a potential strategy to occupy a range of environments.

  5. Rice-Infecting Pseudomonas Genomes Are Highly Accessorized and Harbor Multiple Putative Virulence Mechanisms to Cause Sheath Brown Rot.

    Science.gov (United States)

    Quibod, Ian Lorenzo; Grande, Genelou; Oreiro, Eula Gems; Borja, Frances Nikki; Dossa, Gerbert Sylvestre; Mauleon, Ramil; Cruz, Casiana Vera; Oliva, Ricardo

    2015-01-01

    Sheath rot complex and seed discoloration in rice involve a number of pathogenic bacteria that cannot be associated with distinctive symptoms. These pathogens can easily travel on asymptomatic seeds and therefore represent a threat to rice cropping systems. Among the rice-infecting Pseudomonas, P. fuscovaginae has been associated with sheath brown rot disease in several rice growing areas around the world. The appearance of a similar Pseudomonas population, which here we named P. fuscovaginae-like, represents a perfect opportunity to understand common genomic features that can explain the infection mechanism in rice. We showed that the novel population is indeed closely related to P. fuscovaginae. A comparative genomics approach on eight rice-infecting Pseudomonas revealed heterogeneous genomes and a high number of strain-specific genes. The genomes of P. fuscovaginae-like harbor four secretion systems (Type I, II, III, and VI) and other important pathogenicity machinery that could probably facilitate rice colonization. We identified 123 core secreted proteins, most of which have strong signatures of positive selection suggesting functional adaptation. Transcript accumulation of putative pathogenicity-related genes during rice colonization revealed a concerted virulence mechanism. The study suggests that rice-infecting Pseudomonas causing sheath brown rot are intrinsically diverse and maintain a variable set of metabolic capabilities as a potential strategy to occupy a range of environments. PMID:26422147

  6. Quantitative relationships between different injury factors and development of brown rot caused by Monilinia fructigena in integrated and organic apple orchards.

    Science.gov (United States)

    Holb, I J; Scherm, H

    2008-01-01

    In a 4-year study, the incidence of various types of injuries (caused by insects, birds, growth cracks, mechanical wounding, and other, unidentified factors) was assessed in relation to brown rot development (caused by Monilinia fructigena) on fruit of three apple cultivars (Prima, Jonathan, and Mutsu) in integrated and organic blocks of two apple orchards in Hungary. In addition, populations of male codling moths (Cydia pomonella) were monitored with pheromone traps season-long in both management systems. On average, injury incidence on fruit at harvest was 6.1 and 19.2% in the integrated and organic treatments, respectively. Insect injury, which was caused primarily by C. pomonella, had the highest incidence among the five injury types, accounting for 79.4% of the total injury by harvest in the organic blocks and 36.6% in the integrated blocks. Levels of all other injury types remained close to zero during most of the season, but the incidence of bird injury and growth cracks increased markedly in the final 3 to 5 weeks before harvest in both production systems. Brown rot developed more slowly and reached a lower incidence in the integrated (6.4% final incidence on average) compared with the organic blocks (20.1% average incidence). In addition, the disease developed later but attained higher levels as the cultivar ripening season increased from early-maturing Prima to late-maturing Mutsu. Overall, 94.3 to 98.7% of all injured fruit were also infected by M. fructigena, whereas the incidence of brown-rotted fruit without visible injury was very low (0.8 to 1.6%). Correlation coefficients (on a per plot basis) and association indices (on a per-fruit basis) were calculated between brown rot and the various injury types for two selected assessment dates 4 weeks preharvest and at harvest. At both dates, the strongest significant (P < 0.05) relationships were observed between brown rot and insect injury and between brown rot and the cumulative number of trapped C

  7. Irpex lacteus, a white-rot fungus with biotechnological potential — review

    Czech Academy of Sciences Publication Activity Database

    Novotný, Čeněk; Cajthaml, Tomáš; Svobodová, Kateřina; Šušla, Martin; Šašek, Václav

    2009-01-01

    Roč. 5, č. 5 (2009), s. 375-390. ISSN 0015-5632 R&D Projects: GA AV ČR IAAX00200901 Institutional research plan: CEZ:AV0Z50200510 Keywords : White-rot fungi * degradation * irpex lacteus Subject RIV: EE - Microbiology, Virology Impact factor: 0.978, year: 2009

  8. Isolation and characterization of novel pI 4.8 MnP isoenzyme from white-rot fungus Irpex lacteus

    Czech Academy of Sciences Publication Activity Database

    Sklenář, Jan; Niku-Paavola, M.; L.; Santos, S.; Man, Petr; Kruus, K.; Novotný, Čeněk

    2010-01-01

    Roč. 46, č. 7 (2010), s. 550-556. ISSN 0141-0229 R&D Projects: GA AV ČR IAAX00200901; GA ČR GP310/08/P258; GA MŠk LC06066 Institutional research plan: CEZ:AV0Z50200510 Keywords : Solid-support growth * White-rot fungus * Irpex lacteus Subject RIV: EE - Microbiology, Virology Impact factor: 2.287, year: 2010

  9. Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation.

    Science.gov (United States)

    Min, Byoungnam; Park, Hongjae; Jang, Yeongseon; Kim, Jae-Jin; Kim, Kyoung Heon; Pangilinan, Jasmyn; Lipzen, Anna; Riley, Robert; Grigoriev, Igor V; Spatafora, Joseph W; Choi, In-Geol

    2015-10-10

    Schizopora paradoxa KUC8140 is a white rot wood degrader commonly found in Korea. Tolerance to heavy metals and polycyclic aromatic hydrocarbons and dye decolorization activity make this strain a potential candidate for mycoremediation. We report the genome sequence of S. paradoxa KUC8140 containing 44.4Mbp. Based on ab initio gene prediction, homology search and RNA-seq, total 17,098 gene models were annotated. We identified 17 lignin-modifying peroxidases and other 377 carbohydrate-active enzymes for modeling lignocellulose deconstruction and mycoremediation. PMID:26188242

  10. Phylogeny and population structure of brown rot- and Moko disease-causing strains of Ralstonia solanacearum phylotype II.

    Science.gov (United States)

    Cellier, G; Remenant, B; Chiroleu, F; Lefeuvre, P; Prior, P

    2012-04-01

    The ancient soilborne plant vascular pathogen Ralstonia solanacearum has evolved and adapted to cause severe damage in an unusually wide range of plants. In order to better describe and understand these adaptations, strains with very similar lifestyles and host specializations are grouped into ecotypes. We used comparative genomic hybridization (CGH) to investigate three particular ecotypes in the American phylotype II group: (i) brown rot strains from phylotypes IIB-1 and IIB-2, historically known as race 3 biovar 2 and clonal; (ii) new pathogenic variants from phylotype IIB-4NPB that lack pathogenicity for banana but can infect many other plant species; and (iii) Moko disease-causing strains from phylotypes IIB-3, IIB-4, and IIA-6, historically known as race 2, that cause wilt on banana, plantain, and Heliconia spp. We compared the genomes of 72 R. solanacearum strains, mainly from the three major ecotypes of phylotype II, using a newly developed pangenomic microarray to decipher their population structure and gain clues about the epidemiology of these ecotypes. Strain phylogeny and population structure were reconstructed. The results revealed a phylogeographic structure within brown rot strains, allowing us to distinguish European outbreak strains of Andean and African origins. The pangenomic CGH data also demonstrated that Moko ecotype IIB-4 is phylogenetically distinct from the emerging IIB-4NPB strains. These findings improved our understanding of the epidemiology of important ecotypes in phylotype II and will be useful for evolutionary analyses and the development of new DNA-based diagnostic tools. PMID:22286995

  11. The application of laser microdissection to in planta gene expression profiling of the maize anthracnose stalk rot fungus Colletotrichum graminicola.

    Science.gov (United States)

    Tang, Weihua; Coughlan, Sean; Crane, Edmund; Beatty, Mary; Duvick, Jon

    2006-11-01

    Laser microdissection (LM) offers a potential means for deep sampling of a fungal plant-pathogen transcriptome during the infection process using whole-genome DNA microarrays. The use of a fluorescent protein-expressing fungus can greatly facilitate the identification of fungal structures for LM sampling. However, fixation methods that preserve both tissue histology and protein fluorescence, and that also yield RNA of suitable quality for microarray applications, have not been reported. We developed a microwave-accelerated acetone fixation, paraffin-embedding method that fulfills these requirements and used it to prepare mature maize stalk tissues infected with an Anemonia majano cyan fluorescent protein-expressing isolate of the anthracnose stalk rot fungus Colletotrichum graminicola. We successfully used LM to isolate individual maize cells associated with C. graminicola hyphae at an early stage of infection. The LM-derived RNA, after two-round linear amplification, was of sufficient quality and quantity for global expression profiling using a fungal microarray. Comparing replicated LM samples representing an early stage of stalk cell infection with samples from in vitro-germinated conidia, we identified 437 and 370 C. graminicola genes showing significant up- or downregulation, respectively. We confirmed the differential expression of several representative transcripts by quantitative reverse-transcriptase polymerase chain reaction (RT-PCR) and documented extensive overlap of this dataset with a PCR-subtraction library enriched for C. graminicola transcripts in planta. Our results demonstrate that LM is feasible for in planta pathogen expression profiling and can reveal clues about fungal genes involved in pathogenesis. The method in this report may be advantageous for visualizing a variety of cellular features that depend on a high degree of histochemical preservation and RNA integrity prior to LM. PMID:17073306

  12. Growth Inhibition of Cocoa Pod Rot Fungus Phytophthora palmivora byPseudomonas fluorescence and Bacillus subtilis bacteria

    Directory of Open Access Journals (Sweden)

    Sakti Widyanta Pratama

    2013-08-01

    Full Text Available Black pod disease caused by Phytophthora palmivorafungus is one of the important diseases on cocoa crop. Pod rot is the most important disease because it may cause loss of cocoa pod. Until now, the fungal pathogen of cocoa black pod disease is still a crucial problem and there is no fungicide that is really effective against the disease. One alternative to control the cocoa black pod disease is by using biological agents as biofungicide, including utilizing Pseudomonas fluorescenceand Bacillus subtilis bacteria. The research was done by isolation of P. palmivora from infected pods of Kaliwining Experimental Station to obtain pure cultures of fungus and by multiplication of P. fluorescence and B. subtilis. Antagonist test was performed by inoculating P. palmivora into a petri dish in a distance of 3 cm from the edge. P. fluorescenceand B. Subtilis were inoculated into petridishes in three days after the fungal treatment. Control was inoculated with isolate of P. palmivora only. Fungal growth was measured everyday by measuring radius of fungal colonies first time 24 hours after inoculation. Growth of Phytophthora palmivora in the two treatmens were used to calculate the percentage of inhibition. The results of this study indicated that P. fluorescence and B. subtiliswere able to inhibit fungal growth of P. palmivora. Both bacterial antagonists had the same effectiveness in inhibiting the growth of P. palmivora fungus based on the percentage of inhibition and effectiveness criteria. Based on the results of translucent zones indicated that B. subtiliswas more powerfull in inhibiting growth of P. Palmivora compared to P. fluorescence. Key words: Black pod disease of cocoa, biological control, Phytophthora palmivora, Pseudomonas fluorescence, Bacillus subtilis

  13. [Extracellular polymeric substances (EPS) of white-rot fungus and their effects on Pb2+ adsorption by biomass].

    Science.gov (United States)

    Wang, Liang; Chen, Gui-Qiu; Zeng, Guang-Ming; Zhang, Wen-Juan; Fan, Jia-Qi; Shen, Guo-Li

    2011-03-01

    The extracellular polymeric substances (EPS) of P. chrysosporium and their effects on Pb2+ biosorption were studied. The product, composition of EPS and the effects on Pb2+ biosorption capacity were investigated in lab via flask experiments. The surface changes of mycelium before and after EPS extraction, before and after Pb2+ adsorption were researched by environment scanning electron microscope with energy-dispersive X-ray analysis (ESEM-EDX). Results showed that at 113 h, the maximum yield of EPS was 125.5 mg/L, which contained 46.6% - 54.3% of sugar and 31.2% - 35.1% of protein. The results of control test after EPS extraction displayed a decrease of biosorption capacity of Pb2+ among 2.12 mg/g (113 h) - 7.73 mg/g (41 h). The results of environment scanning electron microscope (ESEM) showed that the EPS extraction affected the cell wall of white-rot fungus and the Pb-contained globular particle after Pb2+ uptake, which was very useful for further study on heavy metal biosorption mechanism. PMID:21634177

  14. Production of Ligninolytic Enzymes by White-Rot Fungus Datronia sp. KAPI0039 and Their Application for Reactive Dye Removal

    Directory of Open Access Journals (Sweden)

    Pilanee Vaithanomsat

    2010-01-01

    Full Text Available This study focused on decolorization of 2 reactive dyes; Reactive Blue 19 (RBBR and Reactive Black 5 (RB5, by selected white-rot fungus Datronia sp. KAPI0039. The effects of reactive dye concentration, fungal inoculum size as well as pH were studied. Samples were periodically collected for the measurement of color unit, Laccase (Lac, Manganese Peroxidase (MnP, and Lignin Peroxidase (LiP activity. Eighty-six percent of 1,000 mg L−1 RBBR decolorization was achieved by 2% (w/v Datronia sp. KAPI0039 at pH 5. The highest Lac activity (759.81 UL−1 was detected in the optimal condition. For RB5, Datronia sp. KAPI0039 efficiently performed (88.01% decolorization at 2% (w/v fungal inoculum size for the reduction of 600 mg L−1 RB5 under pH 5. The highest Lac activity (178.57 UL−1 was detected, whereas the activity of MnP and LiP was absent during this hour. The result, therefore, indicated that Datronia sp. KAPI0039 was obviously able to breakdown both reactive dyes, and Lac was considered as a major lignin-degradation enzyme in this reaction.

  15. Enhanced decolorization of Solar brilliant red 80 textile dye by an indigenous white rot fungus Schizophyllum commune IBL-06.

    Science.gov (United States)

    Asgher, Muhammad; Yasmeen, Qamar; Iqbal, Hafiz Muhammad Nasir

    2013-10-01

    An indigenously isolated white rot fungus, Schizophyllum commune IBL-06 was used to decolorize Solar brilliant red 80 direct dye in Kirk's basal salts medium. In initial screening study, the maximum decolorization (84.8%) of Solar brilliant red 80 was achieved in 7 days shaking incubation period at pH 4.5 and 30 °C. Different physical and nutritional factors including pH, temperature and fungal inoculum density were statistically optimized through Completely Randomized Design (CRD), to enhance the efficiency of S. commune IBL-06 for maximum decolorization of Solar brilliant red 80 dye. The effects of inexpensive carbon and nitrogen sources were also investigated. Percent dye decolorization was determined by a reduction in optical density at the wavelength of maximum absorbance (λ max, 590 nm). Under optimum conditions, the S. commune IBL-06 completely decolorized (100%) the Solar brilliant red 80 dye using maltose and ammonium sulfate as inexpensive carbon and nitrogen sources, respectively in 3 days. S. commune IBL-06 produced the three major ligninolytic enzymes lignin peroxidase (LiP), manganase peroxidase (MnP) and lacaase (Lac) during the decolorization of Solar brilliant red 80. LiP was the major enzyme (944 U/mL) secreted by S. commune IBL-06 along with comparatively lower activities of MnP and Laccase. PMID:24235871

  16. Effects of selenium oxyanions on the white-rot fungus Phanerochaete chrysosporium

    KAUST Repository

    Espinosa-Ortiz, Erika J.

    2014-10-24

    The ability of Phanerochaete chrysosporium to reduce the oxidized forms of selenium, selenate and selenite, and their effects on the growth, substrate consumption rate, and pellet morphology of the fungus were assessed. The effect of different operational parameters (pH, glucose, and selenium concentration) on the response of P. chrysosporium to selenium oxyanions was explored as well. This fungal species showed a high sensitivity to selenium, particularly selenite, which inhibited the fungal growth and substrate consumption when supplied at 10 mg L−1 in the growth medium, whereas selenate did not have such a strong influence on the fungus. Biological removal of selenite was achieved under semi-acidic conditions (pH 4.5) with about 40 % removal efficiency, whereas less than 10 % selenium removal was achieved for incubations with selenate. P. chrysosporium was found to be a selenium-reducing organism, capable of synthesizing elemental selenium from selenite but not from selenate. Analysis with transmission electron microscopy, electron energy loss spectroscopy, and a 3D reconstruction showed that elemental selenium was produced intracellularly as nanoparticles in the range of 30–400 nm. Furthermore, selenite influenced the pellet morphology of P. chrysosporium by reducing the size of the fungal pellets and inducing their compaction and smoothness.

  17. Cloning, expression and characterization of an aryl-alcohol dehydrogenase from the white-rot fungus Phanerochaete chrysosporium strain BKM-F-1767

    Directory of Open Access Journals (Sweden)

    Yang Dong-Dong

    2012-06-01

    Full Text Available Abstract Background The white-rot fungus Phanerochaete chrysosporium is among the small group of fungi that can degrade lignin to carbon dioxide while leaving the crystalline cellulose untouched. The efficient lignin oxidation system of this fungus requires cyclic redox reactions involving the reduction of aryl-aldehydes to the corresponding alcohols by aryl-alcohol dehydrogenase. However, the biochemical properties of this enzyme have not been extensively studied. These are of most interest for the design of metabolic engineering/synthetic biology strategies in the field of biotechnological applications of this enzyme. Results We report here the cloning of an aryl-alcohol dehydrogenase cDNA from the white-rot fungus Phanerochaete chrysosporium, its expression in Escherichia coli and the biochemical characterization of the encoded GST and His6 tagged protein. The purified recombinant enzyme showed optimal activity at 37°C and at pH 6.4 for the reduction of aryl- and linear aldehydes with NADPH as coenzyme. NADH could also be the electron donor, while having a higher Km (220 μM compared to that of NADPH (39 μM. The purified recombinant enzyme was found to be active in the reduction of more than 20 different aryl- and linear aldehydes showing highest specificity for mono- and dimethoxylated Benzaldehyde at positions 3, 4, 3,4 and 3,5. The enzyme was also capable of oxidizing aryl-alcohols with NADP + at 30°C and an optimum pH of 10.3 but with 15 to 100-fold lower catalytic efficiency than for the reduction reaction. Conclusions In this work, we have characterized the biochemical properties of an aryl-alcohol dehydrogenase from the white-rot fungus Phanerochaete chrysosporium. We show that this enzyme functions in the reductive sense under physiological conditions and that it displays relatively large substrate specificity with highest activity towards the natural compound Veratraldehyde.

  18. The root rot fungus Armillaria mellea introduced into South Africa by early Dutch settlers.

    Science.gov (United States)

    Coetzee, M P; Wingfield, B D; Harrington, T C; Steimel, J; Coutinho, T A; Wingfield, M J

    2001-02-01

    Dead and dying oak (Quercus) and numerous other woody ornamental trees and shrubs showing signs and symptoms of Armillaria root rot were identified in the Company Gardens, Cape Town, South Africa, which were established in the mid-1600s by the Dutch East Indies Trading Company. Nineteen isolates from dying trees or from mushrooms were collected and analysed to identify and characterize the Armillaria sp. responsible for the disease. The AluI digestion of the amplified product of the first intergenic spacer region (IGS-1) of the rRNA operon of 19 isolates from the Company Gardens was identical to that of some of the European isolates of A. mellea s. s. The IGS-1 region and the internal transcribed spacers (ITS) were sequenced for some of the Cape Town isolates. Phylogenetic analyses placed the Cape Town isolates in the European clade of A. mellea, which is distinct from the Asian and North American clades of this species. Identification based on sexual compatibility was conducted using A. mellea tester strains in diploid-haploid pairings, which showed some compatibility between the Cape Town isolates and testers from Europe. Somatic compatibility tests (diploid-diploid pairings) and DNA fingerprinting with multilocus, microsatellite probes indicated that the Cape Town isolates were genetically identical and may have resulted from vegetative (clonal) spread from a single focus in the centre of the original Company Gardens (c. 1652). The colonized area is at least 345 m in diameter. Assuming a linear spread rate underground of 0.3 m/year to 1.6 m/year, the genet (clone) was estimated to be between 108 and 575 years old. These data suggest that A. mellea was introduced into Cape Town from Europe, perhaps on potted plants, such as grapes or citrus, planted in the Company Gardens more than 300 years ago. PMID:11298953

  19. Identification of the pathogen causing brown rot of Hylocereus undatus%霸王花褐腐病的病原鉴定

    Institute of Scientific and Technical Information of China (English)

    蓝国兵; 何自福; 罗方芳; 汤亚飞; 佘小漫; 杜振国

    2014-01-01

    [目的]明确导致广东省霸王花Hylocereus undatus褐腐病的病原种类.[方法]通过病组织分离、致病性测定、形态学观察及rDNA序列分析等方法对广东省霸王花褐腐病病原进行了种类鉴定.[结果和结论]在PDA培养基上,病原菌的菌落为深灰色,绒毛状.产生2种类型的节孢子:一种为浅色、薄壁的柱状孢子,大小为(5.00~10.69)μm ×(2.61~4.52)μm;另一种为褐色、厚壁、圆形或椭圆形、基部平截、成链的孢子,大小为(5.15~12.39)μm ×(3.87~6.07)μm.应用真菌通用引物ITS1和ITS4进行PCR,获得该病原菌579 bp的18S-28S rDNA ITS序列. BLAST结果显示,该序列与Neoscytalidium dimidiatum火龙果菌株的18S-28S rDNA ITS序列相似性最高,为99%~100%.这些研究结果表明,引起广东省霸王花褐腐病的病原菌为N.dimidiatum.%[Objective] To confirm the pathogen species that caused brown rot disease on Hylocereus unda-tus.[Method] Diseased tissue isolation , indoor pathogenicity test , morphological observation and rDNA sequence analysis were used to confirm the pathogen species .[Result and conclusion] The colonies of the fungus were dark grey and fluffy on potato dextrose agar ( PDA) medium.Two kinds of arthrospore were observed on PDA medium .One was columnar conidium with light-colored , thin-walled and (5.00-10.69) μm ×(2.61-4.52) μm in size, and the other was chained conidium with dark brown , thick-walled , circular or oval , base truncate and ( 5.15 -12.39 ) μm ×( 3.87 -6.07 ) μm in size .Using PCR with primers ITS1 and ITS4 for internal transcribed spacer (ITS) sequences of fungal 18S-28S rD-NA, the sequence was cloned to be 579 bp in length.The BLAST results showed that the sequence had the highest sequence identity with that of Neoscytalidium dimidiatum strains isolated from pitahaya (99%-100%).These results indicated that night-blooming cereus brown rot in Guangdong was

  20. A DNA based method to detect the grapevine root-rotting fungus Roesleria subterranea in soil and root samples.

    Science.gov (United States)

    Neuhauser, Sigrid; Huber, Lars; Kirchmair, Martin

    2009-08-01

    Roesleria subterranea causes root rot in grapevine and fruit trees. The fungus has long been underestimated as a weak parasite, but during the last years it has been reported to cause severe damages in German vineyards. Direct, observation-based detection of the parasite is time consuming and destructive, as large parts of the rootstocks have to be uprooted and screened for the tiny, stipitate, hypogeous ascomata of R. subterranea. To facilitate rapid detection in vineyards, protocols to extract DNA from soil samples and grapevine roots, and R.-subterranea-specific PCR primers were designed. Twelve DNA-extraction protocols for soil samples were tested in small-scale experiments, and selected parameters were optimised. A protocol based on ball-mill homogenization, DNA extraction with SDS, skim milk, chloroform, and isopropanol, and subsequent purification of the raw extracts with PVPP-spin-columns was most effective. This DNA extraction protocol was found to be suitable for a wide range of soil-types including clay, loam and humic-rich soils. For DNA extraction from grapevine roots a CTAB-based protocol was more reliable for various grapevine rootstock varieties. Roesleria-subterranea-specific primers for the ITS1-5.8S-ITS2 rDNA-region were developed and tested for their specificity to DNA extracts from eleven R. subterranea strains isolated from grapevine and fruit trees. No cross reactions were detected with DNA extracts from 44 different species of fungi isolated from vineyard soils. The sensitivity of the species-specific primers in combination with the DNA extraction method for soil was high: as little as 100 fg μl(-1)R.-subterranea-DNA was sufficient for a detection in soil samples and plant material. Given that specific primers are available, the presented method will also allow quick and large-scale testing for other root pathogens. PMID:21442023

  1. Molecular detection of Monilinia fructigena as causal agent of brown rot on quince

    OpenAIRE

    Jovana Hrustić; Mila Grahovac; Milica Mihajlović; Goran Delibašić; Mirko Ivanović; Mihailo Nikolić; Brankica Tanović

    2012-01-01

    Species of the genus Monilinia are important causal agents of fruit rot on pome and stone fruits in Serbia. The pathogen is very harmful, especially on small properties and cottage plantations where intensive control measures are not applied. Quince is important host for the pathogens of this genus. During spring 2010, intensive occurrence of mummified fruits overwintering on branches of the quince was observed. The pathogen was isolated using standard phyt...

  2. Biotransformation of (-)-α-pinene and geraniol to α-terpineol and p-menthane-3,8-diol by the white rot fungus, Polyporus brumalis.

    Science.gov (United States)

    Lee, Su-Yeon; Kim, Seon-Hong; Hong, Chang-Young; Park, Se-Yeong; Choi, In-Gyu

    2015-07-01

    In this study, the monoterpenes, α-pinene and geraniol, were biotransformed to synthesize monoterpene alcohol compounds. Polyporus brumalis which is classified as a white rot fungus was used as a biocatalyst. Consequently α-terpineol was synthesized from α-pinene by P. brumalis mycelium, after three days. Moreover, another substrate, the acyclic monoterpenoids geraniol was transformed into the cyclic compound, p-menthane-3, 8-diol (PMD). The main metabolites, i.e., α-terpineol and PMD, are known to be bioactive monoterpene alcohol compounds. This study highlights the potential of fungal biocatalysts for monoterpene transformation. PMID:26115995

  3. 大白菜褐腐病(茎基腐病)的病原菌鉴定%Pathogen Identification of Chinese Cabbage Brown Rot (Base Stem Rot)

    Institute of Scientific and Technical Information of China (English)

    周慧敏; 谢学文; 石延霞; 郭英兰; 李宝聚

    2012-01-01

    In 2011, the disease known as ' base stem rot' of Chinese cabbage [ Brassica campestris L. ssp. pekinensis ( Lour) Olsson ] was prevalent in Beijing, Hebei and Jiangsu Provinces. 12 fungi isolates were collected from rotten stem of Chinese cabbage. The morphological identification show the isolated bacteria strain is Rhizoctonia solani. PCR of rDNA-ITS was propagated by general primer ITS1/ITS4 and the sequencing result was compared and analyzed in GenBank. The results of molecular identification and morphological identification were the same. Then the isolated bacteria strains were inoculated to the healthy Chinese cabbage stems. The symptoms resembled the ones originally observed in the fields. Finally, the pathogen's identity was confirmed by re-isolation from lesions of infected plants. Based on the tests of morphological characteristics, pathogenicity and molecular biology, the pathogens of Chinese cabbage' base stem rot' found in Beijing, Hebei and Jiangsu Provinces were the same as brown rot, Rhizoctonia solani. etc.%2011年在北京、河北、江苏等地的部分大白菜种植区,当地俗称的大白菜“茎基腐病”普遍严重发生,实际调查后共采集到大白菜“茎基腐病”病样12份,分离获得12个真菌分离物,经形态学鉴定,分离到的菌株均为立枯丝核菌Rhizoctonia solani;采用真菌通用引物ITS1/ITS4对病原菌rDNA-ITS进行PCR扩增,并将测序结果在GenBank中进行同源性比对分析,分子生物学鉴定结果与形态学鉴定结果一致.将分离到的菌株分别回接健康的大白菜植株,植株表现出与田间相似的发病症状,重新进行病原菌的分离,得到相同的病原物.基于形态学、分子生物学鉴定和致病性试验最终确定北京、河北、江苏等地大白菜“茎基腐病”病原菌为立枯丝核菌Rhizoctonia solani,大白菜“茎基腐病”与大白菜褐腐病、大白菜立枯病属同病异名.

  4. Evaluation of technical scenarios for the peach-brown rot system using a virtual fruit model simulating quality and storage potential

    OpenAIRE

    GIBERT, CAROLINE; Rouet, Pierre; Bruchou, Claude; Vercambre, Gilles; Génard, Michel; Plénet, Daniel; Nicot, Philippe; Chadoeuf, Joel; Lescourret, Francoise

    2010-01-01

    Improving fruit quality while reducing pesticide and water use supports both consumers’ requirements and environmental and health concerns. This objective promotes some alternative technical scenarios that use more cultural than chemical control for pest management. Our study focused on the peach-brown rot system (Monilinia laxa). It aims at determining sets of cultural options providing an optimal trade-off between revenue build-up, consumers’ requirements and environmental impacts. We used ...

  5. CHARACTERIZATION OF WOOD DECAY BY ROT FUNGI USING COLORIMETRY AND INFRARED SPECTROSCOPY

    Directory of Open Access Journals (Sweden)

    Mírian de Almeida Costa

    2011-09-01

    Full Text Available Wood samples of marupá (Simarouba amara and andiroba (Carapa guianenis were submitted to Trametes versicolor (white rot and Gloeophylum trabeum (brown rot fungi attack. Colorimetry was used to determine the color of the wood before and after wood decaying fungi. To evaluate the changes in chemical compounds levels in the wood samples, the diffuse reflectance medium infrared spectroscopy was used. Both wood were non resistant against white rot fungus, while with brown rot attack andiroba was resistant and marupá was not. After Gloeophyllum trabeum attack both woods changed to a darken color, and after Trametes versicolor attack andiroba changed to a lighter color and marupá darkened slightly, The analysis showed a reduction in the peak intensity of cellulose, hemicellulose and lignin, for both species, after Trametes versicolor attack and a reduction in the peak intensity of cellulose after Gloeophyllum trabeum attack.

  6. Chemical changes of kraft lignin and some enzymes produced by the white-rot fungus Coriolopsis Gallica

    OpenAIRE

    Gómez Alarcón, Gonzalo; Sáiz-Jiménez, Cesáreo; Lahoz, Rafael; O'Connor, A

    1987-01-01

    The excretion of extracellular enzymes and the degradation of indulin (pine kraft lignin) by the fungus Coriolopsis gallica were studied. By using a lignin-impregnated glass fibre disc which simulated natural conditions, the fungus excreted phenol oxidases during the log phase of growth and reached two activity maxima in the autolytic phase. However, in absence of indulin the fungus had a different behaviour with respect to phenol oxidases. It was concluded that in the ex...

  7. Enhanced bioprocessing of lignocellulose: Wood-rot fungal saccharification and fermentation of corn fiber to ethanol

    Science.gov (United States)

    Shrestha, Prachand

    no improvement in ethanol yields. We showed that saccharification of lignocellulosic material with a wood-rot fungal process is quite feasible. Corn fiber from wet milling was best degraded to sugars using aerobic solid state fermentation with the soft-rot fungus T. reesei. However, it was shown that both the white-rot fungus P. chrysosporium and brown-rot fungus G. trabeum had the ability to produce additional consortia of hemi/cellulose degrading enzymes. It is likely that a consortium of enzymes from these fungi would be the best approach in saccharification of lignocellulose. In all cases, a subsequent anaerobic yeast process under submerged conditions is required to ferment the released sugars to ethanol. To our knowledge, this is the first time report on production of cellulolytic enzymes from wet-milled corn fiber using white- and brown-rot fungi for sequential fermentation of corn fiber hydrolyzate to ethanol. Keywords: lignocellulose, ethanol, biofuel, bioeconomy, biomass, renewable resources, corn fiber, pretreatment, solid-substrate fermentation, simultaneous saccharification and fermentation (SSF), white-rot fungus, brown-rot fungus, soft-rot fungus, fermentable sugars, enzyme activities, cellulytic enzymes Phanerochaete chrysosporium, Gloleophyllum trabeum, Trichoderma reesei, Saccharomyces cerevisiae.

  8. Effect of chemical factors on integrated fungal fermentation of sugarcane bagasse for ethanol production by a white-rot fungus, Phlebia sp. MG-60.

    Science.gov (United States)

    Khuong, Le Duy; Kondo, Ryuichiro; De Leon, Rizalinda; Anh, To Kim; Meguro, Sadatoshi; Shimizu, Kuniyoshi; Kamei, Ichiro

    2014-09-01

    Bioethanol production through integrated fungal fermentation (IFF), involving a unified process for biological delignification with consolidated biological processing by the white-rot fungus Phlebia sp. MG-60, was applied to sugarcane bagasse. Initial moisture content of the bagasse was found to affect biological delignification by MG-60, and 75% moisture content was suitable for selective lignin degradation and subsequent ethanol production. Additives, such as basal media, organic compounds, or minerals, also affected biological delignification of bagasse by MG-60. Basal medium addition improved both delignification and ethanol production. Some inorganic chemical factors, such as Fe(2+), Mn(2+), or Cu(2+), reduced bagasse carbohydrate degradation by MG-60 during delignifying incubations and resulted in increased ethanol production. The present results indicated that suitable culture conditions could significantly improve IFF efficiency. PMID:24968109

  9. Resistência à podridão parda em pessegueiro Resistance to brown rot in peach plants

    Directory of Open Access Journals (Sweden)

    Juliano dos Santos

    2012-01-01

    Full Text Available A podridão parda, causada por Monilinia fructicola, é a mais importante doença fúngica do pessegueiro, principalmente em áreas quentes e úmidas, como a região produtora de pêssegos no Sul do Brasil. A resistência genética é a forma mais eficiente de controle da doença, além de reduzir o custo de produção e o impacto ambiental. A cultivar Bolinha, considerada padrão de resistência à doença, produz frutos de baixa qualidade e suas flores não têm a mesma resistência ao fungo. Este trabalho teve como objetivo buscar novas fontes de resistência a esta doença. Além da cultivar Bolinha, foram submetidos à inoculação com suspensão de 1 x 10(5 conídios mL-1 do patógeno, flores de 11 seleções de pessegueiro, frutos de 12 seleções e 20 plantas de cinco "seedlings" oriundos de hibridações. Os resultados indicaram que a seleção Conserva 930 e a cultivar Jubileu foram as que tiveram maior nível de resistência nas flores. Frutos das seleções Conserva 1798, Conserva 1596, Conserva 1218 e Cascata 1493 proporcionaram níveis de resistência semelhantes aos da cultivar Bolinha, e destas, apenas a Conserva 1798 manteve o mesmo desempenho em estádio mais avançado de infecção por M. fructicola.Brown rot, caused by Monilinia fructicola, is the most important peach disease, especially in warm humid areas such as the production area in Southern Brazil. Genetic resistance is the most efficient way for controlling this disease, reducing production costs and environmental problems. The Bolinha cultivar, considered as resistant standard, produces fruits of low quality and is not resistant to blossom blight. The objective of this study was to find new resistance sources to brown rot. Besides Bolinha cultivar, flowers of 11 selections, fruits of 12 selections, and 20 seedlings from hybrid progenies were inoculated with a suspension of conidia of M. fructicola. The results indicated that Conserva 930 and Jubileu cultivar showed

  10. 桑叶褐斑病病原菌的生物学特性研究%Bilolgical Characteristics of Pathogenic Fungus Causing Brown Spot on Mulberry Leaves

    Institute of Scientific and Technical Information of China (English)

    吴庭观; 章一鸣; 叶政平; 何永宏; 张泽; 徐升胜; 洪逗

    2014-01-01

    Through cultivating pathogenic fungi of mulberry brown rot disease under 6 conditions such as different media, temperature, carbon source and nitrogen source after 6 days, research on the biological characteristics of pathogenic fungus causing brown spot on mulberry leaves was conducted .The results showed that nutrition , tem-perature and pH had significant influence on mycelial growth . It was found that the best medium for mycelial growth was oatmeal medium , the proper temperature was 20~30℃, the optimal temperature for mycelial growth was 25℃, the light had no obvious promotion effect on mycelial growth .It was also found that the optimal pH was 9 to 10 , the best carbon source and nitrogen source for mycelial grow are α-Galoctaose and Carbamide , and the mycelial could not survive above 55℃more than 10 min.%通过对桑叶褐斑病病原菌在不同种类培养基培养、不同氮源与碳源、不同温度等6种条件下培养6天后,测定菌落直径,观察菌丝颜色和菌落形态,分析了桑褐斑病病原菌的生物学特性。结果表明,在室内培养条件下,不同的营养成分、 pH值、温度、光照都对菌丝的生长有影响。病原菌菌丝生长的最适宜培养基是燕麦片培养基,适宜生长温度范围是20~30℃,最适生长温度为25℃,光照对菌丝生长无显著影响,最适pH值为9~10,最适碳源为α-乳糖,最适氮源为尿素,菌丝在55℃水浴10 min后则不能生长。

  11. Proteomic and Functional Analysis of the Cellulase System Expressed by Postia placenta during Brown Rot of Solid Wood

    Energy Technology Data Exchange (ETDEWEB)

    Ryu, Jae San; Shary, Semarjit; Houtman, Carl J.; Panisko, Ellen A.; Korripally, Premsagar; St John, Franz J.; Crooks, Casey; Siika-aho, Matti; Magnuson, Jon K.; Hammel, Ken

    2011-11-01

    Abstract Brown rot basidiomycetes have an important ecological role in lignocellulose recycling and are notable for their rapid degradation of wood polymers via oxidative and hydrolytic mechanisms. However, most of these fungi apparently lack processive (exo-acting) cellulases, such as cellobiohydrolases, which are generally required for efficient cellulolysis. The recent sequencing of the Postia placenta genome now permits a proteomic approach to this longstanding conundrum. We grew P. placenta on solid aspen wood, extracted proteins from the biodegrading substrate, and analyzed tryptic digests by shotgun liquid chromatography-tandem mass spectrometry. Comparison of the data with the predicted P. placenta proteome revealed the presence of 34 likely glycoside hydrolases, but only four of these-two in glycoside hydrolase family 5, one in family 10, and one in family 12-have sequences that suggested possible activity on cellulose. We expressed these enzymes heterologously and determined that they all exhibited endoglucanase activity on phosphoric acid-swollen cellulose. They also slowly hydrolyzed filter paper, a more crystalline substrate, but the soluble/insoluble reducing sugar ratios they produced classify them as nonprocessive. Computer simulations indicated that these enzymes produced soluble/insoluble ratios on reduced phosphoric acid-swollen cellulose that were higher than expected for random hydrolysis, which suggests that they could possess limited exo activity, but they are at best 10-fold less processive than cellobiohydrolases. It appears likely that P. placenta employs a combination of oxidative mechanisms and endo-acting cellulases to degrade cellulose efficiently in the absence of a significant processive component.

  12. Inhibition Effect Determination of Fungicides on Mycelial Growth of Maize Top Rot Fungus%杀菌剂对玉米顶腐病菌的抑菌效果测定

    Institute of Scientific and Technical Information of China (English)

    王丽娟; 徐秀德; 董怀玉; 姜钰; 胡兰

    2012-01-01

    室内抑菌、毒力测定表明,不同杀菌剂对玉米(Zea mays L.)顶腐病菌(Fusarium subglutinans)菌丝生长的抑制作用不同;玉米顶腐病菌对化学杀菌剂表现敏感,但是敏感程度不同.筛选出10%环唑醇、10%丙环唑、12.5%腈菌唑、50%退菌特等对玉米顶腐病菌抑制效果较好的药剂,可作为防治该病害的首选药剂.%Determination results of indoor bacteriostasis and toxicity showed that the inhibition effects on mycelial growth of maize top rot fungus were different according to fungicides adopted; maize top rot fungus was sensitive to all fungicides but with different levels of sensitiveness accordingly. 10% Cyproconazole, 10% Propiconazole, 12.5% Myclobutanil and 50% Tuzet were selected as better fungicides to maize top rot fungus, and some useful data on chemical control of the fungus were also provided.

  13. Heuristic Value of a “Virtual Fruit” Model of Peach Fruit Quality and Sensitivity to Brown Rot : Impact of a Single Mutation and Design of Ideotypes

    OpenAIRE

    Génard, Michel; Quilot-Turion, Bénédicte; Ould Sidi, Mohamed Mahmoud; Kadrani, Abdeslam; Hilgert, Nadine; Lescourret, Francoise

    2015-01-01

    This work aimed at investigating the heuristic potential of a process-based model of peach fruit expressing seasonal changes in several quality attributes of fruit (e.g., size, percentages of flesh, water, sugar and acid contents) and fruit sensitivity to brown rot (skin density of cracks).[br/] Firstly, we showed that this “Virtual Fruit” could be used to analyze the impact of a single mutation which decreased the fruit’s requirement for carbon on peach fruit behavior. The mutation trigge...

  14. Growth Inhibition of Cocoa Pod Rot Fungus Phytophthora palmivora byPseudomonas fluorescence and Bacillus subtilis bacteria

    OpenAIRE

    Sakti Widyanta Pratama; Sri Sukamto; Lis Nur Asyiah; Yeni Vida Ervina

    2013-01-01

    Black pod disease caused by Phytophthora palmivorafungus is one of the important diseases on cocoa crop. Pod rot is the most important disease because it may cause loss of cocoa pod. Until now, the fungal pathogen of cocoa black pod disease is still a crucial problem and there is no fungicide that is really effective against the disease. One alternative to control the cocoa black pod disease is by using biological agents as biofungicide, including utilizing Pseudomonas fluorescenceand Bacillu...

  15. Development of variable number of tandem repeats typing schemes for Ralstonia solanacearum, the agent of bacterial wilt, banana Moko disease and potato brown rot.

    Science.gov (United States)

    N'guessan, Carine Aya; Brisse, Sylvain; Le Roux-Nio, Anne-Claire; Poussier, Stéphane; Koné, Daouda; Wicker, Emmanuel

    2013-03-01

    Ralstonia solanacearum is an important soil borne bacterial plant pathogen causing bacterial wilt on many important crops. To better monitor epidemics, efficient tools that can identify and discriminate populations are needed. In this study, we assessed variable number of tandem repeats (VNTR) genotyping as a new tool for epidemiological surveillance of R. solanacearum phylotypes, and more specifically for the monitoring of the monomorphic ecotypes "Moko" (banana-pathogenic) and "brown rot" (potato-pathogenic under cool conditions). Screening of six R. solanacearum genome sequences lead to select 36 VNTR loci that were preliminarily amplified on 24 strains. From this step, 26 single-locus primer pairs were multiplexed, and applied to a worldwide collection of 337 strains encompassing the whole phylogenetic diversity, with revelation on a capillary-electrophoresis genotype. Four loci were monomorphic within all phylotypes and were not retained; the other loci were highly polymorphic but displayed a clear phylotype-specificity. Phylotype-specific MLVA schemes were thus defined, based on 13 loci for phylotype I, 12 loci for phylotype II, 11 loci for phylotype III and 6 for phylotype IV. MLVA typing was significantly more discriminative than egl-based sequevar typing, particularly on monomorphic "brown rot" ecotype (phylotype IIB/sequevar 1) and "Moko disease" clade 4 (Phylotype IIB/sequevar 4). Our results raise promising prospects for studies of population genetic structures and epidemiological monitoring. PMID:23376194

  16. Occurrence of Soft Rot on Raspberry (Rubus crataegifolius) Caused by Rhizopus oryzae in Korea

    OpenAIRE

    Jin-Hyeuk Kwon; Dong-Wan Kang; Jae-Uk An; Okhee Choi; Youn-Sig Kwak

    2011-01-01

    Soft rot disease on Raspberry (Rubus crataegifolius Bunge) was observed in sale boxes at Jinju CityWholesale Market of Agricultural Products in June 2010. The infected fruits were rapidly water-soaked,softened, black and eventually rotted. The colonies on the infected fruits were white to light brown, formednumerous sporangiospores. Optimum temperature for the mycelial growth of the causal fungus on PDA was30oC and growth was still apparent at 37oC. Sporangia were globose, white at early and ...

  17. THE IMPACT OF CoFeO 4 NANOPARTICLES ON SOLUBLE PROTEIN CONTENT AT WHITE ROT FUNGUS Phanerochaete chrysosporium

    OpenAIRE

    Lacramioara Oprica; Eugen Ungureanu

    2016-01-01

    Experimental investigation focused on influence of different CoFeO4 nanoparticles concentrations on soluble protein and electrophoretic pattern of Phanerochaete chrysosporium fungus. Number of electrophoretic fraction is higher in older mycelium P. chrysosporium 14-day-old compared to that 7-day-old. Moreover, there is an increase in staining intensity of polypeptides of mycelium 14-day-old fact confirmed also by the higher amount of soluble protein. On the other hand, there are n...

  18. Screening of Antagonistic Bacteria from Phyllosphere towards Tobacco Brown Spot Fungus Alternaria alternata

    Institute of Scientific and Technical Information of China (English)

    ZHANG Chengsheng; KONG Fanyu; LI Duochuan; WANG Jing; WANG Fenglong

    2006-01-01

    The possibility of employing antagonistic bacteria for the control of tobacco brown spot was studied. Approximately 136 strains of bacteria were isolated from phyllospheres of tobacco and 9 of these possessed high levels of antagonistic properties. They significantly reduced brown spot in detached tobacco leaves when artificially inoculated with Alternaria alternata. Culture filtrate of the most effective bacterial isolate which designated as Tpb88 was shown to be very efficient in inhibiting mycelial growth of A alternata in dual cultures. Culture filtrate of Tpb88 inhibited germination and germ tube elongation of A alternata. The results showed that the culture filtrate directly inhibited spore germination of A. alternata, especially during the first hours of the paired cultivation. The rate of antagonistic activity of culture filtrate of Tpb88 depended on its concentration in the mixture. The greatest inhibition of spore germination was ob served at the highest concentration of filtrate (filtrate to fungal spores inocula mixed in proportion 1: 50). These suggest that the hypothetic mechanism of Tpb88 against tobacco brown spot is to produce antagonistic substances.

  19. Treatment of the effluent from a kraft bleach plant with the white-rot fungus Pleurotus ostreatoroseus sing

    Directory of Open Access Journals (Sweden)

    A.Z. Santos

    2002-12-01

    Full Text Available The ligninolytic fungus Pleurotus ostreatoroseus (synonymy of Pleurotus ëous was used to treat the first alkali extraction stage (E1 effluent of a kraft bleach plant. It was pelletized and used for two continuous experiments in a two-liter turbulent-flow bioreactor. In the first experiment, the average removal of color and of total phenols was 18.6 and 11.6%, respectively, after the addition of glucose. During the second experiment, which was developed with the addition of several quantities of glucose, the maximum removal of color, of total phenols and of lignin/chlorolignin was 19.4, 9.4 and 44.5%. For both experiments, the best results were obtained when the effluent was diluted and enriched with glucose. This indicated the need for an extra carbon source for the fungal treatment. Using the mycelial mass in suspension, three experiments were carried out. The best results were obtained with 20% fungus and shaking of the effluent. During the last three days of the experiment the average removal of color, of total phenols and of lignin/chlorolignin was 84.4± 6.1, 82.1± 5.7 and 72.4± 8.9, respectively. The results indicate the potential of Pleurotus ostreatoroseus for use in the treatment of E1 effluent.

  20. ACCELERATED LABORATORY TEST OF THREE AMAZONIAN WOOD SPECIES CALLED TAUARI, EXPOSED TO WHITE- AND BROWN-ROT FUNGI AND COLOR RESPONSE ACCORDING TO CIE L* A* B* SYSTEM

    Directory of Open Access Journals (Sweden)

    Esmeralda Yoshico Arakaki Okino

    2015-01-01

    Full Text Available The purposes of this study were to: evaluate de natural durability of three species of tauari ( Couratari guianensis Aublet , Couratari oblongifolia Ducke & R.Knuth and Couratari stellata A.C.Smith, report the colorimetric parameters according to CIE L*a*b* 1976 system and also show the appearance of control and attacked wood blocks. Two brown-rot [ Gloeophyllum trabeum (Persoon ex Fries Murril. and Lentinus lepideus Fr.] and two white-rot [ Trametes versicolor (Linnaeus ex Fries Pilat and Ganoderma applanatum (Pers. ex Wallr.] fungi were used . Tauari wood was classed as “moderately resistant” to “resistant” when exposed to Gloeophyllum trabeum, Trametes versicolor and Ganoderma applanatum fungi. All extractives’ contents of attacked samples decreased when compared with the control (sound wood, except Couratari stellata exposed to Ganoderma applanatum. Conversely, all ash contents increased when compared with the control, except Couratari stellata exposed to Gloeophyllum trabeum. All attacked wood blocks and wood meal samples were darker, except wood meal from Couratari stellata exposed to Trametes versicolor , and redder than the control. The ∆ E* mean value in attacked wood blocks and wood meal samples attained 29.5 and 14.3, respectively.

  1. Cotton (Gossypium hirsutum L.) boll rotting bacteria vectored by the brown stink bug, Euschistus servus (Say) (Hemiptera: Pentatomidea)

    Science.gov (United States)

    Determine the capacity of the brown stink bug (Euschistus servus) to transmit an infective Pantoea agglomerans into cotton (Gossypium hirsutum, L.) bolls. A laboratory colony of the brown stink bug (BSB) was maintained on fresh green beans. The P. agglomerans mutant strain Sc 1-R that holds rifamp...

  2. Improvement of ethanol production by recombinant expression of pyruvate decarboxylase in the white-rot fungus Phanerochaete sordida YK-624.

    Science.gov (United States)

    Wang, Jianqiao; Hirabayashi, Sho; Mori, Toshio; Kawagishi, Hirokazu; Hirai, Hirofumi

    2016-07-01

    To improve ethanol production by Phanerochaete sordida YK-624, the pyruvate decarboxylase (PDC) gene was cloned from and reintroduced into this hyper lignin-degrading fungus; the gene encodes a key enzyme in alcoholic fermentation. We screened 16 transformant P. sordida YK-624 strains that each expressed a second, recombinant PDC gene (pdc) and then identified the transformant strain (designated GP7) with the highest ethanol production. Direct ethanol production from hardwood was 1.41 higher with GP7 than with wild-type P. sordida YK-624. RT-PCR analysis indicated that the increased PDC activity was caused by elevated recombinant pdc expression. Taken together, these results suggested that ethanol production by P. sordida YK-624 can be improved by the stable expression of an additional, recombinant pdc. PMID:26766784

  3. Identification of volatile markers in potato brown rot and ring rot by combined GC-MS and PTR-MS techniques: study on in vitro and in vivo samples.

    Science.gov (United States)

    Blasioli, Sonia; Biondi, Enrico; Samudrala, Devasena; Spinelli, Francesco; Cellini, Antonio; Bertaccini, Assunta; Cristescu, Simona M; Braschi, Ilaria

    2014-01-15

    Ralstonia solanacearum (Rs) and Clavibacter michiganensis subsp. sepedonicus (Cms) are the bacterial causal agents of potato brown and ring rot, respectively, and are included in the A2 list of quarantine pathogens in Europe. Identification by GC-MS analysis of volatile organic compounds from Rs or Cms cultured on different nutrient media was performed. GC-MS and PTR-MS analysis were carried out also on unwounded potato tubers infected with the same pathogens. Infected tubers were produced by experimental inoculations of the plants. In in vitro experiments, Rs or Cms emitted volatile compounds, part of which were specific disease markers of potato (2-propanol and 3-methylbutanoic acid), mainly originating from bacterial metabolism (i.e., amino acid degradation, carbohydrate and fatty acid oxidation). In potato tubers, pathogen metabolism modified the volatile compound pattern emitted from healthy samples. Both bacteria seem to accelerate metabolic processes ongoing in potatoes and, in the case of Rs, disease markers (1-hepten-3-ol, 3,6-dimethyl-3-octanone, 3-ethyl-3-methylpentane, 1-chloroctane, and benzothiazole) were identified. PMID:24313381

  4. The effect of CaCl2 on growth rate, wood decay and oxalic acid accumulation in Serpula lacrymans and related brown-rot fungi

    DEFF Research Database (Denmark)

    Hastrup, Anne Christine Steenkjær; Jensen, Bo; Clausen, Carol. A.;

    2006-01-01

    for 12 strains of S. lacrymans and compared to five brown-rot fungi. This was done by treating copper citrate (CC)-treated Southern yellow pine (SYP) wood with a CaCl2 solution and estimating the decay rate and amount of soluble oxalic acid in an ASTM soil block test. Decay by S. lacrymans was found...... containing CaCl2. In summary, a marked decrease was observed in the decay capacity of S. lacrymans in pine treated with CC+CaCl2. The amount of soluble oxalic acid was measured in CC-treated blocks and blocks also treated with CaCl2. Of the comparative brown-rot fungi, both Antrodia vaillantii (TFFH 294) and...

  5. Integrated Control Effects for Brown Rot of Volvariella volvacea%草菇褐腐病综合防治效果研究

    Institute of Scientific and Technical Information of China (English)

    林德锋; 袁滨; 柯丽娜; 吴顺章

    2015-01-01

    以疣孢霉 Mycogone perniciosa Magn .引起的草菇褐腐病为试验对象,采用化学和物理相结合方法对该病害进行综合防治措施研究。药剂筛选结果表明:药后5 d和10 d ,50%施保功W P 1500倍对草菇褐腐病的防效分别为90.70%和89.66%,均优于45%噻菌灵W P 1200倍、50%福美双W P 1000倍和50%多菌灵W P 800倍的处理。物理措施结果表明:在培养料堆制前对相应环境进行全面清扫及冲洗,并用50%施保功W P 1500倍进行喷雾消毒,防效最高达87.97%;二次发酵时,利用蒸汽对菇房和培养料进行灭菌,当灭菌时间为24 h、灭菌温度60℃时防效最高,达92.47%;采用物理和化学防治相结合的综合措施结果表明,该方法对草菇褐腐病防效达97.97%,可以有效控制草菇褐腐病。%Brown rot caused by Mycogone perniciosa Magn. is a main disease of straw mushroom. In the present study ,the effect of integrated control technologies including chemical control and physical control on the brown rot of straw mushroom was investigated. The results showed that the control efficacy after application for 5 or 10 days were attributed to 1∶1 500 dilution of 50% sporgon (90.70% ,89.66% ) >1∶1 200 dilution of 45% thiabendazole>1∶ 1 000 dilution of 50% thiram > 1∶ 800 dilution of 50% carbendazim . Cleaning of the environment before composting and spray disinfection with 1∶1 500 dilution of 50% sporgon could significantly decreased the damage of M. perniciosa and the control efficiency was 87.97% ,but the control efficacy reached 92.47% after sterilizing the mushroom house and culture components at 60℃ for 24 h. Our results suggest that the integrated control including chemical control and physical control could control the brown rot on straw mushroom efficiently with 97.97%.

  6. Identification and Characterisation of New Microbial Antagonists for Biocontrol of Monilinia laxa, the Causal Agent of Brown Rot on Stone Fruit

    Directory of Open Access Journals (Sweden)

    Peter Jeffries

    2013-10-01

    Full Text Available Monilinia laxa is the causal agent of brown rot disease on stone fruits, and also causes blossom wilt and twig canker. The common practice used to manage this disease is through fungicide treatments. However the demand to reduce fungicide inputs has been increasing and there is a growing number of reports of M. laxa strains that are resistant to fungicides. There is an urgent need to search for an alternative strategy to control the disease. This study focused on the isolation and characterisation of biological control agents (BCAs using indigenous isolates isolated from cherries and plums collected within the UK. A total of 192 isolates were screened against two strains of M. laxa in a series of in vitro dual culture tests. From this in vitro screen, 12 isolates were selected for a subsequent in vivo screen on detached fruits, which then narrowed these isolates down to two potential BCAs. These two strains were identified as Bacillus amyloliquefaciens/subtilis (isolate B91 and Aureobasidium pullulans (isolate Y126. The capability of these two potential BCAs to grow and survive at a range of temperatures likely to be experienced under field and storage conditions was studied in order to gain knowledge for product formulation and field application. Bacillus sp. B91 was shown to be a mesophilic bacterium that could grow at 10–25 °C but suffered significant mortality at 0 and 5 °C, while A. pullulans Y126 was both mesophilic and psychrotolerant as it grew between 0–25 °C with the optimum at 20 °C. When all nutrients were removed, Y126 was able to survive for several weeks in all test temperatures (0–25 °C but showed significant mortality at 25 °C. The capability of B91 to survive at 20 and 25 °C was higher than at low temperatures (0–15 °C. In addition, the modes of action of the potential BCAs were studied. B91 was shown to produce soluble and volatile organic compounds that inhibited M. laxa, while A. pullulans Y126 did not

  7. Biological characteristics of Monilia fructigena as pathogen of brown rot in sweet cherry%大樱桃褐腐病菌生物学特性研究

    Institute of Scientific and Technical Information of China (English)

    刘志恒; 白海涛; 杨红; 唐爽爽; 魏美娜; 黄欣阳; 李俞涛

    2012-01-01

    Brown rot is occurring seriously in some areas of Liaoning which is one of the main sweet cherry producing areas. The biological characteristics of Moniliafructigena of sweet cherry brown rot was studied in order to provide the basis for further study and prevention of this disease. In this study, mycelia growth, spore production and spore germination were detected in relation to temperature, illumination, pH and nu- tritional conditions. The results showed that the optimum temperature for mycelia growth of pathogen was 25 ℃ ; PSA was the best of the 8 culture media in the experiment; the Optimum pH was 6.0 ; dark condi- tion was suitable for mycelia growth. PDA, xylose, NH4H2PO4, 25 ℃ and pH 6.0 were the best for spore production. The rate of spore germination was highest under this condition which includes the optimum carbon sources, nitrogen source, temperature and pH: amidulin, NH4H2PO4, 25 ℃ and pH 7.0. The mycelium could not survive at 56 ℃ for 10 min.%褐腐病在辽宁大樱桃产区严重发生,对大樱桃褐腐病菌(Monilia fructigena)生物学特性进行了研究。试验从温度、光照、pH以及营养条件几方面对病菌菌丝生长、孢子产生及萌发的环境条件进行测定。结果表明,大樱桃褐腐病菌菌丝在PSA培养基、25℃、pH6.0及黑暗条件下生长最好;产孢最佳条件为PDA、木糖、NH4H2PO4、25℃、pH6.0;分生孢子在可溶性淀粉、NH4H2PO4、25℃、pH7.0的条件下萌发率最高。病菌菌丝致死温度为56℃、10min。

  8. Simultaneous detoxification and decolorization of molasses spent wash by the immobilized white-rot fungus Flavodon flavus isolated from a marine habitat

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.; Mohandass, C.; Kamat, S.; Shailaja, M.S.

    % concentration. (Fig. 3). In another trial, MSW treated for 5 days with the fungus with 50 % of the color removed, was further treated with a new batch of immobilized fungus. This resulted in an additional 30% reduction in color. Therefore, in effect upto 78...-80% of the color could be removed by employing different strategies of using the immobilized fungus. Almost similar percentage of decolorization was achieved within day 3 to 5 by using free or immobilized fungus in several trials (Fig. 4). This was further...

  9. Postharvest application of a novel chitinase cloned from Metschnikowia fructicola and overexpressed in Pichia pastoris to control brown rot of peaches.

    Science.gov (United States)

    Banani, Houda; Spadaro, Davide; Zhang, Dianpeng; Matic, Slavica; Garibaldi, Angelo; Gullino, Maria Lodovica

    2015-04-16

    Metschnikowia fructicola strain AP47 is a yeast antagonist against postharvest pathogens of fruits. The yeast was able to produce chitinase enzymes in the presence of pathogen cell wall. A novel chitinase gene MfChi (GenBank accession number HQ113461) was amplified from the genomic DNA of Metschnikowia fructicola AP47. Sequence analysis showed lack of introns, an open reading frame (ORF) of 1098 bp encoding a 365 amino acid protein with a calculated molecular weight of 40.9 kDa and a predicted pI of 5.27. MfChi was highly induced in Metschnikowia fructicola after interaction with Monilinia fructicola cell wall, suggesting a primary role of MfChi chitinase in the antagonistic activity of the yeast. The MfChi gene overexpressed in the heterologous expression system of Pichia pastoris KM71 and the recombinant chitinase showed high endochitinase activity towards 4-Nitrophenyl β-d-N,N',N″-triacetylchitotriose substrate. The antifungal activity of the recombinant chitinase was investigated against Monilinia fructicola and Monilinia laxa in vitro and on peaches. The chitinase significantly controlled the spore germination and the germ tube length of the tested pathogens in PDB medium and the mycelium diameter in PDA. The enzyme, when applied on peaches cv. Redhaven, successfully reduced brown rot severity. This work shows that the chitinase MfChi could be developed as a postharvest treatment with antimicrobial activity for fruit undergoing a short shelf life, and confirms that P. pastoris KM71 is a suitable microorganism for cost-effective large-scale production of recombinant chitinases. PMID:25632799

  10. 19种杀菌剂对桃褐腐病离体抑菌活性%Control Effect of 19 Fungicides against Peach Brown Rot in vitro

    Institute of Scientific and Technical Information of China (English)

    何献声

    2011-01-01

    [方法]采用含毒介质法明确了19种杀菌剂对桃褐腐病菌丝生长的影响及对桃褐腐病的离体抑菌活性.[结果]质量浓度10 mg/L时,啶菌(噁)唑、腈苯唑、戊唑醇和多菌灵对桃褐腐病菌丝生长抑菌率达100%;1 mg/L时,以上4种药剂对菌丝生长抑菌率达98%以上.[结论]啶菌(噁)唑、腈苯唑、戊唑醇、多菌灵和氟啶胺的离体抑菌活性高于其他药剂,0.1 mg/L质量浓度下,啶菌(噁)唑和腈苯唑的抑菌活性较为突出,明显高于戊唑醇和多菌灵.%[Methods] The effect on mycelial growth and antibacterial activity of 19 fungicides on peach brown rot in vitro were tested by a medium of containing a poison. [Results] The results showed that the inhibitory ratio of mycelial growth of SYP-Z048, fenbuconazole, tebuconazole and carbendazim was 100% at 10 mg/L, and over 98% at 1 mg/L. [Conclusions] The antibacterial activity in vitro of four fungicides were all higher than others, SYP-Z048 and fenbuconazole had more significant activity at the low concentration of 0.1 mg/L, much higher than tebuconazole and carbendazim.

  11. Morphological and molecular identification of bamboo culm brown rot%刚竹秆褐腐病病原形态及分子鉴定

    Institute of Scientific and Technical Information of China (English)

    周春来; 吴小芹; 叶利芹; 叶建仁; 徐旭凌; 曹云

    2011-01-01

    Bamboo culm brown rot occurs generally, especially in Nanjing,and influences the growth of bamboo such as Phyllostachys glauca and Ph. viridis f. houzeauana,especially for the former. There was no any reports about Ph. glauca infected the disease previously. By isolation and culture of diseased tissue、artificial inoculation test, morphological observation of isolated strain and amplification with universal primer ITS1/ITS4, finally molecular identification with fragment amplified of 559 bp by ITS analysis, the pathogen of Ph. glauca and Ph. viridis f. houzeauana was identified as Fusarium equiseti (Corda) Sacc.. The research result could provide the reference basis for the effective monitoring and control of the disease.%刚竹秆褐腐病在南京地区发生较普遍,影响竹林生长.其主要危害刚竹属的淡竹(Phyllostachys glauca)、黄槽刚竹(Ph.viridis f.houzeauana),其中以淡竹受害最为严重.笔者通过对刚竹秆褐腐病病组织分离培养、人工接种试验、分离菌形态学观察及采用通用引物ITS1/ITS4扩增,对扩增出的约559 bp的片段进行ITS序列分子鉴定,最终将在淡竹和黄槽刚竹等上发生的病原鉴定为木贼镰刀菌(Fusarium equiseti(Corda)Sacc.).

  12. Characterization of Basidiomycetes associated with wood rot of citrus in southern Italy.

    Science.gov (United States)

    Roccotelli, Angela; Schena, Leonardo; Sanzani, Simona M; Cacciola, Santa O; Mosca, Saveria; Faedda, Roberto; Ippolito, Antonio; di San Lio, Gaetano Magnano

    2014-08-01

    The characterization of Basidiomycetes associated with wood rots in commercial citrus orchards in southern Italy revealed that both white and brown rot fungi are implicated in this disease. Fomitiporia mediterranea was the most prevalent species causing a white rot, followed by Fomitopsis sp. which, by contrast, was associated with brown rot wood decay. Furthermore, Phellinus spp. and other nonidentified basidiomycetous fungi showing genetic affinity with the genera Phellinus and Coniophora were occasionally isolated. Artificial inoculations on lemon (Citrus limon) branches showed a faster wood colonization by Fomitopsis sp. compared with F. mediterranea, indicating that the former species as a potentially serious pathogen of citrus trees. The analysis of F. mediterranea internal transcribed spacer (ITS) sequences revealed a high level of genetic variability, with 13 genotypes which were both homozygous (6 genotypes) and heterozygous (7 genotypes). The presence of heterozygous genomes based on ITS sequences has never been reported before for F. mediterranea. This, together with the high frequency of basidiomata on infected wood, unambiguously confirms the outcrossing nature of reproduction in F. mediterranea and the primary role of basidiospores in the dissemination of inoculum. Similarly, high genetic variability was observed analyzing Fomitopsis sp. Because basidiomata of this fungus have not been observed on citrus trees, it can be hypothesized that basidiospores are produced on alternative host plants. PMID:24502208

  13. Alternativas de controle pós-colheita da podridão-parda e da podridão-mole em frutos de pessegueiro Alternatives for post-harvest control of brown rot and soft rot in peach fruits

    Directory of Open Access Journals (Sweden)

    Vicente Luiz de Carvalho

    2009-03-01

    of this study was to evaluate the efficiency of alternative products, used during the post-harvest, in order to control the brown rot (Monilinia fructicola and the soft rot (Rhizopus spp. in peaches. The experiment was carried out in the municipality of Nepomuceno-MG in peaches of cultivar Diamond, of 10 years of planting. The experimental design was completely randomized, with 7 treatments and 3 repetitions. For the study, it was selected fruits without injuries and symptoms of the diseases. The fruits were immersed for 30 seconds in a solution containing the following treatments: 1- clove oil 0.01%; 2-Chlorine dioxide 0.1%; 3-Chlorine dioxide 0.05%; 4-Benzalkonium chloride 0.25%; 5-Dichloran 0.12%, 6-Iprodione 0.15% and 7-control (water only. After the treatments, the fruits, in a number of 10, were placed in sterile trays, in three replicates. The experiment was carried out in uncontrolled environmental conditions, the development of the diseases were evaluated 3 and 5 days after the treatments in 2005 and 3, 6 and 9 days after treatment in 2006. The use of Iprodione controlled the incidence and severity of M. fructicola and Rhizopus spp. The Dichloran was the most effective treatment in the control of Rhizopus spp. and intermediate in the control of M. fructicola. The treatments with clove oil and chlorine dioxide, at the highest concentration, reduced the incidence of Rhizopus spp. and to severity they showed intermediate results.

  14. Metabolism of halogenated compounds in the white rot fungus Bjerkandera adusta studied by membrane inlet mass spectrometry and tandem mass spectrometry

    DEFF Research Database (Denmark)

    Beck, Hans Christian; Lauritsen, F.R.; Patrick, J.S.;

    1996-01-01

    Membrane inlet mass spectrometry has been used for the characterization of halogenated organic compounds produced by the fungus Bjerkandera adusta. Using this technique, electron impact-, chemical ionization-, electron capture negative chemical ionization-mass spectra and tandem mass spectra were...

  15. The Effects of Arbuscular Mycorrhizal Fungus (AMF) and Humic Acid on the Growth of Pepper (Capsicum annuum L.) Plant and Root Rot Disease Caused by Phytophthora capsici Leonian

    OpenAIRE

    ASLANPAY, Burcu; Semra DEMİR

    2015-01-01

    In this study, the effects of singular and double combinations of Arbuscular Mycorrhizal Fungi (AMF) and humic acid (HA) were investigated on the growth of pepper (Capsicum annuum L.) and rot root disease caused by Phytophthora capsici Leonian which has been known as an important problem of pepper cultivation and leading yield losses. Under controlled conditions, four F1 pepper cultivars (Ergenekon, Bafra, Sirena and Yıldız) were inoculated with three different AMF strains (Glomus intraradice...

  16. Resistance of particleboard panels made of agricultural residues and bonded with synthetic resins or PVC plastic to wood-rotting fungi

    Directory of Open Access Journals (Sweden)

    Divino Eterno Teixeira

    2009-12-01

    Full Text Available This study aims to evaluate the resistance of three types of particleboard panel to biodeterioration, two of which bonded with synthetic resins and one bonded with PVC plastic. Composite panels were made using sugar cane straw particles as raw material which were bonded together with urea-formaldehyde (UF, tannin-formaldehyde (TANI and PVC plastic (PVC resins. Decay tests were performed following procedures outlined in the ASTM D2017-81/1994 standard, whereby sample specimens were subjected to attack by white rot fungus Trametes versicolor and brown rot fungus Gloeophyllum trabeum using pine (Pinus sp. and embaúba (Cecropia sp. as reference timber. Panels bonded with PVC resin were rated ‘resistant’ to attack by both fungi while those bonded with UF and TANI resins were rated ‘slightly resistant’ to their attack.

  17. Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion

    Energy Technology Data Exchange (ETDEWEB)

    Martinez, Diego; Challacombe, Jean; Morgenstern, Ingo; Hibbett, David; Schmoll, Monika; Kubicek, Christian P.; Ferreira, Patricia; Ruiz-Duenas, Francisco; Martinez, Angel T.; Kersten, Phil; Hammel, Ken; Vanden Wymelenberg, Amber; Gaskell, Jill; Lindquist, Erika; Sabat, Gregorz; Splinter Bondurant, Sandra; Larrondo, Luis F.; Canessa, Paulo; Vicuna, Rafael; Yadev, Jagjit; Doddapaneni, Harshavardhan; Subramanian, Venkataramanan; Pisabarro, Antonio; Lavin, Jose L.; Oguiza, Jose A.; Master, Emma; Henrissat, Bernard; Coutinho, Pedro M.; Harris, Paul; Magnuson, Jon K.; Baker, Scott E.; Bruno, Kenneth S.; Kenealy, William; Hoegger, Patrik; Kues, Ursula; Ramaiya, Preethi; Lucas, Susan; Salamov, Asaf; Shapiro, Harris; Tu, Hank; Chee, Christine L.; Misra, Monica; Xie, Gary; Teter, Sarah; Yaver, Debbie; James, Tim; Mokrejs, Martin; Pospisek, Martin; Grigoriev, Igor V.; Brettin, T.; Rokhsar, Daniel S.; Berka, Randy; Cullen, Dan

    2009-02-10

    Brown-rot fungi such as Postia placenta are common inhabitants of forest ecosystems and are also largely responsible for the destructive decay of wooden structures. Rapid depolymerization of cellulose is a distinguishing feature of brown-rot, but the biochemical mechanisms and underlying genetics are poorly understood. Systematic examination of the P. placenta genome, transcriptome, and secretome revealed unique extracellular enzyme systems, including an unusual repertoire of extracellular glycoside hydrolases. Genes encoding exocellobiohydrolases and cellulose-binding domains, typical of cellulolytic microbes, are absent in this efficient cellulose-degrading fungus. When P. placenta was grown in media containing cellulose as sole carbon source, transcripts corresponding to many hemicellulases and to a single putative β-1-4 endoglucanase were expressed at high levels relative to glucose grown cultures. These transcript profiles were confirmed by direct identification of peptides by liquid chromatography-tandem mass spectrometry (LC-MS/MS). Also upregulated under cellulolytic culture conditions were putative iron reductases, quinone reductase, and structurally divergent oxidases potentially involved in extracellular generation of Fe(II) and H2O2. These observations are consistent with a biodegradative role for Fenton chemistry in which Fe(II) and H2O2 react to form hydroxyl radicals, highly reactive oxidants capable of depolymerizing cellulose. The P. placenta genome resources provide unparalleled opportunities for investigating such unusual mechanisms of cellulose conversion. More broadly, the genome offers insight into the diversification of lignocellulose degrading mechanisms in fungi. In particular, comparisons between P. placenta and the closely related white-rot fungus, Phanerochaete chrysosporium support an evolutionary shift from white-rot to brown-rot during which efficient depolymerization of lignin was lost.

  18. Genome, transcriptome, and secretome analysis of wood decay fungus postia placenta supports unique mechanisms of lignocellulose conversion

    Energy Technology Data Exchange (ETDEWEB)

    Martinez, Diego [Los Alamos National Laboratory; Challacombe, Jean F [Los Alamos National Laboratory; Misra, Monica [Los Alamos National Laboratory; Xie, Gary [Los Alamos National Laboratory; Brettin, Thomas [Los Alamos National Laboratory; Morgenstern, Ingo [CLARK UNIV; Hibbett, David [CLARK UNIV.; Schmoll, Monika [UNIV WIEN; Kubicek, Christian P [UNIV WIEN; Ferreira, Patricia [CIB, CSIC, MADRID; Ruiz - Duenase, Francisco J [CIB, CSIC, MADRID; Martinez, Angel T [CIB, CSIC, MADRID; Kersten, Phil [FOREST PRODUCTS LAB; Hammel, Kenneth E [FOREST PRODUCTS LAB; Vanden Wymelenberg, Amber [U. WISCONSIN; Gaskell, Jill [FOREST PRODUCTS LAB; Lindquist, Erika [DOE JGI; Sabati, Grzegorz [U. WISCONSIN; Bondurant, Sandra S [U. WISCONSIN; Larrondo, Luis F [U. CATHOLICA DE CHILE; Canessa, Paulo [U. CATHOLICA DE CHILE; Vicunna, Rafael [U. CATHOLICA DE CHILE; Yadavk, Jagiit [U. CINCINATTI; Doddapaneni, Harshavardhan [U. CINCINATTI; Subramaniank, Venkataramanan [U. CINCINATTI; Pisabarro, Antonio G [PUBLIC U. NAVARRE; Lavin, Jose L [PUBLIC U. NAVARRE; Oguiza, Jose A [PUBLIC U. NAVARRE; Master, Emma [U. TORONTO; Henrissat, Bernard [CNRS, MARSEILLE; Coutinho, Pedro M [CNRS, MARSEILLE; Harris, Paul [NOVOZYMES, INC.; Magnuson, Jon K [PNNL; Baker, Scott [PNNL; Bruno, Kenneth [PNNL; Kenealy, William [MASCOMA, INC.; Hoegger, Patrik J [GEORG-AUGUST-U.; Kues, Ursula [GEORG-AUGUST-U; Ramaiva, Preethi [NOVOZYMES, INC.; Lucas, Susan [DOE JGI; Salamov, Asaf [DOE JGI; Shapiro, Harris [DOE JGI; Tuh, Hank [DOE JGI; Chee, Christine L [UNM; Teter, Sarah [NOVOZYMES, INC.; Yaver, Debbie [NOVOZYMES, INC.; James, Tim [MCMASTER U.; Mokrejs, Martin [CHARLES U.; Pospisek, Martin [CHARLES U.; Grigoriev, Igor [DOE JGI; Rokhsar, Dan [DOE JGI; Berka, Randy [NOVOZYMES; Cullen, Dan [FOREST PRODUCTS LAB

    2008-01-01

    Brown-rot fungi such as Postia placenta are common inhabitants of forest ecosystems and are also largely responsible for the destructive decay of wooden structures. Rapid depolymerization of cellulose is a distinguishing feature of brown-rot, but the biochemical mechanisms and underlying genetics are poorly understood. Systematic examination of the P. placenta genome, transcriptome and secretome revealed unique extracellular enzyme systems, including an unusual repertoire of extracellular glycoside hydrolases. Genes encoding exocellobiohydrolases and cellulose-binding domains, typical of cellulolytic microbes, are absent in this efficient cellulose-degrading fungus. When P. placenta was grown in medium containing cellulose as sole carbon source, transcripts corresponding to many hemicellulases and to a single putative {beta}-1-4 endoglucanase were expressed at high levels relative to glucose grown cultures. These transcript profiles were confirmed by direct identification of peptides by liquid chromatography-tandem mass spectrometry (LC{center_dot}MSIMS). Also upregulated during growth on cellulose medium were putative iron reductases, quinone reductase, and structurally divergent oxidases potentially involved in extracellular generation of Fe(II) and H202. These observations are consistent with a biodegradative role for Fenton chemistry in which Fe(II) and H202 react to form hydroxyl radicals, highly reactive oxidants capable of depolymerizing cellulose. The P. placenta genome resources provide unparalleled opportunities for investigating such unusual mechanisms of cellulose conversion. More broadly, the genome offers insight into the diversification of lignocellulose degrading mechanisms in fungi. Comparisons to the closely related white-rot fungus Phanerochaete chrysosporium support an evolutionary shift from white-rot to brown-rot during which the capacity for efficient depolymerization of lignin was lost.

  19. Rhizoctonia root rot of lentil

    Science.gov (United States)

    Rhizoctonia root rot is a soilborne disease of lentil caused by the fungal pathogen Rhizoctonia solani, and is favored by cool (11-19 C or 52 - 66 F) and wet soil conditions. The disease starts as reddish or dark brown lesions on lentil plants near the soil line, and develops into sunken lesions an...

  20. Basal Root Rot, a new Disease of Teak (Tectona grandis in Malaysia caused by Phellinus noxius

    Directory of Open Access Journals (Sweden)

    Mohd Farid, A.

    2005-01-01

    Full Text Available Basal root rot of teak was first reported from Sabak Bernam, Selangor making this the first report of the disease on teak in Peninsular Malaysia. The fungus found associated with the disease was Phellinus noxious. The disease aggressively killed its host irrespective of the host health status. Bark depression at the root collar which was visible from a distance was the characteristic symptom and the main indicator in identifying the disease in the plantation since above ground symptoms of the canopy could not be differentiated from crowns of healthy trees. However, although above ground symptoms were not easily discernible, the disease was already advanced and the trees mostly beyond treatment; 3.4 % of the trees in the plantation were affected and the disease occurred both on solitary trees and in patches. Below ground, infected trees had rotted root systems, mainly below and around the collar region with brown discolored wood and irregular golden-brown honeycomb-like pockets of fungal hyphae in the wood. Pathogenicity tests showed that the fungus produced symptoms similar to those observed in the plantation and killed two year-old teak plants. The disease killed all the inoculated hosts within three months, irrespective of wounded or unwounded treatments.

  1. Trichocitrin, a new fusicoccane diterpene from the marine brown alga-endophytic fungus Trichoderma citrinoviride cf-27.

    Science.gov (United States)

    Liang, Xiao-Rui; Miao, Feng-Ping; Song, Yin-Ping; Guo, Zhan-Yong; Ji, Nai-Yun

    2016-07-01

    One new diterpene, trichocitrin (1), and four known secondary metabolites, nafuredin (2), 5-hydroxy-2,3-dimethyl-7-methoxychromone (3), 24-methylenecycloartanol (4) and citrostadienol (5), were isolated from the culture of marine brown alga-endophytic Trichoderma citrinoviride cf-27. Trichocitrin (1) represents the first Trichoderma-derived and furan-bearing fusicoccane diterpene, and its structure and relative configuration were identified by analysis of 1D/2D NMR and mass spectroscopic data. Compounds 1 and 2 exhibited 8.0- and 9.5-mm inhibition zones, respectively, against Escherichia coli at 20 μg/disc and 54.1 and 36.7% growth inhibition, respectively, of Prorocentrum donghaiense at 80 μg/mL. PMID:26728965

  2. Degradation of cellulose and hemicelluloses by the brown rot fungus Piptoporus betulinus –production of extracellular enzymes and characterization of the major cellulases

    Czech Academy of Sciences Publication Activity Database

    Valášková, Vendula; Baldrian, Petr

    2006-01-01

    Roč. 152, - (2006), s. 3613-3622. ISSN 0026-2617 R&D Projects: GA ČR(CZ) GP204/02/P100 Institutional research plan: CEZ:AV0Z50200510 Keywords : degradation * piptoporus betulinus * cellulases Subject RIV: EE - Microbiology, Virology Impact factor: 0.543, year: 2006

  3. Preliminary evidence of the role of hydrogen peroxide in the degradation of benzo[a]pyrene by a non-white rot fungus Fusarium solani

    Energy Technology Data Exchange (ETDEWEB)

    Veignie, Etienne; Rafin, Catherine; Woisel, Patrice; Cazier, Fabrice

    2004-05-01

    In order to study the enzymatic mechanisms involved in the successive steps of BaP degradation by a Deuteromycete fungus Fusarium solani, we developed an indirect approach by using inhibitors of enzymes. We used either specific inhibitors of peroxidases (i.e. salicylhydroxamic acid) and of cytochrome P-450 (i.e. piperonyl butoxyde) or inhibitors of both enzymes (i.e. potassium cyanide). Surprisingly, no expected decrease of BaP degradation was observed with most inhibitors tested. On the contrary, more BaP was degraded. Only butylated hydroxytoluene, which acts as a free radical scavenger, inhibited BaP degradation. The inhibition of these enzymes, which use H{sub 2}O{sub 2} as a cosubstrat, might have resulted in an increase of hydrogen peroxide availability in the fungal cultures. This enhancement could induce formation of reactive oxygen species (ROS) which might be the agents that initiate benzo[a]pyrene oxidation. This study proposed a hypothetic alternative metabolic pathway involved in PAH metabolism by Fusarium solani. - An alternative metabolic pathway was demonstrated.

  4. Preliminary evidence of the role of hydrogen peroxide in the degradation of benzo[a]pyrene by a non-white rot fungus Fusarium solani

    International Nuclear Information System (INIS)

    In order to study the enzymatic mechanisms involved in the successive steps of BaP degradation by a Deuteromycete fungus Fusarium solani, we developed an indirect approach by using inhibitors of enzymes. We used either specific inhibitors of peroxidases (i.e. salicylhydroxamic acid) and of cytochrome P-450 (i.e. piperonyl butoxyde) or inhibitors of both enzymes (i.e. potassium cyanide). Surprisingly, no expected decrease of BaP degradation was observed with most inhibitors tested. On the contrary, more BaP was degraded. Only butylated hydroxytoluene, which acts as a free radical scavenger, inhibited BaP degradation. The inhibition of these enzymes, which use H2O2 as a cosubstrat, might have resulted in an increase of hydrogen peroxide availability in the fungal cultures. This enhancement could induce formation of reactive oxygen species (ROS) which might be the agents that initiate benzo[a]pyrene oxidation. This study proposed a hypothetic alternative metabolic pathway involved in PAH metabolism by Fusarium solani. - An alternative metabolic pathway was demonstrated

  5. 利用葡萄籽油防治桃子采后褐腐病的研究%Application of Grape Seed Oil to Control Brown Rot of Postharvest Peaches

    Institute of Scientific and Technical Information of China (English)

    张殿朋; 韩雪梅; 卢彩鸽; 张晓元; 刘伟成

    2013-01-01

    In this study,the efficacy of grape seed oil (GFO) at different concentrations (0.5%,0.1%,0.05%,0.01%) in controlling brown rot caused by Monilinia fructicola on postharvest peaches was evaluated in artificially-wounded peaches or under storage conditions,and moreover,the effects of GFO on fruit quality parameters including firmness,total soluble solids,ascorbic acid and titratable acidity were investigated.In vitro,when M.fructicola at 5 × 104 cfu/mL was cultured at the presence of GFO at the concentration of ≥0.05 %,the pathogen spore germination was completely inhibited by GFO; In vivo,when M.fructicola at 5 × 104 cfu/mL was inoculated into artificially-wounded peaches followed by inoculating GFO,GFO at the concentration of≥0.05% reduced the brown rot diameter by more than 50%,but no significant difference was observed between 0.1% and 0.5%.However,when the concentration of GFO was 0.01%,the control efficacy in vivo was significantly decreased.Therefore,the optimal concentration of GFO in controlling brown rot on postharvest peaches was defined as 0.1%.When stored at 1 ℃ and 96% RH for 21 days,the disease incidence of 0.1% GFO-treated peaches was 20.0%,the disease incidence of the fungicide (tebuconazole)-treated peaches was 18.7 %,and the disease incidence of the control group was 45.5%,showing that the efficacy of 0.1% GFO in controlling brown rot was 56.0%,which was very similar to that of fungicide(58.9%).Fruit quality parameter assessment indicated that GFO had no significant effects on the peach quality.As far as we know,this is the first report on application of non-harmful grape seed oil to control the brown rot on postharvest peaches as an alternative to fungicide.%为探索桃采后褐腐病的新型非化学农药防治手段,研究了不同用量葡萄籽油处理(体积分数分别为0.5%、0.1%、0.05%、0.01%)对桃采后褐腐病的抑制效果.将褐腐病菌(Monilinia fructicola)(终浓度:5

  6. EXTRACTION AND PURIFICATION OF EXTRACELLULAR LACCASE FROM WILD, MUTANTS AND HYBRID STRAINS OF TWO WHITE-ROT FUNGUS AND ITS APPLICATIONS IN DECOLOURIZATION AND LIGNINOLYSIS

    Directory of Open Access Journals (Sweden)

    Olusola Majolagbe

    2012-12-01

    Full Text Available Extracellular laccases were extracted from a 5-day old submerge cultures of the wild, mutants and hybrid of Lentinus subnudus. Mutants were generated by exposure of the wild strain of L. subnudus to ultraviolet radiation (ג = 280 nm at specific time intervals while the hybrid was produced by cross-breeding L. subnudus with L. edodes. The crude enzyme was fractionated with 80% ammonium sulphate and further purified on DEAE column. The laccase has a molecular weight of about 45 KDa. Purification yield on DEAE column gave the highest purification yield of 23.25% in SWT and least in SHT (5.29%. Its potentials in decolourization of 2, 6-dichlorophenol-indophenol dye at different pH conditions were investigated. Five out of the six fungal strains tested gave significant (P<0.05 percentage decolourization (≥43.94% at pH 8. The fungus was further studied for their ability in degrading wheat and paddy straws. The solid substrate fermentation was inoculated with two pieces (0.6cm diameter mycelial agar blocks of each of the fungal strains, supplemented with 30mg/100g sucrose, 24mg/100g KNO3 and 60mg/100g CaCO3. The periodic reduction in weight of the solid substrate medium and enzymatic activity of laccase for each of the fungal strains was assessed. Therefore, the ability of the wild, mutants and hybrid of L subnudus strains to produce laccase enzyme shows their significant potential in textile industry, especially in decolourization of dye and bioconversion of lignocellulosic wastes.

  7. Controle da podridão parda do pessegueiro com fungicidas e fosfitos avaliados em pré e pós-colheita Control of peach tree brown rot by fungicides and phosphites evaluated during preharvest and postharvest

    Directory of Open Access Journals (Sweden)

    Luciene Martins Moreira

    2009-04-01

    Full Text Available A podridão parda é a doença mais importante para a cultura do pessegueiro, entretanto, no Brasil são escassos os trabalhos realizados a campo visando o seu controle. Objetivou-se, neste trabalho, selecionar fungicidas em laboratório e avaliar a sua eficiência e de fosfitos a campo, para o controle da podridão parda monitorando as fases de desenvolvimento de frutos e pós-colheita, além de avaliar as características qualitativas dos frutos. O experimento de campo foi realizado com seis tratamentos e quatro repetições: três fungicidas pré-selecionados in vitro (iminoctadine tris albesilate, myclobutanil e iprodione, dois fosfitos (CaB e de K e testemunha. Foi avaliada a incidência de infecções latentes de Monilinia fructicola em frutos em desenvolvimento e em frutos maduros após a colheita. Para os frutos em desenvolvimento observou-se maior incidência nas duas últimas coletas. No campo, o iprodione e o iminoctadine mostraram eficiência no controle da doença durante as avaliações. Após três dias no ambiente o iminoctadine foi melhor que os demais tratamentos mantendo a incidência da podridão parda em 1,0% contra 31,4% no tratamento com iprodione e 91,2% na testemunha. O fosfito de CaB não mostrou diferença em relação à testemunha no decorrer das avaliações, mas o fosfito de K, reduziu em 60 e 28% o número de frutos doentes aos três e cinco dias, respectivamente, em relação à testemunha. Quanto aos parâmetros de qualidade, o peso médio dos frutos, o diâmetro e a firmeza da polpa, não mostraram diferenças significativas em relação à testemunha.Brown rot is the most important disease in peach tree cultivation, but field studies with control methods are currently rare in Brazil. One of the objectives of this study was to select fungicides in the laboratory then test them in the field, additionally to phosphites, for the control of the brown rot. The control was performed by observing the fruit development

  8. 双孢蘑菇褐腐病病原菌的分离及分子鉴定%Isolation and Molecular Identification of a Pathogen Causing Brown Rot in Agaricus bisporus

    Institute of Scientific and Technical Information of China (English)

    李河; 周国英; 刘君昂

    2009-01-01

    Strain CSUFT0821, a pathogen causing brown rot of Agaricus bisporus, has been identified by determining the sequence of a ribosomal DNA internal transcribed spacer (ITS) and comparing with corresponding sequences deposited in GenBank. Homology was highest (99%) with an ITS sequence from Mycogone perniciosa (EU380317). A phylogenetic tree constructed on the basis of ITS sequences revealed very close proximity between EU380317 and the ITS sequence from strain CSUFT0821, and confirmed that the latter was M. perniciosa.%对引起双孢蘑菇(Agaricus bisporus)褐腐病的病原菌进行分离和分子鉴定.分离培养褐腐病病原菌,采用CTAB法抽提其基因组总DNA,利用真菌通用引物ITS1和ITS4扩增菌株rDNA ITS区序列,扩增产物纯化后克隆转化至大肠杆菌,挑选克隆成功的菌株进行测序.测序结果在GenBank中进行同源性搜索,并下载部分具有代表性种的ITS序列,利用软件MEGA4 构建分子系统发育树,通过序列分析,鉴定出引起双孢蘑菇褐腐病的病原菌为Mycogone perniciosa.

  9. Expression of Five Endopolygalacturonase Genes and Demonstration that MfPG1 Overexpression Diminishes Virulence in the Brown Rot Pathogen Monilinia fructicola.

    Science.gov (United States)

    Chou, Chien-Ming; Yu, Fang-Yi; Yu, Pei-Ling; Ho, Jia-Fang; Bostock, Richard M; Chung, Kuang-Ren; Huang, Jenn-Wen; Lee, Miin-Huey

    2015-01-01

    Monilinia fructicola is a devastating pathogen on stone fruits, causing blossom blight and fruit rot. Little is known about pathogenic mechanisms in M. fructicola and related Monilinia species. In this study, five endopolygalacturonase (endo-PG) genes were cloned and functionally characterized in M. fructicola. Quantitative reverse-transcriptase PCR (qRT-PCR) revealed that the five MfPG genes are differentially expressed during pathogenesis and in culture under various pH regimes and carbon and nitrogen sources. MfPG1 encodes the major endo-PG and is expressed to significantly higher levels compared to the other four MfPGs in culture and in planta. MfPG1 function during pathogenesis was evaluated by examining the disease phenotypes and gene expression patterns in M. fructicola MfPG1-overexpressing strains and in strains carrying the β-glucuronidase (GUS) reporter gene fused with MfPG1 (MfPG1-GUS). The MFPG1-GUS reporter was expressed in situ in conidia and hyphae following inoculation of flower petals, and qRT-PCR analysis confirmed MfPG1 expression during pathogenesis. MfPG1-overexpressing strains produced smaller lesions and higher levels of reactive oxygen species (ROS) on the petals of peach and rose flowers than the wild-type strain, suggesting that MfPG1 affecting fungal virulence might be in part resulted from the increase of ROS in the Prunus-M. fructicola interactions. PMID:26120831

  10. Expression of Five Endopolygalacturonase Genes and Demonstration that MfPG1 Overexpression Diminishes Virulence in the Brown Rot Pathogen Monilinia fructicola.

    Directory of Open Access Journals (Sweden)

    Chien-Ming Chou

    Full Text Available Monilinia fructicola is a devastating pathogen on stone fruits, causing blossom blight and fruit rot. Little is known about pathogenic mechanisms in M. fructicola and related Monilinia species. In this study, five endopolygalacturonase (endo-PG genes were cloned and functionally characterized in M. fructicola. Quantitative reverse-transcriptase PCR (qRT-PCR revealed that the five MfPG genes are differentially expressed during pathogenesis and in culture under various pH regimes and carbon and nitrogen sources. MfPG1 encodes the major endo-PG and is expressed to significantly higher levels compared to the other four MfPGs in culture and in planta. MfPG1 function during pathogenesis was evaluated by examining the disease phenotypes and gene expression patterns in M. fructicola MfPG1-overexpressing strains and in strains carrying the β-glucuronidase (GUS reporter gene fused with MfPG1 (MfPG1-GUS. The MFPG1-GUS reporter was expressed in situ in conidia and hyphae following inoculation of flower petals, and qRT-PCR analysis confirmed MfPG1 expression during pathogenesis. MfPG1-overexpressing strains produced smaller lesions and higher levels of reactive oxygen species (ROS on the petals of peach and rose flowers than the wild-type strain, suggesting that MfPG1 affecting fungal virulence might be in part resulted from the increase of ROS in the Prunus-M. fructicola interactions.

  11. Soft Rot on Citrus unshiu Caused by Rhizopus oryzae in Korea

    OpenAIRE

    Jin-Hyeuk Kwon; Jinwoo Kim; Jae-Wook Hyun; Yong Hwan Lee; Hong-Sik Shim

    2011-01-01

    Soft rot caused by Rhizopus oryzae occurred on unshiu orange (Citrus unshiu Marc.) sampled from commercial markets in Jinju, Korea, 2010. The first symptom of soft rot on orange is a water-soaked appearance of the affected tissue. The infected parts later disintegrated into a mushy mass of disorganized cells followed by rapid softening of the diseased tissue. The lesion on orange was rapidly softened and rotted, then became brown or dark brown. Optimum temperature for mycelial growth of the c...

  12. Identification of the pathogen causing brown rot of Chinese Dwarf Cherry( Cerasus humilis%欧李褐腐病病原菌鉴定

    Institute of Scientific and Technical Information of China (English)

    徐成楠; 周宗山; 吴玉星; 迟福梅; 张红军

    2011-01-01

    欧李[ Cerasus humilis( Bge.) Sok.]为蔷薇科樱桃属果树,别名钙果,原产中国,分布于我国的黑龙江、辽宁、内蒙古、河北、山东、山西等省区.多生长在向阳山坡或沙丘边缘,资源相当丰富.欧李株高0.3~1.5m,多为0.5~0.7m左右,是目前世界上最矮小的木本果树.果实可鲜食或加工,含糖、蛋白质、维生素C,特别是矿质元素铁和钙的含量很高,每100果肉干分别含有58和360 mg种仁可作药用,中药称之为"郁李仁"可消毒化肿.%One serious disease happened on the fruit of Chinese Dwarf Cherry in Liaoning Province recently. The typical symptom was brown spot formed on the fruit surface. The spot spread quickly through the whole fruits, then the fruits were rotten. There were tomentum round shaped mildew formed on the surface of symptomatic fruits. The pathogen was isolated from infected fruits. After pathogenicity tests in lab and field and re-isolation, the isolate HI was determined to be responsible for the disease. HI colony on PDA was 70 -75 mm in diameter, with concentric rings in grayish or light brown color after 7 days incubation at 221 with illumination of 12 h near-UV/12 h dark. The conidia were one-celled, hyaline, lemon-shaped, (10-27) jun x (7-17) jun on PDA, produced in branched monilioid chains. The rDNA ITS sequence of islolates HI and Gl had 100% similarity with those of Monilinia fructicola in GenBank. The amplification results with three Monilinia specific primer pairs showed that only primer pair ITSlMfcl and ITS4Mfcl could amplify a 356 bp fragment. Based on the morphological characteristics and rDNA molecular analysis, the pathogen was finally identified as M. Fructicola.

  13. Queima das flores e podridão parda em pessegueiro sob sistema de cultivo orgânico Blossom blight and brown rot on organic peach production system

    Directory of Open Access Journals (Sweden)

    Cláudio Keske

    2010-08-01

    Full Text Available A queima das flores e a podridão parda, causadas por Monilinia fructicola, são as doenças mais importantes na cultura do pessegueiro. Este estudo teve como objetivo verificar a incidência de queima das flores e podridão parda latente em frutos verdes e na colheita sob condições naturais de infecção, em relação à posição dos ramos em pomar com cultivares de pessegueiro sob sistema de cultivo orgânico. As avaliações foram realizadas com as cultivares 'Aurora', 'Flordaking', 'Marli' e 'Della Nona' em 2006, e 'Aurora' e 'Marli' em 2007 e 2008 e conduzidas em sistema orgânico em Rio do Sul, Santa Catarina (SC. Foram monitorados semanalmente os conídios do patógeno em armadilhas tipo "cata-vento". A incidência média da doença na floração foi de 0,8 ('Della Nona' a 19,1% ('Marli'. A incidência na colheita foi de 15,4('Della Nona' a 65,7% ('Flordaking'. Correlações positivas e significativas foram verificadas entre número de conídios e fases fenológicas variando de 0,67 ('Flordaking a 0,99 ('Aurora'. A posição do ramo no pomar, na linha ou na entrelinha não influenciou a incidência da doença nas flores e nos frutos. A maior concentração de conídios foi observada na fase de maturação dos frutos.The blossom blight and brown rot caused by Monilinia fructicola are the most important diseases of peach tree. This study aimed to verify the incidence of the blossom blight on flowers and latent brown rot in green fruits, and at harvest under natural infection, in relation to the position of branches in the orchard with peach cultivars under organic system. The evaluations were carried out with the cultivars 'Aurora', 'Flordaking', 'Marli' and 'Della Nona' in 2006, 'Aurora' and 'Marli' in 2007 and 2008 and conducted in an organic syste m in Rio do Sul, SC. Conidia were monitored weekly by "winddriven" traps. At flowering the average incidence was 0.8 ('Della Nona' to 19.1% ('Marli'. The incidence at harvest was 15

  14. 一种玉米新型细菌性褐腐病的病原鉴定%Identification of the bacteria causing a new brown stalk rot on maize

    Institute of Scientific and Technical Information of China (English)

    顾沁; 张昊; 黄海; 丁正; 伍辉军; 高学文

    2016-01-01

    本研究从河北省武邑、献县、阜城和永年采集感病玉米植株。病株症状为叶梢枯死卷曲,叶脉产生黄色病斑,茎秆处黄褐色干腐。从发病植株中分离得到了10株疑似病原细菌菌株,经过回接验证和16S rDNA 和 gyrB 基因的序列分析,结果表明,引起该病害的病原物为菠萝泛菌(Pantoea ananatis )和分散泛菌(Pantoea dispersa )。这是国内首次报道菠萝泛菌和分散泛菌引起玉米细菌性病害。%To identify the pathogens of newly occurred maize disease,we collected the samples of maize disease from four areas (Wuyi,Xianxian,Fucheng and Yongnian)in Hebei Province.The symptoms of the disease showed yellowish-brown dry rot in corn stalk,curl and blight symptoms on leaf tips and yellow spots on leaf veins. Pathogenic tests were assayed by inoculating the bacteria isolated from the diseased corn plants.The pathogens were identified as Pantoea ananatis and P .dispersa according to the sequence analysis of 16S rDNA and gyrB gene .To our knowledge,it is the first report of P .ananatis and P .dispersa causing maize disease in China.

  15. Prospects for Inhibition of lignin degrading enzymes to control ganoderma white rot of oil palm

    OpenAIRE

    Paterson, R. R. M.; Meon, Sariah; Abidin, M. A. Zainal; Lima, Nelson

    2008-01-01

    Oil palm (OP) is prone to a rot by the fungus Ganoderma which may be capable of being controlled by enzyme inhibitors. Palm oil is used in the production of vegetable oil for foods, cosmetics, pharmaceuticals and, most recently, biodiesel. However, the fundamental process of the disease as “white rot” has been ignored by researchers. White rot fungi are capable of degrading lignin ultimately to carbon dioxide and water: Celluloses become available as nutrients for the fungus. One potential co...

  16. Control of speck rot in apple fruit caused by Phacidiopycnis washingtonensis with pre- and postharvest fungicides

    Science.gov (United States)

    Speck rot caused by Phacidiopycnis washingtonensis is a recently reported postharvest fruit rot disease of apple. Infection of apple fruit by the fungus occurs in the orchard, but symptoms develop during storage. In this study, selected pre- and postharvest fungicides were evaluated for control of s...

  17. Preharvest applications of fungicides for control of Sphaeropsis rot in stored apples

    Science.gov (United States)

    Sphaeropsis rot caused by Sphaeropsis pyriputrescens is a recently reported postharvest fruit rot disease of apple in Washington State and causes significant economic losses. Infection of apple fruit by the fungus occurs in the orchard, but decay symptoms develop during storage or in the market. The...

  18. Monitoring cotton root rot progression within a growing season using airborne multispectral imagery

    Science.gov (United States)

    Cotton root rot, caused by the fungus Phymatotrichopsis omnivora, is a serious and destructive disease affecting cotton production in the southwestern United States. Accurate delineation of cotton root rot infections is important for cost-effective management of the disease. The objective of this st...

  19. Comparison of airborne multispectral and hyperspectral imagery for mapping cotton root rot

    Science.gov (United States)

    Cotton root rot, caused by the soilborne fungus, Phymatotrichum omnivorum, is a major cotton disease affecting cotton production in the southwestern and south central U.S. Accurate delineation of root rot infestations is necessary for cost-effective management of the disease. The objective of this s...

  20. Efeito da irradiação UV-C no controle da podridão parda (Monilinia fructicola e da podridão mole (Rhizopus stolonifer em pós-colheita de pêssegos Effect of UV-C irradiation on postharvest control of brown rot (Monilinia fructicola and soft rot (Rhizopus stolonifer of peaches

    Directory of Open Access Journals (Sweden)

    Eliane Bassetto

    2007-10-01

    W.cm-2. Peach fruits were treated with UV-C irradiation in a protective and curative way. In the protector treatment, fruits were exposed to 1.04 kJ.m-2 for 1 min. and were inoculated immediately and after 16, 24 and 40 hours. In the curative treatment, peach fruits were inoculated, incubated and irradiated with 0, 1.04, 5.22, 10.44, 15.66 and 31.32 kJ.m-2 UV-C concentrations. Disease incidence and severity of brown rot were evaluated. In vitro, only the concentrations applied during 1 and 10 min. of exposure reduced the mycelial growth of M. fructicola, while the application of UV-C for 10-15 minutes reduced the mycelial growth of R. stolonifer and the concentration applied for 30 minutes completely inhibited the mycelial growth of this pathogen. There was no effect caused by UV-C light in the protective control, or by UV-C light in the curative control of brown rot. The irradiation of fruits with UV-C was effective in the curative control of soft rot, and the best results were observed with an exposure time of 10 minutes.

  1. 甘肃省马铃薯束梗褐腐病病原鉴定及其生物学特性研究%Identification and biological characteristics of Solanum tuberosum brown rot caused by Doratomyces stemonitis

    Institute of Scientific and Technical Information of China (English)

    陈泰祥; 陈秀蓉; 杨成德; 朱海波; 王涵琦; 卞静

    2014-01-01

    The identification and biological characteristics of the pathogen isolated from brown rot of Solanum tu-berosum were studied.The pathogen was identified as Doratomyces stemonitis (Pers.ex Fr.)F.J.Morton &G. Smith based on morphological characteristics as well as rDNA-ITS sequences.The optimum temperature for myce-lial growth was 25-30 ℃ at pH 6.The pathogen could use monosaccharide,disaccharide and polysaccharide;the best carbon source was sucrose,and the best nitrogen source was glycine.Illumination had no obvious promotion effect on mycelial growth.The optimum temperature for sporangium sprout was 25 ℃ at pH 7.Spores could ger-minate only in water drop.The filtrate of potato and glucose solution had obvious promotion effect on spore ger-mination.Soil solution had no effects on spore germination.%对甘肃省马铃薯(Solanum tuberosum L.)束梗褐腐病病原进行了分离鉴定和生物学特性研究。经形态特征观察与 rDNA-ITS 序列分析,将病原菌鉴定为细基束梗霉[Doratomyces stemonitis (Pers.ex Fr.)F.J.Morton &G.Smith]。生物学特性研究结果表明,病菌菌丝生长最适温度为25~30℃,最适 pH 为6,病菌能利用多种碳源,但以蔗糖最好,氮源以甘氨酸最适,光照对菌丝生长没有影响。分生孢子在5~40℃范围内均能萌发,最适25℃,最适 pH 为7,分生孢子萌发需液态水,湿度低于99%几乎不萌发,马铃薯汁液和葡萄糖液对孢子萌发有较好的促进作用。本研究为马铃薯束梗褐腐病的防治提供了理论依据。

  2. Occurrence of Sclerotium Rot of Cucumber Caused by Sclerotium rolfsii

    OpenAIRE

    Jin-Hyeuk Kwon; Sang-Dae Lee; Okryun Choi; Shun-Shan Shen; Hong-Sik Shim

    2015-01-01

    Sclerotium rot of cucumber (Cucumis sativus L.) occurred at the experimental field of Gyeongsangnam-do Agricultural Research and Extension Services in July 2012. The typical symptoms included wilt, rot, and water-soaking on stems and fruits and severely infected plants eventually died. White mycelial mats spread over lesions, and then sclerotia were formed on fruit and near soil line. The sclerotia were globoid in shape, white to brown in color and 1−3 mm in size and the hyphal wi...

  3. Fungos antagonistas e efeito de produtos químicos no controle da podridão parda em pomar de pessegueiro Antagonistic fungi and effect of chemical products in the control of brown rot in peach orchards

    Directory of Open Access Journals (Sweden)

    Luciene Martins Moreira

    2008-09-01

    Full Text Available Para verificar a eficiência de controladores biológicos e produtos químicos para controle da podridão parda, foi conduzido um experimento a campo na safra de 2002 no município da Lapa-PR, com a cultivar BR-1. O objetivo do experimento foi fazer seleção de tratamentos com controle biológico comparando-os com químicos em sistemas de manejo utilizados na região. Como tratamentos foram utilizados quatro antagonistas previamente selecionados em trabalho de pós-colheita, isolados F1, F2, F4 (Trichothecium roseum, isolado F9 (Penicillium sp (em 16 aplicações, sistema de Produção Integrada de Pêssegos (PIP (nove aplicações, fosfitos de Ca e de K + captan (11 aplicações, alternância de fungicidas (oito aplicações, tratamento convencional da propriedade (PC (nove aplicações, pulverizados desde a floração até a colheita, sendo a testemunha sem pulverização. Para avaliação, foi contado o número de frutos por ramo marcado após o raleio e no início da colheita. Para os frutos colhidos nos ramos foi determinada a incidência da doença na colheita e aos 3 e 5 dias em pós-colheita. O PIP, fosfito+captan, e isolado F4, não diferirem estatisticamente do padrão PC, e reduziram 95,5; 63,6 e 68,2%, respectivamente a doença em relação à testemunha que apresentou 44% dos frutos com podridão parda aos cinco dias. O tratamento com a alternância de fungicidas foi o melhor, e não foram observados frutos com a doença, entretanto apresentou uma redução do número de frutos entre o raleio e a colheita de 76,5% contra 50% em média dos demais tratamentos indicando um provável efeito fitotóxico.The efficiency of biological controllers and chemical products in the control of brown rot was investigated in a field experiment during the 2002 growing season in the municipality of Lapa-PR. The cultivar BR1 was used in the experiment. The objective of the experiment was to select treatments with biological control by comparing them

  4. Molecular systematics of the cotton root rot pathogen, Phymatotrichopsis omnivora

    OpenAIRE

    Marek, S.M.; Hansen, K; Romanish, M.; Thorn, R. G.

    2009-01-01

    Cotton root rot is an important soilborne disease of cotton and numerous dicot plants in the south-western United States and Mexico. The causal organism, Phymatotrichopsis omnivora (= Phymatotrichum omnivorum), is known only as an asexual, holoanamorphic (mitosporic) fungus, and produces conidia resembling those of Botrytis. Although the corticoid basidiomycetes Phanerochaete omnivora (Polyporales) and Sistotrema brinkmannii (Cantharellales; both Agaricomycetes) have been suggested as teleomo...

  5. Molecular systematics of the cotton root rot pathogen, Phymatotrichopsis omnivora

    NARCIS (Netherlands)

    Marek, S.M.; Hansen, K.; Romanish, M.; Thorn, R.G.

    2009-01-01

    Cotton root rot is an important soilborne disease of cotton and numerous dicot plants in the south-western United States and Mexico. The causal organism, Phymatotrichopsis omnivora (= Phymatotrichum omnivorum), is known only as an asexual, holoanamorphic (mitosporic) fungus, and produces conidia res

  6. Effect of phosphate and the arbuscular mycorrhizal fungus Glomus intraradices on disease severity of root rot of peas ( Pisum sativum ) caused by Aphanomyces euteiches

    DEFF Research Database (Denmark)

    Bødker, Lars; Kjøller, Rasmus; Rosendahl, Søren

    1998-01-01

    in the growth medium. The arbuscular mycorrhizal fungus Glomus intraradices increased P uptake and the P concentration in the plant but reduced disease development in peas. Polyacrylamide gel electrophoresis followed by densitometry of glucose-6-phosphate dehydrogenase specific to A.euteiches was....... The epicotyl of mycorrhizal plants showed a reduction in disease severity although this part of the plants was not mycorrhizal. Thus, an induced systemic factor may be responsible for increased resistance in mycorrhizal plants....

  7. Etiology of phomopsis root rot in soybean

    Directory of Open Access Journals (Sweden)

    Valéria Cecília Ghissi

    2014-09-01

    Full Text Available In a survey of damages caused by soybean root rot to crops in the south of Brazil for several years, a root rot caused by Phomopsis sp has been found with increasing frequency. The primary symptoms are seen when the main root is cut longitudinally, including the death of the wood which shows white coloration and well-defined black lines that do not have a defined format. Thus, based on similarity, it has been called geographic root rot due to its aspect resembling irregular lines that separate regions on a map. In isolations, colonies and alpha spores of Phomopsis have prevailed. Pathogenicity test was done by means of inoculation in the crown of plants cultivated in a growth chamber. The geographic symptoms were reproduced in plants and the fungus Phomopsis sp. was reisolated. In soybean stems naturally infected with pod and stem blight, geographic symptoms caused by Phomopsis phaseoli are found. To the known symptoms on stems, pods and grains, that of root rot caused by P. phaseoli is now added.

  8. Identification of the pathogenic fungus causing brown spot on tangerine( Citrus reticulata CV.Hongjv%红橘褐斑病病原鉴定

    Institute of Scientific and Technical Information of China (English)

    陈昌胜; 黄峰; 程兰; 冯春刚; 黄涛江; 李红叶

    2011-01-01

    自2007年起重庆万州的红橘(Citrus reticulata Blanco,CV.Hongjv)上爆发一种未曾见过的病害,损失严重,因病斑褐色,故被称之为褐斑病.褐斑病贯穿柑橘整个生长季节,主要为害叶片和果实,严重时也为害新梢,引起大量落叶和落果,甚至枝梢枯死.为明确其病原,本研究从病区多个果园采集发病的叶片、果实和枝梢,检查和分离培养发现病组织中广泛存在链格孢菌(Alternaria)和炭疽菌(Colletotrichum).致病性试验证明只有链格孢菌才能引起类似褐斑症状,而炭疽菌和空白对照都不产生任何症状.通过比较研究这些链格孢菌菌株的形态学,培养性状和多聚半乳糖醛酸酶(endoPG)基因的部分序列,可以断定红橘褐斑病的病原为交链格孢菌[A.alternate(Fr.)Keissler].病原性质的确定将为红橘褐斑病发生规律的研究和控制奠定基础.%An unknown disease has been breaking out and causing a great loss on Hongjv (Citrus reticulata Blanco, CV. Hongjv) since 2007 in Wanzhou, Zhongqing, China. The disease was characterized as the brown spot on affected tissues and named "brown spot disease" temporarily. The disease occurs around a growing season and the severe affected leaves and fruits drop quickly. To determine the causing agent, the infected leaves, fruits and shoots were collected from different orchards. Typical conidiospores and cultures of Alternaria and Colletotrichum were always observed and isolated from infected tissues. However, pathogenici-ty test showed that only the isolates of Alternaria were pathogenic to the leaves and fruits of tangerine (Ci. Reticulata CV. Ponkan). Based on the study of morphology, cultural feature and partial sequence of an endopo-lygalacturonase gene (endoPG), the pathogenic Alternaria was identified as A. Alternate (Fr. ) Keissler. The clarification of pathogen would benefit to the study on epidemiology and control of this disease.

  9. Trichoderma rot on ‘Fallglo’ Tangerine Fruit

    Science.gov (United States)

    In September 2009, brown rot symptoms were observed on ‘Fallglo’ fruit after 7 weeks of storage. Fourteen days prior to harvest, fruit were treated by dipping into one of four different fungicide solutions. Control fruit were dipped in tap water. After harvest, the fruit were degreened with 5 ppm et...

  10. 78 FR 6227 - Importation of Fresh Apricots From Continental Spain

    Science.gov (United States)

    2013-01-30

    ... scorch, Apiognomonia erythrostoma (Pers.), a fungus, and Brown rot, Monilinia fructigena Honey, a fungus.... The PRA determined that three of these four quarantine pests--brown rot, Medfly, and plum fruit moth...: Apiognomonia erythrostoma (Pers.), a brown rot fungus; Ceratitis capitata Wiedemann, the Mediterranean...

  11. Rhizopus Soft Rot on Lily Caused by Rhizopus oryzae in Korea

    OpenAIRE

    Soo-Sang Hahm; Gye-Wan Hong; Byung-Ryun Kim; Kwangseop Han; Takyong Choi; Yungyu Nam; Seunghun Yu

    2014-01-01

    Rhizopus soft rot of lily (Lilium longiflorum) caused by Rhizopus oryzae was observed in the experimental field in Taean Lily Experiment Station in Korea, 2012. The typical symptoms were water-soaked lesions on bottom stem and leaf rot. The lesion rapidly expanded and the plant was softened totally. The fungus grew vigorously at an optimum temperature (25oC) and brownish colony and black sporangia were formed on potato dextrose agar medium. Sporangiophores formed on end of sporang...

  12. Optimization of Laccase Production using White Rot Fungi and Agriculture Wastes in Solid State Fermentation

    OpenAIRE

    Hendro Risdianto; Elis Sofianti; Sri Harjati Suhardi; Tjandra Setiadi

    2012-01-01

    Laccase has been produced in a solid state fermentation (SSF) using white rot fungi and various lignocellulosic based substrates. White rot fungi used were Marasmius sp, Trametes hirsuta, Trametes versicolor and Phanerochaete crysosporium. The solid substrates employed in this research were collected from agriculture waste which were empty fruit bunches (EFB), rice straw, corn cob, and rice husk. The objective of this research was to determine the most promising fungus, the best solid substra...

  13. Chaetochromones A and B, two new polyketides from the fungus Chaetomium indicum (CBS.860.68).

    Science.gov (United States)

    Lu, Keyang; Zhang, Yisheng; Li, Li; Wang, Xuewei; Ding, Gang

    2013-01-01

    Chaetochromones A (1) and B (2), two novel polyketides, were isolated from the crude extract of fungus Chaetomium indicum (CBS.860.68) together with three known analogues PI-3(3), PI-4 (4) and SB236050 (5). The structures of these compounds were determined by HRESI-MS and NMR experiments. Chaetochromones A (1) and B (2) are a member of the polyketides family, which might originate from a similar biogenetic pathway as the known compounds PI-3 (3), PI-4 (4) and SB236050 (5). The biological activities of these secondary metabolites were evaluated against eight plant pathogens, including Alternaria alternata, Ilyonectria radicicola, Trichoderma viride pers, Aspergillus niger, Fusarium verticillioide, Irpex lacteus (Fr.), Poria placenta (Fr.) Cooke and Coriolus versicolor (L.) Quél. Compound 1 displayed moderate inhibitory rate (>60%) against the brown rot fungus Poria placenta (Fr.) Cooke, which causes significant wood decay. In addition, the cytotoxic activities against three cancer cell lines A549, MDA-MB-231, PANC-1 were also tested, without any inhibitory activities being detected. PMID:24013408

  14. Sheath rot of rice in Iran.

    Science.gov (United States)

    Naeimi, S; Okhovvat, S M; Hedjaroude, G A; Khosravi, V

    2003-01-01

    Sheath rot of rice occurs in most rice-growing regions of the world. It usually causes yield losses from 20 to 85%. Sheath rot was reported from Iran in 1993. Year after year, the number of diseased plants increased in the Northern Iran. In summer of 2001, these symptoms were observed in most fields: lesions occur on the upper leaf sheaths, especially the flag leaf sheath. As the disease progresses, lesions enlarge and coalesce and may cover most of the leaf sheath. Panicle may fail to completely or at all. Brown or partially brown not filled or partially filled grain is also associated with infection of the panicle. A whitish powdery growth may be found inside affected sheaths. Infected plants were collected and trasferred to laboratory. Small pieces of diseased tissues were washed under tap water for one hour. Then tissues were placed on WA and incubated at 25 degrees C. These isolates were purified and identified as: Sarocladium oryzae, Fusarium udum, F. semitectum, F. avenaceum, F. flocciferum, F. graminearum, Bipolaris oryzae, Alternaria padwickii, Rhizoctonia solani, Paecilomyces sp., Nigrospora sp. and Trichoderma sp. This is the first report of F. udum in Iran. Also this is the first report that rice is the host for F. semitectum, F. avenaceum and F. flocciferum in Iran. Pathogenicity tests were conducted in glass house. Following species were found to be associated with sheath rot of rice: S. oryzae, F. graminearum, F. udum, F. avenaceum, B. oryzae, A. padwickii. This is the first report in the world that F. udum and A. padwickii are the causal agents of the sheath rot on rice plants. PMID:15151303

  15. Kraft pulping and ECF bleaching of Eucalyptus globulus pretreated by the white-rot fungus Ceriporiopsis subvermispora - doi: 10.4025/actascitechnol.v34i3.12410

    Directory of Open Access Journals (Sweden)

    Claudio Salazar

    2012-05-01

    Full Text Available Eucalyptus globulus wood chips were decayed by the lignin-degrading fungus Ceriporiopsis subvermispora as a pretreatment step before kraft pulping. Weight and component losses of wood after the biotreatment were the following: weight (5%, glucans (1.5%, xylans (4.3%, lignin (5.7% and extractives (57.5%. The residual amount of lignin (expressed by the kappa number in pulps from biotreated wood chips was lower than that of pulps from the undecayed control. Depending on the delignification degree, kraft biopulps presented similar or up to 4% increase in pulp yield and 20% less hexenuronic acids (HexA than control pulps. The extended delignification with O2 decreases approximately 50% of the kappa number of the pulps and increases brightness, but had no effect in HexA reduction. The bleaching steps with chlorine dioxide (D0ED1 sequence decreased the kappa number up to 97%, increased pulp brightness up to 84% ISO and decreased HexA amount up to 91%. The use of C. subvermispora in biopulping of E. globulus generated important benefits during the production of kraft pulps that are reflected in a high pulp yield, low residual lignin content, low HexA amount, high brightness and viscosity of the biopulps as compared with pulps produced from untreated wood chips.

  16. Feed intake, digestibility, nitrogen utilization, ruminal condition and blood metabolites in wethers fed ground bamboo pellets cultured with white-rot fungus (Ceriporiopsis subvermispora) and mixed with soybean curd residue and soy sauce cake.

    Science.gov (United States)

    Oguri, Michimasa; Okano, Kanji; Ieki, Hajime; Kitagawa, Masayuki; Tadokoro, Osamu; Sano, Yoshinori; Oishi, Kazato; Hirooka, Hiroyuki; Kumagai, Hajime

    2013-09-01

    Three types of bamboo pellets as a ruminant feed: P1 (ground bamboo (GB) cultured with the fungus Ceriporiopsis subvermispora (CGB) : soybean curd residue (T) : soy sauce cake (S) in a 5:4:1 ratio on a dry matter (DM) basis); P2 (GB : T : S = 5:4:1 on a DM basis); and P3 (CGB : T : S = 5.5:0.8:3.7 on a DM basis) were prepared. Four wethers were assigned in a 4 × 4 Latin square design experiment to evaluate the applicability of the bamboo pellets. The experimental treatments were C (control): fed alfalfa hay cubes (AC) only, and T1, T2 and T3: fed P1, P2, and P3 with AC by 1:1 on a DM basis, respectively. The digestibility of the DM, organic matter and acid detergent fiber of P1 were significantly higher than those of P2 and P3 (P bamboo pellets cultured with C. subvermispora and mainly mixed with soybean curd residue improved nutritional quality of ground bamboo because of its high digestibility and TDN content. PMID:23607929

  17. Podridão de frutos de melancia causada por Sclerotium rolfsii no estado de Alagoas Watermelon fruit rot caused by Sclerotium rolfsii in the State of Alagoas

    Directory of Open Access Journals (Sweden)

    FÁTIMA M. QUEIROZ

    2002-09-01

    Full Text Available A new fruit rot disease caused by Sclerotium rolfsii on watermelon (Citrullus lanatus was observed in the State of Alagoas. The pathogenicity of the fungus was confirmed by artificial inoculations.This is the first report of S. rolfsii causing fruit rot in watermelon in Northeast of Brazil.

  18. Podridão de frutos de melancia causada por Sclerotium rolfsii no estado de Alagoas Watermelon fruit rot caused by Sclerotium rolfsii in the State of Alagoas

    OpenAIRE

    Fátima M. Queiroz; MUNIZ M. F. S.; MARIA MENEZES; PERICLES G. BARROS

    2002-01-01

    A new fruit rot disease caused by Sclerotium rolfsii on watermelon (Citrullus lanatus) was observed in the State of Alagoas. The pathogenicity of the fungus was confirmed by artificial inoculations.This is the first report of S. rolfsii causing fruit rot in watermelon in Northeast of Brazil.

  19. Fungus Amongus

    Science.gov (United States)

    Wakeley, Deidra

    2005-01-01

    This role-playing simulation is designed to help teach middle level students about the typical lifecycle of a fungus. In this interactive simulation, students assume the roles of fungi, spores, living and dead organisms, bacteria, and rain. As they move around a playing field collecting food and water chips, they discover how the organisms…

  20. 复合白腐真菌茵剂修复原油污染土壤%Restoration of Oil Polluted Soil using Combined Fungus of White-rot Fungi and Microbial Inoculum

    Institute of Scientific and Technical Information of China (English)

    付辉; 孟瑶; 梁红; 董义兴; 程方志; 郝伟; 朱逸格; 高大文

    2012-01-01

    The oil polluted soil in Daqing was simulated under different soil moisture content and inoculation amount, and the effects of complex microbial inoculum ( the most famous northeastern white-rot fungi with high enzyme production : Polyporellus picipes + Pleurotus ostreatus + Pseudotrametes gibbosa) on oil degradation rates and the changes of soil FH values were analyzed. The re- suits showed that the higher the inoculum concentration of complex microbial inoculum, the bigger the effects on oil degradation rates. The effects on oil degradation are remarkable in the first 40 days, especially in the first 20 days. A certain amount of soil moisture is maintained, which is helpful for complex microbial inoculum to work on oil degradation. On the 20th day, the degradation rate reaches 33.43% after adding distilled water regularly, and the oil residue quantity decreases by 16. 571 g/kg, which is 8. 762g/kg more than the oil without adding distilled water in the same period.%模拟大庆原油污染土壤,研究不同接种量和土壤湿度条件下,复合菌剂(采用产酶量高的东北土著白腐真菌:青顶拟多孔菌Polyporelluspicipes’糙皮侧耳菌Pleurotusostreatus’偏肿拟栓菌Pseudotrametesgibbosa)对原油的降解效果及土壤的pH变化规律。结果表明,复合菌剂的接种量越高,对石油的降解率也越高。复合菌剂在投加前40dx,t-石油的降解效果明显,尤其前20d降解效果极其显著。保持一定的土壤湿度,有利于复合菌剂对石油的降解.在第20d,在定期添加蒸馏水的条件下降解率达到33.43%,原油的残余量减少了16.571g/kg,比同期不添加蒸馏水的多去除8.762g/kg。

  1. Sclerotium Rot of Sponge Gourd Caused by Sclerotium rolfsii

    OpenAIRE

    Yong Hwan Lee; Jinwoo Kim; Jin-Hyeuk Kwon; Hong-Sik Shim

    2012-01-01

    Sclerotium rot of sponge gourd occurred at the experimental field of Gyeongsangnam-do AgriculturalResearch and Extension Services in August 2010. The infected fruits showed water-soaked and rot symptoms.White mycelial mats spread over lesions, and then sclerotia were formed on fruit and near soil line. Thesclerotia were globoid in shape, 1−3 mm in size and white to brown in color. The optimum temperature formycelial growth and sclerotia formation on PDA was 30oC and the hyphal width was 4−8 μ...

  2. 高温热处理杉木间伐材的抗褐腐性能%Decay resistance of middle cutting wood of Cunninghamia lancelolate with heat treatment against the brown-rot fungus Poria placenta

    Institute of Scientific and Technical Information of China (English)

    邓邵平; 江茂生

    2008-01-01

    以褐腐菌棉腐卧孔菌为试菌,对分别用热油和热空气为介质,经不同温度、不同时间热处理后的杉木间伐材试样的耐腐性进行了试验,并与质量分数为1.O%的CCA-C防腐剂处理材(吸药量为2.53 kg·m-3)和未处理材进行了比较.结果表明:在2种加热介质中经不同温度、不同时间处理后试材的耐腐性均比未处理材高,且随温度的升高、处理时间的延长,耐腐性有较明显的改善;试材在180、200℃分别经不同时间热处理后的耐腐性均低于CCA-C处理材,但在220℃热处理3、5 h后,各试材的质量损失率均为0;若处理温度和时间相同,则热油处理材的耐腐性基本上高于热空气处理材.

  3. 津黑两地大白菜褐腐病病原菌鉴定及生物学特性的比较%Identification and comparison of the biological characteristics of the pathogen causing brown rot of Chinese cabbage in Tianjin and Heilongjiang

    Institute of Scientific and Technical Information of China (English)

    苗国辉; 闻凤英; 张耀伟

    2012-01-01

    采用形态特征观察、致病性测定及rDNA-ITS序列分析等方法对天津、黑龙江两地大白菜褐腐病的病原菌进行鉴定.结果表明,天津、黑龙江两地大白菜褐腐病的病原菌为立枯丝核菌(Rhizoctonia solani Kühn),分离鉴定出TJ和DB两个菌株,分属立枯丝核菌AG-2融合群和AG-1融合群;DB菌株为一新菌株.两菌株菌丝生长最适温度均为25℃,最适pH为7,最适光照为12h.DB菌株菌丝生长速率快于TJ菌株;但TJ菌株先于DB菌株形成菌核,且形成量多.两菌株在碳源、氮源利用和菌核致死温度上也存在差异.%The pathogen of Chinese cabbage brown rot was studied through morphological characteristics, patho-genicity, and ribosomal DNA-ITS sequence. The results showed that the two strains from Chinese cabbage brown rot collected from Tianjin and Heilongjiang were Rhizoctonia solani Kiihn TJ and DB, belonging to anastomosis group AG-2 and anastomosis group AG-1. The DB strain was a new strain. The optimal temperature, pH and illumination for mycelial growth of the two strains were 25 "C , 7 and 12 h, respectively. The mycelial growth rate of the TJ strain was lower than the DB strain. The quantity and rate of sclerotia formation of the TJ strain were greater. There were obvious differences in the use of carbon sources, nitrogen sources and lethal temperature in the two strains.

  4. Involutin is an Fe3+ reductant secreted by the ectomycorrhizal fungus Paxillus involutus during Fenton-based decomposition of organic matter.

    Science.gov (United States)

    Shah, Firoz; Schwenk, Daniel; Nicolás, César; Persson, Per; Hoffmeister, Dirk; Tunlid, Anders

    2015-12-01

    Ectomycorrhizal fungi play a key role in mobilizing nutrients embedded in recalcitrant organic matter complexes, thereby increasing nutrient accessibility to the host plant. Recent studies have shown that during the assimilation of nutrients, the ectomycorrhizal fungus Paxillus involutus decomposes organic matter using an oxidative mechanism involving Fenton chemistry (Fe(2+) + H2O2 + H(+) → Fe(3+) + ˙OH + H2O), similar to that of brown rot wood-decaying fungi. In such fungi, secreted metabolites are one of the components that drive one-electron reductions of Fe(3+) and O2, generating Fenton chemistry reagents. Here we investigated whether such a mechanism is also implemented by P. involutus during organic matter decomposition. Activity-guided purification was performed to isolate the Fe(3+)-reducing principle secreted by P. involutus during growth on a maize compost extract. The Fe(3+)-reducing activity correlated with the presence of one compound. Mass spectrometry and nuclear magnetic resonance (NMR) identified this compound as the diarylcyclopentenone involutin. A major part of the involutin produced by P. involutus during organic matter decomposition was secreted into the medium, and the metabolite was not detected when the fungus was grown on a mineral nutrient medium. We also demonstrated that in the presence of H2O2, involutin has the capacity to drive an in vitro Fenton reaction via Fe(3+) reduction. Our results show that the mechanism for the reduction of Fe(3+) and the generation of hydroxyl radicals via Fenton chemistry by ectomycorrhizal fungi during organic matter decomposition is similar to that employed by the evolutionarily related brown rot saprotrophs during wood decay. PMID:26431968

  5. Using the Resistograph®to distinguish different types of wood rot on living silver fir in Molise (Italy

    Directory of Open Access Journals (Sweden)

    Lasserre B

    2010-10-01

    Full Text Available he study was performed in two silver-fir forests (Abies alba Mill. located in Alto Molise, Province of Isernia: Collemeluccio, near Pescolanciano and Abeti Soprani near Capracotta. The aim of this work was to distinguish different types of wood rot on living silver fir individuals by using the Resistograph® (IML-RESI E400, a device that allows to estimate the variation of wood density by measuring the resistance to micro-perforation. The occurrence of different types of wood rot (white rot and brown rot in living trees was pointed out and discriminated by the device. In the detected deteriorated zones, fungal pathogens and decomposers were isolated and identified, causing either white (Phellinus hartigii, Ganoderma adspersum, Heterobasidion abietinum and Armillaria ostoyae or brown rot (Fomitopsis pinicola.

  6. Species Identification and Variation in the North American Cranberry Fruit Rot Complex

    Science.gov (United States)

    Complex mixtures of pathogenic fungi cause cranberry fruit rot, with the contribution by any given fungus to the disease varying from bed to bed, cultivar to cultivar, season to season, and across regions. Furthermore, population variability within the individual fungal species across growing region...

  7. A new postharvest fruit rot in apple and pear caused by Phacidium lacerum

    Science.gov (United States)

    During surveys for postharvest diseases of apples and pears, an unknown postharvest fruit rot was observed in Washington State. The disease appeared to originate from infection of the stem and calyx tissue of the fruit or wounds on the fruit. An unknown pycnidial fungus was consistently isolated fro...

  8. Creating prescription maps from historical imagery for site-specific management of cotton root rot

    Science.gov (United States)

    Cotton root rot, caused by the soilborne fungus Phymatotrichopsis omnivore, is a severe plant disease that has affected cotton production for over a century. Recent research found that a commercial fungicide, Topguard (flutriafol), was able to control this disease. As a result, Topguard Terra Fungic...

  9. Functional Genomics of Lignocellulose Degradation in the Basidiomycete White Rot Schizophyllum commune

    Energy Technology Data Exchange (ETDEWEB)

    Ohm, Robin A. [Joint Genome Inst., Walnut Creek, CA (United States); Tegelaar, Martin [Utrecht Univ. (Netherlands); Henrissat, Bernard [Univ. of Marseille (France); Brewer, Heather M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Purvine, Samuel O. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Baker, Scott [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Wosten, Han A. B. [Utrecht Univ. (Netherlands); Grigoriev, Igor V. [Joint Genome Inst., Walnut Creek, CA (United States); Lugones, Luis G. [Utrecht Univ. (Netherlands)

    2013-03-01

    White and brown rot fungi are among the most important wood decayers in nature. Although more than 50 genomes of Basidiomycete white and brown rots have been sequenced by the Joint Genome Institute, there is still a lot to learn about how these fungi degrade the tough polymers present in wood. In particular, very little is known about how these fungi regulate the expression of genes involved in lignocellulose degradation. Here, we used transcriptomics, proteomics, and promoter analysis in an effort to gain insight into the process of lignocellulose degradation.

  10. Distribution and prevalence of crown rot pathogens affecting wheat crops in southern Chile

    Directory of Open Access Journals (Sweden)

    Ernesto Moya-Elizondo

    2015-03-01

    Full Text Available Crown rot pathogens are associated with higher losses for wheat crop farmers, but information about the distribution and prevalence of these pathogens in Chile is inadequate. Distribution and prevalence of wheat (Triticum aestivum L. crown rot pathogens were examined in a survey of 48 commercial fields from December 2011 to February 2012 in southern Chile. These fields were located between Collipulli (37°56'00" S; 72°26'39" W and Purranque (40°50'30" S; 73°22'03" W. Severity of crown rot disease was determined through visual assessment of the first internode of 20 tillers obtained from each field. Incidence of crown rot pathogens per field was determined by plating the 20 tillers on Petri plates with 20% potato dextrose agar amended with lactic acid (aPDA medium. Resulting fungal colonies from monoxenic culture were identified by morphological or molecular-assisted identification. Severity of crown rot varied between 11.3% and 80% for individual fields. Culture plate analysis showed 72.2% of stems were infected with some fungus. Fusarium avenaceum, F. graminearum, and F. culmorum, pathogens associated with Fusarium crown rot disease were isolated from 13.5% of tillers. Gaeumannomyces graminis, causal agent of take-all disease in cereals, was isolated from 11.1% of culms. Phaeosphaeria sp., an endophyte and possibly a non-pathogenic fungus, was isolated from 13.9% of tillers. Pathogenic fungi such as Rhizoctonia spp. and Microdochium nivale, other saprophyte, and several unidentified non-sporulating fungi were isolated at frequencies lower than 3% of the total. Fusarium crown rot and take-all were the most prevalent and distributed crown rot diseases present in wheat crops in southern Chile.

  11. Indução de resistência à podridão-parda em pêssegos pelo uso de eliciadores em pós-colheita Induction of resistance to brown-rot on peaches by elicitors use in post-harvest

    Directory of Open Access Journals (Sweden)

    Moeses Andrigo Danner

    2008-07-01

    Full Text Available O objetivo deste trabalho foi avaliar o efeito dos eliciadores acibenzolar-S-metil e proteína harpina, aplicados em pós-colheita, na indução de resistência sistêmica à podridão-parda em pêssegos. O delineamento experimental foi inteiramente casualizado, com quatro repetições, em parcelas subdivididas - com e sem ferimentos provocados aos frutos -, e os tratamentos foram constituídos por: acibenzolar-S-metil (50 mg do i.a. L-1, dois produtos comerciais com proteína harpina (80 mg do i.a. L-1 e uma testemunha (água destilada. Os frutos foram pulverizados, individualmente, com 1 mL de solução aquosa com os tratamentos e, após 12 horas, efetuou-se a inoculação com Monilinia fructicola (0,2 mL da suspensão com concentração de 10(5 esporos mL-1, em cada lado do fruto. Após 60 horas da inoculação, avaliaram-se: a área lesionada, a esporulação e o percentual de controle. Determinaram-se os teores de proteínas totais, açúcares redutores e totais, fenóis, além da atividade da enzima fenilalanina amônia-liase (FAL. Os eliciadores induziram resistência dos frutos a M. fructicola, com redução do desenvolvimento do fungo. O uso dos eliciadores aumentou os teores dos parâmetros bioquímicos avaliados e a atividade da FAL, que esteve relacionada à redução da área lesionada em pêssegos. Os indutores podem contribuir para o manejo integrado da podridão-parda em pêssegos, em pós-colheita.The objective of this work was to evaluate the effects of acibenzolar-S-methyl and harpin protein elicitors, applied in post-harvest, in systemic resistance induction to brown-rot, on peaches. A completely randomized design was utilized, with four replicates, in a split plot scheme - injured or noninjured peaches -, and treatments were constituted of : acibenzolar-S-methyl (50 mg of a.i. L-1, two commercial products with harpin protein (80 mg of a.i. L-1; and control (distilled water. Peaches were sprayed individually with 1 mL of

  12. Identification of potential protein markers of noble rot infected grapes.

    Science.gov (United States)

    Lorenzini, Marilinda; Millioni, Renato; Franchin, Cinzia; Zapparoli, Giacomo; Arrigoni, Giorgio; Simonato, Barbara

    2015-07-15

    The evaluation of Botrytis cinerea as noble rot on withered grapes is of great importance to predict the wine sensory/organoleptic properties and to manage the winemaking process of Amarone, a passito dry red wine. This report describes the first proteomic analysis of grapes infected by noble rot under withering conditions to identify possible markers of fungal infection. 2-D gel electrophoresis revealed that protein profiles of infected and not infected grape samples are significantly different in terms of number of spots and relative abundance. Protein identification by MS analysis allowed to identify only in infected berries proteins of B. cinerea that represent potential markers of the presence of the fungus in the withered grapes. PMID:25722151

  13. Synthetic dye decolorization capacity of white rot fungus Dichomitus squalens

    Czech Academy of Sciences Publication Activity Database

    Eichlerová, Ivana; Homolka, Ladislav; Nerud, František

    2006-01-01

    Roč. 97, - (2006), s. 2153-2159. ISSN 0960-8524 R&D Projects: GA ČR GP206/02/D119 Institutional research plan: CEZ:AV0Z50200510 Keywords : decolorization * dichomitus squalens * laccase Subject RIV: EE - Microbiology, Virology Impact factor: 2.180, year: 2006

  14. Reliability of Poly B-411, a Polymeric Anthraquinone-Based Dye, in Determining the Rot Type Caused by Wood-Inhabiting Fungi

    OpenAIRE

    Cookson, L. J.

    1995-01-01

    In both Basidiomycotina and Ascomycotina, Poly B-411 decolorization was an excellent indicator of the ability to cause white rot: 109 of the 110 isolates of brown rot fungi tested definitely did not decolorize Poly B-411, and 392 of the 401 mainly active isolates of white rot fungi decolorized Poly B-411. The Bavendamm (tannic acid) reaction was a less reliable test: of 74 white rot isolates examined that could not decay wood, 6 decolorized Poly B-411, but 19 gave positive Bavendamm reactions...

  15. Contributions to the study of Pseudopeziza trifolii (Bernh. Fuck. fungus

    Directory of Open Access Journals (Sweden)

    Olga PALL

    1966-08-01

    Full Text Available The present paper communicates the results of the laboratory experiments concerning the behaviour of the Pseudopeziza trifolii (Bernh. Fuck. fungus that produces the clover brown leaf spot, in different culture mediums. The mycelium of the fungus develops at its best on the peptone-glucose-agar medium. The appearance of pycnides of Sporonema phacidioides Desm. type in vitro, has been reported for the fourth time in Romania especially developing on the potatoe-dextrosis-agar and plum-agar mediums.

  16. Rhizoctonia root rot of lentil caused by Rhizoctonia solani AG 2-1

    Science.gov (United States)

    Lentil root rot symptoms were observed in commercial fields in the US Pacific Northwest during the unusually cool and moist spring weather of 2010. Symptoms included sunken lesions on root and stem with brown discoloration, resembling diseases caused by Rhizoctonia solani. Rhizoctonia solani was i...

  17. Enzyme activity in banana fruits rotted by Botryodiplodia theobromae Pat.

    Directory of Open Access Journals (Sweden)

    Nityananda Chakraborty

    2015-06-01

    Full Text Available Peroxidase and polyphenol oxidase activities in fruits of two cultivars of banana, 'champa' and 'kanthali' rotted by Botryodiplodia theobromae Pat. was studied. The enzymes showed much higher activities in infected than that in uninfected 'tissues. Increase in peroxidase activity was evidently inhibited by cycloheximide. Polyphenol oxidase activity was also inhibited in presence of phenylthiourea and Na-diethyldithiocarbamate more strongly by the former. Increase in activities seemed to be due to increased sytheses of the enzymes. In an in vitro culture, the fungus exhibited some peroxidase but no polyphenoloxidase activity.

  18. Pink Mold Rot on Unishiu Orange (Citrus unshiu Mac.) Caused by Trichothecium roseum (Pers.) Link ex Gray in Korea

    OpenAIRE

    Jin-Hyeuk Kwon; Dong-Wan Kang; Okhee Choi; Hong-Sik Shim

    2013-01-01

    In 2012, a pink mold rot was observed on unishiu orange (Citrus unshiu Mac.) fruits at the Wholesale Market for Agricultural Products, Jinju, Korea. The symptom on unishiu orange was a water-soaked lesion on the surface of fruit, which later on enlarged to form softened brown rot lesions. The diseased fruits were covered with pink-colored mold, consisting of conidia and conidiophores of the pathogen. Optimum temperature for mycelial growth was 25oC. Conidia were hyaline, smooth, 2...

  19. Diplodia seriata, cause of black fruit rot in organically grown apples in Holland, Belgium and Northern Germany

    OpenAIRE

    Trapman, Marc; Maxin, Peter; Weber, Roland W. S.

    2008-01-01

    A fruit rot resembling Gloeosporium infections but appearing on fruits prior to harvest was noticed in organic apple orchards in Holland, Belgium and Northern Germany in 2007. Infections were most commonly observed on ‘Elstar’, but other cultivars were also affected. Fruit colonisation progressed in two steps, whereby a latent stage of sunken black lesions in immature fruits gave rise to a rapidly spreading firm brown rot upon fruit ripening. Isolation experiments from both sta...

  20. Disease notes - Bacterial root rot

    Science.gov (United States)

    Bacterial root rot initiated by lactic acid bacteria, particularly Leuconostoc, occurs every year in Idaho sugarbeet fields. Hot fall weather seems to make the problem worse. Although Leuconostoc initiates the rot, other bacteria and yeast frequently invade the tissue as well. The acetic acid bac...

  1. Developmental and Metabolic Plasticity of White-Skinned Grape Berries in Response to Botrytis cinerea during Noble Rot.

    Science.gov (United States)

    Blanco-Ulate, Barbara; Amrine, Katherine C H; Collins, Thomas S; Rivero, Rosa M; Vicente, Ariel R; Morales-Cruz, Abraham; Doyle, Carolyn L; Ye, Zirou; Allen, Greg; Heymann, Hildegarde; Ebeler, Susan E; Cantu, Dario

    2015-12-01

    Noble rot results from exceptional infections of ripe grape (Vitis vinifera) berries by Botrytis cinerea. Unlike bunch rot, noble rot promotes favorable changes in grape berries and the accumulation of secondary metabolites that enhance wine grape composition. Noble rot-infected berries of cv Sémillon, a white-skinned variety, were collected over 3 years from a commercial vineyard at the same time that fruit were harvested for botrytized wine production. Using an integrated transcriptomics and metabolomics approach, we demonstrate that noble rot alters the metabolism of cv Sémillon berries by inducing biotic and abiotic stress responses as well as ripening processes. During noble rot, B. cinerea induced the expression of key regulators of ripening-associated pathways, some of which are distinctive to the normal ripening of red-skinned cultivars. Enhancement of phenylpropanoid metabolism, characterized by a restricted flux in white-skinned berries, was a common outcome of noble rot and red-skinned berry ripening. Transcript and metabolite analyses together with enzymatic assays determined that the biosynthesis of anthocyanins is a consistent hallmark of noble rot in cv Sémillon berries. The biosynthesis of terpenes and fatty acid aroma precursors also increased during noble rot. We finally characterized the impact of noble rot in botrytized wines. Altogether, the results of this work demonstrated that noble rot causes a major reprogramming of berry development and metabolism. This desirable interaction between a fruit and a fungus stimulates pathways otherwise inactive in white-skinned berries, leading to a greater accumulation of compounds involved in the unique flavor and aroma of botrytized wines. PMID:26450706

  2. Developmental and Metabolic Plasticity of White-Skinned Grape Berries in Response to Botrytis cinerea during Noble Rot1[OPEN

    Science.gov (United States)

    Collins, Thomas S.; Vicente, Ariel R.; Doyle, Carolyn L.; Ye, Zirou; Allen, Greg; Heymann, Hildegarde

    2015-01-01

    Noble rot results from exceptional infections of ripe grape (Vitis vinifera) berries by Botrytis cinerea. Unlike bunch rot, noble rot promotes favorable changes in grape berries and the accumulation of secondary metabolites that enhance wine grape composition. Noble rot-infected berries of cv Sémillon, a white-skinned variety, were collected over 3 years from a commercial vineyard at the same time that fruit were harvested for botrytized wine production. Using an integrated transcriptomics and metabolomics approach, we demonstrate that noble rot alters the metabolism of cv Sémillon berries by inducing biotic and abiotic stress responses as well as ripening processes. During noble rot, B. cinerea induced the expression of key regulators of ripening-associated pathways, some of which are distinctive to the normal ripening of red-skinned cultivars. Enhancement of phenylpropanoid metabolism, characterized by a restricted flux in white-skinned berries, was a common outcome of noble rot and red-skinned berry ripening. Transcript and metabolite analyses together with enzymatic assays determined that the biosynthesis of anthocyanins is a consistent hallmark of noble rot in cv Sémillon berries. The biosynthesis of terpenes and fatty acid aroma precursors also increased during noble rot. We finally characterized the impact of noble rot in botrytized wines. Altogether, the results of this work demonstrated that noble rot causes a major reprogramming of berry development and metabolism. This desirable interaction between a fruit and a fungus stimulates pathways otherwise inactive in white-skinned berries, leading to a greater accumulation of compounds involved in the unique flavor and aroma of botrytized wines. PMID:26450706

  3. Gene-for-gene relationships between strawberry and the causal agent of red stele root rot, Phytophthora fragariae var. fragariae.

    NARCIS (Netherlands)

    Weg, van de W.E.

    1997-01-01

    Red stele (red core) root rot is the major soil-borne disease of strawberries (Fragaria spp.) in many areas with cool, moist soil conditions. It is caused by the soil-borne fungus Phytophthora fragariae var. fragariae. Red stele is a quarantine disease in Europe with a zero tolerance for commercial

  4. Some new and noteworthy diseases of poplars in India. [Botryodiplodia sett-rot; Alternaria tip blight; Cladosporium leaf spot; Fusarium pink incrustation

    Energy Technology Data Exchange (ETDEWEB)

    Singh, S.

    1983-09-01

    Four new diseases of poplars namely Botryodiplodia sett-rott, Alternaria tip blight, Cladosporium leaf spot and Fusarium pink incrustation are described in this paper. Botryodiplodia palmarum causes sett-rott of poplars both at pre-sprouting and post-sprouting stage. The pathogen also causes mortality of poplar plants in the field within 4-6 weeks after planting. Alternaria stage of Pleuspora infectoria has been found as the cause of blackening and dying of growing tips and young leaves of a Populus sp. and P. deltoides in nurseries. Cladosporium humile has been recorded as the cause of brown spot followed by crumpling and premature shedding of leaves in P. ciliata, P. nigra and P. alba. The cause of Fusarium incrustation disease on P. cilata has been identified as Fusarium sp. of Gibbosum group. Pathogenicity of Botryodiplodia palmarum and Alternaria stage of Pleospora infectoria was confirmed by artificial inoculations. Brief descriptions of Alternaria, Cladosporium and Fusarium are also given. The paper also gives a short account of some noteworthy diseases recorded on poplars namely Ganoderma root rot, foliage ruts and stem cankers. Ganoderma root-rot is found to reach alarming proportions in closely spaced poplar plantations. Melampsora ciliata, an indigenous rust, is found to attack mainly clones of P. deltoides, P. yunnanensis, P. trichocarpa, P. alba and some cultivars of P. x euramericana in nurseries. A brief account of three types of stem cankers i.e. cankers due to pink disease fungus, Corticium salmonicolor, sun-scaled cankers and cankers associated with slime flux on various clones of P. deltoides is also given.

  5. Ergosterol as a rapid measurement of Ganoderma rot of oil palm

    OpenAIRE

    Paterson, R. R. M.; Lima, Nelson

    2015-01-01

    Palm oil (PO) is a very important commodity for many countries and especially Indonesia and Malaysia who are the predominant producers. PO is used in ca. 30% of supermarket foods, cosmetics, cooking and as biodiesel. The growth of oil palms in plantations is controversial as the production methods contribute to climate change and cause environmental damage [1]. The plant is subjected to a devastating disease in these two countries caused by the white rot fungus Ganoderma. There are no satisfa...

  6. Biodelignification of Lemon Grass and Citronella Bagasse by White-Rot Fungi

    OpenAIRE

    Rolz, C.; Leon, R.; de Arriola, M. C.; Cabrera, S. (Sonia)

    1986-01-01

    Twelve white-rot fungi were grown in solid-state culture on lemon grass (Cymbopogon citratus) and citronella (Cymbopogon winterianus) bagasse. The two lignocellulosic substrates had 11% permanganate lignin and a holocellulose fraction of 58%. After 5 to 6 weeks at 20°C, nine fungi produced a solid residue from lemon grass with a higher in vitro dry matter enzyme digestibility than the original bagasse; seven did the same for citronella. The best fungus for both substrates was Bondarzewia berk...

  7. Diversity and biological control of Sclerotium rolfsii, causal agent of stem rot of groundnut

    OpenAIRE

    Lê, N.C.

    2011-01-01

    Groundnut (Arachis hypogaea L.) is an economically important legume crop in Vietnam and many other countries worldwide. Stem rot disease, caused by the soil-borne fungus Sclerotium rolfsii Sacc., is a major yield limiting factor in groundnut cultivation. Current control methods mostly rely on the extensive use of fungicides and on cultural practices. Both methods are not always effective and repeated fungicide use can lead to resistance development in the pathogen population. To further impro...

  8. Cyanide production by Pseudomonas fluorescens helps suppress black root rot of tobacco under gnotobiotic conditions

    OpenAIRE

    Voisard, Christophe; Keel, Christoph; Haas, Dieter; Dèfago, Geneviève

    1989-01-01

    Pseudomonas fluorescens CHA0 suppresses black root rot of tobacco, a disease caused by the fungus Thielaviopsis basicola. Strain CHA0 excretes several metabolites with antifungal properties. The importance of one such metabolite, hydrogen cyanide, was tested in a gnotobiotic system containing an artificial, iron-rich soil. A cyanidenegative (hcn) mutant, CHA5, constructed by a gene replacement technique, protected the tobacco plant less effectively than did the wild-type CHA0. Complementation...

  9. Basal Root Rot, a new Disease of Teak (Tectona grandis) in Malaysia caused by Phellinus noxius

    OpenAIRE

    Mohd Farid, A.; S. S. Lee; Maziah, Z.; Rosli, H.; Norwati, M.

    2005-01-01

    Basal root rot of teak was first reported from Sabak Bernam, Selangor making this the first report of the disease on teak in Peninsular Malaysia. The fungus found associated with the disease was Phellinus noxious. The disease aggressively killed its host irrespective of the host health status. Bark depression at the root collar which was visible from a distance was the characteristic symptom and the main indicator in identifying the disease in the plantation since above ground symptoms of the...

  10. Effect of irradiation on the potato tubers rotting during storage

    International Nuclear Information System (INIS)

    The potato tubers subjected to irradiation in autumn were found dry and soft rotting more numerous than non-irradiated ones for the whole period of storage and especially in April and May. The above mentioned phenomenon brought about a little quicker elimination of tubers naturally infected by pectinolytic bacteria. Susceptibility of both kinds of tubers was similar to Fusarium sulphureum introduced under a cover tissue. The irradiation of potato tubers in autumn 1986 led to the appearance of some hard tubers with brown ring spots in spring 1987

  11. Occurrence of Fruit Rot of Melon Caused by Sclerotium rolfsii in Korea

    OpenAIRE

    Kwon, Jin-Hyeuk; Chi, Tran Thi Phuong; Park, Chang-Seuk

    2009-01-01

    In 2007 to 2008, a fruit rot of Melon (Cucumis melo L.) caused by Sclerotium rolfsii occurred sporadically in a farmer's vinyl house in Jinju City. The symptoms started with watersoaking lesion and progressed into the rotting of the surface of fruit. White mycelial mats appeared on the lesion at the surface of the fruit and a number of sclerotia formed on the fruit near the soil line. The sclerotia were globoid in shape, 1~3 mm in size, and white to brown in color. The hyphal width was measur...

  12. EFFECT OF WALNUT HEARTWOOD EXTRACTIVES, ACID COPPER CHROMATE, AND BORIC ACID ON WHITE-ROT DECAY RESISTANCE OF TREATED BEECH SAPWOOD

    OpenAIRE

    Vahid Feraydoni,; Seyyed Khalil Hosseinihashemi

    2012-01-01

    This study evaluates the individual and interaction effects of wood extractives, acid copper chromate (ACC), and boric acid (B) on the resistance to fungus of treated wood species. Walnut (Juglans regia L.) heartwood extractives were extracted with hot water, methanol, and ethanol solvents. Test specimens were prepared from beech sapwood (Fagus orientalis) to meet BS 838 (1961) requirements, then exposed to white-rot fungus, Trametes versicolor, for 14 weeks under laboratory conditions. Extra...

  13. Sugarcane residue decomposition by white and brown rot microorganisms

    Science.gov (United States)

    Harvesting sugarcane with chopper harvesters results in up to 10 tons of field crop residue per acre. Residue management by soil microorganism decomposition offers numerous ecological and economical benefits to growers; however, this natural process is dependent on the biotic density, diversity and...

  14. Rhizoctonia root rot (Rhizoctoni solani K ü h n of sugar beet in province Vojvodina

    Directory of Open Access Journals (Sweden)

    Stojšin Vera B.

    2006-01-01

    Full Text Available Sugar beet root rot appears regularly each year, but its intensity depends on agro ecological conditions. The predominant causers of root rot in Vojvodina are fungi from Fusarium genus and species Macrophomina phaseolina. Over the last couple of years, more intense occurrence of Rhizoctonia root rot has been observed. Rhizoctonia solani, the causal agent of root rot is present in sugar beet fields. During 2000-2005, on the territory of Vojvodina, the frequency of Rhizoctonia solani in phytopathological isolations from rotted sugar beet roots was between 0,0-18,2%. The intensity of the disease depends on localities, agro ecological conditions and genotypes. Symptoms of Rhizoctonia root rot were registered at some localities in all regions of Vojvodina: Srem, Banat and Bačka. The disease appearance is above all local. It occurs in small patches, on heavy, non-structured soil and on depressed wet parts of plots. Individual diseased plants can be found during July. Brown rot appears on sugar beet roots, with dried tissue on surface, which is present on the tail as well as on the middle part and the head of root. Tissues with described symptoms are deeper regarding the healthy part of root. On vertical root section, the necrotic changes are clearly visible comparing to tissue section without symptoms. The heavily infected tissue forms fissures on roots in most cases. Besides the above-mentioned symptoms on roots, the plant wilting and leaf handle necrosis as well as leaf dying are also observed. When rot spreads to the whole root head, plants quickly die.

  15. Gibberella Ear Rot of Maize (Zea mays) in Nepal: Distribution of the Mycotoxins Nivalenol and Deoxynivalenol in Naturally and Experimentally Infected Maize

    Science.gov (United States)

    The fungus Fusarium graminearum (sexual stage Gibberella zeae) causes ear rot of maize (Zea mays) and contamination with the 8-ketotrichothecenes nivalenol (NIV) or 4-deoxynivalenol (DON), depending on diversity of the fungal population for the 4-oxygenase gene (TRI13). To determine the importance ...

  16. Identification of 1,8-dihydroxynaphthalene melanin in Monosporascus cannonballus and the analysis of hexaketide and pentaketide compounds produced by wild-type and pigmented isolates of the fungus.

    Science.gov (United States)

    Wheeler, Michael H; Bruton, Benny D; Puckhaber, Lorraine S; Zhang, Jiuxu; Stipanovic, Robert D

    2004-06-30

    Monosporascus cannonballus causes root rot and vine decline in muskmelons and watermelons. Wild types of this fungus often undergo degenerative changes that have been associated with yellow to brown pigmentation, hypovirulence, dsRNA infection, and decreased production of perithecia. In this study, degenerate isolates that produced yellow to brown pigments and no perithecia were obtained from wild-type cultures that had been stored for extended periods of time. Cultures of the degenerate isolates were found to accumulate five related hexaketides when grown on potato-dextrose agar (PDA). In contrast, these hexaketides were present only in minute amounts in wild-type cultures unless grown on NaCl-amended PDA. 1,8-Dihydroxynaphthalene melanin was established to be present in wild-type M. cannonballus and absent in the degenerate isolates. Various melanin-related metabolites, however, were produced by the variants. Tricyclazole in PDA cultures blocked melanin biosynthesis by the wild types but had little effect on hexaketide production by the degenerate isolates. PMID:15212456

  17. Tremella with Edible Fungus

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    (Meiwei Shuang’er)Remove the tremella and edible fungus roots, clean and drain. Slice green peppers and carrots.Heat some oil in a wok, add tremella, edible fungus, green peppers and carrots, and clear stock, salt and sugar. Simmer for two minutes. Add MSG and pepper, remove to a plate, and serve.Features: Attractively black and white.Taste: Crisp and savory.

  18. Laccase activity from the fungus trametes hirsuta using an air-lift bioreactor

    OpenAIRE

    Rodríguez Couto, S.; Rodríguez, A.; Paterson, R. R. M.; Lima, Nelson; Teixeira, J.A.

    2006-01-01

    Aim: To produce high laccase activities from the white-rot fungus Trametes hirsuta in an in-house air-lift bioreactor (ALB). Methods and Results: Trametes hirsuta was grown in a 6-l ALB. A fed-batch strategy with glycerol as an addition resulted in maximum laccase activity of 19 400 U l)1, which was the highest reported from the fungus. Conclusion: The ALB configuration with additional glycerol resulted in high laccase activities. Significance and Impact of the Study: This study p...

  19. Selection of white-rot fungi to formulate complex and coated pellets for Reactive Orange 165 decolourization

    OpenAIRE

    Elgueta, Sebastian; Rubilar, Olga; Lima, Nelson; Diez, M. C.

    2012-01-01

    Six strains of white-rot fungi isolated from southern Chile were evaluated for their ergosterol/biomass correlation and ligninolytic potential in solid medium to formulate pellets for Reactive Orange 165 (RO165) decolourization. The fungus Anthracophyllum discolor was selected to formulate complex pellets (fungal mycelium, sawdust, and activated carbon), coated pellets (complex pellet + alginate) and simple pellets (fungal mycelium). The activity of ligninolytic enzymes (laccase, manganese pe...

  20. Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii

    OpenAIRE

    Floudas, Dimitrios; Held, Benjamin W.; Riley, Robert; Nagy, Laszlo G.; Koehler, Gage; Ransdell, Anthony S.; Younus, Hina; Chow, Julianna; Chiniquy, Jennifer; Lipzen, Anna; Tritt, Andrew; Sun, Hui; Haridas, Sajeet; LaButti, Kurt; Ohm, Robin A

    2015-01-01

    Wood decay mechanisms in Agaricomycotina have been traditionally separated in two categories termed white and brown rot. Recently the accuracy of such a dichotomy has been questioned. Here, we present the genome sequences of the white rot fungus Cylindrobasidium torrendii and the brown rot fungus Fistulina hepatica both members of Agaricales, combining comparative genomics and wood decay experiments. Cylindrobasidium torrendii is closely related to the white-rot root pathogen Armillaria melle...

  1. Insect feeding on spores of a bracket fungus, Elfvingia applanata (Pers.) Karst. (Ganodermataceae, Aphyllophorales)

    OpenAIRE

    Tuno, Nobuko

    1999-01-01

    Insects visiting sporocarps of Elfvingia applanata, a wood-rotting bracket fungus, were examined in Kyoto, central Japan. Mycodrosophila flies (Drosophilidae: Diptera) were predominant and visited the spore-producing sporocarps exclusively. They were observed feeding on the spores, and a number of spores seemed to be alive even after having passed through insects' digestive tracts. In addition, the insects attached a number of spores on their body surfaces. In a rearing experiment with insect...

  2. Root Rot of Balloon Flower (Platycodon grandiflorum) Caused by Fusarium solani and Fusarium oxysporum.

    Science.gov (United States)

    Jeon, Chi Sung; Kim, Gyoung Hee; Son, Kyeong In; Hur, Jae-Seoun; Jeon, Kwon-Seok; Yoon, Jun-Hyuck; Koh, Young Jin

    2013-12-01

    Balloon flower (Platycodon grandiflorum) is a kind of mountain herbs whose roots have restorative properties and the cultivating acreage of balloon flower has been steadily increasing in Korea. More frequent rain and high amount of rainfalls as a result of climate changes predisposed balloon flower to the outbreaks of root rot at high-density cultivation area in recent years. Root crowns were usually discolored into brown to blackish brown at first and the infected plants showed slight wilting symptom at early infection stage. Severely infected roots were entirely rotted and whole plants eventually died at late infection stage. The overall disease severities of root rot of balloon flower were quite variable according to the surveyed fields in Jeonnam, Gyeongnam and Jeju Provinces, which ranged from 0.1% to 40%. The root rot occurred more severely at the paddy or clay soils than the sandy soils and their severities were much higher at lowland than upland in the same localty. The disease increased with aging of the balloon flower. The causal fungi were identified as Fusarium solani and F. oxysporum on the basis of their mycological characteristics. The optimum temperature ranges of their mycelial growths was found to be 24°C. The pathogenic characters of F. solani and F. oxysporum treated by artificial wounding inoculation on healthy roots of balloon flower revealed that F. solani was more virulent than F. oxysporum. This study identified the causal agents of root rot of balloon flower as Fusarium solani and F. oxysporum, probably for the first time. PMID:25288973

  3. Biodegradation of Hevea brasiliensis wood by Rigidoporus lignosus and Phellinus noxius

    Energy Technology Data Exchange (ETDEWEB)

    Geiger, J.P.; Rio, B.; Nicole, M.; Nandris, D.

    1986-01-01

    In vitro wood slats degradation assays reveal that both the white root rot fungus R. lignosus and the brown root rot fungus P. noxius cause a white rot of wood. In vivo (infected tap roots) they cause the same type of decay. Nevertheless lignin determination show the rubber-tree ability to react against the parasite aggression by increased lignification of tissues.

  4. Rhizoctonia seed, seedling, and wet root rot

    Science.gov (United States)

    Wet root rot caused by Rhizoctonia solani Kühn can cause seed and seedling rot of both lentil and chickpea as well as many other agricultural crops worldwide. The pathogen is favored in cool, sandy soil with high organic matter under no-till or reduced-till soil management practices. Survival spor...

  5. 白腐菌在有机固体废弃物堆肥中的研究进展%Application of White-Rot Fungi on Organic Solid Waste Composting

    Institute of Scientific and Technical Information of China (English)

    张婷婷; 吴京科; 祁娜; 孙向阳; 张强; 郝利峰

    2011-01-01

    The white-rot fungus has been applied widely because of its strong degradation ability and special metabolic type. The current status of white-rot fungus applied in organic solid waste composting was reviewed in the paper. The degradation mechanism of lignin by white-rot fungus and the application of white-rot fungi in the bioremediation of heavy metal bio-sorption in composting have been introduced especially. The prospect of white-rot fungi usage in other aspects was put forward.%白腐菌因具有极强的降解能力和特殊的代谢类型,在生物降解和修复中有广阔的应用前景.本文综述了白腐菌应用于有机固体废弃物堆肥的研究现状,主要介绍了白腐菌在堆肥中对难降解木质素的作用以及对重金属污染的修复.同时对白腐菌的应用前景做出展望.

  6. Breeding for fruit rot resistance in Vaccinium macrocarpon

    Science.gov (United States)

    The cranberry fruit rot complex can cause severe crop loss and requires multiple fungicide applications each year. To identify sources of fruit rot resistance, fungicides were withheld from our germplasm collection in 2003 and 2004 and the collection was rated for fruit rot (1-5 scale, 1=no rot, 5=...

  7. Identification of putative candidate genes for red rot resistance in sugarcane (Saccharum species hybrid) using LD-based association mapping.

    Science.gov (United States)

    Singh, Ram K; Banerjee, Nandita; Khan, M S; Yadav, Sonia; Kumar, Sanjeev; Duttamajumder, S K; Lal, Ram Ji; Patel, Jinesh D; Guo, H; Zhang, Dong; Paterson, Andrew H

    2016-06-01

    Red rot is a serious disease of sugarcane caused by the fungus Colletotrichum falcatum that has a colossal damage potential. The fungus, prevalent mainly in the Indian sub-continent, keeps on producing new pathogenic strains leading to breakdown of resistance in newly released varieties and hence the deployment of linked markers for marker-assisted selection for resistance to this disease can fine tune the breeding programme. This study based on a panel of 119 sugarcane genotypes fingerprinted for 944 SSR alleles was undertaken with an aim to identify marker-trait associations (MTAs) for resistance to red rot. Mixed linear model containing population structure and kinship as co-factor detected four MTAs that were able to explain 10-16 % of the trait variation, individually. Among the four MTAs, EST sequences diagnostic of three could be BLAST searched to the sorghum genome with significant sequence homology. Several genes encoding important plant defence related proteins, viz., cytochrome P450, Glycerol-3-phosphate transporter-1, MAP Kinase-4, Serine/threonine-protein kinase, Ring finger domain protein and others were localized to the vicinity of these MTAs. These positional candidate genes are worth of further investigation and possibly these could contribute directly to red rot resistance, and may find a potential application in marker-assisted sugarcane breeding. PMID:26961118

  8. Optimization of Laccase Production using White Rot Fungi and Agriculture Wastes in Solid State Fermentation

    Directory of Open Access Journals (Sweden)

    Hendro Risdianto

    2012-07-01

    Full Text Available Laccase has been produced in a solid state fermentation (SSF using white rot fungi and various lignocellulosic based substrates. White rot fungi used were Marasmius sp, Trametes hirsuta, Trametes versicolor and Phanerochaete crysosporium. The solid substrates employed in this research were collected from agriculture waste which were empty fruit bunches (EFB, rice straw, corn cob, and rice husk. The objective of this research was to determine the most promising fungus, the best solid substrate and the optimal conditions for the production of laccase. The results showed that Marasmius sp. on all solid substrates displayed higher laccase activity than that of any other strain of white rot fungi. Marasmius sp. and solid substrate of rice straw demonstrated the highest laccase activity of 1116.11 U/L on day 10. Three significant factors, i.e. pH, temperature and yeast extract concentration were studied by response surface method on laccase production using Marasmius sp and rice straw. The optimized conditions were pH, temperature and yeast extract concentration of 4.9, 31ºC and 0.36 g/L respectively. The fermentation of Marasmius sp. in SSF on agricultural waste shows a great potential for the production of laccase.

  9. A novel postharvest rot of okra pods caused by Rhizoctonia solani in Brazil Uma nova podridão pós-colheita de frutos de quiabo causada por Rhizoctonia solani

    Directory of Open Access Journals (Sweden)

    Gilmar P. Henz

    2007-06-01

    Full Text Available Okra pods with unusual brown lesions and rot were collected in a local supermarket in Brasília DF. The objective of this paper was to characterize the causal agent, to fulfill Koch's postulates and to determine some conditions conducive to disease. The pathogen was identified as Rhizoctonia solani based on morphological characteristics which fitted the fungus description, such as pale to brown hyphae, with nearly right-angled side branches constricted at the base, hyphal cells 6-10 µm wide with a septum near the base. Five isolates were obtained from infected pods and identified as AG 1-IB anastomosis group. Wounded or unwounded okra pods cv. Santa Cruz 47 were inoculated with mycelium disks of R. solani and kept in humid chambers at 12 ºC or 25 ºC. After seven days at 25 ºC, both wounded and unwounded pods were completely rotted and brown, while those kept at 12 ºC showed small lesions ranging from 0.6 to 1.0 mm only in wounded pods. The pathogen was able to grow in different materials used for assembling crates and packs of horticultural products, such as pinewood, corrugated carton, plastic, Styrofoam and newspaper sheets when kept in humid chambers (24 ºC, 96 % RH. The disease occurrence can be related to careless handling practices and to the transmission of R. solani propagules by infected plant debris or soil particles. This is the first report of Rhizoctonia solani causing postharvest rot in okra pods in Brazil.Frutos de quiabo apresentando podridão e lesões marrons foram coletados em um supermercado de Brasília DF. O objetivo deste trabalho foi identificar o agente causal e comprovar o envolvimento do fungo como causador da doença (Postulados de Koch e determinar algumas condições favoráveis à ocorrência da doença em frutos de quiabo após a colheita. O patógeno foi identificado como Rhizoctonia solani baseado nas suas características morfológicas, como hifas marrons a ocre, com ramificações laterais em

  10. Heterobasidion root rot in Norway spruce

    OpenAIRE

    Thor, Magnus

    2005-01-01

    In spite of its biological and economic impact on Swedish forestry, root rot caused by Heterobasidion annosum (Fr.) Bref. sensu lato has received no or little attention in forest planning. This thesis summarizes and discusses two experiments involving prophylactic treatment of stumps, and three investigations on the modelling and simulation of root rot in coniferous stands with special emphasis on Norway spruce (Picea abies [L.] Karst.). In 14 previously unthinned stands of Norway spruce, the...

  11. Soft Rot of Rhizopus oryzae as a Postharvest Pathogen of Banana Fruit in Korea

    OpenAIRE

    Kwon, Jin-Hyeuk; Ryu, Jae-San; Chi, Tran Thi Phuong; Shen, Shun-Shan; Choi, Okhee

    2012-01-01

    Soft rot on banana fruit caused by Rhizopus oryzae was identified for the first time in Korea. Colonies were white to light brown and formed numerous sporangiospores. Optimum temperature for mycelial growth was 30℃. Sporangia were globose and 30~200 µm. Sporangiophores were usually straight, 8~20 µm, and rhizoids usually in groups of 3~5. Columella were globose to sub-globose and 90~110 µm. Sporangiospores were sub-globose or oval and 4~10 µm. Based on its mycological characteristics, molecul...

  12. Soft Rot of Eggplant (Solanum melongena) Caused by Choanephora cucurbitarum in Korea

    OpenAIRE

    Kwon, Jin-Hyeuk; Jee, Hyeong-Jin

    2005-01-01

    In April 2002 and 2003, soft rot on fruit of eggplant (Solanum melongena) caused by Choanephora cucurbitarum was observed in the experimental fields at Gyeongnam Agricultural Research and Extension Services in Korea. The disease began with water-soaking and dark-green lesions, and then the infected tissues were rapidly rotten. Sporangium was subglobose in shape and sized 40~130 µm. Monosporous sporangiola were elliptic, fusiform or ovoid, brown in color, and measured as 12~20 × 6~14 µm. Spora...

  13. Degradation of Bunker C Fuel Oil by White-Rot Fungi in Sawdust Cultures Suggests Potential Applications in Bioremediation.

    Directory of Open Access Journals (Sweden)

    Darcy Young

    Full Text Available Fungal lignocellulolytic enzymes are promising agents for oxidizing pollutants. This study investigated degradation of Number 6 "Bunker C" fuel oil compounds by the white-rot fungi Irpex lacteus, Trichaptum biforme, Phlebia radiata, Trametes versicolor, and Pleurotus ostreatus (Basidiomycota, Agaricomycetes. Averaging across all studied species, 98.1%, 48.6%, and 76.4% of the initial Bunker C C10 alkane, C14 alkane, and phenanthrene, respectively were degraded after 180 days of fungal growth on pine media. This study also investigated whether Bunker C oil induces changes in gene expression in the white-rot fungus Punctularia strigosozonata, for which a complete reference genome is available. After 20 days of growth, a monokaryon P. strigosozonata strain degraded 99% of the initial C10 alkane in both pine and aspen media but did not affect the amounts of the C14 alkane or phenanthrene. Differential gene expression analysis identified 119 genes with ≥ log2(2-fold greater expression in one or more treatment comparisons. Six genes were significantly upregulated in media containing oil; these genes included three enzymes with potential roles in xenobiotic biotransformation. Carbohydrate metabolism genes showing differential expression significantly accumulated transcripts on aspen vs. pine substrates, perhaps reflecting white-rot adaptations to growth on hardwood substrates. The mechanisms by which P. strigosozonata may degrade complex oil compounds remain obscure, but degradation results of the 180-day cultures suggest that diverse white-rot fungi have promise for bioremediation of petroleum fuels.

  14. Marker recycling via 5-fluoroorotic acid and 5-fluorocytosine counter-selection in the white-rot agaricomycete Pleurotus ostreatus.

    Science.gov (United States)

    Nakazawa, Takehito; Tsuzuki, Masami; Irie, Toshikazu; Sakamoto, Masahiro; Honda, Yoichi

    2016-09-01

    Of all of the natural polymers, lignin, an aromatic heteropolymer in plant secondary cell walls, is the most resistant to biological degradation. White-rot fungi are the only known organisms that can depolymerize or modify wood lignin. Investigating the mechanisms underlying lignin biodegradation by white-rot fungi would contribute to the ecofriendly utilization of woody biomass as renewable resources in the future. Efficient gene disruption, which is generally very challenging in the white-rot fungi, was established in Pleurotus ostreatus (the oyster mushroom). Some of the genes encoding manganese peroxidases, enzymes that are considered to be involved in lignin biodegradation, were disrupted separately, and the phenotype of each single-gene disruptant was analysed. However, it remains difficult to generate multi-gene disruptants in this fungus. Here we developed a new genetic transformation marker in P. ostreatus and demonstrated two marker recycling methods that use counter-selection to generate a multigene disruptant. This study will enable future genetic studies of white-rot fungi, and it will increase our understanding of the complicated mechanisms, which involve various enzymes, including lignin-degrading enzymes, underlying lignin biodegradation by these fungi. PMID:27567720

  15. Gliotoxin-producing endophytic Acremonium sp. from Zingiber officinale found antagonistic to soft rot pathogen Pythium myriotylum.

    Science.gov (United States)

    Anisha, C; Radhakrishnan, E K

    2015-04-01

    Soft rot caused by Pythium sp. is a major cause of economic loss in ginger cultivation. Endophytic fungi isolated from Zingiber officinale were screened for its activity against the soft rot pathogen Pythium myriotylum. Among the isolates screened, an endophytic fungus which was identified as Acremonium sp. showed promising activity against the phytopathogen in dual culture. The selected fungus was cultured in large scale on solid rice media and was extracted with ethyl acetate. The crude extract was subjected to column chromatography and preparative HPLC to obtain the fraction with the antifungal activity. LC-QTOF-MS/MS analysis of this fraction done using water-acetonitrile gradient identified a mass of m/z 327 (M + H) corresponding to gliotoxin with specific fragments m/z 263, 245, 227, and 111. The result was reconfirmed in negative mode ionization. Gliotoxin is the major antagonistic peptide produced by the commercially used biocontrol agent, Trichoderma sp., which shows high antagonism against Pythium sp. The gliotoxin production by the isolated endophytic Acremonium sp. of Z. officinale shows the possible natural biocontrol potential of this endophytic fungus. PMID:25820297

  16. Bioremediation of a Chilean Andisol contaminated with pentachlorophenol (PCP) by solid substrate cultures of white-rot fungi.

    Science.gov (United States)

    Rubilar, O; Tortella, G; Cea, M; Acevedo, F; Bustamante, M; Gianfreda, L; Diez, M C

    2011-02-01

    This study provides a first attempt investigation of a serie of studies on the ability of Anthracophyllum discolor, a recently isolated white-rot fungus from forest of southern Chile, for the treatment of soil contaminated with pentachlorophenol (PCP) to future research on potential applications in bioremediation process. Bioremediation of soil contaminated with PCP (250 and 350 mg kg⁻¹ soil) was investigated with A. discolor and compared with the reference strain Phanerochaete chrysosporium. Both strains were incorporated as free and immobilized in wheat grains, a lignocellulosic material previously selected among wheat straw, wheat grains and wood chips through the growth and colonization of A. discolor. Wheat grains showed a higher growth and colonization of A. discolor, increasing the production of manganese peroxidase (MnP) activity. Moreover, the application of white-rot fungi immobilized in wheat grains to the contaminated soil favored the fungus spread. In turn, with both fungal strains and at the two PCP concentrations a high PCP removal (70-85%) occurred as respect to that measured with the fungus as free mycelium (30-45%). Additionally, the use of wheat grains in soil allowed the proliferation of microorganisms PCP decomposers, showing a synergistic effect with A. discolor and P. chrysosporium and increasing the PCP removal in the soil. PMID:20512655

  17. Comparative study on using carbon or nitrogen limited medium to culture white rot fungi for reactive brilliant red dye K-2BP decolotization under non-sterile conditions

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    In order to explore ways for the application of white rot fungus in dye effluent treatment under non-sterile conditions, experiment on decolorization of reactive brilliant red was carried out, employing nitrogen-limited and carbon-limited medium with C/N ratio of 56/2.2 and 28/44 (in mmol/L), respectively. The results showed that the decolorization rate reached 92% while culturing white rot fungus with nitrogen-limited medium; however, the decolorization process ended in carbon-limited medium (n(C)/n(N) = 28/44) because of bacterial contamination. In addition, pH rose up to 9.31 after 4 d of decolorization, which was caused by bacterial contamination in the carbon-limited system. Therefore, it is concluded that nitrogen-limited medium can inhibit bacterial growth to some extent while carbon-limited medium is more easily contaminated by bacteria. Nitrogen-limited medium is more suitable in culture of white rot fungus for decolorization of reactive dye. Medium with the ability of inhibiting yeast growth should be developed by adjusting other components of nitrogen-limited medium.

  18. Atmospheres of Brown Dwarfs

    CERN Document Server

    Helling, Christiane

    2014-01-01

    Brown Dwarfs are the coolest class of stellar objects known to date. Our present perception is that Brown Dwarfs follow the principles of star formation, and that Brown Dwarfs share many characteristics with planets. Being the darkest and lowest mass stars known makes Brown Dwarfs also the coolest stars known. This has profound implication for their spectral fingerprints. Brown Dwarfs cover a range of effective temperatures which cause brown dwarfs atmospheres to be a sequence that gradually changes from a M-dwarf-like spectrum into a planet-like spectrum. This further implies that below an effective temperature of < 2800K, clouds form already in atmospheres of objects marking the boundary between M-Dwarfs and brown dwarfs. Recent developments have sparked the interest in plasma processes in such very cool atmospheres: sporadic and quiescent radio emission has been observed in combination with decaying Xray-activity indicators across the fully convective boundary.

  19. Gene-for-gene relationships between strawberry and the causal agent of red stele root rot, Phytophthora fragariae var. fragariae.

    OpenAIRE

    Weg, van de, W.E.

    1997-01-01

    Red stele (red core) root rot is the major soil-borne disease of strawberries (Fragaria spp.) in many areas with cool, moist soil conditions. It is caused by the soil-borne fungus Phytophthora fragariae var. fragariae. Red stele is a quarantine disease in Europe with a zero tolerance for commercial stock plants. Any lot of such plants with even just a trace of the disease has to be destroyed. The plot on which the plants were harvested has to be abandoned for commercial strawberry propagation...

  20. Brown Fat Cell Isolation

    OpenAIRE

    sprotocols

    2014-01-01

    Author: C.R. Kahn ### 1.) ISOLATION AND PRIMARY CULTURE OF BROWN FAT PREADIPOCYTES ### Rationale: To prepare primary brown preadipocytes for immortalization: useful for metabolic studies from knockout mice. This consists of the following five protocols. References: Fasshauer, M., J. Klein, K M. Kriauciunas, K. Ueki, M.Benito, and C.R. Kahn. 2001. Essential role of insulin substrate 1 in differentiation of brown adipocytes. *Mol Cell Biol* 21: 319-329. Fasshauer, M....

  1. 7 CFR 51.1563 - Soft rot or wet breakdown.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Soft rot or wet breakdown. 51.1563 Section 51.1563... STANDARDS) United States Standards for Grades of Potatoes 1 Definitions § 51.1563 Soft rot or wet breakdown. Soft rot or wet breakdown means any soft, mushy, or leaky condition of the tissue such as slimy...

  2. 7 CFR 51.1582 - Soft rot or wet breakdown.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Soft rot or wet breakdown. 51.1582 Section 51.1582... STANDARDS) United States Consumer Standards for Potatoes Definitions § 51.1582 Soft rot or wet breakdown. Soft rot or wet breakdown means any soft, mushy, or leaky condition of the tissue such as slimy...

  3. Rhizoctonia damping-off stem canker and root rot

    Science.gov (United States)

    Rhizoctonia solani has been reported to cause damping-off and root rot of rhododendrons and azaleas. Damping-off often includes groups of dying and dead seedlings. Decline of rooted plants in containers results from both root rot and stem necrosis below or above the soil line. Root rot is usually no...

  4. Extracellular oxidases and the transformation of solubilised low-rank coal by wood-rot fungi

    Energy Technology Data Exchange (ETDEWEB)

    Ralph, J.P. [Flinders Univ. of South Australia, Bedford Park (Australia). School of Biological Sciences; Graham, L.A. [Flinders Univ. of South Australia, Bedford Park (Australia). School of Biological Sciences; Catcheside, D.E.A. [Flinders Univ. of South Australia, Bedford Park (Australia). School of Biological Sciences

    1996-12-31

    The involvement of extracellular oxidases in biotransformation of low-rank coal was assessed by correlating the ability of nine white-rot and brown-rot fungi to alter macromolecular material in alkali-solubilised brown coal with the spectrum of oxidases they produce when grown on low-nitrogen medium. The coal fraction used was that soluble at 3.0{<=}pH{<=}6.0 (SWC6 coal). In 15-ml cultures, Gloeophyllum trabeum, Lentinus lepideus and Trametes versicolor produced little or no lignin peroxidase, manganese (Mn) peroxidase or laccase activity and caused no change to SWC6 coal. Ganoderma applanatum and Pycnoporus cinnabarinus also produced no detectable lignin or Mn peroxidases or laccase yet increased the absorbance at 400 nm of SWC6 coal. G. applanatum, which produced veratryl alcohol oxidase, also increased the modal apparent molecular mass. SWC6 coal exposed to Merulius tremellosus and Perenniporia tephropora, which secreted Mn peroxidases and laccase and Phanerochaete chrysosporium, which produced Mn and lignin peroxidases was polymerised but had unchanged or decreased absorbance. In the case of both P. chrysosporium and M. tremellosus, polymerisation of SWC6 coal was most extensive, leading to the formation of a complex insoluble in 100 mM NaOH. Rigidoporus ulmarius, which produced only laccase, both polymerised and reduced the A{sub 400} of SWC6 coal. P. chrysosporium, M. tremellosus and P. tephropora grown in 10-ml cultures produced a spectrum of oxidases similar to that in 15-ml cultures but, in each case, caused more extensive loss of A{sub 400}, and P. chrysosporium depolymerised SWC6 coal. It is concluded that the extracellular oxidases of white-rot fungi can transform low-rank coal macromolecules and that increased oxygen availability in the shallower 10-ml cultures favours catabolism over polymerisation. (orig.)

  5. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

    Science.gov (United States)

    Fungi of the phylum Basidiomycota (basidiomycetes) make up some 37% of the described fungi and are important in forestry, agriculture, medicine, and bioenergy. This diverse phylum includes symbionts, pathogens, and saprotrophs including the majority of wood decaying and ectomycorrhizal species. To b...

  6. Father Brown, Selected sories

    NARCIS (Netherlands)

    Chesterton, G.K.

    2005-01-01

    Father Brown, a small, round Catholic priest with a remarkable understanding of the criminal mind, is one of literature's most unusual and endearing detectives, able to solve the strangest crimes in a most fascinating manner. This collection draws from all five Father Brown books, and within their r

  7. Myxomycetes of the rotting cherry wood

    Directory of Open Access Journals (Sweden)

    Wanda Stojanowska

    2014-08-01

    Full Text Available During the years 1974-1975 on rotting cherry wood development of some Myxomycetes was observed. In that time 6 species of slime molds were noted: Arcyria denudata, Comatricha typhoides, Dyctidium cancellatum, Lycogala epidendrum, Physarum cinereum, Stemonitis ferruginea. In the decomposition of organic compounds apart from Myxomycetes other organism (Coprinus dessiminafus also take part.

  8. Everbearing strawberry cultivars - susceptibility to crown rot

    OpenAIRE

    Parikka, Päivi; Karhu, Saila; Hietaranta, Tarja

    2009-01-01

    Studies on the production of everbearing strawberry cultivars were started at MTT Plant Production Research in 2007. MTT Horticulture makes trials in tunnel and open fields to study the growth, yield and overwintering of cultivars in northern conditions. Resistance to crown rot is also being tested.

  9. Integrated Management of Causal Agents of Postharvest Fruit Rot of Apple

    Directory of Open Access Journals (Sweden)

    Mila Grahovac

    2011-01-01

    Full Text Available One of the major causes of poor quality and fruit loss (during storage and transportare diseases caused by phytopathogenic fungi. Economic losses which are the consequenceof the phytopathogenic fungus activity after harvest exceed the losses in the field.Themost important postharvest fungal pathogens of apple fruits are: Botrytis cinerea Pers. exFr., Penicillium expansum (Lk. Thom., Cryptosporiopsis curvispora (Peck. Grem., Colletotrichumgloeosporioides (Penz. Sacc., Monilinia sp., Gloeosporium album Osterw, Alternaria alternata(Fr. Keissler, Cladosporium herbarium Link., Cylindrocarpon mali (Alles. Wollenw., Stemphyliumbotryosum Wallr. The use of available protection technologies can significantly reducelosses caused by pathogens in storage. The concept of integrated pest management (IPMin apple fruits i.e. sustainable approach in control of causal agents of postharvest fruit rot,using cultural, physical, biological and chemical measures, to minimize economic, healthand risks to consumers and environment, is presented in the paper.

  10. Gene cluster involved in melanin biosynthesis of the filamentous fungus Alternaria alternata.

    OpenAIRE

    N. Kimura; Tsuge,T.

    1993-01-01

    The filamentous fungus Alternaria alternata produces melanin, a black pigment, from acetate via 1,8-dihydroxynaphthalene. To isolate a fungal gene required for melanin biosynthesis, we transformed an A. alternata Brm1- (light brown) mutant with the DNA of a wild-type strain genomic library constructed by use of a cosmid carrying the hygromycin B phosphotransferase gene. When hygromycin B-resistant transformants were screened for melanin production, 1 of 1,363 transformants appeared to regain ...

  11. Dactylospora glaucomarioides (Ascomycetes, Dactylosporaceae): A Lichenicolous Fungus New to South Korea

    OpenAIRE

    Joshi, Yogesh; Knudsen, Kerry; Wang, Xin Yu; Hur, Jae-Seoun

    2010-01-01

    The lichenicolous fungi flora of South Korea is poorly known. During recent field trips to various parts of South Korea and after an extensive examination of herbarium lichen specimens, we encountered a lichenicolous fungi growing over a thallus of the lichen Ochrolechia yasudae Vain., characterized by small black apothecia with mostly three-septate brown ascospores. It was identified as Dactylospora glaucomarioides. This is the first report of this lichenicolous fungus from South Korea. A ta...

  12. Dactylospora glaucomarioides (Ascomycetes, Dactylosporaceae): A Lichenicolous Fungus New to South Korea.

    Science.gov (United States)

    Joshi, Yogesh; Knudsen, Kerry; Wang, Xin Yu; Hur, Jae-Seoun

    2010-12-01

    The lichenicolous fungi flora of South Korea is poorly known. During recent field trips to various parts of South Korea and after an extensive examination of herbarium lichen specimens, we encountered a lichenicolous fungi growing over a thallus of the lichen Ochrolechia yasudae Vain., characterized by small black apothecia with mostly three-septate brown ascospores. It was identified as Dactylospora glaucomarioides. This is the first report of this lichenicolous fungus from South Korea. A taxonomic description and comments are presented. PMID:23956673

  13. Dichoptic perception of brown.

    Science.gov (United States)

    DeLawyer, Tanner; Morimoto, Takuma; Buck, Steven L

    2016-03-01

    Two experiments assessed mechanisms underlying brown induction by presenting a foveal target disk and concentric annular surround stimuli that varied in contrast relative to larger backgrounds. Stimuli were presented under monocular, binocular, and dichoptic viewing conditions. Observers adjusted the luminance of the target disk to a criterion brown level. We found evidence for at least two separate mechanisms for brown induction: one mechanism that is dependent on physically contiguous contrast and operates in monocular pathways and another mechanism that responds to high luminance contrast anywhere in the visual field and can operate after convergence of signals from the two eyes. PMID:26974916

  14. Removal of trace organic contaminants by an MBR comprising a mixed culture of bacteria and white-rot fungi.

    Science.gov (United States)

    Nguyen, Luong N; Hai, Faisal I; Yang, Shufan; Kang, Jinguo; Leusch, Frederic D L; Roddick, Felicity; Price, William E; Nghiem, Long D

    2013-11-01

    The degradation of 30 trace organic contaminants (TrOC) by a white-rot fungus-augmented membrane bioreactor (MBR) was investigated. The results show that white-rot fungal enzyme (laccase), coupled with a redox mediator (1-hydroxy benzotriazole, HBT), could degrade TrOC that are resistant to bacterial degradation (e.g. diclofenac, triclosan, naproxen and atrazine) but achieved low removal of compounds (e.g. ibuprofen, gemfibrozil and amitriptyline) that are well removed by conventional activated sludge treatment. Overall, the fungus-augmented MBR showed better TrOC removal compared to a system containing conventional activated sludge. The major role of biodegradation in removal by the MBR was noted. Continuous mediator dosing to MBR may potentially enhance its performance, although not as effectively as for mediator-enhanced batch laccase systems. A ToxScreen3 assay revealed no significant increase in the toxicity of the effluent during MBR treatment of the synthetic wastewater comprising TrOC, confirming that no toxic by-products were produced. PMID:24050925

  15. Tow-step degradation of pyrene by white-rot fungi and soil microorganisms

    International Nuclear Information System (INIS)

    The effect of soil microorganisms on mineralization of 14C-labelled pyrene by white-rot fungi in solid-state fermentation was investigated. Two strains of white-rot fungi, Dichomitus squalens and a Pleurotus sp., were tested. The fungi were incubated on milled wheat straw contaminated with [14C]pyrene for 15 weeks. CO2 and 14CO2 liberated from the cultures were determined weekly. To study the effect of soil microorganisms on respiration and [14C]pyrene mineralization in different periods of fungal development, the fungal substrate was covered with soil at different times of incubation (after 0, 1, 3, 5, 7, 9 or 11 weeks). The two fungi showed contrasting ecological behaviour in competition with the soil microflora. Pleurotus sp. was highly resistant to microbial attack and had the ability to penetrate the soil. D. squalens was less competitive and did not colonize the soil. The resistance of the fungus was dependent on the duration of fungal preincubation. Mineralization of [14C]pyrene by mixed cultures of D. squalens and soil microorganisms was higher than by the fungus or the soil microflora alone when soil was added after 3 weeks of incubation or later. With Pleurotus sp., the mineralization of [14C]pyrene was enhanced by the soil microflora irrespective of the time of soil application. With D. squalens, which in pure culture mineralized less [14C]pyrene than did Pleurotus sp., the increase of [14C]pyrene mineralization caused by soil application was higher than with Pleurotus sp. (orig.)

  16. Evaluation of natural plant extracts, antagonists and fungicides in controlling root rot, collar rot, fruit (brown rot and gummosis of citrus caused by Phytophthora spp. in vitro

    Directory of Open Access Journals (Sweden)

    G.P. Jagtap

    2012-07-01

    Full Text Available The results revealed that all the six bioagents tested in vitro applying dual culture technique against Phytophthora nicotianae, Phytophthora citrophthora and Phytophthora palmivora significantly inhibited the mycelial growth of the test pathogen over untreated control. However, bioagent, Trichoderma harzianum recorded minimum mean colony diameter (7.73 cm2 and highest inhibition (87.85% of mycelial growth of P. nicotianae over untreated control followed by the bioagent T. viride, T. koningii which recorded mean colony diameter of 9.95 cm2, 14.15 cm2 and mean mycelial inhibition of 84.36 %, 77.76%, respectively. Evaluation of different botanicals by Poisoned Food Technique showed that all plant extracts tested in vitro were found significantly effective in reducing the percentage mycelial growth of P. nicotianae, P. citrophthora and P. palmivora over untreated control. However, plant extract (@ 5, 10 and 15% of Garlic, recorded lowest mean colony diameter (47.45 mm and highest mean mycelial growth inhibition (47.26% followed by Neem, Onion which recorded the mycelial growth of 55.20 mm, 60.85 mm, and the mean mycelial growth inhibition of 38.65%, 32.38%, respectively. Results revealed that all the nine fungicides tested in vitro applying Poisoned Food Technique against P. nicotianae, P. citrophthora and P. palmivora significantly inhibited the mycelial growth of the test pathogen over untreated control. However, fungicide, Cymoxynil 8% + Mancozeb 64% (Curzate M-8 recorded minimum mean colony diameter (16.12 mm and maximum mean inhibition (82.09% of mycelial growth of the test pathogen over untreated control (mean colony diameter 90.00 mm and mean inhibition 0.00 followed by the fungicide Metalaxyl-M 4% + Mancozeb 64% (Ridomil Gold, Metyram (Polyram, which recorded mean colony diameter of 20.16 mm, 24.16 mm and mean mycelial inhibition of 77.59%, 73.14%, respectively.

  17. Lignin-modifying enzymes of the white rot basidiomycete Ganoderma lucidum

    Energy Technology Data Exchange (ETDEWEB)

    D/Souza, T.M.; Merritt, C.S.; Reddy, C.A.

    1999-12-01

    Ganoderma lucidum, a white rot basidiomycete widely distributed worldwide, was studied for the production of the lignin-modifying enzymes laccase, manganese-dependent peroxidase (MnP), and lignin peroxidase (LiP). Laccase levels observed in high-nitrogen shaken cultures were much greater than those seen in low-nitrogen, malt extract, or wool-grown cultures and those reported for most other white rot fungi to date. Laccase production was readily seen in cultures grown with pine or poplar as the sole carbon and energy source. Cultures containing both pine and poplar showed 5- to 10-fold-higher levels of laccase than cultures containing pine or poplar alone. Since syringyl units are structural components important in poplar lignin and other hardwoods but much less so in pine lignin and other softwoods, pine cultures were supplemented with syringic acid, and this resulted in laccase levels comparable to those seen in pine-plus-poplar cultures. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis of concentrated extracellular culture fluid from HM cultures showed two laccase activity bands, where as isoelectric focusing revealed five major laccase activity bands with estimated pIs of 3.0, 4.25, 4.5, and 5.1. Low levels of MnP activity were detected in poplar-grown cultures but not in cultures grown with pine, with pine plus syringic acid, or in HN medium. No LiP activity was seen in any of the media tested; however, probing the genomic DNA with the LiP cDNA (CLG4) from the white rot fungus Phanerochaete chrysosporium showed distinct hybridization bands suggesting the presence of lip-like sequences in G. lucidum.

  18. Improvement of garlic resistance to white rot disease and its productivity and storability using gamma radiation

    International Nuclear Information System (INIS)

    A mutation program was conducted to improve garlic (Allium sativum) resistance to white rot (Sclerotium cepivorum) and to improve its storability under natural conditions. Cloves of two local garlic cultivars (Kisswany and Yabroudy) were irradiated with gamma ray doses 4, 5, 6, and 7 gray. The cloves were then planted in the field and plants were advanced for 4 generations in order to isolate mutations in stable form. The results indicated that the cultivar Yabroudy was more sensitive to gamma irradiation than Kisswany. Rate of morphological mutants increased with increasing gamma ray dosage. Selection pressure against white rot disease was applied starting in the second generation by adding infected garlic leaves to the soil. In the third and fourth generations, however, full selection pressure was applied by inoculating the cloves with the fungus sclerotia and planting them in a soil previously planted with infected garlic plants. healthy garlic bulbs were harvested and stored under natural conditions and then planted to obtain the next generation. By the end of the fourth generation, we have been able to improve garlic resistance to white rot disease and its storability. Twenty four mutant lines from each garlic cultivar have been selected. Out of the selected lines, twelve lines from cultivar Kisswany had only 3% infection percentage as compared to 29% in the control, and twelve lines from cultivar Yabroudy had less than 5% infection percentage as compared to 20% in the control. Also, we have been able to improve storability under natural conditions. Weight loss during storage decreased from 8.25% in the control to only 4% in some Kisswany lines and from 10% to 3% in some Yabroudy lines. However, we have not been able to increase the bulb weight over the control but the weights of the selected lines were comparable to those of the control. (author)

  19. Improvement of garlic resistance to white rot disease and its productivity and storability using gamma radiation

    International Nuclear Information System (INIS)

    A mutation program was conducted to improve garlic (Allium sativum) resistance to white rot (Sclerotium cepivorum) and to improve its storability under natural conditions. Cloves of two local garlic cultivars (Kisswany and Yabroudy) were irradiated with gamma ray doses 4, 5, 6 and 7 gray. The cloves were then planted in the the field and plants were advanced for 4 generations in order to isolate mutations in stable form. The results indicated that the cultivar Yabroudy was more sensitive to gamma irradiation than Kisswany. Rate of morphological mutants increased with increasing gamma ray dosage. Selection pressure against white rot disease was applied starting in the second generation by adding infected garlic leaves to the soil. In the third and fourth generations, however, full selection pressure was applied by inoculating the cloves with the fungus sclerotic and planting them in a soil previously planted with infected garlic plants. Healthy garlic bulbs were harvested and stored under natural conditions and then planted to obtain the next generation. By the end of the fourth generation, we have been able to improve garlic resistance to white rot disease and its storability. Twenty four mutant lines from each garlic cultivar have been selected. Out of the selected lines, twelve lines from cultivar Kisswany had only 3% infection percentage as compared to 29% in the control, and twelve lines from cultivar Yabroudy had less than 5% infection percentage as compared to 20% in the control. Also, we have been able to improve storability under natural conditions. Weight loss during storage decreased from 8.25% in the control to only 4% in some Kisswany lines and from 10% to 3% in some Yabroudy lines. However, we have not been able to increase the bulb weight over the control but the weights of the selected lines were comparable to those of the control. (authors)

  20. Biological treatment of paper pulp effluents: the application of ligninolytic white rot-fungi

    International Nuclear Information System (INIS)

    Biological treatments using white-rot fungi, based in their ability to degrade lignin, can constitute an interesting approach to remove colour and toxic compounds usually contained in paper pulp effluents due to the presence of recalcitrant lignin derived molecules. In this work, strains A-137 and A-136 (IJFM collection, CIB-CSIC, Madrid) of Trameles versicolor, a ligninolytic white-rot fungus that have been frequently reported in relation to degradation of lignin, have been used for decolorisation studies of the straw alkaline-pulping effluent from SAICA factory (Zaragoza, Spain). From results obtained it can be concluded that decolorisation percentages about 80% can be obtained in 4-6 days (for maximum initial colour effluent between 12,000 and 15,000 CU) and total phenolics content can be reduced in about 90%. Mn-dependent peroxidase (about 20 IU/I) and high values of laccase activities (up to 700 IU/I) were produced, what may be of great interest to set up ligninolytic enzymes production processes for industrial uses. (Author) 19 refs

  1. Biological treatment of paper pulp effluents: the application of ligninolytic white rot-fungi

    Energy Technology Data Exchange (ETDEWEB)

    Martin, C; Fajardo, S.; Manzanares, P.

    1996-07-01

    Biological treatments using white-rot fungi, based in their ability to degrade lignin, can constitute an interesting approach to remove colour and toxic compounds usually contained in paper pulp effluents due to the presence of recalcitrant lignin derived molecules. In this work, strains A-137 and A-136 (IJFM collection, CIB-CSIC, Madrid) of Trameles versicolor, a ligninolytic white-rot fungus that have been frequently reported in relation to degradation of lignin, have been used for decolorisation studies of the straw alkaline-pulping effluent from SAICA factory (Zaragoza, Spain). From results obtained it can be concluded that decolorisation percentages about 80% can be obtained in 4-6 days (for maximum initial colour effluent between 12,000 and 15,000 CU) and total phenolics content can be reduced in about 90%. Mn-dependent peroxidase (about 20 IU/I) and high values of laccase activities (up to 700 IU/I) were produced, what may be of great interest to set up ligninolytic enzymes production processes for industrial uses. (Author) 19 refs.

  2. Decolorization of high concenrations of synthetic dyes, by the white rot fungus Bjerkandera adusta

    Czech Academy of Sciences Publication Activity Database

    Eichlerová, Ivana; Homolka, Ladislav; Nerud, František

    2007-01-01

    Roč. 75, - (2007), s. 38-44. ISSN 0143-7208 Institutional research plan: CEZ:AV0Z50200510 Keywords : bjerkandera adusta * decolorization * ligninolytic enzymes Subject RIV: EA - Cell Biology Impact factor: 2.796, year: 2007

  3. Manganese regulation of manganese peroxidase expression and lignin degradation by the white rot fungus Dichomitus squalens

    International Nuclear Information System (INIS)

    Extracellular manganese peroxidase and laccase activities were detected in cultures of Dichomitus squalens (Polyporus anceps) under conditions favoring lignin degradation. In contrast, neither extracellular lignin peroxidase nor aryl alcohol oxidase activity was detected in cultures grown under a wide variety of conditions. The mineralization of 14C-ring-, -side chain-, and -methoxy-labeled synthetic guaiacyl lignins by D. squalens and the expression of extracellular manganese peroxidase were dependent on the presence of Mn(II), suggesting that manganese peroxidase is an important component of this organism's lignin degradation system. The expression of laccase activity was independent of manganese. In contrast to previous findings with Phanero-chaete chrysosporium, lignin degradation by D. squalens proceeded in the cultures containing excess carbon and nitrogen

  4. Purification and characterization of laccase from the white-rot fungus daedalea quercina

    Czech Academy of Sciences Publication Activity Database

    Baldrian, Petr

    Ljubljana, 2003, s. 463. [FEMS Congress of European Microbiologists /2003./. Ljubljana (SI), 29.06.2003-03.07.2003] R&D Projects: GA AV ČR IAB5020202 Institutional research plan: CEZ:AV0Z5020903 Keywords : daedalea * quercina * mn-perocidase Subject RIV: EE - Microbiology, Virology

  5. Mechanism of Reactive Orange 16 degradation with the white rot fungus Irpex lacteus

    Czech Academy of Sciences Publication Activity Database

    Svobodová, Kateřina; Senholdt, M.; Novotný, Čeněk; Rehorek, A.

    2007-01-01

    Roč. 42, - (2007), s. 1279-1284. ISSN 1359-5113 R&D Projects: GA ČR GP526/06/P102; GA MŠk LC06066; GA AV ČR IAA6020411 Grant ostatní: XE(XE) European STREP project ULTRATEC No. NMP2-CT-2003-505892 Institutional research plan: CEZ:AV0Z50200510 Source of funding: R - rámcový projekt EK Keywords : irpex lacteus * reactive orange 16 * degradation Subject RIV: EE - Microbiology, Virology Impact factor: 2.336, year: 2007

  6. The role of ligninolytic enzymes in the synthetic dyes decolorization process in white rot fungus

    Czech Academy of Sciences Publication Activity Database

    Eichlerová, Ivana; Homolka, Ladislav; Nerud, František

    Napoli Federico, 2004, s. 58. [Ixizymes in Napoles European Meeting /2./. Napoli Federico (IT), 03.06.2004-05.06.2004] R&D Projects: GA ČR GP206/02/D119 Institutional research plan: CEZ:AV0Z5020903 Keywords : phenol red * evans blue Subject RIV: EE - Microbiology, Virology

  7. Biological pretreatment of corn stover with white-rot fungus for enzymatic hydrolysis and bioethanol production

    Science.gov (United States)

    Pretreatment, as the first step towards conversion of lignocellulosic feedstocks to biofuels and/or chemicals remains one of the main barriers to commercial success. Typically, harsh methods are used to pretreat lignocellulosic biomass prior to its breakdown to sugars by enzymes, which also result ...

  8. Manganese regulation of manganese peroxidase expression and lignin degradation by the white rot fungus Dichomitus squalens.

    OpenAIRE

    Périé, F H; Gold, M H

    1991-01-01

    Extracellular manganese peroxidase and laccase activities were detected in cultures of Dichomitus squalens (Polyporus anceps) under conditions favoring lignin degradation. In contrast, neither extracellular lignin peroxidase nor aryl alcohol oxidase activity was detected in cultures grown under a wide variety of conditions. The mineralization of 14C-ring-, -side chain-, and -methoxy-labeled synthetic guaiacyl lignins by D. squalens and the expression of extracellular manganese peroxidase were...

  9. Podridão basal pós-colheita do coco verde no estado do Ceará Post-harvest basal rot of coconut fruits in the State of Ceará, Brazil

    OpenAIRE

    Francisco M. P Viana; FRANCISCO C.O. FREIRE; Beatriz M Barguil; Ricardo E Alves; ANTONIO A. SANTOS; JOSÉ E. CARDOSO; Julio C. Vidal

    2002-01-01

    A new post-harvest disease of coconut (Cocos nucifera) was recently detected in fruits exported to European countries. The main symptoms are the blacking and cracking of basal parts of the fruits. Water oozing may occurs as the infection progresses. The fungus Lasiodiplodia theobromae has been frequently isolated from the lesions. Inoculation tests proved that this pathogen is the causal agent of the coconut fruit basal rot. This is the first occurrence of this post-harvest disease in Brazil.

  10. Secretome discovery reveals lignocellulose degradation capacity of the ectomycorrhizal fungus Paxillus involutus

    DEFF Research Database (Denmark)

    Roth, Doris; Rineau, Francois; Olsen, Peter B.;

    2011-01-01

    To improve our understanding of the role ectomycorrhizal fungi play in biomass conversion, we studied the transcriptome of P. involutus grown on glass beads in extract of soil organic matter. The mycelium was used for a cDNA library screened by Transposon-Assisted Signal Trapping (TAST*) for gene...... brown rot fungi systems. In addition, GH61 apparently acts as accessory protein both in enzymatic and in radical-based cellulolysis. * Becker et al., J. Microbial Methods, 2004, 57(1), 123-33....

  11. Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii.

    Science.gov (United States)

    Floudas, Dimitrios; Held, Benjamin W; Riley, Robert; Nagy, Laszlo G; Koehler, Gage; Ransdell, Anthony S; Younus, Hina; Chow, Julianna; Chiniquy, Jennifer; Lipzen, Anna; Tritt, Andrew; Sun, Hui; Haridas, Sajeet; LaButti, Kurt; Ohm, Robin A; Kües, Ursula; Blanchette, Robert A; Grigoriev, Igor V; Minto, Robert E; Hibbett, David S

    2015-03-01

    Wood decay mechanisms in Agaricomycotina have been traditionally separated in two categories termed white and brown rot. Recently the accuracy of such a dichotomy has been questioned. Here, we present the genome sequences of the white-rot fungus Cylindrobasidium torrendii and the brown-rot fungus Fistulina hepatica both members of Agaricales, combining comparative genomics and wood decay experiments. C. torrendii is closely related to the white-rot root pathogen Armillaria mellea, while F. hepatica is related to Schizophyllum commune, which has been reported to cause white rot. Our results suggest that C. torrendii and S. commune are intermediate between white-rot and brown-rot fungi, but at the same time they show characteristics of decay that resembles soft rot. Both species cause weak wood decay and degrade all wood components but leave the middle lamella intact. Their gene content related to lignin degradation is reduced, similar to brown-rot fungi, but both have maintained a rich array of genes related to carbohydrate degradation, similar to white-rot fungi. These characteristics appear to have evolved from white-rot ancestors with stronger ligninolytic ability. F. hepatica shows characteristics of brown rot both in terms of wood decay genes found in its genome and the decay that it causes. However, genes related to cellulose degradation are still present, which is a plesiomorphic characteristic shared with its white-rot ancestors. Four wood degradation-related genes, homologs of which are frequently lost in brown-rot fungi, show signs of pseudogenization in the genome of F. hepatica. These results suggest that transition toward a brown-rot lifestyle could be an ongoing process in F. hepatica. Our results reinforce the idea that wood decay mechanisms are more diverse than initially thought and that the dichotomous separation of wood decay mechanisms in Agaricomycotina into white rot and brown rot should be revisited. PMID:25683379

  12. Stand tending and root rot in Norway spruce stands - economical effects caused by root rot at different thinning regimes

    International Nuclear Information System (INIS)

    This report is divided into three parts: 1) a literature study describing the most common fungi causing rot in wood and descriptions of various strategies to reduce economic loss from root rot, 2) a check of a model describing the development of butt rot in pure Norway spruce plantations in southern Sweden, and 3) simulated economic effects of root rot in stands with various stand tending. The rot model was used to estimate future rot frequencies in the economic calculations. In order to avoid overestimations of rot frequencies, the calculations were also executed when assuming slower growth of rot than shown in the model. When analysing the economical effects of rot, the following three thinning programmes were used: Program 1: thinning at the ages of 30- and 45 years. Final felling at the ages 50-, 55-, 60-, 65-, and 70 years. Program 2: thinning at the ages of 40- and 60- years. Final felling at the ages 65 and 75 years. Program 3: thinning at the ages of 30-, 40-, 55-, and 70 years. Final felling at the ages 80 and 90 years. With an interest rate of 3%, programme 2 (final felling at the age of 65 years) had the highest value at present. This result was valid when presuming butt rot in the stand as well as when presuming no butt rot in the stand. There was a small difference between the value at present in programme 1 (final felling at the age of 60 years) and in programme 3 (final felling at the age of 80 years). When presuming butt rot in the stand, the value at present in programme 3 decreased somewhat more in comparison to the value at present in programme 1. Compared to no butt rot in the stand, the optimal final felling time appeared five to ten years earlier when assuming butt rot in the stand. Stand tending programme 1 and an interest rate of 3% were used. Interest rates 2 and 4% did not indicate shorter rotation. The calculated optimal time of final felling appeared at the same stand age whether assuming rot preset or not. The results in this study

  13. Pathogenicity of some Rhizoctonia solaniz isolates associated with root/collar rots on the cultivars of bean in greenhouse.

    Science.gov (United States)

    Bohlooli, A; Okhovvat, S M; Javan-Nikkhah, M

    2006-01-01

    One hundred and eighteen isolates of Rhizoctonia solani were gathered from infected roots and hypocotyls of bean (Phaseolus vulgaris L.) grown in the fields of Tehran Province, Iran. Two isolates of the collected samples belonged to binucleate and 81 isolates to multinucleate of R. solani. The multinucleate isolates showed different anastomosis groups as AG-4 (subg. AG-4 HGI, AG-4HGII), AG-6 and AG-2. In greenhouse, pathogenicity tests carried out on bean cv. Naz in randomized design with 4 replications and each replication (pots) with 5 seeds of bean. Infection was done with seeds of wheat which were infected to the fungus with pasteurized soil. Results showed that the highest disease severity was caused by AG-4 (Rs21) isolates, whereas AG-4 (Rs74) isolates were weakly pathogenic with 90% and 21% infection, respectively. In this test the major pathogenic isolates belonged to AG-4 and they caused seed rot and damping-off of bean and AG-6 isolates were non-pathogenic. Five isolates of the fungus with major pathogenicity (Rs7, Rs18, Rs21, Rs62 and Rs71) selected and used for the reaction with different cultivars of bean. In this test, the cultivars and lines of bean (Pinto, red, white, green) studied in factorial experiment as randomized block design with 4 replications (pots). Results showed that none of the cultivars was completely resistant, however green bean cv. Sanry and pinto cv. Shad with number 4.8 disease severities had the highest susceptibility to seed rot and damping-off and red bean cv. Goli with 2.58 had the lowest susceptibility to the infection. Reaction of the cultivars and lines to the isolates of R. solani was significantly different at 1% level. Isolates of the fungus, Rs7, Rs21 with 84%, 90% pathogenicity was more virulent than the others. PMID:17390878

  14. Irradiation and evolution of the gray rot botrytis cinerea at the strawberry plant

    International Nuclear Information System (INIS)

    Strawberry was introduced since french colonization in tunisia as one of plants cultivated. At the end of the 1970's the strawberries (Fragaria ananassa) was developed in area of Cap Bon. grey mold, caused by botrytis cinerea is by far the most widespread and serious of strawberry fruit diseases and an ever-present threat to the crop. A wide variety of symptoms is caused by B. Cinerea such as a rot on fruit and blight on leaves. this fungus causes domages bith in the field and during storage. In order to reduce severity of grey mold, biological control in field and radiation on post-harvest are developed. The objective of this study was to determine the antagonism of some microorganisms against B.Cinerea such as Trichoderma and Bacillus in greenhouse. On the other hand we tested the efficacity of biological products such as Prev-Am and BM 86on enhancing plant defense. For the post-harvest studies, the goal is to provide a wear tool to manage better the fungus by gamma rays radiation. (author). 29 refs

  15. Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize

    Directory of Open Access Journals (Sweden)

    Suzuki Hitoshi

    2012-09-01

    Full Text Available Abstract Background Softwood is the predominant form of land plant biomass in the Northern hemisphere, and is among the most recalcitrant biomass resources to bioprocess technologies. The white rot fungus, Phanerochaete carnosa, has been isolated almost exclusively from softwoods, while most other known white-rot species, including Phanerochaete chrysosporium, were mainly isolated from hardwoods. Accordingly, it is anticipated that P. carnosa encodes a distinct set of enzymes and proteins that promote softwood decomposition. To elucidate the genetic basis of softwood bioconversion by a white-rot fungus, the present study reports the P. carnosa genome sequence and its comparative analysis with the previously reported P. chrysosporium genome. Results P. carnosa encodes a complete set of lignocellulose-active enzymes. Comparative genomic analysis revealed that P. carnosa is enriched with genes encoding manganese peroxidase, and that the most divergent glycoside hydrolase families were predicted to encode hemicellulases and glycoprotein degrading enzymes. Most remarkably, P. carnosa possesses one of the largest P450 contingents (266 P450s among the sequenced and annotated wood-rotting basidiomycetes, nearly double that of P. chrysosporium. Along with metabolic pathway modeling, comparative growth studies on model compounds and chemical analyses of decomposed wood components showed greater tolerance of P. carnosa to various substrates including coniferous heartwood. Conclusions The P. carnosa genome is enriched with genes that encode P450 monooxygenases that can participate in extractives degradation, and manganese peroxidases involved in lignin degradation. The significant expansion of P450s in P. carnosa, along with differences in carbohydrate- and lignin-degrading enzymes, could be correlated to the utilization of heartwood and sapwood preparations from both coniferous and hardwood species.

  16. Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize

    Energy Technology Data Exchange (ETDEWEB)

    Suzuki, Hitoshi; MacDonald, Jacqueline; Syed, Khajamohiddin; Salamov, Asaf; Hori, Chiaki; Aerts, Andrea; Henrissat, Bernard; Wiebenga, Ad; vanKuyk, Patricia A.; Barry, Kerrie; Lindquist, Erika; LaButti, Kurt; Lapidus, Alla; Lucas, Susan; Coutinho, Pedro; Gong, Yunchen; Samejima, Masahiro; Mahadevan, Radhakrishnan; Abou-Zaid, Mamdouh; de Vries, Ronald P.; Igarashi, Kiyohiko; Yadav, Jagit S.; Grigoriev, Igor V.; Master, Emma R.

    2012-02-17

    Background Softwood is the predominant form of land plant biomass in the Northern hemisphere, and is among the most recalcitrant biomass resources to bioprocess technologies. The white rot fungus, Phanerochaete carnosa, has been isolated almost exclusively from softwoods, while most other known white-rot species, including Phanerochaete chrysosporium, were mainly isolated from hardwoods. Accordingly, it is anticipated that P. carnosa encodes a distinct set of enzymes and proteins that promote softwood decomposition. To elucidate the genetic basis of softwood bioconversion by a white-rot fungus, the present study reports the P. carnosa genome sequence and its comparative analysis with the previously reported P. chrysosporium genome. Results P. carnosa encodes a complete set of lignocellulose-active enzymes. Comparative genomic analysis revealed that P. carnosa is enriched with genes encoding manganese peroxidase, and that the most divergent glycoside hydrolase families were predicted to encode hemicellulases and glycoprotein degrading enzymes. Most remarkably, P. carnosa possesses one of the largest P450 contingents (266 P450s) among the sequenced and annotated wood-rotting basidiomycetes, nearly double that of P. chrysosporium. Along with metabolic pathway modeling, comparative growth studies on model compounds and chemical analyses of decomposed wood components showed greater tolerance of P. carnosa to various substrates including coniferous heartwood. Conclusions The P. carnosa genome is enriched with genes that encode P450 monooxygenases that can participate in extractives degradation, and manganese peroxidases involved in lignin degradation. The significant expansion of P450s in P. carnosa, along with differences in carbohydrate- and lignin-degrading enzymes, could be correlated to the utilization of heartwood and sapwood preparations from both coniferous and hardwood species.

  17. Irradiated brown dwarfs

    CERN Document Server

    Casewell, S L; Lawrie, K A; Maxted, P F L; Dobbie, P D; Napiwotzki, R

    2014-01-01

    We have observed the post common envelope binary WD0137-349 in the near infrared $J$, $H$ and $K$ bands and have determined that the photometry varies on the system period (116 min). The amplitude of the variability increases with increasing wavelength, indicating that the brown dwarf in the system is likely being irradiated by its 16500 K white dwarf companion. The effect of the (primarily) UV irradiation on the brown dwarf atmosphere is unknown, but it is possible that stratospheric hazes are formed. It is also possible that the brown dwarf (an L-T transition object) itself is variable due to patchy cloud cover. Both these scenarios are discussed, and suggestions for further study are made.

  18. Fucoidans from brown seaweeds

    DEFF Research Database (Denmark)

    Ale, Marcel Tutor; Meyer, Anne S.

    2013-01-01

    -proliferative effects on cancer cells. Recent work has revealed distinct structural features of fucoidans obtained from different brown seaweed sources. Fucoidans are classically obtained from brown seaweeds by multi-step, hot acid extraction, but the structural and compositional traits, and possibly the bioactivity......Fucoidan or fucoidans cover a family of sulfated fucose-rich polysaccharides, built of a backbone of L-fucose units, and characteristically found in brown seaweeds. Fucoidans have potential therapeutic properties, including anti-inflammatory and anti-coagulant activities, as well as anti......, of the fucoidan polysaccharides are significantly influenced by the extraction parameters. This review discusses the structural features of fucoidans, the significance of different extraction technologies, and reviews enzymatic degradation of fucoidans and the use of fucoidan-modifying enzymes for...

  19. Tolerance to Phytophthora Fruit Rot in Watermelon Plant Introductions

    Science.gov (United States)

    Phytophthora capsici is distributed worldwide, and is an aggressive pathogen with a broad host range infecting solanaceous, leguminaceous, and cucurbitaceous crops. Fruit rot, caused by P. capsici is an emerging disease in most watermelon producing regions of Southeast US. Resistance to fruit rot o...

  20. Cultivar Selection for Sugar Beet Root Rot Resistance

    Science.gov (United States)

    Fungal and bacterial root rots in sugar beet caused by Rhizoctonia solani (Rs) and Leuconostoc mesenteroides subsp. dextranicum (Lm) can lead to root yield losses greater than 50%. To reduce the impact of these root rots on sucrose loss in the field, storage, and factories, studies were conducted t...

  1. Isolation and characterization of a fungus Aspergillus sp. strain F-3 capable of degrading alkali lignin.

    Science.gov (United States)

    Yang, Y S; Zhou, J T; Lu, H; Yuan, Y L; Zhao, L H

    2011-09-01

    A fungus strain F-3 was selected from fungal strains isolated from forest soil in Dalian of China. It was identified as one Aspergillus sp. stain F-3 with its morphologic, cultural characteristics and high homology to the genus of rDNA sequence. The budges or thickened node-like structures are peculiar structures of hyphae of the strain. The fungus degraded 65% of alkali lignin (2,000 mg l(-1)) after day 8 of incubation at 30°C at pH 7. The removal of colority was up to 100% at 8 days. The biodegradation of lignin by Aspergillus sp. F-3 favored initial pH 7.0. Excess acid or alkali conditions were not propitious to lignin decomposing. Addition of ammonium L: -tartrate or glucose delayed or repressed biodegradation activities. During lignin degradation, manganese peroxidase (28.2 U l(-1)) and laccase (3.5 U l(-1))activities were detected after day 7 of incubation. GC-MS analysis of biodegraded products showed strain F-3 could convert alkali lignin into small molecules or other utilizable products. Strain F-3 may co-culture with white rot fungus and decompose alkali lignin effectively. PMID:21350882

  2. EFFECT OF WALNUT HEARTWOOD EXTRACTIVES, ACID COPPER CHROMATE, AND BORIC ACID ON WHITE-ROT DECAY RESISTANCE OF TREATED BEECH SAPWOOD

    Directory of Open Access Journals (Sweden)

    Vahid Feraydoni,

    2012-04-01

    Full Text Available This study evaluates the individual and interaction effects of wood extractives, acid copper chromate (ACC, and boric acid (B on the resistance to fungus of treated wood species. Walnut (Juglans regia L. heartwood extractives were extracted with hot water, methanol, and ethanol solvents. Test specimens were prepared from beech sapwood (Fagus orientalis to meet BS 838 (1961 requirements, then exposed to white-rot fungus, Trametes versicolor, for 14 weeks under laboratory conditions. Extractives of walnut heartwood contributed to increased resistance against fungus attack in the presence of B preservative only. The lowest weight loss (0.12% occurred in the samples treated with 3.5% hot water extract and 1% boric acid, and the highest weight loss occurred in the control samples (23.7%. Results indicated that there was significant difference between the weight loss and actual retention for all treatments, but there was not any significant difference between the weight loss of treatments containing B preservative. The weight loss of samples treated with hot water extract (18.32% was less than samples treated with methanol and ethanol extracts (21.5% and 23.1%, respectively. There was significant difference between the individual and interaction effects of wood extractives on the resistance to fungus of treated wood species. An emulsified mixture of B and walnut heartwood extractives controlled decay fungus on beech wood better than the mixture of ACC and walnut heartwood extractives, but ACC alone controlled decay fungus on beech wood better than the emulsified mixture of ACC and walnut heartwood extractives.

  3. 茄褐纹病研究进展%Research Progress of Eggplant Brown Rot

    Institute of Scientific and Technical Information of China (English)

    马珂; 丁克坚; 汪爱娥

    2005-01-01

    茄褐纹病是茄子的主要病害,在我国南北均有分布.其致病菌是茄褐纹拟茎点霉属,属半知菌亚门真菌.综述了茄褐纹病病原学和抗病技术的研究进展,并指出了存在的问题.

  4. Selecting antagonists for control of postharvest brown rot of stone fruits originating from latent infections

    Science.gov (United States)

    In contrast to biological control of postharvest decays (BCPD) of fruits originating from wound infections after harvest, BCPD originating from latent infections occurring in the orchard has not been developed. This is largely due to the lack of methodology to screen and evaluate microbes for bioco...

  5. Study on Gastrodia elata Brown Rot%天麻褐腐病的研究

    Institute of Scientific and Technical Information of China (English)

    吴大椿; 秦亚平; 秦锋

    2002-01-01

    天麻(Gastrodia elata)球茎变褐腐烂是近年发生的新病害,病球茎率达42.1%.经病原分离鉴定,是由灰葡萄孢(Botrytis cinerea Pers.ex Fr.)所引起.通过室内毒力测定,多菌灵和快宁对该菌EC50分别为66×10-4 mg*mL-1和68×10-4 mg*mL-1.讨论了病害流行的原因,并提出了防治方法.

  6. Induction of in vitro mutation for resistance to potato brown rot (ralstonia solanacearum) disease

    International Nuclear Information System (INIS)

    Six genotypes were selected from M1 V2 generation on the bases on their high yield for assessment of genetic variability using protein and RAPD analysis. The results of RAPD analysis showed that 11 primers generated 56 distinct bands of which 31 (55.4%) were polymorphic. The similarity indices of the six mutants of potato and their parents ranged from 70 to 91%. The highest genetic similarity 91% was found between D 20 mutant and Do (Diamant parent), on the other hand, the lowest genetic similarity 705 was found between S 30, S 40 mutants and their parent S 0 (Spunta). In the artificial experiment under in vitro condition, the irradiated and non-irradiated plant lets of potato were cultured on medium inoculates of the selected genotypes form irradiated population of Diamant and Spunta Cultivar were susceptible except S 20 mutant which was resistant. Protein analysis showed that S 20 genotype (Resistant Mutant) displayed 2 negative unique bands that might be responsible for resistance to R. solanacea rum. (Author)

  7. Yeast microflora of nectarines and their potential for biocontrol of brown rot

    Science.gov (United States)

    Resident fruit microflora has been the source of biocontrol agents for the control of postharvest decays of fruits and the active ingredient in commercialized biocontrol products. With the exception of grapes and apples, information on the resident microflora of other fruits is only fragmentary; ho...

  8. Changes in swelling and water absorption of wood degraded by brown rot fungi

    Czech Academy of Sciences Publication Activity Database

    Frankl, Jiří

    Vol. 778. Stafa-Zürich : Trans Tech Publications, 2013, s. 818-822. ISBN 978-3-03785-812-7. ISSN 1022-6680. [International conference on Structural health assessment of timber structures, SHATIS 2013 /2./. Trento (IT), 04.09.2013-06.09.2013] R&D Projects: GA ČR(CZ) GPP105/11/P628 Institutional support: RVO:68378297 Keywords : timber * physical properties * wood-destroying fungi Subject RIV: JN - Civil Engineering http://www.scientific.net/AMR.778

  9. Potential of Wood-Rotting Fungi to Attack Polystyrene Sulfonate and Its Depolymerisation by Gloeophyllum trabeum via Hydroquinone-Driven Fenton Chemistry.

    Directory of Open Access Journals (Sweden)

    Martin C Krueger

    Full Text Available Synthetic polymers often pose environmental hazards due to low biodegradation rates and resulting accumulation. In this study, a selection of wood-rotting fungi representing different lignocellulose decay types was screened for oxidative biodegradation of the polymer polystyrene sulfonate (PSS. Brown-rot basidiomycetes showed PSS depolymerisation of up to 50 % reduction in number-average molecular mass (Mn within 20 days. In-depth investigations with the most efficient depolymeriser, a Gloeophyllum trabeum strain, pointed at extracellular hydroquinone-driven Fenton chemistry responsible for depolymerisation. Detection of hydroxyl radicals present in the culture supernatants showed good compliance with depolymerisation over the time course of PSS degradation. 2,5-Dimethoxy-1,4-hydroquinone (2,5-DMHQ, which was detected in supernatants of active cultures via liquid chromatography and mass spectrometry, was demonstrated to drive the Fenton processes in G. trabeum cultures. Up to 80% reduction in Mn of PSS where observed when fungal cultures were additionally supplemented with 2,5-dimethoxy benzoquinone, the oxidized from of 2,5-DMHQ. Furthermore, 2,5-DMHQ could initiate the Fenton's reagent-mediated PSS depolymerisation in cell-free systems. In contrast, white-rot fungi were unable to cause substantial depolymerising effects despite the expression of lignin-modifying exo-enzymes. Detailed investigations with laccase from Trametes versicolor revealed that only in presence of certain redox mediators limited PSS depolymerisation occurred. Our results indicate that brown-rot fungi might be suitable organisms for the biodegradation of recalcitrant synthetic polymeric pollutants.

  10. Reaction of Oilseed Rape Cultivars to Sclerotinia Stem Rot in Field Environments

    Institute of Scientific and Technical Information of China (English)

    SUN Jun-ming; HAN Fen-xia; Malgorzata Jedryczka

    2005-01-01

    Sclerotinia sclerotiorum (Lib.) de Bary, as an ubiquitous phytopathogenic Ascomycete fungus capable of infecting a wide range of plants, has increased in importance for oilseed rape production worldwide in recent years. The objective of this research was to determine the effectiveness of two measurements of disease rating in predicting the field reaction of cultivars to sclerotinia stem rot. One hundred and ten cultivars or lines of oilseed rape were repeatedly evaluated the disease severity index (DSI) and lesion length for their resistance to nine isolates of S. sclerotiorum in two field stations.There were greatly significant differences between two stations, among isolates, among population of cultivars for the disease severity index and lesion length, and also significant station×isolate interaction for lesion length and population×isolate interactions for DSI and lesion length, but interactions of station×isolate for DSI were not significant.Cultivars such as Pomorzanin and Lisek consistently had the lowest disease severity ratings in the field tests. However,most of cultivars were susceptible to sclerotinia stem rot in the field test. A positive correlation between the mean DSI and lesion length was found for both isolates (Sc23 and B1). The correlations ranged from 0.23 to 0.83 at various plots, with nine of the twelve correlations significant. The correlations for disease caused by different fungal isolates were statistically significant difference. These correlations ranged from -0.44 to 0.90, with nine of the thirty-two correlations significant. It indicated that resistance to some isolates was significantly correlated and selection of some varieties for resistance to one isolate appeared to improve resistance to other isolates.

  11. Assessment of Basal Stem Rot Disease Distribution in Palm Oil Plantation Using Geographical Information System

    Directory of Open Access Journals (Sweden)

    Tengku Mohd Azahar

    2014-12-01

    Full Text Available Normal 0 false false false EN-US X-NONE X-NONE The concurrent advances in global positioning systems (GPS and Geographical Information Systems (GIS techniques have provided powerful analysis tools for precision agriculture. This study will focus on how Geographical Information System (GIS can help to assess the distribution Basal Stem Rot Diseases (BSR on oil palm plantation. Basal Stem Rot (BSR is caused by Ganoderma Boninense, and it is the most serious disease for oil palm trees in Malaysia. The fungus infects oil palm trees, initially causing yield loss and finally killing the trees. Various factors were previously reported to influence incidence of BSR, such as previous crops, techniques for replanting, types of soils, density and the age of trees. At present, effective and sustainable management strategies to control BSR are hampered mainly by a lack of understanding of mechanisms of disease establishment, development and spread. The study aims to apply spatial analysis methods to investigate the behaviours of BSR. Data for analysis were obtained from oil palm plantation at Teluk Intan, Perak, Malaysia. /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-parent:""; mso-padding-alt:0cm 5.4pt 0cm 5.4pt; mso-para-margin:0cm; mso-para-margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:10.0pt; font-family:"Times New Roman","serif";}

  12. Experimental Study on Decolorization and Degradation of Reactive Brilliant Red X—3B in a White Rot Fungal Biofilm Reacor

    Institute of Scientific and Technical Information of China (English)

    HUANGMin-sheng; HUANGRong; 等

    2001-01-01

    Experimental results of an azo dye(reactive brilliant red X-3B,RBR X-3B) decolorization and degradation in a white rot fungal biofilm reactor were introduced and discussed.The fungal biofilm reactor is highly potential for dye decolorization and degradation with the highest decoloring rate of 95% within 96 hours reaction time at initial pH 4.5 under high nirogen level (HN) (24mmol/L ammonium tartrate)condition.Experimental conditions.such as nutrient nitrogen levels in reaction mixture and initial pH,significantly affected dye decolorization and degradation.Effluents from this bioilm reactor can be well treated to meet the discharging requirements by use of chemical flocculation.RBR X-3B was first absorbed onto fungal biomass and then degraded gradually,The SH-13 fungus monopolized the biofilm throughout the experiments,though the reactor was exposed to open air for 4 months.

  13. Social-insect fungus farming

    DEFF Research Database (Denmark)

    Aanen, Duur Kornelis; Boomsma, Jacobus Jan

    2006-01-01

    Which social insects rear their own food? Growing fungi for food has evolved twice in social insects: once in new-world ants about 50 million years ago; and once in old-world termites between 24 and 34 million years ago [1] and [2] . The termites domesticated a single fungal lineage - the extant...... basidiomycete genus Termitomyces - whereas the ants are associated with a larger diversity of fungal lineages (all basidiomycetes). The ants and termites forage for plant material to provision their fungus gardens. Their crops convert this carbon-rich plant material into nitrogen-rich fungal biomass to provide...

  14. Apelin Enhances Brown Adipogenesis and Browning of White Adipocytes.

    Science.gov (United States)

    Than, Aung; He, Hui Ling; Chua, Si Hui; Xu, Dan; Sun, Lei; Leow, Melvin Khee-Shing; Chen, Peng

    2015-06-01

    Brown adipose tissue expends energy in the form of heat via the mitochondrial uncoupling protein UCP1. Recent studies showed that brown adipose tissue is present in adult humans and may be exploited for its anti-obesity and anti-diabetes actions. Apelin is an adipocyte-derived hormone that plays important roles in energy metabolism. Here, we report that apelin-APJ signaling promotes brown adipocyte differentiation by increasing the expressions of brown adipogenic and thermogenic transcriptional factors via the PI3K/Akt and AMPK signaling pathways. It is also found that apelin relieves the TNFα inhibition on brown adipogenesis. In addition, apelin increases the basal activity of brown adipocytes, as evidenced by the increased PGC1α and UCP1 expressions, mitochondrial biogenesis, and oxygen consumption. Finally, we provide both in vitro and in vivo evidence that apelin is able to increase the brown-like characteristics in white adipocytes. This study, for the first time, reveals the brown adipogenic and browning effects of apelin and suggests a potential therapeutic route to combat obesity and related metabolic disorders. PMID:25931124

  15. Diplonine, a neurotoxin isolated from cultures of the fungus Stenocarpella maydis (Berk.) Sacc. that induces diplodiosis.

    Science.gov (United States)

    Snyman, Leendert D; Kellerman, T Stephanus; Vleggaar, Robert; Flett, Bradley C; Basson, Karin M; Schultz, R Anitra

    2011-08-24

    Diplodiosis is a neuromycotoxicosis of cattle and sheep caused by ingestion of maize infected with the ear-rot fungus Stenocarpella (= Diplodia ) maydis . Apart from ataxia, paresis, and paralysis, the toxin is responsible for stillbirths and neonatal losses characterized by the presence of spongiform degeneration in the white matter of the brain in the offspring of dams exposed to infected maize cobs. In the present study a toxin, named diplonine, which induced neurological signs in guinea pigs resembling some of those occurring in cattle and sheep, was isolated from S. maydis cultures. Purification of diplonine was achieved by methanol extraction followed by chromatographic separation on silica gel and RP-18 stationary phases. The structure and relative configuration of diplonine were defined by analysis of NMR and MS data as (S)-2-amino-2-[(1R,2S)-1-hydroxy-2-methylcyclopropyl]acetic acid or the (S)-2-amino-2-[(1S,2R)-diastereomer. PMID:21780820

  16. Improvement of garlic (Allium Sativum L.) resistance to white rot and storability using gamma irradiation induced mutations

    International Nuclear Information System (INIS)

    A mutation program was conducted to improve garlic (Allium sativum) resistance to white rot (Sclerotium cepivorum) and to improve its storability under natural conditions. Cloves of two local garlic cultivars (Kisswany and Yabroudy) were irradiated with gamma ray doses 4, 5, 6, and 7 gray. The cloves were then planted in the field and plants were advanced for 4 generations in order to isolate mutations in stable form. The results indicated that the cultivar Yabroudy was more sensitive to gamma irradiation than Kisswany. Rate of morphological mutants increased with increasing gamma ray dosage. Selection pressure against white rot disease was applied starting in the second generation by adding infected garlic leaves to the soil. In the third and fourth generations, however, full selection pressure was applied by inoculating the cloves with the fungus sclerotia and planting them in a soil previously planted with infected garlic plants. healthy garlic bulbs were harvested and stored under natural conditions and then planted to obtain the next generation. By the end of the fourth generation, we have been able to improve garlic resistance to white rot disease and its storability. Twenty four mutant lines from each garlic cultivar have been selected. Out of the selected lines, twelve lines from cultivar Kisswany had only 3% infection percentage as compared to 29% in the control, and twelve lines from cultivar Yabroudy had less than 5% infection percentage as compared to 20% in the control. Also, we have been able to improve storability under natural conditions. Weight loss during storage decreased from 8.25% in the control to only 4% in some Kisswany lines and from 10% to 3% in some Yabroudy lines. However, we have not been able to increase the bulb weight over the control but the weights of the selected lines were comparable to those of the control. (author)

  17. [Cutaneous mold fungus granuloma from Ulocladium chartarum].

    Science.gov (United States)

    Altmeyer, P; Schon, K

    1981-01-01

    Cutaneous granulomas due to the mold fungus Ulocladium chartarum (Preuss) are described in a 58 year old woman. This fungus is usually harmless for mammalian. It is thought that a consisting immunosuppression (Brill-Symmer's disease, therapy with corticosteroids) was a priming condition for the infection. The route of infection in this patient described is unknown. PMID:7194869

  18. Root rot diseases of sugar beet

    Directory of Open Access Journals (Sweden)

    Jacobsen Barry J.

    2006-01-01

    Full Text Available Root rot diseases of sugar beet caused by Rhizoctonia solani (AG 2-2 IIIB and AG 2-2 IV, R. crocorum, Aphanomyces cochlioides, Phoma betae, Macrophomina phaeseolina, Fusarium oxysporum f.sp. radicis-betae, Pythium aphanidermatum Phytophthora drechsleri, Rhizopus stolonifer, R. arrhizus and Sclerotium rolfsii cause significant losses wherever sugar beets are grown. However, not all these soil-borne pathogens have been reported in all sugar beet production areas. Losses include reduced harvestable tonnage and reduced white sugar recovery. Many of these pathogens also cause post harvest losses in storage piles. Control for diseases caused by these pathogens include disease resistant cultivars, avoidance of stresses, cultural practices such as water management and the use of fungicides.

  19. Isolation and partial purification of toxin from colletotrichum falcatum: the causal agent of red rot in sugarcane

    International Nuclear Information System (INIS)

    The red rot fungus (Colletotrichum falcatum) spores were isolated from infected stalk pieces of sugarcane and grown on Czapek Dox agar medium to obtain pure culture. Spores were obtained from the pure culture and grown in Czapec Dox liquid medium for further studies. It was observed that the fresh and dry weights of fungal mycellial mat significantly increased with time. In addition, fungal growth resulted in a significant change in the pH of the Czapec Dox growth medium over a period of 35 days and gradually increased from 6.5 in the control medium to 8.4. The fungal toxin was extracted from the growth medium and used to treat cell suspension of a red rot resistant sugarcane cultivar HSF-240. The maximum toxin was produced after 28 days of fungal growth in the growth medium which was ascertained by the dry weight of residue obtained from the ethyl actate fractions, as well as percent mortality of sugarcane cells in suspension. The LD50 value (50% cell mortality) of toxin in ethyl acetate (ETA) fraction was 22.03 days while in water it was 30 days. The fungal toxin extracted in ETA fractions was more effective than the one extracted in water. It was mainly due to high solubility and potency of the toxin in ETA than in water. In general, the maximum toxicity was noted at the 4th week (28 days) which decreased at 5th and 6th week of mycelial growth. (author)

  20. Mungbean plants expressing BjNPR1 exhibit enhanced resistance against the seedling rot pathogen, Rhizoctonia solani.

    Science.gov (United States)

    Vijayan, S; Kirti, P B

    2012-02-01

    Mungbean, Vigna radiata (L.) Wilczek is an important pulse crop that is widely cultivated in semi- arid tropics. The crop is attacked by various soil-borne pathogens like Rhizoctonia solani, which causes dry rot disease and seriously affects its productivity. Earlier we characterized the non-expressor of pathogenesis related gene-1(BjNPR1) of mustard, Brassica juncea, the counterpart of AtNPR1 of Arabidopsis thaliana. Here, we transformed mungbean with BjNPR1 via Agrobacterium tumefaciens. Because of the recalcitrant nature of mungbean, the effect of some factors like Agrobacterium tumefaciens strains (GV2260 and LBA4404), pH, L: -cysteine and tobacco leaf extract was tested in transformation. The transgenic status of 15 plants was confirmed by PCR using primers for nptII. The independent integration of T-DNA in transgenic plants was analyzed by Southern hybridization with an nptII probe and the expression of BjNPR1 was confirmed by RT-PCR. Some of the T(0) plants were selected for detached leaf anti-fungal bioassay using the fungus Rhizoctonia solani, which showed moderate to high level of resistance depending on the level of expression of BjNPR1. The seedling bioassay of transgenic T(2) plants indicated resistance against dry rot disease caused by R. solani. PMID:21584838

  1. Enhanced biodegradation of antibiotic combinations via the sequential treatment of the sludge resulting from pharmaceutical wastewater treatment using white-rot fungi Trametes versicolor and Bjerkandera adusta.

    Science.gov (United States)

    Aydin, Sevcan

    2016-07-01

    While anaerobic treatment is capable of treating pharmaceutical wastewater and removing antibiotics in liquid phases, solid phases may still contain significant amounts of antibiotics following this treatment. The main goal of this study was to evaluate the use of white-rot fungi to remove erythromycin, sulfamethoxazole, and tetracycline combinations from biosolids. The degradation potential of Trametes versicolor and Bjerkandera adusta was evaluated via the sequential treatment of anaerobic sludge. Polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) analyses were used to identify competition between the autochthonous microbial communities and white-rot fungi. Solid-phase treatment using white-rot fungi substantially reduced antibiotic concentrations and toxicity in sludge. According to PCR-DGGE results, there is an association between species of fungus and antibiotic type as a result of the different transformation pathways of fungal strains. Fungal post-treatment of sludge represents a promising method of removing antibiotic combinations, therefore holding a significant promise as an environmentally friendly means of degrading the antibiotics present in sludge. PMID:27033714

  2. Erwinia carotovora extracellular proteases : characterization and role in soft rot

    OpenAIRE

    Kyöstiö, Sirkka R. M.

    1990-01-01

    Erwinia carotovora subsp. carotovora (Ecc) strain EC14, a Gram-negative bacterium, causes soft rot on several crops, including potato. Maceration of potato tuber tissue is caused by secreted pectolytic enzymes. Other cell-degrading enzymes may also have roles in pathogenesis, including cellulases, phospholipases, and protease(s). The objectives of this research were to (1) characterize Ecc extracellular protease (Prt) and (2) elucidate its role in potato soft rot. A gene enc...

  3. Studies Of Enoinia Soft Rot Disease On Potato

    OpenAIRE

    Safni, Irda

    2008-01-01

    E. caroiooora subsp. caroiouora (Ecc), the soft rot bacteria of potato, survives for a long period in lenticels and suberized wounds during storage. The disease is more severe when the environmental conditions favour its development, therefore, managing soft rot disease is a difficult task. Washed and brushed potato tubers, which were artificially inoculated using different inoculation methods, were used in this study to detect the population of Ecc in tuber. The number of Ecc were assessed b...

  4. A new naphthoquinoneimine derivative from the marine algal-derived endophytic fungus Aspergillus niger EN-13

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Cultivation of an endophytic fungus Aspergillus niger EN-13 that was isolated from the inner tissue of the marine brown alga Colpomenia sinuosa resulted in the characterization of a new naphthoquinoneimine derivative, namely, 5,7-dihydroxy-2-[1-(4-methoxy-6-oxo-6H-pyran-2-yl)-2-phenylethylamino]-[ 1,4]naphthoquinone. The structure of the new compound was established on the basis of various NMR spectroscopic analyses including 2D NMR techniques, EI-MS, and HR-ESI-MS. This compound displayed moderate antifungal activity.

  5. Serotonin attenuates biotic stress and leads to lesion browning caused by a hypersensitive response to Magnaporthe oryzae penetration in rice.

    Science.gov (United States)

    Hayashi, Keiko; Fujita, Yoshikatsu; Ashizawa, Taketo; Suzuki, Fumihiko; Nagamura, Yoshiaki; Hayano-Saito, Yuriko

    2016-01-01

    The hypersensitive response (HR) of plants is one of the earliest responses to prevent pathogen invasion. A brown dot lesion on a leaf is visual evidence of the HR against the blast fungus Magnaporthe oryzae in rice, but tracking the browning process has been difficult. In this study, we induced the HR in rice cultivars harboring the blast resistance gene Pit by inoculation of an incompatible M. oryzae strain, which generated a unique resistance lesion with a brown ring (halo) around the brown fungal penetration site. Inoculation analysis using a plant harboring Pit but lacking an enzyme that catalyzes tryptamine to serotonin showed that high accumulation of the oxidized form of serotonin was the cause of the browning at the halo and penetration site. Our analysis of the halo browning process in the rice leaf revealed that abscisic acid enhanced biosynthesis of serotonin under light conditions, and serotonin changed to the oxidized form via hydrogen peroxide produced by light. The dramatic increase in serotonin, which has a high antioxidant activity, suppressed leaf damage outside the halo, blocked expansion of the browning area and attenuated inhibition of plant growth. These results suggest that serotonin helps to reduce biotic stress in the plant by acting as a scavenger of oxygen radicals to protect uninfected tissues from oxidative damage caused by the HR. The deposition of its oxide at the HR lesion is observed as lesion browning. PMID:26603141

  6. Mycolytic enzymes produced by Streptomyces violaceusniger and their role in antagonism towards wood-rotting fungi.

    Science.gov (United States)

    Nagpure, Anand; Choudhary, Bharti; Gupta, Rajinder K

    2014-05-01

    Extracellular mycolytic enzymes produced under submerged fermentation by the fungal antagonist Streptomyces violaceusniger MTCC 3959 were characterized. This streptomycete produced higher amounts of extracellular chitinase and protease during late exponential phase, whereas β-1,3-glucanase production was at peak in mid-stationary phase. Cell-free culture filtrate (CCF) exhibited a broad range of antifungal activity against both white rot and brown rot fungi. The inhibitory activity was completely lost after treatment with proteinase K and heat, indicating that extracellular antifungal metabolites are heat labile and proteinaceous in nature. Optimum pH and temperature for enzyme activity were: 9.0 and 60 °C for chitinase; 6.0 and 60 °C for β-1,3-glucanase; and 9.0 and 70 °C for protease. Mycolytic enzymes were moderately thermostable, and had a wide pH stability range extending from pH 5.0 to 10.0. The zymogram analysis of CCF revealed five chitinase isoenzymes with an apparent molecular weight of 20.8, 33.3, 45.6, 67.4, and 114.8 kDa, one β-1,3-glucanase appeared as a single band of ∼131.8 kDa and four protease isoenzymes with approximate molecular weights of 22.8, 62.52, 74.64, and 120.5 kDa. S. violaceusniger MTCC 3959 produced mycolytic enzymes that can be effectively used for suppression of phytopathogenic basidiomycetes. It has the potential to be an effective biofungicide. PMID:23686763

  7. Primeiro relato da podridão da estipe da pupunheira, causada por Phytophthora palmivora, no estado do Paraná First report of stem rot on peach palm caused by Phytophthora palmivora ain the State of Paraná

    Directory of Open Access Journals (Sweden)

    Álvaro F. dos Santos

    2004-12-01

    Full Text Available Phytophthora palmivora foi isolado de plantas de pupunheira (Bactris gasipaes com sintomas de podridão da estipe, no Paraná, em 2002. Testes de patogenicidade e o subseqüente reisolamento do fungo confirmaram a hipótese de que P. palmivora é o agente causal da podridão do estipe. Este é o primeiro relato de P. palmivora causando podridão do estipe na pupunheira no estado do Paraná.Phytophthora palmivora was isolated from infected peach palm (Bactris gasipaes plants with stem rot symptoms in Paraná State, in 2002. Pathogenicity tests and subsequent reisolations of P. palmivora confirmed the hypothesis that this fungus was the causal agent of the disease. This is the first report of P. palmivora causing stem rot on peach palm (Bactris gasipaes in the southern State of Paraná.

  8. Tune Your Brown Clustering, Please

    DEFF Research Database (Denmark)

    Derczynski, Leon; Chester, Sean; Bøgh, Kenneth Sejdenfaden

    2015-01-01

    Brown clustering, an unsupervised hierarchical clustering technique based on ngram mutual information, has proven useful in many NLP applications. However, most uses of Brown clustering employ the same default configuration; the appropriateness of this configuration has gone predominantly...... unexplored. Accordingly, we present information for practitioners on the behaviour of Brown clustering in order to assist hyper-parametre tuning, in the form of a theoretical model of Brown clustering utility. This model is then evaluated empirically in two sequence labelling tasks over two text types. We...... explore the dynamic between the input corpus size, chosen number of classes, and quality of the resulting clusters, which has an impact for any approach using Brown clustering. In every scenario that we examine, our results reveal that the values most commonly used for the clustering are sub-optimal....

  9. Microsatellite primers for fungus-growing ants

    DEFF Research Database (Denmark)

    Villesen, Palle; Gertsch, P J; Boomsma, JJ

    2002-01-01

    developed primers and earlier published primers that were developed for fungus-growing ants. A total of 20 variable microsatellite loci, developed for six different species of fungus-growing ants, are now available for studying the population genetics and colony kin-structure of these ants.......We isolated five polymorphic microsatellite loci from a library of two thousand recombinant clones of two fungus-growing ant species, Cyphomyrmex longiscapus and Trachymyrmex cf. zeteki. Amplification and heterozygosity were tested in five species of higher attine ants using both the newly...

  10. Microsatellite Primers for Fungus-Growing Ants

    DEFF Research Database (Denmark)

    Villesen Fredsted, Palle; Gertsch, Pia J.; Boomsma, Jacobus Jan (Koos)

    2002-01-01

    developed primers and earlier published primers that were developed for fungus-growing ants. A total of 20 variable microsatellite loci, developed for six different species of fungus-growing ants, are now available for studying the population genetics and colony kin-structure of these ants.......We isolated five polymorphic microsatellite loci from a library of two thousand recombinant clones of two fungus-growing ant species, Cyphomyrmex longiscapus and Trachymyrmex cf. zeteki. Amplification and heterozygosity were tested in five species of higher attine ants using both the newly...

  11. [Induction and measurement of cytochrome P450 in white rot fungi].

    Science.gov (United States)

    Ning, Da-liang; Wang, Hui; Li, Dong

    2009-08-15

    The induction and measurement of cytochrome P450 in white rot fungus Phanerochaete chrysosporium were studied in this work. The spectrophotometric results demonstrated that n-hexane was able to induce the fungal P450 to high level, which facilitated isolation and measurement of microsomal P450. The highest concentration of microsomal P450 could reach 140-160 pmol/mg after 6-h-induction by addition of 2 microL/mL hexane each hour, and the concentration of hexane and incubation time had significant effect on the induction of P450s. After effective induction, the method for isolation and measurement of microsomal P450 with CO difference spectrum was studied and the optimized method was obtained as followed. High-speed disperser and glass homogenizer were used to disrupt cells, which obtained higher amount of microsomal P450 than those from cells disrupted by glass homogenizer, ultrasonicator and bead-beater respectively. To record CO difference spectrum,the sample was bubbled with CO for 40 s at a rate of 3 mL/min (300 microL sample), and the reference cuvette was bubbled with N2 to the same extent. Then, the reducer sodium dithionite was added to a concentration 0.4 mol/L. PMID:19799321

  12. Population genetics of the wood-rotting basidiomycete Armillaria cepistipes in a fragmented forest landscape.

    Science.gov (United States)

    Heinzelmann, Renate; Rigling, Daniel; Prospero, Simone

    2012-09-01

    Armillaria cepistipes is a common wood-rotting basidiomycete fungus found in most forests in Central Europe. In Switzerland, the habitat of A. cepistipes is fragmented because of the presence of major geographical barriers, in particular the Alps, and past deforestation. We analysed the impact of habitat fragmentation on the current spatial genetic structure of the Swiss A. cepistipes population. A total of 167 isolates were sampled across an area of 41 000 km(2) and genotyped at seven microsatellite and four single nucleotide polymorphism (SNP) loci. All isolates belonged to different genotypes which, according to the Bayesian clustering algorithm implemented in Tess, originated from a single gene pool. Our analyses indicate that the overall A. cepistipes population shows little, but significant (F(ST)=0.02), genetic differentiation. Such a situation suggests gene flow is strong, possibly due to long-distance dispersal of airborne basidiospores. This hypothesis is supported by the fact that we could not detect a pattern of isolation by distance. Gene flow is partially restricted by the high mountain ranges of the Alps, as indicated by a signal of spatial autocorrelation detected among genotypes separated by less than about 80-130 km. In contrast, past deforestation seems to have no significant effect on the current spatial population structure of A. cepistipes. This might indicate the existence of a time lag between the current spatial genetic structure and the processes that have induced this specific structure. PMID:22954341

  13. Tolerance of Serpula lacrymans to copper-based wood preservatives

    DEFF Research Database (Denmark)

    Hastrup, Anne Christine Steenkjær; Green, Frederick; Clausen, Carol A.;

    2005-01-01

    containing copper. Twelve isolates of the dry rot fungus S. lacrymans and four other brown-rot species were evaluated for weight loss on wood treated with 1.2% copper citrate, 0.5% ACQ-D, and 0.5% naphthaloylhydroxylamine (NHA). Eleven out of 12 isolates of S. lacrymans were shown to be tolerant towards...

  14. Affect of crop residue on colonization and survival of Phoma sclerotioides

    Science.gov (United States)

    Phoma sclerotioides causes brown root rot (BRR) of alfalfa and root rot of other perennial legumes and some winter hardy grasses. It can survive as a saprophyte on crop debris so crop residues that support the fungus may increase inocula levels. Current management of BRR is based on crop rotation wi...

  15. Evolutionary history of Serpulaceae (Basidiomycota): molecular phylogeny, historical biogeography and evidence for a single transition of nutritional mode

    OpenAIRE

    Kauserud Håvard; Carlsen Tor; Binder Manfred; Engh Ingeborg B; Skrede Inger; Bendiksby Mika

    2011-01-01

    Abstract Background The fungal genus Serpula (Serpulaceae, Boletales) comprises several saprotrophic (brown rot) taxa, including the aggressive house-infecting dry rot fungus Serpula lacrymans. Recent phylogenetic analyses have indicated that the ectomycorrhiza forming genera Austropaxillus and Gymnopaxillus cluster within Serpula. In this study we use DNA sequence data to investigate phylogenetic relationships, historical biogeography of, and nutritional mode transitions in Serpulaceae. Resu...

  16. A new macrocyclic trichochecene from soil fungus

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    From fermentation broth of soil fungus 254-2 obtained from Yunnan province,a new macrocylic trichochecene was isolated.The structure was determined on the basis of spectroscopic evidences especially the 2-D NMR spectra.

  17. Genetic variation between Phytophthora cactorum isolates differing in their ability to cause crown rot in strawberry

    OpenAIRE

    Eikemo, H; Klemsdal, S.S.; Riisberg, I.; Bonants, P.J.M.; Stensvand, A.; Tronsmo, A.M.

    2004-01-01

    Analysis of 44 isolates of Phytophthora cactorum, isolated from strawberry and other hosts, by AFLP showed that the crown rot pathotype is different from leather rot isolates and from P. cactorum isolated from other hosts. 16 of 23 crown rot isolates, including isolates from Europe, Japan, Australia, and New Zealand, were identical in an analysis based on 96 polymorphic bands from seven primer combinations. Leather rot isolates of strawberry could not be distinguished from isolates from other...

  18. Persistence of Gliocephalotrichum spp. causing fruit rot of rambutan (Nephelium lappaceum L.) in Puerto Rico

    Science.gov (United States)

    Worldwide, fruit rot of rambutan is an important problem that limits the storage, marketing and long-distance transportation of the fruit. A complex of pathogens has been reported to cause fruit rot of rambutan and significant post-harvest economic losses. During 2009 and 2011 rambutan fruit rot was...

  19. Genetic variation between Phytophthora cactorum isolates differing in their ability to cause crown rot in strawberry

    NARCIS (Netherlands)

    Eikemo, H.; Klemsdal, S.S.; Riisberg, I.; Bonants, P.J.M.; Stensvand, A.; Tronsmo, A.M.

    2004-01-01

    Analysis of 44 isolates of Phytophthora cactorum, isolated from strawberry and other hosts, by AFLP showed that the crown rot pathotype is different from leather rot isolates and from P. cactorum isolated from other hosts. 16 of 23 crown rot isolates, including isolates from Europe, Japan, Australia

  20. Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs).

    Science.gov (United States)

    Wibberg, Daniel; Jelonek, Lukas; Rupp, Oliver; Kröber, Magdalena; Goesmann, Alexander; Grosch, Rita; Pühler, Alfred; Schlüter, Andreas

    2014-01-01

    Rhizoctonia solani is a soil-borne plant pathogenic fungus of the phylum Basidiomycota. It affects a wide range of agriculturally important crops and hence is responsible for economically relevant crop losses. Transcriptome analysis of the bottom rot pathogen R. solani AG1-1B (isolate 7/3/14) by applying high-throughput sequencing and bioinformatics methods addressing Expressed Sequence Tag (EST) data interpretation provided new insights in expressed genes of this fungus. Two normalized cDNA libraries representing different cultivation conditions of the fungus were sequenced on the 454 FLX (Roche) system. Subsequent to cDNA sequence assembly and quality control, ESTs were analysed applying advanced bioinformatics methods. More than 14 000 transcript isoforms originating from approximately 10 000 predictable R. solani AG1-IB 7/3/14 genes are represented in each dataset. Comparative analyses revealed several differentially expressed genes depending on the growth conditions applied. Determinants with predicted functions in recognition processes between the fungus and the host plant were identified. Moreover, many R. solani AG1-IB ESTs were predicted to encode putative cellulose, pectin, and lignin degrading enzymes. Furthermore, genes playing a possible role in mitogen-activated protein (MAP) kinase cascades, 4-aminobutyric acid (GABA) metabolism, melanin synthesis, plant defence antagonism, phytotoxin, and mycotoxin synthesis were detected. PMID:25209639

  1. Brown coal and the climate

    International Nuclear Information System (INIS)

    The undisputed aims of a sensible energy policy are safety, reasonable prices, environmental compatibility and saving resources. Each energy source and every form of energy conversion and use has specific advantages and disadvantages which must be weighed up. It is in favour of brown coal that it can succeed in international competition and therefore offers security of supply, economy, productivity and employment. The mining and use of brown coal comply with the highest environmental standards, in international comparison. Against this, mining brown coal by strip mining inevitably involves intervention in the environment and the social structure of the coalfield. Burning brown coal to generate electricity in powerstations is specifically connected with high CO2 emission. (orig.)

  2. A Conversation with Larry Brown

    OpenAIRE

    Dasgupta, Anirban

    2005-01-01

    Lawrence D. Brown was born on December 16, 1940 in Los Angeles, California. He obtained his Ph.D. in mathematics from Cornell University in 1964. He has been on the faculty of the University of California, Berkeley, Cornell University, Rutgers University and, most recently, the Wharton School of the University of Pennsylvania, where he holds the Miers Busch Professorship of Statistics. Professor Brown was President of the Institute of Mathematical Statistics in 1992–1993, Coeditor of The Anna...

  3. Genetic control of the fungus Colletotrichum lindemuthianum (Sacc. & Magn.) Scrib. reaction and corona color in the common bean (Phaseolus vulgaris L.)

    OpenAIRE

    Mendonça H.A. de; Santos J.B. dos; Ramalho M.A.P.; Ferreira D.F.

    1998-01-01

    An important trait for common bean (Phaseolus vulgaris L.) cultivars with Carioca type grain is resistance to Colletotrichum lindemuthianum, which causes anthracnose and a pale corona. The present study was conducted to understand the genetic control of common bean reaction to the fungus and of the corona color, to provide guides to future breeding studies. Genotypes P-45, with brown corona, and EMGOPA 201-Ouro, with yellow corona, are resistant to C. lindemuthianum. Cultivar Carioca is susce...

  4. Genome Sequence of Mushroom Soft-Rot Pathogen Janthinobacterium agaricidamnosum.

    Science.gov (United States)

    Graupner, Katharina; Lackner, Gerald; Hertweck, Christian

    2015-01-01

    Janthinobacterium agaricidamnosum causes soft-rot disease of the cultured button mushroom Agaricus bisporus and is thus responsible for agricultural losses. Here, we present the genome sequence of J. agaricidamnosum DSM 9628. The 5.9-Mb genome harbors several secondary metabolite biosynthesis gene clusters, which renders this neglected bacterium a promising source for genome mining approaches. PMID:25883287

  5. Characterisation of erwinias causing blackleg and soft rot in Finland

    OpenAIRE

    Laurila, Jaana; Joutsjoki, Tiina; Lehtinen, Ari; Ahola, Virpi; Hannukkala, Asko; Pirhonen, Minna

    2006-01-01

    Potato stems showing blackleg or wilting were collected during 2003-2004 and the erwinias were isolated based on cavity forming on pectate-containing media followed by anaerobic growth test. Bacteri were also isolated from rotting tubers and from water samples collected from rivers in southern and western Finland.

  6. Root rots of common and tepary beans in Puerto Rico

    Science.gov (United States)

    Root rots are a disease complex affecting common bean and can be severe in bean growing areas in the tropics and subtropics. The presence of several pathogens makes it difficult to breed for resistance because of the synergistic effect of the pathogens in the host and the interaction of soil factors...

  7. Population Structure of the North American Cranberry Fruit Rot Complex

    Science.gov (United States)

    Cranberry fruit rot is caused by a complex of pathogenic fungi. Variation in the populations within this complex from region to region could delay identification of the causal agents(s) and complicate management strategies. Our objective was to assess genetic variation within the four major fruit ro...

  8. Genome Sequence of Mushroom Soft-Rot Pathogen Janthinobacterium agaricidamnosum

    OpenAIRE

    Graupner, Katharina; Lackner, Gerald; Hertweck, Christian

    2015-01-01

    Janthinobacterium agaricidamnosum causes soft-rot disease of the cultured button mushroom Agaricus bisporus and is thus responsible for agricultural losses. Here, we present the genome sequence of J. agaricidamnosum DSM 9628. The 5.9-Mb genome harbors several secondary metabolite biosynthesis gene clusters, which renders this neglected bacterium a promising source for genome mining approaches.

  9. Calibrating echelle spectrographs with Fabry-Pérot etalons

    Science.gov (United States)

    Bauer, F. F.; Zechmeister, M.; Reiners, A.

    2015-09-01

    Context. Over the past decades hollow-cathode lamps have been calibration standards for spectroscopic measurements. Advancing to cm/s radial velocity precisions with the next generation of instruments requires more suitable calibration sources with more lines and fewer dynamic range problems. Fabry-Pérot interferometers provide a regular and dense grid of lines and homogeneous amplitudes, which makes them good candidates for next-generation calibrators. Aims: We investigate the usefulness of Fabry-Pérot etalons in wavelength calibration, present an algorithm to incorporate the etalon spectrum in the wavelength solution, and examine potential problems. Methods: The quasi-periodic pattern of Fabry-Pérot lines was used along with a hollow-cathode lamp to anchor the numerous spectral features on an absolute scale. We tested our method with the HARPS spectrograph and compared our wavelength solution to the one derived from a laser frequency comb. Results: The combined hollow-cathode lamp/etalon calibration overcomes large distortion (50 m/s) in the wavelength solution of the HARPS data reduction software. The direct comparison to the laser frequency comb shows differences of only 10 m/s at most. Conclusions: Combining hollow-cathode lamps with Fabry-Pérot interferometers can lead to substantial improvements in the wavelength calibration of echelle spectrographs. Etalons can provide economical alternatives to the laser frequency comb, especially for smaller projects.

  10. Detecting cotton boll rot with an electronic nose

    Science.gov (United States)

    South Carolina Boll Rot is an emerging disease of cotton, Gossypium hirsutum L., caused by the opportunistic bacteria, Pantoea agglomerans (Ewing and Fife). Unlike typical fungal diseases, bolls infected with P. agglomerans continue to appear normal externally, complicating early and rapid detectio...

  11. Root rot of sugarbeet in the Vojvodina Province

    Directory of Open Access Journals (Sweden)

    Stojšin Vera B.

    2006-01-01

    Full Text Available Large changes introduced in the sugar beet production technology in the Vojvodina Province over last 40 years resulted in changes in the etiology and harmfulness of different agents of sugar beet root diseases. Improvements in cultivation practices reduced the harmfulness of some diseases while increased the harmfulness of others. Some disease agents became obsolete, but others gained importance. New agents of root diseases were found. The most frequent damages, persisting over long periods of time were caused by seedling damping-off, Fusarium root rot, charcoal root rot, parasitic (Rhizomania and non-parasitic root bearding. The parasitic damping-off caused by several fungal species but most frequently by Phoma betae occurred at the time when multigerm seeds were used in combination with extensive cultural practices. The agents of seedling diseases completely lost their significance as the consequence of switching to fungicide - treated monogerm seeds, earlier planting and improved soil tillage. In the period of intensive use of agricultural chemicals, seedling damping-off occurred frequently due to the phytotoxic action of chemicals (insecticides, herbicides and mineral fertilizers. In some years, frosts caused damping- off of sugar beet seedlings on a large scale in the Vojvodina Province. Poor sugar beet germination and emergence were frequently due to spring droughts. Sometimes they were due to strong winds. The occurrence of Fusarium root rot and charcoal root rot intensified on poor soils. Fusariosis symptoms were exhibited as plant wilting and different forms of root rot. In recent years root tip rot has occurred frequently in the first part of the growing season causing necrosis and dying of plants. Lateral roots tended to proliferate from the healthy tissue, giving the root a bearded appearance similar to Rhizomania. Fusarium oxysporum was the most frequent agent of this fusariosis. F. graminearum, F. equiseti, F. solani have also been

  12. Nuclear flow in a filamentous fungus

    CERN Document Server

    Hickey, Patrick C; Read, Nick; Glass, N Louise; Roper, Marcus

    2012-01-01

    The syncytial cells of a filamentous fungus consist of a mass of growing, tube-like hyphae. Each extending tip is fed by a continuous flow of nuclei from the colony interior, pushed by a gradient in turgor pressure. The myco-fluidic flows of nuclei are complex and multidirectional, like traffic in a city. We map out the flows in a strain of the model filamentous fungus {\\it N. crassa} that has been transformed so that nuclei express either hH1-dsRed (a red fluorescent nuclear protein) or hH1-GFP (a green-fluorescent protein) and report our results in a fluid dynamics video.

  13. Control of lettuce bottom rot by isolates of Trichoderma spp

    Directory of Open Access Journals (Sweden)

    Zayame Vegette Pinto

    2014-06-01

    Full Text Available Bottom rot, caused by Rhizoctonia solani AG 1-IB, is an important disease affecting lettuce in Brazil, where its biological control with Trichoderma was not developed yet. The present study was carried out with the aim of selecting Trichoderma isolates to be used in the control of lettuce bottom rot. Forty-six Trichoderma isolates, obtained with baits containing mycelia of the pathogen, were evaluated in experiments carried out in vitro and in vivo in a greenhouse in two steps. In the laboratory, the isolates were evaluated for their capabilities of parasitizing and producing toxic metabolic substances that could inhibit the pathogen mycelial growth. In the first step of the in vivo experiments, the number and the dry weight of lettuce seedlings of the cultivar White Boston were evaluated. In the second step, 12 isolates that were efficient in the first step and showed rapid growth and abundant sporulation in the laboratory were tested for their capability of controlling bottom rot in two repeated experiments, and had their species identified. The majority of the isolates of Trichoderma spp. (76% showed high capacity for parasitism and 50% of them produced toxic metabolites capable of inhibiting 60-100% of R. solani AG1-IB mycelial growth. Twenty-four isolates increased the number and 23 isolates increased the dry weight of lettuce seedlings inoculated with the pathogen in the first step of the in vivo experiments.In both experiments of the second step, two isolates of T. virens, IBLF 04 and IBLF 50, reduced the severity of bottom rot and increased the number and the dry weight of lettuce seedlings inoculated with R. solani AG1-IB. These isolates had shown a high capacity for parasitism and production of toxic metabolic substances, indicating that the in vitro and in vivo steps employed in the present study were efficient in selecting antagonists to be used for the control of lettuce bottom rot.

  14. Dentigerumycin: a bacterial mediator of an ant-fungus symbiosis

    DEFF Research Database (Denmark)

    Oh, Dong-Chan; Poulsen, Michael; Currie, Cameron R; Clardy, Jon

    2009-01-01

    Fungus-growing ants engage in mutualistic associations with both the fungus they cultivate for food and actinobacteria (Pseudonocardia spp.) that produce selective antibiotics to defend that fungus from specialized fungal parasites. We have analyzed one such system at the molecular level and found...... that the bacterium associated with the ant Apterostigma dentigerum produces dentigerumycin, a cyclic depsipeptide with highly modified amino acids, to selectively inhibit the associated parasitic fungus (Escovopsis sp.)....

  15. Improving xylitol production through recombinant expression of xylose reductase in the white-rot fungus Phanerochaete sordida YK-624.

    Science.gov (United States)

    Hirabayashi, Sho; Wang, Jianqiao; Kawagishi, Hirokazu; Hirai, Hirofumi

    2015-07-01

    We generated an expression construct consisting of the xylose reductase (XR) gene (xr) from Phanerochaete chrysosporium. Transformant X7 exhibited increased xylitol production and markedly higher XR activities than the wild-type strain. RT-PCR analysis demonstrated that the increased XR activity was associated with constant expression of the recombinant xr gene. PMID:25547244

  16. Changes in oxidative enzyme activity during interspecific mycelial interactions involving the white-rot fungus Trametes versicolor

    Czech Academy of Sciences Publication Activity Database

    Hiscox, J.; Baldrian, Petr; Rogers, H. J.; Boddy, L.

    2010-01-01

    Roč. 47, č. 6 (2010), s. 562-571. ISSN 1087-1845 Institutional research plan: CEZ:AV0Z50200510 Keywords : Interactions * Basidiomycetes * Trametes Subject RIV: EE - Microbiology, Virology Impact factor: 3.333, year: 2010

  17. Pyrolysis characteristics and kinetics of lignin derived from enzymatic hydrolysis residue of bamboo pretreated with white-rot fungus

    OpenAIRE

    Yan, Keliang; Liu, Fang; Chen, Qing; Ke, Ming; Huang, Xin; Hu, Weiyao; Zhou, Bo; Zhang, Xiaoyu; YU, HONGBO

    2016-01-01

    Background The lignocellulose biorefinery based on the sugar platform usually focuses on polysaccharide bioconversion, while lignin is only burned for energy recovery. Pyrolysis can provide a novel route for the efficient utilization of residual lignin obtained from the enzymatic hydrolysis of lignocellulose. The pyrolysis characteristics of residual lignin are usually significantly affected by the pretreatment process because of structural alteration of lignin during pretreatment. In recent ...

  18. Influence of glucose feeding on the ligninolytic enzyme production of the white-rot fungus Phanerochaete chrysosporium

    Institute of Scientific and Technical Information of China (English)

    ZHOU Xiaoyan; WEN Xianghua; FENG Yan

    2007-01-01

    The present work studied the influence of glucose feeding on the ligninolytic enzyme production of Phanerochaete chrysosporium in a nitrogen-limited(C/N ratio is 56/8.8 mmol/L)medium.Several sets of shaking flask experiments were conducted.The results showed that 2g/L glucose feeding on the first day of the culture(24 h after the inoculation)stimulated both fungal biomass growth and enzyme production.The manganese peroxidase(MnP)activity was 2.5 times greater than that produced in cultures without glucose feeding.Furthermore,the glucose feeding mode in fed-batch culture was also investigated.Compared to cultures with glucose feeding every 48 h,cultures with glucose feeding of 1.5 g/L(final concentration)every 24 h produced more enzymes.The peak and total yield of MnP activity were 2.7 and 3 times greater compared to the contrast culture,respectively,and the enzyme was kept stable for 4 days with an activity of over 200 U/L.

  19. Decolorization of molasses spent wash by the white-rot fungus Flavodon flavus, isolated from a marine habitat

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.; Rivonkar, G.

    %. Decolorizing activity was also present in media prepared with half-strength seawater (equivalent to 15 ppt salinity). Decolorizing activity was seen in low-nitrogen medium, nutrient-rich medium and in sugarcane bagasse medium. The percentage decolorization...

  20. Extracellular Enzymes of the White-Rot Fungus Fomes fomentarius and Purification of 1,4-beta-Glucosidase

    Czech Academy of Sciences Publication Activity Database

    Větrovský, Tomáš; Baldrian, Petr; Gabriel, Jiří

    2013-01-01

    Roč. 169, č. 1 (2013), s. 100-109. ISSN 0273-2289 R&D Projects: GA MŠk(CZ) LA10001; GA MŠk OC08050 Institutional support: RVO:61388971 Keywords : Cellulose * 1,4-beta-glucosidase * Glycosyl hydrolase Subject RIV: EE - Microbiology, Virology Impact factor: 1.687, year: 2013

  1. Distribution of metals and enzyme activities within wood and fruit bodies of white-rot fungus fomes fomentarius

    Czech Academy of Sciences Publication Activity Database

    Gabriel, Jiří; Baldrian, Petr; Merhautová, Věra; Kofroňová, Olga; Žižka, Zdeněk; Proška, J.; Král, J.

    Durban, 2004, s. 146-147. [International Conference on Biotechnology in the Pulp and Paper Industry /9./. Durban (ZA), 10.10.2004-14.10.2004] R&D Projects: GA ČR GA522/03/0187 Keywords : aas * wood-inhabiting fungi Subject RIV: EE - Microbiology, Virology

  2. Enhanced lignin biodegradation by a laccase-overexpressed white-rot fungus Polyporus brumalis in the pretreatment of wood chips.

    Science.gov (United States)

    Ryu, Sun-Hwa; Cho, Myung-Kil; Kim, Myungkil; Jung, Sang-Min; Seo, Jin-Ho

    2013-11-01

    The laccase gene of Polyporus brumalis was genetically transformed to overexpress its laccase. The transformants exhibited increased laccase activity and effective decolorization of the dye Remazol Brilliant Blue R than the wild type. When the transformants were pretreated with wood chips from a red pine (softwood) and a tulip tree (hardwood) for 15 and 45 days, they showed higher lignin-degradation activity as well as higher wood-chip weight loss than the wild type. When the wood chips treated with the transformant were enzymatically saccharified, the highest sugar yields were found to be 32.5 % for the red pine wood and 29.5 % for the tulip tree wood, on the basis of the dried wood weights, which were 1.6-folds higher than those for the wild type. These results suggested that overexpression of the laccase gene from P. brumalis significantly contributed to the pretreatment of lignocellulose for increasing sugar yields. PMID:23975277

  3. Open-Ended Experimentation with the Fungus Pilobolus.

    Science.gov (United States)

    Coble, Charles R.; Bland, Charles E.

    This paper describes open-ended experimentation with the fungus Pilobolus for laboratory work by high school students. The fungus structure and reproduction is described and sources of the fungus are suggested. Four areas for investigation are suggested: the effect of a diffuse light source, the effect of a point light source, the effect of light…

  4. Characterization of the BLR1 gene encoding a putative blue-light regulator in the phytopathogenic fungus Bipolaris oryzae.

    Science.gov (United States)

    Kihara, Junichi; Moriwaki, Akihiro; Tanaka, Nozomi; Ueno, Makoto; Arase, Sakae

    2007-01-01

    Bipolaris oryzae is a filamentous ascomycetous fungus that causes brown leaf spot disease in rice. We isolated and characterized BLR1, a gene that encodes a putative blue-light regulator similar to Neurospora crassa white-collar 1 (WC-1). The deduced amino acid sequence of BLR1 showed high degrees of similarity to other fungal blue-light regulator protein. Disruption of the BLR1 gene demonstrated that this gene is essential for conidial development after conidiophore formation and for near-UV radiation-enhanced photolyase gene expression. PMID:17233721

  5. Leptin receptor overlapping transcript (LepROT) gene participates in insulin pathway through FoxO.

    Science.gov (United States)

    Wang, Chuan-Xu; Zhao, Ai-Hua

    2016-08-01

    Leptin receptor overlapping transcript (LepROT) is co-transcribed with the leptin receptor (LepR). However, the function and mechanism of LepROT in insulin pathway is unclear. In this study, we report the function of LepROT in maintaining consistent FoxO transcription. LepROT is constitutively expressed during larval development. 20-Hydroxyecdysone, methoprene, and insulin have no effect on the transcription of LepROT. However, the knockdown of LepROT by dsRNA injection in larvae causes delay of the development of Helicoverpa armigera. Knockdown of LepROT results in the upregulation of FoxO and downregulation of PI3K. The knockdown of LepROT also results in the subcellular translocation of FoxO from cytoplasm to nuclei. By contrast, overexpression of LepROT in the HaEpi cell line inhibits FoxO expression. Results suggest that LepROT participates in insulin signaling. PMID:27106118

  6. IDENTIFICATION OF THREE FRUIT-ROT FUNGI OF BANANA BY 28S RIBOSOMAL DNA SEQUENCING

    Directory of Open Access Journals (Sweden)

    Supriya Sarkar*, S Girisham and SM Reddy

    2013-01-01

    Full Text Available The aim of present investigation was to identify three fruit-rot fungi-Macrophomina phaseolina (Tassi Goid, Fusarium oxysporum (Schlechtend and Nigrospora oryzae (Berk and Br. Petch isolated from banana fruits [Rasthali (Silk AAB and Cavendish (AAA varieties]. Out of different fungal genera isolated, the above fungi were responsible for maximum loss of banana fruits as they spread rapidly into the fruit pulp and deteriorated the fruits. The amplification studies of fragment of D2 region of LSU (Large subunit 28S rDNA gene of three fungi understudy was carried out using PCR technique. Based on the nucleotide homology and phylogenetic analysis, the fungus M. phaseolina was identified as M. phaseolina strain R-4242 sp. (Genbank accession number: FJ415068.1, F. oxysporum as Fusarium sp.QJC-1403 5.8S ribosomal RNA gene sp. (Genbank accession number: EU193176.1 and N. oryzae as N. oryzae NRRL: 54030 sp. (Genbank accession number: GQ328855.1. Nucleic acid sequencing provides more objective separation of genera and species than that provided by the conventional techniques. This technique can best be used for the identification of organisms that could not be identified satisfactorily by their microscopic morphological features. Genetic characterization of plant pathogens prevalent in an area is necessary for efficient management and increased crop productivity. The data presented may help researchers to understand the host-pathogen interactions indetail in banana, to design effective strategies for deployment of resistant genes in banana (Musa paradisiaca L. growing regions in the country and worldwide.

  7. Live-trapping and handling brown bear

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This paper reports techniques developed to live trap and handle brown bears on the Kodiak National Wildlife Refuge. The brown bears (Ursus middendorffi) on the...

  8. Browns Park NWR Water Use Report- 1999

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report contains locations and water use at Browns Park NWR for 1999. A basic introduction highlighting the region that Browns Park NWR is a part of and the...

  9. Browns Park NWR Water Use Report- 2000

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report contains locations and water use at Browns Park NWR for 2000. A basic introduction highlighting the region that Browns Park NWR is a part of and the...

  10. Death from Fungus in the Soil

    Centers for Disease Control (CDC) Podcasts

    2012-12-17

    Dr. Shira Shafir, Assistant Professor of Epidemiology at the UCLA Fielding School of Public Health, discusses her study about fungus found in soil.  Created: 12/17/2012 by National Center for Emerging and Zoonotic Infectious Diseases (NCEZID).   Date Released: 12/18/2012.

  11. Spread of Rare Fungus from Vancouver Island

    Centers for Disease Control (CDC) Podcasts

    2006-12-20

    Cryptococcus gattii, a rare fungus normally found in the tropics, has infected people and animals on Vancouver Island, Canada. Dr. David Warnock, Director, Division of Foodborne, Bacterial, and Mycotic Diseases, CDC, discusses public health concerns about further spread of this organism.  Created: 12/20/2006 by Emerging Infectious Diseases.   Date Released: 12/29/2006.

  12. Control of Postharvest Fusarium Rot and Trichothecium Rot in Harvested Muskmelon (cv. Yindi) by Harpin

    Institute of Scientific and Technical Information of China (English)

    GE Yong-hong; BI Yang; LI Mei; LI Xuan

    2005-01-01

    Preharvest and postharvest application of Harpin was evaluated for its ability to induce resistance in muskmelon fruit and control rots. Preharvest treatments were 30 mg L-1, 60 mg L-1 Harpin or 1 mg L-1 Imazalil either 1 week or 1 day before harvest.The CK was untreated. Fruit were then inoculated with Fusarium semitectum or Trichothecium roseum 48 h after harvest,and stored at 23 ± 1℃, RH (relative humidity) 50-60% for 4 d. All treatments were effective in reducing the lesion area with 60 mg L-1 Harpin the most effectively. No treatments inhibited infection rate. Postharvest treatment was fruit dips of 30 mg L-1, 60 mg L-1 Harpin, 0.1 mg L-1 Imazalil. Fruit were inoculated with F. semitectum or T. roseum 24, 72, 120 or 168 h after treatment, and stored at 23 ± 1 ℃, RH 50-60% for 4 days. All treatments were effective in reducing the lesion area with 60 mg L-1 Harpin the most effectively. No treatments inhibited the infection rate. Postharvest Harpin treatment induced the peroxidase activity increase, peroxidase activity reached maximum after 8 d and the activation lasted at least 10 d.

  13. 21 CFR 184.1120 - Brown algae.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Brown algae. 184.1120 Section 184.1120 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN... Substances Affirmed as GRAS § 184.1120 Brown algae. (a) Brown algae are seaweeds of the species...

  14. Pengaruh Penambahan Jamur Pelapuk Putih (White Rot Fungi pada Proses Pengomposan Tandan Kosong Kelapa Sawit

    Directory of Open Access Journals (Sweden)

    Nasrul Nasrul

    2010-12-01

    Full Text Available Composting is nowadays a general treatment method for agriculture waste such as empty fruit bunch. This research article reported the composting process of the empty fruit bunches. The effect of addition of white rot fungi (Phanerochaete Chrysosporium as an activator on composting product was studied. Experiment results indicated that white rot fungi is a good activator to improve degradation process of the empty fruit bunch become an organic fertilizer. White rot fungi has capable to increase composting period become shorter in compare with original composting without addition of white rot fungi. The organic fertilizer product as regulation issued by the Standar Nasional Indonesia (NSI can be achieved in duration of 3 months, while for original process without addition of white rot fungi longer degradation time is necessary. Keyword: Composting, empty fruit bunch, white rot fungi

  15. Incidência de podridões do colmo, grãos ardidos e rendimento de grãos em híbridos de milho submetidos ao aumento na densidade de plantas Incidence of stalk rot, rot grains and grain yield of maize hybrids submitted to the increase in plant density

    Directory of Open Access Journals (Sweden)

    Ricardo Trezzi Casa

    2007-12-01

    contrasting tolerance to crowding. The experiment was carried out in Lages-SC, during the crop seasons of 2002/03 and 2003/04, in an area of no-tillage and monoculture, having a mixture of black oat and vetch as the preceding winter crop. The experimental design was a randomized block with split plot arrangement and three replications per treatment. Two hybrids were evaluated in the main plots: Speed (a single-cross hybrid tolerant to crowding and AG 303 (a double-cross hybrid intolerant to crowding. Each hybrid was submitted to five plant densities in the split-plots: 25, 50, 75, 100 and 125 thousand plants per ha. The increase in plant density enhanced linearly the occurrence of stalk rot and rot grains for both hybrids and crop seasons. The fungus Colletotrichum graminicola was detected with great frequency in the stalk rot, regardless of hybrid and crop season, followed by Fusarium graminearum, F. verticillioides and Stenocarpella sp. The predominant fungi in rot grains were F. verticillioides, F. graminearum and Penicillium spp. The grain yield of AG 303 was less responsive to the increment in plant density. No association between the higher grain yield of the single-cross hybrid Speed at dense stands and the lower incidence of stalk rot and rot grains was detected.

  16. Copper complexes grafted to amino-functionalized silica gel as wood preservatives against fungal decay: Mini-blocks and standard test

    Directory of Open Access Journals (Sweden)

    Sabrina Palanti

    2012-11-01

    Full Text Available Previous preliminary studies showed good efficacy of treatments based on a mixture of siloxane materials, functionalized with amino groups and coupled with copper, against the brown rot fungus Coniophora puteana (Palanti et al. 2011. In the present work, a one-step impregnation was performed on two sets of samples differing in size, in order to verify and compare the homogeneity of treatments. Leaching and resistance against brown rot and white rot fungi were also tested according to European standards EN 84 and EN 113, respectively. Furthermore, an accelerated test of efficacy against fungal decay was also used for determining the treatment efficacy. The obtained results made it possible to validate the findings of the preliminary study concerning resistance of the treated wood against C. puteana, while extending them to the white rot fungus Trametes versicolor. In contrast, no protection was conferred by the treatment against the copper-tolerant fungus Poria placenta.

  17. Fusarium rot of onion and possible use of bioproduct

    Directory of Open Access Journals (Sweden)

    Klokočar-Šmit Zlata

    2008-01-01

    Full Text Available Several species of Fusarium are causal agents of onion rot in field and storage. Most prevalent are F. oxysporum f. sp. cepae and F. solani, and recently F. proliferatum, a toxigenic species. Most frequently isolated fungi in our field experiments were F. solani and F. proliferatum with different pathogenicity. Certain differences in antagonistic activity of Trichoderma asperellum on different isolates of F. proliferatum and F. solani have been found in in vitro study in dual culture, expressed as a slower inhibition of growth of the former, and faster of the latter pathogen. Antagonistic abilities of species from genus Trichoderma (T. asperellum are important, and have already been exploited in formulated biocontrol products in organic and conventional production, in order to prevent soil borne pathogens inducing fusarium wilt and rot. The importance of preventing onion infection by Fusarium spp., possible mycotoxin producers, has been underlined.

  18. The presence and survival of soft rot (Erwinia) in flower bulb production systems

    OpenAIRE

    Doorn, van, MGLM; Vreeburg, P.J.M.; van, Leeuwen, M.; Dees, R.H.L.

    2011-01-01

    Soft rot is causing increasing damage in the flower bulb industry. Bulbous ornamentals such as Hyacinthus, Dahlia, Iris, Muscari, Freesia and Zantedeschia can be infected. Soft rot in flower bulbs is mainly caused by Dickeya spp. (Dickeya spp.) and Erwinia carotovora subsp. carotovora (Pectobacterium carotovorum spp. carotovorum).To identify and detect these soft rot bacterial species in several bulbous ornamentals, standard PCR methods were used. During the last four years, research was dire...

  19. Rot detection of wood poles by means of a portable x-ray computed tomographic scanner

    International Nuclear Information System (INIS)

    A portable X-ray computed tomographic (CT) scanner has been applied to rot detection of wood poles for electric power distribution. CT reconstructions clearly drew a rotted part and they well agreed with crosssections of wood poles which were actually cut off after the measurement. The result shows that the CT scanner offers a very useful means for rot detection of utility poles, building columns, statues, etc. (author)

  20. The Effect of Temperature and Relative Humidity on Pawpaw Fruit Rot in South-Western Nigeria

    OpenAIRE

    R.A. Baiyewu; N.A. Amusa

    2005-01-01

    Fungi found associated with fruit rot of pawpaw (Carica papaya L. ) in South-western Nigeria includes Rhizopus nigricans, Aspergilus niger, Fusarium moniliforme, Curvularia lunata and Collectotrichum capsicis. All were pathogenic on the test pawpaw fruits varieties (Isolo, JS22 and Homestead) in this study. The most pathogenic being C. lunata followed by R. nigricans, while the least rot was induced by C. capsicis. Results reveal that optimum temperature for maximum rot, range f...

  1. Involvement of phenolic compounds in the susceptibility of bananas to crown rot. A review.

    OpenAIRE

    Lassois, L.; de Lapeyre de Bellaire, L; Ewané, CA.; Lepoivre, P

    2012-01-01

    Crown rot of bananas, caused by a fungal parasitic complex, is one of the main quality defects of exported bananas. Major variations in the susceptibility of bananas to crown rot have been observed in different production zones. The physiological state of the banana fruit at harvest is said to influence its response to pathogenic attack and thus to modulate its susceptibility to crown rot. The susceptibility of bananas to this disease, however, appears to be influenced by many pre-harvest fac...

  2. Pengaruh Penambahan Jamur Pelapuk Putih (White Rot Fungi) pada Proses Pengomposan Tandan Kosong Kelapa Sawit

    OpenAIRE

    Nasrul Nasrul; Teuku Maimun

    2010-01-01

    Composting is nowadays a general treatment method for agriculture waste such as empty fruit bunch. This research article reported the composting process of the empty fruit bunches. The effect of addition of white rot fungi (Phanerochaete Chrysosporium) as an activator on composting product was studied. Experiment results indicated that white rot fungi is a good activator to improve degradation process of the empty fruit bunch become an organic fertilizer. White rot fungi has capable to increa...

  3. Pathogenicity of and plant immunity to soft rot pectobacteria

    OpenAIRE

    Davidsson, Pär R.; Kariola, Tarja; Niemi, Outi; Palva, E. T.

    2013-01-01

    Soft rot pectobacteria are broad host range enterobacterial pathogens that cause disease on a variety of plant species including the major crop potato. Pectobacteria are aggressive necrotrophs that harbor a large arsenal of plant cell wall-degrading enzymes as their primary virulence determinants. These enzymes together with additional virulence factors are employed to macerate the host tissue and promote host cell death to provide nutrients for the pathogens. In contrast to (hemi)biotrophs s...

  4. Botanicals to Control Soft Rot Bacteria of Potato

    OpenAIRE

    Rahman, M.M.; Khan, A. A.; M. E. Ali; Mian, I. H.; Akanda, A. M.; Abd Hamid, S. B.

    2012-01-01

    Extracts from eleven different plant species such as jute (Corchorus capsularis L.), cheerota (Swertia chiraita Ham.), chatim (Alstonia scholaris L.), mander (Erythrina variegata), bael (Aegle marmelos L.), marigold (Tagetes erecta), onion (Allium cepa), garlic (Allium sativum L.), neem (Azadiracta indica), lime (Citrus aurantifolia), and turmeric (Curcuma longa L.) were tested for antibacterial activity against potato soft rot bacteria, E. carotovora subsp. carotovora (Ecc) P-138, under in v...

  5. Soft Rot of Tomato Caused by Mucor racemosus in Korea

    OpenAIRE

    Kwon, Jin-Hyeuk; Hong, Seung-Beom

    2005-01-01

    A soft rot of fruits caused by Mucor racemosus occurred on cherry tomato collected in Agricultural Products Wholesale Market in Jinju, Korea. The disease infection usually occurred wounded areas after cracking of fruits. At first, the lesions started with water soaked and rapidly softened and diseased lesion gradually expanded. Colonies were white to brownish to gray in color. Sporangia were 32~54 µm in size and globose in shape. Sporangiophores were 8~14 µm in width. Sporangiospores were 5~1...

  6. Enzyme activity in banana fruits rotted by Botryodiplodia theobromae Pat.

    OpenAIRE

    Nityananda Chakraborty; Balen Nandi

    2015-01-01

    Peroxidase and polyphenol oxidase activities in fruits of two cultivars of banana, 'champa' and 'kanthali' rotted by Botryodiplodia theobromae Pat. was studied. The enzymes showed much higher activities in infected than that in uninfected 'tissues. Increase in peroxidase activity was evidently inhibited by cycloheximide. Polyphenol oxidase activity was also inhibited in presence of phenylthiourea and Na-diethyldithiocarbamate more strongly by the former. Increase in activities seemed to be du...

  7. Resistance to black rot in a Spanish Brassica collection.

    OpenAIRE

    Lema Márquez, Margarita; Soengas Fernández, María del Pilar; Velasco Pazos, Pablo; Abilleira Ambroa, Rosaura; Cartea González, María Elena

    2011-01-01

    Xanthomonas campestris pv. campestris (Xcc), causal agent of black rot, is widely distributed around the world in Brassica crops causing severe yield losses. The seedborne bacteria can survive in crop debris or crucifer weeds, introducing in the plant through hydathodes and wounds. While in warm and humid regions Xcc can cause plant dead, in coastal temperate areas it produces necrotic lesions on leaf margin, which decrease the value of the product on fresh market. In northwestern Spain, blac...

  8. Fusarium rot of onion and possible use of bioproduct

    OpenAIRE

    Klokočar-Šmit Zlata; Lević Jelena; Maširević Stevan; Grozdanović-Varga Jelica; Vasić Mirjana; Aleksić Svjetlana

    2008-01-01

    Several species of Fusarium are causal agents of onion rot in field and storage. Most prevalent are F. oxysporum f. sp. cepae and F. solani, and recently F. proliferatum, a toxigenic species. Most frequently isolated fungi in our field experiments were F. solani and F. proliferatum with different pathogenicity. Certain differences in antagonistic activity of Trichoderma asperellum on different isolates of F. proliferatum and F. solani have been found in in vitro study in dual culture, express...

  9. Korrektur von Rot- bzw. Grünanomalie mittels Farbfilter

    OpenAIRE

    Junger, Barbara

    2009-01-01

    Zielsetzung Farbensehen ist ein physiologisches Vermögen basierend unter anderem auf Pigmentgenen, erzeugten Photopigmenten und deren Absorptionsspektren. Im Falle von Störungen des Rot- und Grüngenes resultiert fehlerhaftes Farbensehen im Sinne von anomaler Trichromasie, Dichromasie oder Blauzapfenmonochromasie. Zur Therapie der anomalen Trichromasie wurden korrigierende Farbfilter (Coloryte) mit Spezialbeschichtung entwickelt, deren Einfluss auf das Farbensehen Gegenstand dieser Studie w...

  10. Trichoderma spp. decrease Fusarium root rot in common bean

    Directory of Open Access Journals (Sweden)

    Hudson Teixeira

    2012-12-01

    Full Text Available The effectiveness of six Trichoderma-based commercial products (TCP in controlling Fusarium root rot (FRR in common bean was assessed under field conditions. Three TCP, used for seed treatment or applied in the furrow, increased seedling emergence as much as the fungicide fludioxonil. FRR incidence was not affected, but all TCP and fludioxonil reduced the disease severity, compared to control. Application of Trichoderma-based products was as effective as that of fludioxonil in FRR management.

  11. Environmental Factors and Bioremediation of Xenobiotics Using White Rot Fungi

    OpenAIRE

    Magan, Naresh; Fragoeiro, Silvia; Bastos, Catarina

    2010-01-01

    This review provides background information on the importance of bioremediation approaches. It describes the roles of fungi, specifically white rot fungi, and their extracellular enzymes, laccases, ligninases, and peroxidises, in the degradation of xenobiotic compounds such as single and mixtures of pesticides. We discuss the importance of abiotic factors such as water potential, temperature, and pH stress when considering an environmental screening approach, and examples are provided of the ...

  12. Stabilization of lignin peroxidases in white rot fungi by tryptophan.

    OpenAIRE

    Collins, P. J.; Field, J. A.; Teunissen, P; Dobson, A D

    1997-01-01

    Supplementation of various cultures of white rot fungi with tryptophan was found to have a large stimulatory effect on lignin peroxidase activity levels. This enhancement was greater than that observed in the presence of the lignin peroxidase recycling agent veratryl alcohol. Using reverse transcription-PCR, we found that tryptophan does not act to induce lignin peroxidase expression at the level of gene transcription. Instead, the activity enhancement observed is likely to result from the pr...

  13. Efficacy of plant essential oils on postharvest control of rots caused by fungi on different stone fruits in vivo.

    Science.gov (United States)

    Lopez-Reyes, Jorge Giovanny; Spadaro, Davide; Prelle, Ambra; Garibaldi, Angelo; Gullino, Maria Lodovica

    2013-04-01

    The antifungal activity of plant essential oils was evaluated as postharvest treatment on stone fruit against brown rot and grey mold rot of stone fruit caused by Monilinia laxa and Botrytis cinerea, respectively. The essential oils from basil (Ocimum basilicum), fennel (Foeniculum sativum), lavender (Lavandula officinalis), marjoram (Origanum majorana), oregano (Origanum vulgare), peppermint (Mentha piperita), rosemary (Rosmarinus officinalis), sage (Salvia officinalis), savory (Satureja montana), thyme (Thymus vulgaris), and wild mint (Mentha arvensis) were tested at two different concentrations on apricots (cv. Kyoto and cv. Tonda di Costigliole), nectarines (cv. Big Top and cv. Nectaross) and plums (cv. Italia and cv. TC Sun). The volatile composition of the essential oils tested was determined by gas chromatography-mass spectrometry analysis. The treatments containing essential oils from oregano, savory, and thyme at 1% (vol/vol) controlled both B. cinerea and M. laxa growing on apricots cv. Tonda di Costigliole and plums cv. Italia and cv. TC Sun; however, the same treatments were phytotoxic for the carposphere of nectarines cv. Big Top and cv. Nectaross. Treatments with 10% (vol/vol) essential oils were highly phytotoxic, notwithstanding their efficacy against the pathogens tested. The essential oils containing as major components α-pinene, p-cymene, carvacrol, and thymol showed similar results on stone fruit, so their antimicrobial activity and the phytotoxicity produced could be based on the concentration of their principal compounds and their synergistic activity. The efficacy of the essential oil treatments on control of fungal pathogens in postharvest depended on the fruit cultivar, the composition and concentration of the essential oil applied, and the length of storage. PMID:23575125

  14. RNA-mediated gene silencing in the phytopathogenic fungus Bipolaris oryzae.

    Science.gov (United States)

    Moriwaki, Akihiro; Ueno, Makoto; Arase, Sakae; Kihara, Junichi

    2007-04-01

    The Ascomycetous fungus Bipolaris oryzae is the causal agent of brown leaf spot disease in rice and is a model for studying photomorphogenetic responses by near-UV radiation. Targeted gene disruption (knockout) for functional analysis of photomorphogenesis-related genes in B. oryzae can be achieved by homologous recombination with low efficiency. Here, the applicability of RNA silencing (knockdown) as a tool for targeting endogenous genes in B. oryzae is reported. A polyketide synthase gene (PKS1), involved in fungal DHN melanin biosynthesis pathways, was targeted by gene silencing as a marker. The silencing vector encoding hairpin RNA of the PKS1 fragment was constructed in a two-step PCR-based cloning, and introduced into the B. oryzae genomic DNA. Silencing of the PKS1 gene resulted in albino phenotypes and reduction of PKS1 mRNA expression. These results demonstrate the applicability of targeted gene silencing as a useful reverse-genetics approach in B. oryzae. PMID:17227462

  15. ISOLATION AND IDENTIFICATION OF BACTERIAL CAUSING SOFT ROT DESEASE ON STRAWBERRY FRUIT (Fragaria x ananassa)

    OpenAIRE

    Made Mega Yuliasari; Retno Kawuri; Meitini Wahyuni Proborini

    2015-01-01

    Soft rot on strawberry fruit was found in strawberry (F. x ananassa) plantation in Candi Kuning, Bedugul, Bali. Soft rot on strawberry fruit can be caused by microorganism i.e. bacteria. Objectives of the research were to isolate pathogen causing soft rot on strawberry fruit with plating method and to identify bacteria causing soft rot by using Kit MicrogenTM GNA+B-ID System and Bergey’s Manual of Determinative Bacteriology reference (Holt et al., 1994). Results showed there were five isolate...

  16. Novel nuances of human brown fat

    DEFF Research Database (Denmark)

    Scheele, Camilla; Larsen, Therese Juhlin; Nielsen, Søren

    2014-01-01

    There is a current debate in the literature on whether human fat derived from the supraclavicular region should be classified as brown, or as the white fat-derived less potent, brite/beige. This commentary addresses whether the existing classification defined in mice is sufficient to describe the...... types of thermogenic adipocytes in humans. We recently published a contradictory mRNA expression signature of human supraclavicular fat defined by an upregulation of the brite marker TBX1 along with the classical brown markers ZIC1 and LHX8, as well as genes indicating brown fat activity including UCP1......, there was no difference in UCP1, PGC-1α, PRDM16, suggesting both depots had equal brown fat potency. Taken together, supraclavicular brown fat derived from adult humans seems to represent a type of brown fat with distinct features from both subcutaneous white/brite and interscapular brown fat. Therefore...

  17. Relationship of Soilborne Mycoflora of Cassava Growing Fields to Incidence of Postharvest Rots of Cassava Tubers in Sokoto, Nigeria

    Directory of Open Access Journals (Sweden)

    Maccido Ibrahim

    2014-11-01

    Full Text Available In this study the fungi associated with cassava growing fields in Sokoto were isolated and identified using soil dilution technique. A total of 215 fungal colonies from 9 fungal species were isolated from soil samples of different cassava fields between the month of June and August, 2012. It was observed that soil samples from Lambara recorded the highest number (64 of fungal species followed by Damba and the least number (44 of fungal species was observed in Wamakko.The fungi isolated were Alternaria species, Aspergillus niger, Aspergillus fumigatus, Cylindrocarpon lichenicola, Fusarium oxysporum, Geotrichum candidum, Mucor hiemalis, Rhizopus orgyzae and Scopulariopsis candida.The highest percentage frequency of occurrence was observed in Aspergillus niger (39.5% seconded by Fusarium oxysporum (18.2% and the least was seen in Rhizopus oryzae ( 2.3%. The pathogenicity test indicated that all the fungal isolates were pathogenic on cassava tubers.The fungus M. hiemalis is the most pathogenic followed by F. oxysporum and the least was recorded by R. oryzae. Therefore, it would be concluded that there is relationship between soilborne fungi and incidence of postharvest rots of cassava tubers.

  18. Genome-wide association analysis and differential expression analysis of resistance to Sclerotinia stem rot in Brassica napus.

    Science.gov (United States)

    Wei, Lijuan; Jian, Hongju; Lu, Kun; Filardo, Fiona; Yin, Nengwen; Liu, Liezhao; Qu, Cunmin; Li, Wei; Du, Hai; Li, Jiana

    2016-06-01

    Brassica napus is one of the most important oil crops in the world, and stem rot caused by the fungus Sclerotinia sclerotiorum results in major losses in yield and quality. To elucidate resistance genes and pathogenesis-related genes, genome-wide association analysis of 347 accessions was performed using the Illumina 60K Brassica SNP (single nucleotide polymorphism) array. In addition, the detached stem inoculation assay was used to select five highly resistant (R) and susceptible (S) B. napus lines, 48 h postinoculation with S. sclerotiorum for transcriptome sequencing. We identified 17 significant associations for stem resistance on chromosomes A8 and C6, five of which were on A8 and 12 on C6. The SNPs identified on A8 were located in a 409-kb haplotype block, and those on C6 were consistent with previous QTL mapping efforts. Transcriptome analysis suggested that S. sclerotiorum infection activates the immune system, sulphur metabolism, especially glutathione (GSH) and glucosinolates in both R and S genotypes. Genes found to be specific to the R genotype related to the jasmonic acid pathway, lignin biosynthesis, defence response, signal transduction and encoding transcription factors. Twenty-four genes were identified in both the SNP-trait association and transcriptome sequencing analyses, including a tau class glutathione S-transferase (GSTU) gene cluster. This study provides useful insight into the molecular mechanisms underlying the plant's response to S. sclerotiorum. PMID:26563848

  19. Control of Black Rot Disease in Tomato Fruits by Using Formulated Ginger Essential oil Treated by Gamma Radiation

    International Nuclear Information System (INIS)

    Ginger essential oil (Zingiber officinale) treated by gamma radiation at dose of 10 kGy was selected as an active ingredient for formulation of the biocide. Liquid formulations (emulsifiable concentrates) were prepared using different emulsifiers (Emulgator B.L.M. and tween 80 or tween 20) and additive oil (soybean oil). Physicochemical properties of the formulated oil (spontaneous emulsification, emulsion stability; cold stability and heat stability, viscosity, surface tension and ph) were measured. The formulated oil was tested in vivo to investigate its efficiency for controlling the growth of Alternaria alternata inoculated into tomato fruits. The results indicated that soaking inoculated tomato fruits in the formulated oil (ginger essential oil + soybean oil + emulgator B.L.M. + tween 80) treatment at concentration of 300 ppm for a period of 12 minute was the most effective for controlling the growth of the tested fungus. In addition, the formulated oil had efficiency for controlling the rot development on tomato fruits when applied as therapeutic and protective agents

  20. Biofumigation on Post-Harvest Diseases of Fruits Using a New Volatile-Producing Fungus of Ceratocystis fimbriata.

    Directory of Open Access Journals (Sweden)

    Qian Li

    Full Text Available A variety of volatile organic compounds (VOCs produced by Ceratocystis fimbriata have strong bioactivity against a wide range of fungi, bacteria and oomycetes. Mycelial growth, conidial production, and spore germination of fungi and oomycetes were significantly inhibited after exposure to cultures of C. fimbriata, and colony formation of bacteria was also inhibited. Two post-harvest diseases, peach brown rot caused by Monilinia fructicola and citrus green mold caused by Penicillium digitatum, were controlled during a 4-day storage by enclosing wound-inoculated fruits with 10 standard diameter Petri plate cultures of C. fimbriata in a 15 L box. The fruits were freshly inoculated at onset of storage and the cultures of C. fimbriata were 6 days old. Percentage of control was 92 and 97%, respectively. After exposure to C. fimbriata VOCs, severely misshapen hyphae and conidia of these two post-harvest pathogens were observed by scanning electron microscopy, and their pathogenicity was lost or greatly reduced.

  1. Biofumigation on Post-Harvest Diseases of Fruits Using a New Volatile-Producing Fungus of Ceratocystis fimbriata.

    Science.gov (United States)

    Li, Qian; Wu, Lei; Hao, Jianjun; Luo, Laixin; Cao, Yongsong; Li, Jianqiang

    2015-01-01

    A variety of volatile organic compounds (VOCs) produced by Ceratocystis fimbriata have strong bioactivity against a wide range of fungi, bacteria and oomycetes. Mycelial growth, conidial production, and spore germination of fungi and oomycetes were significantly inhibited after exposure to cultures of C. fimbriata, and colony formation of bacteria was also inhibited. Two post-harvest diseases, peach brown rot caused by Monilinia fructicola and citrus green mold caused by Penicillium digitatum, were controlled during a 4-day storage by enclosing wound-inoculated fruits with 10 standard diameter Petri plate cultures of C. fimbriata in a 15 L box. The fruits were freshly inoculated at onset of storage and the cultures of C. fimbriata were 6 days old. Percentage of control was 92 and 97%, respectively. After exposure to C. fimbriata VOCs, severely misshapen hyphae and conidia of these two post-harvest pathogens were observed by scanning electron microscopy, and their pathogenicity was lost or greatly reduced. PMID:26147922

  2. Biosorption of heavy metals using a dead macro fungus schizophyllum commune fries: evaluation of equilibrium and kinetic models

    International Nuclear Information System (INIS)

    Biomass of a wood rotting fungus viz., Schizophyllum commune Fries was utilized for the treatment of electroplating wastewater that contained Cu(II), Ni(II), Zn(II) and Cr(VI) ions. Preliminary batch assays were conducted with synthetic pure metal-bearing solutions. Results obtained showed that among various parameters studied, solution pH between a range of 2.0-6.0 induced negligible uptake at pH < 3.5 and exhibited maximum at around 4.5-5.5 for Ni(II), Cu(II) and Zn(II) ions, while for Cr(VI) ion the highest was evidenced at pH 2.0-2.5. The kinetics of all metal ions was fast and biosorption equilibrium was established in 1 hour with appropriateness of pseudo-second-order. A temperature change in the range of 15 - 45 deg. C did not affect the biosorption capacity of the candidate fungus. The biosorption of metal ion increased on elevating initial metal ions concentrations (20-100 mg L/sup -1/) in the medium. The maximum biosorption capacity of fungus biomass was 9.0, 21.27, 4.83, 18.54 mg g/sup -1/ for Ni(II), Cu(II) and Zn(II) and Cr(VI), respectively. The experimental data was best adjusted by Langmuir, Freundlich and modified Langmuir models. Biosorption assays conducted with actual electroplating effluents under pre-optimized conditions revealed efficiency of 72.01, 53.16, 7.08 and 19.87% for Cu(II), Ni(II), Zn(II) and Cr(VI) ions, respectively by candidate biomass. (author)

  3. [Report on a fungus parasitizing Entamoeba histolytica].

    Science.gov (United States)

    Cao, C Q; Feng, Y S

    1989-01-01

    Infection of Entamoeba histolytica with chytridiaceous fungus Sphaerita was observed in some specimens obtained from a farmer and stained with iron-haematoxylin. The fungi were found in 78% of the cysts, mostly immature ones. Within the amoebae this parasite occurred singly, in groups, or in the form of a sporangium. It was located in the cytoplasm, the glycogen mass or the chromatoidal bars. In the same specimen, the parasitic fungus was also found in 18% of E. coli cysts; in 11% of E. nana cysts; while only one of 16 E. hartmanni cysts was parasitized. It is an interesting case of superimposed parasitism so far reported in China as well as a rare case of several species of amoebae being heavily involved with the same in the scientific literature. PMID:2548767

  4. Pestalone, a new antibiotic produced by a marine fungus in response to bacterial challenge.

    Science.gov (United States)

    Cueto, M; Jensen, P R; Kauffman, C; Fenical, W; Lobkovsky, E; Clardy, J

    2001-11-01

    The isolation and structure determination of a new chlorinated benzophenone antibiotic, pestalone (1), is described. The new compound was produced by a cultured marine fungus only when a unicellular marine bacterium, strain CNJ-328, was co-cultured in the fungal fermentation. The fungus, isolated from the surface of the brown alga Rosenvingea sp. collected in the Bahamas Islands, was identified as an undescribed member of the genus Pestalotia. The structure of 1, initially assigned with only modest confidence by combined spectral and chemical data, was confirmed by single-crystal X-ray analysis. Pestalone (1) exhibits moderate in vitro cytotoxicity in the National Cancer Institute's 60 human tumor cell line screen (mean GI(50) = 6.0 microM). More importantly, pestalone shows potent antibiotic activity against methicillin-resistant Staphylococcus aureus (MIC = 37 ng/mL) and vancomycin-resistant Enterococcus faecium (MIC = 78 ng/mL), indicating that pestalone should be evaluated in advanced models of infectious disease. PMID:11720529

  5. SYSTEMIC INFECTION AND RELATED FUNGUS: AN OVERVIEW

    OpenAIRE

    Saha Rajsekhar; Mishra Aditya Kumar

    2011-01-01

    A fungus is a member of a large group of eukaryotic organisms that includes microorganisms such as yeasts and molds (British English: moulds), as well as the more familiar mushrooms. These organisms are classified as a kingdom, Fungi, which are separate from plants, animals, and bacteria. One major difference is that fungal cells have cell walls that contain chitin, unlike the cell walls of plants, which contain cellulose. Many fungi play a crucial role in decomposition (breaking things down)...

  6. The agricultural pathology of ant fungus gardens

    OpenAIRE

    Currie, Cameron R; Mueller, Ulrich G.; Malloch, David

    1999-01-01

    Gardens of fungus-growing ants (Formicidae: Attini) traditionally have been thought to be free of microbial parasites, with the fungal mutualist maintained in nearly pure “monocultures.” We conducted extensive isolations of “alien” (nonmutualistic) fungi from ant gardens of a phylogenetically representative collection of attine ants. Contrary to the long-standing assumption that gardens are maintained free of microbial pathogens and parasites, they are in fact host to specialized parasites th...

  7. Photometric brown-dwarf classification

    CERN Document Server

    Skrzypek, N

    2013-01-01

    We have developed a method "photo-type" to identify and accurately classify L and T dwarfs, onto the standard system, from photometry alone. We combine SDSS, UKIDSS and WISE data and classify point sources by comparing the izYJHKW1W2 colours against template colours for quasars, stars, and brown dwarfs. In a sample of $6.5\\times10^6$ bright point sources, J$<$17.5, from 3150 deg$^2$, we identify and type 898 L and T dwarfs, making this the largest homogeneously selected sample of brown dwarfs to date. The sample includes 713 (125) new (previously known) L dwarfs and 21 (39) T dwarfs. For the previously-known sources, the scatter in the plot of photo-type vs spectral type indicates that our photo-types are accurate to 1.5 (1.0) sub-types rms for L (T) dwarfs. Peculiar objects and candidate unresolved binaries are identified.

  8. Phenotypic classes of phenoloxidase-negative mutants of the lignin-degrading fungus Phanerochaete chrysosporium

    International Nuclear Information System (INIS)

    This paper reports the isolation of phenoloxidase-negative mutants of the white-rot fungus Phanerochaete chrysosporium and the results of a survey of idiophasic functions among these mutants. The mutant strains were isolated from a medium containing o-anisidine after gamma irradiation of wild-type spores and fell into four classes, divided by the manner in which they mineralized 14C-lignin wheat lignocellulose. Examples are strain LMT7, which degraded lignin at a rate similar to that of the wild type; strain LMT26, in which degradation was enhanced; strain LMT16, whose degradation rate was apparently unaffected, although the onset of lignin attack was delayed compared with that in the wild type; and strain LMT24, which was unable to evolve significant amounts of 14CO2 from the radiolabeled substrate. The mutants were not necessarily defective in other functions associated with idiophasic activities (intracellular cyclic AMP levels, sporulation, extracellular glucan production, veratryl alcohol synthesis). The authors conclude that phenoloxidase activity as detected by the o-anisidine plate test is not necessary for lignin degradation. In addition, mutations resulting in the loss of lignin-degrading ability were not necessarily pleiotropic with other idiophasic functions

  9. Microlensing, Brown Dwarfs and GAIA

    CERN Document Server

    Evans, N W

    2014-01-01

    The GAIA satellite can precisely measure the masses of nearby brown dwarfs and lower main sequence stars by the microlensing effect. The scientific yield is maximised if the microlensing event is also followed with ground-based telescopes to provide densely sampled photometry. There are two possible strategies. First, ongoing events can be triggered by photometric or astrometric alerts by GAIA. Second, events can be predicted using known high proper motion stars as lenses. This is much easier, as the location and time of an event can be forecast. Using the GAIA source density, we estimate that the sample size of high proper motion ($>300$ mas yr$^{-1}$) brown dwarfs needed to provide predictable events during the 5 year mission lifetime is surprisingly small, only of the order of a hundred. This is comparable to the number of high proper motion brown dwarfs already known from the work of the UKIDSS Large Area Survey and the all-sky WISE satellite. Provided the relative parallax of the lens and the angular Ein...

  10. Ultrastructure of the Rust Fungus Puccinia miscanthi in the Teliospore Stage Interacting with the Biofuel Plant Miscanthus sinensis

    Directory of Open Access Journals (Sweden)

    Ki Woo Kim

    2015-09-01

    Full Text Available Interaction of the the rust fungus Puccinia miscanthi with the biofuel plant Miscanthus sinensis during the teliospore phase was investigated by light and electron microscopy. P. miscanthi telia were oval-shaped and present on both the adaxial and abaxial leaf surfaces. Teliospores were brown, one-septate (two-celled, and had pedicels attached to one end. Transmission electron microscopy revealed numerous electron-translucent lipid globules in the cytoplasm of teliospores. Extensive cell wall dissolution around hyphae was not observed in the host tissues beneath the telia. Hyphae were found between mesophyll cells in the leaf tissues as well as in host cells. Intracellular hyphae, possibly haustoria, possessed electron-dense fungal cell walls encased by an electron-transparent fibrillar extrahaustorial sheath that had an electron-dense extrahaustorial membrane. The infected host cells appeared to maintain their membrane-bound structures such as nuclei and chloroplasts. These results suggest that the rust fungus maintains its biotrophic phase with most mesophyll cells of M. sinensis. Such a nutritional mode would permit the rust fungus to obtain food reserves for transient growth in the course of host alteration.

  11. Browning boreal forests of western North America

    Science.gov (United States)

    Verbyla, David

    2011-12-01

    , suggesting that direct temperature stress might be a factor in some species. Since warm growing seasons are also typically dry growing seasons, direct temperature stress and moisture stress could occur simultaneously. For example, 2004 was the warmest summer in over 200 years in boreal Alaska (Barber et al 2004) but it was also during a drought with less than 50 mm of summer precipitation recorded in Fairbanks. In Fairbanks, the length of the growing season, as defined as the period above freezing, has increased by 45 per cent over the past 100 years, with no significant increase in precipitation (Wendler and Shulski 2009). Regional winter runoff has increased, likely associated with permafrost thawing (Brabets and Walvoord 2009), while surface water has decreased, likely associated with increased evapotranspiration (Riordan et al 2006, Anderson et al 2007, Berg et al 2009). The mean annual air temperature in boreal Alaska has increased by over 1.5 °C during the past 50 years (Stafford et al 2000), and is projected to increase by 3-7 °C by end of this century (Walsh et al 2008). Thus, it would be surprising if a declining NDVI trend was not occurring in the western boreal region of North America as the climate continues to warm. Insects and disease in the North American boreal forest may also affect the NDVI browning trends (Malmström and Raffa 2000), as the life histories of damaging insects may be linked to a warming boreal climate. For example, warmer temperatures contributed to the spruce beetle outbreaks in Alaska with a reduction in the beetle life cycle from two years to one year (Berg et al 2006). Thus, as the boreal climate continues to warm, tree growth reduction and mortality from insects and diseases may become more substantial. In boreal Alaska, recent alder dieback and mortality is likely to be related to alder's susceptibility to a canker-causing fungus in drought years (Ruess et al 2009). Recent widespread and prolonged outbreaks of aspen leaf miner and a

  12. Developmental and metabolic plasticity of white-skinned grape berries in response to botrytis cinerea during noble rot

    OpenAIRE

    Blanco-Ulate, B; Amrine, KCH; Collins, TS; Rivero, RM; Vicente, AR; Morales-Cruz, A; Doyle, CL; Ye, Z.; Allen, G.; Heymann, H; Ebeler, SE; Cantu, D.

    2015-01-01

    © 2015 American Society of Plant Biologists. All rights reserved. Noble rot results from exceptional infections of ripe grape (Vitis vinifera) berries by Botrytis cinerea. Unlike bunch rot, noble rot promotes favorable changes in grape berries and the accumulation of secondary metabolites that enhance wine grape composition. Noble rot-infected berries of cv Sémillon, a white-skinned variety, were collected over 3 years from a commercial vineyard at the same time that fruit were harvested for ...

  13. Fungus-Growing Termites Originated in African Rain Forest

    DEFF Research Database (Denmark)

    Aanen, Duur Kornelis; Eggleton, Paul

    2005-01-01

    consumed (cf. [ [1] and [2] ]). Fungus-growing termites are found throughout the Old World tropics, in rain forests and savannas, but are ecologically dominant in savannas [ 3 ]. Here, we reconstruct the ancestral habitat and geographical origin of fungus-growing termites. We used a statistical model of...... fungus growing by termites is ecologically most successful under the variable, unfavorable conditions of the savanna, it seems to have evolved under the more constant and favorable conditions of the rain forest....

  14. First report of Calonectria hongkongensis causing fruit rot of rambutan (Nephelium lappaceum L.)

    Science.gov (United States)

    Fruit rot is a major pre- and post-harvest disease problem in rambutan orchards. In 2011, fruit rot was observed at the USDA-TARS orchards in Mayaguez, Puerto Rico. Infected fruit were collected and tissue sections (1 mm2) were superficially sterilized with 70% ethanol and 0.5% sodium hypochlorite. ...

  15. The persistence of Gliocephalotrichum bulbilium and G. simplex causing fruit rot of rambutan in Puerto Rico

    Science.gov (United States)

    Fruit rot of rambutan (Nephelium lappaceum L.) is a pre and post-harvest disease problem that affects fruit quality. Significant post-harvest losses have occurred worldwide and several pathogens have been identified in Malaysia, Costa Rica, Hawaii, Thailand, and Puerto Rico. In 2011, fruit rot was o...

  16. Sorghum pathology and biotechnology - A fungal disease perspective: Part II. Anthracnose, stalk rot, and downy mildew

    Science.gov (United States)

    Foliar diseases and stalk rots are among the most damaging diseases of sorghum in terms of lost production potential, thus commanding considerable research time and expenditure. This review will focus on anthracnose, a fungal disease that causes both foliar symptoms and stalk rots along with the st...

  17. The effect of long term storage on bacterial soft rot resistance in potato

    Science.gov (United States)

    Bacterial soft rot is a serious disease in potato (Solanum tuberosum L.), causing rapid tuber tissue maceration and, consequently, marketable yield loss. Soft rot bacteria, especially Pectobacterium carotovorum subsp. carotovorum (Pbc), are favored by moist conditions, which are prevalent in large p...

  18. Effect of actigard and other new fungicides on phytophthora fruit rot of watermelon

    Science.gov (United States)

    Fruit rot, caused by Phytophthora capsici is an emerging disease in most watermelon producing regions of Southeast U.S. Between 2003 and 2008, we observed many watermelon farms in Georgia, South Carolina, and North Carolina, where growers did not harvest the crop due to severe fruit rot. The Natio...

  19. Effect of Cultural Practices and Fungicides on Phytophthora Fruit Rot of Watermelon in the Carolinas

    Science.gov (United States)

    Phytophthora fruit rot, caused by Phytophthora capsici, is an important and emerging disease of watermelon (Citrullus lanatus) in the Southeastern U.S. To develop strategies to manage Phytophthora fruit rot, we evaluated the effects of two cultural practices (raised bare ground and plastic mulched ...

  20. Interaction of Rhizoctonia solani and Rhizopus stolonifer Causing Root Rot of Sugar Beet

    Science.gov (United States)

    In recent years, growers in Michigan and other sugar beet production areas of the United States have reported increasing incidence of root rot with little or no crown or foliar symptoms in sugar beet with Rhizoctonia crown and root rot. In addition, Rhizoctonia-resistant beets have been reported wit...

  1. Response of sugar beet recombinant inbred lines to post-harvest rot fungi

    Science.gov (United States)

    Sugar beet is commonly stored in outdoor piles prior to processing. During this storage period the crop is subject to multiple post-harvest rots. Resistance to three post harvest rots was identified in two sugar beet germplasm in the 1970s, but there has been little work done on host resistance to p...

  2. Response of sugar beet (Beta vulgaris) recombinant inbred lines to post-harvest rot fungi

    Science.gov (United States)

    Sugar beet (Beta vulgaris) is commonly stored in outdoor piles prior to processing for food and animal feed. During this storage period the crop is subject to multiple post-harvest rots. Resistance to three post harvest rots was identified in two sugar beet germplasm in the 1970s, but there has been...

  3. Experimental Sugar Beet Cultivars Evaluated for Resistance Bacterial Root Rot in Idaho, 2008

    Science.gov (United States)

    Bacterial root rot of sugar beet caused by Leuconostoc mesenteroides subsp. dextranicum is a disease problem recently described in the United States. To ameliorate the impact of bacterial root rot on sucrose loss in the field, storage piles, and factories, a study was conducted to identify resistan...

  4. Influence of Rhizoctonia-Bacterial root rot complex on storability of sugar beet

    Science.gov (United States)

    The root rot complex, caused by Rhizoctonia solani and Leuconostoc mesenteroides, can lead to yield loss in the field but may also lead to problems with sucrose loss in storage. Thus, studies were conducted to investigate if placing sugar beet roots suffering from root rot together with healthy roo...

  5. Evaluation of Pseudomonas syringae Strain ESC11 for Biocontrol of Crown Rot and Anthracnose of Banana

    Science.gov (United States)

    Pseudomonas syringae strain ESC11, and 250 'g/ml each of thiabendazole (TBZ) and imazalil reduced crown rot of banana caused by a Fusarium sp. by 0-88% and 73-88%, respectively, in laboratory experiments. ESC11 alone did not significantly reduce rot, mold, or anthracnose in most field trials. TBZ an...

  6. Infection of apple fruit by Sphaeropsis pyriputrescens in the orchard in relation to Sphaeropsis rot in storage

    Science.gov (United States)

    Sphaeropsis rot, caused by Sphaeropsis pyriputrescens, is a recently recognized postharvest fruit rot disease of apple in the United States. The objectives of this study were to determine the timing of apple fruit infection in the orchard in relation to development of Sphaeropsis rot in storage and ...

  7. ISOLATION AND IDENTIFICATION OF BACTERIAL CAUSING SOFT ROT DESEASE ON STRAWBERRY FRUIT (Fragaria x ananassa

    Directory of Open Access Journals (Sweden)

    Made Mega Yuliasari

    2015-03-01

    Full Text Available Soft rot on strawberry fruit was found in strawberry (F. x ananassa plantation in Candi Kuning, Bedugul, Bali. Soft rot on strawberry fruit can be caused by microorganism i.e. bacteria. Objectives of the research were to isolate pathogen causing soft rot on strawberry fruit with plating method and to identify bacteria causing soft rot by using Kit MicrogenTM GNA+B-ID System and Bergey’s Manual of Determinative Bacteriology reference (Holt et al., 1994. Results showed there were five isolates of bacteria (IB-1, IB-2, IB-3, IB-4, and IB-5. Positive result of Postulat Koch showed that bacteria causing soft rot on strawberry is IB-1. Identification that was done by using Kit MicrogenTM GNA+B-ID System and Bergey’s Manual of Determinative Bacteriology reference (Holt et al., 1994, showed that the isolate IB-1 is Weeksella.

  8. The plant cell wall decomposing machinery underlies the functional diversity of forest fungi

    Energy Technology Data Exchange (ETDEWEB)

    Eastwood, Daniel C.; Floudas, Dimitrios; Binder, Manfred; Majcherczyk, Andrzej; Schneider, Patrick; Aerts, Andrea; Asiegbu, Fred O.; Baker, Scott E.; Barry, Kerrie; Bendiksby, Mika; Blumentritt, Melanie; Coutinho, Pedro M.; Cullen, Dan; Vries, Ronald P. de; Gathman, Allen; Goodell, Barry; Henrissat, Bernard; Ihrmark, Katarina; Kauserud, Hä; vard,; Kohler, Annegret; LaButti, Kurt; Lapidus, Alla; Lavin, José; L.; Lee, Yong-Hwan; Lindquist, Erika; Lilly, Walt; Lucas, Susan; Morin, Emmanuelle; Murat, Claude; Oguiza, José; A.; Park, Jongsun; Pisabarro, Antonio G.; Riley, Robert; Rosling, Anna; Salamov, Asaf; Schmidt, Olaf; Schmutz, Jeremy; Skrede, Inger; Stenlid, Jan; Wiebenga, Ad; Xie, Xinfeng; Kü; es, Ursula; Hibbett, David S.; Hoffmeister, Dirk; Hö; gberg, Nils; Martin, Francis; Grigoriev, Igor V.; Watkinson, Sarah C.

    2011-05-01

    Brown rot decay removes cellulose and hemicellulose from wood?residual lignin contributing up to 30percent of forest soil carbon?and is derived from an ancestral white rot saprotrophy in which both lignin and cellulose are decomposed. Comparative and functional genomics of the ?dry rot? fungus Serpula lacrymans, derived from forest ancestors, demonstrated that the evolution of both ectomycorrhizal biotrophy and brown rot saprotrophy were accompanied by reductions and losses in specific protein families, suggesting adaptation to an intercellular interaction with plant tissue. Transcriptome and proteome analysis also identified differences in wood decomposition in S. lacrymans relative to the brown rot Postia placenta. Furthermore, fungal nutritional mode diversification suggests that the boreal forest biome originated via genetic coevolution of above- and below-ground biota

  9. Ozone as a stimulant for fungus sporulation

    Energy Technology Data Exchange (ETDEWEB)

    Richards, M.C.

    1949-01-01

    Ozone is generally considered to be a fungicide and is used in meat storage plants to retard the development of fungi. It has been used experimentally in apple storages for similar reasons. Certain fungi which produced few or no spores in culture when exposed to ozone produced spores abundantly. Sporulation was increased with Alternaria solani and Alternaria oleraccae with no impairment of germination. A third species of Alternaria, which did not produce spores normally in culture, produced numerous spores when growing cultures were exposed to ozone. Ninety-six per cent of the spores germinated. The squash black rot pathogen, Mycospherella citrullina, produces few or no pyenidia nor spores on potato-dextrose agar. When cultures are exposed to ozone, masses of spores are produced none of which will germinate. Ozone will stimulate fungi to sporulate. With certain fungi, however, ozone appears to be toxic to the spores.

  10. Surprising Legacies of Brown v. Board

    OpenAIRE

    Minow, Martha Louise

    2014-01-01

    Perhaps the most powerful legacy of Brown v. Board is this: opponents in varied political battles fifty years later each claim ties to the decision and its meaning. So although the analogy between Brown and same-sex marriage has divided Black clergy, each side vies to inherit the civil rights heritage. President George W. Bush invoked Brown in opposing race-conscious college admission practices. The success of Brown in reshaping the moral landscape has been so profound that I fear we do not f...

  11. BROWN TUMOR OF THE FACIAL BONES

    Directory of Open Access Journals (Sweden)

    Violeta Trandafir

    2010-11-01

    Full Text Available Brown tumor arises as a direct result of the effect of parathyroid hormone on bone tissue in some patients with hyperparathyroidism. The lesion localizes in areas of intense bone resorbtion, and the bone defect becomes filled with fibroblastic tissue that can deform the bone and simulate a neoplastic process. Brown tumors can affect the mandible, maxilla, clavicle, ribs and pelvic bones. Most patients with hyperparathyroidism are asymptomatic. Skeletal changes may represent the first manifestations of the disease. Radiologically, brown tumor in the jaws presents as a well-defined radiolucent osteolytic lesion, making it hard to differentiate it from other maxillary expansive lesions that can present with a similar imaging. Brown tumors exhibit no pathognomonic histologic changes. Differentiating between a brown tumor and other giant-cell tumors may be very difficult, even with histology. A final diagnosis can be defined only by evaluating the radiological findings with histopathological, laboratory and clinical data. At present, brown tumor is considered as a reparative cellular process rather than a real neoplasia. This phenomenon is considered as pathognomonic of hyperparathyroidism secondary to renal failure, especially in patients on long-term hemodialysis. The initial treatment of brown tumor involves control of hyperparathyroidism, regardless of whether it is primary or secondary. The clinical management of brown tumor aims primarily to reduce the elevated parathyroid hormone levels by pharmacological treatment. Surgical treatment is reserved to nonresponders or to patients with painful symptomatology or alteration of normal function. Brown tumor can recur if hyperparathyroidism persists or recurs.

  12. The Engrailed-1 Gene Stimulates Brown Adipogenesis

    Directory of Open Access Journals (Sweden)

    Chuanhai Zhang

    2016-01-01

    Full Text Available As a thermogenic organ, brown adipose tissue (BAT has received a great attention in treating obesity and related diseases. It has been reported that brown adipocyte was derived from engrailed-1 (EN1 positive central dermomyotome. However, functions of EN1 in brown adipogenesis are largely unknown. Here we demonstrated that EN1 overexpression increased while EN1 knockdown decreased lipid accumulation and the expressions of key adipogenic genes including PPARγ2 and C/EBPα and mitochondrial OXPHOS as well as BAT specific marker UCP1. Taken together, our findings clearly indicate that EN1 is a positive regulator of brown adipogenesis.

  13. Incidence and management of the peach fruit brown rot%桃褐腐病的发生和防治

    Institute of Scientific and Technical Information of China (English)

    李世访; 陈策

    2009-01-01

    链核盘菌(Monilinia spp.)所致的褐腐病是核果类果树的主要病害之一.我国16省(区)记载发生此病.本文综述了前人关于病原菌鉴定、分布、侵染特点和病害循环等方面的研究进展,对褐腐病防治策略和防治中的难点进行了讨论.

  14. Control techniques for brown rot of fruit tree%果树褐腐病的防治技术

    Institute of Scientific and Technical Information of China (English)

    高兴; 候立新; 孙忠义; 张秀丽

    2009-01-01

    褐腐病主要危害苹果、梨、桃、杏、李及樱桃等果树的果实.在8~9月份喷50%甲基托布津可湿性粉剂800×10-6等可有效预防褐腐病的发生;在果树落花后10 d左右至采收前1个月,每隔半月左右喷1次50%多菌灵可湿性粉剂800×10-6~1 000×10-6等可有效防治褐腐病.

  15. Identifying and characterizing microflora of stone fruits to select antagonists for control of brown rot with emphasis on latent infections

    Science.gov (United States)

    Fruit surface microflora has been the richest source of antagonists against fungi causing postharvest decays of fruit. The establishment of populations of these organisms and their interaction with decay causing pathogens in fruit wounds has been the basis for the development of current postharvest ...

  16. Identifying and characterizing microflora of stone fruits to select antagonists for control of brown rot with emphasis on latent infections

    Science.gov (United States)

    Fruit surface microflora has been the most productive source of antagonists against fungi causing postharvest decays of fruit. The establishment of populations of these organisms and their interaction with decay causing pathogens in fruit wounds has been the basis for the development of current pos...

  17. Bacteriophages of Soft Rot Enterobacteriaceae-a minireview.

    Science.gov (United States)

    Czajkowski, Robert

    2016-01-01

    Soft rot Enterobacteriaceae (Pectobacterium spp. and Dickeya spp., formerly pectinolytic Erwinia spp.) are ubiquitous necrotrophic bacterial pathogens that infect a large number of different plant species worldwide, including economically important crops. Despite the fact that these bacteria have been studied for more than 50 years, little is known of their corresponding predators: bacteriophages, both lytic and lysogenic. The aim of this minireview is to critically summarize recent ecological, biological and molecular research on bacteriophages infecting Pectobacterium spp. and Dickeya spp. with the main focus on current and future perspectives in that field. PMID:26626879

  18. Transformation optics with Fabry-Pérot resonances.

    Science.gov (United States)

    Sadeghi, M M; Li, Sucheng; Xu, Lin; Hou, Bo; Chen, Huanyang

    2015-01-01

    Transformation optics is a powerful tool to design various novel devices, such as invisibility cloak. Fantastic effects from this technique are usually accompanied with singular mappings, resulting in challenging implementations and narrow bands of working frequencies. Here in this article, Fabry-Pérot resonances in materials of extreme anisotropy are used to design various transformation optical devices that are not only easy to realize but also work well for a set of resonant frequencies (multiple frequencies). As an example, a prototype of a cylindrical concentrator is fabricated for microwaves. PMID:25726924

  19. Brown Fat and Browning for the Treatment of Obesity and Related Metabolic Disorders

    Directory of Open Access Journals (Sweden)

    So Hun Kim

    2016-02-01

    Full Text Available Brown fat is a specialized fat depot that can increase energy expenditure and produce heat. After the recent discovery of the presence of active brown fat in human adults and novel transcription factors controlling brown adipocyte differentiation, the field of the study of brown fat has gained great interest and is rapidly growing. Brown fat expansion and/or activation results in increased energy expenditure and a negative energy balance in mice and limits weight gain. Brown fat is also able to utilize blood glucose and lipid and results in improved glucose metabolism and blood lipid independent of weight loss. Prolonged cold exposure and beta adrenergic agonists can induce browning of white adipose tissue. The inducible brown adipocyte, beige adipocyte evolving by thermogenic activation of white adipose tissue have different origin and molecular signature from classical brown adipocytes but share the characteristics of high mitochondria content, UCP1 expression and thermogenic capacity when activated. Increasing browning may also be an efficient way to increase whole brown fat activity. Recent human studies have shown possibilities that findings in mice can be reproduced in human, making brown fat a good candidate organ to treat obesity and its related disorders.

  20. Metabolites from mangrove endophytic fungus Dothiorella sp.

    Institute of Scientific and Technical Information of China (English)

    XUQingyan; WANGJianfeng; HUANGYaojian; ZHENGZhonghui; SONGSiyang; ZHANGYongmin; SUWenjin

    2004-01-01

    Mangroves are special woody plant communities in the intertidal zone of tropical and subtropical coasts. They prove to be a natural microorganisms and new metabolites storage. In the study of mangrove endophytic fungi metabolites, four new compounds, Compounds 1, 2, 3 and 4, as well as a known octaketide, cytosporone B (5), are isolated from an endophytic fungus, Dothiorella sp., HTF3. They all show cytotoxic activities. The elucidation of these structures is mainly based on 1D/2D NMR and ESI-MS spectral analyses.

  1. Use of gamma irradiation for control of postharvest Botrytis cinerea bunch rot of table grapes in cold storage

    International Nuclear Information System (INIS)

    The feasibility of employing gamma irradiation for the control of postharvest Botrytis bunch rot of table grapes in cold storage was studied. Table grape cultivars from commercial vineyards in the Paarl and Hex River Valley areas were packed as for export in vented corrugated cartons. The cartons were irradiated at 0; 1,5; 2,0 or 3,0 kGy. After irradiation, grapes were kept for 4 weeks at -0,5 degrees C, followed by another week at 10 degrees C. Less decay was observed when table grapes were irradiated soon after picking than after a storage period. Irradiation at 1,5; 2,0 and 3,0 kGy reduced the effects of Botrytis cinerea on Barlinka grapes stored without sulphur dioxide. Irradiation of Waltham Cross and Barlinka grapes at a dose of 2,0 kGy, combined with reduced SO2 treatments, resulted in similar control as with the standard practice of enclosing an SO2 generator. Browning of Waltham Cross berries and bacterial and yeast growth occurred on the surface of berries irradiated at a dose of 3,0 kGy. Irradiation had no adverse effect on other aspects of quality. 25 refs., 3 tabs

  2. Innate immune system targets asthma-linked fungus for destruction

    OpenAIRE

    Whyte, Barry James

    2008-01-01

    A new study shows that the innate immune system of humans is capable of killing a fungus linked to airway inflammation, chronic rhinosinusitis, and bronchial asthma. Researchers at Mayo Clinic and the Virginia Bioinformatics Institute at Virginia Tech have revealed that eosinophils, a particular type of white blood cell, exert a strong immune response against the environmental fungus Alternaria alternata.

  3. Phomalactone from a phytopathogenic fungus infecting Zinnia elegans (Asteraceae) leaves

    Science.gov (United States)

    Zinnia elegans plants are infected by a fungus that causes necrosis with dark red spots particularly in late spring to the middle of summer in the Mid-South part of the United States. This fungal disease when untreated causes the leaves to wilt and eventually kills the plant. The fungus was isolated...

  4. CHARACTERIZATION OF AN ANAEROBIC FUNGUS FROM LLAMA FECES

    NARCIS (Netherlands)

    MARVINSIKKEMA, FD; LAHPOR, GA; KRAAK, MN; GOTTSCHAL, JC; PRINS, RA

    1992-01-01

    An anaerobic fungus was isolated from Hama faeces. Based on its morphological characteristics, polyflagellated zoospores, extensive rhizoid system and the formation of monocentric colonies, the fungus is assigned to the genus Neocallimastix. Neocallimastix sp. L2 is able to grow on several poly-, ol

  5. Brown dwarf disks with ALMA

    Energy Technology Data Exchange (ETDEWEB)

    Ricci, L.; Isella, A. [Department of Astronomy, California Institute of Technology, MC 249-17, Pasadena, CA 91125 (United States); Testi, L.; De Gregorio-Monsalvo, I. [European Southern Observatory, Karl-Schwarzschild-Strasse 2, D-85748 Garching (Germany); Natta, A. [INAF-Osservatorio Astrofisico di Arcetri, Largo E. Fermi 5, I-50125 Firenze (Italy); Scholz, A., E-mail: lricci@astro.caltech.edu [School of Cosmic Physics, Dublin Institute for Advanced Studies, 31 Fitzwilliam Place, Dublin 2 (Ireland)

    2014-08-10

    We present Atacama Large Millimeter/submillimeter Array continuum and spectral line data at 0.89 mm and 3.2 mm for three disks surrounding young brown dwarfs and very low mass stars in the Taurus star forming region. Dust thermal emission is detected and spatially resolved for all the three disks, while CO(J = 3-2) emission is seen in two disks. We analyze the continuum visibilities and constrain the disks' physical structure in dust. The results of our analysis show that the disks are relatively large; the smallest one has an outer radius of about 70 AU. The inferred disk radii, radial profiles of the dust surface density, and disk to central object mass ratios lie within the ranges found for disks around more massive young stars. We derive from our observations the wavelength dependence of the millimeter dust opacity. In all the three disks, data are consistent with the presence of grains with at least millimeter sizes, as also found for disks around young stars, and confirm that the early stages of the solid growth toward planetesimals occur also around very low-mass objects. We discuss the implications of our findings on models of solids evolution in protoplanetary disks, the main mechanisms proposed for the formation of brown dwarfs and very low-mass stars, as well as the potential of finding rocky and giant planets around very low-mass objects.

  6. Isolation of glycoproteins from brown algae.

    OpenAIRE

    Surendraraj, Alagarsamy; Farvin Koduvayur Habeebullah , Sabeena; Jacobsen, Charlotte

    2015-01-01

    The present invention relates to a novel process for the isolation of unique anti-oxidative glycoproteins from the pH precipitated fractions of enzymatic extracts of brown algae. Two brown seaweeds viz, Fucus serratus and Fucus vesiculosus were hydrolysed by using 3 enzymes viz, Alcalase, Viscozyme and Termamyl and the glycoproteins were isolated from these enzyme extracts.

  7. The Indirectness of Young Goodman Brown

    Institute of Scientific and Technical Information of China (English)

    袁臣

    2010-01-01

    Young Goodman Brown is one the best short fictions written by Nathaniel Hawthorne in 1835. The indirectness of the Young Goodman Brown can be seen from the produce, narration and the characteristics of the short fiction. The indirectness of expression or description leaves enough space for readers to understand the theme of the short fiction by themselves.

  8. Microlensing Binaries with Candidate Brown Dwarf Companions

    DEFF Research Database (Denmark)

    Shin, I.-G; Han, C.; Gould, A.;

    2012-01-01

    Brown dwarfs are important objects because they may provide a missing link between stars and planets, two populations that have dramatically different formation histories. In this paper, we present the candidate binaries with brown dwarf companions that are found by analyzing binary microlensing ...

  9. Isolation of glycoproteins from brown algae

    DEFF Research Database (Denmark)

    2015-01-01

    The present invention relates to a novel process for the isolation of unique anti-oxidative glycoproteins from the pH precipitated fractions of enzymatic extracts of brown algae. Two brown seaweeds viz, Fucus serratus and Fucus vesiculosus were hydrolysed by using 3 enzymes viz, Alcalase, Viscozyme...

  10. New Development Trend of Edible Fungus Industry in China

    Institute of Scientific and Technical Information of China (English)

    2012-01-01

    We elaborate support system of edible fungus industry from outlook on ecological economic development, legislation and standardization of variety approval, multiple-function innovation platform of industrial development research, and perfect talent cultivation and education system. Besides, we analyze the development trend of edible fungus industry from competitive advantages, position and role in national food security, industrial development trend driven by internal demand, diversified industrial development model, division of labor within the industry, and expansion of industrial chain. Then, from the point of zoning and planning of edible fungus industry, we put forward suggestions that it should start from modern industrial system and take the industrial cluster development and optimization as guidance. In addition, we present technical innovation direction of industrial development. It is proposed to strengthen propaganda, build industrial cultural atmosphere, and expand social cognition degree of edible fungus industry to promote its redevelopment. Finally, it is expected to promote international influence of edible fungus industry through experts appealing for policy support.

  11. Antimicrobial chemical constituents from endophytic fungus Phomasp.

    Institute of Scientific and Technical Information of China (English)

    Hidayat Hussain; Siegfried Draeger; Barbara Schulz; Karsten Krohn; Ines Kock; Ahmed Al-Harrasi; Ahmed Al-Rawahi; Ghulam Abbas; Ivan R Green; Afzal Shah; Amin Badshah; Muhammad Saleem

    2014-01-01

    Objective:To evaluate the antimicrobial potential of different extracts of the endophytic fungus Phomasp. and the tentative identification of their active constituents.Methods:The extract and compounds were screened for antimicrobial activity using theAgarWellDiffusionMethod. Four compounds were purified using column chromatography and their structures were assigned using1H and13CNMR spectra,DEPT,2DCOSY,HMQC andHMBC experiments.Results:The ethyl acetate fraction ofPhomasp. showed good antifungal, antibacterial, and algicidal properties.One new dihydrofuran derivative, named phomafuranol(1), together with three known compounds, phomalacton(2),(3R)-5-hydroxymellein(3) and emodin(4) were isolated from the ethyl acetate fraction ofPhomasp.Preliminary studies indicated that phomalacton(2) displayed strong antibacterial, good antifungal and antialgal activities.Similarly(3R)-5-hydroxymellein (3) and emodin(4) showed good antifungal, antibacterial and algicidal properties.Conclusions:Antimicrobial activities of the ethyl acetate fraction of the endophytic fungusPhomasp. and isolated compounds clearly demonstrate thatPhomasp. and its active compounds represent a great potential for the food, cosmetic and pharmaceutical industries.

  12. Maize Cob Rot in Kenya and Its Association with Stalk Borer Damage

    International Nuclear Information System (INIS)

    Cob rots are a major cause of crop loss in areas such as western Kenya that experience prolonged rainfall during the period of crop maturation. Cob rot fungi cause spoilage of the grain and some of them produce mycotoxins which can pose a health risk to humans and animals consuming foods prepared from contaminate grain. survey conducted in western Kenya in 1998 showed that cob rot incidence exceeded 20%. In the following year when rainfall was greater around the harvest period, cob rot fungi affected 68% of cobs. in 1998 stalk borer larvae (mainly Busseola fusca) damaged 20% of the cobs and there was a strong correlation (R= 0.87) between cob rot incidence and borer damage. In 1999 almost half of the cobs sampled showed evidence of borer damage. The result indicate that the high cob rot incidence in this pert of Kenya is due to stalk bore damage, which predisposes the cobs to fungal infection, and that management of the borer would greatly decrease cob rot incidence

  13. Effect of Environment and Sugar Beet Genotype on Root Rot Development and Pathogen Profile During Storage.

    Science.gov (United States)

    Liebe, Sebastian; Varrelmann, Mark

    2016-01-01

    Storage rots represent an economically important factor impairing the storability of sugar beet by increasing sucrose losses and invert sugar content. Understanding the development of disease management strategies, knowledge about major storage pathogens, and factors influencing their occurrence is crucial. In comprehensive storage trials conducted under controlled conditions, the effects of environment and genotype on rot development and associated quality changes were investigated. Prevalent species involved in rot development were identified by a newly developed microarray. The strongest effect on rot development was assigned to environment factors followed by genotypic effects. Despite large variation in rot severity (sample range 0 to 84%), the spectrum of microorganisms colonizing sugar beet remained fairly constant across all treatments with dominant species belonging to the fungal genera Botrytis, Fusarium, and Penicillium. The intensity of microbial tissue necrotization was strongly correlated with sucrose losses (R² = 0.79 to 0.91) and invert sugar accumulation (R² = 0.91 to 0.95). A storage rot resistance bioassay was developed that could successfully reproduce the genotype ranking observed in storage trials. Quantification of fungal biomass indicates that genetic resistance is based on a quantitative mechanism. Further work is required to understand the large environmental influence on rot development in sugar beet. PMID:26474333

  14. Podredumbres basales de Gypsophila paniculata (Caryophyllaceae: Agentes causales y su patogenicidad potencial sobre Dianthus caryophyllus (Caryophyllaceae Basal rots of Gypsophila paniculata (Caryophyllaceae: Causal agents and its potential pathogenicity on Dianthus caryophyllus (Caryophyllaceae

    Directory of Open Access Journals (Sweden)

    Silvia María Wolcan

    basal stem wounds with different strains of each fungus. Crown rot was incited by P. nicotianae causing fast decay of leaves and stems and wet soft rot of the crowns, and by R. solani causing slower decay and disintegrated crown tissues. Basal stem rot was incited by F. graminearum , which was described for the first time on G. paniculata and enter through wounded tissues. Under experimental conditions some strains of R. solani and F. graminearum isolated from gipsofila caused stem rot on carnation plants and only some strains of P. niconianae were weakly pathogenic.

  15. Effect of Trichoderma sp. on Sclerotium rolfsii, the Causative Agent of Collar Rot on Zamioculcas zamiifolia and an on Farm Method to Mass Produce Trichoderma species

    Directory of Open Access Journals (Sweden)

    R.L.C. Wijesundera

    2010-01-01

    Full Text Available The antagonistic effect of three local isolates of Trichoderma viride and one local isolate of Trichoderma harzianum were tested against the pathogenic fungus Sclerotium rolfsii. The latter organism is responsible for major loss due to collar rot of the ornamental crop Zamioculcas zamiifolia in Sri Lanka. The disease causes massive losses. The antagonistic potential of the local isolates against the phytopathogenic fungi Sclerotium rolfsii was investigated in dual culture, poison food technique, pot trials and field trials on Zamioculcas zamiifolia plants. All Trichoderma isolates tested under in-vitro conditions significantly inhibited the growth of S. rolfsii. Of these isolates, Trichoderma viride isolate Tv1, showed highest percentage inhibition and was thus selected for in vivo field trials. Data recorded from bi monthly field application of this organism over the two growing seasons, confirmed the success of the treatment in controlling collar rot disease at the economic threshold level. Field application of testing isolate T. viride Tv1 as a conidial suspension (1011 cfu mL-1 greatly reduced the disease incidence of Zamioculcas zamiifolia plants by a percentage of 75.54%. On farm mass production of this isolate was developed to help facilitate the establishment of an integrated eco-friendly disease management system for growers of Zamioculcas zamiifolia. Different media was also evaluated to mass produce the Trichoderma isolate. The media evaluated in this study included the solid substrates barley seeds, paddy, cow pea, maize and sorghum and semi solid, liquid substrates such as potato dextrose, rice extract, paddy extracts, respectively. Although mycelial growth was fastest in barley and paddy media. And the highest yield of spores of the Trichoderma isolate was observed 7 days after inoculation in Barley and Paddy media.

  16. Transgenic sweet potato expressing thionin from barley gives resistance to black rot disease caused by Ceratocystis fimbriata in leaves and storage roots.

    Science.gov (United States)

    Muramoto, Nobuhiko; Tanaka, Tomoko; Shimamura, Takashi; Mitsukawa, Norihiro; Hori, Etsuko; Koda, Katsunori; Otani, Motoyasu; Hirai, Masana; Nakamura, Kenzo; Imaeda, Takao

    2012-06-01

    Black rot of sweet potato caused by pathogenic fungus Ceratocystis fimbriata severely deteriorates both growth of plants and post-harvest storage. Antimicrobial peptides from various organisms have broad range activities of killing bacteria, mycobacteria, and fungi. Plant thionin peptide exhibited anti-fungal activity against C. fimbriata. A gene for barley α-hordothionin (αHT) was placed downstream of a strong constitutive promoter of E12Ω or the promoter of a sweet potato gene for β-amylase of storage roots, and introduced into sweet potato commercial cultivar Kokei No. 14. Transgenic E12Ω:αHT plants showed high-level expression of αHT mRNA in both leaves and storage roots. Transgenic β-Amy:αHT plants showed sucrose-inducible expression of αHT mRNA in leaves, in addition to expression in storage roots. Leaves of E12Ω:αHT plants exhibited reduced yellowing upon infection by C. fimbriata compared to leaves of non-transgenic Kokei No. 14, although the level of resistance was weaker than resistance cultivar Tamayutaka. Storage roots of both E12Ω:αHT and β-Amy:αHT plants exhibited reduced lesion areas around the site inoculated with C. fimbriata spores compared to Kokei No. 14, and some of the transgenic lines showed resistance level similar to Tamayutaka. Growth of plants and production of storage roots of these transgenic plants were not significantly different from non-transgenic plants. These results highlight the usefulness of transgenic sweet potato expressing antimicrobial peptide to reduce damages of sweet potato from the black rot disease and to reduce the use of agricultural chemicals. PMID:22212462

  17. Distribution and prevalence of crown rot pathogens affecting wheat crops in southern Chile

    OpenAIRE

    Ernesto Moya-Elizondo; Nolberto Arismendi; María Paz Castro; Herman Doussoulin

    2015-01-01

    Crown rot pathogens are associated with higher losses for wheat crop farmers, but information about the distribution and prevalence of these pathogens in Chile is inadequate. Distribution and prevalence of wheat (Triticum aestivum L.) crown rot pathogens were examined in a survey of 48 commercial fields from December 2011 to February 2012 in southern Chile. These fields were located between Collipulli (37°56'00" S; 72°26'39" W) and Purranque (40°50'30" S; 73°22'03" W). Severity of crown rot d...

  18. Primary metabolism plays a central role in moulding silicon-inducible brown spot resistance in rice.

    Science.gov (United States)

    Van Bockhaven, Jonas; Steppe, Kathy; Bauweraerts, Ingvar; Kikuchi, Shoshi; Asano, Takayuki; Höfte, Monica; De Vleesschauwer, David

    2015-10-01

    Over recent decades, a multitude of studies have shown the ability of silicon (Si) to protect various plants against a range of microbial pathogens exhibiting different lifestyles and infection strategies. Despite this relative wealth of knowledge, an understanding of the action mechanism of Si is still in its infancy, which hinders its widespread application for agricultural purposes. In an attempt to further elucidate the molecular underpinnings of Si-induced disease resistance, we studied the transcriptome of control and Si-treated rice plants infected with the necrotrophic brown spot fungus Cochliobolus miyabeanus. Analysis of brown spot-infected control plants suggested that C. miyabeanus represses plant photosynthetic processes and nitrate reduction in order to trigger premature senescence and cause disease. In Si-treated plants, however, these pathogen-induced metabolic alterations are strongly impaired, suggesting that Si alleviates stress imposed by the pathogen. Interestingly, Si also significantly increased photorespiration rates in brown spot-infected plants. Although photorespiration is often considered as a wasteful process, recent studies have indicated that this metabolic bypass also enhances resistance during abiotic stress and pathogen attack by protecting the plant's photosynthetic machinery. In view of these findings, our results favour a scenario in which Si enhances brown spot resistance by counteracting C. miyabeanus-induced senescence and cell death via increased photorespiration. Moreover, our results shed light onto the mechanistic basis of Si-induced disease control and support the view that, in addition to activating plant immune responses, Si can also reduce disease severity by interfering with pathogen virulence strategies. PMID:25583155

  19. Studies on Laccase Activity in the Filamentous Fungus Trichoderma reesei

    OpenAIRE

    Sekme, Semra; Atacı, Neşe; Arısan, İnci

    2014-01-01

    Laccase have been mainly studied in wood rot fungal species of the basidiomycetes family especiallyin white rot fungi. Studies in other fungal families are largely lacking. This study has evaluated laccaseactivity fromTrichoderma reesei in catechol based medium. Results showed that laccase enzyme from T.reesei was active in acidic pH range and that optimum pH was 4.5. The optimum temperature oflaccase from T. reesei was also 270C. Laccase activity in medium containing 10 gL-1 catechol was 1.2...

  20. Auroral Phenomena in Brown Dwarf Atmospheres

    Science.gov (United States)

    Pineda, J. Sebastian; Hallinan, Gregg

    2016-01-01

    Since the unexpected discovery of radio emission from brown dwarfs some 15 years ago, investigations into the nature of this emission have revealed that, despite their cool and neutral atmospheres, brown dwarfs harbor strong kG magnetic fields, but unlike the warmer stellar objects, they generate highly circularly polarized auroral radio emission, like the giant planets of the Solar System. Our recent results from Keck LRIS monitoring of the brown dwarf LSR1835+32 definitively confirm this picture by connecting the auroral radio emission to spectroscopic variability at optical wavelengths as coherent manifestations of strong large-scale magnetospheric auroral current systems. I present some of the results of my dissertation work to understand the nature brown dwarf auroral phenomena. My efforts include a survey of Late L dwarfs and T dwarfs, looking for auroral Hα emission and a concurrent survey looking for the auroral emission of H3+ from brown dwarfs with radio pulse detections. I discuss the potential connection of this auroral activity to brown dwarf weather phenomena and how brown dwarf aurorae may differ from the analogous emission of the magnetized giant planets in the Solar System.

  1. Bioactive Triterpenes from the Fungus Piptoporus betulinus

    Directory of Open Access Journals (Sweden)

    Zeyad Alresly

    2015-08-01

    Full Text Available Phytochemical investigation of the ethyl acetate extract of the fruiting bodies from the basidiomycete Piptoporus betulinus led to the isolation of a new bioactive lanostane triterpene identified as 3 b -acetoxy-16-hydroxy-24-oxo-5α-lanosta-8- ene-21-oic acid (1. In addition, ten known triterpenes, polyporenic acid A (5, polyporenic acid C (4, three derivatives of polyporenic acid A (8, 10, 11, betulinic acid (3, betulin (2, ergosterol peroxide (6, 9,11-dehydroergosterol peroxide (7, and fomefficinic acid (9, were also isolated from the fungus. All isolated compounds were tested for antimicrobial activity against some Gram-positive and Gram-negative bacteria as well as against a fungal strain. The new triterpene and some of the other compounds showed antimicrobial activity against Gram-positive bacteria.

  2. SYSTEMIC INFECTION AND RELATED FUNGUS: AN OVERVIEW

    Directory of Open Access Journals (Sweden)

    Saha Rajsekhar

    2011-06-01

    Full Text Available A fungus is a member of a large group of eukaryotic organisms that includes microorganisms such as yeasts and molds (British English: moulds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, Fungi, which are separate from plants, animals, and bacteria. One major difference is that fungal cells have cell walls that contain chitin, unlike the cell walls of plants, which contain cellulose. Many fungi play a crucial role in decomposition (breaking things down and returning nutrients to the soil. They are also used in medicine, an example is the antibiotic penicillin, as well as in industry and food preparation. In the present time the microbes are to be seen as disease causing organisms harming the mankind. The harm done by this community cannot be taken lightly as they are also useful in many ways. The above article is an effort to bring out the various fungal issued related to human.

  3. Engineering photonic Floquet Hamiltonians through Fabry-Pérot resonators

    Science.gov (United States)

    Sommer, Ariel; Simon, Jonathan

    2016-03-01

    In this paper we analyze an optical Fabry-Pérot resonator as a time-periodic driving of the (2D) optical field repeatedly traversing the resonator, uncovering that resonator twist produces a synthetic magnetic field applied to the light within the resonator, while mirror aberrations produce relativistic dynamics, anharmonic trapping and spacetime curvature. We develop a Floquet formalism to compute the effective Hamiltonian for the 2D field, generalizing the idea that the intra-cavity optical field corresponds to an ensemble of non-interacting, massive, harmonically trapped particles. This work illuminates the extraordinary potential of optical resonators for exploring the physics of quantum fluids in gauge fields and exotic space-times.

  4. Brown Dwarfs at the Exoplanet Mass Boundary

    Science.gov (United States)

    Faherty, J. K.; Cruz, K. L.; Rice, E. L.; Riedel, A.

    2014-10-01

    Young brown dwarfs and directly-imaged exoplanets have enticingly similar photometric and spectroscopic characteristics, indicating that their cool, low gravity atmospheres should be studied in concert. Similarities between the peculiar shaped H band, near and mid-IR photometry as well as location on color magnitude diagrams provide important clues about how to extract physical properties of planets from current brown dwarf observations. Our team has assigned >30 brown dwarfs to 10-150 Myr nearby moving groups. In so doing, we have discovered important diversity among this extremely low-mass (10 - 30 M_{Jup}) age-calibrated sample indicating that cloud properties play a critical role in their observables.

  5. Study on Extrusion Technological Parametersof Brown Rice

    Institute of Scientific and Technical Information of China (English)

    ZhuYongyi; ZhouXianqing; LingLizhong

    2001-01-01

    Abstract: Extrusion is an efficient measure to improve the texture and physic-chemical properties of brown rice. The polynomial degree two model of extrusiontechnological parameters and gelatinized degree, water absorption index, water solubleindex and moisture content of extruded matter was obtained by methods of single factorand response surface methodology, R2=0.9649, 0.8745, 0.9079, 0.8677. The optimaltechnoiogica! parameters of brown rice extrusion were figured out as follows:moisturecontent of brown rice, 11.42%, speed of screw, 30rpm, feeding speed, and 20rpm.

  6. Young Brown Dwarfs as Giant Exoplanet Analogs

    CERN Document Server

    Faherty, Jacqueline K; Rice, Emily L; Riedel, Adric

    2013-01-01

    Young brown dwarfs and directly-imaged exoplanets have enticingly similar photometric and spectroscopic characteristics, indicating that their cool, low gravity atmospheres should be studied in concert. Similarities between the peculiar shaped H band, near and mid-IR photometry as well as location on color magnitude diagrams provide important clues about how to extract physical properties of planets from current brown dwarf observations. In this proceeding we discuss systems newly assigned to 10-150 Myr nearby moving groups, highlight the diversity of this uniform age-calibrated brown dwarf sample, and reflect on their implication for understanding current and future planetary data.

  7. Comparative studies of the secretome of fungus-growing ants

    DEFF Research Database (Denmark)

    Linde, Tore; Grell, Morten Nedergaard; Schiøtt, Morten;

    2009-01-01

    Leafcutter ants of the species Acromyrmex echinatior live in symbiosis with the fungus Leucoagaricus gongylophorus. The ants harvest fragments of leaves and carry them to the nest where they place the material on the fungal colony. The fungus secretes a wide array of proteins to degrade the leaves...... into nutrients that the ants can feed on. The focus of this study is to discover, characterize and compare the secreted proteins. In order to do so cDNA libraries are constructed from mRNA extracted from the fungus material. The most efficient technology to screen cDNA libraries selectively for...

  8. Genetically based location from triploid populations and gene ontology of a 3.3-mb genome region linked to alternaria brown spot resistance in citrus reveal clusters of resistance genes

    OpenAIRE

    José Cuenca; Pablo Aleza; Antonio Vicent; Dominique Brunel; Patrick Ollitrault; Luis Navarro

    2013-01-01

    Genetic analysis of phenotypical traits and marker-trait association in polyploid species is generally considered as a challenge. In the present work, different approaches were combined taking advantage of the particular genetic structures of 2n gametes resulting from second division restitution (SDR) to map a genome region linked to Alternaria brown spot (ABS) resistance in triploid citrus progeny. ABS in citrus is a serious disease caused by the tangerine pathotype of the fungus Alternaria ...

  9. A new method to provide resistance to bacterial soft rot in plants

    OpenAIRE

    Bouwmeester, K.; Govers, F.

    2014-01-01

    The invention relates to a method for providing plants, preferably potato plants, with resistance to blackleg or soft rot caused by Pectobacterium carotovorum by providing them with a gene encoding the LecRK-I.9 protein.

  10. Defective active silicon uptake affects some components of rice resistance to brown spot.

    Science.gov (United States)

    Dallagnol, Leandro J; Rodrigues, Fabrício A; Mielli, Mateus V B; Ma, Jian F; Datnoff, Lawrence E

    2009-01-01

    Rice is known to accumulate high amounts of silicon (Si) in plant tissue, which helps to decrease the intensity of many economically important rice diseases. Among these diseases, brown spot, caused by the fungus Bipolaris oryzae, is one of the most devastating because it negatively affects yield and grain quality. This study aimed to evaluate the importance of active root Si uptake in rice for controlling brown spot development. Some components of host resistance were evaluated in a rice mutant, low silicon 1 (lsi1), defective in active Si uptake, and its wild-type counterpart (cv. Oochikara). Plants were inoculated with B. oryzae after growing for 35 days in a hydroponic culture amended with 0 or 2 mMol Si. The components of host resistance evaluated were incubation period (IP), relative infection efficiency (RIE), area under brown spot progress curve (AUBSPC), final lesion size (FLS), rate of lesion expansion (r), and area under lesion expansion progress curve (AULEPC). Si content from both Oochikara and lsi1 in the +Si treatment increased in leaf tissue by 219 and 178%, respectively, over the nonamended controls. Plants from Oochikara had 112% more Si in leaf tissue than plants from lsi1. The IP of brown spot from Oochikara increased approximately 6 h in the presence of Si and the RIE, AUBSPC, FLS, r, and AULEPC were significantly reduced by 65, 75, 33, 36, and 35%, respectively. In the presence of Si, the IP increased 3 h for lsi1 but the RIE, AUBSPC, FLS, r, and AULEPC were reduced by only 40, 50, 12, 21, and 12%, respectively. The correlation between Si leaf content and IP was significantly positive but Si content was negatively correlated with RIE, AUBSPC, FLS, r, and AULEPC. Single degree-of-freedom contrasts showed that Oochikara and lsi1 supplied with Si were significantly different from those not supplied with Si for all components of resistance evaluated. This result showed that a reduced Si content in tissues of plants from lsi1 dramatically affected

  11. Genome-wide SNP identification and QTL mapping for black rot resistance in cabbage

    OpenAIRE

    Lee, Jonghoon; Izzah, Nur Kholilatul; Jayakodi, Murukarthick; Perumal, Sampath; Joh, Ho Jun; Lee, Hyeon Ju; Lee, Sang-Choon; Park, Jee Young; Yang, Ki-Woung; Nou, Il-Sup; Seo, Joodeok; Yoo, Jaeheung; Suh, Youngdeok; Ahn, Kyounggu; Lee, Ji Hyun

    2015-01-01

    Background Black rot is a destructive bacterial disease causing large yield and quality losses in Brassica oleracea. To detect quantitative trait loci (QTL) for black rot resistance, we performed whole-genome resequencing of two cabbage parental lines and genome-wide SNP identification using the recently published B. oleracea genome sequences as reference. Results Approximately 11.5 Gb of sequencing data was produced from each parental line. Reference genome-guided mapping and SNP calling rev...

  12. Pectobacterium carotovorum subsp. carotovorum – the causal agent of broccoli soft rot in Serbia

    OpenAIRE

    Katarina Gašić; Veljko Gavrilović; Nenad Dolovac; Nenad Trkulja; Svetlana Živković; Danijela Ristić; Aleksa Obradović

    2014-01-01

    Soft rot symptoms were observed on broccoli plants in several commercial fields in the western part of Serbia. Six strains of bacteria were isolated from diseased tissues and identified as Pectobacterium carotovorum subsp. carotovorum using conventional bacteriological and molecular methods. All strains were non-fluorescent, gram-negative, facultative anaerobes, oxidase-negative and catalase-positive, causing soft rot on potato and carrot slices and did not...

  13. The role of secretion systems and small molecules in soft-rot enterobacteriaceae pathogenicity

    OpenAIRE

    Charkowski, Amy; Blanco, Carlos; Condemine, Guy; Expert, Dominique; Franza, Thierry; Hayes, Christopher; Hugouvieux-Cotte-Pattat, Nicole; Lopez Solanilla, Emilia; Low, David; Moleleki, Lucy; Pirhonen, Minna; Pitman, Andrew; Perna, Nicole; Reverchon, Sylvie; Rodriguez Palenzuela, Pablo

    2012-01-01

    Soft-rot Enterobacteriaceae (SRE), which belong to the genera Pectobacterium and Dickeya, consist mainly of broad host-range pathogens that cause wilt, rot, and blackleg diseases on a wide range of plants. They are found in plants, insects, soil, and water in agricultural regions worldwide. SRE encode all six known protein secretion systems present in gram-negative bacteria, and these systems are involved in attacking host plants and competing bacteria. They also produce and detect multiple t...

  14. Interrelationship of the soft rot phytopathogens in the Pectobacterium genus and Caenorhabditis elegans

    OpenAIRE

    Fang, Xin

    2012-01-01

    Bacterial soft rot is one of the most serious diseases affecting potatoes in fields and storages worldwide. Soft rot on potatoes and other crops are caused mainly by Pectobacterium atrosepticum, Pectobacterium carotovorum and several Dickeya species. The disease spreads via many ways and insects are suggested to be important agents in the epidemiology. Evolutionary and geological evidences suggest soil nematodes play essential roles in ecological processes including nutrients cycling, decompo...

  15. Isolation, Characterization, and Identification of Biological Control Agent for Potato Soft Rot in Bangladesh

    OpenAIRE

    Rahman, M.M.; M. E. Ali; Khan, A. A.; Akanda, A. M.; Uddin, Md. Kamal; Hashim, U.; Abd Hamid, S. B.

    2012-01-01

    A total of 91 isolates of probable antagonistic bacteria of potato soft rot bacterium Erwinia carotovora subsp. carotovora (Ecc) were extracted from rhizospheres and endophytes of various crop plants, different soil varieties, and atmospheres in the potato farming areas of Bangladesh. Antibacterial activity of the isolated probable antagonistic bacteria was tested in vitro against the previously identified most common and most virulent soft rot causing bacterial strain Ecc P-138. Only two iso...

  16. First Report of Sclerotinia White Rot Caused by Sclerotinia nivalis on Panax ginseng in Korea

    OpenAIRE

    Hye Sun Cho; Jeong-Sup Shin; Jae-Hyun Kim; Tae-Kyun Hong; Dae-Hui Cho; Je Yong Kang

    2013-01-01

    Sclerotinia white rot disease was observed on 5 and 6-year-old ginseng (Panax ginseng) roots in Hongchun,Cheorwon, and Yanggu, Gangwon Province, Korea from 2006 to 2010. Symptoms included a brownishwatery soft rot of the roots, and black sclerotia were often found on the rotten roots. The causal agent of thedisease was identified as Sclerotinia nivalis based on cultural characteristics and sequence analyses of theinternal transcribed spacer region of rDNA and β-tubulin gene with 100% sequence...

  17. Lettuce genotype resistance to "soft rot" caused by Pectobacterium carotovorum subsp. carotovorum

    OpenAIRE

    Kátia Cilene da Silva Felix; Willams José de Oliveira; Rosa de Lima Ramos Mariano; Elineide Barbosa de Souza

    2014-01-01

    Soft rot, caused by Pectobacterium carotovorum subsp. carotovorum (Pcc), is the main bacterial disease affecting lettuce (Lactuca sativa L.) crops in Brazil and leads to significant yield losses. This study aimed to assess the reaction of lettuce genotypes to soft rot induced by a virulent isolate and the stability of the resistance to three isolates varying in virulence. Using a descriptive ordinal scale ranging from 1 to 9 a classification system was defined: class 1 = resistant (R): severi...

  18. Zwalczanie zgnilizny powodowanej przez grzyby z rodzaju Penicillium [Control of Penicillium apple rot

    Directory of Open Access Journals (Sweden)

    H. Borecka

    2015-06-01

    Full Text Available Control of Pezicula spp. fungi reduced Penicillium apple rot. The Penicillium apple rot process began slowly under the modified atmosphere of 5% CO2 and 3% O2. The lower concentration of Benlate – 0.05% did not influence this fungicide's effectiveness, The lower concentration– 0.05% of Topsin M decreased the effectiveness of this fungicide. The resistant strains of Penicillium spp. to benzimidazole fungicides under laboratory conditions were obtained.

  19. Selection of Yeasts Antagonists as Biocontrol Agent of Mango Fruit Rot caused by Botryodiplodia theobromae

    OpenAIRE

    DWI SUGIPRIHATINI; SURYO WIYONO; WIDODO

    2011-01-01

    Fruit rot caused by Botryodiplodia theobromae is one of the most important post harvest disease of mango in Indonesia. Study on biological control on the disease is required to develop environmentally-sound control technology. The research objectives were to study the potency of yeasts in controlling post harvest mango disease i.e. fruit rot caused by B. theobromae and mechanism involve in the biocontrol. Total yeast isolates used for screening were twenty one, four from collection of Plant ...

  20. CONTROL OF POSTHARVEST TOMATO ROT BY SPORE SUSPENSION AND ANTIFUNGAL METABOLITES OF TRICHODERMA HARZIANUM

    OpenAIRE

    El-Katatny, Momein H.; Abeer S. Emam

    2012-01-01

    Rot of cherry tomato (Lycopersicon esculentum) fruits caused by several fungal pathogens is a detrimental disease leading to substantial yield loses worldwide. Alternaria isolates were the most common fungal species isolated from healthy or rotten fruits. Trichoderma harzianum spore suspension and culture filtrate were tested for their antagonistic activity on controlling tomato fruit rot. T. harzianum isolates suppressed or interfered with the growth of different postharvest tomato fungal pa...